Query psy14896
Match_columns 813
No_of_seqs 478 out of 3653
Neff 10.7
Searched_HMMs 29240
Date Fri Aug 16 23:34:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14896.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14896hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 100.0 1.5E-66 5.1E-71 588.1 48.2 508 187-810 3-527 (570)
2 1e07_A Carcinoembryonic antige 100.0 2.2E-63 7.6E-68 572.8 55.2 565 192-813 2-611 (642)
3 3dmk_A DOWN syndrome cell adhe 100.0 1.2E-62 4.2E-67 582.9 48.6 574 187-802 36-755 (816)
4 3b43_A Titin; I-SET IG fold, e 100.0 1.1E-62 3.9E-67 556.4 43.7 501 132-759 53-569 (570)
5 1e07_A Carcinoembryonic antige 100.0 1.2E-60 4E-65 550.1 52.5 537 141-760 72-640 (642)
6 3dmk_A DOWN syndrome cell adhe 100.0 1.3E-59 4.6E-64 556.9 44.1 569 141-762 200-811 (816)
7 3v2a_R Vascular endothelial gr 100.0 1.6E-56 5.5E-61 528.3 12.0 579 141-766 87-762 (772)
8 3v2a_R Vascular endothelial gr 100.0 4.2E-55 1.4E-59 516.2 10.0 568 189-810 31-715 (772)
9 2ec8_A MAST/stem cell growth f 100.0 3.4E-51 1.2E-55 459.1 32.6 450 188-766 35-516 (524)
10 2ocw_A Polymeric-immunoglobuli 100.0 2E-48 6.9E-53 443.3 44.2 465 195-764 6-550 (585)
11 3qs9_E FL cytokine receptor; i 100.0 3.4E-49 1.2E-53 437.1 28.8 438 197-764 56-514 (527)
12 1z7z_I Intercellular adhesion 100.0 9.2E-49 3.1E-53 430.8 29.9 429 192-761 2-450 (450)
13 3kld_A Contactin 4, axcam, BIG 100.0 4.4E-48 1.5E-52 414.8 28.8 377 188-662 4-382 (384)
14 2ec8_A MAST/stem cell growth f 100.0 3E-47 1E-51 427.1 26.3 406 276-802 18-447 (524)
15 2rcj_C Light chain; immunoglob 100.0 1.2E-45 4.2E-50 413.9 36.1 455 194-748 5-512 (523)
16 3qs9_E FL cytokine receptor; i 100.0 1.9E-46 6.5E-51 415.1 26.3 383 302-802 55-448 (527)
17 1cs6_A Axonin-1; neural cell a 100.0 1.6E-44 5.3E-49 388.1 31.7 373 188-662 3-381 (382)
18 2rcj_C Light chain; immunoglob 100.0 3E-44 1E-48 402.6 34.8 418 302-806 7-472 (523)
19 3qs7_E FL cytokine receptor; i 100.0 2E-45 6.7E-50 396.4 22.5 391 265-764 3-418 (423)
20 3p3y_A Neurofascin; IG domains 100.0 6E-44 2.1E-48 386.9 30.9 381 187-662 14-402 (404)
21 3kld_A Contactin 4, axcam, BIG 100.0 3.1E-44 1.1E-48 384.9 26.7 332 462-811 5-345 (384)
22 2v5m_A Dscam; neurobiology SPL 100.0 3E-43 1E-47 379.0 32.8 370 189-661 3-387 (388)
23 3laf_A Deleted in colorectal c 100.0 1E-43 3.5E-48 384.9 27.7 368 298-762 24-403 (403)
24 1bih_A Hemolin; insect immunit 100.0 1.3E-43 4.4E-48 382.9 27.6 376 186-661 3-394 (395)
25 3laf_A Deleted in colorectal c 100.0 2.2E-42 7.7E-47 374.3 32.7 375 189-665 21-403 (403)
26 1bih_A Hemolin; insect immunit 100.0 2.9E-42 1E-46 372.3 25.7 373 291-758 2-394 (395)
27 2ocw_A Polymeric-immunoglobuli 100.0 1.2E-40 4.2E-45 379.1 39.1 410 302-805 7-490 (585)
28 3p3y_A Neurofascin; IG domains 100.0 2.7E-42 9.4E-47 373.8 23.0 368 292-760 13-403 (404)
29 1z7z_I Intercellular adhesion 100.0 5.3E-42 1.8E-46 376.9 24.4 380 300-804 4-413 (450)
30 1cs6_A Axonin-1; neural cell a 100.0 1.1E-40 3.6E-45 358.2 30.4 329 462-810 4-343 (382)
31 2v5m_A Dscam; neurobiology SPL 100.0 1.8E-40 6.2E-45 357.3 30.9 321 480-812 17-359 (388)
32 3qs7_E FL cytokine receptor; i 100.0 3.3E-41 1.1E-45 363.4 24.2 350 359-806 3-371 (423)
33 1wio_A CD4, T-cell surface gly 100.0 6.1E-38 2.1E-42 333.7 24.7 313 305-759 4-362 (363)
34 1wio_A CD4, T-cell surface gly 100.0 4.9E-36 1.7E-40 319.0 20.2 286 480-812 7-334 (363)
35 1qgc_4 Protein (immunoglobulin 100.0 3.4E-35 1.2E-39 321.6 24.4 378 192-650 4-429 (438)
36 2rik_A Titin; I-SET IG fold, p 100.0 3.5E-34 1.2E-38 293.7 29.3 258 480-759 18-283 (284)
37 2yd9_A Receptor-type tyrosine- 100.0 1.9E-34 6.6E-39 298.6 26.4 264 480-767 19-298 (304)
38 1qz1_A Neural cell adhesion mo 100.0 1.5E-34 5E-39 297.7 25.3 263 480-760 15-290 (291)
39 1qgc_4 Protein (immunoglobulin 100.0 1E-35 3.4E-40 325.8 17.1 366 303-757 9-436 (438)
40 2wim_A N-CAM 2, NCAM2, neural 100.0 7.5E-34 2.6E-38 292.4 28.7 263 480-762 17-286 (291)
41 1qz1_A Neural cell adhesion mo 100.0 1.3E-32 4.6E-37 283.0 26.4 279 189-566 2-289 (291)
42 2rik_A Titin; I-SET IG fold, p 100.0 4.8E-32 1.6E-36 277.7 28.5 274 188-566 4-283 (284)
43 4fqp_A Poliovirus receptor; im 100.0 4.5E-33 1.5E-37 289.6 20.5 279 466-762 4-306 (313)
44 2yd9_A Receptor-type tyrosine- 100.0 5.4E-32 1.8E-36 280.2 27.6 232 188-442 5-248 (304)
45 2wim_A N-CAM 2, NCAM2, neural 100.0 9.5E-32 3.3E-36 276.6 27.8 278 189-569 4-286 (291)
46 2y25_A Myomesin; structural pr 100.0 1.5E-32 5E-37 286.6 19.1 266 480-761 19-316 (317)
47 1igt_B IGG2A intact antibody - 100.0 1.1E-32 3.6E-37 301.8 18.2 371 196-648 7-433 (444)
48 2o26_X MAST/stem cell growth f 100.0 2E-31 6.7E-36 274.0 26.0 247 480-762 25-290 (290)
49 1itb_B Type 1 interleukin-1 re 100.0 1.1E-32 3.8E-37 287.1 15.2 264 480-760 18-314 (315)
50 1igt_B IGG2A intact antibody - 100.0 5.3E-32 1.8E-36 296.3 20.9 313 480-805 13-392 (444)
51 4fom_A Poliovirus receptor-rel 100.0 2.1E-32 7.3E-37 283.9 14.3 272 480-763 12-303 (308)
52 1igy_B IGG1 intact antibody MA 100.0 2.5E-32 8.6E-37 297.7 15.3 356 302-748 6-423 (434)
53 3oq3_B IFN-alpha/beta binding 100.0 2.1E-31 7.2E-36 278.8 21.6 260 480-759 42-329 (329)
54 1iga_A IGA1; immunoglobulin; N 100.0 2E-30 6.7E-35 286.1 29.5 359 302-749 8-443 (475)
55 1hzh_H IGG, immunoglobulin hea 100.0 9.7E-32 3.3E-36 295.2 16.7 365 196-648 7-442 (457)
56 1ry7_B FGFR-3, fibroblast grow 100.0 8.8E-32 3E-36 282.9 14.9 264 480-763 21-330 (334)
57 1igy_B IGG1 intact antibody MA 100.0 1.3E-32 4.3E-37 300.1 6.9 372 196-649 6-424 (434)
58 4dep_C Interleukin-1 receptor 100.0 6.9E-31 2.4E-35 277.8 19.9 277 480-765 20-339 (349)
59 3o4o_C Interleukin-1 receptor 100.0 3.2E-31 1.1E-35 279.1 15.9 279 464-759 20-334 (339)
60 1hzh_H IGG, immunoglobulin hea 100.0 7.2E-31 2.4E-35 288.3 18.9 320 480-806 13-402 (457)
61 4fqp_A Poliovirus receptor; im 100.0 6.8E-30 2.3E-34 265.5 24.1 281 192-570 3-307 (313)
62 3ejj_X Macrophage colony-stimu 100.0 3.6E-30 1.2E-34 264.5 21.2 255 480-764 17-285 (289)
63 2y25_A Myomesin; structural pr 100.0 1.9E-30 6.3E-35 270.6 19.0 170 188-377 6-190 (317)
64 1iga_A IGA1; immunoglobulin; N 100.0 2.3E-29 8E-34 277.4 28.1 320 480-805 14-396 (475)
65 2y23_A Myomesin; structural pr 100.0 3.1E-30 1E-34 268.3 19.1 259 480-759 14-311 (312)
66 2o26_X MAST/stem cell growth f 100.0 4.7E-29 1.6E-33 256.2 27.5 272 188-569 11-290 (290)
67 2oz4_A Intercellular adhesion 100.0 1.1E-29 3.7E-34 257.0 21.3 243 479-761 15-265 (265)
68 3o4o_C Interleukin-1 receptor 100.0 3.5E-30 1.2E-34 271.2 17.7 238 188-442 17-273 (339)
69 3u83_A Poliovirus receptor-rel 100.0 5.3E-30 1.8E-34 268.9 18.9 268 480-764 27-324 (331)
70 1itb_B Type 1 interleukin-1 re 100.0 6.9E-30 2.4E-34 265.9 19.3 286 198-565 14-312 (315)
71 3rjd_A High affinity immunoglo 100.0 3E-29 1E-33 253.5 22.1 239 480-759 14-261 (262)
72 3rjd_A High affinity immunoglo 100.0 6E-29 2E-33 251.3 22.5 248 189-557 1-250 (262)
73 1ry7_B FGFR-3, fibroblast grow 100.0 9.2E-30 3.1E-34 267.4 14.1 279 301-665 14-329 (334)
74 4fom_A Poliovirus receptor-rel 100.0 2.7E-29 9.1E-34 260.5 16.8 275 198-570 8-303 (308)
75 3oq3_B IFN-alpha/beta binding 100.0 4.4E-28 1.5E-32 253.5 24.0 219 197-440 37-273 (329)
76 2wng_A Tyrosine-protein phosph 100.0 8.1E-29 2.8E-33 259.2 17.2 265 480-758 16-318 (327)
77 4dkd_C Macrophage colony-stimu 100.0 7.1E-29 2.4E-33 255.3 16.1 252 480-763 17-284 (292)
78 3ejj_X Macrophage colony-stimu 100.0 6.7E-28 2.3E-32 247.5 23.3 276 189-569 4-283 (289)
79 3mjg_X Beta-type platelet-deri 100.0 7.4E-28 2.5E-32 247.2 23.0 218 529-767 51-285 (289)
80 3vh8_G Killer cell immunoglobu 100.0 2.3E-28 7.9E-33 254.2 19.1 260 480-763 36-316 (316)
81 1zvo_C Myeloma immunoglobulin 100.0 5.7E-27 2E-31 259.7 30.6 370 302-760 7-505 (512)
82 3u83_A Poliovirus receptor-rel 100.0 1.8E-27 6.1E-32 249.6 22.8 279 190-570 15-323 (331)
83 1zvo_C Myeloma immunoglobulin 100.0 1.2E-26 4.3E-31 257.0 29.9 399 195-649 6-492 (512)
84 2wng_A Tyrosine-protein phosph 100.0 3.3E-28 1.1E-32 254.5 15.9 270 302-651 10-310 (327)
85 2oz4_A Intercellular adhesion 100.0 1.2E-27 4E-32 242.0 18.4 199 209-438 18-224 (265)
86 4dep_C Interleukin-1 receptor 100.0 1E-27 3.4E-32 253.5 17.1 220 576-804 15-273 (349)
87 3vh8_G Killer cell immunoglobu 99.9 2.4E-27 8.2E-32 246.6 19.4 226 188-441 23-259 (316)
88 4dkd_C Macrophage colony-stimu 99.9 9.1E-27 3.1E-31 239.4 19.5 272 188-568 3-282 (292)
89 2y23_A Myomesin; structural pr 99.9 3.3E-27 1.1E-31 245.4 15.6 217 578-810 11-271 (312)
90 2jll_A NCAM2, neural cell adhe 99.9 3.1E-25 1E-29 238.3 31.3 357 189-652 1-377 (389)
91 3mjg_X Beta-type platelet-deri 99.9 1.8E-26 6E-31 236.9 20.4 261 302-667 7-282 (289)
92 2nzi_A Titin; IG-domain, FNIII 99.9 1.8E-25 6.3E-30 231.2 27.8 265 188-557 3-281 (305)
93 2jll_A NCAM2, neural cell adhe 99.9 3.7E-25 1.3E-29 237.7 26.2 285 480-784 13-314 (389)
94 2nzi_A Titin; IG-domain, FNIII 99.9 3.9E-25 1.3E-29 228.8 21.4 247 465-751 7-281 (305)
95 2wqr_A IG epsilon chain C regi 99.9 2.1E-26 7.3E-31 240.0 9.8 249 483-749 25-309 (323)
96 1za6_B IGG heavy chain; immuno 99.9 1.1E-24 3.6E-29 229.3 16.8 256 480-749 13-330 (344)
97 2j8h_A Titin, connectin; cardi 99.9 7.1E-25 2.4E-29 210.6 14.0 185 568-760 4-197 (197)
98 2py2_A Antifreeze protein type 99.9 6.2E-25 2.1E-29 195.2 12.3 128 27-161 2-129 (136)
99 3rbs_A Myomesin-1; immunoglobu 99.9 7.6E-25 2.6E-29 210.8 13.4 175 577-759 11-206 (207)
100 3vpp_A C-type lectin domain fa 99.9 8.4E-25 2.9E-29 193.9 12.7 126 26-160 1-126 (132)
101 2v5t_A NCAM2, N-CAM 2, neural 99.9 1.3E-24 4.4E-29 207.3 13.9 184 569-760 3-188 (189)
102 3bx4_B Aggretin beta chain; to 99.9 5.3E-25 1.8E-29 198.8 10.0 120 28-160 24-145 (146)
103 3lcy_A Titin; A-BAND, IG tande 99.9 2E-24 6.7E-29 207.6 13.9 185 566-761 5-197 (197)
104 2iep_A Muscle-specific kinase 99.9 1E-24 3.6E-29 208.5 11.2 185 566-762 5-192 (192)
105 2wqr_A IG epsilon chain C regi 99.9 1.9E-24 6.5E-29 225.2 13.3 216 210-442 25-264 (323)
106 1qdd_A Lithostathine; pancreat 99.9 4.9E-24 1.7E-28 192.3 14.0 132 25-160 10-143 (144)
107 2yd1_A Tyrosine-protein phosph 99.9 3.5E-24 1.2E-28 208.4 14.1 192 567-763 5-203 (212)
108 2a38_A Titin; Z1Z2, structural 99.9 2.7E-24 9.3E-29 206.0 12.4 184 567-759 4-194 (194)
109 2iep_A Muscle-specific kinase 99.9 1.2E-23 4.1E-28 201.1 16.5 186 186-391 4-191 (192)
110 1gz2_A Ovocleidin-17, OC-17 ov 99.9 4E-24 1.4E-28 192.6 11.3 130 26-160 2-141 (142)
111 2c5d_C AXL oncogene, tyrosine- 99.9 8.6E-24 2.9E-28 202.6 14.3 178 568-758 2-191 (195)
112 2yd6_A PTPRD protein; hydrolas 99.9 6.3E-24 2.1E-28 206.5 12.4 192 566-764 4-208 (212)
113 1uv0_A Pancreatitis-associated 99.9 1.2E-23 4E-28 191.1 13.4 132 25-160 10-148 (149)
114 2kv3_A Regenerating islet-deri 99.9 4.9E-24 1.7E-28 188.9 10.6 127 28-160 2-130 (131)
115 1tdq_B Aggrecan core protein; 99.9 9E-24 3.1E-28 186.8 12.1 124 26-159 4-129 (130)
116 3s97_C Contactin-1; carbonic a 99.9 2.3E-23 7.8E-28 200.8 16.0 185 575-760 15-201 (201)
117 2c6u_A CLEC1B protein; lectin, 99.9 5E-24 1.7E-28 185.6 10.2 119 28-160 2-120 (122)
118 1tn3_A Tetranectin; plasminoge 99.9 4.7E-24 1.6E-28 190.7 10.2 128 27-160 4-135 (137)
119 2ox9_A Collectin placenta 1; C 99.9 1.5E-23 5.1E-28 187.8 13.2 124 27-160 3-131 (140)
120 1ypq_A Oxidised low density li 99.9 1.1E-23 3.6E-28 187.5 12.0 127 25-160 5-132 (135)
121 2vr9_A Roundabout 1, ROBO; imm 99.9 5.2E-23 1.8E-27 201.0 17.6 180 188-379 8-198 (217)
122 4fa8_A Secreted protein BARF1; 99.9 7.6E-24 2.6E-28 202.4 11.2 164 578-753 3-195 (203)
123 1jwi_B Platelet aggregation in 99.9 1E-23 3.4E-28 184.7 11.0 121 27-160 2-124 (125)
124 1jzn_A Galactose-specific lect 99.9 1.6E-23 5.6E-28 186.7 12.4 129 28-160 2-134 (135)
125 2e3x_C Coagulation factor X-ac 99.9 1.3E-23 4.5E-28 183.2 11.3 119 28-159 2-122 (122)
126 3rs1_A C-type lectin domain fa 99.9 2.4E-23 8.1E-28 181.3 12.8 118 25-160 4-121 (122)
127 1wmz_A Lectin CEL-I, N-acetyl- 99.9 1.2E-23 4E-28 188.7 11.2 128 28-160 2-138 (140)
128 2yd1_A Tyrosine-protein phosph 99.9 1E-22 3.5E-27 198.0 18.7 184 188-391 5-201 (212)
129 1dv8_A Asialoglycoprotein rece 99.9 2.8E-23 9.7E-28 182.9 13.4 119 29-160 1-127 (128)
130 2wv3_A Neuroplastin; igcam, me 99.9 2.6E-23 9E-28 198.3 14.0 165 578-759 12-189 (190)
131 2v9r_A Roundabout homolog 1; p 99.9 1.8E-23 6.2E-28 203.4 12.8 193 567-769 8-211 (212)
132 1ukm_B EMS16 B chain, EMS16 su 99.9 2.5E-23 8.6E-28 183.2 12.4 121 29-160 1-123 (128)
133 3g8k_A Lectin-related NK cell 99.9 1.6E-23 5.5E-28 185.0 11.1 119 28-160 6-124 (130)
134 1za6_B IGG heavy chain; immuno 99.9 1.3E-23 4.6E-28 220.8 12.4 220 576-806 8-289 (344)
135 2bpd_A Dectin-1; receptor, bet 99.9 2.3E-23 7.9E-28 186.6 12.0 126 26-160 14-141 (142)
136 1oz7_B Echicetin B-chain; plat 99.9 1.6E-23 5.4E-28 183.1 10.6 120 28-160 1-122 (123)
137 2a38_A Titin; Z1Z2, structural 99.9 9.3E-23 3.2E-27 195.3 17.0 182 188-388 4-193 (194)
138 3bx4_A Aggretin alpha chain; t 99.9 1.8E-23 6.1E-28 186.4 11.1 125 27-160 3-134 (136)
139 3ubu_A Agglucetin subunit alph 99.9 2.1E-23 7.2E-28 184.8 11.4 124 28-160 3-130 (131)
140 1rhf_A Tyrosine-protein kinase 99.9 3.1E-23 1.1E-27 196.3 13.2 172 570-759 4-182 (182)
141 2yd6_A PTPRD protein; hydrolas 99.9 8.9E-23 3E-27 198.3 16.7 189 188-393 5-207 (212)
142 3c22_A C-type lectin domain fa 99.9 3.2E-23 1.1E-27 189.2 12.7 128 25-160 19-150 (156)
143 1f97_A Junction adhesion molec 99.9 4.2E-23 1.4E-27 200.8 14.4 177 573-760 6-207 (212)
144 1epf_A NCAM, protein (neural c 99.9 1.4E-22 4.9E-27 193.4 17.8 172 189-376 2-180 (191)
145 2va4_A NCAM2, N-CAM 2, neural 99.9 4E-23 1.4E-27 197.5 13.8 167 578-759 14-192 (192)
146 2v9r_A Roundabout homolog 1; p 99.9 1.1E-22 3.7E-27 197.9 17.2 194 188-394 8-206 (212)
147 1sb2_A Rhodocetin alpha subuni 99.9 4.1E-23 1.4E-27 183.5 12.6 124 28-160 1-130 (133)
148 2afp_A Protein (SEA raven type 99.9 2.7E-24 9.3E-29 189.8 5.0 126 25-160 3-128 (129)
149 2zib_A Type II antifreeze prot 99.9 4.1E-23 1.4E-27 182.3 12.5 125 26-160 7-131 (133)
150 2b6b_D CD209 antigen; cryo EM 99.9 5.5E-23 1.9E-27 190.1 13.8 129 23-160 21-151 (175)
151 1ukm_A EMS16 A chain, EMS16 su 99.9 2.7E-23 9.3E-28 184.9 11.3 125 27-160 2-132 (134)
152 2v44_A NCAM2, neural cell adhe 99.9 7E-23 2.4E-27 195.2 15.0 171 574-758 8-185 (189)
153 3kqg_A Langerin, C-type lectin 99.9 3.8E-23 1.3E-27 194.1 12.8 126 27-160 47-176 (182)
154 1fvu_B Botrocetin beta chain; 99.9 1.3E-23 4.6E-28 184.2 9.2 122 28-160 1-124 (125)
155 1umr_C Convulxin beta, CVX bet 99.9 2.3E-23 7.8E-28 182.6 10.5 121 27-160 2-124 (125)
156 2r15_A Myomesin-1; sarcomeric 99.9 5.9E-23 2E-27 199.8 14.5 169 581-761 15-211 (212)
157 2ifg_A High affinity nerve gro 99.9 1.1E-24 3.8E-29 229.2 2.3 200 541-762 136-347 (347)
158 2v44_A NCAM2, neural cell adhe 99.9 2.5E-22 8.7E-27 191.3 18.6 169 191-377 4-177 (189)
159 1sl6_A C-type lectin DC-signr; 99.9 7E-23 2.4E-27 191.6 14.3 127 25-160 49-177 (184)
160 1fvu_A Botrocetin alpha chain; 99.9 2.2E-23 7.6E-28 185.1 10.3 124 28-160 1-131 (133)
161 1egg_A Macrophage mannose rece 99.9 3.7E-23 1.3E-27 187.4 11.9 129 27-160 3-139 (147)
162 2j8h_A Titin, connectin; cardi 99.9 2.1E-22 7.2E-27 193.3 17.8 180 188-389 3-196 (197)
163 1j34_B Coagulation factor IX-b 99.9 1.9E-23 6.5E-28 182.6 9.3 120 28-160 1-122 (123)
164 2vuv_A Codakine; sugar-binding 99.9 3.7E-23 1.3E-27 182.3 11.2 123 28-160 1-127 (129)
165 3ojm_B Fibroblast growth facto 99.9 8.6E-23 2.9E-27 201.6 15.1 184 576-766 27-227 (231)
166 3ubu_B Agglucetin subunit beta 99.9 5.1E-23 1.8E-27 180.9 11.9 122 27-160 2-125 (126)
167 3bdw_A Natural killer cells an 99.9 1.2E-23 4E-28 183.6 7.5 120 26-160 2-121 (123)
168 1c3a_B Flavocetin-A: beta subu 99.9 2.2E-23 7.7E-28 182.7 9.4 121 27-160 2-124 (125)
169 3jz7_A MCAR, CAR, coxsackievir 99.9 1E-22 3.6E-27 198.3 15.2 174 577-762 9-214 (214)
170 2c5d_C AXL oncogene, tyrosine- 99.9 3E-22 1E-26 191.8 18.1 185 189-388 2-191 (195)
171 1c3a_A Flavocetin-A: alpha sub 99.9 4.3E-23 1.5E-27 183.8 11.0 125 27-160 2-132 (135)
172 1jwi_A Bitiscetin; domain swap 99.9 3.6E-23 1.2E-27 183.2 10.4 122 28-160 3-128 (131)
173 1hq8_A NKG2-D; homodimer, CIS- 99.9 1.6E-23 5.6E-28 182.5 8.0 120 25-160 2-121 (123)
174 2h2t_B Low affinity immunoglob 99.9 4.2E-23 1.4E-27 191.7 11.1 125 25-160 13-139 (175)
175 1oz7_A Echicetin A-chain; plat 99.9 4.7E-23 1.6E-27 182.5 10.9 123 28-160 1-128 (131)
176 3grw_A Fibroblast growth facto 99.9 1.8E-22 6E-27 200.8 16.4 185 577-768 24-226 (241)
177 1htn_A Tetranectin; plasminoge 99.9 3.7E-23 1.3E-27 193.4 10.8 128 27-160 49-180 (182)
178 2xr6_A CD209 antigen; sugar bi 99.9 7.2E-23 2.4E-27 189.3 12.5 130 23-161 16-147 (170)
179 1j34_A Coagulation factor IX-b 99.9 4.2E-23 1.4E-27 182.4 10.4 123 28-159 1-129 (129)
180 3bdw_B NKG2-A/NKG2-B type II i 99.9 6.8E-23 2.3E-27 177.8 11.3 117 25-159 3-119 (120)
181 2x1w_L Vascular endothelial gr 99.9 1.2E-22 4.2E-27 197.3 14.4 179 576-765 15-212 (213)
182 1sb2_B Rhodocetin beta subunit 99.9 9E-23 3.1E-27 179.7 12.0 121 27-160 2-126 (129)
183 1umr_A Convulxin alpha, CVX al 99.9 3.9E-23 1.3E-27 184.0 9.7 125 27-160 2-132 (135)
184 1epf_A NCAM, protein (neural c 99.9 2.3E-22 8E-27 191.9 15.8 176 571-758 5-189 (191)
185 2yhf_A C-type lectin domain fa 99.9 7.7E-23 2.6E-27 177.0 11.2 117 28-160 1-117 (118)
186 3gpr_D Rhodocetin subunit delt 99.9 1.1E-23 3.9E-28 184.3 5.9 121 29-160 1-123 (124)
187 3r4d_A CEA-related cell adhesi 99.9 3.4E-22 1.2E-26 193.7 16.9 180 575-765 6-205 (208)
188 3gpr_C Rhodocetin subunit gamm 99.9 2E-23 6.7E-28 185.6 7.4 124 28-160 2-131 (134)
189 1uct_A Immunoglobulin alpha FC 99.9 1.8E-22 6.2E-27 196.1 14.7 183 569-762 10-200 (218)
190 3m9z_A Killer cell lectin-like 99.9 6.2E-23 2.1E-27 183.6 10.5 124 26-161 3-126 (139)
191 1f97_A Junction adhesion molec 99.9 1.4E-21 4.6E-26 190.1 20.6 194 190-390 2-207 (212)
192 3alu_A Lectin CEL-IV, C-type; 99.9 5.2E-23 1.8E-27 188.1 9.5 129 27-160 3-150 (157)
193 2d3v_A Leukocyte immunoglobuli 99.9 8.1E-23 2.8E-27 195.8 11.3 170 568-748 5-180 (196)
194 3ff7_C Killer cell lectin-like 99.9 1.5E-22 5E-27 173.1 11.6 112 29-159 1-112 (112)
195 1mpu_A NKG2-D type II integral 99.9 3E-23 1E-27 184.8 7.5 120 25-160 17-136 (138)
196 2e3x_B Coagulation factor X-ac 99.9 4.8E-23 1.6E-27 183.2 8.8 124 28-160 2-131 (134)
197 1hup_A Mannose-binding protein 99.9 8.4E-23 2.9E-27 182.5 10.1 121 28-160 19-140 (141)
198 2ls8_A C-type lectin domain fa 99.8 2.5E-24 8.4E-29 196.3 0.0 128 28-161 2-130 (156)
199 1nbq_A JAM, junctional adhesio 99.9 4.9E-23 1.7E-27 199.9 9.1 176 573-759 9-208 (209)
200 4fa8_A Secreted protein BARF1; 99.9 1.4E-22 4.8E-27 193.6 11.8 167 208-377 7-192 (203)
201 2v5t_A NCAM2, N-CAM 2, neural 99.9 7.3E-22 2.5E-26 188.1 16.6 181 189-389 2-187 (189)
202 2gi7_A GPVI protein; IG-like d 99.9 3.3E-22 1.1E-26 189.2 14.0 161 568-748 8-168 (184)
203 3ff9_A Killer cell lectin-like 99.9 1.7E-22 5.7E-27 173.7 10.7 113 28-160 1-113 (115)
204 3p2t_A Leukocyte immunoglobuli 99.9 1.5E-22 5.3E-27 193.9 11.7 179 570-759 7-195 (196)
205 3k0w_A Mucosa-associated lymph 99.9 2E-22 6.7E-27 196.7 12.5 181 569-765 19-207 (218)
206 1ugn_A LIR1, leukocyte immunog 99.9 2.9E-22 1E-26 192.3 13.3 180 569-759 6-197 (198)
207 3sgj_C Human FCG3A receptor; r 99.9 2.7E-22 9.1E-27 192.9 12.9 165 571-763 10-177 (204)
208 1rtm_1 Mannose-binding protein 99.9 1.5E-22 5E-27 182.7 10.3 121 28-160 27-148 (149)
209 1f2q_A High affinity immunoglo 99.9 1.9E-22 6.6E-27 189.4 11.4 169 567-763 3-174 (176)
210 1hng_A CD2; T lymphocyte adhes 99.9 1E-22 3.5E-27 190.7 9.3 159 579-758 7-174 (176)
211 3lcy_A Titin; A-BAND, IG tande 99.9 1E-21 3.4E-26 188.6 16.6 179 188-389 6-195 (197)
212 3hup_A Early activation antige 99.9 5.6E-22 1.9E-26 174.6 13.4 117 25-160 12-128 (130)
213 1vca_A VCAM-D1,2, human vascul 99.9 3.7E-22 1.3E-26 191.5 13.2 169 580-763 13-200 (202)
214 1rhf_A Tyrosine-protein kinase 99.9 9.4E-22 3.2E-26 186.0 15.8 175 189-388 2-181 (182)
215 2vr9_A Roundabout 1, ROBO; imm 99.9 2.2E-22 7.7E-27 196.4 11.5 184 567-760 8-206 (217)
216 2wv3_A Neuroplastin; igcam, me 99.9 9.3E-22 3.2E-26 187.5 15.4 177 189-389 3-189 (190)
217 2ny1_B T-cell surface glycopro 99.9 5.6E-22 1.9E-26 187.9 13.7 160 578-763 5-182 (184)
218 1nbq_A JAM, junctional adhesio 99.9 2.1E-21 7.4E-26 188.2 17.9 194 189-389 4-208 (209)
219 3bp6_B Programmed cell death 1 99.9 2.7E-22 9.3E-27 193.3 11.5 173 576-762 10-195 (202)
220 1fm5_A Early activation antige 99.9 4.7E-22 1.6E-26 187.9 12.8 118 24-160 80-197 (199)
221 1buu_A Protein (mannose-bindin 99.9 2.7E-22 9.1E-27 184.5 9.5 121 28-160 46-167 (168)
222 1fnl_A Low affinity immunoglob 99.9 6.3E-22 2.2E-26 185.6 12.2 165 569-761 8-175 (175)
223 2c1o_A IGK-C protein; FAB frag 99.9 2.2E-22 7.7E-27 201.7 9.6 201 538-750 12-245 (254)
224 1oll_A NK receptor; immune sys 99.9 4.6E-22 1.6E-26 188.9 10.9 179 570-759 6-187 (188)
225 1fnl_A Low affinity immunoglob 99.9 3.7E-21 1.2E-25 180.4 16.9 167 189-390 7-174 (175)
226 3sgj_C Human FCG3A receptor; r 99.9 2.8E-21 9.7E-26 185.7 16.4 170 189-393 7-177 (204)
227 1f2q_A High affinity immunoglo 99.9 1.3E-21 4.5E-26 183.7 13.4 169 189-392 4-173 (176)
228 2fbo_J V1V2;, variable region- 99.9 6.9E-22 2.3E-26 197.8 12.0 178 576-758 10-250 (250)
229 3c8j_A Natural killer cell rec 99.9 2.5E-22 8.6E-27 190.0 8.3 122 25-160 76-197 (203)
230 3rbs_A Myomesin-1; immunoglobu 99.9 1.3E-21 4.3E-26 188.2 12.3 167 190-378 4-198 (207)
231 3k0w_A Mucosa-associated lymph 99.9 6.8E-21 2.3E-25 185.8 17.3 172 188-391 17-203 (218)
232 2va4_A NCAM2, N-CAM 2, neural 99.9 1E-20 3.5E-25 180.7 17.2 178 189-388 2-191 (192)
233 1jbj_A CD3 epsilon and gamma e 99.9 1E-21 3.4E-26 185.9 9.7 151 580-750 11-179 (186)
234 3mj6_A Junctional adhesion mol 99.9 3.6E-21 1.2E-25 194.7 14.3 194 573-780 10-258 (268)
235 1uct_A Immunoglobulin alpha FC 99.8 1.6E-20 5.5E-25 182.3 17.9 184 188-391 8-199 (218)
236 1b6u_A KIR2DL3, P58 killer cel 99.8 4.7E-21 1.6E-25 190.2 14.0 211 578-800 16-241 (257)
237 4i0k_A CD276 antigen; immunogl 99.8 9.4E-21 3.2E-25 185.6 14.9 181 576-767 3-213 (222)
238 3g8l_A Lectin-related NK cell 99.8 1.6E-21 5.6E-26 182.9 9.0 122 25-160 62-184 (190)
239 2d3v_A Leukocyte immunoglobuli 99.8 4.7E-21 1.6E-25 183.4 12.3 170 189-375 5-180 (196)
240 2msb_A Mannose-binding protein 99.8 6.2E-21 2.1E-25 163.9 11.8 113 36-160 1-114 (115)
241 3ry4_A Low affinity immunoglob 99.8 1E-20 3.5E-25 176.6 13.9 159 573-759 9-170 (170)
242 1oll_A NK receptor; immune sys 99.8 2.4E-20 8.2E-25 177.0 16.0 180 189-389 4-187 (188)
243 1ugn_A LIR1, leukocyte immunog 99.8 1.1E-20 3.6E-25 181.4 13.5 182 189-388 5-196 (198)
244 3ojm_B Fibroblast growth facto 99.8 2.7E-20 9.2E-25 183.6 16.7 190 188-393 14-224 (231)
245 3b5h_A Cervical EMMPRIN, HAB18 99.8 2E-20 6.7E-25 177.2 15.1 162 578-760 8-183 (184)
246 3p2t_A Leukocyte immunoglobuli 99.8 1.6E-20 5.5E-25 179.7 14.1 182 189-388 5-194 (196)
247 1wk1_A Hypothetical protein YK 99.8 6.7E-21 2.3E-25 172.5 10.3 119 35-160 2-130 (150)
248 2gi7_A GPVI protein; IG-like d 99.8 3.9E-20 1.3E-24 174.8 15.9 171 188-388 7-183 (184)
249 3jz7_A MCAR, CAR, coxsackievir 99.8 1.5E-20 5.3E-25 182.9 13.3 183 196-389 7-211 (214)
250 2if7_A SLAM family member 6; N 99.8 1.7E-20 5.9E-25 178.6 13.1 162 577-755 7-187 (193)
251 3ry4_A Low affinity immunoglob 99.8 2.5E-20 8.4E-25 174.0 13.5 165 189-388 4-169 (170)
252 3grw_A Fibroblast growth facto 99.8 5.2E-20 1.8E-24 182.9 16.5 189 189-393 11-221 (241)
253 1rdl_1 SUB-MBP-C, mannose-bind 99.8 2.9E-20 9.8E-25 159.1 12.6 111 38-160 1-112 (113)
254 1pwb_A SP-D, PSP-D, pulmonary 99.8 4.3E-21 1.5E-25 178.5 8.1 123 28-159 54-177 (177)
255 1vca_A VCAM-D1,2, human vascul 99.8 1.8E-20 6.3E-25 179.7 12.7 183 193-393 4-200 (202)
256 3sbw_C Programmed cell death 1 99.8 1.5E-20 5.3E-25 184.1 12.4 176 576-764 9-215 (222)
257 3pbf_A Pulmonary surfactant-as 99.8 1.7E-20 6E-25 169.3 11.5 122 29-159 27-148 (148)
258 3r4d_A CEA-related cell adhesi 99.8 1.6E-19 5.3E-24 174.9 19.0 186 196-393 6-203 (208)
259 3s97_C Contactin-1; carbonic a 99.8 4.8E-20 1.6E-24 177.4 14.8 176 194-389 13-200 (201)
260 1mq8_A ICAM-1, intercellular a 99.8 1.7E-20 5.7E-25 187.8 11.6 253 480-763 12-285 (291)
261 1h8u_A MBP, eosinophil granule 99.8 2.3E-20 7.9E-25 161.1 10.7 113 39-159 1-117 (117)
262 1hnf_A CD2; T lymphocyte adhes 99.8 5.9E-20 2E-24 171.7 14.3 159 578-757 9-178 (182)
263 1jbj_A CD3 epsilon and gamma e 99.8 2.5E-20 8.4E-25 176.3 11.9 140 209-376 14-178 (186)
264 1p6f_A NKP46, natural cytotoxi 99.8 2.4E-20 8.4E-25 183.7 11.8 183 569-762 8-193 (242)
265 4f80_A Butyrophilin subfamily 99.8 4.4E-20 1.5E-24 181.3 13.5 172 576-761 12-214 (226)
266 4frw_A Poliovirus receptor-rel 99.8 6.4E-20 2.2E-24 179.0 14.4 173 577-759 8-210 (218)
267 3mj8_L Stimulatory hamster ant 99.8 1.4E-20 4.7E-25 183.1 9.4 171 577-756 9-209 (213)
268 2ifg_A High affinity nerve gro 99.8 9.4E-21 3.2E-25 199.1 8.8 181 188-391 157-346 (347)
269 2pet_A Lutheran blood group gl 99.8 2.5E-20 8.4E-25 183.9 11.0 175 576-759 8-230 (231)
270 2r15_A Myomesin-1; sarcomeric 99.8 1E-19 3.4E-24 176.8 15.0 163 210-390 18-210 (212)
271 1b6u_A KIR2DL3, P58 killer cel 99.8 1.6E-19 5.5E-24 179.1 16.1 224 189-438 7-241 (257)
272 4f80_A Butyrophilin subfamily 99.8 2E-19 6.9E-24 176.5 16.5 179 199-389 14-212 (226)
273 2fbo_J V1V2;, variable region- 99.8 1.1E-19 3.7E-24 181.7 14.7 184 196-386 9-248 (250)
274 2x1w_L Vascular endothelial gr 99.8 9.7E-20 3.3E-24 176.8 13.9 182 194-393 12-210 (213)
275 1sy6_A T-cell surface glycopro 99.8 2.4E-20 8.3E-25 179.0 8.8 160 580-759 15-203 (204)
276 1hng_A CD2; T lymphocyte adhes 99.8 1.1E-19 3.7E-24 170.0 12.8 153 208-377 10-166 (176)
277 1byf_A TC14, protein (polyandr 99.8 8E-20 2.7E-24 159.7 11.0 115 37-160 1-122 (125)
278 2zg1_A Sialic acid-binding IG- 99.8 2.7E-19 9.1E-24 174.1 16.0 172 577-758 9-213 (214)
279 1dr9_A B7-1 (CD80), T lymphocy 99.8 9.1E-20 3.1E-24 175.4 12.3 170 578-756 4-197 (201)
280 3b5h_A Cervical EMMPRIN, HAB18 99.8 1E-19 3.5E-24 172.2 12.1 160 208-389 12-182 (184)
281 1nkr_A P58-CL42 KIR; inhibitor 99.8 3E-19 1E-23 171.5 14.8 158 578-746 17-183 (201)
282 1p6f_A NKP46, natural cytotoxi 99.8 6.6E-19 2.3E-23 173.4 17.3 184 189-393 7-194 (242)
283 2c1o_A IGK-C protein; FAB frag 99.8 1.3E-19 4.3E-24 181.6 12.2 208 147-375 11-243 (254)
284 1sy6_A T-cell surface glycopro 99.8 1.4E-19 4.9E-24 173.6 11.6 155 208-388 17-202 (204)
285 3d9a_L Light chain of hyhel10 99.8 9.5E-20 3.2E-24 177.1 9.8 172 576-755 9-208 (213)
286 3nl4_L Antigen binding fragmen 99.8 2.2E-19 7.5E-24 174.5 11.6 164 575-744 8-198 (213)
287 1lk3_L 9D7 light chain; antige 99.8 2.5E-19 8.5E-24 173.6 11.5 169 575-751 7-203 (210)
288 2ny1_B T-cell surface glycopro 99.8 1.3E-18 4.5E-23 164.5 15.1 161 209-392 10-181 (184)
289 1nkr_A P58-CL42 KIR; inhibitor 99.8 1.5E-18 5.3E-23 166.5 15.6 180 189-388 8-200 (201)
290 1f3r_B FV antibody fragment; I 99.8 4.5E-19 1.5E-23 177.6 11.7 186 577-763 9-248 (257)
291 3bp6_B Programmed cell death 1 99.8 1.5E-18 5.2E-23 167.0 14.6 160 197-378 10-184 (202)
292 2dru_A Chimera of CD48 antigen 99.8 7.4E-19 2.5E-23 164.7 11.0 155 577-756 8-177 (180)
293 1ccz_A Protein (CD58); LFA-3, 99.8 4.1E-19 1.4E-23 164.9 9.0 153 578-757 5-168 (171)
294 3d9a_L Light chain of hyhel10 99.8 6.5E-19 2.2E-23 171.2 10.6 178 192-375 4-201 (213)
295 1nqb_A Single-chain antibody f 99.8 1.9E-18 6.4E-23 172.8 13.9 178 576-762 8-235 (256)
296 3mj8_L Stimulatory hamster ant 99.8 1.5E-18 5E-23 168.6 12.5 179 191-376 3-202 (213)
297 3mj6_A Junctional adhesion mol 99.8 5.7E-18 2E-22 171.1 16.8 189 190-392 6-239 (268)
298 3eow_R Poliovirus receptor; im 99.8 1.6E-18 5.5E-23 169.4 12.2 170 577-758 8-210 (221)
299 4frw_A Poliovirus receptor-rel 99.8 2.5E-18 8.6E-23 167.6 13.5 175 195-378 5-202 (218)
300 1lk3_L 9D7 light chain; antige 99.8 1.9E-18 6.4E-23 167.4 12.3 177 192-375 4-200 (210)
301 3tv3_L PGT128 light chain, IG 99.8 4.3E-19 1.5E-23 172.1 7.7 167 577-755 9-206 (211)
302 3nl4_L Antigen binding fragmen 99.8 2.2E-18 7.5E-23 167.4 12.4 174 190-371 2-198 (213)
303 3pv7_A B7-H6, IG-like domain-c 99.8 1.5E-18 5.1E-23 173.1 11.4 175 577-765 12-230 (248)
304 1nfd_E H57 FAB; complex (immun 99.8 1.4E-19 4.6E-24 175.8 3.2 170 576-751 7-203 (212)
305 4fmk_A Poliovirus receptor-rel 99.8 2.9E-18 9.8E-23 168.1 12.7 185 197-390 9-219 (225)
306 1q0x_L FAB 9B1, light chain; a 99.8 1.2E-18 4.3E-23 169.0 9.6 169 575-754 7-209 (212)
307 3sbw_C Programmed cell death 1 99.8 5E-18 1.7E-22 166.1 13.7 182 197-392 9-213 (222)
308 2pet_A Lutheran blood group gl 99.8 3.2E-18 1.1E-22 168.6 12.3 172 195-373 6-211 (231)
309 1c1e_H Catalytic antibody 1E9 99.8 2.6E-18 8.9E-23 167.6 11.4 175 576-757 8-217 (219)
310 3esu_F Antibody 14B7* light ch 99.8 4.3E-17 1.5E-21 162.6 20.4 176 190-372 5-231 (250)
311 3auv_A SC-DSFV derived from th 99.7 1.9E-17 6.4E-22 167.7 17.8 196 189-391 12-255 (276)
312 2ghw_B Anti-SARS SCFV antibody 99.7 8.1E-18 2.8E-22 167.6 14.8 182 576-759 10-241 (247)
313 1mq8_A ICAM-1, intercellular a 99.7 4.5E-18 1.5E-22 170.2 12.5 221 193-444 3-236 (291)
314 3s96_B 3B5H10 FAB light chain; 99.7 9.1E-19 3.1E-23 170.8 7.2 172 577-754 9-214 (218)
315 3r06_A Anti-mouse CD3epsilon a 99.7 4.7E-18 1.6E-22 165.0 12.1 180 190-375 2-201 (213)
316 2xzc_L FAB A.17 light chain; i 99.7 5.5E-18 1.9E-22 165.0 12.4 170 576-752 8-207 (216)
317 3sob_L Antibody light chain; b 99.7 2.4E-18 8.3E-23 170.3 9.4 171 575-753 31-229 (237)
318 3auv_A SC-DSFV derived from th 99.7 1.1E-17 3.8E-22 169.4 14.5 184 575-761 19-255 (276)
319 2zg1_A Sialic acid-binding IG- 99.7 5.8E-17 2E-21 157.4 19.0 170 194-375 5-201 (214)
320 3r06_A Anti-mouse CD3epsilon a 99.7 3.9E-18 1.3E-22 165.6 10.5 168 575-750 8-203 (213)
321 2p1y_A Bispecific alpha/beta T 99.7 3.8E-17 1.3E-21 161.7 17.9 175 192-374 3-222 (238)
322 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 4.2E-18 1.4E-22 166.5 10.6 174 577-757 9-220 (222)
323 2p1y_A Bispecific alpha/beta T 99.7 9.3E-18 3.2E-22 166.1 13.2 170 576-747 8-222 (238)
324 2if7_A SLAM family member 6; N 99.7 9.5E-18 3.2E-22 159.6 12.6 166 195-377 4-182 (193)
325 2j6e_L IGM, FAB light chain; a 99.7 4.4E-18 1.5E-22 168.0 10.6 177 575-755 26-230 (234)
326 4i0k_A CD276 antigen; immunogl 99.7 5.3E-18 1.8E-22 165.9 10.8 180 208-393 9-209 (222)
327 3esu_F Antibody 14B7* light ch 99.7 1.4E-17 4.8E-22 166.2 14.0 167 576-745 12-231 (250)
328 4fmk_A Poliovirus receptor-rel 99.7 6.8E-18 2.3E-22 165.4 11.5 190 466-664 5-220 (225)
329 3cfw_A L-selectin; EGF, cell a 99.7 6.8E-18 2.3E-22 155.0 9.9 117 39-160 1-120 (164)
330 3s96_B 3B5H10 FAB light chain; 99.7 9.7E-18 3.3E-22 163.5 11.3 180 190-376 2-209 (218)
331 3qib_D 2B4 beta chain; IG doma 99.7 2.8E-18 9.5E-23 173.4 7.4 196 538-749 4-244 (270)
332 1gsm_A Madcam-1, mucosal addre 99.7 3.7E-17 1.3E-21 153.9 14.4 120 682-805 17-143 (210)
333 1qok_A MFE-23 recombinant anti 99.7 1.9E-17 6.5E-22 168.2 13.5 183 576-760 34-268 (282)
334 1nqb_A Single-chain antibody f 99.7 6.9E-17 2.4E-21 161.3 17.0 188 195-391 6-234 (256)
335 2znx_A SCFV; fluorotryptohpan, 99.7 5.3E-17 1.8E-21 160.9 15.9 176 191-373 3-222 (242)
336 1g1s_A P-selectin; selectin, l 99.7 1.3E-17 4.4E-22 152.8 10.4 116 39-160 1-120 (162)
337 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 2E-17 6.7E-22 165.6 12.6 179 575-760 10-248 (256)
338 1g1t_A E-selectin; EGF, adhesi 99.7 1.4E-17 4.9E-22 151.8 10.5 117 39-160 1-120 (157)
339 3umt_A SCFV heavy chain and li 99.7 2.8E-17 9.5E-22 164.6 13.6 186 577-763 11-248 (256)
340 1pz5_B Heavy chain of FAB (SYA 99.7 9.5E-18 3.3E-22 163.7 9.9 170 577-756 9-217 (220)
341 3ux9_B SCFV antibody; five hel 99.7 4.2E-17 1.4E-21 163.3 14.8 170 577-747 11-236 (256)
342 1f3r_B FV antibody fragment; I 99.7 1E-16 3.4E-21 160.5 17.5 186 196-391 7-246 (257)
343 3uzq_A Anti-dengue MAB 4E11; d 99.7 2.2E-17 7.6E-22 164.9 12.6 188 575-765 8-249 (253)
344 3sob_L Antibody light chain; b 99.7 1.9E-17 6.7E-22 163.7 12.0 181 189-375 24-224 (237)
345 2rgs_A I, IG gamma-2B heavy ch 99.7 3.2E-18 1.1E-22 166.5 6.0 181 188-375 8-204 (218)
346 1moe_A Anti-CEA MAB T84.66; an 99.7 1.1E-16 3.8E-21 158.5 17.2 176 191-373 3-220 (240)
347 3bkj_L WO2 IGG2A FAB fragment 99.7 1.6E-17 5.3E-22 166.0 11.0 180 190-375 35-239 (252)
348 1q0x_L FAB 9B1, light chain; a 99.7 3E-17 1E-21 159.2 12.7 177 192-375 4-203 (212)
349 2znx_A SCFV; fluorotryptohpan, 99.7 4.3E-17 1.5E-21 161.5 14.0 169 575-746 8-222 (242)
350 3bkj_L WO2 IGG2A FAB fragment 99.7 1.1E-17 3.6E-22 167.2 9.5 167 576-750 42-241 (252)
351 3mtr_A N-CAM-1, NCAM-1, neural 99.7 1.8E-17 6.3E-22 161.0 10.9 181 567-762 18-211 (215)
352 1hnf_A CD2; T lymphocyte adhes 99.7 6.9E-17 2.4E-21 150.8 14.3 153 208-377 13-171 (182)
353 1dr9_A B7-1 (CD80), T lymphocy 99.7 9.4E-18 3.2E-22 161.2 8.7 165 209-376 9-190 (201)
354 1moe_A Anti-CEA MAB T84.66; an 99.7 5.9E-17 2E-21 160.6 14.6 166 575-745 8-219 (240)
355 2vol_A Murine IGG FC; FC, zinc 99.7 5.6E-18 1.9E-22 163.3 6.7 178 191-375 4-196 (207)
356 1mju_H Immunoglobulin MS6-12; 99.7 1.3E-17 4.4E-22 163.3 9.3 180 577-765 9-222 (227)
357 2v5y_A Receptor-type tyrosine- 99.7 9.9E-16 3.4E-20 177.9 26.7 434 210-761 92-562 (731)
358 3d9a_H Heavy chain of hyhel10 99.7 1.8E-17 6.2E-22 160.4 10.1 168 576-754 8-208 (210)
359 1nfd_E H57 FAB; complex (immun 99.7 1.4E-17 4.7E-22 161.6 9.1 175 196-376 6-201 (212)
360 2xzc_L FAB A.17 light chain; i 99.7 3.1E-17 1.1E-21 159.6 11.6 174 196-375 7-203 (216)
361 3uzq_A Anti-dengue MAB 4E11; d 99.7 2.3E-16 8E-21 157.5 18.2 193 192-393 4-247 (253)
362 1dee_B IGM RF 2A2; FAB-IBP com 99.7 1.1E-16 3.6E-21 156.4 15.2 168 577-754 9-221 (223)
363 3pv7_A B7-H6, IG-like domain-c 99.7 2.2E-17 7.4E-22 164.6 10.5 184 196-388 10-224 (248)
364 3juy_B 3B3 single chain varian 99.7 2.1E-16 7E-21 158.2 17.6 179 189-374 6-243 (256)
365 3knb_B Obscurin-like protein 1 99.7 1.3E-17 4.4E-22 140.4 7.4 82 681-762 22-107 (107)
366 3tv3_L PGT128 light chain, IG 99.7 3.5E-17 1.2E-21 158.6 11.3 176 192-376 4-200 (211)
367 2ghw_B Anti-SARS SCFV antibody 99.7 2.6E-16 9E-21 156.6 17.4 166 480-647 15-228 (247)
368 1gsm_A Madcam-1, mucosal addre 99.7 2.9E-16 1E-20 147.7 16.6 155 578-752 17-197 (210)
369 3bqu_C 3H6 FAB light chain; be 99.7 1.9E-18 6.4E-23 170.5 1.4 166 575-748 30-223 (233)
370 1c1e_H Catalytic antibody 1E9 99.7 8.7E-17 3E-21 156.8 13.2 174 196-376 7-209 (219)
371 1svz_A Immunoglobulin;, single 99.7 7.7E-17 2.6E-21 160.4 12.8 162 576-746 9-228 (247)
372 3umt_A SCFV heavy chain and li 99.7 3E-16 1E-20 157.0 17.1 187 197-393 10-248 (256)
373 3juy_B 3B3 single chain varian 99.7 8.6E-17 2.9E-21 161.0 13.0 179 569-748 7-244 (256)
374 3eow_R Poliovirus receptor; im 99.7 5.2E-17 1.8E-21 158.6 11.1 174 209-392 14-212 (221)
375 2dru_A Chimera of CD48 antigen 99.7 4.2E-16 1.4E-20 145.9 16.7 156 198-377 8-171 (180)
376 1svz_A Immunoglobulin;, single 99.7 4.4E-16 1.5E-20 154.9 17.9 177 191-373 3-228 (247)
377 2fbj_H IGA-kappa J539 FAB (hea 99.7 9.9E-17 3.4E-21 156.2 12.9 168 577-751 9-212 (220)
378 4dzb_B Vbeta2 (MAIT T cell rec 99.7 2.5E-17 8.5E-22 163.9 8.5 168 576-751 9-222 (246)
379 3omz_A Human vdelta1 gamma del 99.7 3E-16 1E-20 157.3 16.5 196 190-391 3-251 (259)
380 3bqu_C 3H6 FAB light chain; be 99.7 1.6E-17 5.6E-22 163.7 6.8 180 190-375 24-223 (233)
381 2gjj_A A21 single-chain antibo 99.7 5.7E-16 1.9E-20 155.4 18.0 194 190-390 6-258 (264)
382 1op3_H FAB 2G12, heavy chain; 99.7 6.5E-17 2.2E-21 158.2 10.4 167 577-751 9-216 (225)
383 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 5E-16 1.7E-20 155.3 17.0 192 190-390 4-248 (256)
384 1ccz_A Protein (CD58); LFA-3, 99.7 2.3E-16 7.8E-21 146.2 13.4 148 209-377 10-161 (171)
385 3mtr_A N-CAM-1, NCAM-1, neural 99.7 4.2E-16 1.4E-20 151.4 15.5 172 188-379 18-201 (215)
386 1mju_H Immunoglobulin MS6-12; 99.7 1.7E-16 5.9E-21 155.3 12.6 175 195-376 6-206 (227)
387 3gkz_A Anti-methamphetamine si 99.7 2.6E-16 8.8E-21 157.6 14.1 185 576-761 16-250 (257)
388 3omz_A Human vdelta1 gamma del 99.7 9E-17 3.1E-21 161.1 10.8 174 572-746 6-231 (259)
389 1l6x_A Immunoglobulin gamma-1 99.7 3.3E-17 1.1E-21 157.9 7.1 160 209-375 18-196 (207)
390 2rgs_A I, IG gamma-2B heavy ch 99.7 8E-18 2.8E-22 163.6 2.8 158 580-749 23-205 (218)
391 1hxm_B Gamma-delta T-cell rece 99.7 3.6E-16 1.2E-20 154.8 14.5 180 575-758 8-227 (242)
392 3bae_H WO2 IGG2A FAB fragment 99.7 1.2E-16 4.2E-21 156.6 10.7 170 576-755 8-221 (228)
393 2j6e_L IGM, FAB light chain; a 99.7 1.5E-16 5.1E-21 156.9 11.3 179 191-376 22-224 (234)
394 1qok_A MFE-23 recombinant anti 99.7 9.2E-16 3.1E-20 155.7 17.0 190 192-391 29-269 (282)
395 2v5y_A Receptor-type tyrosine- 99.7 2.2E-14 7.4E-19 166.6 30.7 346 311-763 92-460 (731)
396 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 2.1E-16 7.2E-21 154.4 11.5 174 196-376 7-212 (222)
397 1i1c_A IGG2A, IG gamma-2A chai 99.7 6.5E-17 2.2E-21 159.1 7.6 178 191-375 18-210 (239)
398 1dn0_B IGM-kappa cold agglutin 99.7 5.5E-16 1.9E-20 152.2 14.1 177 577-759 9-226 (232)
399 3gkz_A Anti-methamphetamine si 99.7 1.6E-15 5.6E-20 151.7 17.8 192 191-391 10-250 (257)
400 3ux9_B SCFV antibody; five hel 99.7 1.7E-15 5.7E-20 151.6 17.5 172 195-373 8-235 (256)
401 2gjj_A A21 single-chain antibo 99.7 4.3E-16 1.5E-20 156.2 13.1 168 576-746 13-239 (264)
402 3d9a_H Heavy chain of hyhel10 99.7 4.1E-16 1.4E-20 150.8 12.5 172 196-376 7-203 (210)
403 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 2.6E-16 8.9E-21 158.6 11.5 169 575-746 22-254 (268)
404 3o3u_N Maltose-binding peripla 99.6 3.2E-16 1.1E-20 177.3 12.6 163 578-749 376-566 (581)
405 1op3_H FAB 2G12, heavy chain; 99.6 6.9E-16 2.4E-20 150.8 13.3 172 196-375 7-213 (225)
406 3knb_A Titin; IG-like, titin, 99.6 2.7E-16 9.4E-21 130.5 8.5 81 680-760 13-99 (100)
407 2fbj_H IGA-kappa J539 FAB (hea 99.6 1.3E-15 4.5E-20 148.2 14.8 173 196-376 7-210 (220)
408 2gki_A Nuclease; anti-DNA anti 99.6 4.3E-16 1.5E-20 158.7 11.7 184 577-764 31-276 (291)
409 1pz5_B Heavy chain of FAB (SYA 99.6 8.1E-16 2.8E-20 150.0 13.1 174 196-376 7-210 (220)
410 3pl6_D MBP peptide / T-cell re 99.6 2.3E-16 7.9E-21 159.1 9.4 165 575-749 33-241 (268)
411 2w59_A IGY FCU3-4; immunoglobu 99.6 1.2E-16 4.1E-21 156.7 7.0 173 192-375 16-216 (231)
412 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 1.8E-15 6E-20 152.4 15.6 178 189-373 15-254 (268)
413 2xqy_G A13-D6.3 monoclonal ant 99.6 3.8E-16 1.3E-20 155.9 10.5 165 577-751 15-216 (261)
414 3m8o_H Immunoglobulin A1 heavy 99.6 2.1E-15 7.3E-20 147.0 15.3 164 577-750 9-213 (221)
415 3knb_B Obscurin-like protein 1 99.6 6.3E-16 2.2E-20 130.0 9.9 92 188-296 12-107 (107)
416 2vol_A Murine IGG FC; FC, zinc 99.6 8.9E-17 3E-21 154.9 5.4 167 480-648 16-196 (207)
417 1wwb_X Protein (brain derived 99.6 6.9E-16 2.4E-20 129.2 9.9 81 684-764 13-102 (103)
418 3nfj_J T cell receptor beta ch 99.6 2.7E-16 9.1E-21 156.3 8.6 168 576-751 9-221 (245)
419 3fku_X Neutralizing antibody F 99.6 2.7E-15 9.4E-20 151.8 16.1 193 192-391 4-251 (280)
420 2w59_A IGY FCU3-4; immunoglobu 99.6 1.8E-16 6.1E-21 155.5 7.0 159 578-749 23-217 (231)
421 4acp_A IG gamma-1 chain C regi 99.6 1.8E-16 6.1E-21 155.2 6.8 180 189-375 23-217 (240)
422 3qib_D 2B4 beta chain; IG doma 99.6 3.3E-16 1.1E-20 158.1 8.7 158 631-806 3-196 (270)
423 4dzb_B Vbeta2 (MAIT T cell rec 99.6 1.1E-15 3.9E-20 151.8 12.3 178 191-376 3-220 (246)
424 3nl4_H Antigen binding fragmen 99.6 4E-16 1.4E-20 151.5 8.7 176 576-758 7-212 (215)
425 3liz_H 4C3 monoclonal antibody 99.6 3.5E-16 1.2E-20 155.9 8.4 175 577-759 9-219 (253)
426 4ei6_B Vbeta16 XV19 type II na 99.6 6.1E-16 2.1E-20 153.7 10.1 166 575-749 9-219 (245)
427 4acp_A IG gamma-1 chain C regi 99.6 6.2E-17 2.1E-21 158.5 2.5 193 543-747 1-216 (240)
428 1c5d_H Monoclonal antibody aga 99.6 1.7E-15 5.7E-20 147.0 12.5 170 576-754 8-210 (215)
429 3q5y_A TCR N15 beta; IG, T cel 99.6 6.8E-16 2.3E-20 152.8 9.7 166 575-749 9-213 (240)
430 2cqv_A MLCK, myosin light chai 99.6 1.7E-15 5.7E-20 130.0 10.8 88 681-768 16-107 (114)
431 3nl4_H Antigen binding fragmen 99.6 2.9E-15 9.9E-20 145.4 13.6 173 196-376 6-203 (215)
432 1l6x_A Immunoglobulin gamma-1 99.6 2.3E-16 7.8E-21 152.1 5.5 158 581-748 16-196 (207)
433 3o3u_N Maltose-binding peripla 99.6 1.8E-15 6.3E-20 171.1 13.9 165 208-376 380-566 (581)
434 2wbj_D OB TCR; transmembrane, 99.6 1.2E-15 4.2E-20 154.6 11.1 168 575-750 31-246 (279)
435 3fku_X Neutralizing antibody F 99.6 1.7E-15 5.8E-20 153.4 12.0 186 575-761 7-251 (280)
436 3shs_A HOC head outer capsid p 99.6 8.6E-15 2.9E-19 137.5 15.4 202 575-800 9-235 (304)
437 2gki_A Nuclease; anti-DNA anti 99.6 8.1E-15 2.8E-19 149.3 16.6 189 195-392 28-274 (291)
438 3bae_H WO2 IGG2A FAB fragment 99.6 1.9E-15 6.4E-20 148.1 11.1 174 196-376 7-215 (228)
439 1he7_A High affinity nerve gro 99.6 2.7E-15 9.3E-20 127.6 10.3 81 684-764 12-103 (126)
440 1hxm_B Gamma-delta T-cell rece 99.6 1.7E-14 5.8E-19 142.7 17.2 178 191-377 3-219 (242)
441 3bn9_D E2 FAB heavy chain; ant 99.6 1.3E-15 4.6E-20 151.1 9.2 167 577-750 9-220 (257)
442 3q5y_A TCR N15 beta; IG, T cel 99.6 8.7E-15 3E-19 144.8 13.9 180 190-376 3-213 (240)
443 3to4_D NKT vbeta2 (mouse varia 99.6 2E-15 7E-20 150.5 9.4 164 576-747 9-217 (253)
444 1dee_B IGM RF 2A2; FAB-IBP com 99.6 9.8E-15 3.3E-19 142.4 14.0 173 196-376 7-216 (223)
445 2xqy_G A13-D6.3 monoclonal ant 99.6 1.1E-14 3.7E-19 145.2 14.3 175 194-375 11-213 (261)
446 4ei6_B Vbeta16 XV19 type II na 99.6 6.5E-15 2.2E-19 146.2 12.6 178 190-376 3-219 (245)
447 1bec_A 14.3.D T cell antigen r 99.6 3.3E-15 1.1E-19 147.4 10.1 164 576-748 7-211 (238)
448 1oga_E TRBC1, T-cell receptor 99.6 1.5E-15 5.3E-20 151.2 7.5 168 575-751 10-220 (252)
449 3shs_A HOC head outer capsid p 99.6 4.1E-14 1.4E-18 132.9 16.4 192 192-424 5-209 (304)
450 3knb_A Titin; IG-like, titin, 99.6 4.7E-15 1.6E-19 123.0 9.1 90 189-293 5-98 (100)
451 1ypz_F T-cell receptor gamma c 99.6 4.6E-15 1.6E-19 145.4 10.5 175 576-762 9-227 (230)
452 3m8o_H Immunoglobulin A1 heavy 99.6 1.9E-14 6.7E-19 140.2 14.5 173 196-375 7-211 (221)
453 3bn9_D E2 FAB heavy chain; ant 99.6 6.5E-15 2.2E-19 146.2 10.6 172 196-375 7-218 (257)
454 3pl6_D MBP peptide / T-cell re 99.6 1.4E-14 4.7E-19 146.0 13.2 178 190-376 27-241 (268)
455 3nfj_J T cell receptor beta ch 99.6 7E-15 2.4E-19 146.0 10.9 177 192-376 4-219 (245)
456 1wit_A Twitchin 18TH IGSF modu 99.6 5.1E-15 1.7E-19 121.6 8.0 79 681-759 11-93 (93)
457 1c5d_H Monoclonal antibody aga 99.6 2.9E-14 9.9E-19 138.1 14.6 172 196-376 7-205 (215)
458 3kvq_A Vascular endothelial gr 99.6 7.3E-15 2.5E-19 124.7 8.8 100 657-764 3-104 (108)
459 2e7c_A Myosin-binding protein 99.6 1.2E-14 4.2E-19 125.4 10.0 82 681-762 33-117 (118)
460 2dav_A SLOW MYBP-C, myosin-bin 99.6 1.6E-14 5.6E-19 122.9 10.5 84 677-760 12-111 (126)
461 2wbj_D OB TCR; transmembrane, 99.5 1.2E-14 4E-19 147.3 11.1 180 189-376 24-245 (279)
462 1g1c_A Immunoglobulin-like dom 99.5 6.3E-15 2.2E-19 122.8 7.5 80 682-761 15-99 (99)
463 2eo9_A Roundabout homolog 1; b 99.5 1.3E-14 4.6E-19 125.2 9.4 98 680-777 16-117 (118)
464 2kkq_A Myotilin; unknown funct 99.5 1.6E-14 5.4E-19 123.9 9.5 89 677-765 20-114 (116)
465 2lu7_A Obscurin-like protein 1 99.5 1E-14 3.5E-19 115.9 7.5 75 682-761 6-84 (84)
466 1i1c_A IGG2A, IG gamma-2A chai 99.5 7.6E-15 2.6E-19 144.2 8.2 122 684-805 29-169 (239)
467 1dn0_B IGM-kappa cold agglutin 99.5 3.5E-14 1.2E-18 139.3 12.7 173 196-376 7-216 (232)
468 2yuz_A Myosin-binding protein 99.5 1.3E-14 4.3E-19 120.4 7.9 82 678-763 13-98 (100)
469 2ckn_A Basic fibroblast growth 99.5 2E-14 6.8E-19 118.5 9.0 78 680-758 17-94 (95)
470 2aty_A Complement receptor chi 99.5 2.7E-14 9.1E-19 151.0 11.9 165 209-375 183-361 (376)
471 3qp3_A Titin; I-SET IG-like, s 99.5 1.4E-14 4.7E-19 121.7 7.6 81 682-762 18-102 (103)
472 3liz_H 4C3 monoclonal antibody 99.5 3.1E-14 1.1E-18 141.8 11.5 174 196-376 7-209 (253)
473 2kdg_A Myotilin; immonoglobuli 99.5 1.9E-14 6.7E-19 120.1 8.3 82 681-762 14-100 (100)
474 3tv3_H PGT128 heavy chain, IG 99.5 4.3E-14 1.5E-18 139.3 11.9 176 576-758 8-235 (239)
475 1wwc_A Protein (NT-3 growth fa 99.5 2.9E-14 9.8E-19 123.1 9.3 96 658-764 2-105 (118)
476 2cqv_A MLCK, myosin light chai 99.5 9.9E-14 3.4E-18 118.8 12.5 94 188-298 6-103 (114)
477 2dm2_A Palladin; beta-sandwich 99.5 2.9E-14 9.8E-19 121.4 9.0 86 680-765 16-107 (110)
478 1fhg_A Telokin; immunoglobulin 99.5 1.5E-14 5E-19 131.5 7.5 88 682-769 51-143 (154)
479 2edj_A Roundabout homolog 2; K 99.5 1.5E-14 5E-19 120.7 6.6 81 682-762 18-100 (100)
480 1ow0_A IG alpha-1 chain C regi 99.5 1.1E-15 3.7E-20 148.0 -0.5 159 575-748 11-199 (214)
481 2cr3_A Basic fibroblast growth 99.5 3.7E-14 1.3E-18 117.8 8.9 81 682-763 13-93 (99)
482 3qhz_H Human monoclonal antibo 99.5 2.3E-14 7.9E-19 140.8 8.6 176 577-759 9-228 (232)
483 3irg_B Obscurin-like protein 1 99.5 2.2E-14 7.4E-19 121.5 6.9 81 682-762 23-107 (107)
484 1gxe_A Myosin binding protein 99.5 5.3E-14 1.8E-18 123.8 9.2 79 681-759 27-138 (139)
485 2bk8_A Connectin, M1, titin he 99.5 9.9E-14 3.4E-18 114.9 10.4 80 681-760 10-94 (97)
486 1ow0_A IG alpha-1 chain C regi 99.5 4.4E-15 1.5E-19 143.7 2.5 176 191-375 6-199 (214)
487 2yr3_A Myosin light chain kina 99.5 6.6E-14 2.3E-18 116.5 9.3 78 682-759 21-99 (99)
488 1bec_A 14.3.D T cell antigen r 99.5 1.6E-13 5.3E-18 135.4 13.5 177 192-375 2-211 (238)
489 1ypz_F T-cell receptor gamma c 99.5 1.5E-13 5.2E-18 134.5 13.3 175 193-376 5-216 (230)
490 1ypz_E T cell receptor delta, 99.5 3.4E-13 1.2E-17 129.4 15.2 174 192-376 4-198 (207)
491 2eo9_A Roundabout homolog 1; b 99.5 2.4E-13 8.3E-18 117.2 12.7 98 188-301 7-105 (118)
492 2edn_A Myosin-binding protein 99.5 3.1E-14 1E-18 119.8 6.5 84 678-761 18-117 (118)
493 2edj_A Roundabout homolog 2; K 99.5 1.8E-13 6.3E-18 114.0 11.1 93 187-295 6-99 (100)
494 1u2h_A APEG-1, aortic preferen 99.5 4.5E-14 1.5E-18 117.5 7.2 79 682-760 15-98 (99)
495 3n9g_H FAB fragment of MAB CR4 99.5 1.2E-13 4.1E-18 135.3 11.4 176 577-760 9-225 (230)
496 3qp3_A Titin; I-SET IG-like, s 99.5 1.9E-13 6.4E-18 114.7 10.8 94 184-294 3-100 (103)
497 2kkq_A Myotilin; unknown funct 99.5 2.3E-13 8E-18 116.6 11.5 97 186-298 12-113 (116)
498 1waa_A Titin; metal binding pr 99.5 8.1E-14 2.8E-18 113.6 8.0 78 679-761 12-93 (93)
499 2ckn_A Basic fibroblast growth 99.5 2.4E-13 8.2E-18 111.9 11.0 87 188-292 8-94 (95)
500 2lvc_A Obscurin-like protein 1 99.5 9.1E-14 3.1E-18 112.4 8.2 72 682-758 16-91 (91)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=1.5e-66 Score=588.12 Aligned_cols=508 Identities=23% Similarity=0.336 Sum_probs=387.2
Q ss_pred CCCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeC--CeEEEcCCc
Q psy14896 187 PRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSG--GNLIINDPR 264 (813)
Q Consensus 187 ~~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~--~~l~i~~~~ 264 (813)
..||.|+..+.++.+.+| ++++|.|.+.|.|.|.|+|||||..+.. ....++...+ ++|.|.+.
T Consensus 3 ~~pP~f~~~~~~~~v~~G-----~~v~L~C~~~g~p~~~v~W~k~g~~l~~--------~~~~~~~~~~~~~~L~I~~v- 68 (570)
T 3b43_A 3 MEPPYFIEPLEHVEAAIG-----EPITLQCKVDGTPEIRIAWYKEHTKLRS--------APAYKMQFKNNVASLVINKV- 68 (570)
T ss_dssp CCCCEEEECCCCEEECTT-----SCEEEEEEEESSSSCEEEEECSSSBCCC--------CSSEEEECCTTEEEEEESSC-
T ss_pred CCCCcceEECCceEEcCC-----CEEEEEEEEccCCCCEEEEEECCEEccC--------CCCEEEEEECCEEEEEEccC-
Confidence 357999999999988777 6799999999999999999999987632 1111222222 46777775
Q ss_pred cccCCeeEEEEeecCceeeEeeeeEEeeee---ecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccC
Q psy14896 265 QVEDRGSYHCKASNKFGSIISESVQLAFGF---IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE 341 (813)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~---~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~ 341 (813)
+.+|+|.|+|.|.|..|... ....|.|.. +|.+..........+|+.++|.|.+ .|.|+++++|+|||+++....
T Consensus 69 ~~~D~G~Y~C~a~N~~g~~~-~~~~l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~k~g~~l~~~~ 146 (570)
T 3b43_A 69 DHSDVGEYTCKAENSVGAVA-SSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECRI-NGSEPLQVSWYKDGELLKDDA 146 (570)
T ss_dssp CGGGCEEEEEEEEETTEEEE-EEEEEEECCCCCCCEESSCCCCEEEETTSCEEEEEEE-ESSSSCEEEEEETTEECCCCS
T ss_pred ChhhCEEEEEEEEeCCceEE-EEEEEEECCCCCCCcccccCCCeEecCCCeEEEEEEE-ccCCCCEEEEEECCEECcCCC
Confidence 89999999999999999873 345555532 3445555666777889999999996 678899999999998753322
Q ss_pred CccEE-EccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEE
Q psy14896 342 DKRVF-VSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLE 420 (813)
Q Consensus 342 ~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~ 420 (813)
..... ....++|.|.++..+|+|.|+|.|.|..|.... .+.|.|........+. .......+.+|+.+.|.
T Consensus 147 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~---~~~l~v~~~~~pp~~~-----~~p~~~~v~~G~~~~l~ 218 (570)
T 3b43_A 147 NLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASS---SAKLTLSEHEVPPFFD-----LKPVSVDLALGESGTFK 218 (570)
T ss_dssp SEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEE---EEEEEEECCCCCCEEE-----ECCCCBCCBSBSCEEEE
T ss_pred CEEEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEE---EEEEEEcCCCCCCccc-----cCCceeEecCCCeEEEE
Confidence 22221 223458999999999999999999998875432 2556654321111110 11123457778888888
Q ss_pred EEEeecCCCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEE
Q psy14896 421 CVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYE 500 (813)
Q Consensus 421 C~~~g~p~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~ 500 (813)
|.+.|.|.|.|+|+|++.++.....
T Consensus 219 C~~~g~p~p~i~W~k~g~~i~~~~~------------------------------------------------------- 243 (570)
T 3b43_A 219 CHVTGTAPIKITWAKDNREIRPGGN------------------------------------------------------- 243 (570)
T ss_dssp EEEESSSCCEEEEEETTEECCTTSS-------------------------------------------------------
T ss_pred EEEEECCCCEEEEEECCEECcCCCc-------------------------------------------------------
Confidence 8888887778888887766643211
Q ss_pred EeeccccccceeccccCCCCCceEEe--eCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecccccccCCC-
Q psy14896 501 WFKEDYVQDRLVANLIDPLSDKRFTL--SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAP- 577 (813)
Q Consensus 501 W~k~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~- 577 (813)
.++.. ..++|.|.++ ..+|+|.|+|.|.|..|.. +..+.|.|..+|.+.....+
T Consensus 244 ---------------------~~~~~~~~~~~L~i~~v-~~~D~G~Y~C~a~N~~g~~-~~~~~l~V~~~p~~~~~~~~~ 300 (570)
T 3b43_A 244 ---------------------YKMTLVENTATLTVLKV-TKGDAGQYTCYASNVAGKD-SCSAQLGVQEPPRFIKKLEPS 300 (570)
T ss_dssp ---------------------EEEEEETTEEEEEESSB-CGGGCEEEEEEEEETTEEE-EEEEEECCBCCCEEEECCCSB
T ss_pred ---------------------EEEEEECCEEEEEEccc-CcccCEEEEEEEECCCCcE-EEEEEEEeecCCcccccCCCc
Confidence 11111 1247899996 9999999999999999987 45588889888876654433
Q ss_pred ceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEe---eCccEEEEeecccCCeeEEEEEEeeecCccccC
Q psy14896 578 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS---YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNG 654 (813)
Q Consensus 578 ~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 654 (813)
..+.+|+.+.|.|.+ .|.|.+.|+|+|++.++. ...++.+. ..+.|.|.+++.+|+|.|+|.|.|..|....
T Consensus 301 ~~v~~g~~~~l~C~~-~g~P~p~v~W~k~~~~l~--~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~-- 375 (570)
T 3b43_A 301 RIVKQDEHTRYECKI-GGSPEIKVLWYKDETEIQ--ESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASS-- 375 (570)
T ss_dssp CCEESSCEEEEEEEE-ESSSSCEEEEEETTEECC--CSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEE--
T ss_pred cEEcCCCcEEEEEEE-eeCCCCEEEEeECCEECC--CCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEE--
Confidence 457789999999999 799999999999998643 33333332 2346999999999999999999999987544
Q ss_pred ceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceee----ecceEEEECC
Q psy14896 655 PFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE----NFNRILTIPN 730 (813)
Q Consensus 655 ~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~----~~~~~L~i~~ 730 (813)
.+.|.|..+|.+.. .+....+.+|++++|.|.+.|.|+|.|+|+|+|.+|..+.++. ....+|.|.+
T Consensus 376 -~~~l~V~~~P~~~~--------~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~ 446 (570)
T 3b43_A 376 -STSLKVKEPPVFRK--------KPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILN 446 (570)
T ss_dssp -EEEECEECCCEECS--------CCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECS
T ss_pred -EEEEEecCCCeeec--------CCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECC
Confidence 36788888876543 1223567899999999999999999999999999998766442 2235899999
Q ss_pred CCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCcccccCCceeecCCCeEEEEEEEcccCCceEEEEECCEec-ccccccc
Q psy14896 731 VKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELG-HQMTDLL 809 (813)
Q Consensus 731 v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~g~~l-~~~~~~~ 809 (813)
++.+|+|.|+|.|.|.+|..+..+.|.|..||.|...+.+..+.+|+++.|.|.+.|.|+|+|.|+|||.++ ..+.++.
T Consensus 447 v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~ 526 (570)
T 3b43_A 447 VDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIW 526 (570)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEE
T ss_pred CChhhCEEEEEEEEECCCeEEEEEEEEeccCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999998655 4444444
Q ss_pred c
Q psy14896 810 L 810 (813)
Q Consensus 810 i 810 (813)
|
T Consensus 527 ~ 527 (570)
T 3b43_A 527 I 527 (570)
T ss_dssp E
T ss_pred E
Confidence 3
No 2
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=2.2e-63 Score=572.81 Aligned_cols=565 Identities=19% Similarity=0.288 Sum_probs=422.0
Q ss_pred eeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccc--cccccc-------cCCCccEE-eeCCeEEEc
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRL--VANLID-------PLSDKRFT-LSGGNLIIN 261 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~--~~~~~~-------~~~~~~~~-~~~~~l~i~ 261 (813)
|+.+|..+.+.+| ++++|.|...+.|.+.|.|||+....... .....+ +....|.. ..+++|.|.
T Consensus 2 v~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~gr~~~~~~~sL~I~ 76 (642)
T 1e07_A 2 LTIESTPFNVAEG-----KEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQ 76 (642)
T ss_pred ceEeccCCccccc-----ccEEEEEccCCCCceEEEEECCcccCCcceEEEEEccccccccCccccCceeeccCCcEEEC
Confidence 4555666777666 77999999876677899999954321100 000000 11122333 347789998
Q ss_pred CCccccCCeeEEEEeecCceeeEeeeeEEeeeeecc-cccC-CCCceeecCCCeEEEecCCCCCCcceEEEeeccccccc
Q psy14896 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE-FNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV 339 (813)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~-~~~~-~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~ 339 (813)
+. +.+|+|.|+|.+.|......+..+.|.|...+. +.+. .....+..|+.++|.|.+. + |.+.+.|+|||.++
T Consensus 77 ~v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~-~-p~~~v~W~~~g~~l-- 151 (642)
T 1e07_A 77 NI-IQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDKDAVAFTCEPE-T-QDATYLWWVNNQSL-- 151 (642)
T ss_pred CC-CcccCcEEEEEEEcCCCeEEEEEEEEEecccCCCCcEEccCceeEecCCcEEEEEECC-C-CCeeEEEEECCeEC--
Confidence 86 899999999999986432225566777765322 2222 2234567788899999964 4 89999999999874
Q ss_pred cCCccEEEcc-CccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEE
Q psy14896 340 EEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVR 418 (813)
Q Consensus 340 ~~~~~~~~~~-~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~ 418 (813)
....++.+.. ++.|.|.+++.+|+|.|+|.|.|..|. ..+..+.|.|...|....+.+ ....+.+|+.+.
T Consensus 152 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~--~~s~~~~l~V~~~p~~~~~~~-------~~~~~~~G~~~~ 222 (642)
T 1e07_A 152 PVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSA--RRSDSVILNVLYGPDAPTISP-------LNTSYRSGENLN 222 (642)
T ss_pred CCCCceEEcCCCCEEEEeCCCcccCeeEEEEEecCCCC--cccceEEEEEEeCCCCcEEec-------CCcccccCCEEE
Confidence 3445665554 458999999999999999999998875 234557888886554332221 234689999999
Q ss_pred EEEEEeecCCCeeeEeecCCcCCCCceeccccceEEEcccc--cccceEEeCCCce---------Eecc-----------
Q psy14896 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVK--MRGPYFIKQPTDV---------VFDL----------- 476 (813)
Q Consensus 419 l~C~~~g~p~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~--~~g~y~~~~~~~~---------~~~~----------- 476 (813)
|.|.+.|+|.|.+.|+++|..+.. ...|.|.++. ++|.|+|.+.+.. .+..
T Consensus 223 l~C~~~g~p~~~i~W~~~g~~i~~-------~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~ 295 (642)
T 1e07_A 223 LSCHAASNPPAQYSWFVNGTFQQS-------TQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITS 295 (642)
T ss_pred EEEEcCCCCCcEEEEEECCeEccc-------CCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCCCEEEc
Confidence 999999999999999999988853 3457777664 5899999875421 1100
Q ss_pred ---cccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEE--eeCCeEEEeCCCCCCCCceEEEEEEc
Q psy14896 477 ---SKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFT--LSGGNLIINDPRQVEDRGSYHCKASN 551 (813)
Q Consensus 477 ---~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~~d~G~Y~C~a~n 551 (813)
.....|+.+.|.|.+.|.| +.+.|+|+|+.+. ...++. ..+++|.|.++ ..+|+|.|+|.|.|
T Consensus 296 ~~~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~----------~~~~~~~~~~~~~L~i~~~-~~~d~G~Y~C~a~n 363 (642)
T 1e07_A 296 NNSNPVEDEDAVALTCEPEIQN-TTYLWWVNNQSLP----------VSPRLQLSNDNRTLTLLSV-TRNDVGPYECGIQN 363 (642)
T ss_pred CCceeEecCCcEEEEEECCCCC-ccEEEEECCccCC----------CcCCEEEeCCCCEEEEecc-CcccCeeEEEEEeC
Confidence 0112367799999999987 7999999996542 122333 24578999997 89999999999999
Q ss_pred CceeEEeecEEEEEeecccc-cccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEe
Q psy14896 552 KFGSIISESVQLAFGFIGEF-NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSA 630 (813)
Q Consensus 552 ~~g~~~s~~~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~ 630 (813)
..|...+..+.|.|..+|.. ...+....+..|+.++|.|.+ .|.|.+.|+|+|+|.++. .+..|.|.+
T Consensus 364 ~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~i~W~~~g~~~~----------~~~~L~i~~ 432 (642)
T 1e07_A 364 ELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHA-ASNPPAQYSWLIDGNIQQ----------HTQELFISN 432 (642)
T ss_pred CCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEc-CccCCCeEEEEECCEEcC----------CCceEEEcc
Confidence 99987677788888877653 344455677889999999999 799999999999986521 235699999
Q ss_pred ecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCC
Q psy14896 631 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRG 710 (813)
Q Consensus 631 ~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g 710 (813)
+..+|+|.|+|.|.|..|..... ..+.+.|..++....+. ......+.+|++++|.|.+.+ |.+.++|+|+|
T Consensus 433 ~~~~d~G~Y~C~a~n~~g~~~~s-~~~~v~v~~~~~~p~i~------~~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g 504 (642)
T 1e07_A 433 ITEKNSGLYTCQANNSASGHSRT-TVKTITVSAELPKPSIS------SNNSKPVEDKDAVAFTCEPEA-QNTTYLWWVNG 504 (642)
T ss_pred CChhhCeEEEEEEEcCCCCCccc-ceEEEEEeccCCCceEe------cCCceeecCCCeEEEEEECCC-CCcEEEEEECC
Confidence 99999999999999999865432 33556665533222221 122356789999999999995 88999999999
Q ss_pred cccCCCceee--ecceEEEECCCCCCCCEEEEEEEEcCCCceE-EEEEEEEEcCCc-ccccCCceeecCCCeEEEEEEEc
Q psy14896 711 SPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRASNDRSALE-SSVTISIQAEPN-FTIPLTDKHMDNQADLTWTCEAF 786 (813)
Q Consensus 711 ~~l~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~-~~~~l~V~~~P~-~~~~~~~~~~~~g~~~~l~C~~~ 786 (813)
.++..+.++. ..+++|+|.+++.+|+|.|+|.|.|..|... ..+.|.|..+|. +...+.+..+.+|++++|.|.+.
T Consensus 505 ~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~ 584 (642)
T 1e07_A 505 QSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSA 584 (642)
T ss_pred EeCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEec
Confidence 9998766543 3357899999999999999999999999864 479999997665 55667788899999999999999
Q ss_pred ccCCceEEEEECCEecccccccccccC
Q psy14896 787 GVPDVTYSWFRNGELGHQMTDLLLKAV 813 (813)
Q Consensus 787 g~p~~~v~W~k~g~~l~~~~~~~i~~~ 813 (813)
|.|+|.|+|+|||++|..+..+.|.++
T Consensus 585 g~p~p~v~W~~~g~~i~~~~~L~i~~~ 611 (642)
T 1e07_A 585 SNPSPQYSWRINGIPQQHTQVLFIAKI 611 (642)
T ss_pred cCCCCeEEEEECCEECccCceEEECcc
Confidence 999999999999999998888877653
No 3
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=1.2e-62 Score=582.91 Aligned_cols=574 Identities=21% Similarity=0.344 Sum_probs=433.6
Q ss_pred CCCCceeeCCCce-eecCCCccccccEEEEeeeccCCCCeEEEee-cccccccccccccccCCCccEEeeCCeEEEcCCc
Q psy14896 187 PRGPYFIKQPTDV-VFDLSKRSILNDITLSCYAGGYPNPSYEWFK-EDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264 (813)
Q Consensus 187 ~~~P~~~~~p~~~-~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 264 (813)
..+|.|+.+|.+. .+..| +.++|.|++.|.|.|+|+|+| ||..+. .....+....+|+|.|.+.
T Consensus 36 ~~~P~~~~~p~~~~~~~~g-----~~~~l~C~a~g~p~p~~~W~k~~g~~~~--------~~~~~~~~~~~g~l~i~~~- 101 (816)
T 3dmk_A 36 QKGPVFLKEPTNRIDFSNS-----TGAEIECKASGNPMPEIIWIRSDGTAVG--------DVPGLRQISSDGKLVFPPF- 101 (816)
T ss_dssp CEEEEEEECCCSEEEEETT-----TCEEEECEEEEESCCEEEEEETTSCBCC--------CBTTTBEECSTTEEEECCC-
T ss_pred cCCCcEEeCCCCeEEEECC-----CCeEEEeeecCCCCCEEEEEeCCCCCcc--------CCCceEEEeeCCcEEEcCC-
Confidence 3468999999874 46666 669999999999999999999 787652 1223345567899999875
Q ss_pred cccC------CeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCc--ceEEEeecccc
Q psy14896 265 QVED------RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG--VNYYWARDYFP 336 (813)
Q Consensus 265 ~~~d------~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~--~~v~W~k~~~~ 336 (813)
+.+| +|.|+|.|+|..|.+.|..+.|.+...+.+.....+..+.+|+.++|.|.+..+.|. +.+.|++++..
T Consensus 102 ~~~~~~~~~d~G~Y~C~a~n~~G~~~S~~~~v~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~ 181 (816)
T 3dmk_A 102 RAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEE 181 (816)
T ss_dssp CGGGCCHHHHEEEEEEEEEETTEEEEEEEEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCHHHHTTEEEEEEEETTSC
T ss_pred ChHHccccccceEEEEEEecCcceEEccceEEEEEEccccEEEEecceEecCceEEEEECCCccccccEEEEEEEecCce
Confidence 5665 999999999999998888899888777777777778889999999999997544443 79999999876
Q ss_pred cccc---CCccEEEccCccEEEeeeeecCC-eeeEEEEeeeccccCC-CCCceeeEEccCCcccccccCCCCCC--CCCc
Q psy14896 337 NFVE---EDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGR-NGPFFPLKVFPHSNFQQLKFPNNFPK--TFPE 409 (813)
Q Consensus 337 ~~~~---~~~~~~~~~~~~L~i~~v~~~D~-G~Y~C~a~n~~g~~~~-~s~~~~l~v~~~~~~~~~~~~~~~~~--~~~~ 409 (813)
+... .+.|+.+..+|+|.|.+++.+|+ |.|+|.+.|..+.... ......|.|..+... ..|..... ....
T Consensus 182 ~~~~~~~~~~r~~~~~~g~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~~~~~---~~P~i~~~~~~~~~ 258 (816)
T 3dmk_A 182 NYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISS---AVPKVVSLAKFDMK 258 (816)
T ss_dssp EECBSSCBTTTEEECTTSCEEESSCCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEECCCSC---CCCBCCGGGGEEEE
T ss_pred EeccccCCCceEEEecCceEEEecCChhhccceeEEEEeeeeeeeeeecccccceEEeCCCCC---CCCccccccCccce
Confidence 4322 46788999999999999999999 9999999986543222 222345666543211 11111110 1234
Q ss_pred CCCCCCcEEEEEEEeecCCCeeeEeecCCcCCC------CceeccccceEEEccccc-----------------------
Q psy14896 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR------NAYFENFNRILTIPNVKM----------------------- 460 (813)
Q Consensus 410 ~v~~g~~~~l~C~~~g~p~p~i~W~~~~~~l~~------~~~~~~~~~~l~i~~~~~----------------------- 460 (813)
.+.+|+.+.|.|.+.|.|.|.+.|+|++..... ..+.......|.|.++..
T Consensus 259 ~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 338 (816)
T 3dmk_A 259 TYSGSSTMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVL 338 (816)
T ss_dssp EECTTSCEEECCCCBCSSCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EEeCCCeEEEEEEeeecCCCeEEEEeCCCCCccCcceecCCceEeccceEEECCCCHhHCEEEEEEEEcCCCceEEEEEE
Confidence 678999999999999999999999996543221 112222233444444332
Q ss_pred --------------------------------------------------------------ccceEEeCCCce------
Q psy14896 461 --------------------------------------------------------------RGPYFIKQPTDV------ 472 (813)
Q Consensus 461 --------------------------------------------------------------~g~y~~~~~~~~------ 472 (813)
+|.|+|.+.+..
T Consensus 339 ~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 418 (816)
T 3dmk_A 339 TVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESAEAS 418 (816)
T ss_dssp EECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEECSSCEEEEC
T ss_pred EEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCCCCEEEEcCCCHHHCEEEEEEEECCCCcEEEE
Confidence 455666432210
Q ss_pred ---Ee-----------c--ccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEe-----eC---
Q psy14896 473 ---VF-----------D--LSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL-----SG--- 528 (813)
Q Consensus 473 ---~~-----------~--~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~-----~~--- 528 (813)
.+ . ......|+.+.|.|.+.|.|.|.+.|+++|..+.. ..++.. .+
T Consensus 419 ~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~----------~~~~~~~~~~~~~~~~ 488 (816)
T 3dmk_A 419 AELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIAN----------NDRYQVGQYVTVNGDV 488 (816)
T ss_dssp CEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCS----------CTTEEEEEEECTTSCE
T ss_pred EEEEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCC----------CCCcccccEEecCCCc
Confidence 00 0 01225689999999999999999999999965421 111211 12
Q ss_pred -CeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCC
Q psy14896 529 -GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDY 607 (813)
Q Consensus 529 -~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~ 607 (813)
..|.|.++ ..+|+|.|+|.|.|..|.. ...+.|.|..+|.+. ......+..|+.++|.|.+ .+.|.+.|.|+|++
T Consensus 489 ~~~L~i~~v-~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~-~~~~~~v~~G~~v~l~C~~-~g~p~~~i~W~k~~ 564 (816)
T 3dmk_A 489 VSYLNITSV-HANDGGLYKCIAKSKVGVA-EHSAKLNVYGLPYIR-QMEKKAIVAGETLIVTCPV-AGYPIDSIVWERDN 564 (816)
T ss_dssp EEEEEESSC-CTTTCEEEEEEEEETTEEE-EEEEEEEECSSCEEC-CCCCEEEETTCCEEEECCE-ECSSEEEEEEEETT
T ss_pred EEEEEEeec-cccCCEEEEEEEEECCCeE-EEEEEEEEecCCeeE-ccCCeEEecCCeEEEEEEe-cCCCCCEEEEEECC
Confidence 26999997 9999999999999999986 445788887776443 3344567889999999999 78999999999999
Q ss_pred CCCcccCCCeEEEeeCccEEEEeec-ccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCC
Q psy14896 608 FPNFVEEDKRVFVSYDGALYFSALE-QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA 686 (813)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~ 686 (813)
.+ +....+..+..+++|.|.++. .+|+|.|+|.|.|..|... ...+.+.|..+|.+.... .....+.+
T Consensus 565 ~~--l~~~~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~--~~~~~v~v~~~p~~~~~~-------~~~~~~~~ 633 (816)
T 3dmk_A 565 RA--LPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSA--RGSLEVQVMVLPRIIPFA-------FEEGPAQV 633 (816)
T ss_dssp EE--SCCSTTEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEE--EEEEEEEEECCCCCBCCC-------CCSSCEES
T ss_pred eE--cccCCceEEecCCeEEEEecCccccCEEEEEEEEECCCcee--eeeEEEEEecCCcccccc-------ccccccCC
Confidence 76 344556677788999999998 6999999999999988543 234677777777654321 12255789
Q ss_pred CCeEEEEEEecCCCCC-eEEEEeCCcccCCCcee-----eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEc
Q psy14896 687 GDKVRLECVAFGYPVP-SYNWTRRGSPLPRNAYF-----ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 760 (813)
Q Consensus 687 G~~v~l~C~~~g~P~p-~i~W~k~g~~l~~~~~~-----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 760 (813)
|+.++|.|.+.+.|+| .|+|+|+|..+..+..+ ....+.|+|.+++.+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 634 G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 713 (816)
T 3dmk_A 634 GQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYV 713 (816)
T ss_dssp SCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEE
T ss_pred CCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEe
Confidence 9999999999876655 99999999998655422 12356899999999999999999999999999999999999
Q ss_pred CCcccccCCceeecCCCeEEEEEEEcccCCceEEEEECCEec
Q psy14896 761 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELG 802 (813)
Q Consensus 761 ~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~g~~l 802 (813)
||.|...+.+..+.+|++++|.|.+.|.|+|.|+|+|+|..+
T Consensus 714 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~ 755 (816)
T 3dmk_A 714 PPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDT 755 (816)
T ss_dssp EEEEEECCCCEEEETTCCEEEECEEEEESCCEEECCEECSSS
T ss_pred CCceeeecccceecCCCcEEEEEEEecCCCCeEEEEecCCCC
Confidence 999998888899999999999999999999999999988654
No 4
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=1.1e-62 Score=556.37 Aligned_cols=501 Identities=19% Similarity=0.271 Sum_probs=381.3
Q ss_pred EEEeeccccccceeeccCCCceeeeeeecccccceEeeccccceeeeeeeCCCCCCCCCceeeCCCceeecCCCcccccc
Q psy14896 132 AYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILND 211 (813)
Q Consensus 132 ~~~~~~~~~~l~i~~~~~~d~~~y~C~~~~~~~~~~~~~~~~~~~~l~v~~p~~~~~~P~~~~~p~~~~v~~g~~~~g~~ 211 (813)
.+....+...|.|.++..+|.|.|.|.+.+.. + .......|.|..+ ..+|.|...+.+..+.+| ++
T Consensus 53 ~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~----g--~~~~~~~l~v~~~---~~~p~~~~~~~~~~~~~G-----~~ 118 (570)
T 3b43_A 53 KMQFKNNVASLVINKVDHSDVGEYTCKAENSV----G--AVASSAVLVIKER---KLPPSFARKLKDVHETLG-----FP 118 (570)
T ss_dssp EEECCTTEEEEEESSCCGGGCEEEEEEEEETT----E--EEEEEEEEEECCC---CCCCEESSCCCCEEEETT-----SC
T ss_pred EEEEECCEEEEEEccCChhhCEEEEEEEEeCC----c--eEEEEEEEEECCC---CCCCcccccCCCeEecCC-----Ce
Confidence 34444444579999999999999999997644 2 2233344555433 236888888888887776 67
Q ss_pred EEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEe--eCCeEEEcCCccccCCeeEEEEeecCceeeEeeeeE
Q psy14896 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL--SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQ 289 (813)
Q Consensus 212 v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~ 289 (813)
+.|.|.+.|.|.|.|+|||||..+... ....... ..++|.|.+. +.+|+|.|+|.|.|..|.. +..+.
T Consensus 119 v~l~C~~~g~p~~~v~W~k~g~~l~~~--------~~~~~~~~~~~~~L~i~~~-~~~d~G~Y~C~a~n~~g~~-~~~~~ 188 (570)
T 3b43_A 119 VAFECRINGSEPLQVSWYKDGELLKDD--------ANLQTSFIHNVATLQILQT-DQSHVGQYNCSASNPLGTA-SSSAK 188 (570)
T ss_dssp EEEEEEEESSSSCEEEEEETTEECCCC--------SSEEEEEETTEEEEEESSC-CGGGCEEEEEEEEETTEEE-EEEEE
T ss_pred EEEEEEEccCCCCEEEEEECCEECcCC--------CCEEEEEECCEEEEEECcC-ChHHCEEEEEEEEeCCcEE-EEEEE
Confidence 999999999999999999999876321 1111111 2356888875 8999999999999999987 45566
Q ss_pred Eeeee---ecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEcc-CccEEEeeeeecCCee
Q psy14896 290 LAFGF---IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365 (813)
Q Consensus 290 l~v~~---~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~-~~~L~i~~v~~~D~G~ 365 (813)
|.|.. +|.+...+....+.+|+.++|.|.+ .|.|.++++|+|||.++......++.... .++|.|.+++.+|+|.
T Consensus 189 l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~~-~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 267 (570)
T 3b43_A 189 LTLSEHEVPPFFDLKPVSVDLALGESGTFKCHV-TGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQ 267 (570)
T ss_dssp EEEECCCCCCEEEECCCCBCCBSBSCEEEEEEE-ESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEE
T ss_pred EEEcCCCCCCccccCCceeEecCCCeEEEEEEE-EECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCcccCEE
Confidence 66543 3344455666778889999999996 67899999999999886443333343333 3589999999999999
Q ss_pred eEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeecCCCeeeEeecCCcCCCCce
Q psy14896 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY 445 (813)
Q Consensus 366 Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~~~~l~~~~~ 445 (813)
|+|.|.|..|... ..+.|.|..+|.+.....+ ...+.+|+.+.|.|.+.|+|.|.+.|+|++.++.....
T Consensus 268 Y~C~a~N~~g~~~---~~~~l~V~~~p~~~~~~~~-------~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~ 337 (570)
T 3b43_A 268 YTCYASNVAGKDS---CSAQLGVQEPPRFIKKLEP-------SRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSK 337 (570)
T ss_dssp EEEEEEETTEEEE---EEEEECCBCCCEEEECCCS-------BCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSS
T ss_pred EEEEEECCCCcEE---EEEEEEeecCCcccccCCC-------ccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCc
Confidence 9999999887643 3477888776654322111 13467888899999888888888888888877643211
Q ss_pred eccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEE
Q psy14896 446 FENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFT 525 (813)
Q Consensus 446 ~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~ 525 (813)
+ +..
T Consensus 338 ~----------------------------------------------------------------------------~~~ 341 (570)
T 3b43_A 338 F----------------------------------------------------------------------------RMS 341 (570)
T ss_dssp E----------------------------------------------------------------------------EEE
T ss_pred E----------------------------------------------------------------------------EEE
Confidence 1 111
Q ss_pred e--eCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCCccEEEE
Q psy14896 526 L--SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYW 603 (813)
Q Consensus 526 ~--~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W 603 (813)
. ..+.|.|.++ ..+|+|.|+|.|.|..|... ..+.|.|..+|.+...+.+..+.+|+.++|.|.+ .|.|.+.|+|
T Consensus 342 ~~~~~~~L~i~~v-~~~D~G~Y~C~a~N~~g~~~-~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~-~g~P~p~v~W 418 (570)
T 3b43_A 342 FVESVAVLEMYNL-SVEDSGDYTCEAHNAAGSAS-SSTSLKVKEPPVFRKKPHPVETLKGADVHLECEL-QGTPPFQVSW 418 (570)
T ss_dssp EETTEEEEEEESC-CGGGCEEEEEEEEBTTBCCE-EEEEECEECCCEECSCCCCEEECTTCCEEEEEEE-ESSSSCCCEE
T ss_pred EECCEEEEEECCC-CcccCEEEEEEEEeCCCEEE-EEEEEEecCCCeeecCCCceeecCCCEEEEEEEE-ecCCCCEEEE
Confidence 1 1246899997 99999999999999999874 4478999999988777777778899999999999 7999999999
Q ss_pred ccCCCCCcccCCCeEEEeeC---ccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCC
Q psy14896 604 ARDYFPNFVEEDKRVFVSYD---GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF 680 (813)
Q Consensus 604 ~k~~~~~~~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~ 680 (813)
+|+|.++ ..+.++.+..+ ++|.|.++..+|+|.|+|.|.|..|.... .+.|.|..+|.+.. .+.
T Consensus 419 ~k~g~~l--~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~---~~~l~v~~~P~~~~--------~~~ 485 (570)
T 3b43_A 419 HKDKREL--RSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTC---VGSITLKAPPRFVK--------KLS 485 (570)
T ss_dssp EETTEEC--CSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEE---EEEEEECCCCEEEE--------CCC
T ss_pred EECCEEC--cCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEE---EEEEEeccCCcccc--------cCC
Confidence 9999763 34455555444 36999999999999999999999987543 47788888886653 223
Q ss_pred CcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccC-CCcee----eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEE
Q psy14896 681 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLP-RNAYF----ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 755 (813)
Q Consensus 681 ~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 755 (813)
...+.+|+.++|.|.+.|.|+|.|+|+|+|..+. .+.++ ....++|.|.+++.+|+|.|+|.|.|.+|.+++++.
T Consensus 486 ~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~ 565 (570)
T 3b43_A 486 DISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFAT 565 (570)
T ss_dssp CBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEE
T ss_pred CceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEE
Confidence 3678899999999999999999999999986553 33322 233568999999999999999999999999999999
Q ss_pred EEEE
Q psy14896 756 ISIQ 759 (813)
Q Consensus 756 l~V~ 759 (813)
|.|.
T Consensus 566 L~V~ 569 (570)
T 3b43_A 566 LSVL 569 (570)
T ss_dssp ECCB
T ss_pred EEEe
Confidence 9885
No 5
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=1.2e-60 Score=550.13 Aligned_cols=537 Identities=18% Similarity=0.290 Sum_probs=405.3
Q ss_pred ccceeeccCCCceeeeeeecccccceEeeccccceeeeeeeCCCCCCCCCceeeCCCceeecCCCccccccEEEEeeecc
Q psy14896 141 RWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGG 220 (813)
Q Consensus 141 ~l~i~~~~~~d~~~y~C~~~~~~~~~~~~~~~~~~~~l~v~~p~~~~~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g 220 (813)
.|.|.+++..|.|.|.|.+.+... +.....+.|.|..++ .+|.|...+ ...+.+| +.+.|.|.+.|
T Consensus 72 sL~I~~v~~~D~G~Y~C~~~~~~~-----~~~~~~~~l~V~~~~---~~p~i~~~~-~~~v~~g-----~~v~l~C~~~~ 137 (642)
T 1e07_A 72 SLLIQNIIQNDTGFYTLHVIKSDL-----VNEEATGQFRVYPEL---PKPSISSNN-SKPVEDK-----DAVAFTCEPET 137 (642)
T ss_pred cEEECCCCcccCcEEEEEEEcCCC-----eEEEEEEEEEecccC---CCCcEEccC-ceeEecC-----CcEEEEEECCC
Confidence 799999999999999999965321 112344557776543 246665543 3444444 77999999999
Q ss_pred CCCCeEEEeecccccccccccccccCCCccEEe--eCCeEEEcCCccccCCeeEEEEeecCceeeEeeeeEEeeeeecc-
Q psy14896 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL--SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE- 297 (813)
Q Consensus 221 ~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~- 297 (813)
|.+.|+|||+|..+. .+.++.+ .+++|.|.+. +.+|+|.|+|.|.|..|...+..+.|.|.+.|.
T Consensus 138 -p~~~v~W~~~g~~l~----------~~~~~~~~~~~~~L~i~~~-~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~ 205 (642)
T 1e07_A 138 -QDATYLWWVNNQSLP----------VSPRLQLSNGNRTLTLFNV-TRNDTASYKCETQNPVSARRSDSVILNVLYGPDA 205 (642)
T ss_pred -CCeeEEEEECCeECC----------CCCceEEcCCCCEEEEeCC-CcccCeeEEEEEecCCCCcccceEEEEEEeCCCC
Confidence 999999999998762 2233333 3567888875 899999999999999887667788999887655
Q ss_pred cccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEccCccEEEeeeeecCCeeeEEEEeeecccc
Q psy14896 298 FNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDT 377 (813)
Q Consensus 298 ~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 377 (813)
+.+.+....+.+|+.++|.|.+ .|+|.++++|+|||.++ ..++.|.|.+++.+|+|.|+|.|.|..|..
T Consensus 206 ~~~~~~~~~~~~G~~~~l~C~~-~g~p~~~i~W~~~g~~i----------~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 274 (642)
T 1e07_A 206 PTISPLNTSYRSGENLNLSCHA-ASNPPAQYSWFVNGTFQ----------QSTQELFIPNITVNNSGSYTCQAHNSDTGL 274 (642)
T ss_pred cEEecCCcccccCCEEEEEEEc-CCCCCcEEEEEECCeEc----------ccCCceEEecccccCCeEEEEEEEeCCCce
Confidence 3444556678899999999997 88999999999999864 234679999999999999999999988753
Q ss_pred CCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeecCCCeeeEeecCCcCCCCceec--cccceEEE
Q psy14896 378 GRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTI 455 (813)
Q Consensus 378 ~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~~~~l~~~~~~~--~~~~~l~i 455 (813)
.. +..+.|.|..++....+..+ ....+..|+.+.|.|.+.+.| +.+.|++++..+....++. ..+..|.|
T Consensus 275 ~~-s~~~~v~v~~~~~~p~i~~~------~~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~~L~i 346 (642)
T 1e07_A 275 NR-TTVTTITVYAEPPKPFITSN------NSNPVEDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTL 346 (642)
T ss_pred EE-eeeEEEEEEccCCCCEEEcC------CceeEecCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeCCCCEEEE
Confidence 32 33456777654332222211 123456688899999999987 7999999999987655443 34577888
Q ss_pred cccc--cccceEEeCCCce--------Eec----c---------cccccccCeEEEEEeeccCCCcEEEeecccccccee
Q psy14896 456 PNVK--MRGPYFIKQPTDV--------VFD----L---------SKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLV 512 (813)
Q Consensus 456 ~~~~--~~g~y~~~~~~~~--------~~~----~---------~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~ 512 (813)
.++. ++|.|+|.+.+.. .+. + .....|+.++|.|.+.|.|.+.|+|+|+|..+.
T Consensus 347 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~--- 423 (642)
T 1e07_A 347 LSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQ--- 423 (642)
T ss_pred eccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcC---
Confidence 8775 4899999875432 111 0 122578999999999999999999999996531
Q ss_pred ccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEee-cEEEEEeecc--cccccCCCceeccCCCceEE
Q psy14896 513 ANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISE-SVQLAFGFIG--EFNLKRAPEIGNQNWGKAMF 589 (813)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~-~~~l~v~~~p--~~~~~~~~~~~~~g~~~~l~ 589 (813)
.+..|.|.++ ..+|+|.|+|.|.|..|..... .+.+.|..++ ..........+.+|+.++|.
T Consensus 424 --------------~~~~L~i~~~-~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~ 488 (642)
T 1e07_A 424 --------------HTQELFISNI-TEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFT 488 (642)
T ss_pred --------------CCceEEEccC-ChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEecCCceeecCCCeEEEE
Confidence 2357999997 9999999999999998865332 3455554322 11122334556789999999
Q ss_pred eCCCCCCCccEEEEccCCCCCcccCCCeEEEee-CccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCcc
Q psy14896 590 CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ 668 (813)
Q Consensus 590 C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~ 668 (813)
|.+. .|.+.++|+|+|.+ +....++.+.. +++|.|.++..+|+|.|+|.|.|..|...+ ..+.|.|..+|...
T Consensus 489 C~~~--~~~~~i~W~~~g~~--l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s--~~~~l~V~~~p~~~ 562 (642)
T 1e07_A 489 CEPE--AQNTTYLWWVNGQS--LPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRS--DPVTLDVLYGPDTP 562 (642)
T ss_pred EECC--CCCcEEEEEECCEe--CCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccC--CCEEEEEEeCCCcc
Confidence 9994 48899999999986 34445666554 457999999999999999999999986433 24678888766543
Q ss_pred ccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCC
Q psy14896 669 QLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 748 (813)
Q Consensus 669 ~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 748 (813)
.+ .+....+.+|+.++|.|.+.|.|+|.|+|+|||.+|.. ...|.|.+++.+|+|.|+|.|.|.+|
T Consensus 563 ~~-------~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~-------~~~L~i~~~~~~d~G~Y~C~a~N~~G 628 (642)
T 1e07_A 563 II-------SPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQH-------TQVLFIAKITPNNNGTYACFVSNLAT 628 (642)
T ss_pred ee-------cCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECcc-------CceEEECcccccCCeEEEEEEEeccc
Confidence 32 12236788999999999999999999999999998864 35899999999999999999999999
Q ss_pred ceEEEEEEEEEc
Q psy14896 749 ALESSVTISIQA 760 (813)
Q Consensus 749 ~~~~~~~l~V~~ 760 (813)
.++.++.|.|..
T Consensus 629 ~~~~s~~l~V~v 640 (642)
T 1e07_A 629 GRNNSIVKSITV 640 (642)
T ss_pred CcceeEEEEEEE
Confidence 999999888864
No 6
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=1.3e-59 Score=556.87 Aligned_cols=569 Identities=21% Similarity=0.286 Sum_probs=418.6
Q ss_pred ccceeeccCCCc-eeeeeeecccccceEeeccccceeeeeeeCCCCCCCCCceeeCC--CceeecCCCccccccEEEEee
Q psy14896 141 RWGFERVTGMEP-LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP--TDVVFDLSKRSILNDITLSCY 217 (813)
Q Consensus 141 ~l~i~~~~~~d~-~~y~C~~~~~~~~~~~~~~~~~~~~l~v~~p~~~~~~P~~~~~p--~~~~v~~g~~~~g~~v~l~C~ 217 (813)
.|.|.++..+|. |.|.|.+.+........ ......|.|..|.. ..+|.|...+ ....+.+| ++++|.|.
T Consensus 200 ~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~--s~~~~~l~v~~~~~-~~~P~i~~~~~~~~~~v~~g-----~~v~L~C~ 271 (816)
T 3dmk_A 200 ELHIREVGPEDGYKSYQCRTKHRLTGETRL--SATKGRLVITEPIS-SAVPKVVSLAKFDMKTYSGS-----STMALLCP 271 (816)
T ss_dssp CEEESSCCGGGSSCEEEEEEEETTTCCEEE--CSBCEEEEEECCCS-CCCCBCCGGGGEEEEEECTT-----SCEEECCC
T ss_pred eEEEecCChhhccceeEEEEeeeeeeeeee--cccccceEEeCCCC-CCCCccccccCccceEEeCC-----CeEEEEEE
Confidence 689999999998 99999996533221111 11223455555432 2356665443 34555555 77999999
Q ss_pred eccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccCCeeEEEEeecCceeeEeeeeEEeeeeecc
Q psy14896 218 AGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE 297 (813)
Q Consensus 218 ~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~ 297 (813)
+.|.|.|.|.|||++....... ......+....+++|.|.+. +.+|+|.|+|.|.|..|.. +..+.|.|..++.
T Consensus 272 ~~g~p~p~v~W~k~~~~~~~~~----~~~~~~~~~~~~~~L~i~~v-~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~ 345 (816)
T 3dmk_A 272 AQGYPVPVFRWYKFIEGTTRKQ----AVVLNDRVKQVSGTLIIKDA-VVEDSGKYLCVVNNSVGGE-SVETVLTVTAPLS 345 (816)
T ss_dssp CBCSSCCEEEEEEECTTSSCEE----ECCCSSSEEEETTEEEECSC-CGGGCEEEEEEEECSSCEE-EEEEEEEECEEEE
T ss_pred eeecCCCeEEEEeCCCCCccCc----ceecCCceEeccceEEECCC-CHhHCEEEEEEEEcCCCce-EEEEEEEEcCCCc
Confidence 9999999999999765332111 11233455566889999886 8999999999999999976 6678888887777
Q ss_pred cccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEccCccEEEeeeeecCCeeeEEEEeeecccc
Q psy14896 298 FNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDT 377 (813)
Q Consensus 298 ~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 377 (813)
+.+.+....+.+|+.++|.|.+ .|.|.+.++|+|||.++.. .++.|.|.+++.+|+|.|+|.|.|..|..
T Consensus 346 ~~~~~~~~~v~~G~~v~l~C~~-~g~p~~~v~W~k~g~~~~~---------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 415 (816)
T 3dmk_A 346 AKIDPPTQTVDFGRPAVFTCQY-TGNPIKTVSWMKDGKAIGH---------SESVLRIESVKKEDKGMYQCFVRNDRESA 415 (816)
T ss_dssp EEEESSEEECCTTSCEEEEEEE-EEECCCEEEEEETTEECSC---------CSSEEEESSCCGGGCEEEEEEEECSSCEE
T ss_pred eeeCCCceEecCCCCEEEEEEE-eccCCCEEEEEECCEECCC---------CCCEEEEcCCCHHHCEEEEEEEECCCCcE
Confidence 7777777788899999999995 6789999999999987421 24679999999999999999999987643
Q ss_pred CCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeecCCCeeeEeecCCcCCCCceecc---------
Q psy14896 378 GRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN--------- 448 (813)
Q Consensus 378 ~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~~~~l~~~~~~~~--------- 448 (813)
... +.|.|..... +|..........+.+|+.+.|.|.+.|+|.|.++|++++..+.....+..
T Consensus 416 ~~~---~~l~v~~~~~-----~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~ 487 (816)
T 3dmk_A 416 EAS---AELKLGGRFD-----PPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGD 487 (816)
T ss_dssp EEC---CEEECCCSSC-----CCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSC
T ss_pred EEE---EEEEEccccC-----CCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCC
Confidence 322 4555542211 11111112234688999999999999999999999999999876554331
Q ss_pred ccceEEEcccc--cccceEEeCCCceEe-------c-----------ccccccccCeEEEEEeeccCCCcEEEeeccccc
Q psy14896 449 FNRILTIPNVK--MRGPYFIKQPTDVVF-------D-----------LSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQ 508 (813)
Q Consensus 449 ~~~~l~i~~~~--~~g~y~~~~~~~~~~-------~-----------~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~ 508 (813)
....|.|.++. ++|.|+|.+.+.... . ......|+.+.|.|.+.|.|.+.|.|+|+|..+
T Consensus 488 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l 567 (816)
T 3dmk_A 488 VVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRAL 567 (816)
T ss_dssp EEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCEECCCCCEEEETTCCEEEECCEECSSEEEEEEEETTEES
T ss_pred cEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCeeEccCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEc
Confidence 12358888765 489999987543211 0 112356899999999999999999999999653
Q ss_pred cceeccccCCCCCceEEeeCCeEEEeCCCC-CCCCceEEEEEEcCceeEEeecEEEEEeeccccccc-CCCceeccCCCc
Q psy14896 509 DRLVANLIDPLSDKRFTLSGGNLIINDPRQ-VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIGNQNWGK 586 (813)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~-~~~~~~~~g~~~ 586 (813)
. .........+++|.|.++ . .+|+|.|+|.|.|..|...+..+.+.|..+|.+... .....+..|+.+
T Consensus 568 ~---------~~~~~~~~~~~~l~i~~v-~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v 637 (816)
T 3dmk_A 568 P---------INRKQKVFPNGTLIIENV-ERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYL 637 (816)
T ss_dssp C---------CSTTEEECTTSEEEESSC-CHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEE
T ss_pred c---------cCCceEEecCCeEEEEec-CccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeE
Confidence 2 122223346789999997 5 589999999999999976666778888777765432 344567889999
Q ss_pred eEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEe--eCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccC
Q psy14896 587 AMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS--YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPH 664 (813)
Q Consensus 587 ~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~ 664 (813)
+|.|.+..+.+++.|+|+|+|.++........... ..++|.|.+++.+|+|.|+|.|.|..|.... .+.|.|..+
T Consensus 638 ~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~---~~~l~V~~~ 714 (816)
T 3dmk_A 638 TLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQF---TTPLNVYVP 714 (816)
T ss_dssp EEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEE---EEEECEEEE
T ss_pred EEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEE---EEEEEEEeC
Confidence 99999955555669999999987532222222211 1246999999999999999999999987543 467888887
Q ss_pred CCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCC-------ceeeecceEEEECCCCCCCCE
Q psy14896 665 SNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-------AYFENFNRILTIPNVKVEDQG 737 (813)
Q Consensus 665 p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~-------~~~~~~~~~L~i~~v~~~d~G 737 (813)
|.+... +....+.+|++++|.|.+.|.|+|.|+|+|++..+... .+....+++|.|.+++.+|+|
T Consensus 715 P~~~~~--------~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 786 (816)
T 3dmk_A 715 PRWILE--------PTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEG 786 (816)
T ss_dssp EEEEEC--------CCCEEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEEEETTEEEECSCCGGGCE
T ss_pred Cceeee--------cccceecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEEecCCEEEECcCChhhCe
Confidence 765421 12356789999999999999999999999998665432 223334568999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEEEcCC
Q psy14896 738 EYICRASNDRSALESSVTISIQAEP 762 (813)
Q Consensus 738 ~Y~C~a~N~~G~~~~~~~l~V~~~P 762 (813)
.|+|+|.|.+|++..++.+..+..|
T Consensus 787 ~Y~C~a~N~~G~~~~~v~~~~~~~~ 811 (816)
T 3dmk_A 787 YYLCEAINGIGSGLSAVIMISVQAH 811 (816)
T ss_dssp EEEEEEECSSSSCEEEEEEEEEEC-
T ss_pred EEEEEEEeCCCCCcEEEEEEEeecc
Confidence 9999999999999999988887654
No 7
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=1.6e-56 Score=528.31 Aligned_cols=579 Identities=17% Similarity=0.201 Sum_probs=118.5
Q ss_pred ccceeeccCCCceeeeeeecccccceEeeccccceeeeeeeCCCCCCCCCceeeCCCceeecCCCccccccEEEEeeecc
Q psy14896 141 RWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGG 220 (813)
Q Consensus 141 ~l~i~~~~~~d~~~y~C~~~~~~~~~~~~~~~~~~~~l~v~~p~~~~~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g 220 (813)
.|.|.+++..|.|.|.|.+.. ...+..+.|.|..|.. +..|.+...+..+.+.+|.. ++++|.|.+.+
T Consensus 87 ~l~I~~~~~~d~G~Y~C~~~~--------~~~~~~~~v~v~~~~~-~~~~~~~~~~~~~~v~~G~~---~~v~L~C~~~~ 154 (772)
T 3v2a_R 87 TLTIPKVIGNDTGAYKCFYRE--------TDLASVIYVYVQDYRS-PFIASVSDQHGVVYITENKN---KTVVIPCLGSI 154 (772)
T ss_dssp ------------------------------------------------------CEEEEEEESSCC---CEEEECCCCSC
T ss_pred EEEECCCcHhhCEeEEEEEcC--------CCEEEEEEEEECCCCC-CceEcCcccceeEEEecCCC---CeEEEEccCCC
Confidence 688889999999999999851 2223333444443321 10111223345566655511 66999999987
Q ss_pred CCCCeEEEeec--ccccccccccccccCCCccEEee-CCeEEEcCCccccCCeeEEEEeecCceeeEeeeeEEeeeeec-
Q psy14896 221 YPNPSYEWFKE--DYVQDRLVANLIDPLSDKRFTLS-GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG- 296 (813)
Q Consensus 221 ~P~p~v~W~k~--g~~l~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~- 296 (813)
|.+.+.|+|+ +..+. ..+...... ...|.|.+. +.+|+|.|+|.|.+..+...+....+.+...+
T Consensus 155 -p~~~v~w~~~~~~~~~~---------~~~~~~~~~~~~~l~i~~~-~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~ 223 (772)
T 3v2a_R 155 -SNLNVSLCARYPEKRFV---------PDGNRISWDSKKGFTIPSY-MISYAGMVFCEAKINDESYQSIMYIVVVVGYRI 223 (772)
T ss_dssp -SSCCEEEEEETTTEEEC---------CCSSSCEEETTTEEEEEGG-GTTTCSEEEEEEEETTEEEECCEEEEEEECCCE
T ss_pred -CCcEEEEEecCCCcccc---------CCCceeecCCCCCeEecCC-ChhhCeEEEEEEEECCceEEEEEEEEEEecCcc
Confidence 8899999998 65431 122222333 456777774 89999999999998766554544555554332
Q ss_pred -ccccCCC-CceeecCCCeEEEecCCCC-CCcceEEEeeccccccccCCcc---------EEEccCccEEEeeeeecCCe
Q psy14896 297 -EFNLKRA-PEIGNQNWGKAMFCDPPTN-YPGVNYYWARDYFPNFVEEDKR---------VFVSYDGALYFSALEQIDAG 364 (813)
Q Consensus 297 -~~~~~~~-~~~~~~~~~~~l~C~~~~~-~p~~~v~W~k~~~~~~~~~~~~---------~~~~~~~~L~i~~v~~~D~G 364 (813)
.+.+.+. +..+.+|+.++|.|.+... .|.+.+.|++++..+....... ......+.|.|.+++.+|+|
T Consensus 224 ~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 303 (772)
T 3v2a_R 224 YDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQG 303 (772)
T ss_dssp EEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCS
T ss_pred ceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCe
Confidence 2333333 3578899999999997432 5668999999988642211110 00112347999999999999
Q ss_pred eeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeecCCCeeeEeecCCcCCCCc
Q psy14896 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444 (813)
Q Consensus 365 ~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~~~~l~~~~ 444 (813)
.|+|.|.|..+.. +..+.|.|..+|.+..... ......+.+|+.+.|.|.+.|+|.|.+.|++++.++....
T Consensus 304 ~Y~C~~~~~~~~~---~~~~~l~V~~~p~~~~~~~-----~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~ 375 (772)
T 3v2a_R 304 LYTCAASSGLMTK---KNSTFVRVHEKPFVAFGSG-----MESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNH 375 (772)
T ss_dssp EEEEEEECSSCEE---EEEEEEEEECCCC---------------------------------------------------
T ss_pred EEEEEEEcCCcce---eEEEEEEEeCCCeeEeccC-----CCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCc
Confidence 9999999877643 3347788877654322110 1123568999999999999999999999999999987754
Q ss_pred eeccccceEEEcccc--cccceEEeCCCceE---------ec----c-----------cccccccCeEEEEEeeccCCCc
Q psy14896 445 YFENFNRILTIPNVK--MRGPYFIKQPTDVV---------FD----L-----------SKRSILNDITLSCYAGGYPNPS 498 (813)
Q Consensus 445 ~~~~~~~~l~i~~~~--~~g~y~~~~~~~~~---------~~----~-----------~~~~~g~~~~l~C~~~g~p~~~ 498 (813)
.+. ....|.|.++. ++|.|+|.+.+... +. + .....|+.++|.|.+.|.|.|.
T Consensus 376 ~~~-~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~ 454 (772)
T 3v2a_R 376 TIK-AGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPH 454 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEc-cceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccccCCCCcEEEEeEeccCCCCc
Confidence 433 34677777765 47999998654321 00 0 1145689999999999999997
Q ss_pred -EEEeecccccccee------------------------ccccCCCCCceEEe-e-----CCeEEEeCCCCCCCCceEEE
Q psy14896 499 -YEWFKEDYVQDRLV------------------------ANLIDPLSDKRFTL-S-----GGNLIINDPRQVEDRGSYHC 547 (813)
Q Consensus 499 -v~W~k~~~~~~~~~------------------------~~~~~~~~~~~~~~-~-----~~~l~i~~~~~~~d~G~Y~C 547 (813)
|.|++++....... ...+... ..+... . ...|.|.++ +|+|.|+|
T Consensus 455 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~-~~~~~~~~~~~~~~~~L~i~~~---~d~G~Y~C 530 (772)
T 3v2a_R 455 HIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVN-KNQFALIEGKNKTVSTLVIQAA---NVSALYKC 530 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEcCCccccccccccccccCcCccccccccccccCCCcEEEe-ccceeeccCcceEEEEEEEeec---ccCeEEEE
Confidence 99999753210000 0000000 011111 1 146666653 79999999
Q ss_pred EEEcCceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEE--------
Q psy14896 548 KASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVF-------- 619 (813)
Q Consensus 548 ~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~-------- 619 (813)
.|.|..|.. +..+.|.|..+|.+...+. ..+.+|+.++|.|.+ .+.|.+.|+|+|++..+.........
T Consensus 531 ~a~N~~g~~-~~~~~l~V~~~p~i~~~p~-~~~~~G~~v~l~C~~-~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~ 607 (772)
T 3v2a_R 531 EAVNKVGRG-ERVISFHVTRGPEITLQPD-MQPTEQESVSLWCTA-DRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLD 607 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEcccccc-ceeEEEEEECCceeeccCC-cccccCCceEEEEec-cCCCCCCcEEEEcCCcccccccCccccccccccc
Confidence 999999976 3447788877776554433 346789999999999 78899999999998653222111111
Q ss_pred --------EeeC-----ccEEEEeecccCCeeEEEEEEeeecCccc-cCceeeEEEccCCCccccccCCCCCCCCCcCCC
Q psy14896 620 --------VSYD-----GALYFSALEQIDAGNYSCNVQSKVSDTGR-NGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK 685 (813)
Q Consensus 620 --------~~~~-----~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~ 685 (813)
...+ .+|.|.++..+|+|.|+|.|.|..|.... ....+.+.+..+|.+.. .+....+.
T Consensus 608 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~--------~~~~~~v~ 679 (772)
T 3v2a_R 608 TLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITG--------NLENQTTS 679 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeec--------CCCceEEe
Confidence 0012 23999999999999999999997654322 22233344455554432 22336789
Q ss_pred CCCeEEEEEEecCCCCCeEEEEeCCcccCCCcee--eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCc
Q psy14896 686 AGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF--ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPN 763 (813)
Q Consensus 686 ~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~ 763 (813)
+|++++|.|.+.|.|.|.|+|+|||.+|..+.++ ....++|.|.++..+|+|.|+|+|.|.+|.+++++.|.|.++|.
T Consensus 680 ~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~ 759 (772)
T 3v2a_R 680 IGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQE 759 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEcCCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEECCCC
Confidence 9999999999999999999999999999876543 33367899999999999999999999999999999999999998
Q ss_pred ccc
Q psy14896 764 FTI 766 (813)
Q Consensus 764 ~~~ 766 (813)
...
T Consensus 760 ~~~ 762 (772)
T 3v2a_R 760 KTN 762 (772)
T ss_dssp ---
T ss_pred ccc
Confidence 653
No 8
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=4.2e-55 Score=516.24 Aligned_cols=568 Identities=17% Similarity=0.227 Sum_probs=101.1
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccC
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 268 (813)
+|.|...+....+..| ++|+|.|.+.+ .+.|++++..........+....+. ....+|.|.+. +.+|
T Consensus 31 ~p~l~~~~~~~~v~~G-----~~vtL~C~~~~----~v~W~~~~~~~~~~~~~~~~~~~~~---~~~~~l~I~~~-~~~d 97 (772)
T 3v2a_R 31 LPRLSIQKDILTIKAN-----TTLQITCRGQR----DLDWLWPNNQSGSEQRVEVTECSDG---LFCKTLTIPKV-IGND 97 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEECCCCCeEEEcCC-----CCEEEEEeccC----CeeeeCCCCCCccCCceeEEEcCCC---cEEEEEEECCC-cHhh
Confidence 5667666677777777 66999999764 6899988753211100000000000 01346777775 8999
Q ss_pred CeeEEEEeecCceeeEeeeeEEeeeeecccccC-----CCCceeecC--CCeEEEecCCCCCCcceEEEeec--cccccc
Q psy14896 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-----RAPEIGNQN--WGKAMFCDPPTNYPGVNYYWARD--YFPNFV 339 (813)
Q Consensus 269 ~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~-----~~~~~~~~~--~~~~l~C~~~~~~p~~~v~W~k~--~~~~~~ 339 (813)
+|.|+|.+.+.. .+..+.|.|..+..+.+. .....+.+| +.++|.|.+.. |.+.++|+|+ +..+.
T Consensus 98 ~G~Y~C~~~~~~---~~~~~~v~v~~~~~~~~~~~~~~~~~~~v~~G~~~~v~L~C~~~~--p~~~v~w~~~~~~~~~~- 171 (772)
T 3v2a_R 98 TGAYKCFYRETD---LASVIYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSI--SNLNVSLCARYPEKRFV- 171 (772)
T ss_dssp -------------------------------------CEEEEEEESSCCCEEEECCCCSC--SSCCEEEEEETTTEEEC-
T ss_pred CEeEEEEEcCCC---EEEEEEEEECCCCCCceEcCcccceeEEEecCCCCeEEEEccCCC--CCcEEEEEecCCCcccc-
Confidence 999999998321 144556665533332221 233456668 77999999743 8899999998 55432
Q ss_pred cCCccEEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcc-cccccCCCCCCCCCcCCCCCCcEE
Q psy14896 340 EEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF-QQLKFPNNFPKTFPEAPKAGDKVR 418 (813)
Q Consensus 340 ~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~-~~~~~~~~~~~~~~~~v~~g~~~~ 418 (813)
.............|.|.+++.+|+|.|+|.+.+... ...+..+.+.+...+.. ..+.++ .+..+.+|+.+.
T Consensus 172 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~--~~~s~~~~~~v~~~~~~~v~~~~~------~~~~v~~G~~v~ 243 (772)
T 3v2a_R 172 PDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDE--SYQSIMYIVVVVGYRIYDVVLSPS------HGIELSVGEKLV 243 (772)
T ss_dssp CCSSSCEEETTTEEEEEGGGTTTCSEEEEEEEETTE--EEECCEEEEEEECCCEEEEEEECC------SCEEEETTCCEE
T ss_pred CCCceeecCCCCCeEecCCChhhCeEEEEEEEECCc--eEEEEEEEEEEecCccceeeeCCC------CceEEecCCcEE
Confidence 223333445566899999999999999999997533 22233344444332221 111111 124689999999
Q ss_pred EEEEEee--cCCCeeeEeecCCcCCCCcee------------ccccceEEEcccc--cccceEEeCCCce---------E
Q psy14896 419 LECVAFG--YPVPSYNWTRRGSPLPRNAYF------------ENFNRILTIPNVK--MRGPYFIKQPTDV---------V 473 (813)
Q Consensus 419 l~C~~~g--~p~p~i~W~~~~~~l~~~~~~------------~~~~~~l~i~~~~--~~g~y~~~~~~~~---------~ 473 (813)
|.|.+.+ .|.+.+.|++++..+...... ......|.|.++. ++|.|+|.+.+.. .
T Consensus 244 L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~ 323 (772)
T 3v2a_R 244 LNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVR 323 (772)
T ss_dssp EEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEE
T ss_pred EEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEE
Confidence 9999998 456689999999886553221 2234568888876 4899999864321 1
Q ss_pred ec-------------ccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCC
Q psy14896 474 FD-------------LSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 540 (813)
Q Consensus 474 ~~-------------~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 540 (813)
+. .....+|+.++|.|.+.|+|.+.+.|+|+|..+.. ...+ ...+.|.|.++ ..+
T Consensus 324 V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~----------~~~~-~~~~~L~i~~v-~~~ 391 (772)
T 3v2a_R 324 VHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLES----------NHTI-KAGHVLTIMEV-SER 391 (772)
T ss_dssp EECCCC--------------------------------------------------------------------------
T ss_pred EeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCC----------CceE-ccceeEEEecC-Chh
Confidence 10 11235689999999999999999999999965421 1111 13478999997 999
Q ss_pred CCceEEEEEEcCceeEE-eecEEEEEeeccccccc---CCCceeccCCCceEEeCCCCCCCccE-EEEccCCCCCc----
Q psy14896 541 DRGSYHCKASNKFGSII-SESVQLAFGFIGEFNLK---RAPEIGNQNWGKAMFCDPPTNYPGVN-YYWARDYFPNF---- 611 (813)
Q Consensus 541 d~G~Y~C~a~n~~g~~~-s~~~~l~v~~~p~~~~~---~~~~~~~~g~~~~l~C~~~~~~p~~~-v~W~k~~~~~~---- 611 (813)
|+|.|+|.|.|..|... +..+.|.|..+|.+... .....+.+|+.++|.|.+ .+.|.+. |+|++++....
T Consensus 392 d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~~v~W~~~~~~~~~~~~ 470 (772)
T 3v2a_R 392 DTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTV-YAIPPPHHIHWYWQLEEECANEP 470 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccccCCCCcEEEEeEe-ccCCCCcEEEEEEcCCccccccc
Confidence 99999999999988643 44567788877765432 111247789999999999 7889887 99999742100
Q ss_pred --------------------------cc-CCCeEEEee-----CccEEEEeecccCCeeEEEEEEeeecCccccCceeeE
Q psy14896 612 --------------------------VE-EDKRVFVSY-----DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 659 (813)
Q Consensus 612 --------------------------~~-~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l 659 (813)
+. ...+..... .++|.|.++ +|+|.|+|.|.|..|.... .+.|
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~~---~~~l 545 (772)
T 3v2a_R 471 SQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGER---VISF 545 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccce---eEEE
Confidence 00 011111111 135888877 7999999999999986543 3667
Q ss_pred EEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCcee--------------------
Q psy14896 660 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF-------------------- 719 (813)
Q Consensus 660 ~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~-------------------- 719 (813)
.|..+|.+... | ...+.+|++++|.|.+.|.|.|.|+|+|+|..+......
T Consensus 546 ~V~~~p~i~~~--p-------~~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (772)
T 3v2a_R 546 HVTRGPEITLQ--P-------DMQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATM 616 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEECCceeecc--C-------CcccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeecccee
Confidence 77776644321 1 134789999999999999999999999998776432211
Q ss_pred --e--ecceEEEECCCCCCCCEEEEEEEEcCCCceE--EEEEEEE--EcCCcccccCCceeecCCCeEEEEEEEcccCCc
Q psy14896 720 --E--NFNRILTIPNVKVEDQGEYICRASNDRSALE--SSVTISI--QAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDV 791 (813)
Q Consensus 720 --~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~--~~~~l~V--~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~ 791 (813)
. .....|+|.+++.+|+|.|+|.|.|..|... ..+.|.| ..+|.|...+.+..+.+|++++|.|.+.|.|+|
T Consensus 617 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p 696 (772)
T 3v2a_R 617 FSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPP 696 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccCCC
Confidence 0 1123599999999999999999999765432 2344444 788999888888889999999999999999999
Q ss_pred eEEEEECCEeccccccccc
Q psy14896 792 TYSWFRNGELGHQMTDLLL 810 (813)
Q Consensus 792 ~v~W~k~g~~l~~~~~~~i 810 (813)
+|+|+|||++|..+.++.+
T Consensus 697 ~v~W~k~g~~l~~~~~~~~ 715 (772)
T 3v2a_R 697 QIMWFKDNETLVEDSGIVL 715 (772)
T ss_dssp -------------------
T ss_pred eEEEEECCeECcCCCCeEE
Confidence 9999999999988766544
No 9
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=3.4e-51 Score=459.10 Aligned_cols=450 Identities=18% Similarity=0.245 Sum_probs=319.5
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
.||.|...+.+..+.+| ++++|.|.+.| .|+|+|+|..+ . .....++|.|.+. +.+
T Consensus 35 ~pP~i~~~~~~~~v~~G-----~~v~l~C~~~~----~v~W~~~~~~~-----------~---~~~~~~~L~I~~~-~~~ 90 (524)
T 2ec8_A 35 SPPSIHPGKSDLIVRVG-----DEIRLLCTDPG----FVKWTFEILDE-----------T---NENKQNEWITEKA-EAT 90 (524)
T ss_dssp CCCEEESCCSEEECCTT-----SCEEEEEECTT----EEEEEEESSSC-----------C---EEECSSEEEESSC-CST
T ss_pred CCCccCCCCceEEEeCC-----CeEEEEEeCCc----eEEEcCCCccc-----------c---ccCccceEEEccc-chh
Confidence 34778777788888777 67999999987 99999999754 1 2344678888885 899
Q ss_pred CCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEee-ccccccccCCccEE
Q psy14896 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWAR-DYFPNFVEEDKRVF 346 (813)
Q Consensus 268 d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k-~~~~~~~~~~~~~~ 346 (813)
|+|.|+|.|.| |. +..+.|.|..++.+........+.+|+.++|.|.+ .+.|.+.++|++ ||.+ +....++.
T Consensus 91 D~G~Y~C~a~n--g~--~~~~~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~-~~~~~~~v~W~~~~g~~--l~~~~~~~ 163 (524)
T 2ec8_A 91 NTGKYTCTNKH--GL--SNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPL-TDPEVTNYSLKGCQGKP--LPKDLRFI 163 (524)
T ss_dssp TCEEEEEEETT--SC--EEEEEEECCCSSCSBCCCCCCCEETTSCEEECCCB-SCCCCSCEEEECSSSCC--CCSSCEEE
T ss_pred hCEEEEEeecC--Cc--ceEEEEEECCCCcccccccceEEEcCCeEEEECcC-CCCccceEEEEccCCcC--cCCCCcee
Confidence 99999999999 53 66788888777666666777888999999999996 465669999988 7776 44566777
Q ss_pred EccCccEEEeeeeecCCe-eeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEee
Q psy14896 347 VSYDGALYFSALEQIDAG-NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425 (813)
Q Consensus 347 ~~~~~~L~i~~v~~~D~G-~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g 425 (813)
...++.|.|.+++.+|+| .|+|.|.|..+.. .+..+.|.|...+. .+|..........+.+|+.+.|.|.+.+
T Consensus 164 ~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~--~s~~~~l~V~~~~~----~~p~i~~~~~~~~v~~G~~v~L~C~~~g 237 (524)
T 2ec8_A 164 PDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSV--LSEKFILKVRPAFK----AVPVVSVSKASYLLREGEEFTVTCTIKD 237 (524)
T ss_dssp EETTTEEEEESCCGGGTTCEEEEEEC----CC--CCCCEECCEECCCC----SCCEEECSCSEEEEETTSCEEEEEEEEE
T ss_pred ECCCccEEEeccchhhCCceEEEEEEECCceE--EEEEEEEEEEeCCC----CCCcEEecCCcceEEcCCcEEEEEEEec
Confidence 778889999999999999 9999999986532 23457777763111 0111111122346889999999999999
Q ss_pred cCCCe-eeEeecCCcC--CCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEe
Q psy14896 426 YPVPS-YNWTRRGSPL--PRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWF 502 (813)
Q Consensus 426 ~p~p~-i~W~~~~~~l--~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~ 502 (813)
.|.|. +.|++++..+ ..... ..+
T Consensus 238 ~p~p~~i~W~~~~~~~~~~~~~~------------------------------------------------------~~~ 263 (524)
T 2ec8_A 238 VSSSVYSTWKRENSQTKLQEKYN------------------------------------------------------SWH 263 (524)
T ss_dssp SSTTCEEEEEETTCSCCCCEEEE------------------------------------------------------EEE
T ss_pred CCCcEEEEEEeCCCCCccccccc------------------------------------------------------ccc
Confidence 88886 9999988774 11100 000
Q ss_pred eccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecccccccC---CCce
Q psy14896 503 KEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR---APEI 579 (813)
Q Consensus 503 k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~---~~~~ 579 (813)
. ........+.|.|.++ ..+|+|.|+|.|.|..|...+ .+.|.|..+|.+...+ ....
T Consensus 264 ~-----------------~~~~~~~~~~L~I~~~-~~~D~G~Y~C~a~n~~g~~~~-~~~l~V~~~p~~~~~~~~~~~~~ 324 (524)
T 2ec8_A 264 H-----------------GDFNYERQATLTISSA-RVNDSGVFMCYANNTFGSANV-TTTLEVVDKGFINIFPMINTTVF 324 (524)
T ss_dssp C-----------------SSSCEEEEEEEEESSC-CTTTCEEEEEEEECSSCEEEE-EEEEEEESSCEEEEEESSCSEEE
T ss_pred c-----------------cCCccceEEEEEECCC-CHHHCEEEEEEEEecCCceEE-EEEEEEeccCceEeecCCCceEE
Confidence 0 0001123468999997 899999999999999998755 6888888887765543 2467
Q ss_pred eccCCCceEEeCCCCCCCccE-EEEccCCCCCcccCCCeEEEeeC-------ccEEEEeecccCCeeEEEEEEeeecCcc
Q psy14896 580 GNQNWGKAMFCDPPTNYPGVN-YYWARDYFPNFVEEDKRVFVSYD-------GALYFSALEQIDAGNYSCNVQSKVSDTG 651 (813)
Q Consensus 580 ~~~g~~~~l~C~~~~~~p~~~-v~W~k~~~~~~~~~~~~~~~~~~-------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 651 (813)
+.+|+.++|.|.+ .|.|.+. |+|+|+|.++..... ++....+ ++|.|.+++.+|+|.|+|.|.|..|...
T Consensus 325 v~~G~~v~l~C~~-~g~P~p~~v~W~k~g~~~~~~~~-~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~ 402 (524)
T 2ec8_A 325 VNDGENVDLIVEY-EAFPKPEHQQWIYMNRTFTDKWE-DYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAA 402 (524)
T ss_dssp ECTTCCEEEEEEE-EEESCCCEEEEESSSCBCSSSBC-CEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred EcCCCcEEEEEEE-eecCCCcEEEEEECCeeccCCcc-ceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEE
Confidence 8899999999999 8999999 999999987433322 3333322 3699999999999999999999998743
Q ss_pred ccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCC--------Cce----e
Q psy14896 652 RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR--------NAY----F 719 (813)
Q Consensus 652 ~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~--------~~~----~ 719 (813)
..+.|.|..+|.+.... .+.+| +|.|.+.|.|.|.|+|+|+|..+.. +.+ .
T Consensus 403 ---~~~~l~V~~~P~i~~~~-----------~~~~g---~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (524)
T 2ec8_A 403 ---IAFNVYVNTKPEILTYD-----------RLVNG---MLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSS 465 (524)
T ss_dssp ---EEEEEEECEEEEEEEEE-----------CCSSS---CEEEEEEEESCCEEECCCC----------CCCCCCCCCCC-
T ss_pred ---EEEEEEEecCCeEeecc-----------cCcCc---EEEEEEEeecCCEEEEEECCCcccccccccCCCCceeeeec
Confidence 34789998888765431 13456 9999999999999999999876621 111 1
Q ss_pred eecceEEE----ECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCcccc
Q psy14896 720 ENFNRILT----IPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 766 (813)
Q Consensus 720 ~~~~~~L~----i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~~~ 766 (813)
....+.|. |.....+|+|.|+|.|.|.+|..+..+.|.|+++|....
T Consensus 466 ~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e~~~~~~ 516 (524)
T 2ec8_A 466 GPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNKEQI 516 (524)
T ss_dssp CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC--------
T ss_pred cCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEecCCHHHc
Confidence 12223333 444456999999999999999999999999998876543
No 10
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=2e-48 Score=443.32 Aligned_cols=465 Identities=17% Similarity=0.189 Sum_probs=332.8
Q ss_pred CCCceeecCCCccccccEEEEeeeccCCCC---eEEEeeccccccc--cc--ccccccCCCccEEee----CC--eEEEc
Q psy14896 195 QPTDVVFDLSKRSILNDITLSCYAGGYPNP---SYEWFKEDYVQDR--LV--ANLIDPLSDKRFTLS----GG--NLIIN 261 (813)
Q Consensus 195 ~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p---~v~W~k~g~~l~~--~~--~~~~~~~~~~~~~~~----~~--~l~i~ 261 (813)
.|.++.+.+| ++++|.|.+.+.|.+ .|.|||++..+.. .. ..........|+.+. ++ +|.|.
T Consensus 6 ~P~~v~v~~G-----~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~ 80 (585)
T 2ocw_A 6 GPEEVNSVEG-----NSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIA 80 (585)
T ss_pred CcceeEEecC-----CcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEEC
Confidence 4567777777 679999999987654 8999999864310 00 000011122344442 33 47777
Q ss_pred CCccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccc--
Q psy14896 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV-- 339 (813)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~-- 339 (813)
+. +.+|+|.|+|.|.|..|.. +..+.|.|..+|.+...+....+.+|+.++|.|.+..+.|.+.+.|+|++.....
T Consensus 81 ~v-~~~D~G~Y~C~~~n~~~~~-~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~ 158 (585)
T 2ocw_A 81 QL-SQDDSGRYKCGLGINSRGL-SFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLV 158 (585)
T ss_pred CC-CcccCEEEEEEcccCCCCc-eEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEE
Confidence 75 8999999999999988876 6779999988888877778888999999999999866667789999999864211
Q ss_pred -c--------CCccEEEccCc------cEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCC
Q psy14896 340 -E--------EDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFP 404 (813)
Q Consensus 340 -~--------~~~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~ 404 (813)
. ...|+.+..++ +|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..+++
T Consensus 159 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~---~~~~~l~V~~~~p----------- 224 (585)
T 2ocw_A 159 IDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSN---KKNADLQVLKPEP----------- 224 (585)
T ss_pred ecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccc---cceEEEEEccCCC-----------
Confidence 1 13455554444 69999999999999999999887753 3447888865421
Q ss_pred CCCCcCCCCCCcEEEEEEEeecCC---CeeeEe-ecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccc
Q psy14896 405 KTFPEAPKAGDKVRLECVAFGYPV---PSYNWT-RRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRS 480 (813)
Q Consensus 405 ~~~~~~v~~g~~~~l~C~~~g~p~---p~i~W~-~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~ 480 (813)
....+.+|+.+.|.|.+ +.|. +.+.|+ +++..+..-.
T Consensus 225 --~~~~~~~G~~v~l~C~~-~~~~~~~~~~~w~~~~g~~~~~~~------------------------------------ 265 (585)
T 2ocw_A 225 --ELVYEDLRGSVTFHCAL-GPEVANVAKFLCRQSSGENCDVVV------------------------------------ 265 (585)
T ss_pred --ceeEEcCCCcEEEEEEc-CCCCCCceEEEEEeCCCCCcceEE------------------------------------
Confidence 11357799999999997 4444 578886 7764332100
Q ss_pred cccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEee----CC--eEEEeCCCCCCCCceEEEEEEcCce
Q psy14896 481 ILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS----GG--NLIINDPRQVEDRGSYHCKASNKFG 554 (813)
Q Consensus 481 ~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~----~~--~l~i~~~~~~~d~G~Y~C~a~n~~g 554 (813)
..++. .......++.+. ++ +|.|.++ ..+|+|.|+|.|.|. |
T Consensus 266 ---------------------~~~~~---------~~~~~~~~~~~~~~~~~g~~~L~i~~v-~~~d~G~Y~C~a~n~-g 313 (585)
T 2ocw_A 266 ---------------------NTLGK---------RAPAFEGRILLNPQDKDGSFSVVITGL-RKEDAGRYLCGAHSD-G 313 (585)
T ss_pred ---------------------eCCCc---------CCcccCCceEeeccCCCcEEEEEEccC-ChhhCEEEEEEEEcC-C
Confidence 00000 000011222221 33 7999997 999999999999995 4
Q ss_pred eEE----eecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCCccEE----EEcc--CCC--CCcc-------cCC
Q psy14896 555 SII----SESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNY----YWAR--DYF--PNFV-------EED 615 (813)
Q Consensus 555 ~~~----s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v----~W~k--~~~--~~~~-------~~~ 615 (813)
... ...+.|.|..+|.+...+....+.+|+.++|.|.+ .+.|.+.+ +|+| +|. .+.. ...
T Consensus 314 ~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~-~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~ 392 (585)
T 2ocw_A 314 QLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPY-NRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYE 392 (585)
T ss_pred CccccCceeeEEEEEecccccccCCcceEEEeCCcEEEEEec-CCCCCccEEEEEEEEccCCCCCceeeeecceeecccC
Confidence 432 15678888888887776667778899999999999 78898877 8999 876 3211 123
Q ss_pred CeEEEe---eCcc--EEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeE
Q psy14896 616 KRVFVS---YDGA--LYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV 690 (813)
Q Consensus 616 ~~~~~~---~~~~--L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v 690 (813)
.++.+. .+|+ |.|.+++.+|+|.|+|.| |..|.. ...+.|.|...|..... +....+.+|+++
T Consensus 393 ~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~---~~~~~l~V~~~~p~~~~--------~~~~~v~~G~~v 460 (585)
T 2ocw_A 393 GRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLW---RTTVEIKIIEGEPNLKV--------PGNVTAVLGETL 460 (585)
T ss_pred CCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCcc---ceeEEEEEecCcccccc--------CCceeEecCCcE
Confidence 455554 3455 999999999999999999 887654 33477888765433221 223678999999
Q ss_pred EEEEEec----CCCCCeEEEEeCCcccCCCce-------ee----ecceEEEECCCCCCCCEEEEEEEEcCCCceEE-EE
Q psy14896 691 RLECVAF----GYPVPSYNWTRRGSPLPRNAY-------FE----NFNRILTIPNVKVEDQGEYICRASNDRSALES-SV 754 (813)
Q Consensus 691 ~l~C~~~----g~P~p~i~W~k~g~~l~~~~~-------~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~-~~ 754 (813)
+|.|.+. |.|.|.|+|+|+|..+..... .. .....|+|.+++.+|+|.|+|.|.|..|...+ .+
T Consensus 461 ~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 540 (585)
T 2ocw_A 461 KVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAV 540 (585)
T ss_pred EEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEE
Confidence 9999997 778899999999988754321 11 12368999999999999999999999997664 49
Q ss_pred EEEEEcCCcc
Q psy14896 755 TISIQAEPNF 764 (813)
Q Consensus 755 ~l~V~~~P~~ 764 (813)
.|.|..+|..
T Consensus 541 ~l~V~~~p~~ 550 (585)
T 2ocw_A 541 YVAVEERKAA 550 (585)
T ss_pred EEEEEeeeec
Confidence 9999998853
No 11
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-49 Score=437.08 Aligned_cols=438 Identities=14% Similarity=0.157 Sum_probs=282.4
Q ss_pred CceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccCCeeEEEEe
Q psy14896 197 TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKA 276 (813)
Q Consensus 197 ~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a 276 (813)
..+.|.+| ++++|.|.+.+.|...+.|++++..+.... .+ ..+.+.. -+|.|.+. +.+|+|.|+|.|
T Consensus 56 ~~~~v~~g-----~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~--~~--~~~~r~~---~SL~I~~v-~~~D~G~Y~C~~ 122 (527)
T 3qs9_E 56 AAVEVDVS-----ASITLQVLVDAPGNISCLWVFKHSSLNCQP--HF--DLQNRGV---VSMVILKM-TETQAGEYLLFI 122 (527)
T ss_dssp CEEEECSS-----CCEEEEEECSCCSSCEEEEEETTEEECCCC--BC-------CE---EEEEESSC-CSSSCSEEEEEE
T ss_pred eeEEEecc-----ccEEEEEEEecCCceeEEEEecCCccCccc--cc--CCCcceE---EEEEECcC-ChhhCeeEEEEE
Confidence 35777676 779999999998889999999997653211 11 1111111 14788875 899999999999
Q ss_pred ecCceeeEeeeeEEeeeeecccccC-CCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEccCc--cE
Q psy14896 277 SNKFGSIISESVQLAFGFIGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG--AL 353 (813)
Q Consensus 277 ~n~~g~~~s~~~~l~v~~~~~~~~~-~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~--~L 353 (813)
.|..|.. +..+.|.|. +.+... ..+.....+...+|.|.+ .|+|.|.|+|++++.++.. ......+ ..
T Consensus 123 ~n~~~~~-~~~~~v~v~--~~~~~~~~~p~~~~~~~~~~L~C~a-~G~P~P~i~W~~~~~~~~~-----~~~~~~~~~~~ 193 (527)
T 3qs9_E 123 QSEATNY-TILFTVSIR--NTLLYTLRRPYFRKMENQDALVCIS-ESVPEPIVEWVLCDSQGES-----CKEESPAVVKK 193 (527)
T ss_dssp EC--CEE-EEEEEEEEC-------CEEEEEEEECSSSSCEEEEE-EESSCCEEEEEEC------------------CEEE
T ss_pred EeccccE-EEEEEEEEC--CceeeccCCCcEEecCCceEEEEEE-ceecCCeEEEEECCCCCcc-----ccccCCcEEEE
Confidence 9998865 334444443 332222 233344567777999995 7899999999998875321 0111111 12
Q ss_pred EEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEe-ecCCCeee
Q psy14896 354 YFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF-GYPVPSYN 432 (813)
Q Consensus 354 ~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~-g~p~p~i~ 432 (813)
....+..+|+|.|+|.|.|..|.... ..+.|.|...|.+ +.....+.+|+.+.|.|.+. |.|.|.|+
T Consensus 194 ~~~~~~~~d~G~Y~C~A~N~~G~~~~--~~~~l~V~~~p~~----------~p~~~~v~~G~~v~L~C~~~~g~p~p~i~ 261 (527)
T 3qs9_E 194 EEKVLHELFGTDIRCCARNELGRECT--RLFTIDLNQTPQT----------TLPQLFLKVGEPLWIRCKAVHVNHGFGLT 261 (527)
T ss_dssp CCSEECCCCSSCEEEEEECSSCEEEE--ECEEEESSSCCCC----------SCCEEEECTTSCEEEEEEEEESSSCCCEE
T ss_pred eeeeccccCCEEEEEEEEeCCCcccc--eEEEEEEeccCcc----------CCCceEEeCCCeEEEEEEEccCCCCeEEE
Confidence 23345689999999999999886433 2467777655432 11245788999999999996 88999999
Q ss_pred EeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeecccccccee
Q psy14896 433 WTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLV 512 (813)
Q Consensus 433 W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~ 512 (813)
|++++..+.....+.. .-+.
T Consensus 262 W~k~g~~l~~~~~~~~---------------------------------------------------~~~~--------- 281 (527)
T 3qs9_E 262 WELENKALEEGNYFEM---------------------------------------------------STYS--------- 281 (527)
T ss_dssp EECSSSCCCGGGEEEE---------------------------------------------------EEEE---------
T ss_pred EEECCEECCCCceeee---------------------------------------------------eeec---------
Confidence 9999887754321110 0000
Q ss_pred ccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecccccccC--CCceeccCCCceEEe
Q psy14896 513 ANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR--APEIGNQNWGKAMFC 590 (813)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~C 590 (813)
..+.....++|.|.++ ..+|+|.|+|.|.|. .+..+.|.|..+|.+.... ....+.+|+.+.|.|
T Consensus 282 --------~~~~~~~~~~L~I~~v-~~~DsG~Y~C~a~N~----~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C 348 (527)
T 3qs9_E 282 --------TNRTMIRILFAFVSSV-ARNDTGYYTCSSSKH----PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSV 348 (527)
T ss_dssp --------TTTEEEEEEEEEESSC-CGGGCEEEEEEETTE----EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEE
T ss_pred --------cCcceeeEEEEEEccC-CcccCeEEEEEEEeC----CCceEEEEEEccCccccccCcccEEEcCCCeEEEEE
Confidence 1112234457999997 999999999999998 3455788887777554432 234567899999999
Q ss_pred CCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCcccc
Q psy14896 591 DPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL 670 (813)
Q Consensus 591 ~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~ 670 (813)
.+ .|+|.|.|+|+|+|.++. ...+. ...+++|.|.++..+|+|.|+|.|.|..|.... .+.|.|..+|.+...
T Consensus 349 ~~-~g~P~p~i~W~k~g~~l~--~~~~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~---~~~L~V~~~P~i~~~ 421 (527)
T 3qs9_E 349 RF-KAYPQIRCTWTFSRKSFP--CEQKG-LDNGYSISKFCNHKHQPGEYIFHAENDDAQFTK---MFTLNIRRKPQVLAE 421 (527)
T ss_dssp EE-EEESCCEEEEEETTEEEE--CBCCB-CSSSSEEEEECCCTTCCSCEEEEEEETTEEEEE---EEEEC--CCCEEEEC
T ss_pred EE-EecCCCEEEEEECCEECc--CCccc-ccCCcEEEEecCCcccCEEEEEEEEeCCCcEEE---EEEEEEecCCeEEEe
Confidence 99 899999999999997642 22221 224567999999999999999999999986544 478889888865431
Q ss_pred ccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCc---------------eeeecceEEEECCCCCCC
Q psy14896 671 KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA---------------YFENFNRILTIPNVKVED 735 (813)
Q Consensus 671 ~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~---------------~~~~~~~~L~i~~v~~~d 735 (813)
..| .+|.|.+.|.|.|.|+|++++..+.... ........++|.-...+|
T Consensus 422 --------------~~~--~~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d 485 (527)
T 3qs9_E 422 --------------ASA--SQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIK 485 (527)
T ss_dssp --------------CCC--E---EEEECSSCCEEEEECCC-----CCCCCCCCEEEC---------CEEEEECCCCCSSC
T ss_pred --------------CCC--CEEEEEEEEEcCCeEEEEECCCCcCCCccccccccceeccccccCCceEEEEEEEEEEcCC
Confidence 012 3589999999999999999876542110 001111223333334569
Q ss_pred CEEEEEEEEcCCCceEEEEEEEEEcCCcc
Q psy14896 736 QGEYICRASNDRSALESSVTISIQAEPNF 764 (813)
Q Consensus 736 ~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~ 764 (813)
+|.|+|.|.|.+|..+..+.|.|.++-.+
T Consensus 486 ~G~Y~C~A~N~~G~~~~~~~L~V~~p~~~ 514 (527)
T 3qs9_E 486 GFLVKCCAYNSLGTSCETILLNSPGPFPF 514 (527)
T ss_dssp SCEEEEEEECSSCEEEEEEEC--------
T ss_pred CEEEEEEEEeCCCCceeEEEEecCCCcee
Confidence 99999999999999999999998776444
No 12
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=9.2e-49 Score=430.76 Aligned_cols=429 Identities=14% Similarity=0.158 Sum_probs=295.2
Q ss_pred eeeCCCceeecCCCccccccEEEEeeeccCCCCeE-----EEeecccccccccccccccCCCccEEeeCCeEEEcCCccc
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSY-----EWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v-----~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 266 (813)
|...|.+..+.+| ++++|.|.+.| |.|.+ .|+|++..+. +.++ ++|.|.+. +.
T Consensus 2 i~~~P~~~~v~~G-----~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~-----------~~~~----~~l~i~~v-~~ 59 (450)
T 1z7z_I 2 TSVSPSKVILPRG-----GSVLVTCSTSC-DQPMLLGIETPLPKKELLLP-----------GNNR----KVYELSNV-QE 59 (450)
T ss_dssp CEEESSEEEEETT-----EEEEEEEECCS-SCCCEEEECSSSCEEECCSS-----------TTTE----EEEEEEEE-CS
T ss_pred cccCCCceEEecC-----CcEEEEEEccC-CCcccccccceeeecceEec-----------CCCc----eEEEEEec-cc
Confidence 4566788888777 77999999999 99999 9999986431 1122 26777764 55
Q ss_pred cCCeeEEEEeecCceeeEeeeeEEeeeeecccc-cCCCCceeecCCCeEEEecCCCCCCcc---eEEEeeccccccccCC
Q psy14896 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFN-LKRAPEIGNQNWGKAMFCDPPTNYPGV---NYYWARDYFPNFVEED 342 (813)
Q Consensus 267 ~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~-~~~~~~~~~~~~~~~l~C~~~~~~p~~---~v~W~k~~~~~~~~~~ 342 (813)
|+| |+|.|.|..+.. +..+.|.|..+|.+. ..+.+..+.+|+.++|.|.+ .+.|++ .|+|+|||.++....
T Consensus 60 -d~g-Y~C~a~~~~~~~-~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~-~g~~~~~~~~v~W~k~g~~l~~~~- 134 (450)
T 1z7z_I 60 -DSQ-PMCYSNCPDGQS-TAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQV-EGGAPRANLTVVLLRGEKELKREP- 134 (450)
T ss_dssp -CBC-CEEEEEETTEEE-EEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEE-ECCBCGGGEEEEEEETTEEEEEEE-
T ss_pred -CCe-eEEEEeCCCCcc-eeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEe-cCCCCCcCcEEEEeeCCEEeeccc-
Confidence 999 999998765554 778888888777655 45566788999999999996 455665 999999998753222
Q ss_pred ccEEEccCccEEEeeeeecCCeeeEEEEeeeccccCCC-----CCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcE
Q psy14896 343 KRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRN-----GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV 417 (813)
Q Consensus 343 ~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~-----s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~ 417 (813)
......+++|.|.++..+|+|.|+|.|.|..|..... +....|.|...+. ..|.. ..+..+.+|+.+
T Consensus 135 -~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~----~~p~~---~~~~~v~~G~~v 206 (450)
T 1z7z_I 135 -AVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPA----TPPQL---VSPRVLEVDTQG 206 (450)
T ss_dssp -CCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCS----SCCEE---ECCSEEETTSEE
T ss_pred -ccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCC----CCCEe---cCceeEEeCCcE
Confidence 1112224589999999999999999999998754321 1234444443211 01111 111457778888
Q ss_pred EEEEEEeec-C--CCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeecc
Q psy14896 418 RLECVAFGY-P--VPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGY 494 (813)
Q Consensus 418 ~l~C~~~g~-p--~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~ 494 (813)
.|.|.+.|. | .+.+.|++++..+..
T Consensus 207 ~l~C~~~g~~P~~~~~~~W~~~~~~~~~---------------------------------------------------- 234 (450)
T 1z7z_I 207 TVVCSLDGLFPVSEAQVHLALGDQRLNP---------------------------------------------------- 234 (450)
T ss_dssp EEEEEEESCTTGGGCEEEEEETTEECCC----------------------------------------------------
T ss_pred EEEEEeeCCCCCCceEEEEeCCCEeCCc----------------------------------------------------
Confidence 888888777 6 567777777766532
Q ss_pred CCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCc--eEEEEEEcCceeEEeecEEEEEeeccccc
Q psy14896 495 PNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRG--SYHCKASNKFGSIISESVQLAFGFIGEFN 572 (813)
Q Consensus 495 p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G--~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~ 572 (813)
.+.|..++. ...+.+ ++ ..+|+| .|+|.|.|..|.... .+.|.|...+.+.
T Consensus 235 ---~~~~~~~~~---------------------~~~~~~-~v-~~~d~G~~~Y~C~a~n~~g~~~~-~~~l~V~~~~~p~ 287 (450)
T 1z7z_I 235 ---TVTYGNDSF---------------------SAKASV-SV-TAEDEGTQRLTCAVILGNQSQET-LQTVTIYSFPAPN 287 (450)
T ss_dssp ---EEEEETTEE---------------------EEEEEE-EC-CGGGCEEEEEEEEEEETTEEEEE-EEEEEEECCCCCE
T ss_pred ---eEEecCCce---------------------eEEEEE-Ee-EhhhCCcEEEEEEEccCCccEEE-EEEEEEecCCCCe
Confidence 112211110 001222 44 789999 999999999888644 4677777644444
Q ss_pred ccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecC-cc
Q psy14896 573 LKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSD-TG 651 (813)
Q Consensus 573 ~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~ 651 (813)
+...+..+.+|+.++|.|.+ . |.+.++| +|.++.. .....+|.|.++..+|+|.|+|.|.|..+. ..
T Consensus 288 i~~~~~~v~~G~~v~l~C~~-~--p~p~i~W--~g~~~~~-------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~ 355 (450)
T 1z7z_I 288 VILTKPEVSEGTEVTVKCEA-H--PRAKVTL--NGVPAQP-------LGPRAQLLLKATPEDNGRSFSCSATLEVAGQLI 355 (450)
T ss_dssp EEESCSEEETTCEEEEEEEC----------------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEE
T ss_pred EecCCeeEeCCCcEEEEEec-C--CCCEeEE--CCEEcCC-------CCceEEEEEecCcccCCceEEEEEEcCCCCccc
Confidence 44445678899999999998 3 8899999 7765311 112347999999999999999999987753 22
Q ss_pred ccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeeecceEEEECCC
Q psy14896 652 RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNV 731 (813)
Q Consensus 652 ~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v 731 (813)
.....+.|.|.++|.+..... +....+.+|++++|.|.+.|+|.|.|+|+|+|..+..+ +..| ++
T Consensus 356 ~~~~~~~l~V~~~P~~~~~~~------p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~------g~~~---~v 420 (450)
T 1z7z_I 356 HKNQTRELRVLYGPRLDERDC------PGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPI------GESV---TV 420 (450)
T ss_dssp EEEEEEECEEEEEEECCSTTS------CSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCT------TSCE---EC
T ss_pred ccceeEEEEEecCCceeeccC------CCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCCC------CCeE---eE
Confidence 233457888888886654311 12356789999999999999999999999999854332 2233 57
Q ss_pred CCCCCEEEEEEEEcCCCceEEEEEEEEEcC
Q psy14896 732 KVEDQGEYICRASNDRSALESSVTISIQAE 761 (813)
Q Consensus 732 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 761 (813)
+.+|+|.|+|.|.|.+|..+.++.|.|+.|
T Consensus 421 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 450 (450)
T 1z7z_I 421 TRDLEGTYLCRARSTQGEVTREVTVNVLSP 450 (450)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred ehhhCeEEEEEEEeCCCceeEEEEEEEEcC
Confidence 889999999999999999999999999864
No 13
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=4.4e-48 Score=414.83 Aligned_cols=377 Identities=28% Similarity=0.511 Sum_probs=274.8
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
.+|.|+.+|.+..+..+ .+|+++.|.|.+.|+|.|+|+|+|||.++. ...+.++...+|+|+|.+.++.+
T Consensus 4 ~~P~f~~~P~~~~~~~~--~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~--------~~~~~~~~~~~g~l~i~~~~~~~ 73 (384)
T 3kld_A 4 SGPVFVQEPSHVMFPLD--SEEKKVKLSCEVKGNPKPHIRWKLNGTDVD--------IGMDFRYSVVDGSLLINNPNKTQ 73 (384)
T ss_dssp EEEEEEECCCCEEEETT--CSCSEEEECCEEEEESCCEEEEEETTEECC--------C----CEEEETTEEEEESCCHHH
T ss_pred CCCEEEeCCcceEeecC--CCCCeEEEEeEecCCCCCEEEEEECCEECc--------CCCCccEEEECCEEEEcCCCCcc
Confidence 36899999999988655 357899999999999999999999998763 23455677789999999876789
Q ss_pred CCeeEEEEeecCceeeEeeeeEEeeeeecccccCC-CCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEE
Q psy14896 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVF 346 (813)
Q Consensus 268 d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~-~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~ 346 (813)
|+|.|+|.|.|..|...+..+.|.+.+.+.+.... ....+.+|+.+.|.|.+..+.|.+.+.|++++.++. ....++.
T Consensus 74 D~G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~-~~~~~~~ 152 (384)
T 3kld_A 74 DAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY-QDNRRFV 152 (384)
T ss_dssp HCEEEEEEEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECC-CSSSEEE
T ss_pred cCEEEEEEEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCE-eeccEEE
Confidence 99999999999999987888999998887766543 446788999999999876677889999999998753 3334444
Q ss_pred EccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeec
Q psy14896 347 VSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY 426 (813)
Q Consensus 347 ~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~ 426 (813)
...++.|.|.++..+|+|.|+|.|.|..+.....+....+.+..........+...........+.+|+.+.|.|.+.|+
T Consensus 153 ~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~ 232 (384)
T 3kld_A 153 SQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGN 232 (384)
T ss_dssp CTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEE
T ss_pred EcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeec
Confidence 55677999999999999999999999876543222223333321100000000000000011234455555555555555
Q ss_pred CCCeeeEeecCC-cCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeecc
Q psy14896 427 PVPSYNWTRRGS-PLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED 505 (813)
Q Consensus 427 p~p~i~W~~~~~-~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~ 505 (813)
|.|.+.|++++. ++..
T Consensus 233 P~p~i~W~k~~~~~~~~--------------------------------------------------------------- 249 (384)
T 3kld_A 233 PVPTILWRRADGKPIAR--------------------------------------------------------------- 249 (384)
T ss_dssp SCCEEEEEETTCCCCCT---------------------------------------------------------------
T ss_pred CCCcEEEEeCCCccccc---------------------------------------------------------------
Confidence 555555555322 2211
Q ss_pred ccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecccccccCCCceeccCCC
Q psy14896 506 YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWG 585 (813)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~ 585 (813)
..+....++.|.|.++ ..+|+|.|+|.|.|..|.... ...|.|..+|.+........+..|+.
T Consensus 250 ---------------~~~~~~~~~~L~I~~v-~~~D~G~Y~C~a~N~~G~~~~-~~~l~v~~~P~~~~~~~~~~v~~g~~ 312 (384)
T 3kld_A 250 ---------------KARRHKSNGILEIPNF-QQEDAGSYECVAENSRGKNVA-KGQLTFYAQPNWVQIINDIHVAMEES 312 (384)
T ss_dssp ---------------TCEECTTSCEEEECSC-CGGGCEEEEEEEEETTEEEEE-EEEEEEEEEEEEEECCCCEEECTTCC
T ss_pred ---------------cceecCCCcEEEECCC-ChhhCEEEEEEEEcCCCeEEE-EEEEEEecCCccccCCCceEecCCCC
Confidence 1112223568999997 999999999999999998744 47888888888877777788899999
Q ss_pred ceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEc
Q psy14896 586 KAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 662 (813)
Q Consensus 586 ~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~ 662 (813)
+.|.|.+ .|.|.|.|+|+|+|.++ ....++.+ .+++|.|.++..+|+|.|+|.|.|..|....+ +.|.|.
T Consensus 313 v~l~C~~-~g~P~p~i~W~k~g~~l--~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~---a~L~V~ 382 (384)
T 3kld_A 313 VFWECKA-NGRPKPTYRWLKNGDPL--LTRDRIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIFSS---AELSVI 382 (384)
T ss_dssp EEEECEE-EEESCCEEEEEETTEEC--CCBTTEEE-ETTEEEESSCCGGGCEEEEEEEEETTEEEEEE---EEEEEC
T ss_pred EEEEeEC-CccCCCeEEEEECCEEC--CCCccEEE-eCCEEEEeecChhhCEEEEEEEEeCCceEEec---eEEEEe
Confidence 9999999 79999999999999864 33445554 56799999999999999999999999876543 566664
No 14
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=3e-47 Score=427.11 Aligned_cols=406 Identities=15% Similarity=0.216 Sum_probs=297.6
Q ss_pred eecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEccCccEEE
Q psy14896 276 ASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYF 355 (813)
Q Consensus 276 a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i 355 (813)
+.+..|.. ...+.|.|..+|.+........+.+|+.++|.|.+. + .+.|+|++.++ . .....++|.|
T Consensus 18 ~~~~~g~~-~~~i~l~v~~pP~i~~~~~~~~v~~G~~v~l~C~~~-~----~v~W~~~~~~~------~-~~~~~~~L~I 84 (524)
T 2ec8_A 18 LRVQTGSS-QPSVSPGEPSPPSIHPGKSDLIVRVGDEIRLLCTDP-G----FVKWTFEILDE------T-NENKQNEWIT 84 (524)
T ss_dssp C---------------CCCCCEEESCCSEEECCTTSCEEEEEECT-T----EEEEEEESSSC------C-EEECSSEEEE
T ss_pred hhhhcCCC-CCeEEcCCCCCCccCCCCceEEEeCCCeEEEEEeCC-c----eEEEcCCCccc------c-ccCccceEEE
Confidence 34445543 456778888888777666677889999999999964 3 99999999875 1 3345678999
Q ss_pred eeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeecCCCeeeEee
Q psy14896 356 SALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR 435 (813)
Q Consensus 356 ~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~ 435 (813)
.+++.+|+|.|+|.|.| |. +..+.|.|..++... .......+.+|+.+.|.|.+.+.|.+.|.|++
T Consensus 85 ~~~~~~D~G~Y~C~a~n--g~----~~~~~l~V~~p~~~~--------~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~ 150 (524)
T 2ec8_A 85 EKAEATNTGKYTCTNKH--GL----SNSIYVFVRDPAKLF--------LVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKG 150 (524)
T ss_dssp SSCCSTTCEEEEEEETT--SC----EEEEEEECCCSSCSB--------CCCCCCCEETTSCEEECCCBSCCCCSCEEEEC
T ss_pred cccchhhCEEEEEeecC--Cc----ceEEEEEECCCCccc--------ccccceEEEcCCeEEEECcCCCCccceEEEEc
Confidence 99999999999999998 32 344677776544322 11223567889999999988876667888877
Q ss_pred -cCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceecc
Q psy14896 436 -RGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 514 (813)
Q Consensus 436 -~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~ 514 (813)
++..+...
T Consensus 151 ~~g~~l~~~----------------------------------------------------------------------- 159 (524)
T 2ec8_A 151 CQGKPLPKD----------------------------------------------------------------------- 159 (524)
T ss_dssp SSSCCCCSS-----------------------------------------------------------------------
T ss_pred cCCcCcCCC-----------------------------------------------------------------------
Confidence 55555322
Q ss_pred ccCCCCCceEEe-eCCeEEEeCCCCCCCCc-eEEEEEEcCceeEEeecEEEEEe----ecccccccCCCceeccCCCceE
Q psy14896 515 LIDPLSDKRFTL-SGGNLIINDPRQVEDRG-SYHCKASNKFGSIISESVQLAFG----FIGEFNLKRAPEIGNQNWGKAM 588 (813)
Q Consensus 515 ~~~~~~~~~~~~-~~~~l~i~~~~~~~d~G-~Y~C~a~n~~g~~~s~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l 588 (813)
.++.. .++.|.|.++ ..+|+| .|+|.|.|..|...+..+.|.|. .+|.+........+.+|+.++|
T Consensus 160 -------~~~~~~~~~~L~i~~~-~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L 231 (524)
T 2ec8_A 160 -------LRFIPDPKAGIMIKSV-KRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTV 231 (524)
T ss_dssp -------CEEEEETTTEEEEESC-CGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEE
T ss_pred -------CceeECCCccEEEecc-chhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEE
Confidence 11211 2457999997 999999 99999999877765656788876 5666666666667889999999
Q ss_pred EeCCCCCCCccE-EEEccCCCCCcccCCCeEE------EeeCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEE
Q psy14896 589 FCDPPTNYPGVN-YYWARDYFPNFVEEDKRVF------VSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 661 (813)
Q Consensus 589 ~C~~~~~~p~~~-v~W~k~~~~~~~~~~~~~~------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v 661 (813)
.|.+ .+.|.+. |+|+|++..+.+....+.. ...+++|.|.++..+|+|.|+|.|.|..|.... .+.|.|
T Consensus 232 ~C~~-~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~---~~~l~V 307 (524)
T 2ec8_A 232 TCTI-KDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANV---TTTLEV 307 (524)
T ss_dssp EEEE-EESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEE---EEEEEE
T ss_pred EEEE-ecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEE---EEEEEE
Confidence 9999 5878776 9999999763222222222 233467999999999999999999998876543 578899
Q ss_pred ccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCe-EEEEeCCcccCCCc-eee-e-------cceEEEECCC
Q psy14896 662 FPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS-YNWTRRGSPLPRNA-YFE-N-------FNRILTIPNV 731 (813)
Q Consensus 662 ~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~-i~W~k~g~~l~~~~-~~~-~-------~~~~L~i~~v 731 (813)
..+|.+..... ......+.+|+.++|.|.+.|.|.|. |+|+|+|.++.... ++. . ...+|.|.++
T Consensus 308 ~~~p~~~~~~~-----~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 382 (524)
T 2ec8_A 308 VDKGFINIFPM-----INTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRL 382 (524)
T ss_dssp ESSCEEEEEES-----SCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSC
T ss_pred eccCceEeecC-----CCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeec
Confidence 88876544211 12236789999999999999999999 99999999987664 221 1 2468999999
Q ss_pred CCCCCEEEEEEEEcCCCceEEEEEEEEEcCCcccccCCceeecCCCeEEEEEEEcccCCceEEEEECCEec
Q psy14896 732 KVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELG 802 (813)
Q Consensus 732 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~g~~l 802 (813)
+.+|+|.|+|.|.|..|..+.++.|.|..+|.|...+. +.+| +|.|.+.|.|+|+|+|+|||..+
T Consensus 383 ~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~i~~~~~---~~~g---~l~C~~~g~P~p~i~W~~~~~~~ 447 (524)
T 2ec8_A 383 KGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEILTYDR---LVNG---MLQCVAAGFPEPTIDWYFCPGTE 447 (524)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEEEC---CSSS---CEEEEEEEESCCEEECCCC----
T ss_pred CcccCeEEEEEEEecCceEEEEEEEEEecCCeEeeccc---CcCc---EEEEEEEeecCCEEEEEECCCcc
Confidence 99999999999999999999999999999999876554 3456 99999999999999999998776
No 15
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=1.2e-45 Score=413.87 Aligned_cols=455 Identities=17% Similarity=0.237 Sum_probs=285.9
Q ss_pred eCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecc--cccccccc--cccccCCCccEEee----CCeEEEcCCcc
Q psy14896 194 KQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED--YVQDRLVA--NLIDPLSDKRFTLS----GGNLIINDPRQ 265 (813)
Q Consensus 194 ~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g--~~l~~~~~--~~~~~~~~~~~~~~----~~~l~i~~~~~ 265 (813)
.+|..+.+.+| ++++|.|.+.+.|.+.|.|||++ ..+..... .........|+... ..+|.|.+. +
T Consensus 5 ~~p~~~~v~~G-----~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v-~ 78 (523)
T 2rcj_C 5 TQPPSASGTPG-----QRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGL-E 78 (523)
T ss_pred ccCCceEEecC-----CcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCC-C
Confidence 34666777777 77999999999999999999985 22210000 00011123455432 236888885 8
Q ss_pred ccCCeeEEEEeecCceee--EeeeeEEeee----eecccccCCCCceeecCCCeEEEecCCCCCCc-ceEEEeecccccc
Q psy14896 266 VEDRGSYHCKASNKFGSI--ISESVQLAFG----FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNF 338 (813)
Q Consensus 266 ~~d~G~Y~C~a~n~~g~~--~s~~~~l~v~----~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~v~W~k~~~~~~ 338 (813)
.+|+|.|+|.|.|..|.. .+..+.|.|. .+|.+.+........+|+.++|.|.+.+..|+ ++++|+|||+++.
T Consensus 79 ~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 158 (523)
T 2rcj_C 79 AEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVK 158 (523)
T ss_pred hhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCC
Confidence 999999999999987642 2345677773 33444444455556678889999997544343 4999999998753
Q ss_pred ccCCccEE---EccCc------cEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCc
Q psy14896 339 VEEDKRVF---VSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409 (813)
Q Consensus 339 ~~~~~~~~---~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~ 409 (813)
.. .+.. ...++ .|.|.++..+|+|.|+|.|.|..+..... +.+.+.... ...|.........
T Consensus 159 ~~--~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~---~~~~~~~~~----~~~P~v~~~~~~~ 229 (523)
T 2rcj_C 159 AG--VETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT---VAPTECSAS----TKGPSVFPLAPSS 229 (523)
T ss_pred Cc--eEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccc---eeeeecCCC----CcCCEEEecCCCc
Confidence 22 1111 11222 59999999999999999999987643222 222211100 0111111111123
Q ss_pred CCCCCCcEEEEEEEeec-CCC-eeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEE
Q psy14896 410 APKAGDKVRLECVAFGY-PVP-SYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITL 487 (813)
Q Consensus 410 ~v~~g~~~~l~C~~~g~-p~p-~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l 487 (813)
.+.+|+.+.|.|.+.|. |.| .|+|++++..+.....
T Consensus 230 ~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~------------------------------------------ 267 (523)
T 2rcj_C 230 KSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTF------------------------------------------ 267 (523)
T ss_pred ccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeC------------------------------------------
Confidence 46788888888888775 767 7888887766421100
Q ss_pred EEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEee
Q psy14896 488 SCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 567 (813)
Q Consensus 488 ~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~ 567 (813)
+.+ . .....+ ...+.|.|.++ ..+| |.|+|.|.|..|... ..+.|.+..
T Consensus 268 ---------~~~-----------------~-~~~g~~-~~~s~L~i~~~-~~~d-G~Y~C~a~n~~g~~~-~~~~l~v~~ 316 (523)
T 2rcj_C 268 ---------PAV-----------------L-QSSGLY-SLSSVVTVPSS-SLGT-QTYICNVNHKPSNTK-VDKRVEPLS 316 (523)
T ss_pred ---------CcE-----------------e-cCCCcE-EEEEEEEechh-hcCC-ceEEEEEEeCCCCcc-eEEecCCCc
Confidence 000 0 001111 12357889886 8889 999999999998753 234555544
Q ss_pred cccccc-cCCCce-eccCCCceEEeCCCCCCCc----cEEEEccCCCCCcccCCCeEEEeeCc------cEEEEeecccC
Q psy14896 568 IGEFNL-KRAPEI-GNQNWGKAMFCDPPTNYPG----VNYYWARDYFPNFVEEDKRVFVSYDG------ALYFSALEQID 635 (813)
Q Consensus 568 ~p~~~~-~~~~~~-~~~g~~~~l~C~~~~~~p~----~~v~W~k~~~~~~~~~~~~~~~~~~~------~L~i~~~~~~d 635 (813)
.|.+.+ .+.... +.+|+.++|.|.+ .|.|+ +.|+|+|+|.++............+| .|.|.++..+|
T Consensus 317 ~P~~~~~~p~~~~~v~~g~~~~l~C~~-~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d 395 (523)
T 2rcj_C 317 LPSVFLFPPKPKDTLMISRTPEVTCVV-VDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLD 395 (523)
T ss_pred CceEEecCCCchhhcccCCceEEEEEE-ecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcC
Confidence 454322 222233 6789999999999 55432 69999999987533322222222333 48888899999
Q ss_pred CeeEEEEEEeeecCccccCceeeEE----EccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCC--eEEEEeC
Q psy14896 636 AGNYSCNVQSKVSDTGRNGPFFPLK----VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP--SYNWTRR 709 (813)
Q Consensus 636 ~G~Y~C~a~n~~g~~~~~~~~~~l~----v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p--~i~W~k~ 709 (813)
+|.|+|.|.|..+..... ..+. +..+|.+... +. ....+..| .++|.|.+.|.|+| .|+|+||
T Consensus 396 ~G~Y~C~a~n~~~~~~~~---~~~~~~~~~~~~P~v~~~--~~-----~~~~~~~~-~~~l~C~~~g~~p~~~~v~W~k~ 464 (523)
T 2rcj_C 396 GKEYKCKVSNKALPAPIE---KTISKAKGQPREPQVYTL--PP-----SREEMTKN-QVSLTCLVKGFYPSDIAVEWESN 464 (523)
T ss_pred CCeEEEEEeCCCCCCcee---EEEEcccCCCCCCEEEEe--CC-----ChHHccCC-ceEEEEEEEeeECCCCEEEEEEC
Confidence 999999999987754322 2333 3344443321 11 11223344 49999999998776 9999999
Q ss_pred CcccCCCcee---eec------ceEEEECCCCCCCCEEEEEEEEcCCC
Q psy14896 710 GSPLPRNAYF---ENF------NRILTIPNVKVEDQGEYICRASNDRS 748 (813)
Q Consensus 710 g~~l~~~~~~---~~~------~~~L~i~~v~~~d~G~Y~C~a~N~~G 748 (813)
|.++...... ... .+.|.|.....+|+|.|+|+|.|..-
T Consensus 465 g~~~~~~~~~~~~~~~~gt~~~~~~l~v~~~~~~~~g~Y~C~a~n~~l 512 (523)
T 2rcj_C 465 GQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 512 (523)
T ss_pred CEECCCeeeccceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEcCCc
Confidence 9998743221 111 23467777777899999999999753
No 16
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-46 Score=415.13 Aligned_cols=383 Identities=13% Similarity=0.112 Sum_probs=259.1
Q ss_pred CCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEccCc--cEEEeeeeecCCeeeEEEEeeeccccCC
Q psy14896 302 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG--ALYFSALEQIDAGNYSCNVQSKVSDTGR 379 (813)
Q Consensus 302 ~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 379 (813)
..+..+.+|+.++|.|.+ .+.|...+.|++++..+. ....+.....+ +|.|.+++.+|+|.|+|.|.|..+....
T Consensus 55 ~~~~~v~~g~~~~L~c~~-~~~~~~~~~W~~~~~~l~--~~~~~~~~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~ 131 (527)
T 3qs9_E 55 AAAVEVDVSASITLQVLV-DAPGNISCLWVFKHSSLN--CQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTI 131 (527)
T ss_dssp -CEEEECSSCCEEEEEEC-SCCSSCEEEEEETTEEEC--CCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEE
T ss_pred eeeEEEeccccEEEEEEE-ecCCceeEEEEecCCccC--cccccCCCcceEEEEEECcCChhhCeeEEEEEEeccccEEE
Confidence 336788899999999996 566779999999987532 22222222222 5999999999999999999988764321
Q ss_pred CCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeecCCCeeeEeecCCcCCCCceeccccceEEEcccc
Q psy14896 380 NGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVK 459 (813)
Q Consensus 380 ~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~ 459 (813)
.+.|.|. +.+.... ..+.....|+.+.|.|.+.|+|.|.|+|++++.++....
T Consensus 132 ---~~~v~v~--~~~~~~~-------~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~--------------- 184 (527)
T 3qs9_E 132 ---LFTVSIR--NTLLYTL-------RRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCK--------------- 184 (527)
T ss_dssp ---EEEEEEC-------CE-------EEEEEEECSSSSCEEEEEEESSCCEEEEEEC-----------------------
T ss_pred ---EEEEEEC--Cceeecc-------CCCcEEecCCceEEEEEEceecCCeEEEEECCCCCcccc---------------
Confidence 2444443 2111000 001112334445566666666666666655544331100
Q ss_pred cccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCC
Q psy14896 460 MRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 539 (813)
Q Consensus 460 ~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 539 (813)
........ ..... ...
T Consensus 185 ----------------------------------------------------------~~~~~~~~-----~~~~~-~~~ 200 (527)
T 3qs9_E 185 ----------------------------------------------------------EESPAVVK-----KEEKV-LHE 200 (527)
T ss_dssp ---------------------------------------------------------------CEE-----ECCSE-ECC
T ss_pred ----------------------------------------------------------ccCCcEEE-----Eeeee-ccc
Confidence 00000000 00111 247
Q ss_pred CCCceEEEEEEcCceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEE
Q psy14896 540 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVF 619 (813)
Q Consensus 540 ~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~ 619 (813)
+|+|.|+|.|.|..|...+..+.|.|..+|.+ .+....+.+|+.++|.|.+..+.|.+.|+|+|++.++... ..+.
T Consensus 201 ~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~--~~~~ 276 (527)
T 3qs9_E 201 LFGTDIRCCARNELGRECTRLFTIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEG--NYFE 276 (527)
T ss_dssp CCSSCEEEEEECSSCEEEEECEEEESSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGG--GEEE
T ss_pred cCCEEEEEEEEeCCCcccceEEEEEEeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCC--ceee
Confidence 89999999999999998776678888777665 3445677899999999999448999999999999864322 1111
Q ss_pred ---------EeeCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeE
Q psy14896 620 ---------VSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV 690 (813)
Q Consensus 620 ---------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v 690 (813)
....++|.|.+++.+|+|.|+|.|.|. ....+.|.|..+|.+... | ......+.+|+.+
T Consensus 277 ~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~------~~~~~~L~V~~~p~i~~~--~----~~~~~~v~~G~~v 344 (527)
T 3qs9_E 277 MSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH------PSQSALVTIVEKGFINAT--N----SSEDYEIDQYEEF 344 (527)
T ss_dssp EEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE------EEEEEEEEEC--CEEECC--C----SCCEECCCTTCCC
T ss_pred eeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC------CCceEEEEEEccCccccc--c----CcccEEEcCCCeE
Confidence 123356999999999999999999998 233477888877754321 1 1123668899999
Q ss_pred EEEEEecCCCCCeEEEEeCCcccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCcccccCCc
Q psy14896 691 RLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTD 770 (813)
Q Consensus 691 ~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~~~~~~~ 770 (813)
.|.|.+.|.|.|.|+|+|||.+|..+.+......+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|.|...+.
T Consensus 345 ~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~~~- 423 (527)
T 3qs9_E 345 CFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEAS- 423 (527)
T ss_dssp CEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEECCC-
T ss_pred EEEEEEEecCCCEEEEEECCEECcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEeCC-
Confidence 9999999999999999999999976655545567899999999999999999999999999999999999999875542
Q ss_pred eeecCCCeEEEEEEEcccCCceEEEEECCEec
Q psy14896 771 KHMDNQADLTWTCEAFGVPDVTYSWFRNGELG 802 (813)
Q Consensus 771 ~~~~~g~~~~l~C~~~g~p~~~v~W~k~g~~l 802 (813)
| ..|.|.+.|.|+|.|+|+|++..+
T Consensus 424 -----~--~~l~C~a~g~P~p~i~W~~~~~~~ 448 (527)
T 3qs9_E 424 -----A--SQASCFSDGYPLPSWTWKKCSDKS 448 (527)
T ss_dssp -----C--E---EEEECSSCCEEEEECCC---
T ss_pred -----C--CEEEEEEEEEcCCeEEEEECCCCc
Confidence 2 357999999999999999987655
No 17
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=1.6e-44 Score=388.06 Aligned_cols=373 Identities=30% Similarity=0.502 Sum_probs=277.9
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccc-
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV- 266 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~- 266 (813)
.+|.|+.+|.+..+.++ .+|++++|.|.+.|.|.|.|.|||||.++. ...+.++...+++|.|.+. ..
T Consensus 3 ~~P~~~~~p~~~~~~~~--~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~--------~~~~~~~~~~~~~L~i~~~-~~~ 71 (382)
T 1cs6_A 3 YGPVFEEQPAHTLFPEG--SAEEKVTLTCRARANPPATYRWKMNGTELK--------MGPDSRYRLVAGDLVISNP-VKA 71 (382)
T ss_dssp EEEEEEECCCCEEEETT--CSCCEEEECCEEEEESCCEEEEEETTEECC--------CSTTSSEEEETTEEEEESC-CHH
T ss_pred CCCEEEECCCcEEEecC--CCCCcEEEEEEecCCCCCEEEEEECCEECC--------cCCCccEEeeCCeEEEecc-ccc
Confidence 36899999999888554 356889999999999999999999998663 2345677778899999986 55
Q ss_pred cCCeeEEEEeecCceeeEeeeeEEeeeeecccccC-CCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccE
Q psy14896 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRV 345 (813)
Q Consensus 267 ~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~-~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~ 345 (813)
+|+|.|+|.|.|..|...+..+.|.|.+.+.+... ..+..+.+|+.++|.|.+..+.|.+.+.|+|++.++....+.+.
T Consensus 72 ~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~ 151 (382)
T 1cs6_A 72 KDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRR 151 (382)
T ss_dssp HHCEEEEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSE
T ss_pred ccCEEEEEEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceE
Confidence 99999999999999988777889999888776654 55677889999999999777889999999999988655555555
Q ss_pred EEcc-CccEEEeeeeecCCeeeEEEEeeeccccC--CCCCceeeEEccCCcccccccCCCC-CCCCCcCCCCCCcEEEEE
Q psy14896 346 FVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTG--RNGPFFPLKVFPHSNFQQLKFPNNF-PKTFPEAPKAGDKVRLEC 421 (813)
Q Consensus 346 ~~~~-~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~--~~s~~~~l~v~~~~~~~~~~~~~~~-~~~~~~~v~~g~~~~l~C 421 (813)
.+.. ++.|.|.+++.+|+|.|+|.|.|..|... ..+..+.|.+...... ...|... .......+.+|+.+.|.|
T Consensus 152 ~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~--~~~P~~~~~~~~~~~~~~G~~v~l~C 229 (382)
T 1cs6_A 152 FVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDAR--QYAPSIKAKFPADTYALTGQMVTLEC 229 (382)
T ss_dssp EECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCC--CEEEEEEECCCSEEEEETTCCEEEEC
T ss_pred EEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcc--cCCCceeccCCCceEEeCCCeEEEEE
Confidence 5544 47899999999999999999999875321 1233455555322000 0000000 001123345555555555
Q ss_pred EEeecCCCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEE
Q psy14896 422 VAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEW 501 (813)
Q Consensus 422 ~~~g~p~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W 501 (813)
.+.|.|.|.+.|++++..+..
T Consensus 230 ~~~g~p~~~i~W~~~~~~~~~----------------------------------------------------------- 250 (382)
T 1cs6_A 230 FAFGNPVPQIKWRKLDGSQTS----------------------------------------------------------- 250 (382)
T ss_dssp EEEEESCCEEEEEECCSCCSC-----------------------------------------------------------
T ss_pred EEccCCCCEEEEEECCccccc-----------------------------------------------------------
Confidence 555555555555554433211
Q ss_pred eeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecccccccCCCceec
Q psy14896 502 FKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 581 (813)
Q Consensus 502 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~ 581 (813)
.....++.|.|.++ ..+|+|.|+|.|.|..|.. +..+.|.|..+|.+........+.
T Consensus 251 ---------------------~~~~~~~~L~i~~~-~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~ 307 (382)
T 1cs6_A 251 ---------------------KWLSSEPLLHIQNV-DFEDEGTYECEAENIKGRD-TYQGRIIIHAQPDWLDVITDTEAD 307 (382)
T ss_dssp ---------------------CCSBSSSEEEECSC-CGGGCEEEEEEEEETTEEE-EEEEEEEEEEEEEEEECCCCEEEE
T ss_pred ---------------------EEecCCcEEEEccC-ChhhCEEEEEEEEcCCCeE-EEEEEEEEecCCCcccCCCccEEc
Confidence 11123567999997 8999999999999999986 455788998888887777777888
Q ss_pred cCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEE
Q psy14896 582 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 661 (813)
Q Consensus 582 ~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v 661 (813)
.|+.++|.|.+ .|.|.+.|+|+|+|.++ ....++.+ .+++|.|.++..+|+|.|+|.|.|..|.... .+.|.|
T Consensus 308 ~g~~~~l~C~~-~g~p~p~v~W~~~g~~~--~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~---~~~l~V 380 (382)
T 1cs6_A 308 IGSDLRWSCVA-SGKPRPAVRWLRDGQPL--ASQNRIEV-SGGELRFSKLVLEDSGMYQCVAENKHGTVYA---SAELTV 380 (382)
T ss_dssp TTCCEEEECEE-EEESCCEEEEEETTEEC--CCCSSEEE-ETTEEEESSCCGGGCEEEEEEEEETTEEEEE---EEEEEE
T ss_pred CCCeEEEEEEe-eeecCCEEEEEECCEEC--CCCceEEE-ECCEEEECcCCcccCEEEEEEEEeCCCeEEE---EEEEEE
Confidence 99999999999 79999999999999763 34455554 4678999999999999999999999987543 356665
Q ss_pred c
Q psy14896 662 F 662 (813)
Q Consensus 662 ~ 662 (813)
.
T Consensus 381 ~ 381 (382)
T 1cs6_A 381 Q 381 (382)
T ss_dssp E
T ss_pred e
Confidence 3
No 18
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=3e-44 Score=402.59 Aligned_cols=418 Identities=17% Similarity=0.205 Sum_probs=278.6
Q ss_pred CCCceeecCCCeEEEecCCCCCCcceEEEeecc--cccc-c---------cCCccEEEccC---ccEEEeeeeecCCeee
Q psy14896 302 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDY--FPNF-V---------EEDKRVFVSYD---GALYFSALEQIDAGNY 366 (813)
Q Consensus 302 ~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~--~~~~-~---------~~~~~~~~~~~---~~L~i~~v~~~D~G~Y 366 (813)
+....+.+|+.++|.|.+ .+.|.+.+.|+|++ ..+. + ....|+....+ ++|.|.+++.+|+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 85 (523)
T 2rcj_C 7 PPSASGTPGQRVTISCTG-TSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDY 85 (523)
T ss_pred CCceEEecCCcEEEEEEE-eccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEE
Confidence 456678899999999996 66789999999975 2211 0 11345554333 3799999999999999
Q ss_pred EEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeecCCC--eeeEeecCCcCCCCc
Q psy14896 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP--SYNWTRRGSPLPRNA 444 (813)
Q Consensus 367 ~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p--~i~W~~~~~~l~~~~ 444 (813)
+|.|.|..|.....+..+.|.|...+. .+|..........+.+|+.+.|.|.+.|.|++ .|+|+|+|.++....
T Consensus 86 ~C~a~n~~g~~~~~~~~~~l~V~~~~~----~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 161 (523)
T 2rcj_C 86 YCASWNSSDNSYVFGTGTKVTVLGQPK----ANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGV 161 (523)
T ss_pred EEEEccCCCccccccCceEEEeccCCC----cCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCce
Confidence 999999876433333447788853221 01111111112346678999999999887654 899999888775431
Q ss_pred eeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceE
Q psy14896 445 YFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRF 524 (813)
Q Consensus 445 ~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~ 524 (813)
.+.. ........+
T Consensus 162 ~~~~-------------------------------------------------------------------~~~~~~~~~ 174 (523)
T 2rcj_C 162 ETTK-------------------------------------------------------------------PSKQSNNKY 174 (523)
T ss_pred Eecc-------------------------------------------------------------------ccccCCCCE
Confidence 1100 000001111
Q ss_pred EeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEE----EeecccccccCCCceeccCCCceEEeCCCCCCCcc-
Q psy14896 525 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLA----FGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV- 599 (813)
Q Consensus 525 ~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~----v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~- 599 (813)
...+.|.|.++ ..+|+|.|+|.|.|..|..... +.+. +..+|.+........+.+|+.++|.|.+....|.+
T Consensus 175 -~~~s~L~i~~~-~~~d~G~Y~C~a~n~~~~~~~~-~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~ 251 (523)
T 2rcj_C 175 -AASSYLSLTPE-QWKSHRSYSCQVTHEGSTVEKT-VAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPV 251 (523)
T ss_pred -EEEEEEEEech-hcCCCceEEEEEEecCcccccc-eeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCe
Confidence 12246889886 8999999999999998765332 3322 12334333223334457899999999994334877
Q ss_pred EEEEccCCCCCcccCCCeEEEeeC------ccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccC
Q psy14896 600 NYYWARDYFPNFVEEDKRVFVSYD------GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFP 673 (813)
Q Consensus 600 ~v~W~k~~~~~~~~~~~~~~~~~~------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p 673 (813)
.|+|+|+|.++......+. ...+ ++|.|.++..+| |.|+|.|.|..|.... ...|.|...|.+... +
T Consensus 252 ~v~W~k~g~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~---~~~l~v~~~P~~~~~--~ 324 (523)
T 2rcj_C 252 TVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV---DKRVEPLSLPSVFLF--P 324 (523)
T ss_pred EEEEecCCcccceEeCCcE-ecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcce---EEecCCCcCceEEec--C
Confidence 8999999976322111111 1222 369999999999 9999999999987432 244555444433211 1
Q ss_pred CCCCCCCCcCCCCCCeEEEEEEecCCCC----CeEEEEeCCcccCCCcee---e------ecceEEEECCCCCCCCEEEE
Q psy14896 674 NNFPKTFPEAPKAGDKVRLECVAFGYPV----PSYNWTRRGSPLPRNAYF---E------NFNRILTIPNVKVEDQGEYI 740 (813)
Q Consensus 674 ~~~~~~~~~~~~~G~~v~l~C~~~g~P~----p~i~W~k~g~~l~~~~~~---~------~~~~~L~i~~v~~~d~G~Y~ 740 (813)
+.....+.+|+.++|.|.+.|.|+ +.|+|+|||.++...... . ...+.|.|.++..+|+|.|+
T Consensus 325 ----p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~ 400 (523)
T 2rcj_C 325 ----PKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYK 400 (523)
T ss_pred ----CCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEE
Confidence 111123788999999999999754 499999999988654321 1 11346999999999999999
Q ss_pred EEEEcCCCceEEEEEEE----EEcCCcccccCCc-eeecCCCeEEEEEEEcccCCc--eEEEEECCEeccccc
Q psy14896 741 CRASNDRSALESSVTIS----IQAEPNFTIPLTD-KHMDNQADLTWTCEAFGVPDV--TYSWFRNGELGHQMT 806 (813)
Q Consensus 741 C~a~N~~G~~~~~~~l~----V~~~P~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~--~v~W~k~g~~l~~~~ 806 (813)
|.|.|..|.......|. +..+|.+...+.. ..+..| .++|.|.+.|.|++ .|+|+|||++|..+.
T Consensus 401 C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~~~-~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~ 472 (523)
T 2rcj_C 401 CKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKN-QVSLTCLVKGFYPSDIAVEWESNGQPENNYK 472 (523)
T ss_pred EEEeCCCCCCceeEEEEcccCCCCCCEEEEeCCChHHccCC-ceEEEEEEEeeECCCCEEEEEECCEECCCee
Confidence 99999988776665565 4677876543333 334444 49999999998766 899999999997543
No 19
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=2e-45 Score=396.39 Aligned_cols=391 Identities=13% Similarity=0.088 Sum_probs=234.0
Q ss_pred cccCCeeEEEEeecCceeeEeeeeEEee------------eee---cccccCCCCceeecCCCeEEEecCCCCCCcceEE
Q psy14896 265 QVEDRGSYHCKASNKFGSIISESVQLAF------------GFI---GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYY 329 (813)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v------------~~~---~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~ 329 (813)
.-+|.|.|+|...+..+...+..++... ... +.+...+.+..+.+|+.+.|.|.+ .+.|.+.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~c~~~p~~~~~~~~~~~v~V~~G~~v~L~C~v-~g~P~p~i~ 81 (423)
T 3qs7_E 3 GNQDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLV-DAPGNISCL 81 (423)
T ss_dssp -----------------------------------------------------CEEEECSSCCEEEEEEC-SCCSSCEEE
T ss_pred ccCCCCeeEEEEEeccCCCccccccccchhhhCCHHHcCCccCCCCCcceeccccEEEecCCcEEEEEEE-EcCCCCeEE
Confidence 3578999999999765543233222221 111 223344557788999999999996 668999999
Q ss_pred EeeccccccccCCccEEEcc--CccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCC
Q psy14896 330 WARDYFPNFVEEDKRVFVSY--DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF 407 (813)
Q Consensus 330 W~k~~~~~~~~~~~~~~~~~--~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~ 407 (813)
|++++..+.. ........ ..+|.|.+++.+|+|.|+|.|.|..|.... .+.|.|..+|... . ..
T Consensus 82 W~~~~~~l~~--~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~---~~~l~V~~~p~~~-~--------~~ 147 (423)
T 3qs7_E 82 WVFKHSSLNC--QPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTI---LFTVSIRNTLLYT-L--------RR 147 (423)
T ss_dssp EEETTEEECC--CCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEE---EEEEEEC-----C-E--------EE
T ss_pred EEECCCccCc--cceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEE---EEEEEEecCcccc-c--------cC
Confidence 9999875322 11111111 126999999999999999999998875432 3677776433210 0 11
Q ss_pred CcCCCCCCcEEEEEEEeecCCCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEE
Q psy14896 408 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITL 487 (813)
Q Consensus 408 ~~~v~~g~~~~l~C~~~g~p~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l 487 (813)
+..+..|+.+.|.|.+.|+|.|.|+|++++..+.....
T Consensus 148 p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~------------------------------------------ 185 (423)
T 3qs7_E 148 PYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKE------------------------------------------ 185 (423)
T ss_dssp EEEEECSSSSCEEEEEEESSCCEEEEEEC---------------------------------------------------
T ss_pred CcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccc------------------------------------------
Confidence 11234456666677777777777777666553321000
Q ss_pred EEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEee
Q psy14896 488 SCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 567 (813)
Q Consensus 488 ~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~ 567 (813)
............+ ...|+|.|+|.|.|..|...+..+.|.|..
T Consensus 186 -------------------------------~~~~~~~~~~~~l------~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~ 228 (423)
T 3qs7_E 186 -------------------------------ESPAVVKKEEKVL------HELFGTDIRCCARNELGRECTRLFTIDLNQ 228 (423)
T ss_dssp -----------------------------------CEEECCSEE------CCCCSSCEEEEEECSSCEEEEECEEEESSS
T ss_pred -------------------------------cccccccccceEE------ecccCeEEEEEEEcCCCCcceeeEEEEEec
Confidence 0000000011111 467999999999999998766667788876
Q ss_pred cccccccCCCceeccCCCceEEeCCCCC-CCccEEEEccCCCCCcccCCC---eE----EEeeCccEEEEeecccCCeeE
Q psy14896 568 IGEFNLKRAPEIGNQNWGKAMFCDPPTN-YPGVNYYWARDYFPNFVEEDK---RV----FVSYDGALYFSALEQIDAGNY 639 (813)
Q Consensus 568 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~p~~~v~W~k~~~~~~~~~~~---~~----~~~~~~~L~i~~~~~~d~G~Y 639 (813)
+|.+ ......+.+|+.++|.|.+ .| .|.+.|+|+|+|.++...... .+ .....++|.|.+++.+|+|.|
T Consensus 229 ~p~~--~~~~~~v~~G~~v~L~C~~-~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 305 (423)
T 3qs7_E 229 TPQT--TLPQLFLKVGEPLWIRCKA-VHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYY 305 (423)
T ss_dssp CCCS--STTEEEEETTSCEEEEEEE-EESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEE
T ss_pred CCcc--CCCceEEeCCCeEEEEEEE-EcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEE
Confidence 6654 2335667889999999999 55 788999999999864221100 00 122345799999999999999
Q ss_pred EEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCcee
Q psy14896 640 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 719 (813)
Q Consensus 640 ~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~ 719 (813)
+|.|.|. ....+.|.|..+|.+... | ......+.+|+++.|.|.+.|+|.|.|+|+|||..|..+...
T Consensus 306 ~C~A~N~------~~~~~~L~V~~~p~i~~~--~----~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~ 373 (423)
T 3qs7_E 306 TCSSSKH------PSQSALVTIVEKGFINAT--N----SSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKG 373 (423)
T ss_dssp EEEETTE------EEEEEEEEEESSCEEEEC---------CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCB
T ss_pred EEEEecC------CCceEEEEEEeCCcceEc--C----CCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCcccc
Confidence 9999998 233477888887754322 1 112467889999999999999999999999999999765422
Q ss_pred eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCcc
Q psy14896 720 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNF 764 (813)
Q Consensus 720 ~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~ 764 (813)
......+.+.....+|+|.|+|.|.|..|..+.++.|.|..+|.-
T Consensus 374 ~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~ 418 (423)
T 3qs7_E 374 LDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKH 418 (423)
T ss_dssp CSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-------
T ss_pred ccCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCcc
Confidence 212223334667789999999999999999999999999988753
No 20
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=6e-44 Score=386.86 Aligned_cols=381 Identities=24% Similarity=0.395 Sum_probs=279.4
Q ss_pred CCCCceeeC-CCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEc---C
Q psy14896 187 PRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN---D 262 (813)
Q Consensus 187 ~~~P~~~~~-p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~---~ 262 (813)
..+|.|... +.+..+.+| ++++|.|.+.|.|.|.|.|+|||..+.... .........+++|.|. .
T Consensus 14 ~~~P~i~~~~~~~~~v~~G-----~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~------~~~~~~~~~~~~l~i~~~~~ 82 (404)
T 3p3y_A 14 TQPPTITKQSAKDHIVDPR-----DNILIECEAKGNPAPSFHWTRNSRFFNIAK------DPRVSMRRRSGTLVIDFRSG 82 (404)
T ss_dssp CCCCCEEEECCTTCEECSS-----SCCCCCEEECCSSCCEEEEEETTEECCGGG------CSSCBCCSSSCCCBCCCTTT
T ss_pred cCCCcccccCCccEEEcCC-----CCEEEEEEecCCCCCeEEEEECCEEeeeec------CCcceEecCCceEEEEeccC
Confidence 356888865 677788777 679999999999999999999998763211 1111112235666654 1
Q ss_pred CccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccC-CCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccC
Q psy14896 263 PRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE 341 (813)
Q Consensus 263 ~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~-~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~ 341 (813)
.++.+|+|.|+|.|.|..|...+..+.|.|..+|.+... ..+..+.+|+.++|.|.+..+.|.+.+.|++++... ...
T Consensus 83 ~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~-~~~ 161 (404)
T 3p3y_A 83 GRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEP-ITQ 161 (404)
T ss_dssp CCTTSSCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCB-CCC
T ss_pred CCCccCCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccc-cCC
Confidence 247899999999999999988778889999877765433 456788899999999997788999999999998643 455
Q ss_pred CccEEEccCccEEEeeeeecC-CeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCC--CCcCCCCCCcEE
Q psy14896 342 DKRVFVSYDGALYFSALEQID-AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKT--FPEAPKAGDKVR 418 (813)
Q Consensus 342 ~~~~~~~~~~~L~i~~v~~~D-~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~~ 418 (813)
..++....++.|.|.++..+| +|.|+|.|.|..+.....+..+.|.|...+......+....+.. ....+.+|+.+.
T Consensus 162 ~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~ 241 (404)
T 3p3y_A 162 DKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLL 241 (404)
T ss_dssp CSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEE
T ss_pred CCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEE
Confidence 667888889999999999999 59999999998876544455567777654332211111111100 112355666666
Q ss_pred EEEEEeecCCCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCc
Q psy14896 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPS 498 (813)
Q Consensus 419 l~C~~~g~p~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~ 498 (813)
|.|.+.|+|.|.+.|++++..+...
T Consensus 242 l~C~~~g~p~~~v~W~~~~~~~~~~------------------------------------------------------- 266 (404)
T 3p3y_A 242 LECIASGVPTPDIAWYKKGGDLPSD------------------------------------------------------- 266 (404)
T ss_dssp EECCBCCSSCCEEEEEETTBCCCTT-------------------------------------------------------
T ss_pred EEEEECCCCCCcEEEEECCEECCCC-------------------------------------------------------
Confidence 6666666666666666655544321
Q ss_pred EEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecccccccCCCc
Q psy14896 499 YEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE 578 (813)
Q Consensus 499 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~ 578 (813)
...+...+++|.|.++ ..+|+|.|+|.|.|..|.. +..+.|.|..+|.+.......
T Consensus 267 ----------------------~~~~~~~~~~L~i~~~-~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~ 322 (404)
T 3p3y_A 267 ----------------------KAKFENFNKALRITNV-SEEDSGEYFCLASNKMGSI-RHTISVRVKAAPYWLDEPKNL 322 (404)
T ss_dssp ----------------------TEEEEGGGTEEEESSC-CGGGCEEEEEEEECSSCEE-EEEEEEEEEEEEEEEECCCCE
T ss_pred ----------------------cccccccCceEEEccC-CHhHCEEEEEEEEeCCCcE-EEEEEEEEeCCCeeeccCCcc
Confidence 1122234568999997 9999999999999999986 456889999988887777778
Q ss_pred eeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecCccccCceee
Q psy14896 579 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 658 (813)
Q Consensus 579 ~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~ 658 (813)
.+.+|+.++|.|.+ .|.|.+.|+|+|+|.++............+++|.|.++..+|+|.|+|.|.|..|..... +.
T Consensus 323 ~v~~g~~~~l~C~~-~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~---~~ 398 (404)
T 3p3y_A 323 ILAPGEDGRLVCRA-NGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLAN---AF 398 (404)
T ss_dssp EECTTCCEEEECEE-EEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTEEEEEE---EE
T ss_pred eeecCCcEEEEEEc-cccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCCcEEEE---EE
Confidence 88999999999999 789999999999998754333222333456789999999999999999999999875443 55
Q ss_pred EEEc
Q psy14896 659 LKVF 662 (813)
Q Consensus 659 l~v~ 662 (813)
|.|.
T Consensus 399 l~V~ 402 (404)
T 3p3y_A 399 VSVL 402 (404)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 5553
No 21
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=3.1e-44 Score=384.92 Aligned_cols=332 Identities=31% Similarity=0.647 Sum_probs=261.7
Q ss_pred cceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCC
Q psy14896 462 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 541 (813)
Q Consensus 462 g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 541 (813)
++++...|.+..+... .+|+.+.|.|.+.|.|.|.|+|+|+|.++. .....++...+++|.|.+....+|
T Consensus 5 ~P~f~~~P~~~~~~~~--~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~--------~~~~~~~~~~~g~l~i~~~~~~~D 74 (384)
T 3kld_A 5 GPVFVQEPSHVMFPLD--SEEKKVKLSCEVKGNPKPHIRWKLNGTDVD--------IGMDFRYSVVDGSLLINNPNKTQD 74 (384)
T ss_dssp EEEEEECCCCEEEETT--CSCSEEEECCEEEEESCCEEEEEETTEECC--------C----CEEEETTEEEEESCCHHHH
T ss_pred CCEEEeCCcceEeecC--CCCCeEEEEeEecCCCCCEEEEEECCEECc--------CCCCccEEEECCEEEEcCCCCccc
Confidence 5677777777765332 478999999999999999999999997642 223445667788999988557789
Q ss_pred CceEEEEEEcCceeEEeecEEEEEeecccccccC-CCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEE
Q psy14896 542 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFV 620 (813)
Q Consensus 542 ~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~ 620 (813)
+|.|+|.|.|..|...+..+.+.+.+.+.+.... ....+.+|+.+.|.|.++.+.|.+.+.|++++.++. ....++..
T Consensus 75 ~G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~-~~~~~~~~ 153 (384)
T 3kld_A 75 AGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY-QDNRRFVS 153 (384)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECC-CSSSEEEC
T ss_pred CEEEEEEEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCE-eeccEEEE
Confidence 9999999999999987777888888777654433 345678899999999886677889999999997642 33344444
Q ss_pred eeCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEcc-------CCCccccccCCCCCCCCCcCCCCCCeEEEE
Q psy14896 621 SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP-------HSNFQQLKFPNNFPKTFPEAPKAGDKVRLE 693 (813)
Q Consensus 621 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~-------~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~ 693 (813)
..+++|.|.++..+|+|.|+|.|.|..|..........+.+.. .|.+. +. ......+.+|++++|.
T Consensus 154 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~-~~------~~~~~~~~~G~~v~l~ 226 (384)
T 3kld_A 154 QETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIE-VQ------FPETVPAEKGTTVKLE 226 (384)
T ss_dssp TTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEE-EE------CCSEEEEETTSCEEEE
T ss_pred cCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCcee-ec------CCCceEecCCCcEEEE
Confidence 5678899999999999999999999887543222222333321 11111 11 1122457899999999
Q ss_pred EEecCCCCCeEEEEeC-CcccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCcccccCCcee
Q psy14896 694 CVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKH 772 (813)
Q Consensus 694 C~~~g~P~p~i~W~k~-g~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~~~~~~~~~ 772 (813)
|.+.|.|.|.++|+|+ +.++....+....++.|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|.+...+.+..
T Consensus 227 C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~ 306 (384)
T 3kld_A 227 CFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIH 306 (384)
T ss_dssp EEEEEESCCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEE
T ss_pred EEEeecCCCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceE
Confidence 9999999999999994 556665555555577899999999999999999999999999999999999999998888999
Q ss_pred ecCCCeEEEEEEEcccCCceEEEEECCEecccccccccc
Q psy14896 773 MDNQADLTWTCEAFGVPDVTYSWFRNGELGHQMTDLLLK 811 (813)
Q Consensus 773 ~~~g~~~~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~i~ 811 (813)
+..|+++.|.|.+.|.|.|.|+|+|||++|..+.++.+.
T Consensus 307 v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~ 345 (384)
T 3kld_A 307 VAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIE 345 (384)
T ss_dssp ECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEE
T ss_pred ecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEe
Confidence 999999999999999999999999999999887776543
No 22
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=3e-43 Score=379.02 Aligned_cols=370 Identities=23% Similarity=0.341 Sum_probs=279.1
Q ss_pred CCceeeCCCce-eecCCCccccccEEEEeeeccCCCCeEEEee-cccccccccccccccCCCccEEeeCCeEEEcCCccc
Q psy14896 189 GPYFIKQPTDV-VFDLSKRSILNDITLSCYAGGYPNPSYEWFK-EDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266 (813)
Q Consensus 189 ~P~~~~~p~~~-~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 266 (813)
+|.|+.+|.+. .+.+| +.++|.|.+.|.|.|+|+|+| ||..+.. ....+....+++|.|.+. +.
T Consensus 3 ~P~f~~~p~~~~~~~~G-----~~v~l~C~~~g~p~p~v~W~k~~g~~~~~--------~~~~~~~~~~~~L~i~~~-~~ 68 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNS-----TGAEIECKASGNPMPEIIWIRSDGTAVGD--------VPGLRQISSDGKLVFPPF-RA 68 (388)
T ss_dssp EEEEEECCCSEEEEETT-----TCEEEECEEEEESCCEEEEEETTSCBCCC--------BTTTBEECSTTEEEECCC-CG
T ss_pred CCchhhCCCceEEEEcC-----ccEEEEEECCCCCCCEEEEEcCCCCcccc--------CCCceEEcCCceEEeccc-Ch
Confidence 68999998874 45566 669999999999999999999 7765531 223334456888999885 77
Q ss_pred cC------CeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCC--CcceEEEeecccccc
Q psy14896 267 ED------RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNY--PGVNYYWARDYFPNF 338 (813)
Q Consensus 267 ~d------~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~--p~~~v~W~k~~~~~~ 338 (813)
+| +|.|+|.|.|..|...+..+.|.+..+|.+........+.+|+.++|.|.+.... |.+.+.|++++..+.
T Consensus 69 ~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~ 148 (388)
T 2v5m_A 69 EDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENY 148 (388)
T ss_dssp GGCCHHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEE
T ss_pred hhccccccCceEEEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCccc
Confidence 76 9999999999999877788899988888887777788899999999999975433 348999999998753
Q ss_pred cc---CCccEEEccCccEEEeeeeecCC-eeeEEEEeeeccccCC-CCCceeeEEccCCcccccccCCCCCCCCCcCCCC
Q psy14896 339 VE---EDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGR-NGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA 413 (813)
Q Consensus 339 ~~---~~~~~~~~~~~~L~i~~v~~~D~-G~Y~C~a~n~~g~~~~-~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~ 413 (813)
.. ...++.+..++.|.|.+++.+|+ |.|+|.|.|..+.... ......|.|..+........+... ..+..+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~--~~~~~v~~ 226 (388)
T 2v5m_A 149 FPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALV--QKPLELMV 226 (388)
T ss_dssp CSSSCBTTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSC--CCCEEEET
T ss_pred ccccCCCCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCcccc--CCceEEee
Confidence 32 25677778889999999999999 9999999998654322 223345666654322212122221 12234677
Q ss_pred CCcEEEEEEEeecCCCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeec
Q psy14896 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGG 493 (813)
Q Consensus 414 g~~~~l~C~~~g~p~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g 493 (813)
|+.+.|.|.+.|+|.|.|.|++++..+.....
T Consensus 227 G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~------------------------------------------------ 258 (388)
T 2v5m_A 227 AHTISLLCPAQGFPAPSFRWYKFIEGTTRKQA------------------------------------------------ 258 (388)
T ss_dssp TSCEEECCCCEEESCCEEEEEEECTTSSCEEE------------------------------------------------
T ss_pred CCcEEEEEECCCCCCCEEEEEecCCCCccccc------------------------------------------------
Confidence 88888888888888888888887654321100
Q ss_pred cCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecccccc
Q psy14896 494 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL 573 (813)
Q Consensus 494 ~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~ 573 (813)
.....++...+++|.|.++ ..+|+|.|+|.|.|..|.. +..+.|.|..+|.+..
T Consensus 259 ------------------------~~~~~~~~~~~~~L~i~~v-~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~ 312 (388)
T 2v5m_A 259 ------------------------VVLNDRVKQVSGTLIIKDA-VVEDSGKYLCVVNNSVGGE-SVETVLTVTAPLSAKI 312 (388)
T ss_dssp ------------------------CCCSSSEEEETTEEEESSC-CGGGCEEEEEEEECSSCEE-EEEEEEEEEEEEEEEE
T ss_pred ------------------------ccccCceecccCEEEECcC-CHHHCeEEEEEEecCCCce-eEEEEEEEeCCCcccc
Confidence 0112234445679999997 9999999999999999986 4557889988888777
Q ss_pred cCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecCcccc
Q psy14896 574 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRN 653 (813)
Q Consensus 574 ~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 653 (813)
.+....+.+|+.++|.|.+ .|.|.+.|+|+|+|.++. . .+++|.|.++..+|+|.|+|.|.|..|.....
T Consensus 313 ~~~~~~v~~g~~~~l~C~~-~g~p~p~i~W~~~g~~i~--~-------~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 382 (388)
T 2v5m_A 313 DPPTQTVDFGRPAVFTCQY-TGNPIKTVSWMKDGKAIG--H-------SESVLRIESVKKEDKGMYQCFVRNDRESAEAS 382 (388)
T ss_dssp ESSEEEECTTSCEEEEEEE-EEECCCEEEEEETTEECS--C-------CSSEEEESSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CCCcEEecCCCCEEEEEEe-ccccCCeEEEEECCEECc--c-------CCCEEEEecCChhhCEEEEEEEEcCCCcEEEE
Confidence 7667778899999999999 799999999999997532 1 24679999999999999999999999875443
Q ss_pred CceeeEEE
Q psy14896 654 GPFFPLKV 661 (813)
Q Consensus 654 ~~~~~l~v 661 (813)
+.|.|
T Consensus 383 ---~~l~V 387 (388)
T 2v5m_A 383 ---AELKL 387 (388)
T ss_dssp ---EEEEE
T ss_pred ---EEEEe
Confidence 44544
No 23
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=1e-43 Score=384.89 Aligned_cols=368 Identities=21% Similarity=0.288 Sum_probs=284.7
Q ss_pred cccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEccCccEEEeee-----eecCCeeeEEEEee
Q psy14896 298 FNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSAL-----EQIDAGNYSCNVQS 372 (813)
Q Consensus 298 ~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~v-----~~~D~G~Y~C~a~n 372 (813)
+...+....+.+|+.++|.|.+..+.|.+.+.|+|||.++......+.....++.|.|.++ +.+|+|.|+|.|.|
T Consensus 24 ~~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~Y~C~~~~ 103 (403)
T 3laf_A 24 FVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASL 103 (403)
T ss_dssp EEECCCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECTTSCEEECSCCCBTTBCSSCEEEEEEEEC
T ss_pred EEeCCCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEecCCcEEEeeeeccCCCCCcceEEEEEEEe
Confidence 4455677788899999999998667888999999999987666678888888999999888 67899999999997
Q ss_pred eccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeecCCCeeeEeecCCcCCCCceeccccce
Q psy14896 373 KVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRI 452 (813)
Q Consensus 373 ~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~~~~l~~~~~~~~~~~~ 452 (813)
..+.. ..+..+.|.|..++.+. .......+.+|+.+.|.|.+.+.|.+.+.|++++..+....
T Consensus 104 ~~~~~-~~s~~~~l~v~~p~~~~--------~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~-------- 166 (403)
T 3laf_A 104 GDSGS-IISRTAKVMVAGPLRFL--------SQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIP-------- 166 (403)
T ss_dssp GGGCE-EECCCEEEEECCCCEEC--------SCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCT--------
T ss_pred CCCcc-EEEEEEEEEecCCCccc--------cCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccC--------
Confidence 64432 22344677776644322 11223467788888888888888888888888776653210
Q ss_pred EEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEE
Q psy14896 453 LTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLI 532 (813)
Q Consensus 453 l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 532 (813)
.........+++|.
T Consensus 167 ------------------------------------------------------------------~~~~~~~~~~~~L~ 180 (403)
T 3laf_A 167 ------------------------------------------------------------------GDSRVVVLPSGALQ 180 (403)
T ss_dssp ------------------------------------------------------------------TCCSEEECTTSCEE
T ss_pred ------------------------------------------------------------------CceEEEEcCCceEE
Confidence 01111222356899
Q ss_pred EeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecccc------cccCCCceeccCCCceEEeCCCCCCCccEEEEccC
Q psy14896 533 INDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF------NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARD 606 (813)
Q Consensus 533 i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~------~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~ 606 (813)
|.++ ..+|+|.|+|.|.|..|...+..+.+.|...|.+ ........+.+|+.++|.|.+ .+.|.+.+.|+|+
T Consensus 181 i~~~-~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~ 258 (403)
T 3laf_A 181 ISRL-QPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCV-SGYPPPSFTWLRG 258 (403)
T ss_dssp ECSC-CGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEE-EEESCCEEEEEET
T ss_pred Eccc-ccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEc-CCCCCCeEEEEEC
Confidence 9997 9999999999999998876556677777665532 223444567789999999999 6889999999999
Q ss_pred CCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCC
Q psy14896 607 YFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA 686 (813)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~ 686 (813)
+..+. ....++....+++|.|.++..+|+|.|+|.|.|..|... ..+.|.|..+|.+... +....+.+
T Consensus 259 ~~~~~-~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~---~~~~l~V~~~p~~~~~--------~~~~~~~~ 326 (403)
T 3laf_A 259 EEVIQ-LRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENIS---ASAELTVLVPPWFLNH--------PSNLYAYE 326 (403)
T ss_dssp TEECC-CSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEE---EEEEEEEEEEEEEEEC--------CCCEECCT
T ss_pred Ceecc-CCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceE---EEEEEEEECCCcEeec--------CcceEEec
Confidence 87643 234566666778899999999999999999999987643 3477888877755331 22356789
Q ss_pred CCeEEEEEEecCCCCCeEEEEeCCcccCCCceee-ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCC
Q psy14896 687 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE-NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 762 (813)
Q Consensus 687 G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 762 (813)
|++++|.|.+.|.|.|.|+|+|+|..+..+.++. ..++.|.|.++..+|+|.|+|.|.|..|..+.++.|.|..||
T Consensus 327 g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 327 SMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp TCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred CCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCCC
Confidence 9999999999999999999999999987665443 346789999999999999999999999999999999999886
No 24
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=1.3e-43 Score=382.91 Aligned_cols=376 Identities=22% Similarity=0.351 Sum_probs=265.9
Q ss_pred CCCCCceeeCCCceeecCCCccccccEEEEeeecc-CCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCc
Q psy14896 186 IPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGG-YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264 (813)
Q Consensus 186 ~~~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g-~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 264 (813)
+..||.|+..|.+..+.+| ++++|.|.+.+ .|.+.|+|+|+|..+.... ........+++|.|.+.
T Consensus 3 v~~~P~~~~~p~~~~v~~G-----~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~-------~~~~~~~~~~~L~i~~~- 69 (395)
T 1bih_A 3 VDKYPVLKDQPAEVLFREN-----NPTVLECIIEGNDQGVKYSWKKDGKSYNWQE-------HNAALRKDEGSLVFLRP- 69 (395)
T ss_dssp --CCCEECCCCSEEEEETT-----SCEEECCCEESCCSSCEEEEEESSSBCCTTT-------TTEEECTTSCCEEESSC-
T ss_pred cCCCCEeecCCCceEEeCC-----CEEEEEEEEecCCCCceEEEEECCcCccccc-------ceEEEecCCceEEEecC-
Confidence 3457999999999998887 66999999998 8999999999998763211 11112234678999886
Q ss_pred cccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccc--cccC-
Q psy14896 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPN--FVEE- 341 (813)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~--~~~~- 341 (813)
+.+|+|.|+|.|.|..|...+..+.|.|.+.+.+.+.+....+.+|+.++|.|.+..+.|.+.+.|+|++... ....
T Consensus 70 ~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~ 149 (395)
T 1bih_A 70 QASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVT 149 (395)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCC
T ss_pred CCCCCcEEEEEEEeCCCeEEeEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccc
Confidence 8999999999999999988667788888777666555556667789999999997788899999999997211 1111
Q ss_pred --CccEEEccCccEEEeeeeecCCe---eeEEEEeeeccccCCCCCceeeEEccCCccc-cc-ccCCCCCCCCCcCCCCC
Q psy14896 342 --DKRVFVSYDGALYFSALEQIDAG---NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ-QL-KFPNNFPKTFPEAPKAG 414 (813)
Q Consensus 342 --~~~~~~~~~~~L~i~~v~~~D~G---~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~-~~-~~~~~~~~~~~~~v~~g 414 (813)
..++....+++|.|.+++.+|+| .|+|.|.|..|..........+.+...+... .. ..|.. ......+.+|
T Consensus 150 ~~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G 227 (395)
T 1bih_A 150 DFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAG 227 (395)
T ss_dssp CCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETT
T ss_pred cccccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCceEEECC
Confidence 56778888899999999999999 9999999988753321111111111100000 00 00000 0111234455
Q ss_pred CcEEEEEEEeecCCCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeecc
Q psy14896 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGY 494 (813)
Q Consensus 415 ~~~~l~C~~~g~p~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~ 494 (813)
+.+.|.|.+.|+|.|.+.|++++..+...
T Consensus 228 ~~v~l~C~~~g~p~~~i~W~~~g~~~~~~--------------------------------------------------- 256 (395)
T 1bih_A 228 DVTMIYCMYGSNPMGYPNYFKNGKDVNGN--------------------------------------------------- 256 (395)
T ss_dssp SCEEEEEEEECSSCCCCEEEETTEECCCC---------------------------------------------------
T ss_pred CcEEEEEEeccCCCCeEEEEECCEEcCCC---------------------------------------------------
Confidence 55555555555555555555544433211
Q ss_pred CCCcEEEeeccccccceeccccCCCCCceEEe----eCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeeccc
Q psy14896 495 PNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL----SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE 570 (813)
Q Consensus 495 p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~ 570 (813)
...++.. .+..|.|.++ ..+|+|.|+|.|.|..|...+..+.|.|..+|.
T Consensus 257 -------------------------~~~~~~~~~~~~~~~L~i~~~-~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~ 310 (395)
T 1bih_A 257 -------------------------PEDRITRHNRTSGKRLLFKTT-LPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPK 310 (395)
T ss_dssp -------------------------TTSSEESCSSSTTSEEEESSC-CGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEE
T ss_pred -------------------------CceeEEEEecCCCceEEEccC-ChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCc
Confidence 1112211 1237999997 999999999999999998766578999999998
Q ss_pred ccccCCC-ceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecC
Q psy14896 571 FNLKRAP-EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSD 649 (813)
Q Consensus 571 ~~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 649 (813)
+...+.. ..+.+|+.++|.|.+ .|.|.+.|+|+|+|.++ .. .++.+. +++|.|.++..+|+|.|+|.|.|..|.
T Consensus 311 ~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~g~~~--~~-~~~~~~-~~~L~i~~~~~~d~G~Y~C~a~N~~G~ 385 (395)
T 1bih_A 311 YEQKPEKVIVVKQGQDVTIPCKV-TGLPAPNVVWSHNAKPL--SG-GRATVT-DSGLVIKGVKNGDKGYYGCRATNEHGD 385 (395)
T ss_dssp EEECCCSEEEECTTSCEEEECEE-EEESCCCCEEEETTEEC--CS-SSEEEE-TTEEEESSCCSTTCEEEEEEEEETTEE
T ss_pred cccCCCcceEecCCCeEEEEEEE-CcccCCeeEEEECCEEC--CC-CceEEE-CCEEEEeeCCcccCEEEEEEEEccCCC
Confidence 8776666 677899999999999 78999999999999763 22 255543 559999999999999999999999987
Q ss_pred ccccCceeeEEE
Q psy14896 650 TGRNGPFFPLKV 661 (813)
Q Consensus 650 ~~~~~~~~~l~v 661 (813)
... .+.|.|
T Consensus 386 ~~~---~~~l~V 394 (395)
T 1bih_A 386 KYF---ETLVQV 394 (395)
T ss_dssp EEE---EEEEEE
T ss_pred ceE---EEEEEE
Confidence 543 245554
No 25
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-42 Score=374.30 Aligned_cols=375 Identities=23% Similarity=0.314 Sum_probs=279.0
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeecc-CCCCeEEEeecccccccccccccccCCCccE-EeeCCeEEEcCC---
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGG-YPNPSYEWFKEDYVQDRLVANLIDPLSDKRF-TLSGGNLIINDP--- 263 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g-~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~-~~~~~~l~i~~~--- 263 (813)
...|..+|.+..+.+| ++++|.|.+.+ .|.+.|.|+|||..+.. ....++ ...+++|.|.+.
T Consensus 21 ~~~~~~~P~~~~v~~G-----~~v~L~C~~~~~~p~~~v~W~k~g~~~~~--------~~~~~~~~~~~~~l~i~~~~~~ 87 (403)
T 3laf_A 21 SLHFVSEPSDAVTMRG-----GNVLLNCSAESDRGVPVIKWKKDGLILAL--------GMDDRKQQLPNGSLLIQNILHS 87 (403)
T ss_dssp SSEEEECCCCEEECTT-----CCEEECCEEECTTCCCEEEEEETTEECCT--------TSCTTEEECTTSCEEECSCCCB
T ss_pred eEEEEeCCCceEEecC-----CcEEEEEEcCCCCCCceEEEEECCEECcc--------CCcccEEEecCCcEEEeeeecc
Confidence 4678899999999888 66999999976 68889999999986632 223333 345778877653
Q ss_pred -ccccCCeeEEEEeecC-ceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccc-c
Q psy14896 264 -RQVEDRGSYHCKASNK-FGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV-E 340 (813)
Q Consensus 264 -~~~~d~G~Y~C~a~n~-~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~-~ 340 (813)
++.+|+|.|+|.|.|. .|...+..+.|.|..++.+........+.+|+.++|.|.+ .+.|.+.+.|+|++..+.. .
T Consensus 88 ~~~~~D~G~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~ 166 (403)
T 3laf_A 88 RHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEV-IGDPMPTIHWQKNQQDLNPIP 166 (403)
T ss_dssp TTBCSSCEEEEEEEECGGGCEEECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCE-ECSSCCEEEEEESSSBCCCCT
T ss_pred CCCCCcceEEEEEEEeCCCccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEE-cccCCCeEEEEECCEeccccC
Confidence 2578999999999964 5555577788888877777777777888999999999996 6789999999999987532 4
Q ss_pred CCccEEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEE
Q psy14896 341 EDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLE 420 (813)
Q Consensus 341 ~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~ 420 (813)
...+.....++.|.|.+++.+|+|.|+|.|.|..+.. .+..+.|.|...+...... ..........+.+|+.+.|.
T Consensus 167 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~--~~~~~~l~v~~~p~~~~~~--~~~~~~~~~~~~~g~~~~l~ 242 (403)
T 3laf_A 167 GDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTR--TGNEAEVRILSDPGLHRQL--YFLQRPSNVIAIEGKDAVLE 242 (403)
T ss_dssp TCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCC--BCCCEEEEEECCCCCCEEE--EEEECCCCEEEETTSCEEEC
T ss_pred CceEEEEcCCceEEEcccccccCEEEEEEEEcCCCce--eccceeEEEecCCCcccCc--eEecCCCceEecCCCcEEEE
Confidence 4566777778899999999999999999999987642 2334677776554321100 00001112234556666666
Q ss_pred EEEeecCCCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEE
Q psy14896 421 CVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYE 500 (813)
Q Consensus 421 C~~~g~p~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~ 500 (813)
|.+.++|.|.+.|++++..+..
T Consensus 243 C~~~~~p~~~~~W~~~~~~~~~---------------------------------------------------------- 264 (403)
T 3laf_A 243 CCVSGYPPPSFTWLRGEEVIQL---------------------------------------------------------- 264 (403)
T ss_dssp CEEEEESCCEEEEEETTEECCC----------------------------------------------------------
T ss_pred EEcCCCCCCeEEEEECCeeccC----------------------------------------------------------
Confidence 6665555555555555544321
Q ss_pred EeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecccccccCCCcee
Q psy14896 501 WFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 580 (813)
Q Consensus 501 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~ 580 (813)
.........+++|.|.++ ..+|+|.|+|.|.|..|.. +..+.|.|..+|.+...+....+
T Consensus 265 ------------------~~~~~~~~~~~~L~i~~~-~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~ 324 (403)
T 3laf_A 265 ------------------RSKKYSLLGGSNLLISNV-TDDDSGTYTCVVTYKNENI-SASAELTVLVPPWFLNHPSNLYA 324 (403)
T ss_dssp ------------------SSSSEEEETTTEEEECSC-CGGGCEEEEEEEEETTEEE-EEEEEEEEEEEEEEEECCCCEEC
T ss_pred ------------------CCceEEECCccEEEEeCC-CHHHCEEEEEEEEcCCCce-EEEEEEEEECCCcEeecCcceEE
Confidence 111122234568999997 9999999999999998876 55688999888888777777778
Q ss_pred ccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEE
Q psy14896 581 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 660 (813)
Q Consensus 581 ~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~ 660 (813)
.+|+.++|.|.+ .|.|.+.|+|+|+|.. +....++.+..+++|.|.++..+|+|.|+|.|.|..|.... .+.|.
T Consensus 325 ~~g~~v~l~C~~-~g~p~p~v~W~~~g~~--~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~---~~~l~ 398 (403)
T 3laf_A 325 YESMDIEFECAV-SGKPVPTVNWMKNGDV--VIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQS---SAQLI 398 (403)
T ss_dssp CTTCCEEECCEE-EEESCCEEEEEETTEE--CCCSSSEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEE---EEEEE
T ss_pred ecCCeEEEEEEE-eeccCCEEEEEECCEE--CCCCCcEEEecCccEEEeccccccCEEEEEEEEcCCceEEE---EEEEE
Confidence 899999999999 7899999999999976 34455666777788999999999999999999999987644 36777
Q ss_pred EccCC
Q psy14896 661 VFPHS 665 (813)
Q Consensus 661 v~~~p 665 (813)
|..+|
T Consensus 399 V~~P~ 403 (403)
T 3laf_A 399 VPKPA 403 (403)
T ss_dssp CCCC-
T ss_pred EeCCC
Confidence 76653
No 26
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=2.9e-42 Score=372.28 Aligned_cols=373 Identities=22% Similarity=0.296 Sum_probs=269.3
Q ss_pred eeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEccCccEEEeeeeecCCeeeEEEE
Q psy14896 291 AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNV 370 (813)
Q Consensus 291 ~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 370 (813)
.|..+|.+...+....+.+|+.++|.|.+..+.|.+.++|+|+|.++............+++|.|.+++.+|+|.|+|.|
T Consensus 2 ~v~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 81 (395)
T 1bih_A 2 PVDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFA 81 (395)
T ss_dssp ---CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEE
T ss_pred CcCCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEEE
Confidence 45567777777777888999999999997555899999999999986544433334455679999999999999999999
Q ss_pred eeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEE-eecCCCeeeEeecCCcCCCCceeccc
Q psy14896 371 QSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-FGYPVPSYNWTRRGSPLPRNAYFENF 449 (813)
Q Consensus 371 ~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~i~W~~~~~~l~~~~~~~~~ 449 (813)
.|..|... +..+.|.|...+. |.. ......+.+|+.+.|.|.+ .+.|.+.|.|++++.......
T Consensus 82 ~n~~g~~~--s~~~~l~v~~~~~------p~~--~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~----- 146 (395)
T 1bih_A 82 ETPAGVAS--SRVISFRKTYLIA------SPA--KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNA----- 146 (395)
T ss_dssp EETTEEEE--CCCEEEEEEEEEC------CCC--EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGG-----
T ss_pred EeCCCeEE--eEEEEEEEEEeec------CCc--CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCccc-----
Confidence 99876533 2235555543221 111 1123467788888888886 677888888888762111000
Q ss_pred cceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEE-eeC
Q psy14896 450 NRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFT-LSG 528 (813)
Q Consensus 450 ~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~-~~~ 528 (813)
.......++. ..+
T Consensus 147 ------------------------------------------------------------------~~~~~~~~~~~~~~ 160 (395)
T 1bih_A 147 ------------------------------------------------------------------DVTDFDRRITAGPD 160 (395)
T ss_dssp ------------------------------------------------------------------CCCCCCTTEEECTT
T ss_pred ------------------------------------------------------------------ccccccccEEEcCC
Confidence 0000011222 245
Q ss_pred CeEEEeCCCCCCCCc---eEEEEEEcCceeEEeecE--EEEEee----------cccccccCCCceeccCCCceEEeCCC
Q psy14896 529 GNLIINDPRQVEDRG---SYHCKASNKFGSIISESV--QLAFGF----------IGEFNLKRAPEIGNQNWGKAMFCDPP 593 (813)
Q Consensus 529 ~~l~i~~~~~~~d~G---~Y~C~a~n~~g~~~s~~~--~l~v~~----------~p~~~~~~~~~~~~~g~~~~l~C~~~ 593 (813)
++|.|.++ ..+|+| .|+|.|.|..|....... .+.+.. +|.+ ......+.+|+.++|.|.+
T Consensus 161 ~~L~i~~v-~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~v~l~C~~- 236 (395)
T 1bih_A 161 GNLYFTIV-TKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAGDVTMIYCMY- 236 (395)
T ss_dssp SCEEEEEE-CGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETTSCEEEEEEE-
T ss_pred CcEEEEEE-eeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCceEEECCCcEEEEEEe-
Confidence 67999996 899999 999999999877422211 111111 1111 2345667889999999999
Q ss_pred CCCCccEEEEccCCCCCcccCCCeEEEe--eCc-cEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCcccc
Q psy14896 594 TNYPGVNYYWARDYFPNFVEEDKRVFVS--YDG-ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL 670 (813)
Q Consensus 594 ~~~p~~~v~W~k~~~~~~~~~~~~~~~~--~~~-~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~ 670 (813)
.|.|.+.++|+|+|.++......++... .++ +|.|.++..+|+|.|+|.|.|..|.... ..+.|.|..+|.+...
T Consensus 237 ~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~~l~V~~~P~~~~~ 314 (395)
T 1bih_A 237 GSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQK--HSLKLTVVSAPKYEQK 314 (395)
T ss_dssp ECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEE--EEEEEEEEEEEEEEEC
T ss_pred ccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceE--EEEEEEEEcCCccccC
Confidence 7899999999999976544444444432 223 6999999999999999999999886432 2478888888765432
Q ss_pred ccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCCce
Q psy14896 671 KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 750 (813)
Q Consensus 671 ~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 750 (813)
| .....+.+|++++|.|.+.|.|.|.|+|+|+|.++..+ ++...++.|+|.+++.+|+|.|+|.|.|.+|..
T Consensus 315 --~-----~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~ 386 (395)
T 1bih_A 315 --P-----EKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RATVTDSGLVIKGVKNGDKGYYGCRATNEHGDK 386 (395)
T ss_dssp --C-----CSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS-SEEEETTEEEESSCCSTTCEEEEEEEEETTEEE
T ss_pred --C-----CcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC-ceEEECCEEEEeeCCcccCEEEEEEEEccCCCc
Confidence 1 11156789999999999999999999999999999766 444445699999999999999999999999999
Q ss_pred EEEEEEEE
Q psy14896 751 ESSVTISI 758 (813)
Q Consensus 751 ~~~~~l~V 758 (813)
+.++.|.|
T Consensus 387 ~~~~~l~V 394 (395)
T 1bih_A 387 YFETLVQV 394 (395)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 99999987
No 27
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=1.2e-40 Score=379.12 Aligned_cols=410 Identities=17% Similarity=0.197 Sum_probs=289.1
Q ss_pred CCCceeecCCCeEEEecCCCCCCc---ceEEEeecccccc------------ccCCccEEEcc---Cc--cEEEeeeeec
Q psy14896 302 RAPEIGNQNWGKAMFCDPPTNYPG---VNYYWARDYFPNF------------VEEDKRVFVSY---DG--ALYFSALEQI 361 (813)
Q Consensus 302 ~~~~~~~~~~~~~l~C~~~~~~p~---~~v~W~k~~~~~~------------~~~~~~~~~~~---~~--~L~i~~v~~~ 361 (813)
+....+.+|+.++|.|.+ .+.|. +.+.|+|++..+. .....|+.+.. ++ +|.|.+++.+
T Consensus 7 P~~v~v~~G~~v~L~C~~-~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~ 85 (585)
T 2ocw_A 7 PEEVNSVEGNSVSITCYY-PPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQD 85 (585)
T ss_pred cceeEEecCCcEEEEEeC-CCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcc
Confidence 445678899999999996 44443 4899999986421 11224555543 23 6999999999
Q ss_pred CCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeec-CCCeeeEeecCCcC
Q psy14896 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVPSYNWTRRGSPL 440 (813)
Q Consensus 362 D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~-p~p~i~W~~~~~~l 440 (813)
|+|.|+|.|.|..+.. +..+.|.|..+|.+. .......+.+|+.+.|.|.+.+. |.+.+.|+|++..+
T Consensus 86 D~G~Y~C~~~n~~~~~---~~~~~l~V~~~p~~~--------~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~ 154 (585)
T 2ocw_A 86 DSGRYKCGLGINSRGL---SFDVSLEVSQGPGLL--------NDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLY 154 (585)
T ss_pred cCEEEEEEcccCCCCc---eEEEEEEEecCcccc--------CCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCC
Confidence 9999999999887653 334788887665432 22334568999999999999865 45689999987653
Q ss_pred CCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCC
Q psy14896 441 PRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 520 (813)
Q Consensus 441 ~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~ 520 (813)
..... . ..+. ..+..
T Consensus 155 ~~~~~-~-------------------------------------------~~~~---------------------~~~~~ 169 (585)
T 2ocw_A 155 PVLVI-D-------------------------------------------SSGY---------------------VNPNY 169 (585)
T ss_pred ceEEe-c-------------------------------------------CCcc---------------------cCccc
Confidence 21000 0 0000 00001
Q ss_pred CceEEe--eC-----CeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCC
Q psy14896 521 DKRFTL--SG-----GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP 593 (813)
Q Consensus 521 ~~~~~~--~~-----~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 593 (813)
..++.+ .+ .+|.|.++ ..+|+|.|+|.|.|..|.. +..+.|.|..++. ....+.+|+.++|.|.+.
T Consensus 170 ~~r~~~~~~~~~~~~~~L~I~~v-~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~p-----~~~~~~~G~~v~l~C~~~ 242 (585)
T 2ocw_A 170 TGRIRLDIQGTGQLLFSVVINQL-RLSDAGQYLCQAGDDSNSN-KKNADLQVLKPEP-----ELVYEDLRGSVTFHCALG 242 (585)
T ss_pred cCcEEEEeccCCCcEEEEEEccC-ChhHCeEEEEEeccCCccc-cceEEEEEccCCC-----ceeEEcCCCcEEEEEEcC
Confidence 111211 11 27999997 9999999999999998875 4557777765432 223467899999999973
Q ss_pred CCCCc-cEEEEc-cCCCCC--ccc--------CCCeEEEee---Cc--cEEEEeecccCCeeEEEEEEeeecCccc--cC
Q psy14896 594 TNYPG-VNYYWA-RDYFPN--FVE--------EDKRVFVSY---DG--ALYFSALEQIDAGNYSCNVQSKVSDTGR--NG 654 (813)
Q Consensus 594 ~~~p~-~~v~W~-k~~~~~--~~~--------~~~~~~~~~---~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~ 654 (813)
...|. +.+.|+ ++|... .+. ...++.+.. +| +|.|.+++.+|+|.|+|.|.|. |.... ..
T Consensus 243 ~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~~~~ 321 (585)
T 2ocw_A 243 PEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-GQLQEGSPI 321 (585)
T ss_pred CCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcC-CCccccCce
Confidence 22333 789997 887421 111 234454442 55 6999999999999999999995 43221 11
Q ss_pred ceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeE----EEEe--CCc--ccCCC---------c
Q psy14896 655 PFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSY----NWTR--RGS--PLPRN---------A 717 (813)
Q Consensus 655 ~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i----~W~k--~g~--~l~~~---------~ 717 (813)
..+.|.|..+|.+.. .+....+.+|++++|.|.+.|.|.|.+ +|+| ||. .+... .
T Consensus 322 ~~~~l~V~~~p~~~~--------~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~ 393 (585)
T 2ocw_A 322 QAWQLFVNEESTIPR--------SPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEG 393 (585)
T ss_pred eeEEEEEeccccccc--------CCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCC
Confidence 457788888775532 223356789999999999999999977 8999 887 55321 1
Q ss_pred eee------ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCcccccCCceeecCCCeEEEEEEEc----c
Q psy14896 718 YFE------NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAF----G 787 (813)
Q Consensus 718 ~~~------~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~----g 787 (813)
++. ....+|+|.+++.+|+|.|+|.| |..|..+..+.|.|..+|.....+....+.+|++++|.|.+. |
T Consensus 394 r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~ 472 (585)
T 2ocw_A 394 RLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSS 472 (585)
T ss_pred CEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCCCC
Confidence 221 11234999999999999999999 999999999999998754444447788899999999999997 7
Q ss_pred cCCceEEEEECCEecccc
Q psy14896 788 VPDVTYSWFRNGELGHQM 805 (813)
Q Consensus 788 ~p~~~v~W~k~g~~l~~~ 805 (813)
.|.+.|.|+|||++|..+
T Consensus 473 ~p~~~v~W~k~g~~~~~~ 490 (585)
T 2ocw_A 473 YEKYWCKWNNTGCQALPS 490 (585)
T ss_pred CccEEEEEeecCceeeec
Confidence 889999999999988543
No 28
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=2.7e-42 Score=373.81 Aligned_cols=368 Identities=18% Similarity=0.299 Sum_probs=268.2
Q ss_pred eeeecccccC-CCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEc-cCccEEEe----eeeecCCee
Q psy14896 292 FGFIGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS-YDGALYFS----ALEQIDAGN 365 (813)
Q Consensus 292 v~~~~~~~~~-~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~-~~~~L~i~----~v~~~D~G~ 365 (813)
+..+|.+... .....+.+|+.++|.|.+ .|.|.++++|+|||..+......++... .+++|.|. +++.+|+|.
T Consensus 13 ~~~~P~i~~~~~~~~~v~~G~~v~l~C~~-~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~ 91 (404)
T 3p3y_A 13 LTQPPTITKQSAKDHIVDPRDNILIECEA-KGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 91 (404)
T ss_dssp CCCCCCEEEECCTTCEECSSSCCCCCEEE-CCSSCCEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEE
T ss_pred ccCCCcccccCCccEEEcCCCCEEEEEEe-cCCCCCeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEE
Confidence 3445555543 456678899999999995 7789999999999988665555555544 45677775 888999999
Q ss_pred eEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEE-eecCCCeeeEeecCCcCCCCc
Q psy14896 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-FGYPVPSYNWTRRGSPLPRNA 444 (813)
Q Consensus 366 Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~i~W~~~~~~l~~~~ 444 (813)
|+|.|.|..|... +..+.|.|...|..... ...+..+.+|+.+.|.|.+ .+.|.+.+.|++++..+...
T Consensus 92 Y~C~a~n~~g~~~--s~~~~l~V~~~p~~~~~-------~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~- 161 (404)
T 3p3y_A 92 YQCFARNKFGTAL--SNRIRLQVSKSPLWPKE-------NLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQ- 161 (404)
T ss_dssp EEEEEECSSCEEE--EEEEEEEECCCCCCCCC-------CCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCC-
T ss_pred EEEEEEcCCCeEe--eeeEEEEEeccCccccC-------CCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCC-
Confidence 9999999876532 23467777765432211 1122457788888888887 66777777777765332110
Q ss_pred eeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceE
Q psy14896 445 YFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRF 524 (813)
Q Consensus 445 ~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~ 524 (813)
.....
T Consensus 162 ---------------------------------------------------------------------------~~~~~ 166 (404)
T 3p3y_A 162 ---------------------------------------------------------------------------DKRVS 166 (404)
T ss_dssp ---------------------------------------------------------------------------CSSEE
T ss_pred ---------------------------------------------------------------------------CCcEE
Confidence 11111
Q ss_pred EeeCCeEEEeCCCCCCC-CceEEEEEEcCceeEE--eecEEEEEeec-------ccccccC---CCceeccCCCceEEeC
Q psy14896 525 TLSGGNLIINDPRQVED-RGSYHCKASNKFGSII--SESVQLAFGFI-------GEFNLKR---APEIGNQNWGKAMFCD 591 (813)
Q Consensus 525 ~~~~~~l~i~~~~~~~d-~G~Y~C~a~n~~g~~~--s~~~~l~v~~~-------p~~~~~~---~~~~~~~g~~~~l~C~ 591 (813)
...+++|.|.++ ..+| +|.|+|.|.|..|... +..+.+.+... |.+.... ....+.+|+.++|.|.
T Consensus 167 ~~~~~~l~i~~v-~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~ 245 (404)
T 3p3y_A 167 QGHNGDLYFSNV-MLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECI 245 (404)
T ss_dssp ECTTSCEEESSC-CSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECC
T ss_pred EcCCCcEEEEee-eeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEE
Confidence 224567999997 8888 5999999999877532 22345555432 2222211 1234678999999999
Q ss_pred CCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccc
Q psy14896 592 PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLK 671 (813)
Q Consensus 592 ~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~ 671 (813)
+ .+.|.+.++|+|+|.++ ..........+++|.|.++..+|+|.|+|.|.|..|... ..+.|.|..+|.+..
T Consensus 246 ~-~g~p~~~v~W~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~---~~~~l~V~~~p~~~~-- 317 (404)
T 3p3y_A 246 A-SGVPTPDIAWYKKGGDL--PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIR---HTISVRVKAAPYWLD-- 317 (404)
T ss_dssp B-CCSSCCEEEEEETTBCC--CTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEE---EEEEEEEEEEEEEEE--
T ss_pred E-CCCCCCcEEEEECCEEC--CCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEE---EEEEEEEeCCCeeec--
Confidence 9 78999999999999863 333444445567899999999999999999999988643 347888888775543
Q ss_pred cCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCc---eeeecceEEEECCCCCCCCEEEEEEEEcCCC
Q psy14896 672 FPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA---YFENFNRILTIPNVKVEDQGEYICRASNDRS 748 (813)
Q Consensus 672 ~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~---~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 748 (813)
.+....+.+|+.++|.|.+.|.|.|.|+|+|+|..+.... .....+++|.|.+++.+|+|.|+|.|.|..|
T Consensus 318 ------~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 391 (404)
T 3p3y_A 318 ------EPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHG 391 (404)
T ss_dssp ------CCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTE
T ss_pred ------cCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCC
Confidence 1223567899999999999999999999999999886543 2333466899999999999999999999999
Q ss_pred ceEEEEEEEEEc
Q psy14896 749 ALESSVTISIQA 760 (813)
Q Consensus 749 ~~~~~~~l~V~~ 760 (813)
..+.++.|.|.+
T Consensus 392 ~~~~~~~l~V~d 403 (404)
T 3p3y_A 392 YLLANAFVSVLD 403 (404)
T ss_dssp EEEEEEEEEEC-
T ss_pred cEEEEEEEEEEe
Confidence 999999999864
No 29
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=5.3e-42 Score=376.89 Aligned_cols=380 Identities=12% Similarity=0.136 Sum_probs=262.3
Q ss_pred cCCCCceeecCCCeEEEecCCCCCCcceE-----EEeeccccccccCCccEEEccCccEEEeeeeecCCeeeEEEEeeec
Q psy14896 300 LKRAPEIGNQNWGKAMFCDPPTNYPGVNY-----YWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKV 374 (813)
Q Consensus 300 ~~~~~~~~~~~~~~~l~C~~~~~~p~~~v-----~W~k~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 374 (813)
+.+....+.+|+.++|.|.+ .| |.+.+ .|+|++..+. ..+ ...|.|.+++. |+| |+|.|.+..
T Consensus 4 ~~P~~~~v~~G~~v~L~C~~-~g-p~p~~~~~~~~w~k~~~~~~---~~~-----~~~l~i~~v~~-d~g-Y~C~a~~~~ 71 (450)
T 1z7z_I 4 VSPSKVILPRGGSVLVTCST-SC-DQPMLLGIETPLPKKELLLP---GNN-----RKVYELSNVQE-DSQ-PMCYSNCPD 71 (450)
T ss_dssp EESSEEEEETTEEEEEEEEC-CS-SCCCEEEECSSSCEEECCSS---TTT-----EEEEEEEEECS-CBC-CEEEEEETT
T ss_pred cCCCceEEecCCcEEEEEEc-cC-CCcccccccceeeecceEec---CCC-----ceEEEEEeccc-CCe-eEEEEeCCC
Confidence 34456678889999999996 55 88898 9999987531 111 13799999987 999 999997654
Q ss_pred cccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeecCCC---eeeEeecCCcCCCCceeccccc
Q psy14896 375 SDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP---SYNWTRRGSPLPRNAYFENFNR 451 (813)
Q Consensus 375 g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p---~i~W~~~~~~l~~~~~~~~~~~ 451 (813)
+.. +..+.|.|..+|......+ .+..+.+|+.+.|.|.+.+.|.+ .|+|+|++.++.....
T Consensus 72 ~~~---~~~~~l~V~~~P~~~~~~~-------~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~------ 135 (450)
T 1z7z_I 72 GQS---TAKTFLTVYWTPERVELAP-------LPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA------ 135 (450)
T ss_dssp EEE---EEECEEEEEBCCSEEEECC-------CCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEEC------
T ss_pred Ccc---eeEEEEEEEeCCCcceecC-------CCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccc------
Confidence 322 3347788876655432221 22468899999999999998877 8899888766532100
Q ss_pred eEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeE
Q psy14896 452 ILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNL 531 (813)
Q Consensus 452 ~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l 531 (813)
.. ...+++|
T Consensus 136 -------------------------------------------------------------------~~----~~~~~~L 144 (450)
T 1z7z_I 136 -------------------------------------------------------------------VG----EPAEVTT 144 (450)
T ss_dssp -------------------------------------------------------------------CT----TTEEEEE
T ss_pred -------------------------------------------------------------------cc----cccceEE
Confidence 00 0012478
Q ss_pred EEeCCCCCCCCceEEEEEEcCceeE-------EeecEEEEEeeccc-ccccCCCceeccCCCceEEeCCCCCC-C--ccE
Q psy14896 532 IINDPRQVEDRGSYHCKASNKFGSI-------ISESVQLAFGFIGE-FNLKRAPEIGNQNWGKAMFCDPPTNY-P--GVN 600 (813)
Q Consensus 532 ~i~~~~~~~d~G~Y~C~a~n~~g~~-------~s~~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~~-p--~~~ 600 (813)
.|.++ ..+|+|.|+|.|.|..|.. .+....+.|...+. ......+..+.+|+.++|.|.+ .+. | .+.
T Consensus 145 ~i~~~-~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~-~g~~P~~~~~ 222 (450)
T 1z7z_I 145 TVLVR-RDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSL-DGLFPVSEAQ 222 (450)
T ss_dssp EEECC-SSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEE-ESCTTGGGCE
T ss_pred EEEee-ccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEe-eCCCCCCceE
Confidence 89886 8999999999999986632 22344555543311 1111223667889999999999 566 7 799
Q ss_pred EEEccCCCCCcccCCCeEEEeeCccEEE---EeecccCCe--eEEEEEEeeecCccccCceeeEEEccCCCccccccCCC
Q psy14896 601 YYWARDYFPNFVEEDKRVFVSYDGALYF---SALEQIDAG--NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNN 675 (813)
Q Consensus 601 v~W~k~~~~~~~~~~~~~~~~~~~~L~i---~~~~~~d~G--~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~ 675 (813)
++|++++.++.. ++....++ +.+ .++..+|+| .|+|.|.|..|.... .+.|.|...|. ..+..
T Consensus 223 ~~W~~~~~~~~~----~~~~~~~~-~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~---~~~l~V~~~~~-p~i~~--- 290 (450)
T 1z7z_I 223 VHLALGDQRLNP----TVTYGNDS-FSAKASVSVTAEDEGTQRLTCAVILGNQSQET---LQTVTIYSFPA-PNVIL--- 290 (450)
T ss_dssp EEEEETTEECCC----EEEEETTE-EEEEEEEECCGGGCEEEEEEEEEEETTEEEEE---EEEEEEECCCC-CEEEE---
T ss_pred EEEeCCCEeCCc----eEEecCCc-eeEEEEEEeEhhhCCcEEEEEEEccCCccEEE---EEEEEEecCCC-CeEec---
Confidence 999999975322 33333333 222 277999999 999999998876433 46677776443 11211
Q ss_pred CCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCC----ceE
Q psy14896 676 FPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS----ALE 751 (813)
Q Consensus 676 ~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G----~~~ 751 (813)
.+..+.+|++++|.|.+. |.|.|+| +|.++... .....|.|.++..+|+|.|+|.|.|..| ..+
T Consensus 291 ----~~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~ 358 (450)
T 1z7z_I 291 ----TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL----GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKN 358 (450)
T ss_dssp ----SCSEEETTCEEEEEEEC------------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEE
T ss_pred ----CCeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCCC----CceEEEEEecCcccCCceEEEEEEcCCCCcccccc
Confidence 124688999999999998 8899999 88887321 1245899999999999999999998766 445
Q ss_pred EEEEEEEEcCCcccccC--CceeecCCCeEEEEEEEcccCCceEEEEECCEeccc
Q psy14896 752 SSVTISIQAEPNFTIPL--TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELGHQ 804 (813)
Q Consensus 752 ~~~~l~V~~~P~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~g~~l~~ 804 (813)
.++.|.|..+|.+...+ .+..+.+|++++|.|.+.|+|+|.|+|+|||+.+..
T Consensus 359 ~~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~ 413 (450)
T 1z7z_I 359 QTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLP 413 (450)
T ss_dssp EEEECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECC
T ss_pred eeEEEEEecCCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCC
Confidence 78999999999987654 677899999999999999999999999999985544
No 30
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=1.1e-40 Score=358.18 Aligned_cols=329 Identities=33% Similarity=0.624 Sum_probs=262.3
Q ss_pred cceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCC-C
Q psy14896 462 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV-E 540 (813)
Q Consensus 462 g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~-~ 540 (813)
++.+...|.+..+.. ..+|+.++|.|.+.|.|.+.|.|+|+|..+ ......++...+++|.|.++ .. +
T Consensus 4 ~P~~~~~p~~~~~~~--~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~--------~~~~~~~~~~~~~~L~i~~~-~~~~ 72 (382)
T 1cs6_A 4 GPVFEEQPAHTLFPE--GSAEEKVTLTCRARANPPATYRWKMNGTEL--------KMGPDSRYRLVAGDLVISNP-VKAK 72 (382)
T ss_dssp EEEEEECCCCEEEET--TCSCCEEEECCEEEEESCCEEEEEETTEEC--------CCSTTSSEEEETTEEEEESC-CHHH
T ss_pred CCEEEECCCcEEEec--CCCCCcEEEEEEecCCCCCEEEEEECCEEC--------CcCCCccEEeeCCeEEEecc-cccc
Confidence 344555555554421 257899999999999999999999999664 22334567778899999997 65 9
Q ss_pred CCceEEEEEEcCceeEEeecEEEEEeeccccccc-CCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEE
Q psy14896 541 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVF 619 (813)
Q Consensus 541 d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~ 619 (813)
|+|.|+|.|.|..|...+..+.|.|..++.+... ..+..+.+|+.++|.|.+..+.|.+.++|+|++.++....+.+..
T Consensus 73 D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 152 (382)
T 1cs6_A 73 DAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRF 152 (382)
T ss_dssp HCEEEEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEE
T ss_pred cCEEEEEEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEE
Confidence 9999999999999988777788888877765543 455678899999999997677889999999999876555555555
Q ss_pred Ee-eCccEEEEeecccCCeeEEEEEEeeecCcccc--CceeeEEEcc------CCCccccccCCCCCCCCCcCCCCCCeE
Q psy14896 620 VS-YDGALYFSALEQIDAGNYSCNVQSKVSDTGRN--GPFFPLKVFP------HSNFQQLKFPNNFPKTFPEAPKAGDKV 690 (813)
Q Consensus 620 ~~-~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~--~~~~~l~v~~------~p~~~~~~~p~~~~~~~~~~~~~G~~v 690 (813)
+. .+++|.|.+++.+|+|.|+|.|.|..|..... ...+.|.|.. +|.+.. .......+.+|+.+
T Consensus 153 ~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~-------~~~~~~~~~~G~~v 225 (382)
T 1cs6_A 153 VSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKA-------KFPADTYALTGQMV 225 (382)
T ss_dssp ECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEE-------CCCSEEEEETTCCE
T ss_pred EecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceec-------cCCCceEEeCCCeE
Confidence 54 44789999999999999999999988543211 2234455432 221111 01223567899999
Q ss_pred EEEEEecCCCCCeEEEEeCCcccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCcccccCCc
Q psy14896 691 RLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTD 770 (813)
Q Consensus 691 ~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~~~~~~~ 770 (813)
+|.|.+.|.|.|.++|+|++..+.. ........|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+|.+...+..
T Consensus 226 ~l~C~~~g~p~~~i~W~~~~~~~~~--~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~ 303 (382)
T 1cs6_A 226 TLECFAFGNPVPQIKWRKLDGSQTS--KWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITD 303 (382)
T ss_dssp EEECEEEEESCCEEEEEECCSCCSC--CCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCC
T ss_pred EEEEEEccCCCCEEEEEECCccccc--EEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCc
Confidence 9999999999999999999988754 23345678999999999999999999999999999999999999999888888
Q ss_pred eeecCCCeEEEEEEEcccCCceEEEEECCEeccccccccc
Q psy14896 771 KHMDNQADLTWTCEAFGVPDVTYSWFRNGELGHQMTDLLL 810 (813)
Q Consensus 771 ~~~~~g~~~~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~i 810 (813)
..+.+|+.++|.|.+.|.|.|.|.|+|||++|..+.++.+
T Consensus 304 ~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~ 343 (382)
T 1cs6_A 304 TEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEV 343 (382)
T ss_dssp EEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEE
T ss_pred cEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEE
Confidence 8999999999999999999999999999999988776543
No 31
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=1.8e-40 Score=357.28 Aligned_cols=321 Identities=22% Similarity=0.346 Sum_probs=254.1
Q ss_pred ccccCeEEEEEeeccCCCcEEEee-ccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCC------CceEEEEEEcC
Q psy14896 480 SILNDITLSCYAGGYPNPSYEWFK-EDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED------RGSYHCKASNK 552 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d------~G~Y~C~a~n~ 552 (813)
.+|+.++|.|.+.|.|.|.|.|+| +|..+.. ....+....+++|.|.++ ..+| +|.|+|.|.|.
T Consensus 17 ~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~--------~~~~~~~~~~~~L~i~~~-~~~d~~~~~d~G~Y~C~a~n~ 87 (388)
T 2v5m_A 17 SNSTGAEIECKASGNPMPEIIWIRSDGTAVGD--------VPGLRQISSDGKLVFPPF-RAEDYRQEVHAQVYACLARNQ 87 (388)
T ss_dssp ETTTCEEEECEEEEESCCEEEEEETTSCBCCC--------BTTTBEECSTTEEEECCC-CGGGCCHHHHEEEEEEEEEET
T ss_pred EcCccEEEEEECCCCCCCEEEEEcCCCCcccc--------CCCceEEcCCceEEeccc-ChhhccccccCceEEEEEEcc
Confidence 679999999999999999999999 7755421 122334456789999997 7776 99999999999
Q ss_pred ceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCC---ccEEEEccCCCCCccc---CCCeEEEeeCccE
Q psy14896 553 FGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP---GVNYYWARDYFPNFVE---EDKRVFVSYDGAL 626 (813)
Q Consensus 553 ~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p---~~~v~W~k~~~~~~~~---~~~~~~~~~~~~L 626 (813)
.|...+..+.|.+..+|.+........+.+|+.++|.|.+. +.+ .+.|+|+|++..+... ...++.+..+++|
T Consensus 88 ~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~-~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L 166 (388)
T 2v5m_A 88 FGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIP-SFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGEL 166 (388)
T ss_dssp TEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCC-TTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTSCE
T ss_pred CCeEEecceEEEEccccccccCccceeeecCCcEEEEEECc-CCCCCCcceEEEEeCCCcccccccCCCCcEEEccCCcE
Confidence 99877777888888888877777777889999999999994 443 4899999998764322 2457777788999
Q ss_pred EEEeecccCC-eeEEEEEEeeecCccc-cCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeE
Q psy14896 627 YFSALEQIDA-GNYSCNVQSKVSDTGR-NGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSY 704 (813)
Q Consensus 627 ~i~~~~~~d~-G~Y~C~a~n~~g~~~~-~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i 704 (813)
.|.+++.+|+ |.|+|.|.|..+.... ......|.|..+.......+|... ..+..+.+|+.++|.|.+.|.|.|.|
T Consensus 167 ~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~--~~~~~v~~G~~v~l~C~~~g~p~p~v 244 (388)
T 2v5m_A 167 HIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALV--QKPLELMVAHTISLLCPAQGFPAPSF 244 (388)
T ss_dssp EESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSC--CCCEEEETTSCEEECCCCEEESCCEE
T ss_pred EEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCcccc--CCceEEeeCCcEEEEEECCCCCCCEE
Confidence 9999999999 9999999998654322 222345666655322211122211 12245788999999999999999999
Q ss_pred EEEeCCcccC------CCceeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCcccccCCceeecCCCe
Q psy14896 705 NWTRRGSPLP------RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQAD 778 (813)
Q Consensus 705 ~W~k~g~~l~------~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~ 778 (813)
+|+|++..+. .+.++....+.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+|.+...+....+.+|++
T Consensus 245 ~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~ 324 (388)
T 2v5m_A 245 RWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRP 324 (388)
T ss_dssp EEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSC
T ss_pred EEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCC
Confidence 9999865443 2233444567899999999999999999999999999999999999999888888889999999
Q ss_pred EEEEEEEcccCCceEEEEECCEecccccc-ccccc
Q psy14896 779 LTWTCEAFGVPDVTYSWFRNGELGHQMTD-LLLKA 812 (813)
Q Consensus 779 ~~l~C~~~g~p~~~v~W~k~g~~l~~~~~-~~i~~ 812 (813)
++|.|.+.|.|.|.|+|+|||++|..+.. +.|.+
T Consensus 325 ~~l~C~~~g~p~p~i~W~~~g~~i~~~~~~L~i~~ 359 (388)
T 2v5m_A 325 AVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIES 359 (388)
T ss_dssp EEEEEEEEEECCCEEEEEETTEECSCCSSEEEESS
T ss_pred EEEEEEeccccCCeEEEEECCEECccCCCEEEEec
Confidence 99999999999999999999999976543 55543
No 32
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=363.44 Aligned_cols=350 Identities=12% Similarity=0.124 Sum_probs=217.5
Q ss_pred eecCCeeeEEEEeeeccccCCC-CCceeeEEccCCccccccc----CCCCCCCCCcCCCCCCcEEEEEEEeecCCCeeeE
Q psy14896 359 EQIDAGNYSCNVQSKVSDTGRN-GPFFPLKVFPHSNFQQLKF----PNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNW 433 (813)
Q Consensus 359 ~~~D~G~Y~C~a~n~~g~~~~~-s~~~~l~v~~~~~~~~~~~----~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W 433 (813)
...|.|.|.|.+.+..+..... .......+...+....... +..+-...+..|.+|+++.|.|.+.|.|.|.|.|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~c~~~p~~~~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W 82 (423)
T 3qs7_E 3 GNQDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLW 82 (423)
T ss_dssp -----------------------------------------------------CEEEECSSCCEEEEEECSCCSSCEEEE
T ss_pred ccCCCCeeEEEEEeccCCCccccccccchhhhCCHHHcCCccCCCCCcceeccccEEEecCCcEEEEEEEEcCCCCeEEE
Confidence 3568899999998774433221 1112212221111111111 1111122256799999999999999999999999
Q ss_pred eecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceec
Q psy14896 434 TRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVA 513 (813)
Q Consensus 434 ~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~ 513 (813)
++++..+.....+.
T Consensus 83 ~~~~~~l~~~~~~~------------------------------------------------------------------ 96 (423)
T 3qs7_E 83 VFKHSSLNCQPHFD------------------------------------------------------------------ 96 (423)
T ss_dssp EETTEEECCCCBC-------------------------------------------------------------------
T ss_pred EECCCccCccceec------------------------------------------------------------------
Confidence 88876653211000
Q ss_pred cccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCC
Q psy14896 514 NLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP 593 (813)
Q Consensus 514 ~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 593 (813)
...+. ..+|.|.++ +.+|+|.|+|.|.|..|.. +..+.|.|..+|.+. ...+.....|..++|.|.+
T Consensus 97 ------~~~~~---~~sL~I~~v-~~~D~G~Y~C~a~N~~g~~-~~~~~l~V~~~p~~~-~~~p~~~~~~~~~~L~C~a- 163 (423)
T 3qs7_E 97 ------LQNRG---VVSMVILKM-TETQAGEYLLFIQSEATNY-TILFTVSIRNTLLYT-LRRPYFRKMENQDALVCIS- 163 (423)
T ss_dssp ----------C---EEEEEESSC-CSSSCSEEEEEEEC--CEE-EEEEEEEEC-----C-EEEEEEEECSSSSCEEEEE-
T ss_pred ------cccce---EEEEEEeec-CcccCEEEEEEEEcCCCcE-EEEEEEEEecCcccc-ccCCcEeccCCceEEEEEE-
Confidence 00010 125889997 9999999999999998876 445778887655442 2334455668889999999
Q ss_pred CCCCccEEEEccCCCCCcccCC-CeEEEeeCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCcccccc
Q psy14896 594 TNYPGVNYYWARDYFPNFVEED-KRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKF 672 (813)
Q Consensus 594 ~~~p~~~v~W~k~~~~~~~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~ 672 (813)
.|.|.|.|+|+|++.+...... ....+.....+ +..+|+|.|+|.|.|..|.... ..+.|.|..+|...
T Consensus 164 ~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~----l~~~d~G~Y~C~A~N~~G~~~~--~~~~l~V~~~p~~~---- 233 (423)
T 3qs7_E 164 ESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKV----LHELFGTDIRCCARNELGRECT--RLFTIDLNQTPQTT---- 233 (423)
T ss_dssp EESSCCEEEEEEC-------------CEEECCSE----ECCCCSSCEEEEEECSSCEEEE--ECEEEESSSCCCSS----
T ss_pred eeecCCeEEEEECCCCCccccccccccccccceE----EecccCeEEEEEEEcCCCCcce--eeEEEEEecCCccC----
Confidence 8999999999999864211000 00001111111 1578999999999999986433 34667777665431
Q ss_pred CCCCCCCCCcCCCCCCeEEEEEEecC-CCCCeEEEEeCCcccCCCcee----------eecceEEEECCCCCCCCEEEEE
Q psy14896 673 PNNFPKTFPEAPKAGDKVRLECVAFG-YPVPSYNWTRRGSPLPRNAYF----------ENFNRILTIPNVKVEDQGEYIC 741 (813)
Q Consensus 673 p~~~~~~~~~~~~~G~~v~l~C~~~g-~P~p~i~W~k~g~~l~~~~~~----------~~~~~~L~i~~v~~~d~G~Y~C 741 (813)
.....+.+|++++|.|.+.| .|.|.|+|+|+|..+.....+ .....+|.|.+++.+|+|.|+|
T Consensus 234 ------~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 307 (423)
T 3qs7_E 234 ------LPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTC 307 (423)
T ss_dssp ------TTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEE
T ss_pred ------CCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEE
Confidence 11356889999999999998 677999999999988665322 2223579999999999999999
Q ss_pred EEEcCCCceEEEEEEEEEcCCcccccC--CceeecCCCeEEEEEEEcccCCceEEEEECCEeccccc
Q psy14896 742 RASNDRSALESSVTISIQAEPNFTIPL--TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELGHQMT 806 (813)
Q Consensus 742 ~a~N~~G~~~~~~~l~V~~~P~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~g~~l~~~~ 806 (813)
.|.|. .+.++.|.|..+|.+...+ ....+.+|+++.|.|.+.|.|+|.|+|+|||++|..+.
T Consensus 308 ~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~ 371 (423)
T 3qs7_E 308 SSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQ 371 (423)
T ss_dssp EETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBC
T ss_pred EEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCcc
Confidence 99998 8889999999999876543 45678899999999999999999999999999997764
No 33
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=6.1e-38 Score=333.69 Aligned_cols=313 Identities=13% Similarity=0.136 Sum_probs=226.0
Q ss_pred ceeecCCCeEEEecCCCCCCcceEEEeeccccccc------------cCCccEEEcc------CccEEEeeeeecCCeee
Q psy14896 305 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV------------EEDKRVFVSY------DGALYFSALEQIDAGNY 366 (813)
Q Consensus 305 ~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~------------~~~~~~~~~~------~~~L~i~~v~~~D~G~Y 366 (813)
..+.+|+.++|.|.+ .+.|.+.+.|+|++..+.. ....|+.+.. +.+|.|.+++.+|+|.|
T Consensus 4 v~~~~G~~v~L~C~~-~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 4 VLGKKGDTVELTCTA-SQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEEETTSCEEECCCC-TTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred EEEeCCCeEEEEEEe-cCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 356789999999996 5889999999999864221 1234554432 45799999999999999
Q ss_pred EEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeecCCCeeeEeecCCcCCCCcee
Q psy14896 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446 (813)
Q Consensus 367 ~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~~~~l~~~~~~ 446 (813)
+|.|.|..+ .+.|.|.... ..| ...+.+|+.+.|.|.+.+.
T Consensus 83 ~C~~~n~~~-------~~~l~V~~~~-----~~~-------~~~v~~G~~v~l~C~~~~~-------------------- 123 (363)
T 1wio_A 83 ICEVEDQKE-------EVQLLVFGLT-----ANS-------DTHLLQGQSLTLTLESPPG-------------------- 123 (363)
T ss_dssp EEEETTEEE-------EEEEEEEEEE-----ESS-------CSSEESBSCEEEEEECCTT--------------------
T ss_pred EEEEEECCC-------cEEEEEEeCC-----CCC-------ceEEecCCCEEEEEEcCCC--------------------
Confidence 999998753 2566664310 000 1234455555555555444
Q ss_pred ccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEe
Q psy14896 447 ENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL 526 (813)
Q Consensus 447 ~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~ 526 (813)
|.|.+.|+|+|.. ...
T Consensus 124 ------------------------------------------------p~~~v~W~~~~~~----------------~~~ 139 (363)
T 1wio_A 124 ------------------------------------------------SSPSVQCRSPRGK----------------NIQ 139 (363)
T ss_dssp ------------------------------------------------CCCCEEEECSSSC----------------EEE
T ss_pred ------------------------------------------------CCCeEEEEcCCCc----------------ccc
Confidence 4445555555421 123
Q ss_pred eCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCC-----CCccEE
Q psy14896 527 SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTN-----YPGVNY 601 (813)
Q Consensus 527 ~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-----~p~~~v 601 (813)
..+.|.|.++ ..+|+|.|+|.|.|..+.. ...+.+.|..+|... ....+.+|+.++|.|.+ .+ +|.+.|
T Consensus 140 ~~~~L~i~~v-~~~d~G~Y~C~a~~~~~~~-~~~~~l~v~~~p~~~---~~~~~~~G~~v~l~C~~-~~~~~~~~P~p~i 213 (363)
T 1wio_A 140 GGKTLSVSQL-ELQDSGTWTCTVLQNQKKV-EFKIDIVVLAFQKAS---SIVYKKEGEQVEFSFPL-AFTVEKLTGSGEL 213 (363)
T ss_dssp ESSEEEECSB-CGGGCEECEEEEEETTEEE-EECCEECEECCSCSE---EEEEEETBCCEEEECCC-CCCCCSSCEEEEE
T ss_pred cceEEEEeeC-ChhcCCEEEEEEecCCCeE-EEEEEEEEecCCCCC---CceEEecCCEEEEEEEE-ecccccCCCceeE
Confidence 5578999996 9999999999999986665 444667776555432 34557789999999988 45 789999
Q ss_pred EEccCCCCCccc------CCCeEEEe-----------e--CccEEEEeecccCCeeEEEEEEee--ecCccccCceeeEE
Q psy14896 602 YWARDYFPNFVE------EDKRVFVS-----------Y--DGALYFSALEQIDAGNYSCNVQSK--VSDTGRNGPFFPLK 660 (813)
Q Consensus 602 ~W~k~~~~~~~~------~~~~~~~~-----------~--~~~L~i~~~~~~d~G~Y~C~a~n~--~g~~~~~~~~~~l~ 660 (813)
+|+|+|.++... .+.++.+. . .++|.|.++..+|+|.|+|.|.|. .|... ..+.|.
T Consensus 214 ~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~---~~~~l~ 290 (363)
T 1wio_A 214 WWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLH---QEVNLV 290 (363)
T ss_dssp EEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEE---EEEEEE
T ss_pred EEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEE---EEEeEE
Confidence 999999864331 13444442 2 337999999999999999999999 87543 335666
Q ss_pred EccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCe--EEEEeCCcccCCCceeeecceEEEECCCCCCCCEE
Q psy14896 661 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS--YNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGE 738 (813)
Q Consensus 661 v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~--i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~d~G~ 738 (813)
|.. + .|+.++|.|.+.|.|+|. |+|+|+|..+.. ...|.|.++..+|+|.
T Consensus 291 V~~------v---------------~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~-------~~~l~i~~v~~~d~G~ 342 (363)
T 1wio_A 291 VMR------A---------------TQLQKNLTCEVWGPTSPKLMLSLKLENKEAKV-------SKREKAVWVLNPEAGM 342 (363)
T ss_dssp EEE------E---------------CCCSSSEEEEEESSCCTTCCEEEECSSSSCSE-------EESSSEEEESSCCSEE
T ss_pred EEE------e---------------cCCCeeEEEEEccccCCCccEEEEeCCCceee-------eeeeeeeeecccccee
Confidence 651 1 188899999999999998 999999998864 3457889999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEE
Q psy14896 739 YICRASNDRSALESSVTISIQ 759 (813)
Q Consensus 739 Y~C~a~N~~G~~~~~~~l~V~ 759 (813)
|+|.|.|. |....+..|.|.
T Consensus 343 Y~C~a~~~-~~~~~~~~~~V~ 362 (363)
T 1wio_A 343 WQCLLSDS-GQVLLESNIKVL 362 (363)
T ss_dssp EEEEECSS-SSCCEEEEEEEC
T ss_pred EEEEEecC-CeEEEecceEec
Confidence 99999975 677777777763
No 34
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=4.9e-36 Score=318.96 Aligned_cols=286 Identities=15% Similarity=0.112 Sum_probs=219.6
Q ss_pred ccccCeEEEEEeeccCCCcEEEeeccccccce-ec---cccCCCCCceEEee-------CCeEEEeCCCCCCCCceEEEE
Q psy14896 480 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRL-VA---NLIDPLSDKRFTLS-------GGNLIINDPRQVEDRGSYHCK 548 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~-~~---~~~~~~~~~~~~~~-------~~~l~i~~~~~~~d~G~Y~C~ 548 (813)
.+|+.++|.|.+.+.|.+.|.|+|++..+-.. .. .........++.+. +.+|.|.++ ..+|+|.|+|.
T Consensus 7 ~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v-~~~D~G~Y~C~ 85 (363)
T 1wio_A 7 KKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNL-KIEDSDTYICE 85 (363)
T ss_dssp ETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSC-CGGGCEEEEEE
T ss_pred eCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCC-CHHHCEEEEEE
Confidence 68999999999999999999999998531100 00 00011223444432 457999997 99999999999
Q ss_pred EEcCceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEE
Q psy14896 549 ASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYF 628 (813)
Q Consensus 549 a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i 628 (813)
|.|..+ .+.|.|...+ . .....+.+|+.++|.|.+ .+.|.+.|+|+|++... ...+++|.|
T Consensus 86 ~~n~~~-----~~~l~V~~~~---~-~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~---------~~~~~~L~i 146 (363)
T 1wio_A 86 VEDQKE-----EVQLLVFGLT---A-NSDTHLLQGQSLTLTLES-PPGSSPSVQCRSPRGKN---------IQGGKTLSV 146 (363)
T ss_dssp ETTEEE-----EEEEEEEEEE---E-SSCSSEESBSCEEEEEEC-CTTCCCCEEEECSSSCE---------EEESSEEEE
T ss_pred EEECCC-----cEEEEEEeCC---C-CCceEEecCCCEEEEEEc-CCCCCCeEEEEcCCCcc---------cccceEEEE
Confidence 999754 3555555422 1 122456889999999999 67899999999998541 335678999
Q ss_pred EeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecC-----CCCCe
Q psy14896 629 SALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG-----YPVPS 703 (813)
Q Consensus 629 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g-----~P~p~ 703 (813)
.+++.+|+|.|+|.|.|..+... ..+.|.|...|... ....+.+|+.++|.|.+.| .|.|.
T Consensus 147 ~~v~~~d~G~Y~C~a~~~~~~~~---~~~~l~v~~~p~~~-----------~~~~~~~G~~v~l~C~~~~~~~~~~P~p~ 212 (363)
T 1wio_A 147 SQLELQDSGTWTCTVLQNQKKVE---FKIDIVVLAFQKAS-----------SIVYKKEGEQVEFSFPLAFTVEKLTGSGE 212 (363)
T ss_dssp CSBCGGGCEECEEEEEETTEEEE---ECCEECEECCSCSE-----------EEEEEETBCCEEEECCCCCCCCSSCEEEE
T ss_pred eeCChhcCCEEEEEEecCCCeEE---EEEEEEEecCCCCC-----------CceEEecCCEEEEEEEEecccccCCCcee
Confidence 99999999999999998754432 23456666544321 2256789999999998887 88999
Q ss_pred EEEEeCCcccCC--------Cceeee------------c--ceEEEECCCCCCCCEEEEEEEEcC--CCceEEEEEEEEE
Q psy14896 704 YNWTRRGSPLPR--------NAYFEN------------F--NRILTIPNVKVEDQGEYICRASND--RSALESSVTISIQ 759 (813)
Q Consensus 704 i~W~k~g~~l~~--------~~~~~~------------~--~~~L~i~~v~~~d~G~Y~C~a~N~--~G~~~~~~~l~V~ 759 (813)
|+|+|+|..+.. +.++.. . ...|.|.+++.+|+|.|+|.|.|. .|..+..+.|.|.
T Consensus 213 i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~ 292 (363)
T 1wio_A 213 LWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM 292 (363)
T ss_dssp EEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEE
T ss_pred EEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEE
Confidence 999999998876 333211 2 348999999999999999999999 9999999999998
Q ss_pred cCCcccccCCceeecCCCeEEEEEEEcccCCce--EEEEECCEeccccccccccc
Q psy14896 760 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT--YSWFRNGELGHQMTDLLLKA 812 (813)
Q Consensus 760 ~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~--v~W~k~g~~l~~~~~~~i~~ 812 (813)
.. .|++++|.|.+.|.|+|. |.|+|||++|..+.++.|.+
T Consensus 293 ~v-------------~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~~~~l~i~~ 334 (363)
T 1wio_A 293 RA-------------TQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVW 334 (363)
T ss_dssp EE-------------CCCSSSEEEEEESSCCTTCCEEEECSSSSCSEEESSSEEE
T ss_pred Ee-------------cCCCeeEEEEEccccCCCccEEEEeCCCceeeeeeeeeee
Confidence 21 188999999999999998 99999999999888877754
No 35
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=3.4e-35 Score=321.57 Aligned_cols=378 Identities=18% Similarity=0.201 Sum_probs=235.4
Q ss_pred eeeCCCceeecCCCccccccEEEEeeeccCCC----CeEEEeecc--ccccccc--ccccccCCCccEEee----CCeEE
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPN----PSYEWFKED--YVQDRLV--ANLIDPLSDKRFTLS----GGNLI 259 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~----p~v~W~k~g--~~l~~~~--~~~~~~~~~~~~~~~----~~~l~ 259 (813)
|+..|.++.+.+| ++++|.|.+.+.|. +.|.|||++ ..+.... ..........++... ..+|.
T Consensus 4 v~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~ 78 (438)
T 1qgc_4 4 LTQSPASLAVSLG-----QRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLT 78 (438)
T ss_dssp EEEECSEEEECTT-----SCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEE
T ss_pred eEecCCeEEeeCC-----CCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEE
Confidence 5556778888777 67999999998876 489999984 3221000 000001123455433 23688
Q ss_pred EcCCccccCCeeEEEEeecCceeeEeeeeEEeeee---ecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEEeeccc
Q psy14896 260 INDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF---IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYF 335 (813)
Q Consensus 260 i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~---~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~k~~~ 335 (813)
|.+. +.+|+|.|+|.|.|..+...+..+.|.|.. +|.+.+.........|+.++|.|.+.++.|.+ +|+|+|||.
T Consensus 79 I~~v-~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~ 157 (438)
T 1qgc_4 79 IDPV-EADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGS 157 (438)
T ss_dssp ESSC-CGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred eCCC-cCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCE
Confidence 8885 899999999999998875445556666643 33333333333444677889999975557877 999999998
Q ss_pred cccccCCc--cEEEcc------CccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCC
Q psy14896 336 PNFVEEDK--RVFVSY------DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF 407 (813)
Q Consensus 336 ~~~~~~~~--~~~~~~------~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~ 407 (813)
++...... +..... .+.|.|.++..+|+|.|+|.|.|..+.. .+.+.+........+..| .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~-----~~~~~~~~~~~~~~~~~~------~ 226 (438)
T 1qgc_4 158 ERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS-----PIVKSFNRNECEVMLVES------G 226 (438)
T ss_dssp EECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS-----CEEEEEETTC-CCEEEEE------C
T ss_pred EcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCC-----ceecccccccceeEEecC------C
Confidence 74322000 111111 2369999999999999999999987642 234444322111111111 2
Q ss_pred CcCCCCCCcEEEEEEEeecC--CCeeeEeec--CCcCCCCceeccccceEEEcccccccceEEeCCCceEeccccccccc
Q psy14896 408 PEAPKAGDKVRLECVAFGYP--VPSYNWTRR--GSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILN 483 (813)
Q Consensus 408 ~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~--~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~ 483 (813)
...+.+|+.+.|.|.+.|.| .+.+.|+|+ +..+..-..+...
T Consensus 227 ~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~---------------------------------- 272 (438)
T 1qgc_4 227 GGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSG---------------------------------- 272 (438)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTT----------------------------------
T ss_pred ceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeec----------------------------------
Confidence 34689999999999999988 679999997 4332100000000
Q ss_pred CeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEee------CCeEEEeCCCCCCCCceEEEEEEcCcee--
Q psy14896 484 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS------GGNLIINDPRQVEDRGSYHCKASNKFGS-- 555 (813)
Q Consensus 484 ~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~i~~~~~~~d~G~Y~C~a~n~~g~-- 555 (813)
++.. ........++.+. ..+|.|.++ +.+|+|.|+|.|.|..+.
T Consensus 273 --------------------~~~~-------~~~~~~~~r~~~~~~~~~~~~~L~I~~v-~~~D~G~Y~C~a~n~~~~~~ 324 (438)
T 1qgc_4 273 --------------------GTYT-------YYPDSVKGRFTISRDNAKNTLYLQMSSL-RSADTAMYYCVRREDGGDEG 324 (438)
T ss_dssp --------------------SCCE-------ECCGGGTTTEEEEEETTTTEEEEEECSC-CGGGCCEEEEEECCSSSCCC
T ss_pred --------------------CCce-------ecCcccCCcEEEEeecCCCeEEEEECCC-ChhhCEEEEEEEEccCCCcc
Confidence 0000 0000011222221 237999997 999999999999985441
Q ss_pred --EEeecEEEEEee----cccccccCCCceeccCCCceEEeCCCCCC-Ccc-EEEEccCCCCCcccCCCeEEEe----eC
Q psy14896 556 --IISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNY-PGV-NYYWARDYFPNFVEEDKRVFVS----YD 623 (813)
Q Consensus 556 --~~s~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-p~~-~v~W~k~~~~~~~~~~~~~~~~----~~ 623 (813)
.....+.+.|.. +|.+........+..|+.++|.|.+ .|. |.+ .|+|+|+|.++........... ..
T Consensus 325 ~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~-~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~g~~~~~ 403 (438)
T 1qgc_4 325 FAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLV-KGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLS 403 (438)
T ss_dssp CCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEE-ESCBSSCCEEEEGGGTCCSSEEECCCEEETTEEEEE
T ss_pred ceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEe-ccccCCCcEEEEecCCCCCceeecCccccCCcEEEE
Confidence 112335666652 3333333334456679999999999 565 877 9999999987432211222111 11
Q ss_pred ccEEEEeecccCCeeEEEEEEeeecCc
Q psy14896 624 GALYFSALEQIDAGNYSCNVQSKVSDT 650 (813)
Q Consensus 624 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 650 (813)
..|.|.++..+| |.|+|.|.|..|..
T Consensus 404 s~L~i~~~~~~d-g~Y~C~a~n~~g~~ 429 (438)
T 1qgc_4 404 SSVTVPSSTWPS-ETVTCNVAHPASST 429 (438)
T ss_dssp EEEEEEEEHHHH-SCCEEEEEEGGGTE
T ss_pred EEEEEehhhcCC-ceEEEEEEeCCCCc
Confidence 258999999999 99999999999863
No 36
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=3.5e-34 Score=293.66 Aligned_cols=258 Identities=26% Similarity=0.351 Sum_probs=205.5
Q ss_pred ccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEee--CCeEEEeCCCCCCCCceEEEEEEcCceeEE
Q psy14896 480 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIINDPRQVEDRGSYHCKASNKFGSII 557 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~ 557 (813)
.+|+.++|.|.+.|.|.+.|.|+|+|..+. .....+.... ..+|.|.++ ..+|+|.|+|.|.|..|..
T Consensus 18 ~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~--------~~~~~~~~~~~~~~~L~i~~v-~~~d~G~Y~C~~~n~~g~~- 87 (284)
T 2rik_A 18 ALGESGTFKCHVTGTAPIKITWAKDNREIR--------PGGNYKMTLVENTATLTVLKV-TKGDAGQYTCYASNVAGKD- 87 (284)
T ss_dssp ETTCCEEEEEEEESSSCCEEEEEETTEECC--------SSSSEEEEEETTEEEEEESSC-CGGGCEEEEEEEEETTEEE-
T ss_pred cCCCcEEEEEEEEcCCCCEEEEEECCEECc--------CCCcEEEEEcCCEEEEEEecC-CcccCEEEEEEEEECCceE-
Confidence 789999999999999999999999996542 1222222222 358999997 9999999999999998886
Q ss_pred eecEEEEEeecccccccCC-CceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEe-eCccEEEEeecccC
Q psy14896 558 SESVQLAFGFIGEFNLKRA-PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS-YDGALYFSALEQID 635 (813)
Q Consensus 558 s~~~~l~v~~~p~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~-~~~~L~i~~~~~~d 635 (813)
+..+.|.|..+|.+..... ...+.+|+.++|.|.+ .+.|.+.+.|+|++.++......+.... ..+.|.|.+++.+|
T Consensus 88 ~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 166 (284)
T 2rik_A 88 SCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKI-GGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVED 166 (284)
T ss_dssp EEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEE-ESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGG
T ss_pred EEEEEEEccCCCcccccCCCceEecCCceEEEEEEE-eeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCccc
Confidence 5568888988887655443 3457889999999999 7889999999999976433322222222 23469999999999
Q ss_pred CeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCC
Q psy14896 636 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR 715 (813)
Q Consensus 636 ~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~ 715 (813)
+|.|+|.|.|..|... ..+.|.|..+|.+.. .+....+.+|++++|.|.+.|.|.|.|+|+|+|..+..
T Consensus 167 ~G~Y~C~a~n~~g~~~---~~~~l~V~~~p~~~~--------~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~ 235 (284)
T 2rik_A 167 SGDYTCEAHNAAGSAS---SSTSLKVKEPPVFRK--------KPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRS 235 (284)
T ss_dssp CEEEEEEEECSSCEEE---EEEEEEEECCCBCCS--------CCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECB
T ss_pred CEEEEEEEEcCCCcee---EEEEEEEecCCccee--------CCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcC
Confidence 9999999999987643 347888888776543 12235678999999999999999999999999999887
Q ss_pred Cceee----ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEE
Q psy14896 716 NAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 759 (813)
Q Consensus 716 ~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 759 (813)
+.++. .....|.|.+++.+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 236 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 236 GKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp TTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 65432 223689999999999999999999999999999999986
No 37
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-34 Score=298.60 Aligned_cols=264 Identities=21% Similarity=0.375 Sum_probs=194.3
Q ss_pred ccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEe---eC---CeEEEeCCCCC-CCCceEEEEEEcC
Q psy14896 480 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL---SG---GNLIINDPRQV-EDRGSYHCKASNK 552 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~---~~---~~l~i~~~~~~-~d~G~Y~C~a~n~ 552 (813)
.+|+.++|.|.+.|.|.+.|.|+|+|..+. ..++.. .+ ..|.|.++ .. +|+|.|+|.|.|.
T Consensus 19 ~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~-----------~~~~~~~~~~~~~~~~L~i~~~-~~~~D~G~Y~C~a~n~ 86 (304)
T 2yd9_A 19 VSGGVASFVCQATGDPKPRVTWNKKGKKVN-----------SQRFETIEFDESAGAVLRIQPL-RTPRDENVYECVAQNS 86 (304)
T ss_dssp ETTSCEEEEEEEECSSCCEEEEC------------------CTTEEEEEETTTTEEEEEECSC-CTTTTCSEEEEEEECS
T ss_pred cCCCeEEEEEEEEEeCCCeEEEEECCEECC-----------CCceEEEEecCCCceEEEEecc-cccCCCeEEEEEEECC
Confidence 789999999999999999999999996541 112221 22 47999997 76 9999999999999
Q ss_pred ceeEEeecEEEEEeec-------ccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCccc-CCCeEEEeeCc
Q psy14896 553 FGSIISESVQLAFGFI-------GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE-EDKRVFVSYDG 624 (813)
Q Consensus 553 ~g~~~s~~~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~-~~~~~~~~~~~ 624 (813)
.|.. +..+.|.|..+ |.+...+....+..|+.++|.|.+ .|.|.+.|+|+|++.++... ...++....++
T Consensus 87 ~g~~-~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~-~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~ 164 (304)
T 2yd9_A 87 VGEI-TVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAA-SGNPDPEITWFKDFLPVDPSASNGRIKQLRSG 164 (304)
T ss_dssp SCEE-CCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEE-ECSSCCEEEEEETTEECCGGGGTTSEEECTTS
T ss_pred CCeE-EEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEEC-ccCCCCeEEEEECCEECcCCCCcceEEeCCCe
Confidence 9884 55678888765 334444555667889999999999 78999999999999765432 22356667788
Q ss_pred cEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEc-cCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCe
Q psy14896 625 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF-PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS 703 (813)
Q Consensus 625 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~-~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~ 703 (813)
+|.|.+++.+|+|.|+|.|.|..|........+.+.+. .+|.+.. .+....+.+|++++|.|.+.|.|.|.
T Consensus 165 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~--------~~~~~~v~~G~~v~l~C~~~g~p~p~ 236 (304)
T 2yd9_A 165 ALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSI--------LPMSHEIMPGGNVNITCVAVGSPMPY 236 (304)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEE--------CCCCBCCCTTCCEEEEEEEEEESCCE
T ss_pred EEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEe--------cCCceEEcCCCeEEEEEEEeeeCCCE
Confidence 99999999999999999999998865443233333332 2333221 12225688999999999999999999
Q ss_pred EEEEeCCcccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCccccc
Q psy14896 704 YNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIP 767 (813)
Q Consensus 704 i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~~~~ 767 (813)
|+|+|+|..|.....+......|.|.++ +|+|.|+|.|.|..|..+.++.|.|..+|.+...
T Consensus 237 v~W~~~~~~l~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~~~ 298 (304)
T 2yd9_A 237 VKWMQGAEDLTPEDDMPVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLPKAGTK 298 (304)
T ss_dssp EEEEETTEECSCSSSCCBSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC----------
T ss_pred EEEEECCEECCCcccccCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCcccccc
Confidence 9999999999877665555567888876 6999999999999999999999999998877543
No 38
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=1.5e-34 Score=297.69 Aligned_cols=263 Identities=21% Similarity=0.367 Sum_probs=213.0
Q ss_pred ccccCeEEEEEeeccC-CCcEEEee-ccccccceeccccCCCCCceEEe-----eCCeEEEeCCCCCCCCceEEEEEEcC
Q psy14896 480 SILNDITLSCYAGGYP-NPSYEWFK-EDYVQDRLVANLIDPLSDKRFTL-----SGGNLIINDPRQVEDRGSYHCKASNK 552 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p-~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~i~~~~~~~d~G~Y~C~a~n~ 552 (813)
.+|+.+.|.|.+.+.| .+.|.|+| +|..+. . ...++.+ ..++|.|.++ ..+|+|.|+|.|.|.
T Consensus 15 ~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~--------~-~~~~~~~~~~~~~~~~L~i~~~-~~~D~G~Y~C~~~n~ 84 (291)
T 1qz1_A 15 SVGESKFFLCQVAGDAKDKDISWFSPNGEKLS--------P-NQQRISVVWNDDDSSTLTIYNA-NIDDAGIYKCVVTAE 84 (291)
T ss_dssp ETTCCEEEEEEESSCCSCCEEEEECTTSCBCC--------S-SCSSEEEEEEETTEEEEEECSC-CGGGCEEEEEEEECT
T ss_pred eCCCeEEEEEEeCCCCCCcEeEEECCCCeECc--------c-CCceEEEEEcCCCeEEEEEecC-CCCCCEEEEEEEEcC
Confidence 7899999999999987 68999999 775432 1 1223322 2358999997 999999999999999
Q ss_pred ceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeec
Q psy14896 553 FGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALE 632 (813)
Q Consensus 553 ~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~ 632 (813)
.|...+..+.|.|..+|.+...+.+..+.+|+.++|.|.+ .+.|.+.+.|+|++.++......++....+++|.|.++.
T Consensus 85 ~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 163 (291)
T 1qz1_A 85 DGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDV-VSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIK 163 (291)
T ss_dssp TSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEE-ECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCC
T ss_pred CCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEe-ccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCc
Confidence 8776667788888888877777777788999999999999 688999999999998866666677888888899999999
Q ss_pred ccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcc
Q psy14896 633 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSP 712 (813)
Q Consensus 633 ~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~ 712 (813)
.+|+|.|+|.|.|..+... ....+.|.|..+|.+.... ......+.+|+.++|.|.+.|.|.|.|+|+|+|..
T Consensus 164 ~~d~G~Y~C~a~n~~~~~~-~~~~~~l~v~~~p~~~~~~------~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~ 236 (291)
T 1qz1_A 164 KTDEGTYRCEGRILARGEI-NFKDIQVIVNVPPTVQARQ------SIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEP 236 (291)
T ss_dssp GGGCEEEEEEEEEGGGTEE-EEEEEEEEEEEEEEEEESC------SEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEE
T ss_pred cccCeEEEEEEEecCCCce-eeEEEEEEEecCCcccccc------cccccccccCceEEEEEEEEEeCCCcEEEEECCEE
Confidence 9999999999999775422 2234667777776554321 11224678999999999999999999999999999
Q ss_pred cCCCc----ee--eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEc
Q psy14896 713 LPRNA----YF--ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 760 (813)
Q Consensus 713 l~~~~----~~--~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 760 (813)
+..+. ++ ......|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 237 IENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp CCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 87654 22 23356899999999999999999999999999999999975
No 39
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=1e-35 Score=325.77 Aligned_cols=366 Identities=16% Similarity=0.204 Sum_probs=237.5
Q ss_pred CCceeecCCCeEEEecCCCCCCc----ceEEEeecc--cccc----------ccCCccEEEccC---ccEEEeeeeecCC
Q psy14896 303 APEIGNQNWGKAMFCDPPTNYPG----VNYYWARDY--FPNF----------VEEDKRVFVSYD---GALYFSALEQIDA 363 (813)
Q Consensus 303 ~~~~~~~~~~~~l~C~~~~~~p~----~~v~W~k~~--~~~~----------~~~~~~~~~~~~---~~L~i~~v~~~D~ 363 (813)
....+.+|+.++|.|.+ .+.|. +.+.|+|++ ..+. .....|+.+..+ .+|.|.+++.+|+
T Consensus 9 ~~~~v~~G~~v~L~C~~-~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (438)
T 1qgc_4 9 ASLAVSLGQRATISCRA-SESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADDV 87 (438)
T ss_dssp SEEEECTTSCEEEEEEE-SSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEeeCCCCEEEEEec-CCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcCC
Confidence 44567889999999995 56665 599999974 3211 012345554432 3799999999999
Q ss_pred eeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEee-cCCC-eeeEeecCCcCC
Q psy14896 364 GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG-YPVP-SYNWTRRGSPLP 441 (813)
Q Consensus 364 G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g-~p~p-~i~W~~~~~~l~ 441 (813)
|.|+|.|.|..+.. .+..+.|.|........+.. ......+.+|+.+.|.|.+.| .|.| .|+|+|+|.++.
T Consensus 88 G~Y~C~a~n~~~~~--~~~~~~l~V~~~~~~P~v~~-----~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~ 160 (438)
T 1qgc_4 88 ATYYCQQSNEVPLT--FGAGTKLDLKRADAAPTVSI-----FPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ 160 (438)
T ss_dssp EEEEEEECSSTTCC--BCCCEEEEECCCCBCCEEEE-----ECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred eeEEEEEecCCCcc--ccCceeEEecCCCCCCEEEe-----cCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcC
Confidence 99999999977532 23346777753211111110 001112346788999999877 6777 889998887764
Q ss_pred CCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCC
Q psy14896 442 RNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 521 (813)
Q Consensus 442 ~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~ 521 (813)
...... . .......
T Consensus 161 ~~~~~~------------------------------------------------------~------------~~~~~~~ 174 (438)
T 1qgc_4 161 NGVLNS------------------------------------------------------W------------TDQDSKD 174 (438)
T ss_dssp TTEEEE------------------------------------------------------E------------ECCCTTT
T ss_pred CCceec------------------------------------------------------c------------ccccCCC
Confidence 331000 0 0000111
Q ss_pred ceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEe--ecccccccCCCceeccCCCceEEeCCCCCCC--
Q psy14896 522 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG--FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP-- 597 (813)
Q Consensus 522 ~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~--~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-- 597 (813)
..+. ..+.|.|.++ ..+|+|.|+|.|.|..|.. .+.+.+. .++.....+....+.+|+.++|.|.+ .|.|
T Consensus 175 ~~~~-~~~~L~i~~~-~~~d~G~Y~C~a~n~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~g~p~~ 248 (438)
T 1qgc_4 175 STYS-MSSTLTLTKD-EYERHNSYTCEATHKTSTS---PIVKSFNRNECEVMLVESGGGLVKPGGSLKLSCTA-SGFIFN 248 (438)
T ss_dssp CCEE-EEEEEEEEHH-HHHTCCEEEEEEEETTCSS---CEEEEEETTC-CCEEEEECCEEECTTCCEEEEEEE-ESSCGG
T ss_pred CcEE-EEEEEEEeCc-ccCCCCeEEEEEEecccCC---ceecccccccceeEEecCCceEEecCCcEEEEEEE-cccccC
Confidence 1221 2457899986 8899999999999987763 1223332 12222223445668899999999999 6777
Q ss_pred ccEEEEccC--CCCCcc---------------cCCCeEEEeeC-----ccEEEEeecccCCeeEEEEEEeeecC--cccc
Q psy14896 598 GVNYYWARD--YFPNFV---------------EEDKRVFVSYD-----GALYFSALEQIDAGNYSCNVQSKVSD--TGRN 653 (813)
Q Consensus 598 ~~~v~W~k~--~~~~~~---------------~~~~~~~~~~~-----~~L~i~~~~~~d~G~Y~C~a~n~~g~--~~~~ 653 (813)
.+.|.|+|+ +..... ....++.+..+ .+|.|.+++.+|+|.|+|.|.|..+. ....
T Consensus 249 ~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~ 328 (438)
T 1qgc_4 249 RCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYW 328 (438)
T ss_dssp GSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSB
T ss_pred CcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceee
Confidence 679999997 432110 12345655543 26999999999999999999995541 1111
Q ss_pred CceeeEEEccC----CCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CCC-eEEEEeCCcccCCCc--ee-ee---
Q psy14896 654 GPFFPLKVFPH----SNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVP-SYNWTRRGSPLPRNA--YF-EN--- 721 (813)
Q Consensus 654 ~~~~~l~v~~~----p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~p-~i~W~k~g~~l~~~~--~~-~~--- 721 (813)
.....|.|... |.+.. .+ ....+.+|+.++|.|.+.|. |.| .|+|+|+|..+.... .. ..
T Consensus 329 ~~~~~l~V~~~~~~~P~v~~--~~------~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~g~~ 400 (438)
T 1qgc_4 329 GQGTVVTVSAAKTTPPSVYP--LA------PGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLY 400 (438)
T ss_dssp CCCEEEEECSSCCBCCEEEE--EC------CCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEECCCEEETTEE
T ss_pred CCCEEEEEecCCCCCCeEEE--cC------cccccccCCcEEEEEEeccccCCCcEEEEecCCCCCceeecCccccCCcE
Confidence 12356777642 22111 11 11346789999999999997 888 999999998875321 11 11
Q ss_pred -cceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEE
Q psy14896 722 -FNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 757 (813)
Q Consensus 722 -~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 757 (813)
..+.|+|.++..+| |.|+|.|.|..|.......|.
T Consensus 401 ~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i~ 436 (438)
T 1qgc_4 401 TLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 436 (438)
T ss_dssp EEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEECC
T ss_pred EEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeecC
Confidence 12469999999889 999999999999877666554
No 40
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=7.5e-34 Score=292.36 Aligned_cols=263 Identities=22% Similarity=0.359 Sum_probs=208.6
Q ss_pred ccccCeEEEEEeeccCCCcEEEee-ccccccceeccccCCCCCceEEe--eC--CeEEEeCCCCCCCCceEEEEEEcCce
Q psy14896 480 SILNDITLSCYAGGYPNPSYEWFK-EDYVQDRLVANLIDPLSDKRFTL--SG--GNLIINDPRQVEDRGSYHCKASNKFG 554 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~--~~--~~l~i~~~~~~~d~G~Y~C~a~n~~g 554 (813)
.+|+.++|.|.+.|.|. .+.|+| +|..+. ...++.+ .+ .+|.|.++ ..+|+|.|+|.|.|..|
T Consensus 17 ~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~----------~~~~~~~~~~~~~~~L~i~~~-~~~D~G~Y~C~~~n~~g 84 (291)
T 2wim_A 17 SVGESKFFTCTAIGEPE-SIDWYNPQGEKII----------STQRVVVQKEGVRSRLTIYNA-NIEDAGIYRCQATDAKG 84 (291)
T ss_dssp ETTCCEEEEEEEESCCS-EEECBCTTCCBCC----------CBTTEEEEEETTEEEEEECSC-CGGGCEEEEEEEECSSS
T ss_pred cCCCcEEEEEEEeCCCC-ceEEECCCCcCcc----------CCCcEEEecCCCEEEEEEccC-CcccCEEEEEEEecccC
Confidence 78999999999999885 899999 664321 1223322 22 37999997 99999999999999988
Q ss_pred eEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeeccc
Q psy14896 555 SIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQI 634 (813)
Q Consensus 555 ~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 634 (813)
...+..+.|.|..+|.+.....+..+.+|+.++|.|.+ .+.|.+.+.|++++.++......++....+++|.|.++..+
T Consensus 85 ~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 163 (291)
T 2wim_A 85 QTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKS 163 (291)
T ss_dssp CEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCC-BCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGG
T ss_pred ceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEE-ccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecchh
Confidence 87666788888888877777777788999999999999 78899999999999876555667888888899999999999
Q ss_pred CCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccC
Q psy14896 635 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLP 714 (813)
Q Consensus 635 d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~ 714 (813)
|+|.|+|.|.|..+... ....+.+.|..+|.+... .......+.+|+.++|.|.+.|.|.|.|+|+|+|..+.
T Consensus 164 d~G~Y~C~~~n~~~~~~-~~~~~~~~v~~~p~~~~~------~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~ 236 (291)
T 2wim_A 164 DEGIYRCEGRVEARGEI-DFRDIIVIVNVPPAISMP------QKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIE 236 (291)
T ss_dssp GCEEEEEEEEETTTTEE-EEEEEEEEEEBCCCCBCS------CSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECC
T ss_pred hCEEEEEEEEECCCCee-EEeeEEEEeccCCccccC------cccccceecCCCeEEEEEEeecCCCCeEEEEECCEECc
Confidence 99999999999875422 223456777777754321 11113567899999999999999999999999999987
Q ss_pred CCcee--eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCC
Q psy14896 715 RNAYF--ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 762 (813)
Q Consensus 715 ~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 762 (813)
.+.++ ......|.|.++..+|+|.|+|.|.|..|..++++.|.|..+|
T Consensus 237 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 237 ENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQH 286 (291)
T ss_dssp CTTTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC----
T ss_pred CCccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEec
Confidence 76544 2345789999999999999999999999999999999999775
No 41
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=1.3e-32 Score=282.97 Aligned_cols=279 Identities=19% Similarity=0.318 Sum_probs=210.4
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCC-CCeEEEee-cccccccccccccccCCCccEEe-----eCCeEEEc
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYP-NPSYEWFK-EDYVQDRLVANLIDPLSDKRFTL-----SGGNLIIN 261 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P-~p~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~-----~~~~l~i~ 261 (813)
||.|...|.+..+.+| ++++|.|.+.|.| .+.|.|+| +|..+. ....++.. .+++|.|.
T Consensus 2 ~~~v~~~p~~~~v~~G-----~~v~l~C~~~~~~~~~~i~W~~~~g~~~~---------~~~~~~~~~~~~~~~~~L~i~ 67 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVG-----ESKFFLCQVAGDAKDKDISWFSPNGEKLS---------PNQQRISVVWNDDDSSTLTIY 67 (291)
T ss_dssp CCCEEEESSSEEEETT-----CCEEEEEEESSCCSCCEEEEECTTSCBCC---------SSCSSEEEEEEETTEEEEEEC
T ss_pred CcceEecCCCceEeCC-----CeEEEEEEeCCCCCCcEeEEECCCCeECc---------cCCceEEEEEcCCCeEEEEEe
Confidence 5788889999988887 6699999999876 68999999 776552 12233332 13467887
Q ss_pred CCccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccC
Q psy14896 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE 341 (813)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~ 341 (813)
+. +.+|+|.|+|.|.|..|...+..+.|.|..+|.+...+.+..+.+|+.+.|.|.+ .+.|.+.+.|++++.++....
T Consensus 68 ~~-~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~ 145 (291)
T 1qz1_A 68 NA-NIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDV-VSSLPPTIIWKHKGRDVILKK 145 (291)
T ss_dssp SC-CGGGCEEEEEEEECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEE-ECSSCCEEEEEETTSCSSTTC
T ss_pred cC-CCCCCEEEEEEEEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEe-ccCCCCEEEEEECCEEcccCC
Confidence 75 8999999999999998766677888888877777777778889999999999996 577999999999999876667
Q ss_pred CccEEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEE
Q psy14896 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC 421 (813)
Q Consensus 342 ~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C 421 (813)
..++....++.|.|.++..+|+|.|+|.|.|..+... ....+.|.|..+|.+..... .....+.+|+.+.|.|
T Consensus 146 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~-~~~~~~l~v~~~p~~~~~~~------~~~~~~~~g~~v~l~C 218 (291)
T 1qz1_A 146 DVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEI-NFKDIQVIVNVPPTVQARQS------IVNATANLGQSVTLVC 218 (291)
T ss_dssp CTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEE-EEEEEEEEEEEEEEEEESCS------EEEEETTSCCCEEEEE
T ss_pred CceEEEccCCcEEEccCccccCeEEEEEEEecCCCce-eeEEEEEEEecCCccccccc------ccccccccCceEEEEE
Confidence 7788888888999999999999999999999764322 22345666665544322111 1123577888888888
Q ss_pred EEeecCCCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEE
Q psy14896 422 VAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEW 501 (813)
Q Consensus 422 ~~~g~p~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W 501 (813)
.+.|+|.|.+.|++++..+.....
T Consensus 219 ~~~g~p~p~i~W~~~g~~~~~~~~-------------------------------------------------------- 242 (291)
T 1qz1_A 219 DADGFPEPTMSWTKDGEPIENEEE-------------------------------------------------------- 242 (291)
T ss_dssp EEEEESCCEEEEEETTEECCCC----------------------------------------------------------
T ss_pred EEEEeCCCcEEEEECCEECcCCCC--------------------------------------------------------
Confidence 888888888888888776643210
Q ss_pred eeccccccceeccccCCCCCceEEe--eCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEe
Q psy14896 502 FKEDYVQDRLVANLIDPLSDKRFTL--SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG 566 (813)
Q Consensus 502 ~k~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~ 566 (813)
...++.. .+..|.|.++ ..+|+|.|+|.|.|..|.. +..+.|.|.
T Consensus 243 ------------------~~~~~~~~~~~~~L~i~~v-~~~d~G~Y~C~a~N~~G~~-~~~~~l~V~ 289 (291)
T 1qz1_A 243 ------------------DDEKHIFSDDSSELTIRNV-DKNDEAEYVCIAENKAGEQ-DASIHLKVF 289 (291)
T ss_dssp ------------------CCSSEEECTTSCEEEECSC-CGGGCEEEEEEEEETTEEE-EEEEEEEEE
T ss_pred ------------------CCcceEEcCCCcEEEEEec-ChhcCEEEEEEEEeCCCce-EEEEEEEEE
Confidence 0011211 2357999997 8999999999999999986 445677664
No 42
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=4.8e-32 Score=277.70 Aligned_cols=274 Identities=24% Similarity=0.327 Sum_probs=202.7
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEee--CCeEEEcCCcc
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIINDPRQ 265 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~ 265 (813)
.||.|...|.+..+.+| ++++|.|.+.|.|.+.|.|+|+|..+.. ....+.... +++|.|.+. +
T Consensus 4 ~pP~~~~~p~~~~~~~G-----~~v~l~C~~~g~p~~~v~W~~~~~~~~~--------~~~~~~~~~~~~~~L~i~~v-~ 69 (284)
T 2rik_A 4 APPFFDLKPVSVDLALG-----ESGTFKCHVTGTAPIKITWAKDNREIRP--------GGNYKMTLVENTATLTVLKV-T 69 (284)
T ss_dssp CCCEEEECCCCEEEETT-----CCEEEEEEEESSSCCEEEEEETTEECCS--------SSSEEEEEETTEEEEEESSC-C
T ss_pred CCCEEEccccceEecCC-----CcEEEEEEEEcCCCCEEEEEECCEECcC--------CCcEEEEEcCCEEEEEEecC-C
Confidence 47899999999988887 6699999999999999999999987632 111122222 356788775 8
Q ss_pred ccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCC-CceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCcc
Q psy14896 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA-PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKR 344 (813)
Q Consensus 266 ~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~-~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~ 344 (813)
.+|+|.|+|.|.|..|.. +..+.|.|..+|.+..... ...+.+|+.+.|.|.+ .|.|.+.+.|+|++.++......+
T Consensus 70 ~~d~G~Y~C~~~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~ 147 (284)
T 2rik_A 70 KGDAGQYTCYASNVAGKD-SCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKI-GGSPEIKVLWYKDETEIQESSKFR 147 (284)
T ss_dssp GGGCEEEEEEEEETTEEE-EEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEE-ESSSCCEEEEEETTEECCCSSSEE
T ss_pred cccCEEEEEEEEECCceE-EEEEEEEccCCCcccccCCCceEecCCceEEEEEEE-eeeCCCEEEEEECCEECcCCCcEE
Confidence 999999999999999986 7788999988877665544 3457889999999996 678999999999998754333323
Q ss_pred EEEc-cCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEE
Q psy14896 345 VFVS-YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA 423 (813)
Q Consensus 345 ~~~~-~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~ 423 (813)
+... ..+.|.|.+++.+|+|.|+|.|.|..|... ..+.|.|..+|.+.. ......+.+|+.+.|.|.+
T Consensus 148 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~---~~~~l~V~~~p~~~~--------~~~~~~~~~g~~v~l~C~~ 216 (284)
T 2rik_A 148 MSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSAS---SSTSLKVKEPPVFRK--------KPHPVETLKGADVHLECEL 216 (284)
T ss_dssp EEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEE---EEEEEEEECCCBCCS--------CCCCEEECTTCCEEEEEEC
T ss_pred EEEcCCEEEEEECCCCcccCEEEEEEEEcCCCcee---EEEEEEEecCCccee--------CCCcceecCCCeEEEEEEE
Confidence 3222 234799999999999999999999887543 347788876654321 1223457788888888888
Q ss_pred eecCCCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEee
Q psy14896 424 FGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFK 503 (813)
Q Consensus 424 ~g~p~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k 503 (813)
.|+|.|.+.|++++..+.....+
T Consensus 217 ~g~p~~~v~W~~~~~~~~~~~~~--------------------------------------------------------- 239 (284)
T 2rik_A 217 QGTPPFQVSWHKDKRELRSGKKY--------------------------------------------------------- 239 (284)
T ss_dssp BSSSCCEEEEEETTEEECBTTTE---------------------------------------------------------
T ss_pred EecCCCEEEEEECCEECcCCCCE---------------------------------------------------------
Confidence 88888888888877665432110
Q ss_pred ccccccceeccccCCCCCceEEee--CCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEe
Q psy14896 504 EDYVQDRLVANLIDPLSDKRFTLS--GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG 566 (813)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~ 566 (813)
..... ...|.|.++ ..+|+|.|+|.|.|..|.... .+.|.|.
T Consensus 240 -------------------~~~~~~~~~~L~i~~v-~~~d~G~Y~C~a~N~~G~~~~-~~~l~V~ 283 (284)
T 2rik_A 240 -------------------KIMSENFLTSIHILNV-DSADIGEYQCKASNDVGSYTC-VGSITLK 283 (284)
T ss_dssp -------------------EEEEETTEEEEEECSC-CGGGCEEEEEEEEETTEEEEE-EEEEEEC
T ss_pred -------------------EEEEcCCEEEEEEcCC-CcccCEEEEEEEEeCCCceeE-EEEEEEc
Confidence 01111 147889997 899999999999999998744 3666653
No 43
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=100.00 E-value=4.5e-33 Score=289.58 Aligned_cols=279 Identities=19% Similarity=0.211 Sum_probs=203.4
Q ss_pred EeCCCceEecccccccccCeEEEEEeeccCCC-----cEEEeeccccccceecccc---CCCCCceEEe---------eC
Q psy14896 466 IKQPTDVVFDLSKRSILNDITLSCYAGGYPNP-----SYEWFKEDYVQDRLVANLI---DPLSDKRFTL---------SG 528 (813)
Q Consensus 466 ~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-----~v~W~k~~~~~~~~~~~~~---~~~~~~~~~~---------~~ 528 (813)
+..|..+.. ..|+.++|.|.+.+.|.+ .|.|+|++........... ......+... .+
T Consensus 4 v~~P~~v~~-----~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 78 (313)
T 4fqp_A 4 VQAPTQVPG-----FLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRN 78 (313)
T ss_dssp EECCSEECC-----BTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCB
T ss_pred EcCCCEEEE-----ecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccc
Confidence 344555444 789999999999987765 4899999865322111000 0011122221 23
Q ss_pred CeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCC
Q psy14896 529 GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYF 608 (813)
Q Consensus 529 ~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~ 608 (813)
.+|.|.++ +.+|+|.|+|.+.+..+...+..+.|.+..+|.+........+..++.+.|.|.+..+.|.+.+.|++++.
T Consensus 79 ~sL~I~~v-~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~ 157 (313)
T 4fqp_A 79 ASLRMFGL-RVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLG 157 (313)
T ss_dssp CCEEECSC-CGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTC
T ss_pred eEEEECcC-ChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCc
Confidence 57999997 99999999999876544444556778777777766665566667777888999886789999999999987
Q ss_pred CCcccCCCeEEEeeCc------cEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCc
Q psy14896 609 PNFVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 682 (813)
Q Consensus 609 ~~~~~~~~~~~~~~~~------~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~ 682 (813)
++ ....+.....++ .|.|..+..+|+|.|+|.|.|..+.... ...+.|.|.++|.+... .....
T Consensus 158 ~~--~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~-~~~~~l~V~~~P~v~~~-------~~~~~ 227 (313)
T 4fqp_A 158 GM--PNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQ-LLTVNLTVYYPPEVSIS-------GYDNN 227 (313)
T ss_dssp CE--EEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCE-EEEEECCBCEEEEEEEE-------CCCSC
T ss_pred cc--cccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccc-eeeeecccccCCccccc-------cccce
Confidence 53 222233333333 3888889999999999999998776433 23456677777754321 11124
Q ss_pred CCCCCCeEEEEEEecCCCCC-eEEEEeCCcccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcC
Q psy14896 683 APKAGDKVRLECVAFGYPVP-SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 761 (813)
Q Consensus 683 ~~~~G~~v~l~C~~~g~P~p-~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 761 (813)
.+.+|+.++|.|.+.|+|.| .|+|+|+|.+|....... +++|.|.+++.+|+|.|+|.|.|.+|..+.++.|.|..+
T Consensus 228 ~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 305 (313)
T 4fqp_A 228 WYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQ--GAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEG 305 (313)
T ss_dssp EETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEE--TTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECC
T ss_pred eecCCCeEEEEEEecCCCCCcEEEEEECCEECCCceEEe--CCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeC
Confidence 46789999999999999999 699999999997664333 568999999999999999999999999999999999965
Q ss_pred C
Q psy14896 762 P 762 (813)
Q Consensus 762 P 762 (813)
|
T Consensus 306 P 306 (313)
T 4fqp_A 306 P 306 (313)
T ss_dssp C
T ss_pred C
Confidence 4
No 44
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.4e-32 Score=280.21 Aligned_cols=232 Identities=22% Similarity=0.368 Sum_probs=168.4
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeC---CeEEEcCCc
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSG---GNLIINDPR 264 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~ 264 (813)
.||.|+..|.+..+.+| ++++|.|.+.|.|.|.|.|+|+|..+.. .........+ .+|.|.+.
T Consensus 5 ~~P~~~~~p~~~~v~~G-----~~v~l~C~~~g~p~~~i~W~k~g~~i~~--------~~~~~~~~~~~~~~~L~i~~~- 70 (304)
T 2yd9_A 5 EPPRFIKEPKDQIGVSG-----GVASFVCQATGDPKPRVTWNKKGKKVNS--------QRFETIEFDESAGAVLRIQPL- 70 (304)
T ss_dssp CCCEEEECCCCEEEETT-----SCEEEEEEEECSSCCEEEEC-------C--------TTEEEEEETTTTEEEEEECSC-
T ss_pred cCCeeeecCCceEecCC-----CeEEEEEEEEEeCCCeEEEEECCEECCC--------CceEEEEecCCCceEEEEecc-
Confidence 57999999999998887 6699999999999999999999986521 1111111123 35777775
Q ss_pred cc-cCCeeEEEEeecCceeeEeeeeEEeeeeec-------ccccCCCCceeecCCCeEEEecCCCCCCcceEEEeecccc
Q psy14896 265 QV-EDRGSYHCKASNKFGSIISESVQLAFGFIG-------EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFP 336 (813)
Q Consensus 265 ~~-~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~-------~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~ 336 (813)
+. +|+|.|+|.|.|..|.. +..+.|.|...+ .+...+....+.+|+.++|.|.+ .|.|.+.+.|+|++.+
T Consensus 71 ~~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~-~g~p~~~v~W~k~~~~ 148 (304)
T 2yd9_A 71 RTPRDENVYECVAQNSVGEI-TVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAA-SGNPDPEITWFKDFLP 148 (304)
T ss_dssp CTTTTCSEEEEEEECSSCEE-CCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEE-ECSSCCEEEEEETTEE
T ss_pred cccCCCeEEEEEEECCCCeE-EEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEEC-ccCCCCeEEEEECCEE
Confidence 76 99999999999999985 778888887653 33344555677889999999996 7889999999999987
Q ss_pred cccc-CCccEEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCC
Q psy14896 337 NFVE-EDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD 415 (813)
Q Consensus 337 ~~~~-~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~ 415 (813)
+... ...++....++.|.|.+++.+|+|.|+|.|.|..|..... .+.|.|........+.. ......+.+|+
T Consensus 149 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~--~~~l~v~~~~~~P~~~~-----~~~~~~v~~G~ 221 (304)
T 2yd9_A 149 VDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSS--PANLYVRVQNVAPRFSI-----LPMSHEIMPGG 221 (304)
T ss_dssp CCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECC--CEEEEEECCCEEEEEEE-----CCCCBCCCTTC
T ss_pred CcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEec--cEEEEEEeeccCCcEEe-----cCCceEEcCCC
Confidence 5433 2346667778899999999999999999999988754322 24555543211111111 11235689999
Q ss_pred cEEEEEEEeecCCCeeeEeecCCcCCC
Q psy14896 416 KVRLECVAFGYPVPSYNWTRRGSPLPR 442 (813)
Q Consensus 416 ~~~l~C~~~g~p~p~i~W~~~~~~l~~ 442 (813)
.+.|.|.+.|+|.|.|.|++++..+..
T Consensus 222 ~v~l~C~~~g~p~p~v~W~~~~~~l~~ 248 (304)
T 2yd9_A 222 NVNITCVAVGSPMPYVKWMQGAEDLTP 248 (304)
T ss_dssp CEEEEEEEEEESCCEEEEEETTEECSC
T ss_pred eEEEEEEEeeeCCCEEEEEECCEECCC
Confidence 999999999999999999999877643
No 45
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=9.5e-32 Score=276.61 Aligned_cols=278 Identities=21% Similarity=0.298 Sum_probs=206.0
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEee-cccccccccccccccCCCccEEee-C---CeEEEcCC
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFK-EDYVQDRLVANLIDPLSDKRFTLS-G---GNLIINDP 263 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~-~---~~l~i~~~ 263 (813)
+|.|+..|.+..+.+| ++++|.|.+.|.|. .|.|+| +|..+. .+.++.+. + .+|.|.+.
T Consensus 4 ~p~v~~~~~~~~v~~G-----~~v~l~C~~~~~p~-~v~W~~~~g~~~~----------~~~~~~~~~~~~~~~L~i~~~ 67 (291)
T 2wim_A 4 LLQVTISLSKVELSVG-----ESKFFTCTAIGEPE-SIDWYNPQGEKII----------STQRVVVQKEGVRSRLTIYNA 67 (291)
T ss_dssp CCEEEESCSEEEEETT-----CCEEEEEEEESCCS-EEECBCTTCCBCC----------CBTTEEEEEETTEEEEEECSC
T ss_pred CceEEEeccceEecCC-----CcEEEEEEEeCCCC-ceEEECCCCcCcc----------CCCcEEEecCCCEEEEEEccC
Confidence 5889999999998888 66999999999774 999999 665442 22333332 2 36778775
Q ss_pred ccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCc
Q psy14896 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343 (813)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~ 343 (813)
+.+|+|.|+|.|.|..|...+..+.|.|..++.+.....+..+.+|+.+.|.|.+ .+.|.+.+.|++++..+......
T Consensus 68 -~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~ 145 (291)
T 2wim_A 68 -NIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDN 145 (291)
T ss_dssp -CGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCC-BCSSCCEEEEECC----CBCCCS
T ss_pred -CcccCEEEEEEEecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEE-ccCCCCEEEEEECCccccccCCc
Confidence 8999999999999999987677888888887877777778889999999999996 67899999999999887665677
Q ss_pred cEEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEE
Q psy14896 344 RVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA 423 (813)
Q Consensus 344 ~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~ 423 (813)
++.+..++.|.|.++..+|+|.|+|.|.|..+... ....+.|.|..+|.+.... ......+.+|+.+.|.|.+
T Consensus 146 ~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~-~~~~~~~~v~~~p~~~~~~------~~~~~~~~~g~~~~l~C~~ 218 (291)
T 2wim_A 146 RFAMLANNNLQILNINKSDEGIYRCEGRVEARGEI-DFRDIIVIVNVPPAISMPQ------KSFNATAERGEEMTFSCRA 218 (291)
T ss_dssp SEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEE-EEEEEEEEEEBCCCCBCSC------SEEECCSSSCCEEEEECBC
T ss_pred eEEEccCCCEEEEecchhhCEEEEEEEEECCCCee-EEeeEEEEeccCCccccCc------ccccceecCCCeEEEEEEe
Confidence 88888889999999999999999999998764322 2223566666554322111 1113467888889999988
Q ss_pred eecCCCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEee
Q psy14896 424 FGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFK 503 (813)
Q Consensus 424 ~g~p~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k 503 (813)
.|+|.|.+.|++++..+.....+
T Consensus 219 ~g~p~p~v~W~~~g~~~~~~~~~--------------------------------------------------------- 241 (291)
T 2wim_A 219 SGSPEPAISWFRNGKLIEENEKY--------------------------------------------------------- 241 (291)
T ss_dssp CCBSCCEEEEEETTEECCCTTTE---------------------------------------------------------
T ss_pred ecCCCCeEEEEECCEECcCCccE---------------------------------------------------------
Confidence 88888888888887766432110
Q ss_pred ccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecc
Q psy14896 504 EDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG 569 (813)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p 569 (813)
.....+++|.|.++ ..+|+|.|+|.|.|..|...+. +.|.|..++
T Consensus 242 -------------------~~~~~~~~L~i~~~-~~~d~G~Y~C~a~N~~G~~~~~-~~l~v~~~~ 286 (291)
T 2wim_A 242 -------------------ILKGSNTELTVRNI-INSDGGPYVCRATNKAGEDEKQ-AFLQVFVQH 286 (291)
T ss_dssp -------------------EECSTTCEEEEESC-CSTTCEEEEEEEEETTEEEEEE-EEEEC----
T ss_pred -------------------EEcCCccEEEEeeC-CcccCEEEEEEEEECCCceeee-EEEEEEEec
Confidence 00112457999997 8999999999999999998544 666665443
No 46
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=1.5e-32 Score=286.58 Aligned_cols=266 Identities=15% Similarity=0.191 Sum_probs=193.3
Q ss_pred ccccCeEEEEEeecc-CCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEe
Q psy14896 480 SILNDITLSCYAGGY-PNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIIS 558 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~-p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s 558 (813)
.+|+.++|.|.+.+. |.+.|.|+|+|..+.. .....+.....+|.|.++ ..+|+|.|+|.|.|..|...
T Consensus 19 ~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~--------~~~~~~~~~~~~L~i~~~-~~~d~G~Y~C~~~n~~g~~~- 88 (317)
T 2y25_A 19 TGECNVLLKCKVANIKKETHIVWYKDEREISV--------DEKHDFKDGICTLLITEF-SKKDAGIYEVILKDDRGKDK- 88 (317)
T ss_dssp ETTTEEEEEEEEESCCTTCEEEEEETTEEECC--------SCC-----CCEEEEETTC-CSTTCSCEEEEEESSSCEEE-
T ss_pred CCCCeEEEEEEEcCCCCCCEEEEEECCeEcCC--------CCcEEEECCeEEEEEccC-CcccCeEEEEEEECCCCcEE-
Confidence 789999999999987 7899999999966421 111122223358999997 99999999999999988763
Q ss_pred ecEEEEEeecccccccCCCceeccCCCceEEeCCCCC----------CCccEEEEccCCCCCcccCCCeEEEeeCc---c
Q psy14896 559 ESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTN----------YPGVNYYWARDYFPNFVEEDKRVFVSYDG---A 625 (813)
Q Consensus 559 ~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~----------~p~~~v~W~k~~~~~~~~~~~~~~~~~~~---~ 625 (813)
..+.|.|..+|.+........+..|+.+.|.|.+ .+ .|.+.++|+|++.++ ....++....++ +
T Consensus 89 ~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~-~~~~l~c~~~~~~p~~~i~W~~~~~~~--~~~~~~~~~~~~~~~~ 165 (317)
T 2y25_A 89 SRLKLVDEAFKELMMEVCKKIALSATDLKIQSTA-EGIQLYSFVTYYVEDLKVNWSHNGSAI--RYSDRVKTGVTGEQIW 165 (317)
T ss_dssp EEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECS-SEEEEEEEBSSCCSSCEEEEEESSSBC--CCCSSEEEEECSSEEE
T ss_pred EEEEEEEecCccccccCCceecccCCCeEEEeec-cccEEEEEeccCCCCcEEEEEECCEEC--CCCCCeEEeccCCEEE
Confidence 3355555555544333334455678888888887 45 799999999999874 344555555444 3
Q ss_pred EEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccC------------CCccccccCCCCC-CCCCcCCCCCCeEEE
Q psy14896 626 LYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPH------------SNFQQLKFPNNFP-KTFPEAPKAGDKVRL 692 (813)
Q Consensus 626 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~------------p~~~~~~~p~~~~-~~~~~~~~~G~~v~l 692 (813)
|.|.+++.+|+|.|+|.|.|..|.... .+.|.|... +.......|.... .+....+.+|+.++|
T Consensus 166 L~i~~~~~~d~G~Y~C~a~n~~g~~~~---~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l 242 (317)
T 2y25_A 166 LQINEPTPNDKGKYVMELFDGKTGHQK---TVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNL 242 (317)
T ss_dssp EEEESCCGGGCEEEEEEEECSSCEEEE---EEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCE
T ss_pred EEECcCCcccCeeEEEEEEeCCceEEE---EEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEE
Confidence 999999999999999999998875432 244443210 0000000000000 122256789999999
Q ss_pred EEEecCCCCCeEEEEeCCcccCCCceeeec-----ceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcC
Q psy14896 693 ECVAFGYPVPSYNWTRRGSPLPRNAYFENF-----NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 761 (813)
Q Consensus 693 ~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 761 (813)
.|.+.|.|.|.|+|+|+|..+..+.++... ...|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..|
T Consensus 243 ~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 316 (317)
T 2y25_A 243 TCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 316 (317)
T ss_dssp EEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEcC
Confidence 999999999999999999999776654322 248999999999999999999999999999999999854
No 47
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=1.1e-32 Score=301.82 Aligned_cols=371 Identities=13% Similarity=0.131 Sum_probs=213.1
Q ss_pred CCceeecCCCccccccEEEEeeeccCC--CCeEEEeecc--cccccccc-------cccccCCCccEEee------CCeE
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------GGNL 258 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g--~~l~~~~~-------~~~~~~~~~~~~~~------~~~l 258 (813)
|..+.+.+| ++++|.|.+.+.+ .+.|.|||+. ..+..... .........|+.+. +++|
T Consensus 7 p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 81 (444)
T 1igt_B 7 SGGGLVQPG-----GSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYL 81 (444)
T ss_dssp ECCCEECTT-----CCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEE
T ss_pred CCCeEEcCC-----CCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEE
Confidence 444566566 7799999998764 6789999974 22210000 00011123455543 2468
Q ss_pred EEcCCccccCCeeEEEEeecCcee--eEeeeeEEeeee----ecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEEe
Q psy14896 259 IINDPRQVEDRGSYHCKASNKFGS--IISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWA 331 (813)
Q Consensus 259 ~i~~~~~~~d~G~Y~C~a~n~~g~--~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~ 331 (813)
.|.+. +.+|+|.|+|.|.|..+. ..+..+.|.|.. +|.+........+.+|+.++|.|.+.+..|.+ .++|+
T Consensus 82 ~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 160 (444)
T 1igt_B 82 QMSRL-KSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWN 160 (444)
T ss_dssp EECSC-CGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEG
T ss_pred EECCC-CHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEe
Confidence 88885 899999999999997654 223456676653 23222222233347889999999975555776 99999
Q ss_pred eccccccccCCccEEEc----cCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCC----------ccccc
Q psy14896 332 RDYFPNFVEEDKRVFVS----YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS----------NFQQL 397 (813)
Q Consensus 332 k~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~----------~~~~~ 397 (813)
|++..+........... ..+.|.|.++..+| |.|+|.|.|..+..... ..+.+.... .....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~ 236 (444)
T 1igt_B 161 SGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVD---KKIEPRGPTIKPCPPCKCPAPNLL 236 (444)
T ss_dssp GGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEE---EECCCCCCSCCCCCCCSCCCSCCC
T ss_pred cCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceE---EEeccCCCCcccCCccccCCcccC
Confidence 99886422211111111 12468999999899 99999999988753111 111110000 00000
Q ss_pred ccCCC-CCCCCCcC-CCCCCcEEEEEEEeecC----CCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCc
Q psy14896 398 KFPNN-FPKTFPEA-PKAGDKVRLECVAFGYP----VPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTD 471 (813)
Q Consensus 398 ~~~~~-~~~~~~~~-v~~g~~~~l~C~~~g~p----~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~ 471 (813)
..|.. ..+..... +.+|+.+.|.|.+.|.| .+.|.|+|++..+.......
T Consensus 237 ~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~------------------------ 292 (444)
T 1igt_B 237 GGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQT------------------------ 292 (444)
T ss_dssp CCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBC------------------------
T ss_pred CCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCccccc------------------------
Confidence 00000 00000011 46677777777776653 24666666665543210000
Q ss_pred eEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEc
Q psy14896 472 VVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASN 551 (813)
Q Consensus 472 ~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n 551 (813)
..- .....+ ...++|.|.++ ..+|+|.|+|.|.|
T Consensus 293 ---------------------------~~~-----------------~~~~~~-~~~~~L~I~~v-~~~d~G~Y~C~a~n 326 (444)
T 1igt_B 293 ---------------------------HRE-----------------DYNSTL-RVVSALPIQHQ-DWMSGKEFKCKVNN 326 (444)
T ss_dssp ---------------------------CEE-----------------ECSSSE-EEEEEEECCHH-HHHTTCEEEEEEEC
T ss_pred ---------------------------cee-----------------CCCCcE-EEEEEEEEcHH-HhccCCcEEEEEEc
Confidence 000 000111 12357999886 89999999999999
Q ss_pred CceeEE-eecEEE--EEeecccccccCCCc-eeccCCCceEEeCCCCC-CCcc-EEEEccCCCCCcccCCCeEEEeeCcc
Q psy14896 552 KFGSII-SESVQL--AFGFIGEFNLKRAPE-IGNQNWGKAMFCDPPTN-YPGV-NYYWARDYFPNFVEEDKRVFVSYDGA 625 (813)
Q Consensus 552 ~~g~~~-s~~~~l--~v~~~p~~~~~~~~~-~~~~g~~~~l~C~~~~~-~p~~-~v~W~k~~~~~~~~~~~~~~~~~~~~ 625 (813)
..|... ...+.+ .+..+|.+.+...+. .+..| .++|.|.+ .| +|++ .|+|+|+|.++............+|+
T Consensus 327 ~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~-~~~L~C~~-~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~ 404 (444)
T 1igt_B 327 KDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKK-QVTLTCMV-TDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGS 404 (444)
T ss_dssp TTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSS-EEEEEEEE-EEEBSSCCEEEEEETTEECSSEEECCCEECTTSC
T ss_pred CCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCC-eEEEEEEE-EeeeCCCCEEEEEECCEEccccccccceeCCCCC
Confidence 987641 122222 344566555443333 23344 49999999 55 5665 99999999764211111222345564
Q ss_pred ------EEEEeecccCCeeEEEEEEeeec
Q psy14896 626 ------LYFSALEQIDAGNYSCNVQSKVS 648 (813)
Q Consensus 626 ------L~i~~~~~~d~G~Y~C~a~n~~g 648 (813)
|.|.....+|+|.|+|.|.|...
T Consensus 405 ~~~~s~l~i~~~~~~d~g~YtC~a~n~~l 433 (444)
T 1igt_B 405 YFMYSKLRVEKKNWVERNSYSCSVVHEGL 433 (444)
T ss_dssp EEEEEEEEEEHHHHHTCCCEEEEEECTTS
T ss_pred EEEEEEEEEChHHhcCCCeEEEEEECCCc
Confidence 45555566779999999999763
No 48
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=100.00 E-value=2e-31 Score=273.97 Aligned_cols=247 Identities=17% Similarity=0.251 Sum_probs=192.0
Q ss_pred ccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEee
Q psy14896 480 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISE 559 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~ 559 (813)
.+|+.++|.|.+.| .|.|+|++..+ ......+++|.|.++ ..+|+|.|+|.|.| |. +.
T Consensus 25 ~~G~~v~l~C~~~~----~i~W~~~~~~~-------------~~~~~~~~~L~i~~~-~~~d~G~Y~C~~~n--g~--~~ 82 (290)
T 2o26_X 25 EAGDTLSLTCIDPD----FVRWTFKTYFN-------------EMVENKKNEWIQEKA-EATRTGTYTCSNSN--GL--TS 82 (290)
T ss_dssp ETTSCEEEEEECTT----EEEEEEECSSS-------------CEEEECSSEEEETTC-CGGGCEEEEEEESS--SC--EE
T ss_pred cCCCcEEEEECCCC----cEEEecCCcce-------------eeecCCCceEEEecc-CHHhCeEEEEEeeC--Cc--cE
Confidence 78999999999988 89999999643 112234489999997 99999999999999 54 45
Q ss_pred cEEEEEeecccccccCCCceeccCCCceEEeCCCCCCCc-cEEEE-ccCCCCCcccCCCeEEEeeCccEEEEeecccCCe
Q psy14896 560 SVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYW-ARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAG 637 (813)
Q Consensus 560 ~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~v~W-~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 637 (813)
.+.|.|..+|.+........+.+|+.++|.|.+ .+ |. +.++| +++|.+ +....++....++.|.|.++..+|+|
T Consensus 83 ~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~-p~~~~v~W~~~~g~~--l~~~~~~~~~~~~~L~i~~v~~~d~G 158 (290)
T 2o26_X 83 SIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPL-TD-PQVSQYSLIECDGKS--LPTDLTFVPNPKAGITIKNVKRAYHR 158 (290)
T ss_dssp EEEEEEECSSCCBCCCCCEEEETTSCEEECCCB-SC-CSCEEEEEEETTSCC--CCTTCEEEEETTTEEEEESCCGGGTT
T ss_pred EEEEEEeCCCcccccccceEEecCCeEEEeCcC-CC-CCCceEEEEeCCCcC--CCCCCceeeCCCCCEEEecccHHHCC
Confidence 578888877766555666677889999999999 45 77 99999 578865 45567777777889999999999999
Q ss_pred -eEEEEEEeeecCccccCceeeEEEc----cCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCe-EEEEeCCc
Q psy14896 638 -NYSCNVQSKVSDTGRNGPFFPLKVF----PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS-YNWTRRGS 711 (813)
Q Consensus 638 -~Y~C~a~n~~g~~~~~~~~~~l~v~----~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~-i~W~k~g~ 711 (813)
.|+|.|.|..|... +..+.|.|. .+|.+.. ......+.+|++++|.|.+.|.|.|. |+|+|+|.
T Consensus 159 ~~Y~C~a~n~~~~~~--s~~~~l~V~~~~~~~P~i~~--------~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~ 228 (290)
T 2o26_X 159 LCVRCAAQRDGTWLH--SDKFTLKVREAIKAIPVVSV--------PETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNP 228 (290)
T ss_dssp CEEEEEEEETTEEEE--CCCEEEEEECCCCSCCEEEC--------SCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESS
T ss_pred CEEEEEEEECCceEE--eEEEEEEEEeCCCCCCcccc--------CCCcceEecCCcEEEEEEEecCCcceeEEEecCCC
Confidence 99999999854422 223667776 3333221 22235789999999999999999996 99999998
Q ss_pred cc----CCCc--e-----eeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCC
Q psy14896 712 PL----PRNA--Y-----FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 762 (813)
Q Consensus 712 ~l----~~~~--~-----~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 762 (813)
.+ .... . .....+.|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 229 QPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp SEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred CCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 73 2221 1 12335689999999999999999999999999999999999876
No 49
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.98 E-value=1.1e-32 Score=287.14 Aligned_cols=264 Identities=15% Similarity=0.218 Sum_probs=196.4
Q ss_pred ccccCeEEEEEeeccC-CCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEe
Q psy14896 480 SILNDITLSCYAGGYP-NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIIS 558 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s 558 (813)
.+|+.+.|.|.+.+.| .+.|.|+|+|..+. +......++...+++|.|.++ ..+|+|.|+|.|.|..|....
T Consensus 18 ~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~------~~~~~~~~~~~~~~~L~i~~v-~~~D~G~Y~C~a~n~~g~~~~ 90 (315)
T 1itb_B 18 SANEIDVRPCPLNPNEHKGTITWYKDDSKTP------VSTEQASRIHQHKEKLWFVPA-KVEDSGHYYCVVRNSSYCLRI 90 (315)
T ss_dssp ETTSCCCCBCCCCSCCCSSCCCEECTTSCSC------SCCCTTSSSEECSSBEECTTC-CGGGCSCCEECCCSSSCCCCE
T ss_pred cCCCcEEEEeeccCcCCCceEEEEeCCCcCc------cccccCCcEeccCCeEEECCC-ChhhCEEEEEEEeCCceEEEE
Confidence 7899999999999988 78999999985421 122335566667789999997 999999999999999876532
Q ss_pred ecEEEEE-eecccccccC---CCceeccCCCceEEeCCC-----CCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEE
Q psy14896 559 ESVQLAF-GFIGEFNLKR---APEIGNQNWGKAMFCDPP-----TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS 629 (813)
Q Consensus 559 ~~~~l~v-~~~p~~~~~~---~~~~~~~g~~~~l~C~~~-----~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~ 629 (813)
. +.+.+ ..+|.+.... ....+..|+.++|.|.+. .|.|.+.++|+|++.++... ..+ ....+++|.|.
T Consensus 91 ~-~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~-~~~-~~~~~~~L~i~ 167 (315)
T 1itb_B 91 K-ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLD-NIH-FSGVKDRLIVM 167 (315)
T ss_dssp E-CCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCC-SSS-EEEETTEEEES
T ss_pred E-EEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCc-cce-EeecCceEEEE
Confidence 2 33332 2334332221 224567899999999983 78999999999999874332 223 34457789999
Q ss_pred eecccCCeeEEEEEE-eeecCccccCceeeEEEc-----cCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCe
Q psy14896 630 ALEQIDAGNYSCNVQ-SKVSDTGRNGPFFPLKVF-----PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS 703 (813)
Q Consensus 630 ~~~~~d~G~Y~C~a~-n~~g~~~~~~~~~~l~v~-----~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~ 703 (813)
+++.+|+|.|+|.|. |..|........+.+.+. .+|.+. .+ ......+.+|+.++|.|.+.|.|.|.
T Consensus 168 ~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~---~~----~~~~~~~~~g~~v~l~C~~~g~P~p~ 240 (315)
T 1itb_B 168 NVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIV---SP----ANETMEVDLGSQIQLICNVTGQLSDI 240 (315)
T ss_dssp SCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEEC---SC----CSEEEECCSSSCEEEEEEEEECTTSE
T ss_pred eceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEe---cC----CCCcEEEeCCCcEEEEEEEecCCCCe
Confidence 999999999999999 777765333333444443 222221 11 11124688999999999999999999
Q ss_pred EEEEeCCcccCCCcee------e----------ecceEEEECCCCCCC-CEEEEEEEEcCCCceEEEEEEEEEc
Q psy14896 704 YNWTRRGSPLPRNAYF------E----------NFNRILTIPNVKVED-QGEYICRASNDRSALESSVTISIQA 760 (813)
Q Consensus 704 i~W~k~g~~l~~~~~~------~----------~~~~~L~i~~v~~~d-~G~Y~C~a~N~~G~~~~~~~l~V~~ 760 (813)
|+|+|||..+..+... . ...+.|+|.+++.+| +|.|+|.|.|.+|..++++.|.|..
T Consensus 241 i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 314 (315)
T 1itb_B 241 AYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPV 314 (315)
T ss_dssp EEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECCC
T ss_pred eEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEecC
Confidence 9999999998765421 1 123489999999999 9999999999999999999998853
No 50
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.98 E-value=5.3e-32 Score=296.25 Aligned_cols=313 Identities=14% Similarity=0.190 Sum_probs=205.6
Q ss_pred ccccCeEEEEEeeccC--CCcEEEeecc--ccccceecc-------ccCCCCCceEEee------CCeEEEeCCCCCCCC
Q psy14896 480 SILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVAN-------LIDPLSDKRFTLS------GGNLIINDPRQVEDR 542 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p--~~~v~W~k~~--~~~~~~~~~-------~~~~~~~~~~~~~------~~~l~i~~~~~~~d~ 542 (813)
.+|+.++|.|.+.+.+ .+.|.|||+. ..+..+... ........|+.+. ..+|.|.++ +.+|+
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v-~~~D~ 91 (444)
T 1igt_B 13 QPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRL-KSEDT 91 (444)
T ss_dssp CTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSC-CGGGC
T ss_pred cCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCC-CHHHC
Confidence 7899999999999875 6789999974 222111100 0011122355442 248999997 99999
Q ss_pred ceEEEEEEcCcee--EEeecEEEEEee----cccccccCCCceeccCCCceEEeCCCCCCCcc-EEEEccCCCCCcccCC
Q psy14896 543 GSYHCKASNKFGS--IISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPNFVEED 615 (813)
Q Consensus 543 G~Y~C~a~n~~g~--~~s~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~v~W~k~~~~~~~~~~ 615 (813)
|.|+|.|.|..+. .....+.|.|.. +|.+........+.+|+.++|.|.+....|.+ .|+|+|++.++.....
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~ 171 (444)
T 1igt_B 92 AMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF 171 (444)
T ss_dssp EEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEEC
T ss_pred EEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEec
Confidence 9999999997654 233446677753 23332222233347899999999994335776 9999999875321111
Q ss_pred CeEE----EeeCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEc------------------cCCCccccccC
Q psy14896 616 KRVF----VSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF------------------PHSNFQQLKFP 673 (813)
Q Consensus 616 ~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~------------------~~p~~~~~~~p 673 (813)
.... ....+.|.|.++..+| |.|+|.|.|..|..... ..+.+. .+|.+. ..|
T Consensus 172 ~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~--~~~ 245 (444)
T 1igt_B 172 PAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVD---KKIEPRGPTIKPCPPCKCPAPNLLGGPSVF--IFP 245 (444)
T ss_dssp CCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEE---EECCCCCCSCCCCCCCSCCCSCCCCCCEEE--EEC
T ss_pred CccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceE---EEeccCCCCcccCCccccCCcccCCCceEE--ecC
Confidence 1111 1112458999999999 99999999998753211 111110 011110 011
Q ss_pred CCCCCCCCcC-CCCCCeEEEEEEecCCC----CCeEEEEeCCcccCCCcee----e-----ecceEEEECCCCCCCCEEE
Q psy14896 674 NNFPKTFPEA-PKAGDKVRLECVAFGYP----VPSYNWTRRGSPLPRNAYF----E-----NFNRILTIPNVKVEDQGEY 739 (813)
Q Consensus 674 ~~~~~~~~~~-~~~G~~v~l~C~~~g~P----~p~i~W~k~g~~l~~~~~~----~-----~~~~~L~i~~v~~~d~G~Y 739 (813)
+.... +.+|++++|.|.+.|.| .+.|+|+|+|..+...... . ...++|.|.+++.+|+|.|
T Consensus 246 -----p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y 320 (444)
T 1igt_B 246 -----PKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEF 320 (444)
T ss_dssp -----CCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEE
T ss_pred -----CchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcE
Confidence 11112 58899999999999984 3699999999887543211 0 1245899999999999999
Q ss_pred EEEEEcCCCce--EEEEEE--EEEcCCcccccCC-ceeecCCCeEEEEEEEcc-cCCc-eEEEEECCEecccc
Q psy14896 740 ICRASNDRSAL--ESSVTI--SIQAEPNFTIPLT-DKHMDNQADLTWTCEAFG-VPDV-TYSWFRNGELGHQM 805 (813)
Q Consensus 740 ~C~a~N~~G~~--~~~~~l--~V~~~P~~~~~~~-~~~~~~g~~~~l~C~~~g-~p~~-~v~W~k~g~~l~~~ 805 (813)
+|.|.|..|.. +..+.+ .+..+|.+...+. ...+..| .++|.|.+.| .|++ .|+|+|||++|...
T Consensus 321 ~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 392 (444)
T 1igt_B 321 KCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKK-QVTLTCMVTDFMPEDIYVEWTNNGKTELNY 392 (444)
T ss_dssp EEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSS-EEEEEEEEEEEBSSCCEEEEEETTEECSSE
T ss_pred EEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCC-eEEEEEEEEeeeCCCCEEEEEECCEEcccc
Confidence 99999999977 344433 5567888764333 2334445 5999999999 4555 89999999998543
No 51
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.98 E-value=2.1e-32 Score=283.89 Aligned_cols=272 Identities=17% Similarity=0.170 Sum_probs=196.0
Q ss_pred ccccCeEEEEEeecc-CCCcEEEeeccccccceec-------cccCCCCCceEEe-----eCCeEEEeCCCCCCCCceEE
Q psy14896 480 SILNDITLSCYAGGY-PNPSYEWFKEDYVQDRLVA-------NLIDPLSDKRFTL-----SGGNLIINDPRQVEDRGSYH 546 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~-p~~~v~W~k~~~~~~~~~~-------~~~~~~~~~~~~~-----~~~~l~i~~~~~~~d~G~Y~ 546 (813)
.+|++++|.|.+.+. |.+.|+|+|++........ .........+... .+++|.|.++ +.+|+|.|+
T Consensus 12 ~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v-~~~D~G~Y~ 90 (308)
T 4fom_A 12 VWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNI-GFSDSGKYI 90 (308)
T ss_dssp ETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSC-CGGGCEEEE
T ss_pred EcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccC-CHHHCEEEE
Confidence 679999999998754 4567999998754322111 1112222334433 2357999997 999999999
Q ss_pred EEEEcCceeEEeecEEEEEeeccccccc--CCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEE----E
Q psy14896 547 CKASNKFGSIISESVQLAFGFIGEFNLK--RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVF----V 620 (813)
Q Consensus 547 C~a~n~~g~~~s~~~~l~v~~~p~~~~~--~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~----~ 620 (813)
|.|.|..+...+..+.+.+...|.+... ........++.+.|.|.+..|.|.+.|+|+|++.++... .... .
T Consensus 91 C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~--~~~~~~~~~ 168 (308)
T 4fom_A 91 CKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMEST--TTSFPNETA 168 (308)
T ss_dssp EEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEE--EEECTTSCE
T ss_pred EEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccc--cceeeeecc
Confidence 9999874444455566776665554332 333344567788999987678999999999998764211 1100 1
Q ss_pred eeCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCC
Q psy14896 621 SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYP 700 (813)
Q Consensus 621 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P 700 (813)
...+.|.|..+..+|+|.|+|.|.|..|.... ...+.|.|..+|.+... ......+..|+.++|.|.+.|.|
T Consensus 169 ~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~-~~~~~l~V~~~P~~~~~-------~~~~~~~~~g~~v~l~C~~~g~P 240 (308)
T 4fom_A 169 TIISQYKLFPTRFARGRRITCVVKHPALEKDI-RYSFILDIQYAPEVSVT-------GYDGNWFVGRKGVNLKCNADANP 240 (308)
T ss_dssp EEEEEEEECCCGGGTTCEEEEEEECTTCSSCE-EEEEECCCCEEEEECCB-------CCCSCEETTCCSCEEECCEEEES
T ss_pred cccccceEEeeeecCCccEEEEEEccCCCCce-EEeEEEEEecCCeeEEc-------ccceeeeeccccEEEEEEEecCC
Confidence 11235999999999999999999998876433 23456667777654332 11224567899999999999999
Q ss_pred CC-eEEEEeCCcccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCc
Q psy14896 701 VP-SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPN 763 (813)
Q Consensus 701 ~p-~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~ 763 (813)
+| .|+|+|++..+...... ..+..|.|.+++.+|+|.|+|+|.|.+|..++++.|.|.+||.
T Consensus 241 ~p~~v~W~k~~~~~~~~~~~-~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 241 PPFKSVWSRLDGQWPDGLLA-SDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp CEEEEECCBSSSCCCSSCBC-STTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC-
T ss_pred CCcEEEEEECCeECCCcEEE-cCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCCC
Confidence 98 69999999988765433 3456788999999999999999999999999999999999986
No 52
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.97 E-value=2.5e-32 Score=297.73 Aligned_cols=356 Identities=15% Similarity=0.232 Sum_probs=222.0
Q ss_pred CCCceeecCCCeEEEecCCCC-CCcceEEEeecc--cccc-c--------------cCCccEEEccC-----ccEEEeee
Q psy14896 302 RAPEIGNQNWGKAMFCDPPTN-YPGVNYYWARDY--FPNF-V--------------EEDKRVFVSYD-----GALYFSAL 358 (813)
Q Consensus 302 ~~~~~~~~~~~~~l~C~~~~~-~p~~~v~W~k~~--~~~~-~--------------~~~~~~~~~~~-----~~L~i~~v 358 (813)
+.+..+.+|+.++|.|.+... .+.+.+.|+|++ ..+. + ....|+.+..+ .+|.|.++
T Consensus 6 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (434)
T 1igy_B 6 SGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSL 85 (434)
T ss_dssp CCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSB
T ss_pred CCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCC
Confidence 345678899999999997432 146889999974 2210 0 11356666543 37999999
Q ss_pred eecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeec-CCC-eeeEeec
Q psy14896 359 EQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVP-SYNWTRR 436 (813)
Q Consensus 359 ~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~-p~p-~i~W~~~ 436 (813)
+.+|+|.|+|.|.|..+. .+..+.|.|...+. ..|..........+.+|+.+.|.|.+.|. |.| .|.|+++
T Consensus 86 ~~~D~G~Y~C~~~~~~~~---~~~~~~l~V~~~~~----~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~ 158 (434)
T 1igy_B 86 TSDDSAVYYCVREGEVPY---WGQGTTVTVSSAKT----TPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG 158 (434)
T ss_dssp CGGGCSEECCCCSSSSCC---CCCCEECEECCSCC----BCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTT
T ss_pred ChHHCEEEEEEEEccccc---cCCceEEEEccCCC----CCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeC
Confidence 999999999999985322 23346777764211 11111100111245789999999999886 776 8999888
Q ss_pred CCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceecccc
Q psy14896 437 GSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 516 (813)
Q Consensus 437 ~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~ 516 (813)
+..+.... + +. .
T Consensus 159 ~~~~~~~~-~------------------------------------------------~~-------------------~ 170 (434)
T 1igy_B 159 SLSSGVHT-F------------------------------------------------PA-------------------V 170 (434)
T ss_dssp TBCSSEEE-C------------------------------------------------CC-------------------E
T ss_pred CcCCCeEe-c------------------------------------------------Cc-------------------e
Confidence 76531100 0 00 0
Q ss_pred CCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEe----------ec--ccccccCCC-ce-ecc
Q psy14896 517 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG----------FI--GEFNLKRAP-EI-GNQ 582 (813)
Q Consensus 517 ~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~----------~~--p~~~~~~~~-~~-~~~ 582 (813)
.....+. ..+.|.|..+ ..+| |.|+|.|.|..|.... ...+.+. .+ |.+.+.... .. +.+
T Consensus 171 --~~~~~~~-~~s~L~i~~~-~~~d-g~Y~C~a~n~~~~~~~-~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~ 244 (434)
T 1igy_B 171 --LQSDLYT-LSSSVTVPSS-PRPS-ETVTCNVAHPASSTKV-DKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLI 244 (434)
T ss_dssp --ECSSCEE-EEEEEEEETT-TTTS-SCCEEEEECTTTTCCE-EEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHST
T ss_pred --ecCCcEE-EEEEEEEcch-hcCC-CcEEEEEEeCCCCccc-eeeccCCCCCCccccCCCCcCcEEEEeCCChHHhccc
Confidence 0001121 2256888886 7788 9999999999876311 1222111 00 222222211 22 788
Q ss_pred CCCceEEeCCCCCCC----ccEEEEccCCCCCcccCCCeEEE------eeCccEEEEeecccCCeeEEEEEEeeecCccc
Q psy14896 583 NWGKAMFCDPPTNYP----GVNYYWARDYFPNFVEEDKRVFV------SYDGALYFSALEQIDAGNYSCNVQSKVSDTGR 652 (813)
Q Consensus 583 g~~~~l~C~~~~~~p----~~~v~W~k~~~~~~~~~~~~~~~------~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 652 (813)
|+.++|.|.+. |.+ .+.|+|+|++..+.......... ...++|.|.++..+|+|.|+|.|.|..|....
T Consensus 245 G~~~~L~C~~~-g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 323 (434)
T 1igy_B 245 TVTPKVTCVVV-DISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPI 323 (434)
T ss_dssp TSCCEEEEEEC-CCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCC
T ss_pred CCCcEEEEEEe-ccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCce
Confidence 99999999994 663 46899999997642211111111 12346999999999999999999999886432
Q ss_pred cCceeeE--EEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CC-CeEEEEeCCcccCCCcee----ee---
Q psy14896 653 NGPFFPL--KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PV-PSYNWTRRGSPLPRNAYF----EN--- 721 (813)
Q Consensus 653 ~~~~~~l--~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~-p~i~W~k~g~~l~~~~~~----~~--- 721 (813)
.. .+.+ .+..+|.+... +. ......|+.++|.|.+.|. |+ +.|+|+|||.+|...... ..
T Consensus 324 ~~-~v~~~~~~~~~P~v~~~--~~------~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~ 394 (434)
T 1igy_B 324 EK-TISKTKGKPRAPQVYTI--PP------PKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGS 394 (434)
T ss_dssp CC-CCCCCCSCCBCCCCEEE--CC------CSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSC
T ss_pred eE-EEeccCCCCcCCEEEEE--CC------CHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCc
Confidence 21 2222 34445544322 11 1223457789999999985 43 389999999988543211 11
Q ss_pred --cceEEEECCCCCCCCEEEEEEEEcCCC
Q psy14896 722 --FNRILTIPNVKVEDQGEYICRASNDRS 748 (813)
Q Consensus 722 --~~~~L~i~~v~~~d~G~Y~C~a~N~~G 748 (813)
..+.|.|.....+|+|.|+|.|.|...
T Consensus 395 ~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 423 (434)
T 1igy_B 395 YFVYSKLNVQKSNWEAGNTFTCSVLHEGL 423 (434)
T ss_dssp EEEEEEEEEEHHHHHTTCCEEEEEEETTS
T ss_pred EEEEEEEEECchhccCCCEEEEEEEcCCC
Confidence 124578888888899999999999854
No 53
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.97 E-value=2.1e-31 Score=278.78 Aligned_cols=260 Identities=16% Similarity=0.182 Sum_probs=195.6
Q ss_pred ccccCeEEEEEeecc---------CCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCc-eEEEEE
Q psy14896 480 SILNDITLSCYAGGY---------PNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRG-SYHCKA 549 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~---------p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G-~Y~C~a 549 (813)
.+|+.+.|.|.+.+. |.+.|.|+|++..+.. ..+. ..+++|.|.++ ..+|+| .|+|.|
T Consensus 42 ~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~----------~~~~-~~~~~L~i~~v-~~~D~Gs~Y~C~a 109 (329)
T 3oq3_B 42 ALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRP----------LNRR-VKNGDLWIANY-TSNDSHRRYLCTV 109 (329)
T ss_dssp CTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEE----------CSTT-EETTEEEESSC-CGGGGGCCEEEEE
T ss_pred ECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccc----------cCce-eecceEEEcCC-ChHhCCCcEEEEE
Confidence 789999999999884 6689999999965321 1111 56889999997 999999 999999
Q ss_pred EcCceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCC-ccEEEEccCCCCCcccCCCeEEEeeCccEEE
Q psy14896 550 SNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP-GVNYYWARDYFPNFVEEDKRVFVSYDGALYF 628 (813)
Q Consensus 550 ~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i 628 (813)
.|..|......+.+.+..+|.+........+.+|+.++|.|.+ .+.| .+.|+|+|++.++. ....++... +++|.|
T Consensus 110 ~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~-~g~p~~~~i~W~k~~~~l~-~~~~~~~~~-~~~L~I 186 (329)
T 3oq3_B 110 TTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGI-LYAKHYNNITWYKNNQELI-IDGTKYSQS-GQNLII 186 (329)
T ss_dssp ECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCC-CSCCCCCEEEEEETTEECC-CSSSSEEEE-TTEEEE
T ss_pred EeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEecc-CCCCCCceEEEEECCccCC-CCCceEecC-CCEEEE
Confidence 9998875444444445555544333333446779999999999 7889 89999999998753 233455444 788999
Q ss_pred EeecccCCeeEEEEEEee--ecCcccc-CceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCC---CC
Q psy14896 629 SALEQIDAGNYSCNVQSK--VSDTGRN-GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYP---VP 702 (813)
Q Consensus 629 ~~~~~~d~G~Y~C~a~n~--~g~~~~~-~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P---~p 702 (813)
.+++.+|+|.|+|.|.|. .|..... ...+.|.|..+|......+ .+....+.+|++++|.|.+.|.| +|
T Consensus 187 ~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-----~~~~~~v~~G~~~~l~C~~~g~p~~~~~ 261 (329)
T 3oq3_B 187 HNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI-----LDPKINVTIGEPANITCTAVSTSLLVDD 261 (329)
T ss_dssp CSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE-----CCSEEEECTTSCEEEEEEEEETTCCTTC
T ss_pred eecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee-----cCCeeEEecCCCEEEEEEEEECCCCCCC
Confidence 999999999999999997 6543321 2236688877663311110 11225788999999999999998 77
Q ss_pred -eEEEEeCCccc-CCCcee-ee-------cceEEEECCCCCCCCE-EEEEEEEcCCCceEEEEEEEEE
Q psy14896 703 -SYNWTRRGSPL-PRNAYF-EN-------FNRILTIPNVKVEDQG-EYICRASNDRSALESSVTISIQ 759 (813)
Q Consensus 703 -~i~W~k~g~~l-~~~~~~-~~-------~~~~L~i~~v~~~d~G-~Y~C~a~N~~G~~~~~~~l~V~ 759 (813)
.|+|+|+|..+ ..+... .. ..+.|.|.+++.+|+| .|+|.|.|..|..+.++.|.|.
T Consensus 262 i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v~ 329 (329)
T 3oq3_B 262 VLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVLE 329 (329)
T ss_dssp CEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEEC
T ss_pred cEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEeC
Confidence 89999999985 333221 11 3578999999999999 9999999999999999998873
No 54
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.97 E-value=2e-30 Score=286.05 Aligned_cols=359 Identities=18% Similarity=0.240 Sum_probs=221.8
Q ss_pred CCCceeecCCCeEEEecCCCCCC--cceEEEeecc--cccc-c--------------cCCccEEEccC-----ccEEEee
Q psy14896 302 RAPEIGNQNWGKAMFCDPPTNYP--GVNYYWARDY--FPNF-V--------------EEDKRVFVSYD-----GALYFSA 357 (813)
Q Consensus 302 ~~~~~~~~~~~~~l~C~~~~~~p--~~~v~W~k~~--~~~~-~--------------~~~~~~~~~~~-----~~L~i~~ 357 (813)
+.+..+.+|+.++|.|.+. +.+ .+.+.|+|+. +... + ....|+.+..+ .+|.|.+
T Consensus 8 p~~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (475)
T 1iga_A 8 SGAEVKKPGASVKVSCKAS-GYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSS 86 (475)
T ss_pred CCcEEEeCCCCEEEEEEec-CCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECC
Confidence 4566788999999999964 333 6789999863 2211 1 11345555432 3799999
Q ss_pred eeecCCeeeEEEEeeeccccC---CCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeec-CC-C-ee
Q psy14896 358 LEQIDAGNYSCNVQSKVSDTG---RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PV-P-SY 431 (813)
Q Consensus 358 v~~~D~G~Y~C~a~n~~g~~~---~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~-p~-p-~i 431 (813)
++.+|+|.|.|.+.|..|... ..+..+.|.|...+. ..|.... ..+..+.+|+.+.|.|.+.|. |. | .|
T Consensus 87 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~----~~P~i~~-~~~~~~~~g~~v~L~C~~~g~~P~~p~~v 161 (475)
T 1iga_A 87 LRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASP----TSPKVFP-LSLCSTQPDGNVVIACLVQGFFPQEPLSV 161 (475)
T ss_pred CChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCC----cCCeEEe-cCccccCCCCeEEEEEEEeeecCCCceEE
Confidence 999999999999998765210 123346777764211 0111111 111234689999999999886 65 5 89
Q ss_pred eEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccce
Q psy14896 432 NWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRL 511 (813)
Q Consensus 432 ~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~ 511 (813)
.|++++..+.... . + .
T Consensus 162 ~W~~~~~~~~~~~-~------------------------------------------------~--~------------- 177 (475)
T 1iga_A 162 TWSESGQGVTARN-F------------------------------------------------P--P------------- 177 (475)
T ss_pred EEcCCCcccceEe-C------------------------------------------------C--c-------------
Confidence 9988764321000 0 0 0
Q ss_pred eccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEe------------------ecccc-c
Q psy14896 512 VANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG------------------FIGEF-N 572 (813)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~------------------~~p~~-~ 572 (813)
........+. ..+.|.|..+ ..+|+|.|+|.|.|..+...+..+.+.|. .+|.+ .
T Consensus 178 ----~~~~~~g~~~-~~s~L~i~~~-~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~ 251 (475)
T 1iga_A 178 ----SQDASGDLYT-TSSQLTLPAT-QCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSL 251 (475)
T ss_pred ----eecCCCCcEE-EEEEEEechh-HcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCCCCCCcEEEE
Confidence 0000111111 1245778775 77999999999999987533333443331 12222 1
Q ss_pred ccCCCceeccCCCceEEeCCCCCCCc---cEEEEccCCCCCcccCCCeEEE------eeCccEEEEeecccCCeeEEEEE
Q psy14896 573 LKRAPEIGNQNWGKAMFCDPPTNYPG---VNYYWARDYFPNFVEEDKRVFV------SYDGALYFSALEQIDAGNYSCNV 643 (813)
Q Consensus 573 ~~~~~~~~~~g~~~~l~C~~~~~~p~---~~v~W~k~~~~~~~~~~~~~~~------~~~~~L~i~~~~~~d~G~Y~C~a 643 (813)
..+....+.+|+.++|.|.+ .|.++ +.|+| ++ .++.......... ...++|.|.++..+|+|.|+|.|
T Consensus 252 ~~p~~~~~~~G~~v~L~C~~-~g~~p~~~~~i~W-~~-~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a 328 (475)
T 1iga_A 252 HRPALEDLLLGSEANLTCTL-TGLRDASGVTFTW-TP-SSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTA 328 (475)
T ss_pred cCCChHHhccCCceEEEEEE-EcccCCCceEEEE-CC-CCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEE
Confidence 11222335789999999999 46543 69999 43 3322111111111 13446999999999999999999
Q ss_pred EeeecCccccCceeeEE---EccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCC--CeEEEEeCCcccCCCce
Q psy14896 644 QSKVSDTGRNGPFFPLK---VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV--PSYNWTRRGSPLPRNAY 718 (813)
Q Consensus 644 ~n~~g~~~~~~~~~~l~---v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~--p~i~W~k~g~~l~~~~~ 718 (813)
.|..|..... ..|. +..+|.+... + .....+.+|+.++|.|.+.|.++ +.|+|+|||.+|..+..
T Consensus 329 ~n~~~~~~~~---~~v~~~~~~~~P~v~~~--~-----~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~ 398 (475)
T 1iga_A 329 AYPESKTPLT---ATLSKSGNTFRPEVHLL--P-----PPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKY 398 (475)
T ss_pred EcCCCCCceE---EEeecCCCCCCCeEEEE--C-----CChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCce
Confidence 9998864221 2332 2344433221 1 11123678999999999999743 49999999998865531
Q ss_pred ------ee---e-----cceEEEECCCCCCCCEEEEEEEEcCCCc
Q psy14896 719 ------FE---N-----FNRILTIPNVKVEDQGEYICRASNDRSA 749 (813)
Q Consensus 719 ------~~---~-----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 749 (813)
.. . ..+.|.|.....+|+|.|+|.|.|....
T Consensus 399 ~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 399 LTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred eecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 11 1 1246888888889999999999998643
No 55
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.97 E-value=9.7e-32 Score=295.25 Aligned_cols=365 Identities=15% Similarity=0.181 Sum_probs=203.8
Q ss_pred CCceeecCCCccccccEEEEeeeccCC--CCeEEEeecc--cccccccc-------cccccCCCccEEee------CCeE
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------GGNL 258 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g--~~l~~~~~-------~~~~~~~~~~~~~~------~~~l 258 (813)
|..+.+.+| ++++|.|.+.+.| .+.|.|||+. ..+..... .........|+.+. ..+|
T Consensus 7 ~~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 81 (457)
T 1hzh_H 7 SGAEVKKPG-----ASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYM 81 (457)
T ss_dssp CCCEEECTT-----CCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEE
T ss_pred CCceEEcCC-----CCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEE
Confidence 444666566 7799999998876 7899999963 22111000 00111223455543 1368
Q ss_pred EEcCCccccCCeeEEEEeecCce---------e--eEeeeeEEeeee----ecccccCCCCceeecCCCeEEEecCCCCC
Q psy14896 259 IINDPRQVEDRGSYHCKASNKFG---------S--IISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNY 323 (813)
Q Consensus 259 ~i~~~~~~~d~G~Y~C~a~n~~g---------~--~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~ 323 (813)
.|.+. +.+|+|.|+|.|.|..| . ..+..+.|.|.. +|.+........+.+|+.++|.|.+.+..
T Consensus 82 ~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~ 160 (457)
T 1hzh_H 82 ELRSL-RSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYF 160 (457)
T ss_dssp EECSC-CGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBB
T ss_pred EECCC-CcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEe
Confidence 88885 89999999999999865 1 123445666654 23333333334467889999999976555
Q ss_pred Cc-ceEEEeeccccccccCCccEEEccCc------cEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCccc-
Q psy14896 324 PG-VNYYWARDYFPNFVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ- 395 (813)
Q Consensus 324 p~-~~v~W~k~~~~~~~~~~~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~- 395 (813)
|. +.|+|+|++.++......+ ....++ .|.|.++..+| |.|+|.|.|..+..... ..+.+...+...
T Consensus 161 P~~~~v~W~k~~~~~~~~~~~~-~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~---~~v~~~~~~~~~~ 235 (457)
T 1hzh_H 161 PEPVTVSWNSGALTSGVHTFPA-VLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD---KKAEPKSCDKTHT 235 (457)
T ss_dssp SCCCEEEETTTTBCTTEEEEEE-EECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEE---EECCCCCSCSSCS
T ss_pred CCCeEEEEEeCCEeccceEcCc-eECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCccee---EEecccCCCcccc
Confidence 75 8999999997643221111 122333 69999999999 99999999976542111 222221111000
Q ss_pred --------ccccCCC-C-CCCCCcCCCCCCcEEEEEEEeecCCC----eeeEeecCCcCCCCceeccccceEEEcccccc
Q psy14896 396 --------QLKFPNN-F-PKTFPEAPKAGDKVRLECVAFGYPVP----SYNWTRRGSPLPRNAYFENFNRILTIPNVKMR 461 (813)
Q Consensus 396 --------~~~~~~~-~-~~~~~~~v~~g~~~~l~C~~~g~p~p----~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~ 461 (813)
....|.. . ++.....+.+|+.+.|.|.+.|.|++ .|.|+|++.++.....
T Consensus 236 ~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~---------------- 299 (457)
T 1hzh_H 236 CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKT---------------- 299 (457)
T ss_dssp CCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEE----------------
T ss_pred cCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCcccccccc----------------
Confidence 0000100 0 00000114556666666666665432 5666666554421100
Q ss_pred cceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeC---C--
Q psy14896 462 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIND---P-- 536 (813)
Q Consensus 462 g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~---~-- 536 (813)
.......++.+.+.. +
T Consensus 300 -----------------------------------------------------------~~~~~~~~g~~~~~~~l~i~~ 320 (457)
T 1hzh_H 300 -----------------------------------------------------------KPREEQYNSTYRVVSVLTVLH 320 (457)
T ss_dssp -----------------------------------------------------------EEEEECTTSCEEEEEEECCCH
T ss_pred -----------------------------------------------------------ccceecCCCcEEEEEEEEECH
Confidence 000011122332221 1
Q ss_pred CCCCCCceEEEEEEcCceeEE-eecEEE--EEeecccccccCCCc-eeccCCCceEEeCCCCCC-Cc-cEEEEccCCCCC
Q psy14896 537 RQVEDRGSYHCKASNKFGSII-SESVQL--AFGFIGEFNLKRAPE-IGNQNWGKAMFCDPPTNY-PG-VNYYWARDYFPN 610 (813)
Q Consensus 537 ~~~~d~G~Y~C~a~n~~g~~~-s~~~~l--~v~~~p~~~~~~~~~-~~~~g~~~~l~C~~~~~~-p~-~~v~W~k~~~~~ 610 (813)
...+|+|.|+|.|.|..+... ...+.+ .+..+|.+.+..... .+..|+ ++|.|.+ .|. |+ +.|+|+|||.++
T Consensus 321 ~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~-~g~~p~~~~v~W~k~g~~l 398 (457)
T 1hzh_H 321 QDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQ-VSLTCLV-KGFYPSDIAVEWESNGQPE 398 (457)
T ss_dssp HHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGGSSE-EEEEEEE-EEEBSSCCEEEEEETTEEC
T ss_pred HHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccCCCc-EEEEEEE-EeEECCCCEEEEEECCEEC
Confidence 123349999999998755421 111221 234555554443332 344555 9999999 564 33 499999999764
Q ss_pred cccCCCeEEEeeCcc------EEEEeecccCCeeEEEEEEeeec
Q psy14896 611 FVEEDKRVFVSYDGA------LYFSALEQIDAGNYSCNVQSKVS 648 (813)
Q Consensus 611 ~~~~~~~~~~~~~~~------L~i~~~~~~d~G~Y~C~a~n~~g 648 (813)
......+.....+|+ |.|.....+|+|.|+|.|.|...
T Consensus 399 ~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 442 (457)
T 1hzh_H 399 NNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 442 (457)
T ss_dssp CCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred cceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCC
Confidence 322222233345554 44555555789999999999763
No 56
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.97 E-value=8.8e-32 Score=282.85 Aligned_cols=264 Identities=18% Similarity=0.270 Sum_probs=135.1
Q ss_pred ccccCeEEEEEeecc-CCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEe
Q psy14896 480 SILNDITLSCYAGGY-PNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIIS 558 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~-p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s 558 (813)
.+|+.++|.|.+.+. |.+.|.|+|+|..+. ...++...+++|.|.++ ..+|+|.|+|.|.|. |.. +
T Consensus 21 ~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~----------~~~~~~~~~~~L~i~~v-~~~D~G~Y~C~a~n~-~~~-~ 87 (334)
T 1ry7_B 21 GSGDAVELSCPPPGGGPMGPTVWVKDGTGLV----------PSERVLVGPQRLQVLNA-SHEDSGAYSCRQRLT-QRV-L 87 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecCCcEEEEeeCCCCCCCcceEEEECCeeCC----------CcccEEeccceEEEeec-ccccCEEEEEEEEeC-CeE-E
Confidence 789999999999987 678999999996542 23344556789999997 999999999999998 554 4
Q ss_pred ecEEEEEeecc----------------------ccccc----CCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcc
Q psy14896 559 ESVQLAFGFIG----------------------EFNLK----RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV 612 (813)
Q Consensus 559 ~~~~l~v~~~p----------------------~~~~~----~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~ 612 (813)
..+.|.|...+ .+... .....+.+|+.++|.|.+ .|.|.+.|.|+|++.++..
T Consensus 88 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~-~g~p~~~v~W~~~~~~~~~ 166 (334)
T 1ry7_B 88 CHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPA-AGNPTPSISWLKNGREFRG 166 (334)
T ss_dssp -------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCC-CCSSCCEEECCBTTBCCCT
T ss_pred EEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEc-cCCCCCeEEEEECCEECcc
Confidence 44666665432 22111 112356789999999999 7889999999999976432
Q ss_pred cCCC-eEEE-eeCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeE
Q psy14896 613 EEDK-RVFV-SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV 690 (813)
Q Consensus 613 ~~~~-~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v 690 (813)
.... .... ...++|.|.+++.+|+|.|+|.|.|..|... ..+.|.|...+....... ...+....+.+|+++
T Consensus 167 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~---~~~~l~V~~~~~~~p~~~---~~~~~~~~~~~G~~v 240 (334)
T 1ry7_B 167 EHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIR---QTYTLDVLERSPHRPILQ---AGLPANQTAVLGSDV 240 (334)
T ss_dssp TSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEE---EEEEEEEECCCCSSCBCC---TTCSCCEEEESSCCE
T ss_pred cccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEE---EEEEEEEecCCCCCCceE---ecCCCceEEeCCCCE
Confidence 2111 1111 2345699999999999999999999987643 346777776432111100 001223567899999
Q ss_pred EEEEEecCCCCCeEEEEe----CCcccCCCce--e-----------eecceEEEECCCCCCCCEEEEEEEEcCCCceEEE
Q psy14896 691 RLECVAFGYPVPSYNWTR----RGSPLPRNAY--F-----------ENFNRILTIPNVKVEDQGEYICRASNDRSALESS 753 (813)
Q Consensus 691 ~l~C~~~g~P~p~i~W~k----~g~~l~~~~~--~-----------~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 753 (813)
+|.|.+.|.|.|.|+|+| ||..+..+.. + ....+.|.|.+++.+|+|.|+|.|.|..|..+.+
T Consensus 241 ~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 320 (334)
T 1ry7_B 241 EFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHS 320 (334)
T ss_dssp EECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEE
T ss_pred EEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEE
Confidence 999999999999999999 7777754332 1 1112479999999999999999999999999999
Q ss_pred EEEEEEcCCc
Q psy14896 754 VTISIQAEPN 763 (813)
Q Consensus 754 ~~l~V~~~P~ 763 (813)
+.|.|..+|.
T Consensus 321 ~~l~V~~~~~ 330 (334)
T 1ry7_B 321 AWLVVLPAEE 330 (334)
T ss_dssp EEEEEECSCC
T ss_pred EEEEEEECCC
Confidence 9999997664
No 57
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.97 E-value=1.3e-32 Score=300.11 Aligned_cols=372 Identities=12% Similarity=0.139 Sum_probs=217.6
Q ss_pred CCceeecCCCccccccEEEEeeeccCC--CCeEEEeecc--cccccccc-------cccccCCCccEEee------CCeE
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------GGNL 258 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g--~~l~~~~~-------~~~~~~~~~~~~~~------~~~l 258 (813)
|..+.+.+| ++++|.|.+.+.+ .+.|.|||++ ..+..... .........|+.+. +.+|
T Consensus 6 ~~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 80 (434)
T 1igy_B 6 SGAELARPG-----ASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANI 80 (434)
T ss_dssp CCCCEECTB-----CCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCE
T ss_pred CCCeEecCC-----CCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEE
Confidence 444566566 7799999998864 6799999984 22210000 00111123456543 2368
Q ss_pred EEcCCccccCCeeEEEEeecCceeeEeeeeEEeeee----ecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEEeec
Q psy14896 259 IINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARD 333 (813)
Q Consensus 259 ~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~k~ 333 (813)
.|.+. +.+|+|.|+|.|.|..+.. +..+.|.|.. +|.+........+.+|+.++|.|.+.+..|.+ .|+|+|+
T Consensus 81 ~I~~v-~~~D~G~Y~C~~~~~~~~~-~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~ 158 (434)
T 1igy_B 81 HLSSL-TSDDSAVYYCVREGEVPYW-GQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG 158 (434)
T ss_dssp EECSB-CGGGCSEECCCCSSSSCCC-CCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTT
T ss_pred EECCC-ChHHCEEEEEEEEcccccc-CCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeC
Confidence 88885 8999999999999965433 4456666653 23222222233456888999999975445776 9999999
Q ss_pred cccccccCCccEEE----ccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCccc----ccccCCCC-C
Q psy14896 334 YFPNFVEEDKRVFV----SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ----QLKFPNNF-P 404 (813)
Q Consensus 334 ~~~~~~~~~~~~~~----~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~----~~~~~~~~-~ 404 (813)
+..+.......... ...+.|.|.++..+| |.|+|.|.|..|..... ..+.+......+ ....|... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~---~~~~~~~~~~~v~~~~~~~~p~v~~~ 234 (434)
T 1igy_B 159 SLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVD---KKIVPRDCGCKPCICTVPEVSSVFIF 234 (434)
T ss_dssp TBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEE---EECCCCCCCCCCCCCCCSSSCCEEEE
T ss_pred CcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccce---eeccCCCCCCccccCCCCcCcEEEEe
Confidence 87632211111111 012468999999889 99999999988753211 222211000000 00001100 0
Q ss_pred CCCCcC-CCCCCcEEEEEEEeecC----CCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEeccccc
Q psy14896 405 KTFPEA-PKAGDKVRLECVAFGYP----VPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKR 479 (813)
Q Consensus 405 ~~~~~~-v~~g~~~~l~C~~~g~p----~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~ 479 (813)
+..... +.+|+.+.|.|.+.|.| .+.|.|+|++..+.......
T Consensus 235 ~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~-------------------------------- 282 (434)
T 1igy_B 235 PPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQP-------------------------------- 282 (434)
T ss_dssp CCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCC--------------------------------
T ss_pred CCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCc--------------------------------
Confidence 000011 77888888888888763 34778887776653211000
Q ss_pred ccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEE-e
Q psy14896 480 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSII-S 558 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~-s 558 (813)
........+ ...+.|.|.++ ..+|+|.|+|.|.|..|... .
T Consensus 283 ------------------------------------~~~~~~~~~-~~~~~L~i~~~-~~~d~G~Y~C~a~n~~~~~~~~ 324 (434)
T 1igy_B 283 ------------------------------------REEQFNSTF-RVVSALPIMHQ-DWLNGKEFKCRVNSAAFPAPIE 324 (434)
T ss_dssp ------------------------------------CCCCCSSSC-CCCCCEECCHH-HHHHTCCCBCCBCCSSCSSCCC
T ss_pred ------------------------------------ceeCCCCcE-EEEEEEEECHH-HccCCCcEEEEEECCCCCCcee
Confidence 000001111 12357888886 88999999999999988641 1
Q ss_pred ecEEE--EEeecccccccCCCceeccCCCceEEeCCCCC-CCc-cEEEEccCCCCCcccCCCeEEEeeCcc------EEE
Q psy14896 559 ESVQL--AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTN-YPG-VNYYWARDYFPNFVEEDKRVFVSYDGA------LYF 628 (813)
Q Consensus 559 ~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~p~-~~v~W~k~~~~~~~~~~~~~~~~~~~~------L~i 628 (813)
..+.+ .+..+|.+.+...+.....|..++|.|.+ .| +|+ +.|+|+|+|.++............+|+ |.|
T Consensus 325 ~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~-~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i 403 (434)
T 1igy_B 325 KTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMI-TDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLNV 403 (434)
T ss_dssp CCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEE-EEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEEEEE
T ss_pred EEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEE-EeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEEEEEE
Confidence 22222 34456665554444334456679999999 55 453 589999999874211101111134553 566
Q ss_pred EeecccCCeeEEEEEEeeecC
Q psy14896 629 SALEQIDAGNYSCNVQSKVSD 649 (813)
Q Consensus 629 ~~~~~~d~G~Y~C~a~n~~g~ 649 (813)
.....+|+|.|+|.|.|....
T Consensus 404 ~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 404 QKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp EHHHHHTTCCEEEEEEETTSG
T ss_pred CchhccCCCEEEEEEEcCCCC
Confidence 666678899999999998643
No 58
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.97 E-value=6.9e-31 Score=277.80 Aligned_cols=277 Identities=16% Similarity=0.163 Sum_probs=168.5
Q ss_pred ccccCeEEEEEeeccCC-----------CcEEEeeccccccceeccccC-CCCCceEEeeCCeEEEeCCCCCCCCceEEE
Q psy14896 480 SILNDITLSCYAGGYPN-----------PSYEWFKEDYVQDRLVANLID-PLSDKRFTLSGGNLIINDPRQVEDRGSYHC 547 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p~-----------~~v~W~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C 547 (813)
.+|+.+.|.|.+.+.|. +.|.|+|++....... .+. .....++...+++|.|.++ ..+|+|.|+|
T Consensus 20 ~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~--~~~~~~~~~~~~~~~~~L~i~~~-~~~D~G~Y~C 96 (349)
T 4dep_C 20 FEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEE--PINFRLPENRISKEKDVLWFRPT-LLNDTGNYTC 96 (349)
T ss_dssp ETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEE--ECCCCCGGGCEEEETTEEEESSC-CGGGCEEEEE
T ss_pred ecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccc--cccccccCceEeecCCEEEEccC-ChhhCEEEEE
Confidence 78999999999997664 9999999984321100 011 1123556677889999997 9999999999
Q ss_pred EEEcCceeEEeecEEEEEeeccccccc----CCCceeccCCCceEEeCC----CCCCCccEEEEccCCCCCcccCCCeEE
Q psy14896 548 KASNKFGSIISESVQLAFGFIGEFNLK----RAPEIGNQNWGKAMFCDP----PTNYPGVNYYWARDYFPNFVEEDKRVF 619 (813)
Q Consensus 548 ~a~n~~g~~~s~~~~l~v~~~p~~~~~----~~~~~~~~g~~~~l~C~~----~~~~p~~~v~W~k~~~~~~~~~~~~~~ 619 (813)
.|.|..|.... .+.|.|..++..... .....+.+|+.++|.|.+ ..+.|.+.|+|+|++.++ ....++.
T Consensus 97 ~a~n~~~~~~~-~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l--~~~~~~~ 173 (349)
T 4dep_C 97 MLRNTTYCSKV-AFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKI--QNFNNVI 173 (349)
T ss_dssp EEECSSCEEEE-EEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEEC--CSCSSEE
T ss_pred EEecCCceEEE-EEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEEC--CCcccee
Confidence 99999887643 477888765543222 123356789999999974 256899999999999763 3323332
Q ss_pred EeeCccEEEEeecccCCeeEEEEEEeee-cCccccCceeeEEEccCCCccccccCCCCCCCCC--cCCCCCCeEEEEEEe
Q psy14896 620 VSYDGALYFSALEQIDAGNYSCNVQSKV-SDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP--EAPKAGDKVRLECVA 696 (813)
Q Consensus 620 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~-g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~--~~~~~G~~v~l~C~~ 696 (813)
..+.+|.|.+++.+|+|.|+|.|.|.. |........+.|.|..++.... .|....+... ..+.+|++++|.|.+
T Consensus 174 -~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~--~p~i~~~~~~~~~~v~~G~~v~l~C~~ 250 (349)
T 4dep_C 174 -PEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAV--PPVIHSPNDHVVYEKEPGEELLIPCTV 250 (349)
T ss_dssp -EETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCC--SCEEC----------------CCCEEE
T ss_pred -ecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCC--CCeEecCCCceeEEEecCCcEEEEEEE
Confidence 233569999999999999999999998 4321223456677766432100 0111111111 267899999999999
Q ss_pred c----CCCCCeEEEEeCCcccCC-Cceee-------------ecceEEEECCCCCCCC-EEEEEEEEcCCCceEEEEEEE
Q psy14896 697 F----GYPVPSYNWTRRGSPLPR-NAYFE-------------NFNRILTIPNVKVEDQ-GEYICRASNDRSALESSVTIS 757 (813)
Q Consensus 697 ~----g~P~p~i~W~k~g~~l~~-~~~~~-------------~~~~~L~i~~v~~~d~-G~Y~C~a~N~~G~~~~~~~l~ 757 (813)
. |.|.|.|+|+|+|..+.. ..++. ...++|+|.+++.+|+ |.|+|.|.|..|..+..+.|.
T Consensus 251 ~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~ 330 (349)
T 4dep_C 251 YFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVK 330 (349)
T ss_dssp EECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC--
T ss_pred EEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEe
Confidence 9 678999999999998876 22211 1134599999999999 999999999999999999999
Q ss_pred EEc-CCccc
Q psy14896 758 IQA-EPNFT 765 (813)
Q Consensus 758 V~~-~P~~~ 765 (813)
|.. +|.+.
T Consensus 331 v~~~~p~~~ 339 (349)
T 4dep_C 331 QKVPAPRYT 339 (349)
T ss_dssp ---------
T ss_pred eecCCCCCc
Confidence 986 44443
No 59
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.97 E-value=3.2e-31 Score=279.10 Aligned_cols=279 Identities=17% Similarity=0.197 Sum_probs=206.9
Q ss_pred eEEeCCCceEecccccccccCeEEEEEee-------ccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCC
Q psy14896 464 YFIKQPTDVVFDLSKRSILNDITLSCYAG-------GYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDP 536 (813)
Q Consensus 464 y~~~~~~~~~~~~~~~~~g~~~~l~C~~~-------g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 536 (813)
++...|.+..+ .+|+.+.|.|.+. +.|.+.|.|+|+|..+. +......++...+++|.|.++
T Consensus 20 ~~~~~~~~~~v-----~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~------~~~~~~~~~~~~~~~L~i~~v 88 (339)
T 3o4o_C 20 FRGRHYKREFR-----LEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSART------VPGEEETRMWAQDGALWLLPA 88 (339)
T ss_dssp EEEECSCCEEE-----ETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSC------CSCCSSSCEEEETTEEEESSB
T ss_pred hhCcCceEEEE-----ECCccEEEEeccccccccccCCCCceEEEEECCCCcc------cCccccccEEeeCCeEEECCC
Confidence 34444555555 7899999999998 99999999999996521 122224566678899999997
Q ss_pred CCCCCCceEEEEEEcCceeEEeecEEEEEeeccccc--ccCCCceeccCCCceEEeCC----CCCCCccEEEEccCCCCC
Q psy14896 537 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN--LKRAPEIGNQNWGKAMFCDP----PTNYPGVNYYWARDYFPN 610 (813)
Q Consensus 537 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~--~~~~~~~~~~g~~~~l~C~~----~~~~p~~~v~W~k~~~~~ 610 (813)
..+|+|.|+|.|.|..|.. +..+.|.|..++... ....+..+.+|+.++|.|.+ ..+.|.+.|+|+|+|.++
T Consensus 89 -~~~D~G~Y~C~~~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~ 166 (339)
T 3o4o_C 89 -LQEDSGTYVCTTRNASYCD-KMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLL 166 (339)
T ss_dssp -CTTCCEEEECCEEETTEEE-EEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBC
T ss_pred -CcccCEEEEEEEECCcceE-EEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeC
Confidence 9999999999999998865 445778877665432 23334567889999999993 278899999999999864
Q ss_pred cccCCCeEEEeeC-ccEEEEeecccCCeeEEEEEEeeecCcc-ccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCC
Q psy14896 611 FVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTG-RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD 688 (813)
Q Consensus 611 ~~~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~ 688 (813)
.. ...++....+ ++|.|.+++.+|+|.|+|.|.|..|... .....+.|.|...+... .|..........+.+|+
T Consensus 167 ~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~---~P~i~~~~~~~~v~~G~ 242 (339)
T 3o4o_C 167 DK-DNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEET---IPVIISPLKTISASLGS 242 (339)
T ss_dssp CT-TCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCC---CCEECCCSCCCCCCCCS
T ss_pred CC-CCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCC---CCEEecCCceeEeccCC
Confidence 33 2345555544 5799999999999999999999987533 23445677777544211 11111223346789999
Q ss_pred eEEEEEEe---cCCC-CCeEEEEeCCcccCCCc---------eee-ecc------eEEEECCCCCCCC-EEEEEEEEcCC
Q psy14896 689 KVRLECVA---FGYP-VPSYNWTRRGSPLPRNA---------YFE-NFN------RILTIPNVKVEDQ-GEYICRASNDR 747 (813)
Q Consensus 689 ~v~l~C~~---~g~P-~p~i~W~k~g~~l~~~~---------~~~-~~~------~~L~i~~v~~~d~-G~Y~C~a~N~~ 747 (813)
+++|.|.+ .|.| .|.+.|+++|..+.... ++. ..+ +.|.|.+++.+|+ |.|+|.|.|.+
T Consensus 243 ~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~ 322 (339)
T 3o4o_C 243 RLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTL 322 (339)
T ss_dssp CCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETT
T ss_pred CEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEecc
Confidence 99999999 9999 88999999998875321 110 111 2799999999998 99999999999
Q ss_pred CceEEEEEEEEE
Q psy14896 748 SALESSVTISIQ 759 (813)
Q Consensus 748 G~~~~~~~l~V~ 759 (813)
|+++..+.|.+.
T Consensus 323 G~~~~~~~~~~~ 334 (339)
T 3o4o_C 323 SFQTLRTTVKEH 334 (339)
T ss_dssp EEECCBCCCCC-
T ss_pred CceEEEEEhhHh
Confidence 999888777654
No 60
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.97 E-value=7.2e-31 Score=288.31 Aligned_cols=320 Identities=17% Similarity=0.226 Sum_probs=200.3
Q ss_pred ccccCeEEEEEeeccC--CCcEEEeecc--ccccceec-------cccCCCCCceEEee------CCeEEEeCCCCCCCC
Q psy14896 480 SILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------GGNLIINDPRQVEDR 542 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p--~~~v~W~k~~--~~~~~~~~-------~~~~~~~~~~~~~~------~~~l~i~~~~~~~d~ 542 (813)
.+|+.++|.|.+.+.| .+.+.|+|+. +....+.. .........|+.+. ..+|.|.++ +.+|+
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v-~~~D~ 91 (457)
T 1hzh_H 13 KPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSL-RSADT 91 (457)
T ss_dssp CTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSC-CGGGC
T ss_pred cCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCC-CcccC
Confidence 7899999999999887 7889999953 22211110 00111223455442 137999997 99999
Q ss_pred ceEEEEEEcCce---------e--EEeecEEEEEee----cccccccCCCceeccCCCceEEeCCCCCCCc-cEEEEccC
Q psy14896 543 GSYHCKASNKFG---------S--IISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARD 606 (813)
Q Consensus 543 G~Y~C~a~n~~g---------~--~~s~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~v~W~k~ 606 (813)
|.|+|.|.|..| . .....+.|.|.. +|.+........+.+|+.++|.|.+....|. +.|+|+|+
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~ 171 (457)
T 1hzh_H 92 AVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSG 171 (457)
T ss_dssp EEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETTT
T ss_pred EEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEeC
Confidence 999999999865 1 122345666653 3333333333446789999999999533475 89999999
Q ss_pred CCCCcccCCCeEEEeeCc------cEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCcc---------ccc
Q psy14896 607 YFPNFVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ---------QLK 671 (813)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~------~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~---------~~~ 671 (813)
+.++.... .......++ .|.|.++..+| |.|+|.|.|..+.... ...+.+...+... ...
T Consensus 172 ~~~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~ 246 (457)
T 1hzh_H 172 ALTSGVHT-FPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV---DKKAEPKSCDKTHTCPPCPAPELLG 246 (457)
T ss_dssp TBCTTEEE-EEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEE---EEECCCCCSCSSCSCCSCCCCCCSS
T ss_pred CEeccceE-cCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcce---eEEecccCCCcccccCCCCCccccC
Confidence 96532111 111112233 58999999999 9999999998765321 1122221111000 000
Q ss_pred cCCC-C-CCCCCcCCCCCCeEEEEEEecCCCCC----eEEEEeCCcccCCCce---eeecceEEEECC---CCCCC---C
Q psy14896 672 FPNN-F-PKTFPEAPKAGDKVRLECVAFGYPVP----SYNWTRRGSPLPRNAY---FENFNRILTIPN---VKVED---Q 736 (813)
Q Consensus 672 ~p~~-~-~~~~~~~~~~G~~v~l~C~~~g~P~p----~i~W~k~g~~l~~~~~---~~~~~~~L~i~~---v~~~d---~ 736 (813)
.|.. . ++.....+.+|++++|.|.+.|.|++ .|+|+|+|.++..... ....++.|.|.. +..+| +
T Consensus 247 ~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~ 326 (457)
T 1hzh_H 247 GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG 326 (457)
T ss_dssp SCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHT
T ss_pred CceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCC
Confidence 0100 0 01111126789999999999998653 9999999988764421 112233333332 33455 9
Q ss_pred EEEEEEEEcCCCceEEEEEE----EEEcCCcccccC-CceeecCCCeEEEEEEEcccCCc--eEEEEECCEeccccc
Q psy14896 737 GEYICRASNDRSALESSVTI----SIQAEPNFTIPL-TDKHMDNQADLTWTCEAFGVPDV--TYSWFRNGELGHQMT 806 (813)
Q Consensus 737 G~Y~C~a~N~~G~~~~~~~l----~V~~~P~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~--~v~W~k~g~~l~~~~ 806 (813)
|.|+|.|.|..+.......| .+..+|.+...+ ....+..|+ ++|.|.+.|.|++ .|.|+|||++|..+.
T Consensus 327 G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 402 (457)
T 1hzh_H 327 KEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYK 402 (457)
T ss_dssp CCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCCEE
T ss_pred CcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECccee
Confidence 99999999986665444344 346778776443 333455566 9999999997544 899999999997543
No 61
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.97 E-value=6.8e-30 Score=265.54 Aligned_cols=281 Identities=18% Similarity=0.178 Sum_probs=189.8
Q ss_pred eeeCCCceeecCCCccccccEEEEeeeccCCCC-----eEEEeeccccccccccc---ccccCCCccEEe---------e
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNP-----SYEWFKEDYVQDRLVAN---LIDPLSDKRFTL---------S 254 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p-----~v~W~k~g~~l~~~~~~---~~~~~~~~~~~~---------~ 254 (813)
++..|.++.+..| ++++|.|.+.+.|.+ .|.|+|+|......... ........++.+ .
T Consensus 3 vv~~P~~v~~~~G-----~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 77 (313)
T 4fqp_A 3 VVQAPTQVPGFLG-----DSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELR 77 (313)
T ss_dssp EEECCSEECCBTT-----SCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCC
T ss_pred EEcCCCEEEEecC-----CCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCccc
Confidence 4455677776666 779999999886655 49999998653211100 001122223332 2
Q ss_pred CCeEEEcCCccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeecc
Q psy14896 255 GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDY 334 (813)
Q Consensus 255 ~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~ 334 (813)
+++|.|.+. +.+|+|.|+|.|.+..+...+..+.|.+...|.+........+..++...+.|.+..+.|.+.+.|++++
T Consensus 78 ~~sL~I~~v-~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~ 156 (313)
T 4fqp_A 78 NASLRMFGL-RVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDL 156 (313)
T ss_dssp BCCEEECSC-CGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETT
T ss_pred ceEEEECcC-ChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCC
Confidence 457888885 8999999999986543333367788888777776666666666777777899987788999999999999
Q ss_pred ccccccCCccEEEccCc------cEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCC
Q psy14896 335 FPNFVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408 (813)
Q Consensus 335 ~~~~~~~~~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~ 408 (813)
..+. ...+.....++ .|.|..+..+|+|.|+|.|.|..+.... +..+.|.|..+|.+... . ...
T Consensus 157 ~~~~--~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~-~~~~~l~V~~~P~v~~~-~------~~~ 226 (313)
T 4fqp_A 157 GGMP--NTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQ-LLTVNLTVYYPPEVSIS-G------YDN 226 (313)
T ss_dssp CCEE--EEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCE-EEEEECCBCEEEEEEEE-C------CCS
T ss_pred cccc--ccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccc-eeeeecccccCCccccc-c------ccc
Confidence 8742 22333333333 4888899999999999999997764332 22345556554432211 1 111
Q ss_pred cCCCCCCcEEEEEEEeecCCC-eeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEE
Q psy14896 409 EAPKAGDKVRLECVAFGYPVP-SYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITL 487 (813)
Q Consensus 409 ~~v~~g~~~~l~C~~~g~p~p-~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l 487 (813)
..+.+|+.++|.|.+.|+|.| .|+|+|++.++...
T Consensus 227 ~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~-------------------------------------------- 262 (313)
T 4fqp_A 227 NWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPF-------------------------------------------- 262 (313)
T ss_dssp CEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTT--------------------------------------------
T ss_pred eeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCc--------------------------------------------
Confidence 245567777777777777776 47777776655321
Q ss_pred EEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEee
Q psy14896 488 SCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 567 (813)
Q Consensus 488 ~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~ 567 (813)
....+++|.|.++ ..+|+|.|+|.|.|..|.. +..+.|.|.+
T Consensus 263 ------------------------------------~~~~~~~L~i~~v-~~~d~G~Y~C~a~N~~G~~-~~~~~l~V~~ 304 (313)
T 4fqp_A 263 ------------------------------------AVAQGAQLLIRPV-DKPINTTLICNVTNALGAR-QAELTVQVKE 304 (313)
T ss_dssp ------------------------------------EEEETTEEEECCC-SSCCEEEEEEEEECSSCEE-EEEEEEEEEC
T ss_pred ------------------------------------eEEeCCEEEECcC-ChhhCEEEEEEEEeCCCcE-EEEEEEEEEe
Confidence 1234568999997 9999999999999999987 4457888876
Q ss_pred ccc
Q psy14896 568 IGE 570 (813)
Q Consensus 568 ~p~ 570 (813)
+|+
T Consensus 305 ~PP 307 (313)
T 4fqp_A 305 GPP 307 (313)
T ss_dssp CC-
T ss_pred CCC
Confidence 654
No 62
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.97 E-value=3.6e-30 Score=264.51 Aligned_cols=255 Identities=17% Similarity=0.148 Sum_probs=188.4
Q ss_pred ccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEee
Q psy14896 480 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISE 559 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~ 559 (813)
.+|+.++|.|.+.+ .|.|++++.... .......+++|.|.++ ..+|+|.|+|.|.|..|.. +.
T Consensus 17 ~~G~~v~L~C~~~~----~v~W~~~~~~~~-----------~~~~~~~~~~L~i~~~-~~~d~G~Y~C~~~~~~~~~-~~ 79 (289)
T 3ejj_X 17 EPGETVTLRCVSNG----SVEWDGPISPYW-----------TLDPESPGSTLTTRNA-TFKNTGTYRCTELEDPMAG-ST 79 (289)
T ss_dssp CTTCCEEEEEECSS----CCEEECSCSSSS-----------EECCCSSCCEEEESSC-CGGGCEEEEEECCC------CE
T ss_pred CCCCCEEEEEEeCC----cEEEccCCCceE-----------EEeccCCccEEEEeee-ccccCEEEEEEEeccCCcc-ee
Confidence 68999999999988 599998874311 0111123468999997 9999999999999987774 55
Q ss_pred cEEEEEeeccc-ccccCCCceeccCCCceEEeCCCCCCCccE-EEEcc-CCCCCcccCCCeEEEeeCccEEEEeecccCC
Q psy14896 560 SVQLAFGFIGE-FNLKRAPEIGNQNWGKAMFCDPPTNYPGVN-YYWAR-DYFPNFVEEDKRVFVSYDGALYFSALEQIDA 636 (813)
Q Consensus 560 ~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~-v~W~k-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 636 (813)
.+.|.|..++. +........+.+|+.++|.|.+ .+.|.+. ++|++ ++.. +....++....+++|.|.++..+|+
T Consensus 80 ~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~-~~~~~~~~v~W~~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~d~ 156 (289)
T 3ejj_X 80 TIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLI-TDPALKDSVSLMREGGRQ--VLRKTVYFFSPWRGFIIRKAKVLDS 156 (289)
T ss_dssp EEEEEECCSSCSEEESCSEEEEETTSCEEECEEE-SCGGGGGSEEEEEGGGEE--CCTTCCEEEETTTEEEESSCCGGGC
T ss_pred EEEEEEeCCCcceecccceEEEecCCceEeEEEc-cCCCcceEEEEEecCCee--cCCCccEEECCCCCEEEeecccccC
Confidence 67888887765 3444556677889999999999 4655554 99986 5543 4456677788888999999999999
Q ss_pred eeEEEEEEeeecCccccCceeeEEEcc----CCCccccccCCCCCCCCCcCCCCCCeEEEEEEecC-CCCCeEEEEeCCc
Q psy14896 637 GNYSCNVQSKVSDTGRNGPFFPLKVFP----HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG-YPVPSYNWTRRGS 711 (813)
Q Consensus 637 G~Y~C~a~n~~g~~~~~~~~~~l~v~~----~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g-~P~p~i~W~k~g~ 711 (813)
|.|+|.|.|..+ ......+.|.|.. +|.+.. ......+.+|++++|.|.+.| .|.|.|+|+|+|.
T Consensus 157 G~Y~C~a~~~~~--~~~~~~~~l~V~~~~~~~p~i~~--------~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~ 226 (289)
T 3ejj_X 157 NTYVCKTMVNGR--ESTSTGIWLKVNRVHPEPPQIKL--------EPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDT 226 (289)
T ss_dssp EEEEEEEEETTE--EEECCCEEEEEESSCCCCCEEEE--------ESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTE
T ss_pred EEEEEEEEeCCC--ccccccEEEEEEECCCCCCeEEe--------cCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCE
Confidence 999999994322 2223447788873 333221 112245678999999999998 7999999999999
Q ss_pred ccCCCcee------eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCcc
Q psy14896 712 PLPRNAYF------ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNF 764 (813)
Q Consensus 712 ~l~~~~~~------~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~ 764 (813)
.+...... ....+.|.|.+++.+|+|.|+|.|.|..|..++++.|.+..++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~~~ 285 (289)
T 3ejj_X 227 KLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESHHH 285 (289)
T ss_dssp ECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC-----
T ss_pred EeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEecccc
Confidence 88764322 223568999999999999999999999999999999999887654
No 63
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.97 E-value=1.9e-30 Score=270.63 Aligned_cols=170 Identities=15% Similarity=0.200 Sum_probs=121.6
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccC-CCCeEEEeecccccccccccccccCCCccEEee--CCeEEEcCCc
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGY-PNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIINDPR 264 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~-P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~ 264 (813)
.+|.|.. |.+..+.+| ++++|.|.+.+. |.+.|.|||+|..+. .+.++.+. +.+|.|.+.
T Consensus 6 ~~P~~~~-~~~~~v~~G-----~~v~l~C~~~~~~p~~~v~W~~~~~~~~----------~~~~~~~~~~~~~L~i~~~- 68 (317)
T 2y25_A 6 TGPHFVE-YLSWEVTGE-----CNVLLKCKVANIKKETHIVWYKDEREIS----------VDEKHDFKDGICTLLITEF- 68 (317)
T ss_dssp SCCEEEE-EEEEEEETT-----TEEEEEEEEESCCTTCEEEEEETTEEEC----------CSCC-----CCEEEEETTC-
T ss_pred CCCcEee-eeeEEECCC-----CeEEEEEEEcCCCCCCEEEEEECCeEcC----------CCCcEEEECCeEEEEEccC-
Confidence 4688884 446777777 679999999887 889999999998763 22233332 347888875
Q ss_pred cccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecC---------CCCCCcceEEEeeccc
Q psy14896 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDP---------PTNYPGVNYYWARDYF 335 (813)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~---------~~~~p~~~v~W~k~~~ 335 (813)
+.+|+|.|+|.|.|..|.. +..+.|.|...+.+........+..|+.+.|.|.+ ..+.|.+.++|+|+|.
T Consensus 69 ~~~d~G~Y~C~~~n~~g~~-~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~ 147 (317)
T 2y25_A 69 SKKDAGIYEVILKDDRGKD-KSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGS 147 (317)
T ss_dssp CSTTCSCEEEEEESSSCEE-EEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSS
T ss_pred CcccCeEEEEEEECCCCcE-EEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCE
Confidence 8999999999999999976 55566766555443333333344455566666653 3337999999999998
Q ss_pred cccccCCccEEEccCc---cEEEeeeeecCCeeeEEEEeeecccc
Q psy14896 336 PNFVEEDKRVFVSYDG---ALYFSALEQIDAGNYSCNVQSKVSDT 377 (813)
Q Consensus 336 ~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~n~~g~~ 377 (813)
++. ...++.+...+ .|.|.+++.+|+|.|+|.|.|..|..
T Consensus 148 ~~~--~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 190 (317)
T 2y25_A 148 AIR--YSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGH 190 (317)
T ss_dssp BCC--CCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEE
T ss_pred ECC--CCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceE
Confidence 853 34455544443 49999999999999999999977643
No 64
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.97 E-value=2.3e-29 Score=277.44 Aligned_cols=320 Identities=14% Similarity=0.147 Sum_probs=204.4
Q ss_pred ccccCeEEEEEeeccC--CCcEEEeecc--ccccceecc-------ccCCCCCceEEee------CCeEEEeCCCCCCCC
Q psy14896 480 SILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVAN-------LIDPLSDKRFTLS------GGNLIINDPRQVEDR 542 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p--~~~v~W~k~~--~~~~~~~~~-------~~~~~~~~~~~~~------~~~l~i~~~~~~~d~ 542 (813)
.+|+.++|.|.+.+.+ .+.+.|||.. +....+... ........|+.+. ..+|.|.++ +.+|+
T Consensus 14 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v-~~~D~ 92 (475)
T 1iga_A 14 KPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSL-RPEDT 92 (475)
T ss_pred eCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCC-ChhhC
Confidence 7899999999998865 6789999963 222111100 0011123455442 247999997 99999
Q ss_pred ceEEEEEEcCcee-----EEeecEEEEEee----cccccccCCCceeccCCCceEEeCCCCCCCc-c-EEEEccCCCCCc
Q psy14896 543 GSYHCKASNKFGS-----IISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-V-NYYWARDYFPNF 611 (813)
Q Consensus 543 G~Y~C~a~n~~g~-----~~s~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~-~v~W~k~~~~~~ 611 (813)
|.|.|.+.|..|. .....+.|.|.. +|.+.... +....+|+.++|.|.+....|. + .|+|++++....
T Consensus 93 G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~-~~~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~ 171 (475)
T 1iga_A 93 AVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLS-LCSTQPDGNVVIACLVQGFFPQEPLSVTWSESGQGVT 171 (475)
T ss_pred EEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecC-ccccCCCCeEEEEEEEeeecCCCceEEEEcCCCcccc
Confidence 9999999998652 223345676653 23222221 2223689999999999433465 4 999999985421
Q ss_pred ccCCCeEEEeeC------ccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCcc----------ccccCCC
Q psy14896 612 VEEDKRVFVSYD------GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ----------QLKFPNN 675 (813)
Q Consensus 612 ~~~~~~~~~~~~------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~----------~~~~p~~ 675 (813)
...........+ +.|.|..+..+|+|.|+|.|.|..+.. ....+.|.|...+... ....|..
T Consensus 172 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~--~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v 249 (475)
T 1iga_A 172 ARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS--QDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRL 249 (475)
T ss_pred eEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCc--eeeeEecccccCcccccccccccCCCCCCCcEE
Confidence 111111110122 248888888899999999999998632 1222333332211100 0000110
Q ss_pred -CCCCCCcCCCCCCeEEEEEEecCCCC---CeEEEEeCCcccCCCce-----e----eecceEEEECCCCCCCCEEEEEE
Q psy14896 676 -FPKTFPEAPKAGDKVRLECVAFGYPV---PSYNWTRRGSPLPRNAY-----F----ENFNRILTIPNVKVEDQGEYICR 742 (813)
Q Consensus 676 -~~~~~~~~~~~G~~v~l~C~~~g~P~---p~i~W~k~g~~l~~~~~-----~----~~~~~~L~i~~v~~~d~G~Y~C~ 742 (813)
...+....+.+|++++|.|.+.|.|+ +.|+| ++..+..... . ....+.|.|.++..+|+|.|+|.
T Consensus 250 ~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~ 327 (475)
T 1iga_A 250 SLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCT 327 (475)
T ss_pred EEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEE
Confidence 01111123689999999999998754 69999 4444432110 0 01345799999999999999999
Q ss_pred EEcCCCceEEEEEEE---EEcCCcccccC-CceeecCCCeEEEEEEEcccCC--ceEEEEECCEecccc
Q psy14896 743 ASNDRSALESSVTIS---IQAEPNFTIPL-TDKHMDNQADLTWTCEAFGVPD--VTYSWFRNGELGHQM 805 (813)
Q Consensus 743 a~N~~G~~~~~~~l~---V~~~P~~~~~~-~~~~~~~g~~~~l~C~~~g~p~--~~v~W~k~g~~l~~~ 805 (813)
|.|..|.......|. +..+|.+...+ ....+.+|+.++|.|.+.|.++ +.|.|+|||++|..+
T Consensus 328 a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 396 (475)
T 1iga_A 328 AAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPRE 396 (475)
T ss_pred EEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCC
Confidence 999999876655664 35778765433 3334778999999999999643 599999999999765
No 65
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.97 E-value=3.1e-30 Score=268.30 Aligned_cols=259 Identities=14% Similarity=0.165 Sum_probs=186.6
Q ss_pred ccccCeEEEEEee-ccCCCcEEEeeccccccceeccccCCCCCceEEe--eC--CeEEEeCCCCCCCCceEEEEEEcCce
Q psy14896 480 SILNDITLSCYAG-GYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL--SG--GNLIINDPRQVEDRGSYHCKASNKFG 554 (813)
Q Consensus 480 ~~g~~~~l~C~~~-g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~--~~--~~l~i~~~~~~~d~G~Y~C~a~n~~g 554 (813)
.+|+.+.|.|.+. +.|.+.|.|+|++..+. . ..++.+ .+ .+|.|.++ ..+|+|.|+|.|.|..|
T Consensus 14 ~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~--------~--~~~~~~~~~~~~~~L~I~~~-~~~D~G~Y~C~~~n~~g 82 (312)
T 2y23_A 14 DDDGVISLNFECDKMTPKSEFSWSKDYVSTE--------D--SPRLEVESKGNKTKMTFKDL-GMDDLGIYSCDVTDTDG 82 (312)
T ss_dssp CTTCCEEEEEECSSCCTTCCEEEEETTEECT--------T--CTTEEEEEETTEEEEEESSC-CGGGCEEEEEEESSSCC
T ss_pred ecCCeEEEEEEEeCCCCCcEEEEEECCEECC--------C--CCCEEEEEeCCEEEEEECcC-CccCCEEEEEEEEeCCC
Confidence 6789999999985 68999999999997642 1 223333 23 58999997 99999999999999888
Q ss_pred eEEeecEEEEEee------------cccccccCC-CceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEe
Q psy14896 555 SIISESVQLAFGF------------IGEFNLKRA-PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS 621 (813)
Q Consensus 555 ~~~s~~~~l~v~~------------~p~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~ 621 (813)
... ...+.|.. +|.+..... ...+.+|+.++|.|.+..+.|.+.++|+|++.+ +....++.+.
T Consensus 83 ~~~--s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~--i~~~~~~~~~ 158 (312)
T 2y23_A 83 IAS--SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKE--IFEGPKYKMH 158 (312)
T ss_dssp CCE--EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEE--ECSSSSCEEE
T ss_pred cEE--EEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEE--CeeCCcEEEE
Confidence 643 34555542 444433332 566788999999999954899999999999976 3344444444
Q ss_pred eCc-----cEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCC-------------ccccccCCCCCCCCCcC
Q psy14896 622 YDG-----ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN-------------FQQLKFPNNFPKTFPEA 683 (813)
Q Consensus 622 ~~~-----~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~-------------~~~~~~p~~~~~~~~~~ 683 (813)
.+. +|.|.+++.+|+|.|+|.|.|..+.. ...+.+..... ......|.+. ......
T Consensus 159 ~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~ 232 (312)
T 2y23_A 159 IDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATN-----HSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFV-EYLSWE 232 (312)
T ss_dssp EETTTTEEEEEESCCCGGGCEEEEEEEESSSCEE-----EEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEE-EEEEEE
T ss_pred EccCCCEEEEEEccCCcccCEeEEEEEEeCCceE-----EEEEEEcchhhhhhcccccccccchhhccCCcee-ecceEE
Confidence 332 29999999999999999997643221 12233311000 0000001110 111246
Q ss_pred CCCCCeEEEEEEecCCCCC-eEEEEeCCcccCCCceee--ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEE
Q psy14896 684 PKAGDKVRLECVAFGYPVP-SYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 759 (813)
Q Consensus 684 ~~~G~~v~l~C~~~g~P~p-~i~W~k~g~~l~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 759 (813)
+.+|++++|.|.+.|.|+| .|+|+|+|..+..+.++. .....|.|.+++.+|+|.|+|.|.|..|..++++.|+|+
T Consensus 233 v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 233 VTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp EETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred EeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 7899999999999999998 999999999987544332 334689999999999999999999999999999999875
No 66
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.97 E-value=4.7e-29 Score=256.16 Aligned_cols=272 Identities=17% Similarity=0.257 Sum_probs=198.0
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
.+|.|...+.+..+.+| ++++|.|.+.| .|.|+|+|..+ ......+++|.|.+. +.+
T Consensus 11 ~~P~i~~~~~~~~v~~G-----~~v~l~C~~~~----~i~W~~~~~~~-------------~~~~~~~~~L~i~~~-~~~ 67 (290)
T 2o26_X 11 SPPSIHPAQSELIVEAG-----DTLSLTCIDPD----FVRWTFKTYFN-------------EMVENKKNEWIQEKA-EAT 67 (290)
T ss_dssp -CCEESSCSSEEEEETT-----SCEEEEEECTT----EEEEEEECSSS-------------CEEEECSSEEEETTC-CGG
T ss_pred CCCEEeCCCCeEEEcCC-----CcEEEEECCCC----cEEEecCCcce-------------eeecCCCceEEEecc-CHH
Confidence 46889888888888887 66999999988 99999999754 111223467888875 899
Q ss_pred CCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCc-ceEEE-eeccccccccCCccE
Q psy14896 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYW-ARDYFPNFVEEDKRV 345 (813)
Q Consensus 268 d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~v~W-~k~~~~~~~~~~~~~ 345 (813)
|+|.|+|.|.| |. +..+.|.|..+|.+........+.+|+.++|.|.+. + |. +.++| ++||.++ ....++
T Consensus 68 d~G~Y~C~~~n--g~--~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~-p~~~~v~W~~~~g~~l--~~~~~~ 139 (290)
T 2o26_X 68 RTGTYTCSNSN--GL--TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLT-D-PQVSQYSLIECDGKSL--PTDLTF 139 (290)
T ss_dssp GCEEEEEEESS--SC--EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBS-C-CSCEEEEEEETTSCCC--CTTCEE
T ss_pred hCeEEEEEeeC--Cc--cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCC-C-CCCceEEEEeCCCcCC--CCCCce
Confidence 99999999999 54 567888888777766666677788999999999975 4 87 99999 5788764 456677
Q ss_pred EEccCccEEEeeeeecCCe-eeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEe
Q psy14896 346 FVSYDGALYFSALEQIDAG-NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF 424 (813)
Q Consensus 346 ~~~~~~~L~i~~v~~~D~G-~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~ 424 (813)
....++.|.|.++..+|+| .|+|.|.|..+. ..+..+.|.|...+. .+|..........+.+|+.+.|.|.+.
T Consensus 140 ~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~--~~s~~~~l~V~~~~~----~~P~i~~~~~~~~v~~G~~v~l~C~~~ 213 (290)
T 2o26_X 140 VPNPKAGITIKNVKRAYHRLCVRCAAQRDGTW--LHSDKFTLKVREAIK----AIPVVSVPETSHLLKKGDTFTVVCTIK 213 (290)
T ss_dssp EEETTTEEEEESCCGGGTTCEEEEEEEETTEE--EECCCEEEEEECCCC----SCCEEECSCSBCCCCTTCCEEEEEEEE
T ss_pred eeCCCCCEEEecccHHHCCCEEEEEEEECCce--EEeEEEEEEEEeCCC----CCCccccCCCcceEecCCcEEEEEEEe
Confidence 7777889999999999999 999999997443 223347777763111 011111112234789999999999999
Q ss_pred ecCCCe-eeEeecCCcCC----CCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcE
Q psy14896 425 GYPVPS-YNWTRRGSPLP----RNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSY 499 (813)
Q Consensus 425 g~p~p~-i~W~~~~~~l~----~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v 499 (813)
|.|.|. +.|++++..+. ....
T Consensus 214 g~p~p~~i~W~~~~~~~~~~~~~~~~------------------------------------------------------ 239 (290)
T 2o26_X 214 DVSTSVNSMWLKMNPQPQHIAQVKHN------------------------------------------------------ 239 (290)
T ss_dssp ESSTTCEEEEEEESSSEEECCCEECC------------------------------------------------------
T ss_pred cCCcceeEEEecCCCCCccceeeccc------------------------------------------------------
Confidence 999996 99999987741 1000
Q ss_pred EEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecc
Q psy14896 500 EWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG 569 (813)
Q Consensus 500 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p 569 (813)
..+.+ .......+.|.|.++ ..+|+|.|+|.|.|..|.. +..+.|.|..+|
T Consensus 240 ~~~~~-----------------~~~~~~~~~L~I~~v-~~~d~G~Y~C~a~N~~g~~-~~~~~l~V~~~P 290 (290)
T 2o26_X 240 SWHRG-----------------DFNYERQETLTISSA-RVDDSGVFMCYANNTFGSA-NVTTTLKVVEKG 290 (290)
T ss_dssp EEEEE-----------------TTEEEEEEEEEESSC-CSSSCEEEEEEEECSSCEE-EEEEEECC----
T ss_pred ccccC-----------------ceeeEEEEEEEEcCC-CcccCeEEEEEEeCCCCcE-EEEEEEEEEeCC
Confidence 00000 001123458999997 9999999999999999988 455777766543
No 67
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.97 E-value=1.1e-29 Score=256.97 Aligned_cols=243 Identities=15% Similarity=0.182 Sum_probs=183.5
Q ss_pred cccccCeEEEEEeec-cCCC--cEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCC--CCCCCCce--EEEEEEc
Q psy14896 479 RSILNDITLSCYAGG-YPNP--SYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDP--RQVEDRGS--YHCKASN 551 (813)
Q Consensus 479 ~~~g~~~~l~C~~~g-~p~~--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~--~~~~d~G~--Y~C~a~n 551 (813)
+.+|+.++|.|.+.| .|.+ .|+|+|+|..+.. .....+..+.+... ...+|+|. |+|.|.|
T Consensus 15 v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~------------~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n 82 (265)
T 2oz4_A 15 LEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP------------TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVIL 82 (265)
T ss_dssp EETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC------------EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEE
T ss_pred EecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc------------eEeeCCCeEEEEeecccccccCCcceEEEEEec
Confidence 478999999999999 8877 9999999965421 33444555655442 15678774 9999999
Q ss_pred CceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEee
Q psy14896 552 KFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSAL 631 (813)
Q Consensus 552 ~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~ 631 (813)
..|.. +..+.|.|...|.+.+......+.+|+.++|.|.+. |.+.|+| +|.++.. .. ..+.|.|..+
T Consensus 83 ~~~~~-~~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~---p~~~i~W--~g~~~~~--~~-----~~~~l~i~~~ 149 (265)
T 2oz4_A 83 GNQSQ-ETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH---PRAKVTL--NGVPAQP--LG-----PRAQLLLKAT 149 (265)
T ss_dssp TTEEE-EEEEEEEEECCCCCEEEESCSEEETTCEEEEEEECC---TTSEEEE--SSCSSSC--CS-----SEECCEEECC
T ss_pred CCCCc-EEEEEEEEeCCCCceeecCCceecCCCcEEEEEEcc---CCCEEEE--CCEEccC--CC-----CcEEEEEccc
Confidence 98886 455788886644444444566678899999999983 8999999 7765411 11 2356899999
Q ss_pred cccCCeeEEEEEEeee-cCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCC
Q psy14896 632 EQIDAGNYSCNVQSKV-SDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRG 710 (813)
Q Consensus 632 ~~~d~G~Y~C~a~n~~-g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g 710 (813)
..+|+|.|+|.|.|.. |........+.|.|..+|.+.....| ....+.+|+.++|.|.+.|+|.|.|+|+|+|
T Consensus 150 ~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p------~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~ 223 (265)
T 2oz4_A 150 PEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCP------GNWTWPENSQQTPMCQAWGNPLPELKCLKDG 223 (265)
T ss_dssp GGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSC------SEEEEETTCEECCCCCCEEESCCEEEEEETT
T ss_pred cccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCC------CccEEcCCCeEEEEeECccCCCCeEEEEECC
Confidence 9999999999998765 65544445678899888876443222 1246789999999999999999999999999
Q ss_pred cccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcC
Q psy14896 711 SPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 761 (813)
Q Consensus 711 ~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 761 (813)
..+... ..|. .++.+|+|.|+|+|.|..|..+.++.|.|+.|
T Consensus 224 ~~~~~~-------g~~~--~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~p 265 (265)
T 2oz4_A 224 TFPLPI-------GESV--TVTRDLEGTYLCRARSTQGEVTREVTVNVLSP 265 (265)
T ss_dssp TEECCT-------TSCE--ECCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred cccCCC-------CcEE--EeehhhCeEEEEEEECCCCcEEEEEEEEEecC
Confidence 833222 1222 37889999999999999999999999999864
No 68
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.97 E-value=3.5e-30 Score=271.23 Aligned_cols=238 Identities=16% Similarity=0.203 Sum_probs=181.6
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeec-------cCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEE
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAG-------GYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLII 260 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~-------g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i 260 (813)
..|.|...|.+..+.+| +++.|.|.+. +.|.+.|.|+|+|..+. +......++...+++|.|
T Consensus 17 ~~p~~~~~~~~~~v~~G-----~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~------~~~~~~~~~~~~~~~L~i 85 (339)
T 3o4o_C 17 SCRFRGRHYKREFRLEG-----EPVALRCPQVPYWLWASVSPRINLTWHKNDSART------VPGEEETRMWAQDGALWL 85 (339)
T ss_dssp -CEEEEECSCCEEEETT-----BCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSC------CSCCSSSCEEEETTEEEE
T ss_pred hhHhhCcCceEEEEECC-----ccEEEEeccccccccccCCCCceEEEEECCCCcc------cCccccccEEeeCCeEEE
Confidence 45889999999999888 6699999998 89999999999997641 122225566777899999
Q ss_pred cCCccccCCeeEEEEeecCceeeEeeeeEEeeeeecccc--cCCCCceeecCCCeEEEecC----CCCCCcceEEEeecc
Q psy14896 261 NDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN--LKRAPEIGNQNWGKAMFCDP----PTNYPGVNYYWARDY 334 (813)
Q Consensus 261 ~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~--~~~~~~~~~~~~~~~l~C~~----~~~~p~~~v~W~k~~ 334 (813)
.+. +.+|+|.|+|.|.|..|.. +..+.|.|...+... ....+..+.+|+.++|.|.+ ..|.|.+.+.|+|+|
T Consensus 86 ~~v-~~~D~G~Y~C~~~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g 163 (339)
T 3o4o_C 86 LPA-LQEDSGTYVCTTRNASYCD-KMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDS 163 (339)
T ss_dssp SSB-CTTCCEEEECCEEETTEEE-EEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESS
T ss_pred CCC-CcccCEEEEEEEECCcceE-EEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCC
Confidence 885 8999999999999998866 677888887665533 22344577889999999995 578899999999999
Q ss_pred ccccccCCccEEEccC-ccEEEeeeeecCCeeeEEEEeeeccccCC-CCCceeeEEccCCcccccccCCCCCCCCCcCCC
Q psy14896 335 FPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGR-NGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK 412 (813)
Q Consensus 335 ~~~~~~~~~~~~~~~~-~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~-~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~ 412 (813)
.++.. ...++....+ +.|.|.++..+|+|.|+|.|.|..|.... .+..+.|.|...+.. .+|....+.....+.
T Consensus 164 ~~~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~---~~P~i~~~~~~~~v~ 239 (339)
T 3o4o_C 164 LLLDK-DNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEE---TIPVIISPLKTISAS 239 (339)
T ss_dssp CBCCT-TCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCC---CCCEECCCSCCCCCC
T ss_pred eeCCC-CCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCC---CCCEEecCCceeEec
Confidence 88643 3345555544 58999999999999999999998874332 234577777654321 122222223345789
Q ss_pred CCCcEEEEEEE---eecC-CCeeeEeecCCcCCC
Q psy14896 413 AGDKVRLECVA---FGYP-VPSYNWTRRGSPLPR 442 (813)
Q Consensus 413 ~g~~~~l~C~~---~g~p-~p~i~W~~~~~~l~~ 442 (813)
+|+.+.|.|.+ .|+| .+.+.|++++.++..
T Consensus 240 ~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~ 273 (339)
T 3o4o_C 240 LGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIES 273 (339)
T ss_dssp CCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSS
T ss_pred cCCCEEEEEEEECCCCCCCCceEEEEECCeeccc
Confidence 99999999999 8888 789999999888754
No 69
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.97 E-value=5.3e-30 Score=268.94 Aligned_cols=268 Identities=18% Similarity=0.213 Sum_probs=193.3
Q ss_pred ccccCeEEEEEeecc----CCCcEEEeeccccccceec-------cccCCCCCceEEee-----CCeEEEeCCCCCCCCc
Q psy14896 480 SILNDITLSCYAGGY----PNPSYEWFKEDYVQDRLVA-------NLIDPLSDKRFTLS-----GGNLIINDPRQVEDRG 543 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~----p~~~v~W~k~~~~~~~~~~-------~~~~~~~~~~~~~~-----~~~l~i~~~~~~~d~G 543 (813)
.+|+.++|.|.+.+. |.+.+.|+|++........ .........++.+. +++|.|.++ +.+|+|
T Consensus 27 ~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v-~~~D~G 105 (331)
T 3u83_A 27 FIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRL-ELEDEG 105 (331)
T ss_dssp ETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECSC-CGGGCE
T ss_pred EecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEccc-CcccCc
Confidence 789999999999886 4557999996632111000 01122233455442 468999997 999999
Q ss_pred eEEEE-EEcCceeEEeecEEEEEeecccccc--cCCCceeccC---CCceEEeCCCCCCCccEEEEccCCCCCcccCCCe
Q psy14896 544 SYHCK-ASNKFGSIISESVQLAFGFIGEFNL--KRAPEIGNQN---WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKR 617 (813)
Q Consensus 544 ~Y~C~-a~n~~g~~~s~~~~l~v~~~p~~~~--~~~~~~~~~g---~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~ 617 (813)
.|+|. +.+..|.. +..+.|.|..+|.+.. ......+.+| +.++|.|.+..+.|.+.++|+|++..... ..
T Consensus 106 ~Y~C~~~~~~~~~~-~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~---~~ 181 (331)
T 3u83_A 106 VYICEFATFPTGNR-ESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAE---YQ 181 (331)
T ss_dssp EEEEEEEEETTEEE-EEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEE---EE
T ss_pred EEEEEEEecCCCcc-EEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccc---cc
Confidence 99998 55556654 5568888888776543 3334455666 66899998437899999999997432111 11
Q ss_pred EEEeeCc------cEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEE
Q psy14896 618 VFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVR 691 (813)
Q Consensus 618 ~~~~~~~------~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~ 691 (813)
.....++ .|.|.++..+|+|.|+|.|.|..|... ..+.|.|..+|.+... ......+.+|++++
T Consensus 182 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~---~~~~l~V~~~P~~~~~-------~~~~~~~~~g~~~~ 251 (331)
T 3u83_A 182 EIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFK---ESLTLNVQYEPEVTIE-------GFDGNWYLQRMDVK 251 (331)
T ss_dssp EEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEE---EEEECCEEEEEEEEEE-------CCCSCCBTTCCCEE
T ss_pred eeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcce---eeEEEEEecCCeEEEe-------cCCCceEeCCCeEE
Confidence 1122233 377777799999999999999987543 3477788777754422 11224578999999
Q ss_pred EEEEecCCCCCe-EEEEeCCcccCCCceeeecceEEEEC-CCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCcc
Q psy14896 692 LECVAFGYPVPS-YNWTRRGSPLPRNAYFENFNRILTIP-NVKVEDQGEYICRASNDRSALESSVTISIQAEPNF 764 (813)
Q Consensus 692 l~C~~~g~P~p~-i~W~k~g~~l~~~~~~~~~~~~L~i~-~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~ 764 (813)
|.|.+.|.|.|. |+|+|++..+.....+ .+++|.|. +++.+|+|.|+|.|.|.+|..+.++.|.|...+..
T Consensus 252 l~C~~~g~p~p~~i~W~~~~~~~~~~~~~--~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 324 (331)
T 3u83_A 252 LTCKADANPPATEYHWTTLNGSLPKGVEA--QNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAAAL 324 (331)
T ss_dssp EEEEEEEESCCCEEEEEETTBSCCTTEEE--ETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC----
T ss_pred EEEeCcCCCCCCEEEEEECCCccccccee--cCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccchh
Confidence 999999999998 9999999998766443 35789999 99999999999999999999999999999987654
No 70
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.97 E-value=6.9e-30 Score=265.92 Aligned_cols=286 Identities=15% Similarity=0.193 Sum_probs=194.3
Q ss_pred ceeecCCCccccccEEEEeeeccCC-CCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccCCeeEEEEe
Q psy14896 198 DVVFDLSKRSILNDITLSCYAGGYP-NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKA 276 (813)
Q Consensus 198 ~~~v~~g~~~~g~~v~l~C~~~g~P-~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a 276 (813)
.+.+.+| +++.|.|.+.|.| .+.|.|||+|..+. +......++...+++|.|.+. +.+|+|.|+|.|
T Consensus 14 ~~~v~~G-----~~v~L~C~~~~~~~~~~v~W~k~~~~~~------~~~~~~~~~~~~~~~L~i~~v-~~~D~G~Y~C~a 81 (315)
T 1itb_B 14 ILVSSAN-----EIDVRPCPLNPNEHKGTITWYKDDSKTP------VSTEQASRIHQHKEKLWFVPA-KVEDSGHYYCVV 81 (315)
T ss_dssp CCEEETT-----SCCCCBCCCCSCCCSSCCCEECTTSCSC------SCCCTTSSSEECSSBEECTTC-CGGGCSCCEECC
T ss_pred EEEEcCC-----CcEEEEeeccCcCCCceEEEEeCCCcCc------cccccCCcEeccCCeEEECCC-ChhhCEEEEEEE
Confidence 4566566 7799999999887 88999999997541 223445667777888988885 899999999999
Q ss_pred ecCceeeEeeeeEEeeee-ecccccCC---CCceeecCCCeEEEecCC-----CCCCcceEEEeeccccccccCCccEEE
Q psy14896 277 SNKFGSIISESVQLAFGF-IGEFNLKR---APEIGNQNWGKAMFCDPP-----TNYPGVNYYWARDYFPNFVEEDKRVFV 347 (813)
Q Consensus 277 ~n~~g~~~s~~~~l~v~~-~~~~~~~~---~~~~~~~~~~~~l~C~~~-----~~~p~~~v~W~k~~~~~~~~~~~~~~~ 347 (813)
.|..|.. ...+.+.+.. +|.+.... ....+..|+.+.|.|.+. .|.|.+.++|+|++.++.. ...++ .
T Consensus 82 ~n~~g~~-~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~-~~~~~-~ 158 (315)
T 1itb_B 82 RNSSYCL-RIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL-DNIHF-S 158 (315)
T ss_dssp CSSSCCC-CEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCC-CSSSE-E
T ss_pred eCCceEE-EEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCC-ccceE-e
Confidence 9998865 3344444332 23332221 234677899999999962 7899999999999988643 22333 4
Q ss_pred ccCccEEEeeeeecCCeeeEEEEe-eeccccCCCCCceeeEEccCCcccccccCCCCCCCC-CcCCCCCCcEEEEEEEee
Q psy14896 348 SYDGALYFSALEQIDAGNYSCNVQ-SKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF-PEAPKAGDKVRLECVAFG 425 (813)
Q Consensus 348 ~~~~~L~i~~v~~~D~G~Y~C~a~-n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~~l~C~~~g 425 (813)
..++.|.|.+++.+|+|.|+|.|. |..|.....+..+.+.+..... ...|....+.. ...+.+|+.+.|.|.+.|
T Consensus 159 ~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~---~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g 235 (315)
T 1itb_B 159 GVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENK---PTRPVIVSPANETMEVDLGSQIQLICNVTG 235 (315)
T ss_dssp EETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCC---CCCCEECSCCSEEEECCSSSCEEEEEEEEE
T ss_pred ecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCC---CCCCEEecCCCCcEEEeCCCcEEEEEEEec
Confidence 456799999999999999999999 7776543222234443432111 11111111111 246899999999999999
Q ss_pred cCCCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeecc
Q psy14896 426 YPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED 505 (813)
Q Consensus 426 ~p~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~ 505 (813)
.|.|.+.|+++|..+.......... ...
T Consensus 236 ~P~p~i~W~~~g~~i~~~~~~~~~~-~~~--------------------------------------------------- 263 (315)
T 1itb_B 236 QLSDIAYWKWNGSVIDEDDPVLGED-YYS--------------------------------------------------- 263 (315)
T ss_dssp CTTSEEEEEETTEECCTTCSSEEEE-EEE---------------------------------------------------
T ss_pred CCCCeeEEEECCEECCccccccccc-cee---------------------------------------------------
Confidence 9999999999998886542111000 000
Q ss_pred ccccceeccccCCCCCceEEeeCCeEEEeCCCCCCC-CceEEEEEEcCceeEEeecEEEEE
Q psy14896 506 YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED-RGSYHCKASNKFGSIISESVQLAF 565 (813)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d-~G~Y~C~a~n~~g~~~s~~~~l~v 565 (813)
+......+.....+.|.|.++ ..+| +|.|+|.|.|..|.... .+.|.|
T Consensus 264 ----------~~~~~~~~~~~~~~~L~i~~v-~~~d~~G~Y~C~a~N~~G~~~~-~~~l~v 312 (315)
T 1itb_B 264 ----------VENPANKRRSTLITVLNISEI-ESRFYKHPFTCFAKNTHGIDAA-YIQLIY 312 (315)
T ss_dssp ----------ECCSSCGGGEEEEEEEEESSC-CGGGGTSCEEEEEECTTCCEEE-EEEEEC
T ss_pred ----------eeccCCCceeEEEEEEEEeec-CHHHcCCceEEEEecCCCceeE-EEEEEe
Confidence 000111122234458999997 8999 99999999999998743 366655
No 71
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.97 E-value=3e-29 Score=253.51 Aligned_cols=239 Identities=19% Similarity=0.220 Sum_probs=183.3
Q ss_pred ccccCeEEEEEeeccCCC-cEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEe
Q psy14896 480 SILNDITLSCYAGGYPNP-SYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIIS 558 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s 558 (813)
.+|+.+.|.|.+.+.|.+ .+.|+|+|..+.. .+.+|.|.++ ..+|+|.|+|.|.|..+.
T Consensus 14 ~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~----------------~~~~l~i~~~-~~~d~G~Y~C~~~~~~~s--- 73 (262)
T 3rjd_A 14 FQEETVTLHCEVLHLPGSSSTQWFLNGTATQT----------------STPSYRITSA-SVNDSGEYRCQRGLSGRS--- 73 (262)
T ss_dssp ETTCCEEEEEECSSCCCTTCEEEEETTEECSC----------------CSSEEEESSC-CGGGCEEEEEEESSSCCC---
T ss_pred eCCCeEEEEEECCCCCCCceEEEEECCEEeec----------------cCCeEEEecC-CcccCeEEEEEEecCCcc---
Confidence 789999999999999988 9999999965311 2568999997 999999999999987654
Q ss_pred ecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCee
Q psy14896 559 ESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN 638 (813)
Q Consensus 559 ~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 638 (813)
..+.|.|..++. ........+.+|+.++|.|.+..+.|.+.+.|+|++..+. ....++.|.|.+++.+|+|.
T Consensus 74 ~~~~l~v~~~~~-~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~-------~~~~~~~l~i~~~~~~d~G~ 145 (262)
T 3rjd_A 74 DPIQLEIHRGWL-LLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFK-------FFHWNSNLTILKTNISHNGT 145 (262)
T ss_dssp CCEEEEEECSSE-EEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEE-------EEEECCCEEESSCCGGGCEE
T ss_pred ccEEEEEeccce-EecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccc-------ccCCCCeEEEEECChhhCEE
Confidence 346777765543 3344456677899999999987788999999999986521 12236789999999999999
Q ss_pred EEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCC-C----eEEEEeCCccc
Q psy14896 639 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV-P----SYNWTRRGSPL 713 (813)
Q Consensus 639 Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~-p----~i~W~k~g~~l 713 (813)
|+|.|.|..+.. ...+.|.|...+....+..+. ...+.+|+.++|.|.+.|.|. | .+.|+++|..+
T Consensus 146 Y~C~~~n~~~~~---~~~~~l~V~~~~~~p~~~~~~------~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~ 216 (262)
T 3rjd_A 146 YHCSGMGKHRYT---SAGISVTVKELFPAPVLNASV------TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTL 216 (262)
T ss_dssp EEEEEESSSEEE---EECEEEEEECSSCCCEEEESS------CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEE
T ss_pred EEEEEeCCCCcc---ccceEEEeccCCCCCeEeecC------ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEe
Confidence 999999988543 334677777643222222211 256789999999999999986 5 37899999987
Q ss_pred CCCceeeecceEEEECCCCCCCCEEEEEEEEcCCCce---EEEEEEEEE
Q psy14896 714 PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSAL---ESSVTISIQ 759 (813)
Q Consensus 714 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~---~~~~~l~V~ 759 (813)
... .....|+|.+++.+|+|.|+|.|.|..|.. +..+.|.|+
T Consensus 217 ~~~----~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~~~~s~~~~l~V~ 261 (262)
T 3rjd_A 217 RGR----NTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVL 261 (262)
T ss_dssp EEE----ESCCEEEESSCCGGGCEEEEEEEEETTSSCEEECCCEEECEE
T ss_pred ccc----CCCceEEEEEechhhCeEEEEEEEcccCceEEecCCeEEEEe
Confidence 532 335689999999999999999999999975 334555554
No 72
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.96 E-value=6e-29 Score=251.34 Aligned_cols=248 Identities=19% Similarity=0.216 Sum_probs=181.5
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCC-eEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNP-SYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p-~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
+|.|+..|.+..+.+| +++.|.|.+.+.|.+ .|+|+|+|..+.. .+++|.|.+. +.+
T Consensus 1 kP~i~~~p~~~~v~~G-----~~v~l~C~~~~~~~~~~~~W~~~g~~~~~----------------~~~~l~i~~~-~~~ 58 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQE-----ETVTLHCEVLHLPGSSSTQWFLNGTATQT----------------STPSYRITSA-SVN 58 (262)
T ss_dssp CCEEEESSCCSEEETT-----CCEEEEEECSSCCCTTCEEEEETTEECSC----------------CSSEEEESSC-CGG
T ss_pred CCeEecCCCcEEeeCC-----CeEEEEEECCCCCCCceEEEEECCEEeec----------------cCCeEEEecC-Ccc
Confidence 3788999999888777 669999999998888 9999999976521 1557888875 899
Q ss_pred CCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEE
Q psy14896 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFV 347 (813)
Q Consensus 268 d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~ 347 (813)
|+|.|+|.|.|..+ +..+.|.|..++ +.+......+.+|+.+.|.|.+..+.|.+.+.|++++..+.. .
T Consensus 59 d~G~Y~C~~~~~~~---s~~~~l~v~~~~-~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~-------~ 127 (262)
T 3rjd_A 59 DSGEYRCQRGLSGR---SDPIQLEIHRGW-LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF-------F 127 (262)
T ss_dssp GCEEEEEEESSSCC---CCCEEEEEECSS-EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEE-------E
T ss_pred cCeEEEEEEecCCc---cccEEEEEeccc-eEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccc-------c
Confidence 99999999998766 456777776543 334455667889999999999767889999999999987421 2
Q ss_pred ccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeecC
Q psy14896 348 SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYP 427 (813)
Q Consensus 348 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~p 427 (813)
..++.|.|.+++.+|+|.|+|.|.|..+.. +..+.|.|........+... ....+.+|+.+.|.|.+.+.|
T Consensus 128 ~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~---~~~~~l~V~~~~~~p~~~~~------~~~~~~~g~~~~l~C~~~~~p 198 (262)
T 3rjd_A 128 HWNSNLTILKTNISHNGTYHCSGMGKHRYT---SAGISVTVKELFPAPVLNAS------VTSPLLEGNLVTLSCETKLLL 198 (262)
T ss_dssp EECCCEEESSCCGGGCEEEEEEEESSSEEE---EECEEEEEECSSCCCEEEES------SCSSEETTCCEEEEEECCCCC
T ss_pred CCCCeEEEEECChhhCEEEEEEEeCCCCcc---ccceEEEeccCCCCCeEeec------CceeecCCCeEEEEeEcccCC
Confidence 235689999999999999999999987533 33367777653221111111 123577788888888887777
Q ss_pred C-CeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccc
Q psy14896 428 V-PSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 506 (813)
Q Consensus 428 ~-p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~ 506 (813)
. |.+.| .+.|++++.
T Consensus 199 ~~p~~~~----------------------------------------------------------------~~~w~~~~~ 214 (262)
T 3rjd_A 199 QRPGLQL----------------------------------------------------------------YFSFYMGSK 214 (262)
T ss_dssp C-----E----------------------------------------------------------------EEEEEETTE
T ss_pred CCCCccE----------------------------------------------------------------EEEEEeCCc
Confidence 5 55444 245777764
Q ss_pred cccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEE
Q psy14896 507 VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSII 557 (813)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~ 557 (813)
.+.. ....+.|.|.++ ..+|+|.|+|.|.|..|...
T Consensus 215 ~~~~--------------~~~~~~L~i~~v-~~~d~G~Y~C~a~n~~G~~~ 250 (262)
T 3rjd_A 215 TLRG--------------RNTSSEYQILTA-RREDSGLYWCEAATEDGNVL 250 (262)
T ss_dssp EEEE--------------EESCCEEEESSC-CGGGCEEEEEEEEETTSSCE
T ss_pred Eecc--------------cCCCceEEEEEe-chhhCeEEEEEEEcccCceE
Confidence 3211 123457999997 99999999999999999743
No 73
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.96 E-value=9.2e-30 Score=267.43 Aligned_cols=279 Identities=20% Similarity=0.246 Sum_probs=116.1
Q ss_pred CCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEccCccEEEeeeeecCCeeeEEEEeeeccccCCC
Q psy14896 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRN 380 (813)
Q Consensus 301 ~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 380 (813)
.+....+.+|+.++|.|.+..+.|.+.+.|+|+|.++ ....++.+ .++.|.|.+++.+|+|.|+|.|.|. |..
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~--~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~--- 86 (334)
T 1ry7_B 14 QQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGL--VPSERVLV-GPQRLQVLNASHEDSGAYSCRQRLT-QRV--- 86 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeC--CCcccEEe-ccceEEEeecccccCEEEEEEEEeC-CeE---
Confidence 3566778899999999997655578999999999874 33444443 4678999999999999999999998 432
Q ss_pred CCceeeEEccCCccccc--------------ccCCCCCC----CCCcCCCCCCcEEEEEEEeecCCCeeeEeecCCcCCC
Q psy14896 381 GPFFPLKVFPHSNFQQL--------------KFPNNFPK----TFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR 442 (813)
Q Consensus 381 s~~~~l~v~~~~~~~~~--------------~~~~~~~~----~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~~~~l~~ 442 (813)
+..+.|.|...+..... .+|....+ .....+.+|+.+.|.|.+.|.|.|.+.|++++..+..
T Consensus 87 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~ 166 (334)
T 1ry7_B 87 LCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRG 166 (334)
T ss_dssp --------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCT
T ss_pred EEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcc
Confidence 33466777654321100 01111000 0012234455555555554444444455444444322
Q ss_pred CceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCc
Q psy14896 443 NAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 522 (813)
Q Consensus 443 ~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~ 522 (813)
...+ ...
T Consensus 167 ~~~~-------------------------------------------------------------------------~~~ 173 (334)
T 1ry7_B 167 EHRI-------------------------------------------------------------------------GGI 173 (334)
T ss_dssp TSST-------------------------------------------------------------------------TCC
T ss_pred cccc-------------------------------------------------------------------------cce
Confidence 1100 000
Q ss_pred eEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecc----cccc-cCCCceeccCCCceEEeCCCCCCC
Q psy14896 523 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG----EFNL-KRAPEIGNQNWGKAMFCDPPTNYP 597 (813)
Q Consensus 523 ~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p----~~~~-~~~~~~~~~g~~~~l~C~~~~~~p 597 (813)
.......+|.|.++ ..+|+|.|+|.|.|..|.. +..+.|.|...+ .+.. .+....+..|+.++|.|.+ .+.|
T Consensus 174 ~~~~~~~~L~i~~v-~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~-~g~p 250 (334)
T 1ry7_B 174 KLRHQQWSLVMESV-VPSDRGNYTCVVENKFGSI-RQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKV-YSDA 250 (334)
T ss_dssp CCCTTTTEEEECSC-CGGGCCCEEEEEEETTEEE-EEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCC-BCSS
T ss_pred ecccceEEEEECCC-CcccCEEEEEEEEeCCCCE-EEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEE-ecCC
Confidence 11113468999997 9999999999999999886 444677776532 2222 2345567889999999999 7899
Q ss_pred ccEEEEcc----CCCCCcccCCCeEEEeeC----------ccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEcc
Q psy14896 598 GVNYYWAR----DYFPNFVEEDKRVFVSYD----------GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP 663 (813)
Q Consensus 598 ~~~v~W~k----~~~~~~~~~~~~~~~~~~----------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~ 663 (813)
.+.|.|+| +|.++.......+.+..+ ++|.|.+++.+|+|.|+|.|.|..|.... .+.|.|..
T Consensus 251 ~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~---~~~l~V~~ 327 (334)
T 1ry7_B 251 QPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHH---SAWLVVLP 327 (334)
T ss_dssp CEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEE---EEEEEEEC
T ss_pred CCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEE---EEEEEEEE
Confidence 99999999 666533222222222211 26999999999999999999999987544 47788876
Q ss_pred CC
Q psy14896 664 HS 665 (813)
Q Consensus 664 ~p 665 (813)
.|
T Consensus 328 ~~ 329 (334)
T 1ry7_B 328 AE 329 (334)
T ss_dssp SC
T ss_pred CC
Confidence 55
No 74
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.96 E-value=2.7e-29 Score=260.52 Aligned_cols=275 Identities=17% Similarity=0.157 Sum_probs=180.7
Q ss_pred ceeecCCCccccccEEEEeeecc-CCCCeEEEeecccccccccc-------cccccCCCccEEee-----CCeEEEcCCc
Q psy14896 198 DVVFDLSKRSILNDITLSCYAGG-YPNPSYEWFKEDYVQDRLVA-------NLIDPLSDKRFTLS-----GGNLIINDPR 264 (813)
Q Consensus 198 ~~~v~~g~~~~g~~v~l~C~~~g-~P~p~v~W~k~g~~l~~~~~-------~~~~~~~~~~~~~~-----~~~l~i~~~~ 264 (813)
++.+.+| ++++|.|.+.+ .|.+.|+|+|++........ .........+..+. +++|.|.+.
T Consensus 8 ~vtv~~G-----~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v- 81 (308)
T 4fom_A 8 HVTAVWG-----KNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNI- 81 (308)
T ss_dssp SCEEETT-----SCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSC-
T ss_pred EeEEEcC-----CcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccC-
Confidence 4555566 77999999965 45568999998764322110 11122223344432 457888885
Q ss_pred cccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCC--CceeecCCCeEEEecCCCCCCcceEEEeeccccccccCC
Q psy14896 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA--PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEED 342 (813)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~--~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~ 342 (813)
+.+|+|.|+|.|.|..+...+..+.+.+...+.+..... ......++.+.|.|.+..|.|.+.++|+|++.++....
T Consensus 82 ~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~- 160 (308)
T 4fom_A 82 GFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTT- 160 (308)
T ss_dssp CGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEE-
T ss_pred CHHHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCccccccc-
Confidence 899999999999986433336667777766665443333 33344556678999877889999999999998753211
Q ss_pred ccEEEc----cCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEE
Q psy14896 343 KRVFVS----YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVR 418 (813)
Q Consensus 343 ~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~ 418 (813)
..... ..+.|.|..+..+|+|.|+|.|.|..+.... +..+.|.|..+|.+.... .....+.+|+.++
T Consensus 161 -~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~-~~~~~l~V~~~P~~~~~~-------~~~~~~~~g~~v~ 231 (308)
T 4fom_A 161 -TSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDI-RYSFILDIQYAPEVSVTG-------YDGNWFVGRKGVN 231 (308)
T ss_dssp -EECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCE-EEEEECCCCEEEEECCBC-------CCSCEETTCCSCE
T ss_pred -ceeeeecccccccceEEeeeecCCccEEEEEEccCCCCce-EEeEEEEEecCCeeEEcc-------cceeeeeccccEE
Confidence 11111 1236999999999999999999998765332 223555565554322111 1123466778888
Q ss_pred EEEEEeecCCC-eeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCC
Q psy14896 419 LECVAFGYPVP-SYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNP 497 (813)
Q Consensus 419 l~C~~~g~p~p-~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~ 497 (813)
|.|.+.|+|.| .+.|+|++..+....
T Consensus 232 l~C~~~g~P~p~~v~W~k~~~~~~~~~----------------------------------------------------- 258 (308)
T 4fom_A 232 LKCNADANPPPFKSVWSRLDGQWPDGL----------------------------------------------------- 258 (308)
T ss_dssp EECCEEEESCEEEEECCBSSSCCCSSC-----------------------------------------------------
T ss_pred EEEEEecCCCCcEEEEEECCeECCCcE-----------------------------------------------------
Confidence 88888888877 588888776664321
Q ss_pred cEEEeeccccccceeccccCCCCCceEEeeCC-eEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeeccc
Q psy14896 498 SYEWFKEDYVQDRLVANLIDPLSDKRFTLSGG-NLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE 570 (813)
Q Consensus 498 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~ 570 (813)
...++ .|.|.++ ..+|+|.|+|.|.|..|.. +..+.|.|..+|.
T Consensus 259 ---------------------------~~~~~~~l~i~~v-~~~d~G~Y~C~A~N~~G~~-~~~~~l~V~~~P~ 303 (308)
T 4fom_A 259 ---------------------------LASDNTLHFVHPL-TFNYSGVYICKVTNSLGQR-SDQKVIYISDPPH 303 (308)
T ss_dssp ---------------------------BCSTTEEECCSCC-CSCCCSEEEEEEEETTEEE-EEEEECCEECCC-
T ss_pred ---------------------------EEcCCeEEEECCC-ChhhCEEEEEEEEeCCCcE-EEEEEEEEEcCCC
Confidence 01122 3445565 8999999999999999987 4457888877764
No 75
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.96 E-value=4.4e-28 Score=253.50 Aligned_cols=219 Identities=15% Similarity=0.188 Sum_probs=153.8
Q ss_pred CceeecCCCccccccEEEEeeeccC---------CCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 197 TDVVFDLSKRSILNDITLSCYAGGY---------PNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 197 ~~~~v~~g~~~~g~~v~l~C~~~g~---------P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
.++.+.+| +++.|.|.+.+. |.+.|.|||+|..+.. .+.+ ..+++|.|.+. +.+
T Consensus 37 ~~v~v~eG-----~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~---------~~~~--~~~~~L~i~~v-~~~ 99 (329)
T 3oq3_B 37 MNDMAALG-----EPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRP---------LNRR--VKNGDLWIANY-TSN 99 (329)
T ss_dssp EEEEECTT-----SCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEE---------CSTT--EETTEEEESSC-CGG
T ss_pred ceEEEECC-----CeEEEEccCCCCccccccccCCCCeeEEEECCCCccc---------cCce--eecceEEEcCC-ChH
Confidence 55666666 779999999874 6689999999976531 1222 45888999885 899
Q ss_pred CCe-eEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCC-cceEEEeeccccccccCCccE
Q psy14896 268 DRG-SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP-GVNYYWARDYFPNFVEEDKRV 345 (813)
Q Consensus 268 d~G-~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p-~~~v~W~k~~~~~~~~~~~~~ 345 (813)
|+| .|+|.|.|..|......+.+.+..+|.+........+.+|+.+.|.|.+ .|.| .+.++|+|++.++. ....++
T Consensus 100 D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~-~g~p~~~~i~W~k~~~~l~-~~~~~~ 177 (329)
T 3oq3_B 100 DSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGI-LYAKHYNNITWYKNNQELI-IDGTKY 177 (329)
T ss_dssp GGGCCEEEEEECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCC-CSCCCCCEEEEEETTEECC-CSSSSE
T ss_pred hCCCcEEEEEEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEecc-CCCCCCceEEEEECCccCC-CCCceE
Confidence 999 9999999999875443333333333332222223345678899999985 6788 89999999998863 234455
Q ss_pred EEccCccEEEeeeeecCCeeeEEEEeee--ccccCCC-CCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEE
Q psy14896 346 FVSYDGALYFSALEQIDAGNYSCNVQSK--VSDTGRN-GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECV 422 (813)
Q Consensus 346 ~~~~~~~L~i~~v~~~D~G~Y~C~a~n~--~g~~~~~-s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~ 422 (813)
... ++.|.|.+++.+|+|.|+|.|.|. .|..... +..+.|.|..++...... . ......+.+|+.+.|.|.
T Consensus 178 ~~~-~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~---~--~~~~~~v~~G~~~~l~C~ 251 (329)
T 3oq3_B 178 SQS-GQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKL---I--LDPKINVTIGEPANITCT 251 (329)
T ss_dssp EEE-TTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEE---E--CCSEEEECTTSCEEEEEE
T ss_pred ecC-CCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCce---e--cCCeeEEecCCCEEEEEE
Confidence 444 689999999999999999999997 5533221 223667776655321100 0 111256788999999999
Q ss_pred EeecC---CC-eeeEeecCCcC
Q psy14896 423 AFGYP---VP-SYNWTRRGSPL 440 (813)
Q Consensus 423 ~~g~p---~p-~i~W~~~~~~l 440 (813)
+.|.| .| .+.|++++..+
T Consensus 252 ~~g~p~~~~~i~v~W~~~g~~i 273 (329)
T 3oq3_B 252 AVSTSLLVDDVLIDWENPSGWI 273 (329)
T ss_dssp EEETTCCTTCCEEEEECTTSCB
T ss_pred EEECCCCCCCcEEEEEECCeee
Confidence 98887 66 77888888774
No 76
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.96 E-value=8.1e-29 Score=259.16 Aligned_cols=265 Identities=12% Similarity=0.119 Sum_probs=170.5
Q ss_pred ccccCeEEEEEeecc-CCCcEEEeeccccccceeccccCCCCCceEE---------eeCCeEEEeCCCCCCCCceEEEEE
Q psy14896 480 SILNDITLSCYAGGY-PNPSYEWFKEDYVQDRLVANLIDPLSDKRFT---------LSGGNLIINDPRQVEDRGSYHCKA 549 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~-p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~i~~~~~~~d~G~Y~C~a 549 (813)
.+|+.+.|.|.+.+. |.+.|.|+|++.+........ ......++. ....+|.|.++ +.+|+|.|+|.|
T Consensus 16 ~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~-~~~~~~r~~~~~~~~~~~~~~~~L~I~~v-~~~D~G~Y~C~a 93 (327)
T 2wng_A 16 AAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQ-KEGHFPRVTTVSESTKRENMDFSISISNI-TPADAGTYYCVK 93 (327)
T ss_dssp ETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEET-TSSCCTTEEECC---CTTCCBCCEEECSC-CGGGCEEEEEEE
T ss_pred ecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEc-CCCCcceeeeecccccccCceeEEEEccC-ccccCeEEEEEe
Confidence 789999999999997 889999999986532211110 111122333 23457999997 999999999999
Q ss_pred EcCcee----EEeecEEEEEeeccccc-ccCCCceeccCCCceEEeCCCCCCCcc--EEEEccCCCCCcccCCCeEEEe-
Q psy14896 550 SNKFGS----IISESVQLAFGFIGEFN-LKRAPEIGNQNWGKAMFCDPPTNYPGV--NYYWARDYFPNFVEEDKRVFVS- 621 (813)
Q Consensus 550 ~n~~g~----~~s~~~~l~v~~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~p~~--~v~W~k~~~~~~~~~~~~~~~~- 621 (813)
.|..+. ..+..+.|.|..+|... +......+.+|+.++|.|.+ .+.|++ .|+|+|+|.++.... ......
T Consensus 94 ~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~-~g~p~~~~~v~W~k~g~~l~~~~-~~~~~~~ 171 (327)
T 2wng_A 94 FRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCES-HGFSPRDITLKWFKNGNELSDFQ-TNVDPVG 171 (327)
T ss_dssp EESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEE-EEEBSSCCEEEEEETTEECCCEE-EEEECSS
T ss_pred ecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEE-eCccCCCcEEEEEECCEEccccc-ccccccc
Confidence 998653 22345678887665432 22233556789999999999 566654 899999997643221 111111
Q ss_pred eCc------cEEEEeecccCCeeEEEEEEeeecCccccCceee--EEEccCCCccccccCCCCCCCCCcCCCCCCeEEEE
Q psy14896 622 YDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP--LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLE 693 (813)
Q Consensus 622 ~~~------~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~--l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~ 693 (813)
.++ .|.|.....+|+|.|+|.|.|..|.......... +.+..+|.+.... ..+.+|+.++|.
T Consensus 172 ~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~----------~~~~~G~~v~l~ 241 (327)
T 2wng_A 172 ESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQ----------QPVRAENQVNVT 241 (327)
T ss_dssp CCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEE----------ECCSSTTCCEEE
T ss_pred CCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEec----------CCcCCCCcEEEE
Confidence 122 4777777778899999999998875321111122 2334444432210 126799999999
Q ss_pred EEecCCCC-C-eEEEEeCCcccCCCc---eeee-c-----ceEEEECCCCCCCCEEEEEEEEcCCCce-EEEEEEEE
Q psy14896 694 CVAFGYPV-P-SYNWTRRGSPLPRNA---YFEN-F-----NRILTIPNVKVEDQGEYICRASNDRSAL-ESSVTISI 758 (813)
Q Consensus 694 C~~~g~P~-p-~i~W~k~g~~l~~~~---~~~~-~-----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~-~~~~~l~V 758 (813)
|.+.|.|+ + .|+|+|||.++..+. .... . .+.|.|..+..+|+|.|+|.|.|..|.. +.++.+.+
T Consensus 242 C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s~~~~~~~ 318 (327)
T 2wng_A 242 CQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKV 318 (327)
T ss_dssp EEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEEEEEECC-
T ss_pred EEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCchhheEEEe
Confidence 99999654 4 899999999885432 1111 1 2469999999999999999999999864 44444433
No 77
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.96 E-value=7.1e-29 Score=255.25 Aligned_cols=252 Identities=15% Similarity=0.121 Sum_probs=185.2
Q ss_pred ccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEee--CCeEEEeCCCCCCCCceEEEEEEcCceeEE
Q psy14896 480 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIINDPRQVEDRGSYHCKASNKFGSII 557 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~ 557 (813)
.+|+.++|.|.+.+. |.|++++.. ....... .++|.|.++ +.+|+|.|+|.|.|..|..
T Consensus 17 ~~G~~v~L~C~~~~~----v~W~~~~~~-------------~~~~~~~~~~~~L~i~~~-~~~d~G~Y~C~~~n~~~~~- 77 (292)
T 4dkd_C 17 KPGATVTLRCVGNGS----VEWDGPPSP-------------HWTLYSDGSSSILSTNNA-TFQNTGTYRCTEPGDPLGG- 77 (292)
T ss_dssp CTTCCEEEEEECSSC----CCBCCCCCS-------------SCEECCBTTEEEEEESSC-CGGGCSCEEECCCC----C-
T ss_pred cCCCcEEEEEcCCCc----eEEccCCCC-------------ceEEeccCceEEEEEccc-ccccCEEEEEEEccCCCCc-
Confidence 789999999999884 999987632 1111111 248999997 9999999999999987765
Q ss_pred eecEEEEEeecccc-cccCCCceeccCCCceEEeCCCCCCCc--cEEEEccCCCCCcccCCCeEEEeeCccEEEEeeccc
Q psy14896 558 SESVQLAFGFIGEF-NLKRAPEIGNQNWGKAMFCDPPTNYPG--VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQI 634 (813)
Q Consensus 558 s~~~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 634 (813)
+..+.|.|..++.. ........+.+|+.++|.|.+. + |. +.|+|++++.. .+....++....++.|.|.++..+
T Consensus 78 ~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~-~-~~~~~~v~W~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~ 154 (292)
T 4dkd_C 78 SAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLT-D-PVLEAGVSLVRVRGR-PLMRHTNYSFSPWHGFTIHRAKFI 154 (292)
T ss_dssp CEEECCEECCSSCCEEESCSEEEEETTSCEECCEEES-S-GGGGSSEEEEEGGGC-CCCSSCCEECCSSSCCEETTCCGG
T ss_pred ceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCC-C-CCcceeEEEEecCCC-ccccCCcccccCCceEEECCCCHH
Confidence 55577888776653 4445556778999999999994 4 44 78999998432 244556677777788999999999
Q ss_pred CCeeEEEEEEeeecCccccCceeeEEEcc----CCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCC-CeEEEEeC
Q psy14896 635 DAGNYSCNVQSKVSDTGRNGPFFPLKVFP----HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV-PSYNWTRR 709 (813)
Q Consensus 635 d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~----~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~-p~i~W~k~ 709 (813)
|+|.|+|.|.|..|... +..+.|.|.. +|.+.. ......+.+|+.++|.|.+.|.|+ +.+.|+++
T Consensus 155 d~G~Y~C~a~n~~~~~~--s~~~~l~V~~~~~~~p~i~~--------~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~ 224 (292)
T 4dkd_C 155 QSQDYQCSALMGGRKVM--SISIRLKVQKVIPGPPALTL--------VPAELVRIRGEAAQIVCSASSVDVNFDVFLQHN 224 (292)
T ss_dssp GCSEEEEEECSTTSCEE--CCCEEEEEECCCCSSCEEEE--------ESSCBCCCSSSCEEEEEEEEESSSCCEEECCBS
T ss_pred HCeEEEEEEEeCCCcee--EEEEEEEEeCCCCCCCeEEc--------cCCceeEecCCCEEEEEEecCCCCceEEEEeCC
Confidence 99999999998766432 2347788876 443322 112245679999999999998775 57999999
Q ss_pred CcccCCCcee--e----ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCc
Q psy14896 710 GSPLPRNAYF--E----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPN 763 (813)
Q Consensus 710 g~~l~~~~~~--~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~ 763 (813)
+..+...... . ...++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|...+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~ 284 (292)
T 4dkd_C 225 NTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAG 284 (292)
T ss_dssp SCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC-----
T ss_pred CcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCCC
Confidence 9877543321 1 1235899999999999999999999999999999999987654
No 78
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.96 E-value=6.7e-28 Score=247.53 Aligned_cols=276 Identities=17% Similarity=0.150 Sum_probs=188.1
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccC
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 268 (813)
+|.|...+.++.+.+| ++++|.|.+.+ .|.|++++.... .......+++|.|.+. +.+|
T Consensus 4 ~p~i~~~~~~~~v~~G-----~~v~L~C~~~~----~v~W~~~~~~~~-----------~~~~~~~~~~L~i~~~-~~~d 62 (289)
T 3ejj_X 4 APVIEPSGPELVVEPG-----ETVTLRCVSNG----SVEWDGPISPYW-----------TLDPESPGSTLTTRNA-TFKN 62 (289)
T ss_dssp CCEEESCSSEEEECTT-----CCEEEEEECSS----CCEEECSCSSSS-----------EECCCSSCCEEEESSC-CGGG
T ss_pred CcEecCCCceEEECCC-----CCEEEEEEeCC----cEEEccCCCceE-----------EEeccCCccEEEEeee-cccc
Confidence 5777777888888777 67999999988 599999875321 0011112467888875 8999
Q ss_pred CeeEEEEeecCceeeEeeeeEEeeeeecc-cccCCCCceeecCCCeEEEecCCCCCCcc-eEEEee-ccccccccCCccE
Q psy14896 269 RGSYHCKASNKFGSIISESVQLAFGFIGE-FNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWAR-DYFPNFVEEDKRV 345 (813)
Q Consensus 269 ~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~-~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~k-~~~~~~~~~~~~~ 345 (813)
+|.|+|.|.|..|.. +..+.|.|..++. +........+.+|+.+.|.|.+. +.|.+ .+.|++ ++.. +....++
T Consensus 63 ~G~Y~C~~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~-~~~~~~~v~W~~~~~~~--~~~~~~~ 138 (289)
T 3ejj_X 63 TGTYRCTELEDPMAG-STTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLIT-DPALKDSVSLMREGGRQ--VLRKTVY 138 (289)
T ss_dssp CEEEEEECCC------CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEES-CGGGGGSEEEEEGGGEE--CCTTCCE
T ss_pred CEEEEEEEeccCCcc-eeEEEEEEeCCCcceecccceEEEecCCceEeEEEcc-CCCcceEEEEEecCCee--cCCCccE
Confidence 999999999988875 7788888877665 34445667788899999999975 44554 499986 5554 4456677
Q ss_pred EEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEee
Q psy14896 346 FVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425 (813)
Q Consensus 346 ~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g 425 (813)
.+..++.|.|.++..+|+|.|+|.|.|... ...+..+.|.|..... .+|..........+.+|+.+.|.|.+.+
T Consensus 139 ~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~--~~~~~~~~l~V~~~~~----~~p~i~~~~~~~~~~~g~~~~l~C~~~~ 212 (289)
T 3ejj_X 139 FFSPWRGFIIRKAKVLDSNTYVCKTMVNGR--ESTSTGIWLKVNRVHP----EPPQIKLEPSKLVRIRGEAAQIVCSATN 212 (289)
T ss_dssp EEETTTEEEESSCCGGGCEEEEEEEEETTE--EEECCCEEEEEESSCC----CCCEEEEESSSEECCSSSCEEEEEEEEE
T ss_pred EECCCCCEEEeecccccCEEEEEEEEeCCC--ccccccEEEEEEECCC----CCCeEEecCCceEEEeCCcEEEEEEeCC
Confidence 777888999999999999999999995322 2234457888864211 0011111111234578888999998887
Q ss_pred -cCCCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeec
Q psy14896 426 -YPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE 504 (813)
Q Consensus 426 -~p~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~ 504 (813)
.|.+.+.|++++..+....... +
T Consensus 213 ~~p~~~i~W~~~~~~~~~~~~~~------------------------------------------------------~-- 236 (289)
T 3ejj_X 213 AEVGFNVILKRGDTKLEIPLNSD------------------------------------------------------F-- 236 (289)
T ss_dssp SSSCCEEEEEETTEECCCCEEEE------------------------------------------------------E--
T ss_pred CCCceEEEEEECCEEeeccCCcc------------------------------------------------------c--
Confidence 6888888888877664321100 0
Q ss_pred cccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecc
Q psy14896 505 DYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG 569 (813)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p 569 (813)
........++|.|.++ ..+|+|.|+|.|.|..|...+. +.|.+...+
T Consensus 237 ----------------~~~~~~~~~~L~i~~v-~~~d~G~Y~C~a~N~~G~~~~s-~~L~~~~~~ 283 (289)
T 3ejj_X 237 ----------------QDNYYKKVRALSLNAV-DFQDAGIYSCVASNDVGTRTAT-MNFQVVESH 283 (289)
T ss_dssp ----------------CSSSEEEEEEEEESSC-CSSSCEEEEEEEECSSCEEEEE-EEEECC---
T ss_pred ----------------ccceEEeeEEEEEEee-cccCCEEEEEEEEcCCCCcccc-EEEEEEecc
Confidence 0011123468999997 9999999999999999998544 677665443
No 79
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.96 E-value=7.4e-28 Score=247.16 Aligned_cols=218 Identities=15% Similarity=0.204 Sum_probs=143.8
Q ss_pred CeEEEeCCCCCCCCceEEEEEEcCceeEEeec--EEEEEeecccccccCCC----ceeccCCCceEEeCCCCCCCccEEE
Q psy14896 529 GNLIINDPRQVEDRGSYHCKASNKFGSIISES--VQLAFGFIGEFNLKRAP----EIGNQNWGKAMFCDPPTNYPGVNYY 602 (813)
Q Consensus 529 ~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~--~~l~v~~~p~~~~~~~~----~~~~~g~~~~l~C~~~~~~p~~~v~ 602 (813)
++|.|.++ ..+|+|.|+|.|.|..|...... +.|.|..+........+ ..+.+|+.++|.|.+. .|.+.++
T Consensus 51 ~~L~i~~~-~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~--~p~~~v~ 127 (289)
T 3mjg_X 51 SVLTLTNL-TGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT--DPQLVVT 127 (289)
T ss_dssp EEEEECSC-CGGGCEEEEEECCC------CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS--CTTSCEE
T ss_pred EEEEEccC-ChhhCEEEEEEEcccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC--CCCceEE
Confidence 57899997 99999999999999887643333 34444333322222111 4478899999999994 5677788
Q ss_pred EccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEcc--CCCccccccCCCCCCCC
Q psy14896 603 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP--HSNFQQLKFPNNFPKTF 680 (813)
Q Consensus 603 W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~--~p~~~~~~~p~~~~~~~ 680 (813)
|++++....+. ..+ .....+. ...|+|.|+|.|.|..+..... .+.|.|.. +|.+.. ...
T Consensus 128 w~~~~~~~~~~--~~~--~~~~~~~----~~~d~G~Y~C~a~n~~~~~~s~--~~~l~v~~~~~p~i~~--------~~~ 189 (289)
T 3mjg_X 128 LHEKKGDVALP--VPY--DHQRGFS----GIFEDRSYICKTTIGDREVDSD--AYYVYRLQVSSINVSV--------NAV 189 (289)
T ss_dssp EEESSCCSCCC--CCE--ETTTEEE----ECCCSSEEEEEEEETTEEEECC--CEEEEECCCCCCCCEE--------EES
T ss_pred EEeCCCCCccc--eee--cCCcCee----eeccCcEEEEEEEeCCceeeee--eEEEEecCCCCCCcEE--------eCC
Confidence 87764221121 111 1111121 3679999999999876643332 34566665 232211 112
Q ss_pred CcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCc----ee-----eecceEEEECCCCCCCCEEEEEEEEcCCCceE
Q psy14896 681 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA----YF-----ENFNRILTIPNVKVEDQGEYICRASNDRSALE 751 (813)
Q Consensus 681 ~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~----~~-----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 751 (813)
...+.+|++++|.|.+.|.|.|.|+|++++..+.... .. ....++|.|.+++.+|+|.|+|.|.|.+|..+
T Consensus 190 ~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~ 269 (289)
T 3mjg_X 190 QTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQ 269 (289)
T ss_dssp CSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEE
T ss_pred cceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCce
Confidence 2457899999999999999999999998877543321 11 12347899999999999999999999999999
Q ss_pred EEEEEEEEcCCccccc
Q psy14896 752 SSVTISIQAEPNFTIP 767 (813)
Q Consensus 752 ~~~~l~V~~~P~~~~~ 767 (813)
.++.|.|..+|.+...
T Consensus 270 ~~~~l~v~~~~~~~~~ 285 (289)
T 3mjg_X 270 DEKAINITVVESGHHH 285 (289)
T ss_dssp EEEEEEEEEEC-----
T ss_pred eEEEEEEEEEecCccc
Confidence 9999999998876543
No 80
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.96 E-value=2.3e-28 Score=254.24 Aligned_cols=260 Identities=15% Similarity=0.158 Sum_probs=172.6
Q ss_pred ccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCce----e
Q psy14896 480 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFG----S 555 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g----~ 555 (813)
.+|+.++|.|.+.+. .+.+.|+|+|..+.. .......++.|.|.++ +.+|+|.|+|.|.|..+ .
T Consensus 36 ~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~----------~~~~~~~~~~L~I~~v-~~~D~G~Y~C~a~~~~~~~~~~ 103 (316)
T 3vh8_G 36 PRGGHVTLRCHYRHR-FNNFMLYKEDRIHIP----------IFHGRIFQESFNMSPV-TTAHAGNYTCRGSHPHSPTGWS 103 (316)
T ss_dssp ETTSCEEEEEEBTTB-CCSEEEEESSCSSSC----------HHHHCCBSSCEEECSC-CGGGCEEEEEEEBCSSSSSSBC
T ss_pred CCCCCEEEEEEccCC-CceEEEEeCCCccce----------eecCCcceEEEEECCC-CcccCeEEEEEEEcCCCCccee
Confidence 689999999999988 689999999964211 0111224678999997 99999999999986422 2
Q ss_pred EEeecEEEEEeec---ccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEE--eeCccEEEEe
Q psy14896 556 IISESVQLAFGFI---GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFV--SYDGALYFSA 630 (813)
Q Consensus 556 ~~s~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~--~~~~~L~i~~ 630 (813)
..+..+.|.|... |.+...... .+.+|+.++|.|.+ . .+.+.+.|+|++..+.......... ..++.|.|.+
T Consensus 104 ~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~-~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~ 180 (316)
T 3vh8_G 104 APSNPVVIMVTGNHRKPSLLAHPGP-LVKSGERVILQCWS-D-IMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGP 180 (316)
T ss_dssp CCCCCEEEEEECSSCCCEEEEESCS-EEETTCCEEEEEEE-S-SCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECS
T ss_pred cCCCcEEEEEecCCCCCeEEecCCC-ccCCCCeEEEEEcC-C-CCCcEEEEEECCCccccceeeeeecCCCceEEEEECC
Confidence 2345567777543 233333333 37889999999998 3 4567899999997642211111111 1345799999
Q ss_pred ecccCCeeEEEEEEeeecCcc--ccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEe
Q psy14896 631 LEQIDAGNYSCNVQSKVSDTG--RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR 708 (813)
Q Consensus 631 ~~~~d~G~Y~C~a~n~~g~~~--~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k 708 (813)
++.+|+|.|+|.|.|..|... ..+..+.|.|...+....+...+ ...+.+|++++|.|.+.+ |.+.+.|+|
T Consensus 181 v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~------~~~v~~G~~v~L~C~~~~-~~~~~~W~k 253 (316)
T 3vh8_G 181 MMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQP------GPKVQAGESVTLSCSSRS-SYDMYHLSR 253 (316)
T ss_dssp CCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEES------CSCCCTTSCCEEEEEESS-CCSEEEEEE
T ss_pred CChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCC------CCeecCCCcEEEEEECCC-CCcEEEEEE
Confidence 999999999999999987522 12334667776543322222211 135789999999999974 778999999
Q ss_pred CCcccCCCcee-----eecceEEEECCCCCCCCEEEEEEEEcCCC-----ceEEEEEEEEEcCCc
Q psy14896 709 RGSPLPRNAYF-----ENFNRILTIPNVKVEDQGEYICRASNDRS-----ALESSVTISIQAEPN 763 (813)
Q Consensus 709 ~g~~l~~~~~~-----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G-----~~~~~~~l~V~~~P~ 763 (813)
+|..+...... ......|.|.+++ |+|.|+|.|.|..+ ..+..+.|.|.++|.
T Consensus 254 ~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p~ 316 (316)
T 3vh8_G 254 EGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNPS 316 (316)
T ss_dssp TTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC-------
T ss_pred CCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCCC
Confidence 99987643211 1123689999999 99999999999866 356788888888773
No 81
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.96 E-value=5.7e-27 Score=259.69 Aligned_cols=370 Identities=15% Similarity=0.176 Sum_probs=217.3
Q ss_pred CCCceeecCCCeEEEecCCCCCC-c--ceEEEeec--ccccc-c-------------cCCccEEEcc-----CccEEEee
Q psy14896 302 RAPEIGNQNWGKAMFCDPPTNYP-G--VNYYWARD--YFPNF-V-------------EEDKRVFVSY-----DGALYFSA 357 (813)
Q Consensus 302 ~~~~~~~~~~~~~l~C~~~~~~p-~--~~v~W~k~--~~~~~-~-------------~~~~~~~~~~-----~~~L~i~~ 357 (813)
+....+.+|+.++|.|.+....+ . ..+.|+|. |+... + ....|+.+.. +.+|.|.+
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 86 (512)
T 1zvo_C 7 SGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRS 86 (512)
T ss_pred CCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECc
Confidence 34567889999999999743222 2 68999986 33211 0 0134665543 23799999
Q ss_pred eeecCCeeeEEEEeeecc----------ccCCCCCceeeEEccCCcccccccCCCCCCCC-CcCCCCCCcEEEEEEEeec
Q psy14896 358 LEQIDAGNYSCNVQSKVS----------DTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF-PEAPKAGDKVRLECVAFGY 426 (813)
Q Consensus 358 v~~~D~G~Y~C~a~n~~g----------~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~~l~C~~~g~ 426 (813)
++.+|+|.|.|.+.+..+ .....+..+.|.|...+. ..|.+.+... .....+|+.+.|.|.+.|.
T Consensus 87 v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~----~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~ 162 (512)
T 1zvo_C 87 MSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPT----KAPDVFPIISGCRHPKDNSPVVLACLITGY 162 (512)
T ss_pred CCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCC----cCCeEEeccCCcccccCCCeEEEEEEEEee
Confidence 999999999999987642 111123346777764321 1111110000 0102346788899988876
Q ss_pred -CCC-eeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeec
Q psy14896 427 -PVP-SYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE 504 (813)
Q Consensus 427 -p~p-~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~ 504 (813)
|.| .|+|++++....... .+.
T Consensus 163 ~P~p~~v~W~~~~~~~~~~~-------------------------------------------------~~~-------- 185 (512)
T 1zvo_C 163 HPTSVTVTWYMGTQSQPQRT-------------------------------------------------FPE-------- 185 (512)
T ss_pred ecCceEEEEEcCcccCceEe-------------------------------------------------cCc--------
Confidence 665 788887543210000 000
Q ss_pred cccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeec----------EEEEEeecc-----
Q psy14896 505 DYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISES----------VQLAFGFIG----- 569 (813)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~----------~~l~v~~~p----- 569 (813)
.......+. ..+.|.|... ..+ .|.|+|.|.|..+...... ..+.+..+|
T Consensus 186 ------------~~~~~g~~~-~~s~L~i~~~-~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~pp~~~~~ 250 (512)
T 1zvo_C 186 ------------IQRRDSYYM-TSSQLSTPLQ-QWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQPQAEGS 250 (512)
T ss_pred ------------eecCCCCEE-EEEEEEEcHH-HcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeCCCchhcc
Confidence 000011111 1245778764 556 8999999999887643221 122232222
Q ss_pred -----------------------------------------------cccc-cCCCceeccCCCceEEeCCCCCCCc-cE
Q psy14896 570 -----------------------------------------------EFNL-KRAPEIGNQNWGKAMFCDPPTNYPG-VN 600 (813)
Q Consensus 570 -----------------------------------------------~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~-~~ 600 (813)
.+.+ .+....+..|+.++|.|.+...+|+ ..
T Consensus 251 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~P~~~~ 330 (512)
T 1zvo_C 251 LAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAH 330 (512)
T ss_pred ccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEEeceECCCeE
Confidence 1111 1122334579999999999433453 58
Q ss_pred EEEccCCCCCccc-CCCeEEEeeCc------cEEEEeecccCCeeEEEEEEeeecCccccCceeeEEE----ccCCCccc
Q psy14896 601 YYWARDYFPNFVE-EDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV----FPHSNFQQ 669 (813)
Q Consensus 601 v~W~k~~~~~~~~-~~~~~~~~~~~------~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v----~~~p~~~~ 669 (813)
|+|+|+|.++... .........+| +|.|..+..+|.|.|+|.|.|..+... . ..+.... ..+|.+..
T Consensus 331 i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~-~~~~~~~~~~~~~~p~v~~ 408 (512)
T 1zvo_C 331 LTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-R-LMALREPAAQAPVKLSLNL 408 (512)
T ss_pred EEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-c-eeEEeecCCCCCCCCEEEE
Confidence 9999999763211 11112222344 489999999999999999999987543 1 1121111 12333221
Q ss_pred cccCCCCCCCCCcCCCCCCeEE-EEEEecCCCCC--eEEEEeCCcccCCCcee------eec------ceEEEECCCCCC
Q psy14896 670 LKFPNNFPKTFPEAPKAGDKVR-LECVAFGYPVP--SYNWTRRGSPLPRNAYF------ENF------NRILTIPNVKVE 734 (813)
Q Consensus 670 ~~~p~~~~~~~~~~~~~G~~v~-l~C~~~g~P~p--~i~W~k~g~~l~~~~~~------~~~------~~~L~i~~v~~~ 734 (813)
. +. .. .|+.+. |.|.+.|++++ .|+|+|||.++..+... ..+ .+.|.|.....+
T Consensus 409 ~--~~-------~~--~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~ 477 (512)
T 1zvo_C 409 L--AS-------SD--PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSP 477 (512)
T ss_pred E--cc-------Cc--CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcC
Confidence 1 11 11 799999 99999996544 68999999998654311 111 135888888888
Q ss_pred CCEEEEEEEEcCCCc--eEEEEEEEEEc
Q psy14896 735 DQGEYICRASNDRSA--LESSVTISIQA 760 (813)
Q Consensus 735 d~G~Y~C~a~N~~G~--~~~~~~l~V~~ 760 (813)
|.|.|+|+|.|.... ......|.|..
T Consensus 478 ~~g~YtC~v~h~~l~~~~~~~~~~~v~~ 505 (512)
T 1zvo_C 478 QPATYTCVVSHEDSRTLLNASRSLEVSY 505 (512)
T ss_pred CCCeEEEEEEecCCCCceEEEEEEEecc
Confidence 899999999998654 34455555544
No 82
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.95 E-value=1.8e-27 Score=249.60 Aligned_cols=279 Identities=16% Similarity=0.188 Sum_probs=185.2
Q ss_pred CceeeCCCceeecCCCccccccEEEEeeeccC----CCCeEEEeeccccccccc-------ccccccCCCccEEee----
Q psy14896 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGY----PNPSYEWFKEDYVQDRLV-------ANLIDPLSDKRFTLS---- 254 (813)
Q Consensus 190 P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~----P~p~v~W~k~g~~l~~~~-------~~~~~~~~~~~~~~~---- 254 (813)
+.+...|.++.+.+| ++++|.|.+.+. |.+.|.|+|++....... ...+......++.+.
T Consensus 15 ~~~~~~~~~~~v~~G-----~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~ 89 (331)
T 3u83_A 15 SQVVQVNDSMYGFIG-----TDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSF 89 (331)
T ss_dssp ------CEEEEEETT-----CCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSS
T ss_pred cceEEcCCcEEEEec-----CCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCC
Confidence 445566777888777 779999999886 455899999763211000 001112333455542
Q ss_pred -CCeEEEcCCccccCCeeEEEE-eecCceeeEeeeeEEeeeeecccccC--CCCceeecC---CCeEEEecCCCCCCcce
Q psy14896 255 -GGNLIINDPRQVEDRGSYHCK-ASNKFGSIISESVQLAFGFIGEFNLK--RAPEIGNQN---WGKAMFCDPPTNYPGVN 327 (813)
Q Consensus 255 -~~~l~i~~~~~~~d~G~Y~C~-a~n~~g~~~s~~~~l~v~~~~~~~~~--~~~~~~~~~---~~~~l~C~~~~~~p~~~ 327 (813)
+++|.|.+. +.+|+|.|+|. +.|..|.. +..+.|.|..+|.+.+. .....+.+| +.++|.|.+..+.|.+.
T Consensus 90 ~~~~L~I~~v-~~~D~G~Y~C~~~~~~~~~~-~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~ 167 (331)
T 3u83_A 90 TDGTIRLSRL-ELEDEGVYICEFATFPTGNR-ESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSV 167 (331)
T ss_dssp SBCCEEECSC-CGGGCEEEEEEEEEETTEEE-EEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCE
T ss_pred CCceEEEccc-CcccCcEEEEEEEecCCCcc-EEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCce
Confidence 567888885 89999999998 55666655 77788988887776443 334445555 45899998668889999
Q ss_pred EEEeeccccccccCCccEEEccCc------cEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCC
Q psy14896 328 YYWARDYFPNFVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN 401 (813)
Q Consensus 328 v~W~k~~~~~~~~~~~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~ 401 (813)
++|+|++..... .......++ .|.|.++..+|+|.|+|.|.|..|... ..+.|.|..+|.+... .+
T Consensus 168 i~W~~~~~~~~~---~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~---~~~~l~V~~~P~~~~~-~~- 239 (331)
T 3u83_A 168 VSWETRLKGEAE---YQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFK---ESLTLNVQYEPEVTIE-GF- 239 (331)
T ss_dssp EEEEESSCCEEE---EEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEE---EEEECCEEEEEEEEEE-CC-
T ss_pred EEEEcCCCCccc---cceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcce---eeEEEEEecCCeEEEe-cC-
Confidence 999996443211 111122233 477777799999999999999876533 3477777666543211 11
Q ss_pred CCCCCCCcCCCCCCcEEEEEEEeecCCCe-eeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccc
Q psy14896 402 NFPKTFPEAPKAGDKVRLECVAFGYPVPS-YNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRS 480 (813)
Q Consensus 402 ~~~~~~~~~v~~g~~~~l~C~~~g~p~p~-i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~ 480 (813)
....+.+|+.+.|.|.+.|+|.|. +.|++++..+...
T Consensus 240 -----~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~------------------------------------- 277 (331)
T 3u83_A 240 -----DGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKG------------------------------------- 277 (331)
T ss_dssp -----CSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTT-------------------------------------
T ss_pred -----CCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCccccc-------------------------------------
Confidence 123577888888888888888876 8887777665321
Q ss_pred cccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEe-CCCCCCCCceEEEEEEcCceeEEee
Q psy14896 481 ILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN-DPRQVEDRGSYHCKASNKFGSIISE 559 (813)
Q Consensus 481 ~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~~d~G~Y~C~a~n~~g~~~s~ 559 (813)
....+++|.|. ++ ..+|+|.|+|.|.|..|.. +.
T Consensus 278 -------------------------------------------~~~~~~~L~i~~~v-~~~d~G~Y~C~a~N~~G~~-~~ 312 (331)
T 3u83_A 278 -------------------------------------------VEAQNRTLFFKGPI-NYSLAGTYICEATNPIGTR-SG 312 (331)
T ss_dssp -------------------------------------------EEEETTEEEECSCC-CGGGCEEEEEEEEETTEEE-EE
T ss_pred -------------------------------------------ceecCcEEEEeCCC-ccccCeEEEEEEEeccccc-eE
Confidence 22355689998 76 8999999999999999987 55
Q ss_pred cEEEEEeeccc
Q psy14896 560 SVQLAFGFIGE 570 (813)
Q Consensus 560 ~~~l~v~~~p~ 570 (813)
.+.|.|...+.
T Consensus 313 ~~~l~V~~~~~ 323 (331)
T 3u83_A 313 QVEVNITEAAA 323 (331)
T ss_dssp EEEECCBC---
T ss_pred EEEEEEeccch
Confidence 57887765543
No 83
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.95 E-value=1.2e-26 Score=256.97 Aligned_cols=399 Identities=14% Similarity=0.122 Sum_probs=212.0
Q ss_pred CCCceeecCCCccccccEEEEeeeccCCC----CeEEEeec--ccccccccc------cccccCCCccEEee------CC
Q psy14896 195 QPTDVVFDLSKRSILNDITLSCYAGGYPN----PSYEWFKE--DYVQDRLVA------NLIDPLSDKRFTLS------GG 256 (813)
Q Consensus 195 ~p~~~~v~~g~~~~g~~v~l~C~~~g~P~----p~v~W~k~--g~~l~~~~~------~~~~~~~~~~~~~~------~~ 256 (813)
+|..+.+.+| ++++|.|.+.+.+. +.|.|||+ |..+..... .........|+.+. +.
T Consensus 6 qp~~v~v~~G-----~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 80 (512)
T 1zvo_C 6 ESGPGLVKPS-----ETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQF 80 (512)
T ss_pred CCCCEEEcCC-----CCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEE
Confidence 3556666666 77999999987543 68999997 332211000 00111123455543 24
Q ss_pred eEEEcCCccccCCeeEEEEeecCce----------e--eEeeeeEEeeeee----cccccC-CCCceeecCCCeEEEecC
Q psy14896 257 NLIINDPRQVEDRGSYHCKASNKFG----------S--IISESVQLAFGFI----GEFNLK-RAPEIGNQNWGKAMFCDP 319 (813)
Q Consensus 257 ~l~i~~~~~~~d~G~Y~C~a~n~~g----------~--~~s~~~~l~v~~~----~~~~~~-~~~~~~~~~~~~~l~C~~ 319 (813)
+|.|.+. +.+|+|.|.|.+.+..+ . .....+.|.|... |.+... ........++.++|.|.+
T Consensus 81 sL~I~~v-~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~ 159 (512)
T 1zvo_C 81 SLNLRSM-SAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLI 159 (512)
T ss_pred EEEECcC-CHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEE
Confidence 6888885 89999999999998642 1 1134456776532 222211 111102235788999998
Q ss_pred CCCCCcc-eEEEeeccccccccCCccEEEccCc------cEEEeeeeecCCeeeEEEEeeeccccCCCC--------Cce
Q psy14896 320 PTNYPGV-NYYWARDYFPNFVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNG--------PFF 384 (813)
Q Consensus 320 ~~~~p~~-~v~W~k~~~~~~~~~~~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s--------~~~ 384 (813)
....|.+ +|+|++++........... ...++ .|.|.....+ .|.|+|.|.|..+...... ...
T Consensus 160 ~g~~P~p~~v~W~~~~~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~ 237 (512)
T 1zvo_C 160 TGYHPTSVTVTWYMGTQSQPQRTFPEI-QRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQA 237 (512)
T ss_pred EeeecCceEEEEEcCcccCceEecCce-ecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCC
Confidence 6666775 9999997654211111111 12223 4788877777 9999999999887533221 011
Q ss_pred eeEEccCCcccccccCCCCCCCCCcCCCCCCc-------------------EEEEEEEeecCCCeeeEeecC-CcCCCCc
Q psy14896 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDK-------------------VRLECVAFGYPVPSYNWTRRG-SPLPRNA 444 (813)
Q Consensus 385 ~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~-------------------~~l~C~~~g~p~p~i~W~~~~-~~l~~~~ 444 (813)
.+.+..+|........ . .. .+.....|.- ..-.|... .-.|.+.-+... ..+
T Consensus 238 ~v~l~~pp~~~~~~~~-~-~~-~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~-~~~p~v~~~~p~~~~~---- 309 (512)
T 1zvo_C 238 SSVPTAQPQAEGSLAK-A-TT-APATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSH-TQPLGVYLLTPAVQDL---- 309 (512)
T ss_pred EEEEeCCCchhccccc-c-cc-CchhhccCcccccceeccCCcccccccCcccccCCCC-CCCCEEEEECCChHHh----
Confidence 2333323220000000 0 00 0000000000 00012000 012233222211 111
Q ss_pred eeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCC--CcEEEeeccccccce-eccccCCCCC
Q psy14896 445 YFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPN--PSYEWFKEDYVQDRL-VANLIDPLSD 521 (813)
Q Consensus 445 ~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~--~~v~W~k~~~~~~~~-~~~~~~~~~~ 521 (813)
.+|+.++|.|.+.|+++ ..|+|+|+|..+... .........+
T Consensus 310 -----------------------------------~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~ 354 (512)
T 1zvo_C 310 -----------------------------------WLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSN 354 (512)
T ss_pred -----------------------------------ccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCC
Confidence 45778888888877533 378888888654310 0000111111
Q ss_pred ceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEE----eecccccccCCCceeccCCCce-EEeCCCCCC
Q psy14896 522 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAF----GFIGEFNLKRAPEIGNQNWGKA-MFCDPPTNY 596 (813)
Q Consensus 522 ~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v----~~~p~~~~~~~~~~~~~g~~~~-l~C~~~~~~ 596 (813)
..+. ..+.|.|... ..+|.|.|+|.|.|..+......+.... ..+|.+....... .|+.++ |.|.+...+
T Consensus 355 gt~~-~~s~L~i~~~-~~~d~g~y~C~a~n~~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~ 429 (512)
T 1zvo_C 355 GSQS-QHSRLTLPRS-LWNAGTSVTCTLNHPSLPPQRLMALREPAAQAPVKLSLNLLASSD---PPEAASWLLCEVSGFS 429 (512)
T ss_pred CeEE-EEEEEEEchH-HhcCCCeEEEEEEeCCCCCCceeEEeecCCCCCCCCEEEEEccCc---CCCCceEEEEEEeeeC
Confidence 2221 2346888875 8889999999999987654211122111 2334433332222 688899 999994335
Q ss_pred Cc-cEEEEccCCCCCcccCC--CeEEEeeCcc-------EEEEeecccCCeeEEEEEEeeecC
Q psy14896 597 PG-VNYYWARDYFPNFVEED--KRVFVSYDGA-------LYFSALEQIDAGNYSCNVQSKVSD 649 (813)
Q Consensus 597 p~-~~v~W~k~~~~~~~~~~--~~~~~~~~~~-------L~i~~~~~~d~G~Y~C~a~n~~g~ 649 (813)
|+ ..|+|+|||.++..... .......+|+ |.|.....+|.|.|+|.|.|....
T Consensus 430 P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~ 492 (512)
T 1zvo_C 430 PPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSR 492 (512)
T ss_pred CCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCCC
Confidence 54 47999999986432211 1222344553 555555666799999999998754
No 84
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.95 E-value=3.3e-28 Score=254.49 Aligned_cols=270 Identities=15% Similarity=0.180 Sum_probs=175.2
Q ss_pred CCCceeecCCCeEEEecCCCCCCcceEEEeeccccccc---c----CCccEEE--------ccCccEEEeeeeecCCeee
Q psy14896 302 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV---E----EDKRVFV--------SYDGALYFSALEQIDAGNY 366 (813)
Q Consensus 302 ~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~---~----~~~~~~~--------~~~~~L~i~~v~~~D~G~Y 366 (813)
+....+.+|+.++|.|.+....|.+.|+|+|++.+... . ...|+.. ..+++|.|.+++.+|+|.|
T Consensus 10 p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 89 (327)
T 2wng_A 10 DKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTY 89 (327)
T ss_dssp CSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEE
T ss_pred CCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEE
Confidence 45567889999999999754448899999999875311 0 1224443 2345799999999999999
Q ss_pred EEEEeeeccccC--CCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeecCCC--eeeEeecCCcCCC
Q psy14896 367 SCNVQSKVSDTG--RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP--SYNWTRRGSPLPR 442 (813)
Q Consensus 367 ~C~a~n~~g~~~--~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p--~i~W~~~~~~l~~ 442 (813)
+|.|.|..+... ..+..+.|.|...+....+..| ...+.+|+.+.|.|.+.|.|+| .+.|++++.++..
T Consensus 90 ~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~-------~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~ 162 (327)
T 2wng_A 90 YCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGP-------AARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSD 162 (327)
T ss_dssp EEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECC-------SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCC
T ss_pred EEEeecCCCcceeEeecCcEEEEEEecCCCceeecc-------ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccc
Confidence 999999765311 1234478888776554333322 2468899999999999988776 8999999887754
Q ss_pred CceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCc
Q psy14896 443 NAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 522 (813)
Q Consensus 443 ~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~ 522 (813)
..... .......
T Consensus 163 ~~~~~--------------------------------------------------------------------~~~~~~~ 174 (327)
T 2wng_A 163 FQTNV--------------------------------------------------------------------DPVGESV 174 (327)
T ss_dssp EEEEE--------------------------------------------------------------------ECSSCCS
T ss_pred ccccc--------------------------------------------------------------------ccccCCC
Confidence 31100 0000111
Q ss_pred eEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeE--EeecEEE--EEeecccccccCCCceeccCCCceEEeCCCCC-CC
Q psy14896 523 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSI--ISESVQL--AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTN-YP 597 (813)
Q Consensus 523 ~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~--~s~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~p 597 (813)
.+. ..+.|.|... ..+|.|.|+|.|.|..+.. ....+.+ .+..+|.+.....+ +.+|+.++|.|.+ .| .|
T Consensus 175 ~~~-~~s~L~i~~~-~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~--~~~G~~v~l~C~~-~g~~p 249 (327)
T 2wng_A 175 SYS-IHSTAKVVLT-REDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP--VRAENQVNVTCQV-RKFYP 249 (327)
T ss_dssp CEE-EEEEEEEECC-TTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC--CSSTTCCEEEEEE-EEEBS
T ss_pred ceE-EEEEEEEech-hcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC--cCCCCcEEEEEEE-ccccC
Confidence 111 2235777664 6677899999999987652 1222233 34556655544333 6789999999999 56 44
Q ss_pred cc-EEEEccCCCCCcccCCCeEEEeeCcc------EEEEeecccCCeeEEEEEEeeecCcc
Q psy14896 598 GV-NYYWARDYFPNFVEEDKRVFVSYDGA------LYFSALEQIDAGNYSCNVQSKVSDTG 651 (813)
Q Consensus 598 ~~-~v~W~k~~~~~~~~~~~~~~~~~~~~------L~i~~~~~~d~G~Y~C~a~n~~g~~~ 651 (813)
++ .|+|+|||.++......+.....+|+ |.|.++..+|+|.|+|.|.|.+|...
T Consensus 250 ~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~ 310 (327)
T 2wng_A 250 QRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAV 310 (327)
T ss_dssp SCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCE
T ss_pred CCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCc
Confidence 44 89999999864333223344444553 78888899999999999999998643
No 85
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.95 E-value=1.2e-27 Score=241.95 Aligned_cols=199 Identities=15% Similarity=0.173 Sum_probs=141.7
Q ss_pred cccEEEEeeecc-CCCC--eEEEeecccccccccccccccCCCccEEeeCCeEEEcCC--ccccCCee--EEEEeecCce
Q psy14896 209 LNDITLSCYAGG-YPNP--SYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDP--RQVEDRGS--YHCKASNKFG 281 (813)
Q Consensus 209 g~~v~l~C~~~g-~P~p--~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~--~~~~d~G~--Y~C~a~n~~g 281 (813)
|++++|.|.+.| .|.| .|.|||+|..+.. .....++.+.+... ++.+|+|. |+|.|.|..|
T Consensus 18 G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~------------~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~ 85 (265)
T 2oz4_A 18 DTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP------------TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQ 85 (265)
T ss_dssp TEEEEEEEEEESCSCGGGCEEEEEETTEECCC------------EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTE
T ss_pred CCCEEEEEEccCCCCCcceEEEEEeCCEECCc------------eEeeCCCeEEEEeecccccccCCcceEEEEEecCCC
Confidence 477999999998 8877 9999999986521 33344555555432 25688885 9999999998
Q ss_pred eeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEccCccEEEeeeeec
Q psy14896 282 SIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQI 361 (813)
Q Consensus 282 ~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 361 (813)
.. +..+.|.|...|++.+......+.+|+.++|.|.+. |.+.++| +|.++... ...+.|.|..+..+
T Consensus 86 ~~-~~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~---p~~~i~W--~g~~~~~~-------~~~~~l~i~~~~~~ 152 (265)
T 2oz4_A 86 SQ-ETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH---PRAKVTL--NGVPAQPL-------GPRAQLLLKATPED 152 (265)
T ss_dssp EE-EEEEEEEEECCCCCEEEESCSEEETTCEEEEEEECC---TTSEEEE--SSCSSSCC-------SSEECCEEECCGGG
T ss_pred Cc-EEEEEEEEeCCCCceeecCCceecCCCcEEEEEEcc---CCCEEEE--CCEEccCC-------CCcEEEEEcccccc
Confidence 86 677888887665555556677788899999999964 8999999 88765211 12357899999999
Q ss_pred CCeeeEEEEeeec-cccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeecCCCeeeEeecCC
Q psy14896 362 DAGNYSCNVQSKV-SDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGS 438 (813)
Q Consensus 362 D~G~Y~C~a~n~~-g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~~~ 438 (813)
|+|.|+|.|.|.. |.....+..+.|.|..+|.+.....|. ...+.+|+.+.|.|.+.|+|.|.+.|++++.
T Consensus 153 ~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~------~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~ 224 (265)
T 2oz4_A 153 NGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPG------NWTWPENSQQTPMCQAWGNPLPELKCLKDGT 224 (265)
T ss_dssp TTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCS------EEEEETTCEECCCCCCEEESCCEEEEEETTT
T ss_pred CCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCC------ccEEcCCCeEEEEeECccCCCCeEEEEECCc
Confidence 9999999998655 544333345778887766543222111 2346677777777777777777777766654
No 86
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.95 E-value=1e-27 Score=253.50 Aligned_cols=220 Identities=13% Similarity=0.178 Sum_probs=156.9
Q ss_pred CCceeccCCCceEEeCCCCCCCc-----------cEEEEccCCCCCc----cc---CCCeEEEeeCccEEEEeecccCCe
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYPG-----------VNYYWARDYFPNF----VE---EDKRVFVSYDGALYFSALEQIDAG 637 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p~-----------~~v~W~k~~~~~~----~~---~~~~~~~~~~~~L~i~~~~~~d~G 637 (813)
....+.+|+.++|.|.+ .+.|. +.|+|+|++.... +. ...++ ...+++|.|.+++.+|+|
T Consensus 15 ~~v~v~~G~~v~L~C~~-~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~D~G 92 (349)
T 4dep_C 15 RQIQVFEDEPARIKCPL-FEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRI-SKEKDVLWFRPTLLNDTG 92 (349)
T ss_dssp CCCEEETTSCEEEECTC-CCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCE-EEETTEEEESSCCGGGCE
T ss_pred eeEEEecCCeEEEEccc-cccccccccccccCCCceEEEEECCCCCcccccccccccCceE-eecCCEEEEccCChhhCE
Confidence 44567899999999999 56554 9999999984211 11 12222 345678999999999999
Q ss_pred eEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEe-----cCCCCCeEEEEeCCcc
Q psy14896 638 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-----FGYPVPSYNWTRRGSP 712 (813)
Q Consensus 638 ~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~-----~g~P~p~i~W~k~g~~ 712 (813)
.|+|.|.|..|... ..+.|.|..++..... ....+....+.+|+.+.|.|.+ .|.|.|.|+|+|+|.+
T Consensus 93 ~Y~C~a~n~~~~~~---~~~~l~V~~~~~~~~~----~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~ 165 (349)
T 4dep_C 93 NYTCMLRNTTYCSK---VAFPLEVVQKDSCFNS----PMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYK 165 (349)
T ss_dssp EEEEEEECSSCEEE---EEEEEEEECCCTTSCC----SCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEE
T ss_pred EEEEEEecCCceEE---EEEEEEEecCCcccCc----ccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEE
Confidence 99999999876543 3467888776643221 1111223467899999999985 7889999999999999
Q ss_pred cCCCceeeecceEEEECCCCCCCCEEEEEEEEcCC-Cce---EEEEEEEEEc------CCcccccCCce--eecCCCeEE
Q psy14896 713 LPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR-SAL---ESSVTISIQA------EPNFTIPLTDK--HMDNQADLT 780 (813)
Q Consensus 713 l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~-G~~---~~~~~l~V~~------~P~~~~~~~~~--~~~~g~~~~ 780 (813)
|....++......|.|.+++.+|+|.|+|.|.|.. |.. +..+.|.|.. +|.+..++... .+.+|++++
T Consensus 166 l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~ 245 (349)
T 4dep_C 166 IQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELL 245 (349)
T ss_dssp CCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------C
T ss_pred CCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEE
Confidence 97655555566789999999999999999999997 554 6788888877 57776555443 788999999
Q ss_pred EEEEEc----ccCCceEEEEECCEeccc
Q psy14896 781 WTCEAF----GVPDVTYSWFRNGELGHQ 804 (813)
Q Consensus 781 l~C~~~----g~p~~~v~W~k~g~~l~~ 804 (813)
|.|.+. |.|.|.|.|+|||++|..
T Consensus 246 l~C~~~~~~~g~p~p~v~W~~~g~~l~~ 273 (349)
T 4dep_C 246 IPCTVYFSFLMDSRNEVWWTIDGKKPDD 273 (349)
T ss_dssp CCEEEEECCCTTCCCEEEEESSCC----
T ss_pred EEEEEEEccCCCCCCEEEEEECCEEccc
Confidence 999999 679999999999999987
No 87
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.95 E-value=2.4e-27 Score=246.55 Aligned_cols=226 Identities=14% Similarity=0.153 Sum_probs=151.5
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
.+|.|...|. ..+.+| ++++|.|.+.+. .+.+.|||+|..+... ......+++|.|.+. +.+
T Consensus 23 ~~P~i~~~p~-~~v~~G-----~~v~L~C~~~~~-~~~~~W~k~g~~~~~~----------~~~~~~~~~L~I~~v-~~~ 84 (316)
T 3vh8_G 23 DKPFLSAWPS-AVVPRG-----GHVTLRCHYRHR-FNNFMLYKEDRIHIPI----------FHGRIFQESFNMSPV-TTA 84 (316)
T ss_dssp -CCEEEEESC-SEEETT-----SCEEEEEEBTTB-CCSEEEEESSCSSSCH----------HHHCCBSSCEEECSC-CGG
T ss_pred CCCEeeccCC-CccCCC-----CCEEEEEEccCC-CceEEEEeCCCcccee----------ecCCcceEEEEECCC-Ccc
Confidence 4689999988 456666 779999999986 6899999999764211 111223667888885 899
Q ss_pred CCeeEEEEeecCce----eeEeeeeEEeeeeec---ccccCCCCceeecCCCeEEEecCCCCCCcceEEEeecccccccc
Q psy14896 268 DRGSYHCKASNKFG----SIISESVQLAFGFIG---EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE 340 (813)
Q Consensus 268 d~G~Y~C~a~n~~g----~~~s~~~~l~v~~~~---~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~ 340 (813)
|+|.|+|.|.|..+ ...+..+.|.|...+ .+...+. ..+.+|+.++|.|.+ ..|.+.+.|+|++..+...
T Consensus 85 D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~-~~v~~G~~v~L~C~~--~~~~~~~~w~k~g~~~~~~ 161 (316)
T 3vh8_G 85 HAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPG-PLVKSGERVILQCWS--DIMFEHFFLHKEGISKDPS 161 (316)
T ss_dssp GCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESC-SEEETTCCEEEEEEE--SSCCSEEEEEETTCCSCCE
T ss_pred cCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCC-CccCCCCeEEEEEcC--CCCCcEEEEEECCCccccc
Confidence 99999999986422 223566777775532 2322233 347889999999996 3466799999999875322
Q ss_pred CCccEEE--ccCccEEEeeeeecCCeeeEEEEeeecccc--CCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCc
Q psy14896 341 EDKRVFV--SYDGALYFSALEQIDAGNYSCNVQSKVSDT--GRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDK 416 (813)
Q Consensus 341 ~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~--~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~ 416 (813)
....... ...+.|.|.+++.+|+|.|+|.|.|..|.. ...+..+.|.|...+....+.... ...+.+|+.
T Consensus 162 ~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~------~~~v~~G~~ 235 (316)
T 3vh8_G 162 RLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQP------GPKVQAGES 235 (316)
T ss_dssp EEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEES------CSCCCTTSC
T ss_pred eeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCC------CCeecCCCc
Confidence 1111111 124579999999999999999999987742 223455677776432211111111 125678888
Q ss_pred EEEEEEEeecCCCeeeEeecCCcCC
Q psy14896 417 VRLECVAFGYPVPSYNWTRRGSPLP 441 (813)
Q Consensus 417 ~~l~C~~~g~p~p~i~W~~~~~~l~ 441 (813)
++|.|.+. .|.+.+.|+|+|..+.
T Consensus 236 v~L~C~~~-~~~~~~~W~k~g~~~~ 259 (316)
T 3vh8_G 236 VTLSCSSR-SSYDMYHLSREGGAHE 259 (316)
T ss_dssp CEEEEEES-SCCSEEEEEETTSSCC
T ss_pred EEEEEECC-CCCcEEEEEECCCcCC
Confidence 88888886 3667788888776653
No 88
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.95 E-value=9.1e-27 Score=239.44 Aligned_cols=272 Identities=16% Similarity=0.122 Sum_probs=188.4
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEee--CCeEEEcCCcc
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIINDPRQ 265 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~ 265 (813)
.+|.|...+.+..+.+| ++++|.|.+.|. |.|++++... ...... .++|.|.+. +
T Consensus 3 ~~P~i~~~~~~~~v~~G-----~~v~L~C~~~~~----v~W~~~~~~~-------------~~~~~~~~~~~L~i~~~-~ 59 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPG-----ATVTLRCVGNGS----VEWDGPPSPH-------------WTLYSDGSSSILSTNNA-T 59 (292)
T ss_dssp -CCEEESCCSSCEECTT-----CCEEEEEECSSC----CCBCCCCCSS-------------CEECCBTTEEEEEESSC-C
T ss_pred CCceecCCCCeEEEcCC-----CcEEEEEcCCCc----eEEccCCCCc-------------eEEeccCceEEEEEccc-c
Confidence 46889999988888887 679999999883 9999876421 111111 246777775 8
Q ss_pred ccCCeeEEEEeecCceeeEeeeeEEeeeeeccc-ccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCcc
Q psy14896 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEF-NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKR 344 (813)
Q Consensus 266 ~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~-~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~ 344 (813)
.+|+|.|+|.|.|..|.. +..+.|.|..++.+ ........+.+|+.++|.|.+....+.+.++|++++... +....+
T Consensus 60 ~~d~G~Y~C~~~n~~~~~-~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~-~~~~~~ 137 (292)
T 4dkd_C 60 FQNTGTYRCTEPGDPLGG-SAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRP-LMRHTN 137 (292)
T ss_dssp GGGCSCEEECCCC----C-CEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCC-CCSSCC
T ss_pred cccCEEEEEEEccCCCCc-ceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCc-cccCCc
Confidence 999999999999988876 77788888776653 344556778899999999997542222789999984332 445566
Q ss_pred EEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEcc----CCcccccccCCCCCCCCCcCCCCCCcEEEE
Q psy14896 345 VFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP----HSNFQQLKFPNNFPKTFPEAPKAGDKVRLE 420 (813)
Q Consensus 345 ~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~ 420 (813)
+....++.|.|.++..+|+|.|+|.|.|..+.. .+..+.|.|.. +|.+. . ......+.+|+.+.|.
T Consensus 138 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~--~s~~~~l~V~~~~~~~p~i~-~-------~~~~~~~~~g~~v~l~ 207 (292)
T 4dkd_C 138 YSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKV--MSISIRLKVQKVIPGPPALT-L-------VPAELVRIRGEAAQIV 207 (292)
T ss_dssp EECCSSSCCEETTCCGGGCSEEEEEECSTTSCE--ECCCEEEEEECCCCSSCEEE-E-------ESSCBCCCSSSCEEEE
T ss_pred ccccCCceEEECCCCHHHCeEEEEEEEeCCCce--eEEEEEEEEeCCCCCCCeEE-c-------cCCceeEecCCCEEEE
Confidence 777777889999999999999999999876532 23457888875 22221 1 1122356789999999
Q ss_pred EEEeecCC-CeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcE
Q psy14896 421 CVAFGYPV-PSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSY 499 (813)
Q Consensus 421 C~~~g~p~-p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v 499 (813)
|.+.+.|. +.+.|++++..+.....
T Consensus 208 C~~~~~~~~~~~~w~~~~~~~~~~~~------------------------------------------------------ 233 (292)
T 4dkd_C 208 CSASSVDVNFDVFLQHNNTKLAIPQQ------------------------------------------------------ 233 (292)
T ss_dssp EEEEESSSCCEEECCBSSCCCCCCBE------------------------------------------------------
T ss_pred EEecCCCCceEEEEeCCCcccccCcc------------------------------------------------------
Confidence 99988765 46788888776543210
Q ss_pred EEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeec
Q psy14896 500 EWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFI 568 (813)
Q Consensus 500 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~ 568 (813)
..+.. .+ ....++|.|.++ ..+|+|.|+|.|.|..|.. +..+.|.|...
T Consensus 234 ~~~~~-----------------~~-~~~~~~L~i~~v-~~~d~G~Y~C~a~N~~g~~-~~~~~l~V~~~ 282 (292)
T 4dkd_C 234 SDFHN-----------------NR-YQKVLTLNLDQV-DFQHAGNYSCVASNVQGKH-STSMFFRVVES 282 (292)
T ss_dssp EEEET-----------------TE-EEEEEEEEESSC-CTTSCEEEEEEEECSSCEE-EEEEEECC---
T ss_pred ceecc-----------------ce-eeeEEEEEECcc-ChhcCeEEEEEEecCCCCc-eeEEEEEEeeC
Confidence 00011 01 113457999997 8999999999999999986 44467776544
No 89
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.94 E-value=3.3e-27 Score=245.36 Aligned_cols=217 Identities=14% Similarity=0.189 Sum_probs=164.3
Q ss_pred ceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCc---cEEEEeecccCCeeEEEEEEeeecCccccC
Q psy14896 578 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG---ALYFSALEQIDAGNYSCNVQSKVSDTGRNG 654 (813)
Q Consensus 578 ~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 654 (813)
..+.+|+.++|.|....+.|.+.|+|+|++.+ +..+.++.+..++ +|.|.+++.+|+|.|+|.|.|..|...
T Consensus 11 ~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~--i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~--- 85 (312)
T 2y23_A 11 VNVDDDGVISLNFECDKMTPKSEFSWSKDYVS--TEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS--- 85 (312)
T ss_dssp EEECTTCCEEEEEECSSCCTTCCEEEEETTEE--CTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE---
T ss_pred EEEecCCeEEEEEEEeCCCCCcEEEEEECCEE--CCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE---
Confidence 45678889988888866789999999999986 4445567666554 699999999999999999999887432
Q ss_pred ceeeEEEcc------------CCCccccccCCCCCCCCCcCCCCCCeEEEEEEec-CCCCCeEEEEeCCcccCCCceeee
Q psy14896 655 PFFPLKVFP------------HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF-GYPVPSYNWTRRGSPLPRNAYFEN 721 (813)
Q Consensus 655 ~~~~l~v~~------------~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~-g~P~p~i~W~k~g~~l~~~~~~~~ 721 (813)
.+.|.|.. +|.+... ......+.+|++++|.|.+. |.|.|.++|+|+|..+..+.++..
T Consensus 86 -s~~l~v~~~~~~~~~~~~~~~p~~~~~-------~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~ 157 (312)
T 2y23_A 86 -SYLIDEEELKRLLALSHEHKFPTVPVK-------SELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKM 157 (312)
T ss_dssp -EEEECHHHHHHHHHHHHHHHSCBCCEE-------EEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEE
T ss_pred -EEEEEEeeeeeeecccccCCCCccccc-------cCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEE
Confidence 24455543 3332211 11136688999999999999 899999999999999987654321
Q ss_pred ------cceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEE---------------------cCCcccccCCceeec
Q psy14896 722 ------FNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ---------------------AEPNFTIPLTDKHMD 774 (813)
Q Consensus 722 ------~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~---------------------~~P~~~~~~~~~~~~ 774 (813)
....|.|.+++.+|+|.|+|.|.|..+.. ...+.+. .+|.|...+. ..+.
T Consensus 158 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~v~ 234 (312)
T 2y23_A 158 HIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATN--HSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLS-WEVT 234 (312)
T ss_dssp EEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEE--EEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEE-EEEE
T ss_pred EEccCCCEEEEEEccCCcccCEeEEEEEEeCCceE--EEEEEEcchhhhhhcccccccccchhhccCCceeecce-EEEe
Confidence 23459999999999999999998855444 4444441 2355553333 6788
Q ss_pred CCCeEEEEEEEcccCCc-eEEEEECCEeccccccccc
Q psy14896 775 NQADLTWTCEAFGVPDV-TYSWFRNGELGHQMTDLLL 810 (813)
Q Consensus 775 ~g~~~~l~C~~~g~p~~-~v~W~k~g~~l~~~~~~~i 810 (813)
+|+.+.|.|.+.|.|+| .|.|+|||++|..+.++.+
T Consensus 235 ~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~ 271 (312)
T 2y23_A 235 GECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDF 271 (312)
T ss_dssp TTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC--
T ss_pred CCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEE
Confidence 99999999999999988 9999999999997666544
No 90
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.94 E-value=3.1e-25 Score=238.34 Aligned_cols=357 Identities=14% Similarity=0.122 Sum_probs=218.6
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeec--ccccccccccccccCCCccEEee----CCeEEEcC
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE--DYVQDRLVANLIDPLSDKRFTLS----GGNLIIND 262 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~--g~~l~~~~~~~~~~~~~~~~~~~----~~~l~i~~ 262 (813)
+|.|+. |.+..+.+| +++.|.|.+.|.|.|.|+|+|+ |..+.... ...+.++.+. +++|.|.+
T Consensus 1 ~P~i~~-~~~~~~~~G-----~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~L~i~~ 69 (389)
T 2jll_A 1 QPHIIQ-LKNETTYEN-----GQVTLVCDAEGEPIPEITWKRAVDGFTFTEGD-----KSLDGRIEVKGQHGSSSLHIKD 69 (389)
T ss_dssp CCEEEE-CCCEEEETT-----SEEEEEEEEECSSCCEEEEEETTTTEEECC-------CCSSSSEEEEECSSEEEEEEES
T ss_pred CCeEEe-cCceEEeCC-----CeEEEEEEeecccCCeEEEEeCCCCceeccCc-----CCCCCeEEEeccCCcceEEEcc
Confidence 367776 666777666 7799999999999999999999 77653211 1123455543 35788888
Q ss_pred CccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCC
Q psy14896 263 PRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEED 342 (813)
Q Consensus 263 ~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~ 342 (813)
. +.+|+|.|+|.|.|..|.. +..+.|.|..+|.+........+.+|+.+.|.|.+ .|.|.+.++|+|+|.++.....
T Consensus 70 v-~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~i~W~~~g~~l~~~~~ 146 (389)
T 2jll_A 70 V-KLSDSGRYDCEAASRIGGH-QKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDV-KSNPPASIHWRRDKLVLPAKNT 146 (389)
T ss_dssp C-CGGGCEEEEEEEECSSCEE-EEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECE-EEESCCEEEEEETTEESSCTTC
T ss_pred c-ChhhCEEEEEEEEeCCCCc-ceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEE-EecCCCeEEEEECCccCCcccC
Confidence 5 8999999999999999987 78899999988887665544467889999999985 6889999999999988655544
Q ss_pred ccEEEccC---ccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEE
Q psy14896 343 KRVFVSYD---GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRL 419 (813)
Q Consensus 343 ~~~~~~~~---~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l 419 (813)
.++.+..+ ..|.|.++..+|+|.|+|.|.|..|.... .+.|.+...|.. |.. .......+..+.|
T Consensus 147 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~---~~~l~v~~~P~~-----P~~----~~~~~~~~~~~~l 214 (389)
T 2jll_A 147 TNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQ---EYILALADVPSS-----PYG----VKIIELSQTTAKV 214 (389)
T ss_dssp TTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEE---EEEEEECCCCCC-----CEE----EEEEEECSSCEEE
T ss_pred ceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEE---EEEEEecCCCCC-----Ccc----eEEeeccCCEEEE
Confidence 45555443 36999999999999999999999886432 255555332210 000 0000112233444
Q ss_pred EEEEeecCCCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCC--C
Q psy14896 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPN--P 497 (813)
Q Consensus 420 ~C~~~g~p~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~--~ 497 (813)
.|...... .|.|. .
T Consensus 215 ~w~~p~~~----------------------------------------------------------------~g~pi~~y 230 (389)
T 2jll_A 215 SFNKPDSH----------------------------------------------------------------GGVPIHHY 230 (389)
T ss_dssp EEECCSCC----------------------------------------------------------------TTSCEEEE
T ss_pred EEeCCCCC----------------------------------------------------------------CCcceEEE
Confidence 44321000 00111 1
Q ss_pred cEEEeeccccccceeccccCCCCCceEEe--eCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeeccc-cccc
Q psy14896 498 SYEWFKEDYVQDRLVANLIDPLSDKRFTL--SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE-FNLK 574 (813)
Q Consensus 498 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~-~~~~ 574 (813)
.+.|.+++... ...... ....+.|.++ ...+.|.|+|.|.|..|...... .+.+...+. ....
T Consensus 231 ~v~~~~~~~~~------------~~~~~~~~~~~~~~i~~l-~~~~~y~~~v~A~N~~G~~~~s~-~~~~~t~~~~~p~~ 296 (389)
T 2jll_A 231 QVDVKEVASEI------------WKIVRSHGVQTMVVLNNL-EPNTTYEIRVAAVNGKGQGDYSK-IEIFQTLPVREPSP 296 (389)
T ss_dssp EEEEEETTCSC------------CEEEECSTTCSEEEECSC-CTTCEEEEEEEEEESSCBCCCCC-CEEEECCCCCCCCC
T ss_pred EEEEEECCCcc------------cEEeeccCCcceEEECCc-cCCCEEEEEEEEEcCCccCCCCc-ceEEEecCCCCCCC
Confidence 34455544210 001111 2257889886 89999999999999988753222 122221111 0011
Q ss_pred CCC-ceeccCCCceEEeCCCC--CCCccE--EEEccCCCCCcccCCCeEEEee-CccEEEEeecccCCeeEEEEEEeeec
Q psy14896 575 RAP-EIGNQNWGKAMFCDPPT--NYPGVN--YYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVS 648 (813)
Q Consensus 575 ~~~-~~~~~g~~~~l~C~~~~--~~p~~~--v~W~k~~~~~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~a~n~~g 648 (813)
+.. ........+.|.|..+. +.+... |.|...+.. .......+.. ...+.|.++.......|++.|.|..|
T Consensus 297 p~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G 373 (389)
T 2jll_A 297 PSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKE---DQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLG 373 (389)
T ss_dssp CCEEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC--------CCBCCEECTTCCEEEECSCCTTCEEEEEEEEEC-CC
T ss_pred CccccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCC---cceeEeeccCCcceEEeCCcCCCCEEEEEEEEEcCCc
Confidence 111 11224556788888632 112222 333322210 0000111222 22478889999999999999999998
Q ss_pred Cccc
Q psy14896 649 DTGR 652 (813)
Q Consensus 649 ~~~~ 652 (813)
....
T Consensus 374 ~s~~ 377 (389)
T 2jll_A 374 YSEP 377 (389)
T ss_dssp BCCC
T ss_pred CCCc
Confidence 7433
No 91
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.94 E-value=1.8e-26 Score=236.86 Aligned_cols=261 Identities=13% Similarity=0.115 Sum_probs=173.4
Q ss_pred CCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEccC----ccEEEeeeeecCCeeeEEEEeeecccc
Q psy14896 302 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD----GALYFSALEQIDAGNYSCNVQSKVSDT 377 (813)
Q Consensus 302 ~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~----~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 377 (813)
.....+.+|+.++|.|.+. +. ++|+|++..+. .+.....+ ++|.|.+++.+|+|.|+|.|.|..|..
T Consensus 7 ~~~~~v~~G~~v~L~C~~~-~~----v~W~~~~~~~~----~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~ 77 (289)
T 3mjg_X 7 GPELVLNVSSTFVLTCSGS-AP----VVWERMSQEPP----QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLE 77 (289)
T ss_dssp CSEEECCTTCCEEEEEEES-SC----CEEEBTTBCCS----EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC-----
T ss_pred CCeEEEeCCCcEEEEEecc-ce----EEEECCCCCcc----cceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCC
Confidence 3445678899999999964 32 99999998752 23344333 479999999999999999999988753
Q ss_pred CCCCCceeeEEccCCcccccccCCCCCCCCC---cCCCCCCcEEEEEEEeecCCCeeeEeecCCcCCCCceeccccceEE
Q psy14896 378 GRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP---EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILT 454 (813)
Q Consensus 378 ~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~---~~v~~g~~~~l~C~~~g~p~p~i~W~~~~~~l~~~~~~~~~~~~l~ 454 (813)
...+..+.|.|..+.. ..++.... ..+.+|+.+.|.|.+. .|.|.++|++.+.......
T Consensus 78 ~~~~~~~~v~v~~p~~-------~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~---------- 139 (289)
T 3mjg_X 78 TDERKRLYIFVPDPTV-------GFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPV---------- 139 (289)
T ss_dssp -CCCEEEEEECCCTTC-------CBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCC----------
T ss_pred cCcEEeEEEEEECCCc-------CcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccce----------
Confidence 3333334444432211 01111111 3588999999999998 6788888887642211000
Q ss_pred EcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEe
Q psy14896 455 IPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN 534 (813)
Q Consensus 455 i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 534 (813)
.| ... ..+.
T Consensus 140 ---------------------------------------------~~-----------------------~~~-~~~~-- 148 (289)
T 3mjg_X 140 ---------------------------------------------PY-----------------------DHQ-RGFS-- 148 (289)
T ss_dssp ---------------------------------------------CE-----------------------ETT-TEEE--
T ss_pred ---------------------------------------------ee-----------------------cCC-cCee--
Confidence 00 000 0011
Q ss_pred CCCCCCCCceEEEEEEcCceeEEeecEEEEEee--cccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcc
Q psy14896 535 DPRQVEDRGSYHCKASNKFGSIISESVQLAFGF--IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV 612 (813)
Q Consensus 535 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~ 612 (813)
...|+|.|+|.|.|..+...+..+.|.|.. +|.+........+.+|+.++|.|.+ .+.|.+.|+|++++.....
T Consensus 149 ---~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~-~g~p~p~v~W~~~~~~~~~ 224 (289)
T 3mjg_X 149 ---GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIV-IGNEVVNFEWTYPRKESGR 224 (289)
T ss_dssp ---ECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEE-ESCSSBEEEEECTTSSSSC
T ss_pred ---eeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEE-CCCCCcceEEEcCCccCCC
Confidence 246899999999998888777777777765 5555555566778899999999999 7899999999988764322
Q ss_pred cCCCeEEEe------eCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCc
Q psy14896 613 EEDKRVFVS------YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF 667 (813)
Q Consensus 613 ~~~~~~~~~------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~ 667 (813)
......... ..++|.|.+++.+|+|.|+|.|.|..|..... +.|.|...+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~---~~l~v~~~~~~ 282 (289)
T 3mjg_X 225 LVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDE---KAINITVVESG 282 (289)
T ss_dssp CCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEE---EEEEEEEEC--
T ss_pred cccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeE---EEEEEEEEecC
Confidence 111112221 23569999999999999999999999876543 67777766543
No 92
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.94 E-value=1.8e-25 Score=231.25 Aligned_cols=265 Identities=18% Similarity=0.231 Sum_probs=193.2
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEe---eCC--eEEEcC
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL---SGG--NLIIND 262 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~---~~~--~l~i~~ 262 (813)
.+|.|+..|.+..+.+| ++++|.|.+.|.|.+.|.|+|+|..+. ..+.++.. .++ +|.|.+
T Consensus 3 ~~P~~~~~p~~~~v~~G-----~~v~l~C~~~g~p~~~v~W~~~~~~~~---------~~~~~~~~~~~~~~~~~L~i~~ 68 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQ-----SNATLVCKVTGHPKPIVKWYRQGKEII---------ADGLKYRIQEFKGGYHQLIIAS 68 (305)
T ss_dssp CCCEEEECCCCEEECTT-----CCEEEEEEEECSSCCEEEEEETTEECC---------CCSSSEEEEEETTTEEEEEESS
T ss_pred CCCeeeecccceEEeCC-----CcEEEEEEEeCCCCCeEEEEECCEEcc---------cCCCeEEEEECCCCEEEEEEcc
Confidence 47999999999998887 669999999999999999999998763 12223332 233 688887
Q ss_pred CccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccC-----CCCceeecCCCeEEEecCCCCCCcceEEEeeccccc
Q psy14896 263 PRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-----RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPN 337 (813)
Q Consensus 263 ~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~-----~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~ 337 (813)
. +.+|+|.|+|.|.|..|.. +..+.|.|..+|.+... .....+..|+.+.|.|.+ .|.|.+.+.|++++..+
T Consensus 69 v-~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~~~~~~~ 145 (305)
T 2nzi_A 69 V-TDDDATVYQVRATNQGGSV-SGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPF-SGKPDPVITWQKGQDLI 145 (305)
T ss_dssp C-CGGGCSEEEEEEEETTEEE-EEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEE-EEESCCEEEEEESSSBC
T ss_pred C-ChhhCeEEEEEEEcCCCCc-cceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEE-CCCCCCEEEEEECCEEC
Confidence 5 8999999999999999986 77888888877664432 245667789999999995 78899999999999875
Q ss_pred cccCCccEEEc---cCccEEEee-eeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCC
Q psy14896 338 FVEEDKRVFVS---YDGALYFSA-LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA 413 (813)
Q Consensus 338 ~~~~~~~~~~~---~~~~L~i~~-v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~ 413 (813)
. ...++.+. ..+.|.|.+ +..+|+|.|+|.|.|..|.... .+.|.|...|... .. .......
T Consensus 146 ~--~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~---~~~l~v~~~P~~p-----~~----~~~~~~~ 211 (305)
T 2nzi_A 146 D--NNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQK---TVELDVADVPDPP-----RG----VKVSDVS 211 (305)
T ss_dssp C--SSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEE---EEEEEEEBCCCCC-----EE----EEEESCC
T ss_pred C--CCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceee---EEEEEEecCCCCC-----CC----ceeeecc
Confidence 3 33343333 234799999 9999999999999999886433 3677776543211 00 0001123
Q ss_pred CCcEEEEEEEeecCCCeeeEeecCCcCCCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeec
Q psy14896 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGG 493 (813)
Q Consensus 414 g~~~~l~C~~~g~p~p~i~W~~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g 493 (813)
+..+.| .|.... ..|....+.|.+..
T Consensus 212 ~~~v~l------------~w~~p~------------------------------------------~~g~~~i~~y~v~~ 237 (305)
T 2nzi_A 212 RDSVNL------------TWTEPA------------------------------------------SDGGSKITNYIVEK 237 (305)
T ss_dssp SSCEEE------------EEECCS------------------------------------------CCSBSCEEEEEEEE
T ss_pred CCEEEE------------EEcCCc------------------------------------------cCCCCceeEEEEEE
Confidence 344444 443211 12344567788888
Q ss_pred cCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEE
Q psy14896 494 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSII 557 (813)
Q Consensus 494 ~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~ 557 (813)
.|.+...|.+.+.. ....+.|.++ ...+.|.|+|.|.|..|...
T Consensus 238 ~~~~~~~w~~~~~~-------------------~~~~~~i~~l-~~~~~y~~~~~A~N~~G~~~ 281 (305)
T 2nzi_A 238 CATTAERWLRVGQA-------------------RETRYTVINL-FGKTSYQFRVIAENKFGLSK 281 (305)
T ss_dssp EETTSCCEEEEEEE-------------------SSSEEEECSC-CSSCEEEEEEEEEETTEECC
T ss_pred ecCCCCccEECccc-------------------cCceEEecCC-CCCCeEEEEEEEEeCCcccC
Confidence 88888999887621 1567899997 89999999999999999753
No 93
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.94 E-value=3.7e-25 Score=237.67 Aligned_cols=285 Identities=16% Similarity=0.219 Sum_probs=198.8
Q ss_pred ccccCeEEEEEeeccCCCcEEEeec--cccccceeccccCCCCCceEEee----CCeEEEeCCCCCCCCceEEEEEEcCc
Q psy14896 480 SILNDITLSCYAGGYPNPSYEWFKE--DYVQDRLVANLIDPLSDKRFTLS----GGNLIINDPRQVEDRGSYHCKASNKF 553 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p~~~v~W~k~--~~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~~d~G~Y~C~a~n~~ 553 (813)
.+|+.++|.|.+.|.|.|.|.|+|+ |..+... ......++.+. .++|.|.++ ..+|+|.|+|.|.|..
T Consensus 13 ~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~L~i~~v-~~~D~G~Y~C~a~n~~ 86 (389)
T 2jll_A 13 YENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEG-----DKSLDGRIEVKGQHGSSSLHIKDV-KLSDSGRYDCEAASRI 86 (389)
T ss_dssp ETTSEEEEEEEEECSSCCEEEEEETTTTEEECC-------CCSSSSEEEEECSSEEEEEEESC-CGGGCEEEEEEEECSS
T ss_pred eCCCeEEEEEEeecccCCeEEEEeCCCCceeccC-----cCCCCCeEEEeccCCcceEEEccc-ChhhCEEEEEEEEeCC
Confidence 6799999999999999999999999 7554211 01113344443 358999997 9999999999999999
Q ss_pred eeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCc---cEEEEe
Q psy14896 554 GSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG---ALYFSA 630 (813)
Q Consensus 554 g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~---~L~i~~ 630 (813)
|.. +..+.|.|..+|.+........+.+|+.++|.|.+ .|.|.+.|+|+|+|.++......++.+..++ +|.|.+
T Consensus 87 g~~-~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~ 164 (389)
T 2jll_A 87 GGH-QKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDV-KSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAP 164 (389)
T ss_dssp CEE-EEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECE-EEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECC
T ss_pred CCc-ceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEE-EecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECC
Confidence 987 56689999999887665544467889999999999 7899999999999987544444456555443 599999
Q ss_pred ecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEec----CCCCC--eE
Q psy14896 631 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF----GYPVP--SY 704 (813)
Q Consensus 631 ~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~----g~P~p--~i 704 (813)
+..+|+|.|+|.|.|..|.... .+.|.+...|.... ........+..+.|.|... |.|.. .+
T Consensus 165 ~~~~d~G~Y~C~a~N~~G~~~~---~~~l~v~~~P~~P~---------~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v 232 (389)
T 2jll_A 165 TSDNDFGRYNCTATNHIGTRFQ---EYILALADVPSSPY---------GVKIIELSQTTAKVSFNKPDSHGGVPIHHYQV 232 (389)
T ss_dssp CSTTSSEEEEEEEEETTEEEEE---EEEEEECCCCCCCE---------EEEEEEECSSCEEEEEECCSCCTTSCEEEEEE
T ss_pred CChhhCEEEEEEEEcCCCcEEE---EEEEEecCCCCCCc---------ceEEeeccCCEEEEEEeCCCCCCCcceEEEEE
Confidence 9999999999999999987543 35666655543221 0001123457889999742 33433 57
Q ss_pred EEEeCCcccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCc-ccccCCcee-ecCCCeEEEE
Q psy14896 705 NWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPN-FTIPLTDKH-MDNQADLTWT 782 (813)
Q Consensus 705 ~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~-~~~~~~~~~-~~~g~~~~l~ 782 (813)
.|.+++...-...........|.|.++...|.|.|+|.|.|..|....+..+.+...|. .+..+.... ...+..+.|.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~p~~p~~~~~~~~~~~v~l~ 312 (389)
T 2jll_A 233 DVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLS 312 (389)
T ss_dssp EEEETTCSCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCCCCCCCCCEEEEEETTTEEEEE
T ss_pred EEEECCCcccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCCCCCCCCccccccCcCCEEEEE
Confidence 88888763322111122346799999999999999999999999765544455543222 122221111 2245566666
Q ss_pred EE
Q psy14896 783 CE 784 (813)
Q Consensus 783 C~ 784 (813)
..
T Consensus 313 W~ 314 (389)
T 2jll_A 313 IT 314 (389)
T ss_dssp EC
T ss_pred EE
Confidence 65
No 94
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.93 E-value=3.9e-25 Score=228.80 Aligned_cols=247 Identities=17% Similarity=0.222 Sum_probs=177.3
Q ss_pred EEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEe---eCC--eEEEeCCCCC
Q psy14896 465 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL---SGG--NLIINDPRQV 539 (813)
Q Consensus 465 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~---~~~--~l~i~~~~~~ 539 (813)
+...|.++.+ .+|+.++|.|.+.|.|.+.+.|+|+|..+. . ...++.+ .++ +|.|.++ ..
T Consensus 7 ~~~~p~~~~v-----~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~--------~-~~~~~~~~~~~~~~~~L~i~~v-~~ 71 (305)
T 2nzi_A 7 FKEELRNLNV-----RYQSNATLVCKVTGHPKPIVKWYRQGKEII--------A-DGLKYRIQEFKGGYHQLIIASV-TD 71 (305)
T ss_dssp EEECCCCEEE-----CTTCCEEEEEEEECSSCCEEEEEETTEECC--------C-CSSSEEEEEETTTEEEEEESSC-CG
T ss_pred eeecccceEE-----eCCCcEEEEEEEeCCCCCeEEEEECCEEcc--------c-CCCeEEEEECCCCEEEEEEccC-Ch
Confidence 3344444444 789999999999999999999999996542 1 1222222 233 8999997 99
Q ss_pred CCCceEEEEEEcCceeEEeecEEEEEeeccccccc-----CCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccC
Q psy14896 540 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-----RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE 614 (813)
Q Consensus 540 ~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~-----~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~ 614 (813)
+|+|.|+|.|.|..|.. +..+.|.|..+|.+... .....+..|+.++|.|.+ .|.|.+.+.|+|++..+ ..
T Consensus 72 ~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~~~~~~~--~~ 147 (305)
T 2nzi_A 72 DDATVYQVRATNQGGSV-SGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPF-SGKPDPVITWQKGQDLI--DN 147 (305)
T ss_dssp GGCSEEEEEEEETTEEE-EEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEE-EEESCCEEEEEESSSBC--CS
T ss_pred hhCeEEEEEEEcCCCCc-cceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEE-CCCCCCEEEEEECCEEC--CC
Confidence 99999999999998886 55678888777654332 234556789999999999 79999999999999763 33
Q ss_pred CCeEEEee---CccEEEEe-ecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeE
Q psy14896 615 DKRVFVSY---DGALYFSA-LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV 690 (813)
Q Consensus 615 ~~~~~~~~---~~~L~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v 690 (813)
..++.+.. .++|.|.+ +..+|+|.|+|.|.|..|.... .+.|.|...|...... ......+..+
T Consensus 148 ~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~---~~~l~v~~~P~~p~~~---------~~~~~~~~~v 215 (305)
T 2nzi_A 148 NGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQK---TVELDVADVPDPPRGV---------KVSDVSRDSV 215 (305)
T ss_dssp SSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEE---EEEEEEEBCCCCCEEE---------EEESCCSSCE
T ss_pred CCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceee---EEEEEEecCCCCCCCc---------eeeeccCCEE
Confidence 44444432 34699999 9999999999999999987543 4677877665432110 0111233444
Q ss_pred E--------------EEEEecCCCCCeEEEEeCCcccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCCceE
Q psy14896 691 R--------------LECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 751 (813)
Q Consensus 691 ~--------------l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 751 (813)
. +.|.+.+.|.+...|.+.+... ...|.|.++...|.|.|+|.|.|..|...
T Consensus 216 ~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~~~---------~~~~~i~~l~~~~~y~~~~~A~N~~G~~~ 281 (305)
T 2nzi_A 216 NLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQAR---------ETRYTVINLFGKTSYQFRVIAENKFGLSK 281 (305)
T ss_dssp EEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEEES---------SSEEEECSCCSSCEEEEEEEEEETTEECC
T ss_pred EEEEcCCccCCCCceeEEEEEEecCCCCccEECcccc---------CceEEecCCCCCCeEEEEEEEEeCCcccC
Confidence 4 4555555555555666544322 55799999999999999999999998654
No 95
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.93 E-value=2.1e-26 Score=240.03 Aligned_cols=249 Identities=17% Similarity=0.242 Sum_probs=157.4
Q ss_pred cCeEEEEEeecc-C-CCcEEEeeccccccceecc-ccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCceeEEee
Q psy14896 483 NDITLSCYAGGY-P-NPSYEWFKEDYVQDRLVAN-LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISE 559 (813)
Q Consensus 483 ~~~~l~C~~~g~-p-~~~v~W~k~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~ 559 (813)
+.++|.|.+.|. | .+.|+|+|+|..+...... ..... ...+. ..+.|.|... ..+|+|.|+|.|.|..+.....
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~-~g~~~-~~s~l~i~~~-~~~d~g~Y~C~a~n~~~~~~~~ 101 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQE-GELAS-TQSELTLSQK-HWLSDRTYTCQVTYQGHTFEDS 101 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEE-TTEEE-EEEEEEEEHH-HHHTTCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCcc-CCcEE-EEEEEEEcHH-HcCCCCcEEEEEEeCCCCccee
Confidence 689999999986 4 4789999999765321100 00000 11111 1235777764 6779999999999988764321
Q ss_pred cEEEEE---eecccc-cccCCCceeccCCCceEEeCCCCCCCcc---EEEEccCCCCCcccCCCeEEE-------eeCcc
Q psy14896 560 SVQLAF---GFIGEF-NLKRAPEIGNQNWGKAMFCDPPTNYPGV---NYYWARDYFPNFVEEDKRVFV-------SYDGA 625 (813)
Q Consensus 560 ~~~l~v---~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~~---~v~W~k~~~~~~~~~~~~~~~-------~~~~~ 625 (813)
+.+.+ ...|.+ ...+....+.+|+.++|.|.+....|.+ .|+|+|++... +........ ..+++
T Consensus 102 -~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~-~~~~~~~~~~~~~g~~~~~~~ 179 (323)
T 2wqr_A 102 -TKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKP-VNHSTRKEEKQRNGTLTVTST 179 (323)
T ss_dssp -ECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCC-CCCCCCEEEECTTSCEEEEEE
T ss_pred -eecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcc-cccccCCCccCCCCCEEEEEE
Confidence 21100 111222 2222233467899999999984335656 99999975322 211111111 12346
Q ss_pred EEEEeecccCCeeEEEEEEeeecCccccCceeeEEEc------cCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC
Q psy14896 626 LYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF------PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY 699 (813)
Q Consensus 626 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~------~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~ 699 (813)
|.|.++..+|+|.|+|.|.|..+.. ...+.|. .+|.+.....+ .....|+.++|.|.+.|.
T Consensus 180 L~I~~~~~~D~G~Y~C~a~n~~~~~-----~~~~~v~~~~~~~~~P~v~~~~~~--------~~~~~g~~~~l~C~~~g~ 246 (323)
T 2wqr_A 180 LPVGTRDWIEGETYQCRVTHPHLPR-----ALMRSTTKTSGPRAAPEVYAFATP--------EWPGSRDKRTLACLIQNF 246 (323)
T ss_dssp EECCHHHHHTTCCEEEEEECTTSSS-----CEEEEECCCCSCCBCCEEEEEECC--------CCTTCTTEEEEEEEEEEE
T ss_pred EEECHHHccCCCCEEEEEECCCCCC-----CeeeEEEccCCCCCCCEEEEeCCC--------hHHhcCCcEEEEEEeeee
Confidence 9999999999999999999986422 1234442 23332221111 112239999999999984
Q ss_pred -CCC-eEEEEeCCcccCCCcee------e-----ecceEEEECCCCCCCCEEEEEEEEcCCCc
Q psy14896 700 -PVP-SYNWTRRGSPLPRNAYF------E-----NFNRILTIPNVKVEDQGEYICRASNDRSA 749 (813)
Q Consensus 700 -P~p-~i~W~k~g~~l~~~~~~------~-----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 749 (813)
|++ .|+|+|||.+|..+... . ...+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 247 ~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 247 MPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp BSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred eCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 443 89999999988654321 0 11357999999999999999999999876
No 96
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.92 E-value=1.1e-24 Score=229.28 Aligned_cols=256 Identities=16% Similarity=0.214 Sum_probs=162.0
Q ss_pred ccccCeEEEEEeeccC--CCcEEEeec--cccccceecc-------ccCCCCCceEEee------CCeEEEeCCCCCCCC
Q psy14896 480 SILNDITLSCYAGGYP--NPSYEWFKE--DYVQDRLVAN-------LIDPLSDKRFTLS------GGNLIINDPRQVEDR 542 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p--~~~v~W~k~--~~~~~~~~~~-------~~~~~~~~~~~~~------~~~l~i~~~~~~~d~ 542 (813)
.+|+.++|.|.+.+.+ .+.|.|+|+ |..+..+... ........|+.+. ..+|.|.++ +.+|+
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v-~~~D~ 91 (344)
T 1za6_B 13 KPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSL-RSEDT 91 (344)
T ss_dssp CTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSC-CGGGC
T ss_pred eCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCC-CcccC
Confidence 7899999999999874 678999997 4332211100 0011223455443 148999997 99999
Q ss_pred ceEEEEEEcCceeEEeecEEEEEee----cccccccCCCceeccCCCceEEeCCCCCCCc-cEEEEccCCCCCccc----
Q psy14896 543 GSYHCKASNKFGSIISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVE---- 613 (813)
Q Consensus 543 G~Y~C~a~n~~g~~~s~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~v~W~k~~~~~~~~---- 613 (813)
|.|+|.|.|..+.. ...+.|.|.. +|.+........+.+|+.++|.|.+....|. +.|+|+|+|.++...
T Consensus 92 G~Y~C~~~n~~~~~-~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~ 170 (344)
T 1za6_B 92 AVYFCTRSLNMAYW-GQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPA 170 (344)
T ss_dssp EEEEEEETTTTCEE-CCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCC
T ss_pred EEEEEEEecCccee-cCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCC
Confidence 99999999965433 3446677752 2333322223345789999999999433465 799999999753211
Q ss_pred ---CCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecCccccCceeeE----------------------EEccCCCcc
Q psy14896 614 ---EDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL----------------------KVFPHSNFQ 668 (813)
Q Consensus 614 ---~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l----------------------~v~~~p~~~ 668 (813)
.+.++.. .+.|.|.++..+| |.|+|.|.|..|..... ..+.+ .+..+|.+.
T Consensus 171 ~~~~~~~~~~--~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~ 246 (344)
T 1za6_B 171 VLQSSGLYSL--SSVVTVPSSSLGT-QTYICNVNHKPSNTKVD-KKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVY 246 (344)
T ss_dssp EECTTSCEEE--EEEEEEETTHHHH-BCEEEEEEEGGGTEEEE-EEECCCCC--------------------CCBCCEEE
T ss_pred eECCCCCEEE--EEEEEEcHHHcCC-CcEEEEEEeCCCCccce-EeecccccccccccCCCCCCccccccCCCCcCCEEE
Confidence 1112211 2368999999888 99999999998753211 00110 111222221
Q ss_pred ccccCCCCCCCCCcCCCCCCeEEEEEEecCC-C-CCeEEEEeCCcccCCCceee---ec------ceEEEECCCCCCCCE
Q psy14896 669 QLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-P-VPSYNWTRRGSPLPRNAYFE---NF------NRILTIPNVKVEDQG 737 (813)
Q Consensus 669 ~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P-~p~i~W~k~g~~l~~~~~~~---~~------~~~L~i~~v~~~d~G 737 (813)
.. + + . .....|+.++|.|.+.|. | .+.|+|+|||..+....... .. .+.|.|.....+|+|
T Consensus 247 ~~--~----~-~-~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g 318 (344)
T 1za6_B 247 TL--P----P-S-RDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGN 318 (344)
T ss_dssp EE--C----C-C-GGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTC
T ss_pred Ee--C----C-C-hHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCC
Confidence 11 0 0 0 112346679999999996 4 35899999999886543211 11 235777777778899
Q ss_pred EEEEEEEcCCCc
Q psy14896 738 EYICRASNDRSA 749 (813)
Q Consensus 738 ~Y~C~a~N~~G~ 749 (813)
.|+|.|.|....
T Consensus 319 ~YtC~a~~~~l~ 330 (344)
T 1za6_B 319 VFSCSVMHEALH 330 (344)
T ss_dssp EEEEEEECTTST
T ss_pred eEEEEEEcCCCC
Confidence 999999997543
No 97
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.92 E-value=7.1e-25 Score=210.65 Aligned_cols=185 Identities=17% Similarity=0.213 Sum_probs=145.8
Q ss_pred cccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEe--eCc--cEEEEeecccCCeeEEEEE
Q psy14896 568 IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS--YDG--ALYFSALEQIDAGNYSCNV 643 (813)
Q Consensus 568 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~--~~~--~L~i~~~~~~d~G~Y~C~a 643 (813)
+|.+...+....+.+|+.++|.|.+ .+.|.+.+.|+|++.++.. ...++.+. .++ +|.|.+++.+|+|.|+|.|
T Consensus 4 ~P~~~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (197)
T 2j8h_A 4 APHFKEELRNLNVRYQSNATLVCKV-TGHPKPIVKWYRQGKEIIA-DGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (197)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEE-ECSSCCEEEEEETTEECCC-CSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEE
T ss_pred CCEEEEcCCccEEcCCCEEEEEEEE-eecCCCEEEEEECCEECcc-CCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEE
Confidence 4556556667788999999999999 6889999999999976433 23344443 234 7999999999999999999
Q ss_pred EeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceee---
Q psy14896 644 QSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--- 720 (813)
Q Consensus 644 ~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~--- 720 (813)
.|..|.. ...+.|.|..+|.+.. |..........+.+|+.++|.|.+.|.|.|.|+|+|+|..+..+.++.
T Consensus 82 ~n~~g~~---~~~~~l~V~~~p~~~~---~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~ 155 (197)
T 2j8h_A 82 TNQGGSV---SGTASLEVEVPAKIHL---PKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIV 155 (197)
T ss_dssp EETTEEE---EEEEEEEEEEEEEECC---SSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEE
T ss_pred EECCCce---eEEEEEEEcCCCcCCC---CccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEE
Confidence 9988764 3346788877665432 222222233567889999999999999999999999999987665443
Q ss_pred -ecceEEEECC-CCCCCCEEEEEEEEcCCCceEEEEEEEEEc
Q psy14896 721 -NFNRILTIPN-VKVEDQGEYICRASNDRSALESSVTISIQA 760 (813)
Q Consensus 721 -~~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 760 (813)
.....|.|.+ +..+|+|.|+|.|.|..|..+.++.|.|.+
T Consensus 156 ~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~d 197 (197)
T 2j8h_A 156 TRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD 197 (197)
T ss_dssp CSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEeC
Confidence 2356899999 999999999999999999999999999863
No 98
>2py2_A Antifreeze protein type II; type II antifreeze protein; 1.70A {Clupea harengus}
Probab=99.92 E-value=6.2e-25 Score=195.23 Aligned_cols=128 Identities=16% Similarity=0.288 Sum_probs=110.9
Q ss_pred CCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEc
Q psy14896 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (813)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~ 106 (813)
..||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||.+++.... ..+||||.+...++.|.|+
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~--~~~WIGl~~~~~~~~w~W~ 78 (136)
T 2py2_A 2 DECPTDWKMFNGRCFLFNPLQ-LHWADAQESCMKEGANLASIHSLEESTFVKELTSADL--IPSWIGGTDCQVSTRWFWM 78 (136)
T ss_dssp --CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTTCEECCCCSHHHHHHHHTTSTTTT--CCEEEEEECCSSTTCCEET
T ss_pred CCCCcCceecCCEEEEEECCC-cCHHHHHHHHhhCCCEEeeeCCHHHHHHHHHHHHcCC--CCEeEeeEcCCCCCceEeC
Confidence 369999999999999999985 9999999999999999999999999999999874421 6899999998889999999
Q ss_pred CCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeecc
Q psy14896 107 DGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 161 (813)
Q Consensus 107 dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~~ 161 (813)
||++++| .+|..++|++...++|+.|..... ..|.+..|.....|+|+...
T Consensus 79 dG~~~~y-~~W~~geP~~~~~~~Cv~~~~~~~---~~W~d~~C~~~~~fIC~~~~ 129 (136)
T 2py2_A 79 DSTSMDY-ADWCAAQPDTTLTECCIQMNVGIG---KCWNDTPCTHLHSSICAKPL 129 (136)
T ss_dssp TCCCCCC-CCBCTTCCCCCGGGCEEEEEETTT---TEEEEECTTSCEEEEEEEEC
T ss_pred CCCCccc-CCCCCCCCCCCCCCCCeEEccCCC---CeEcCCCCCCCccEEeeECc
Confidence 9999987 677777998766689999976532 34559999999999999953
No 99
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.92 E-value=7.6e-25 Score=210.79 Aligned_cols=175 Identities=14% Similarity=0.145 Sum_probs=127.4
Q ss_pred CceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeC---c--cEEEEeecccCCeeEEEEEEeeecCcc
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD---G--ALYFSALEQIDAGNYSCNVQSKVSDTG 651 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~---~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 651 (813)
...+.+|+.+.|.|.+..+.|.|.|+|+|||.++. .+.++.+..+ + +|.|.+++.+|+|.|+|.|.| |.+.
T Consensus 11 ~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~--~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~ 86 (207)
T 3rbs_A 11 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIF--EGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKAT 86 (207)
T ss_dssp EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEEC--SSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEE
T ss_pred ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECc--cCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeE
Confidence 35577899999999996678999999999998743 3334433333 3 599999999999999999999 4332
Q ss_pred ccCceeeEEEccCCC--------cc-----ccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CCCeEEEEeCCcccCCCc
Q psy14896 652 RNGPFFPLKVFPHSN--------FQ-----QLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVPSYNWTRRGSPLPRNA 717 (813)
Q Consensus 652 ~~~~~~~l~v~~~p~--------~~-----~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~p~i~W~k~g~~l~~~~ 717 (813)
.. ..+.+..... .. ....|.+...+ ...+.+|++++|.|.+.|. |.|.|+|+|||.+|..+.
T Consensus 87 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~ 162 (207)
T 3rbs_A 87 NH---STVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE 162 (207)
T ss_dssp EE---EEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCC
T ss_pred EE---EEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCC
Confidence 21 2222110000 00 00011111111 2567899999999999999 999999999999997765
Q ss_pred eee--ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEE
Q psy14896 718 YFE--NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 759 (813)
Q Consensus 718 ~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 759 (813)
++. ....+|.|.+++.+|+|.|+|+|.|.+|.+++++.|+++
T Consensus 163 ~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 163 KHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp CCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 543 234579999999999999999999999999999998764
No 100
>3vpp_A C-type lectin domain family 9 member A; dendritic cell, C-type lectin-like domain, membrane, immune; 1.64A {Homo sapiens}
Probab=99.92 E-value=8.4e-25 Score=193.90 Aligned_cols=126 Identities=20% Similarity=0.295 Sum_probs=104.6
Q ss_pred cCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEE
Q psy14896 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (813)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W 105 (813)
|..||.||..|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||..++........+||||.+...++.|.|
T Consensus 1 c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~w~W 79 (132)
T 3vpp_A 1 SSPCPNNWIQNRESCYYVSEIW-SIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYDYWVGLSQDGHSGRWLW 79 (132)
T ss_dssp -CCSCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHTTSSSCCEEEEEEEECTTTCCEEE
T ss_pred CCCCCccceEeCCEEEEEECCc-cCHHHHHHHHHhcCCEEeEECCHHHHHHHHHHHhccCCCccEEEEecccCCCCceEe
Confidence 4579999999999999999995 999999999999999999999999999999988554445689999999988899999
Q ss_pred cCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 106 ~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.||+++.+ .+|..+|++...++|+.|.. + . |.+..|.....|+|++.
T Consensus 80 ~dg~~~~~--~~w~~~~p~~~~~~C~~~~~--~--~--w~~~~C~~~~~fiCe~~ 126 (132)
T 3vpp_A 80 QDGSSPSP--GLLPAERSQSANQVCGYVKS--N--S--LLSSNCDTWKYFICEKY 126 (132)
T ss_dssp TTSCCCCT--TSCCCC------CEEEEEET--T--E--EEEEESSSCBEEEEEEE
T ss_pred cCCCcCCh--hhcccCCCCCCCCceEEEEC--C--e--EeccCCCCCceEECCcc
Confidence 99999987 45666444456789999853 2 3 45999999999999995
No 101
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.91 E-value=1.3e-24 Score=207.32 Aligned_cols=184 Identities=21% Similarity=0.317 Sum_probs=144.6
Q ss_pred ccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeec
Q psy14896 569 GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVS 648 (813)
Q Consensus 569 p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 648 (813)
|.|...+.+..+.+|+.++|.|.+ .+.|.+.+.|+|++..+......++....+++|.|.+++.+|+|.|+|.|.|..+
T Consensus 3 ~~~~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 81 (189)
T 2v5t_A 3 LTFREVVSPQEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEAR 81 (189)
T ss_dssp CEEEECCSSEEEETTSCEEECCEE-ECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTT
T ss_pred ceeeccCCCEEEeCCCcEEEEEEE-cCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCC
Confidence 445555667788999999999999 6889999999999987655567788888889999999999999999999999875
Q ss_pred CccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCcee--eecceEE
Q psy14896 649 DTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF--ENFNRIL 726 (813)
Q Consensus 649 ~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~--~~~~~~L 726 (813)
... ....+.+.|..+|.+... .......+.+|+.++|.|.+.|.|.|.|+|+|+|..+..+.++ ......|
T Consensus 82 ~~~-~~~~~~l~v~~~p~~~~~------~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L 154 (189)
T 2v5t_A 82 GEI-DFRDIIVIVNVPPAISMP------QKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTEL 154 (189)
T ss_dssp TEE-EEEEEEEEEEEEEEEECS------CCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEE
T ss_pred Cce-EEEEEEEEecCCCCcccc------cccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEE
Confidence 432 223456777766654321 1111246789999999999999999999999999998776544 3345789
Q ss_pred EECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEc
Q psy14896 727 TIPNVKVEDQGEYICRASNDRSALESSVTISIQA 760 (813)
Q Consensus 727 ~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 760 (813)
+|.++..+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 155 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~v 188 (189)
T 2v5t_A 155 TVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV 188 (189)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEcCCChhhCeeEEEEEEeCCCceeEEEEEEEEe
Confidence 9999999999999999999999999999998863
No 102
>3bx4_B Aggretin beta chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_B
Probab=99.91 E-value=5.3e-25 Score=198.83 Aligned_cols=120 Identities=23% Similarity=0.369 Sum_probs=104.4
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEE
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W 105 (813)
.||.||..|+++||+++.+. ++|.+|+..|+. .||+||+|+|++|++||.+++........+||||.+...++.|.|
T Consensus 24 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W 102 (146)
T 3bx4_B 24 DCPSGWSSYEGHCYKPFNEP-KNWADAERFCKLQPKHSHLVSFQSAEEADFVVKLTRPRLKANLVWMGLSNIWHGCNWQW 102 (146)
T ss_dssp -CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHSSSCCEECCCSSHHHHHHHHHHHTTTTTTSEEECSCCCTTSSSCEEE
T ss_pred CCCcCcEeeCCEEEEEECCC-cCHHHHHHHHhccCCCceEeccCCHHHHHHHHHHHhhcCCCCCEEEecccCCCCCceEe
Confidence 79999999999999999984 999999999999 599999999999999999998543235689999999888899999
Q ss_pred cCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 106 ~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.||++++| .+|. ++| +|+.|....+ .|.+..|.....|+|+.+
T Consensus 103 ~dg~~~~~-~~W~-g~P------~C~~~~~~~g----~w~~~~C~~~~~~ICe~~ 145 (146)
T 3bx4_B 103 SDGARLNY-KDWQ-EQS------ECLAFRGVHT----EWLNMDCSSTCSFVCKFK 145 (146)
T ss_dssp TTCCCCCS-CCBC-SCC------EEEEEETTCC----CEEEEETTSCEEEEEEEE
T ss_pred CCCCcccc-cCcC-CCC------CceEEECCCC----eEecCCCCCCcceEEeec
Confidence 99999988 6777 777 8999876533 445999999999999974
No 103
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.91 E-value=2e-24 Score=207.59 Aligned_cols=185 Identities=20% Similarity=0.268 Sum_probs=147.5
Q ss_pred eecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCc---cEEEEeecccCCeeEEEE
Q psy14896 566 GFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG---ALYFSALEQIDAGNYSCN 642 (813)
Q Consensus 566 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~ 642 (813)
..+|.+...+....+.+|+.++|.|.+ .+.|.+.+.|+|++.+ +....++.+..++ +|.|.+++.+|+|.|+|.
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~--~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 81 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQI-VGRPLPDIKWYRFGKE--LIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCI 81 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEE-EEESCCEEEEEETTEE--ECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEE
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEE-ecCCCCEEEEEECCEE--CCCCccEEEEeCCCEEEEEEecCCccCCEEEEEE
Confidence 455666666677788899999999999 6889999999999976 4445666666666 699999999999999999
Q ss_pred EEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeee-
Q psy14896 643 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN- 721 (813)
Q Consensus 643 a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~- 721 (813)
|.|..|.... .+.|.|..+|..... .+......+.+|+.+.|.|.+.|.|.|.++|+|+|..+..+.++..
T Consensus 82 ~~n~~~~~~~---~~~l~v~~~p~~~~~-----~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~ 153 (197)
T 3lcy_A 82 ATNEVGEVET---SSKLLLQATPQFHPG-----YPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIE 153 (197)
T ss_dssp EECSSCEEEE---EEEEEEEEEEEECTT-----SCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEE
T ss_pred EECCCCceeE---EEEEEEEcCCCCCCC-----ccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEE
Confidence 9998875433 366777766644321 1112224568899999999999999999999999999977654432
Q ss_pred ---cceEEEECCCCC-CCCEEEEEEEEcCCCceEEEEEEEEEcC
Q psy14896 722 ---FNRILTIPNVKV-EDQGEYICRASNDRSALESSVTISIQAE 761 (813)
Q Consensus 722 ---~~~~L~i~~v~~-~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 761 (813)
....|.|.++.. +|+|.|+|.|.|..|..+.++.|.|.++
T Consensus 154 ~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~k 197 (197)
T 3lcy_A 154 NTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQDK 197 (197)
T ss_dssp ECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEECC
T ss_pred EcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEecC
Confidence 226899999995 8999999999999999999999999753
No 104
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.91 E-value=1e-24 Score=208.52 Aligned_cols=185 Identities=22% Similarity=0.297 Sum_probs=145.6
Q ss_pred eecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCc-cEEEEeecccCCeeEEEEEE
Q psy14896 566 GFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG-ALYFSALEQIDAGNYSCNVQ 644 (813)
Q Consensus 566 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~-~L~i~~~~~~d~G~Y~C~a~ 644 (813)
..+|.+........+.+|+.++|.|.+ .+.|.+.+.|+|++.++.. ...++.+..++ +|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~~P~i~~~~~~~~~~~G~~v~l~C~~-~~~p~~~i~W~~~~~~~~~-~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (192)
T 2iep_A 5 PKAPVITTPLETVDALVEEVATFMCAV-ESYPQPEISWTRNKILIKL-FDTRYSIRENGQLLTILSVEDSDDGIYCCTAN 82 (192)
T ss_dssp CEEEEESSCCCEEEEETTSCEEEECCE-EEESCCEEEEEETTEECCT-TCTTEEEEGGGTEEEESSCCGGGCEEEEEEEE
T ss_pred CCCceeecCccceeeeCCCcEEEEeeC-CCCCCCeEEEEECCEEccc-cCccEEEcCCccEEEEcCCCcccCeEEEEEEE
Confidence 345556555666678899999999999 6889999999999976432 34566666555 59999999999999999999
Q ss_pred eeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceee-ecc
Q psy14896 645 SKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE-NFN 723 (813)
Q Consensus 645 n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~-~~~ 723 (813)
|..|.... ..+.|.|..+|.+... .....+.+|+.++|.|.+.|.|.|.++|+|+|..+..+.++. ...
T Consensus 83 ~~~~~~~~--~~~~l~v~~~p~~~~~--------~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~ 152 (192)
T 2iep_A 83 NGVGGAVE--SCGALQVKMKPKITRP--------PINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLES 152 (192)
T ss_dssp CSSSCCEE--EEEEEEEEEEEEEEEC--------CCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTT
T ss_pred cCCCceeE--eEEEEEEEeCCccccC--------CcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecC
Confidence 98875322 2456777776654431 123567899999999999999999999999999987765442 345
Q ss_pred eEEEECCCCCCCCEEEEEEEEcCCCce-EEEEEEEEEcCC
Q psy14896 724 RILTIPNVKVEDQGEYICRASNDRSAL-ESSVTISIQAEP 762 (813)
Q Consensus 724 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~-~~~~~l~V~~~P 762 (813)
+.|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..||
T Consensus 153 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 153 GSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp SCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred CcEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 689999999999999999999999987 557999999876
No 105
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.91 E-value=1.9e-24 Score=225.25 Aligned_cols=216 Identities=17% Similarity=0.225 Sum_probs=129.3
Q ss_pred ccEEEEeeeccC-C-CCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccCCeeEEEEeecCceeeEeee
Q psy14896 210 NDITLSCYAGGY-P-NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISES 287 (813)
Q Consensus 210 ~~v~l~C~~~g~-P-~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~ 287 (813)
++++|.|.+.|. | .+.|+|+|||..+............+..+.. ...|.|... +.+|+|.|+|+|.|..+.. ...
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~-~s~l~i~~~-~~~d~g~Y~C~a~n~~~~~-~~~ 101 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELAST-QSELTLSQK-HWLSDRTYTCQVTYQGHTF-EDS 101 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEE-EEEEEEEHH-HHHTTCCEEEEEEETTEEE-EEE
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEE-EEEEEEcHH-HcCCCCcEEEEEEeCCCCc-cee
Confidence 579999999885 4 4799999999877432110000000112211 123555543 5679999999999988764 333
Q ss_pred eEEeee---eeccccc-CCCCceeecCCCeEEEecCCCCCCcc---eEEEeeccccccccCCccEEE-c------cCccE
Q psy14896 288 VQLAFG---FIGEFNL-KRAPEIGNQNWGKAMFCDPPTNYPGV---NYYWARDYFPNFVEEDKRVFV-S------YDGAL 353 (813)
Q Consensus 288 ~~l~v~---~~~~~~~-~~~~~~~~~~~~~~l~C~~~~~~p~~---~v~W~k~~~~~~~~~~~~~~~-~------~~~~L 353 (813)
+.+.+. ..+.+.+ .+....+.+|+.++|.|.+.+..|.+ .|+|+|++... +........ . ..+.|
T Consensus 102 ~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~-~~~~~~~~~~~~~g~~~~~~~L 180 (323)
T 2wqr_A 102 TKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKP-VNHSTRKEEKQRNGTLTVTSTL 180 (323)
T ss_dssp ECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCC-CCCCCCEEEECTTSCEEEEEEE
T ss_pred eecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcc-cccccCCCccCCCCCEEEEEEE
Confidence 332111 1122222 22333567899999999975555666 99999975332 211111111 1 23369
Q ss_pred EEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEcc------CCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeec-
Q psy14896 354 YFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP------HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY- 426 (813)
Q Consensus 354 ~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~------~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~- 426 (813)
.|.++..+|+|.|+|.|.|..+.. ...+.|.. +|.+. +..+. ....+|+.++|.|.+.|.
T Consensus 181 ~I~~~~~~D~G~Y~C~a~n~~~~~-----~~~~~v~~~~~~~~~P~v~-~~~~~-------~~~~~g~~~~l~C~~~g~~ 247 (323)
T 2wqr_A 181 PVGTRDWIEGETYQCRVTHPHLPR-----ALMRSTTKTSGPRAAPEVY-AFATP-------EWPGSRDKRTLACLIQNFM 247 (323)
T ss_dssp ECCHHHHHTTCCEEEEEECTTSSS-----CEEEEECCCCSCCBCCEEE-EEECC-------CCTTCTTEEEEEEEEEEEB
T ss_pred EECHHHccCCCCEEEEEECCCCCC-----CeeeEEEccCCCCCCCEEE-EeCCC-------hHHhcCCcEEEEEEeeeee
Confidence 999999999999999999876321 23444432 12111 11111 122339999999999884
Q ss_pred CCC-eeeEeecCCcCCC
Q psy14896 427 PVP-SYNWTRRGSPLPR 442 (813)
Q Consensus 427 p~p-~i~W~~~~~~l~~ 442 (813)
|.+ .|.|+|+|.+|..
T Consensus 248 p~~~~v~W~k~g~~l~~ 264 (323)
T 2wqr_A 248 PEDISVQWLHNEVQLPD 264 (323)
T ss_dssp SSCCEEEEEETTEECCG
T ss_pred CCCcEEEEEECCEECCC
Confidence 443 7999998887754
No 106
>1qdd_A Lithostathine; pancreatic stone inhibitor, metal binding protein; HET: SIA NDG GAL; 1.30A {Homo sapiens} SCOP: d.169.1.1 PDB: 1lit_A
Probab=99.91 E-value=4.9e-24 Score=192.33 Aligned_cols=132 Identities=18% Similarity=0.298 Sum_probs=114.2
Q ss_pred ccCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccC-CCeEeeeCCHhHHHHHHHHhhhcC-CCCceEEEEeccCCCCC
Q psy14896 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL-DSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQSPNL 102 (813)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~-~~~L~~i~~~~e~~~i~~~~~~~~-~~~~~w~g~~~~~~~~~ 102 (813)
....||.||..|+++||+|+.. .++|.+|+..|+.+ ||+||+|+|++|++||.+++.... ....+||||.+...++.
T Consensus 10 ~~~~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~~gg~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~~~~~ 88 (144)
T 1qdd_A 10 ARISCPEGTNAYRSYCYYFNED-RETWVDADLYCQNMNSGNLVSVLTQAEGAFVASLIKESGTDDFNVWIGLHDPKKNRA 88 (144)
T ss_dssp GGTSCCTTCEEETTEEEEEEEE-EECHHHHHHHHHHTTSCEECCCCSHHHHHHHHHHHHHTTCCCSEEEEEEECTTSSSC
T ss_pred CCCCCCCCceecCCEeEEEeCC-CcCHHHHHHHhhccCCceECccCCHHHHHHHHHHHHhcCCCCCCEEEeeEcCCCCCe
Confidence 3457999999999999999998 49999999999998 899999999999999999986542 34589999999888899
Q ss_pred eEEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 103 WVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 103 ~~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|.|+||++++| .+|..++|++...++|+.|....+ ...|.+..|.....|+|+..
T Consensus 89 ~~W~dg~~~~~-~~W~~~~P~~~~~~~Cv~~~~~~~--~~~W~d~~C~~~~~fICe~~ 143 (144)
T 1qdd_A 89 WHWSSGSLVSY-KSWGIGAPSSVNPGYCVSLTSSTG--FQKWKDVPCEDKFSFVCKFK 143 (144)
T ss_dssp CEETTCCCCCC-CCBCTTCSCSSSCCSEEEEEGGGT--TCSEEEECTTSCEEEEEEEE
T ss_pred EEeCCCCCcCc-CccCCCCcCCCCCCCcEEEEecCC--CCeEeCCCCCCCceeeeeec
Confidence 99999999987 677777998766789999976543 24566999999999999974
No 107
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.91 E-value=3.5e-24 Score=208.36 Aligned_cols=192 Identities=19% Similarity=0.283 Sum_probs=144.8
Q ss_pred ecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEe--eCc--cEEEEeecc-cCCeeEEE
Q psy14896 567 FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS--YDG--ALYFSALEQ-IDAGNYSC 641 (813)
Q Consensus 567 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~--~~~--~L~i~~~~~-~d~G~Y~C 641 (813)
.+|.+...+....+.+|+.++|.|.+ .+.|.+.|+|+|++.++. ....++.+. .++ +|.|.+++. +|+|.|+|
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~-~g~p~~~v~W~~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 82 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAA-RGDPPPSIVWRKNGKKVS-GTQSRYTVLEQPGGISILRIEPVRAGRDDAPYEC 82 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEE-ECSSCCEEEEEETTEECC-TTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEE-ccCCCCeEEEEECCEECC-CCcceeEEEEcCCCeEEEEEEecCCCCcCceEEE
Confidence 35666666677788999999999999 788999999999997643 233444443 233 699999999 99999999
Q ss_pred EEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCC-ceee
Q psy14896 642 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFE 720 (813)
Q Consensus 642 ~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~-~~~~ 720 (813)
.|.|..|.. ....+.|.|...+.... ..|..........+.+|+.++|.|.+.|.|.|.|+|+|+|..+... .++.
T Consensus 83 ~~~n~~g~~--~~~~~~l~V~~~~~~~~-~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~ 159 (212)
T 2yd1_A 83 VAENGVGDA--VSADATLTIYEGDKTPA-GFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYS 159 (212)
T ss_dssp EEECSSSCE--EEEEEEEEEECTTCSCT-TCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEE
T ss_pred EEEeCCCCe--EEeeEEEEEecccCCCC-CCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEE
Confidence 999988752 23346788876543211 0011111222356788999999999999999999999999998753 3444
Q ss_pred ecceEEEECCCCCCCCEEEEEEEEcCCCceEEE-EEEEEEcCCc
Q psy14896 721 NFNRILTIPNVKVEDQGEYICRASNDRSALESS-VTISIQAEPN 763 (813)
Q Consensus 721 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~-~~l~V~~~P~ 763 (813)
..++.|.|.+++.+|+|.|+|.|.|..|...+. +.|.|+.++.
T Consensus 160 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~ 203 (212)
T 2yd1_A 160 LKDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRRV 203 (212)
T ss_dssp EETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred ccCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEeccc
Confidence 456799999999999999999999999998765 8999997654
No 108
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.91 E-value=2.7e-24 Score=206.01 Aligned_cols=184 Identities=19% Similarity=0.201 Sum_probs=140.8
Q ss_pred ecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEe-eC--ccEEEEeecccCCeeEEEEE
Q psy14896 567 FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS-YD--GALYFSALEQIDAGNYSCNV 643 (813)
Q Consensus 567 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~-~~--~~L~i~~~~~~d~G~Y~C~a 643 (813)
.+|.+...+....+.+|+.++|.|.+ .+.|.+.+.|+|+|.++......++.+. .+ .+|.|.+++.+|+|.|+|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHI-SGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKA 82 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEE-EEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEE-EecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEE
Confidence 35556666667788999999999999 7889999999999987544332233222 23 36999999999999999999
Q ss_pred EeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeee--
Q psy14896 644 QSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN-- 721 (813)
Q Consensus 644 ~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~-- 721 (813)
.|..|.... .+.|.|...+....+.. ......+.+|+.++|.|.+.|.|.|.++|+|+|..+..+.++..
T Consensus 83 ~n~~~~~~~---~~~l~v~~~~~~p~~~~-----~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~ 154 (194)
T 2a38_A 83 TNGSGQATS---TAELLVKAETAPPNFVQ-----RLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQ 154 (194)
T ss_dssp EETTEEEEE---EEEEEEECCCEEEEEEE-----CCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEE
T ss_pred EcCCceEeE---EEEEEEccCCCCCEEEe-----CCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEE
Confidence 998875433 35677763222111111 12235688999999999999999999999999999976654422
Q ss_pred --cceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEE
Q psy14896 722 --FNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 759 (813)
Q Consensus 722 --~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 759 (813)
...+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 155 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 155 EGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp ETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 22379999999999999999999999999999999884
No 109
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.91 E-value=1.2e-23 Score=201.13 Aligned_cols=186 Identities=20% Similarity=0.362 Sum_probs=151.0
Q ss_pred CCCCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEee--CCeEEEcCC
Q psy14896 186 IPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIINDP 263 (813)
Q Consensus 186 ~~~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~--~~~l~i~~~ 263 (813)
+..+|.|+..|.+..+.+| ++++|.|.+.|.|.+.+.|+|+|..+. ....++.+. +.+|.|.+.
T Consensus 4 ~~~~P~i~~~~~~~~~~~G-----~~v~l~C~~~~~p~~~i~W~~~~~~~~---------~~~~~~~~~~~~~~L~i~~~ 69 (192)
T 2iep_A 4 LPKAPVITTPLETVDALVE-----EVATFMCAVESYPQPEISWTRNKILIK---------LFDTRYSIRENGQLLTILSV 69 (192)
T ss_dssp CCEEEEESSCCCEEEEETT-----SCEEEECCEEEESCCEEEEEETTEECC---------TTCTTEEEEGGGTEEEESSC
T ss_pred cCCCceeecCccceeeeCC-----CcEEEEeeCCCCCCCeEEEEECCEEcc---------ccCccEEEcCCccEEEEcCC
Confidence 3456888888888888777 669999999999999999999997652 223344443 345777775
Q ss_pred ccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCc
Q psy14896 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343 (813)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~ 343 (813)
+.+|+|.|+|.|.|..|...+..+.|.|..+|.+........+..|+.++|.|.+ .|.|.+.+.|++++.. +....
T Consensus 70 -~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~--~~~~~ 145 (192)
T 2iep_A 70 -EDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTT-MGNPKPSVSWIKGDSA--LRENS 145 (192)
T ss_dssp -CGGGCEEEEEEEECSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEE-EEESCCEEEEEETTEE--CCCCS
T ss_pred -CcccCeEEEEEEEcCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEE-eccCCceEEEEeCCEE--ccCCC
Confidence 8999999999999998886577788898888887777777788899999999995 7789999999999987 44556
Q ss_pred cEEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccC
Q psy14896 344 RVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPH 391 (813)
Q Consensus 344 ~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~ 391 (813)
++.+..+++|.|.++..+|+|.|+|.|.|..|.. .+..+.|.|..+
T Consensus 146 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~--~s~~~~l~V~~p 191 (192)
T 2iep_A 146 RIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTA--YSKLVKLEVEVF 191 (192)
T ss_dssp SEEECTTSCEEESSCCGGGCEEEEEEEEETTEEE--ECCCEEEEEEC-
T ss_pred cEEEecCCcEEEecCChhhCEEEEEEEEcCCCcE--EEEEEEEEEEeC
Confidence 7778888899999999999999999999998754 233477777654
No 110
>1gz2_A Ovocleidin-17, OC-17 ovocleidin; structural protein, CTLD, eggshell structural protein, phosphoprotein, sugar-binding protein, glycoprotein; HET: SEP; 1.5A {Gallus gallus} SCOP: d.169.1.1
Probab=99.90 E-value=4e-24 Score=192.56 Aligned_cols=130 Identities=20% Similarity=0.221 Sum_probs=111.9
Q ss_pred cCCCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCC--------CCceEEEEe
Q psy14896 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP--------QRRKWYFGG 95 (813)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~--------~~~~w~g~~ 95 (813)
+..||.||..|+++||+|+... ++|.+|+..|+. +||+||+|+|++|++||.+++..... ...+||||.
T Consensus 2 ~~~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~~~~~~~WIGl~ 80 (142)
T 1gz2_A 2 PDGCGPGWVPTPGGCLGFFSRE-LSWSRAESFCRRWGPGSHLAAVRSAAELRLLAELLNASRGGDGSGEGADGRVWIGLH 80 (142)
T ss_dssp --CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTCTTEEECCCCSHHHHHHHHHHHHCSSCCSSSCCCCSSCEEEEEE
T ss_pred CCCCCcccEEcCCEEEEEcCCC-cCHHHHHHHHhccCCCceECccCCHHHHHHHHHHHHhcccccccccccCCCEEEEee
Confidence 3569999999999999999985 999999999999 99999999999999999999865432 568999999
Q ss_pred ccCCCCCeEEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 96 TQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 96 ~~~~~~~~~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
+...++.|.|+||++++| .+|..++|++. .++|+.|....+ ...|.+..|.....|+|++.
T Consensus 81 ~~~~~~~w~W~dg~~~~~-~~W~~~~P~~~-~~~C~~~~~~~~--~~~w~~~~C~~~~~fICe~~ 141 (142)
T 1gz2_A 81 RPAGSRSWRWSDGTAPRF-ASWHRTAKARR-GGRCAALRDEEA--FTSWAARPCTERNAFVCKAA 141 (142)
T ss_dssp CCTTCSSCEETTSCCCCC-CCBCSSSGGGC-SCSEEEECTTTT--SSCEEEECTTCCEEEEEEEE
T ss_pred cCCCCCCcEeCCCCccCc-cCcCCCCCCCC-CCCCeEEecCCC--CCeEecCCCCCCceeEEeec
Confidence 988889999999999987 67777788765 789999966543 23566999999999999974
No 111
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.90 E-value=8.6e-24 Score=202.63 Aligned_cols=178 Identities=19% Similarity=0.239 Sum_probs=140.4
Q ss_pred cccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEE--ee--------CccEEEEeecccCCe
Q psy14896 568 IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFV--SY--------DGALYFSALEQIDAG 637 (813)
Q Consensus 568 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~--~~--------~~~L~i~~~~~~d~G 637 (813)
+|.|...+....+.+|+.++|.|.+..+.|.+.|.|+|+|.++......++.+ .. .++|.|.+++.+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 35566667778889999999999993288999999999998644332223333 23 357999999999999
Q ss_pred eEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCC-eEEEEeCCcccCCC
Q psy14896 638 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP-SYNWTRRGSPLPRN 716 (813)
Q Consensus 638 ~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p-~i~W~k~g~~l~~~ 716 (813)
.|+|.|.|..|... ...+.|.|..+|.+.. .+....+.+|+.++|.|.+.|.|.| .|+|+|+|..+...
T Consensus 82 ~Y~C~~~~~~~~~~--~~~~~l~V~~~p~~~~--------~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~ 151 (195)
T 2c5d_C 82 QYQCLVFLGHQTFV--SQPGYVGLEGLPYFLE--------EPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATA 151 (195)
T ss_dssp EEEEEEEETTEEEE--CCCEEEEECCSCEEEE--------CCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSS
T ss_pred EEEEEEEeCCCcee--cccEEEEEecCCeEEc--------CCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCC
Confidence 99999999776432 3347788888875533 1122567899999999999999999 99999999998766
Q ss_pred ceeeecceEEEECCCCCCCCEEEEEEEEcCCCceE-EEEEEEE
Q psy14896 717 AYFENFNRILTIPNVKVEDQGEYICRASNDRSALE-SSVTISI 758 (813)
Q Consensus 717 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~-~~~~l~V 758 (813)
... ....+|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 152 ~~~-~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 152 PGH-GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp TTS-SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCc-CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 543 456789999987 89999999999999986 7999999
No 112
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.90 E-value=6.3e-24 Score=206.51 Aligned_cols=192 Identities=17% Similarity=0.245 Sum_probs=138.4
Q ss_pred eecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEE-ee---CccEEEEee-cccCCeeEE
Q psy14896 566 GFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFV-SY---DGALYFSAL-EQIDAGNYS 640 (813)
Q Consensus 566 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~-~~---~~~L~i~~~-~~~d~G~Y~ 640 (813)
..+|.+...+....+.+|+.++|.|.+ .|.|.+.|.|+|++.++. ....... .. ...|.|.++ +.+|+|.|+
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~-~g~p~~~v~W~k~~~~~~--~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~ 80 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQA-TGDPRPKIVWNKKGKKVS--NQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYE 80 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEE-EEESCCEEEEEETTEECC--CTTEEEEEEGGGTEEEEEECSCCTTTTCEEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEE-eeCCCCEEEEEECCcCCC--CCceeEEEEcCCCceEEEEeccCCCCCCeEEE
Confidence 356666666777788999999999999 688999999999997643 2222222 11 235999999 599999999
Q ss_pred EEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCc---
Q psy14896 641 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA--- 717 (813)
Q Consensus 641 C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~--- 717 (813)
|.|.|..|... ..+.|.|...+.... ..|.....+....+.+|+.++|.|.+.|.|.|.|+|+|+|..+....
T Consensus 81 C~a~n~~g~~~---~~~~l~V~~~~~~~~-~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~ 156 (212)
T 2yd6_A 81 CVASNNVGEIS---VSTRLTVLREDQIPR-GFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNG 156 (212)
T ss_dssp EEEEETTEEEE---EEEEEEEECGGGCCT-TCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------C
T ss_pred EEEEcCCCcEE---EEEEEEEeccCccCC-CcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCc
Confidence 99999887633 346777776532210 00111111223467889999999999999999999999999887542
Q ss_pred eee----ecceEEEECCCCCCCCEEEEEEEEcCCCceE-EEEEEEEEcCCcc
Q psy14896 718 YFE----NFNRILTIPNVKVEDQGEYICRASNDRSALE-SSVTISIQAEPNF 764 (813)
Q Consensus 718 ~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~-~~~~l~V~~~P~~ 764 (813)
++. ...+.|.|.+++.+|+|.|+|.|.|.+|... ..+.|.|..+|.+
T Consensus 157 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~~~ 208 (212)
T 2yd6_A 157 RIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTKHH 208 (212)
T ss_dssp CEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC----
T ss_pred eEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEecccc
Confidence 221 2247899999999999999999999999864 5789999888765
No 113
>1uv0_A Pancreatitis-associated protein 1; lectin, C-type, secreted, inflammatory response, acute phase; 1.78A {Homo sapiens} SCOP: d.169.1.1 PDB: 2go0_A
Probab=99.90 E-value=1.2e-23 Score=191.09 Aligned_cols=132 Identities=18% Similarity=0.220 Sum_probs=113.1
Q ss_pred ccCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccC-CCeEeeeCCHhHHHHHHHHhhhcC-CCCceEEEEeccCCCCC
Q psy14896 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL-DSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQSPNL 102 (813)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~-~~~L~~i~~~~e~~~i~~~~~~~~-~~~~~w~g~~~~~~~~~ 102 (813)
....||.||..|+++||+|+.. .++|.+|+..|+.+ ||+||+|+|++|++||..++.... ....+||||.+...++.
T Consensus 10 ~~~~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WiGl~~~~~~~~ 88 (149)
T 1uv0_A 10 ARIRCPKGSKAYGSHCYALFLS-PKSWTDADLACQKRPSGNLVSVLSGAEGSFVSSLVKSIGNSYSYVWIGLHDPTQGTE 88 (149)
T ss_dssp CCCCCCTTCEEETTEEEEEEEE-EECHHHHHHHHTTSTTCEECCCCSHHHHHHHHHHHTTSCTTCCEEEEEEECTTTTCC
T ss_pred CCCCCCccccccCCEEEEEECC-CCCHHHHHHHhhcCCCccEeEeCCHHHHHHHHHHHHhhccCCCCEEEeeEccCCCCc
Confidence 3457999999999999999998 49999999999998 899999999999999999985432 24579999999887776
Q ss_pred -----eEEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 103 -----WVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 103 -----~~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|.|.||++++| .+|..++|++...++|+.|....+ ...|.+..|.....|+|+..
T Consensus 89 ~~~~~w~W~dg~~~~~-~~W~~~~P~~~~~~~Cv~~~~~~~--~~~W~d~~C~~~~~fICe~~ 148 (149)
T 1uv0_A 89 PNGEGWEWSSSDVMNY-FAWERNPSTISSPGHCASLSRSTA--FLRWKDYNCNVRLPYVCKFT 148 (149)
T ss_dssp --CCCCEETTCCCCCC-CCBSSCGGGSSSCCSEEEEEGGGT--TCSEEEECTTSCEEEEEEEC
T ss_pred cCCCccEECCCCccCc-cCcCCCCcCCCCCCCCEEEEcCCC--CCeEeCcCCCCCCceEEeec
Confidence 99999999987 677777898766789999977643 24566999999999999974
No 114
>2kv3_A Regenerating islet-derived protein 4; GISP, C-type lectin, REG IV, disulfide bond, glycoPro lectin, secreted, sugar binding protein; NMR {Homo sapiens}
Probab=99.90 E-value=4.9e-24 Score=188.91 Aligned_cols=127 Identities=17% Similarity=0.245 Sum_probs=110.0
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHcccC--CCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEE
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~--~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W 105 (813)
.||.||..|+++||+|+... ++|.+|+..|+.+ ||+||+|++++|++||.+++........+||||.+...++.|.|
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W 80 (131)
T 2kv3_A 2 SCAPGWFYHKSNCYGYFRKL-RNWSDAELECQSYGNGAHLASILSLKEASTIAEYISGYQRSQSIWIGLHDPQKRQQWQW 80 (131)
T ss_dssp CSCTTCCEETTEEEEEEEEE-ECHHHHHHHHHTTSSSCEECCCSSHHHHHHHHHHHTCTTSCCCCBCSEECSSSSSCCEE
T ss_pred cCCcccEEcCCEeEEEECCC-CCHHHHHHHHhccCCCceEeeeCCHHHHHHHHHHHHhcCCCCCEEEeccCCCCCCCeEe
Confidence 59999999999999999984 9999999999999 99999999999999999998543224689999999888899999
Q ss_pred cCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 106 ~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
+||++++| .+|..++| ...++|+.|....+ .+.|.+..|.....|+|+..
T Consensus 81 ~dg~~~~~-~~W~~~~P--~~~~~C~~~~~~~~--~~~W~~~~C~~~~~~iCe~~ 130 (131)
T 2kv3_A 81 IDGAMYLY-RSWSGKSM--GGNKHCAEMSSNNN--FLTWSSNECNKRQHFLCKYR 130 (131)
T ss_dssp TTCCCCSS-CCCSSCCC--TTCTTEEEECTTCT--TCCEEEECTTCCEEEEEEEC
T ss_pred CCcCcccc-cccCCCCC--CCCCCceEEECCCC--cCceecCCCCCCceEEEeeC
Confidence 99999987 67777788 45789999966543 23566999999999999974
No 115
>1tdq_B Aggrecan core protein; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: d.169.1.1
Probab=99.90 E-value=9e-24 Score=186.80 Aligned_cols=124 Identities=19% Similarity=0.369 Sum_probs=108.0
Q ss_pred cCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEE
Q psy14896 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (813)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W 105 (813)
...||.||..|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||.+++ ...+||||.+...++.|.|
T Consensus 4 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~-----~~~~WIGl~~~~~~~~~~W 77 (130)
T 1tdq_B 4 QEQCEEGWTKFQGHCYRHFPDR-ETWVDAERRCREQQSHLSSIVTPEEQEFVNKNA-----QDYQWIGLNDRTIEGDFRW 77 (130)
T ss_dssp -CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHH-----CSCEEEEEECSSSTTCCEE
T ss_pred ccCCCcccEEeCCEEEEEECCC-CCHHHHHHHHHhcCCEEeeeCCHHHHHHHHhcc-----CCCEEEeeecCCCCCEEEe
Confidence 4569999999999999999984 999999999999999999999999999999986 2578999999888899999
Q ss_pred cCCCCCCccccccCCCCCCc--ccCCeEEEEeeccccccceeeccCCCceeeeeee
Q psy14896 106 EDGTNLNELDAAFLPEPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (813)
Q Consensus 106 ~dgs~~~~~~~~~~~~p~~~--~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~ 159 (813)
.||+++.| .+|..++|++. ..++|+.|..... ..|.+..|.....|+|++
T Consensus 78 ~dg~~~~~-~~W~~~~P~~~~~~~~~C~~~~~~~~---~~w~~~~C~~~~~fICe~ 129 (130)
T 1tdq_B 78 SDGHSLQF-EKWRPNQPDNFFATGEDCVVMIWHER---GEWNDVPCNYQLPFTCKK 129 (130)
T ss_dssp TTCCCCCC-CCBCTTCCCCCSTTTEEEEEEETTTT---TEEEEEETTSCEEEEEEE
T ss_pred cCCCcCCc-cccCCCCCCCccCCCCCeEEEccCCC---CcccCcCCCCCeeeeeec
Confidence 99999997 67777799874 4689999975322 345599999999999987
No 116
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.90 E-value=2.3e-23 Score=200.81 Aligned_cols=185 Identities=32% Similarity=0.563 Sum_probs=141.6
Q ss_pred CCCceeccCCCceEEeCCCCCCCc-cEEEEccCCCCCcccCCCe-EEEeeCccEEEEeecccCCeeEEEEEEeeecCccc
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKR-VFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGR 652 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~-~~v~W~k~~~~~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 652 (813)
.....+.+|+.++|.|.+..+.|. +.++|+|++.++......+ .....+++|.|.+++.+|+|.|+|.|.|..+....
T Consensus 15 ~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 94 (201)
T 3s97_C 15 RPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 94 (201)
T ss_dssp CCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEE
T ss_pred CceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcch
Confidence 455678899999999993378898 9999999998765444444 44446778999999999999999999998765544
Q ss_pred cCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeeecceEEEECCCC
Q psy14896 653 NGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVK 732 (813)
Q Consensus 653 ~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~ 732 (813)
....+.+.+......... .|..........+.+|+.++|.|.+.|.|.|.|+|+|++..+.....+......|.|.++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~L~i~~v~ 173 (201)
T 3s97_C 95 FSKFIPLIPIPERTTKPY-PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQ 173 (201)
T ss_dssp ECCCEEEEEECCSSCCCE-EEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTEEEECSCC
T ss_pred hhcccceeeccccccCCC-CCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCEEEEccCC
Confidence 333444444322111000 0000001113567899999999999999999999999999988776666667899999999
Q ss_pred CCCCEEEEEEEEcCCCceEEEEEEEEEc
Q psy14896 733 VEDQGEYICRASNDRSALESSVTISIQA 760 (813)
Q Consensus 733 ~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 760 (813)
.+|+|.|+|.|.|..|..+.++.|.|++
T Consensus 174 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~a 201 (201)
T 3s97_C 174 LEDEGIYECEAENIRGKDKHQARIYVQA 201 (201)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred hhhCEEEEEEEEecCCceeeeEEEEEeC
Confidence 9999999999999999999999999873
No 117
>2c6u_A CLEC1B protein; lectin, rhodocytin, aggretin, C-type lectin-like, platelets, thrombosis; 1.6A {Homo sapiens}
Probab=99.90 E-value=5e-24 Score=185.58 Aligned_cols=119 Identities=20% Similarity=0.396 Sum_probs=105.9
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcC
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~d 107 (813)
.||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||.+++. ..+||||.+...++.|.|.|
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~-----~~~WiGl~~~~~~~~~~W~d 75 (122)
T 2c6u_A 2 PCDTNWRYYGDSCYGFFRHN-LTWEESKQYCTDMNATLLKIDNRNIVEYIKARTH-----LIRWVGLSRQKSNEVWKWED 75 (122)
T ss_dssp CSCTTEEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHTTCC-----SCEEEEEECSSTTSCCBCTT
T ss_pred CCCccceEeCCEEEEEECCc-CCHHHHHHHHHhCCCeEeeECCHHHHHHHHHhhc-----CCEEEEeeecCCCCCeEeCC
Confidence 59999999999999999984 9999999999999999999999999999998863 36899999988899999999
Q ss_pred CCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 108 GTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 108 gs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|+++.| +|..++|++.+.++|+.|. . ..|.+..|.....|+|++.
T Consensus 76 g~~~~~--~W~~~~P~~~~~~~C~~~~--~----g~w~~~~C~~~~~~ICe~~ 120 (122)
T 2c6u_A 76 GSVISE--NMFEFLEDGKGNMNCAYFH--N----GKMHPTFCENKHYLMCERK 120 (122)
T ss_dssp SCBCCG--GGGGGBCCCCTTCCEEEEE--T----TEEEEECTTSCEEEEEEEE
T ss_pred CCccCc--CcccCCCCCCCCCCeeEEc--C----CeEEeccCCCCceEeeeec
Confidence 999987 7777799877678999993 2 2455999999999999984
No 118
>1tn3_A Tetranectin; plasminogen binding, kringle 4, C-type lectin, carbohydrate recognition domain; 2.00A {Homo sapiens} SCOP: d.169.1.1 PDB: 1rjh_A 3l9j_C
Probab=99.90 E-value=4.7e-24 Score=190.66 Aligned_cols=128 Identities=15% Similarity=0.182 Sum_probs=110.3
Q ss_pred CCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcC-CCCceEEEEeccCCCCCeEE
Q psy14896 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQSPNLWVN 105 (813)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~-~~~~~w~g~~~~~~~~~~~W 105 (813)
..||.||. |+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||.+++.... ....+||||.+...++.|.|
T Consensus 4 ~~Cp~gw~-~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~~~~~w~W 81 (137)
T 1tn3_A 4 TVCLKGTK-VHMKCFLAFTQT-KTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNEAEIWLGLNDMAAEGTWVD 81 (137)
T ss_dssp CEEEECSS-SSEEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHTCTTCEEEEEEEEEEETTEEEE
T ss_pred CCCCCCeE-ECCEEEEEeCCC-CCHHHHHHHHHhcCCEEcccCCHHHHHHHHHHHHhhcCCCCCEEEeeEccCCCceEEe
Confidence 46999999 999999999984 9999999999999999999999999999999885432 24689999999888899999
Q ss_pred cCCCCCCcccccc---CCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 106 EDGTNLNELDAAF---LPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 106 ~dgs~~~~~~~~~---~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.||++++| .+|. .++|++...++|+.|.... ...|.+..|.....|+|+..
T Consensus 82 ~dg~~~~~-~~W~~~~~g~P~~~~~~~Cv~~~~~~---~~~W~d~~C~~~~~fiCe~~ 135 (137)
T 1tn3_A 82 MTGARIAY-KNWETEITAQPDGGKTENCAVLSGAA---NGKWFDKRCRDQLPYICQFG 135 (137)
T ss_dssp TTSCBCSC-CCBCCTTTCSSCCGGGCCEEEEETTT---TTEEEEECTTSCEEEEEEEE
T ss_pred CCcCCCcc-cccCcCCCCcCCCCCccCCcEEccCC---CCeEeCcCCCCCccceEeEe
Confidence 99999987 6777 6799876678999996532 23455999999999999984
No 119
>2ox9_A Collectin placenta 1; C-type lectin, sugar binding protein; HET: GAL NAG FUC; 1.95A {Mus musculus} PDB: 2ox8_A
Probab=99.90 E-value=1.5e-23 Score=187.77 Aligned_cols=124 Identities=23% Similarity=0.400 Sum_probs=108.4
Q ss_pred CCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEc
Q psy14896 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (813)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~ 106 (813)
..||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||.+++. ....+||||.+...++.|.|.
T Consensus 3 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~---~~~~~WIGl~~~~~~~~~~W~ 78 (140)
T 2ox9_A 3 NGCPPHWKNFTDKCYYFSLEK-EIFEDAKLFCEDKSSHLVFINSREEQQWIKKHTV---GRESHWIGLTDSEQESEWKWL 78 (140)
T ss_dssp -CCCTTCEEETTEEEEECSCC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHTCC---SSSCEEEEEECSSSTTCCEET
T ss_pred CCCCcCceEcCCEEEEEECCC-cCHHHHHHHHHhcCCEEeeeCCHHHHHHHHHHhc---CCCCEEeeeEeCCCCCceEeC
Confidence 469999999999999999884 9999999999999999999999999999999873 246899999998888999999
Q ss_pred CCCCCCccccccCCCCCCc-----ccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 107 DGTNLNELDAAFLPEPADN-----VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 107 dgs~~~~~~~~~~~~p~~~-----~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
||+++.| .+|..++|++. ..++|+.|... ..|.+..|.....|+|++.
T Consensus 79 dg~~~~~-~~W~~~~P~~~~~~~~~~~~Cv~~~~~-----g~W~d~~C~~~~~fICe~~ 131 (140)
T 2ox9_A 79 DGSPVDY-KNWKAGQPDNWGSGHGPGEDCAGLIYA-----GQWNDFQCDEINNFICEKE 131 (140)
T ss_dssp TSCBCCS-CCBCTTCCCCTTTTTSSCCCEEEECGG-----GCEEEECTTSCBEEEEEEE
T ss_pred CcCcCCc-cCcCCcCCCCcccCCCCCCCCceECCC-----CeEeccCCCCCceeEEeec
Confidence 9999987 67777799873 47899998542 3455999999999999995
No 120
>1ypq_A Oxidised low density lipoprotein (lectin-like) receptor 1; oxidized low density lipoprotein receptor, LOX-1, CTLD, C- type lectin like domain; 1.40A {Homo sapiens} SCOP: d.169.1.1 PDB: 1ypu_A 1yxk_A 3vlg_A 1ypo_A 1yxj_A
Probab=99.90 E-value=1.1e-23 Score=187.49 Aligned_cols=127 Identities=18% Similarity=0.301 Sum_probs=108.8
Q ss_pred ccCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeE
Q psy14896 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (813)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~ 104 (813)
.+..||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||.+++.. ....+||||.+...++.|.
T Consensus 5 ~~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~--~~~~~WIGl~~~~~~~~w~ 81 (135)
T 1ypq_A 5 CSAPCPQDWIWHGENCYLFSSGS-FNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISY--SSFPFWMGLSRRNPSYPWL 81 (135)
T ss_dssp CCCSSCTTSEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHTT--CCCCEEEEEEESSTTSCCE
T ss_pred cCCcCCcccEEcCCEEEEEECCc-cCHHHHHHHHHhCCCEEeEeCCHHHHHHHHHHHhc--cCCCEEEeccccCCCCCeE
Confidence 45679999999999999999995 99999999999999999999999999999999853 2457999999998899999
Q ss_pred EcCCCCCCccccccCCCCCCc-ccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 105 NEDGTNLNELDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 105 W~dgs~~~~~~~~~~~~p~~~-~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|.||+++..+.+|..++|++. ..++|+.|.. + . |.+..|.....|+|++.
T Consensus 82 W~dg~~~~~~~~w~~g~P~~~~~~~~Cv~~~~--~--~--w~~~~C~~~~~fICe~~ 132 (135)
T 1ypq_A 82 WEDGSPLMPHLFRVRGAVSQTYPSGTCAYIQR--G--A--VYAENCILAAFSICQKK 132 (135)
T ss_dssp ETTSCBCCTTSCCEEESCSCCCTTCEEEEEET--T--E--EEEEETTSCBEEEEEEE
T ss_pred eCCcCccCcccccccCCCCCCCCCCCeeEEeC--C--c--EEccCCCCCeeeEeeec
Confidence 999999964356666688874 3688998853 2 3 45999999999999985
No 121
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.90 E-value=5.2e-23 Score=200.97 Aligned_cols=180 Identities=28% Similarity=0.521 Sum_probs=143.4
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEE----EcCC
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLI----INDP 263 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~----i~~~ 263 (813)
.+|.|+..|.+..+.+| +++.|.|.+.|.|.+.|.|+|+|..+... .....++...++.+. |.+
T Consensus 8 ~~P~i~~~p~~~~v~~G-----~~v~L~C~~~g~p~~~v~W~~~g~~~~~~------~~~~~~~~~~~~~~~~~l~i~~- 75 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKN-----EPATLNCKVEGKPEPTIEWFKDGEPVSTN------EKKSHRVQFKDGALFFYRTMQG- 75 (217)
T ss_dssp CCCEEEECCCCEEECTT-----SCEEECCEEECSSCCEEEEEETTEECCCS------SSSSSEEECTTSCEEESSCCBS-
T ss_pred CCCEEecCCCceEEeCC-----CcEEEEEEcCCCCCCeEEEEECCcCccCC------CccceeEEecCCceEEEEEecc-
Confidence 47999999999988887 67999999999999999999999876321 122334445566653 344
Q ss_pred ccccCCeeEEEEeecCceeeEeeeeEEeeeee-cccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccc---
Q psy14896 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFI-GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV--- 339 (813)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~-~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~--- 339 (813)
++.+|+|.|+|.|.|..|...+..+.|.|... +.+...+....+.+|+.++|.|.+..+.|.+.++|+|++.++..
T Consensus 76 v~~~d~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~ 155 (217)
T 2vr9_A 76 KKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKA 155 (217)
T ss_dssp SSCBCCEEEEEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCC
T ss_pred CCcccCceEEEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccc
Confidence 58999999999999999987677788888764 44555566777889999999999768899999999999987542
Q ss_pred ---cCCccEEEccCccEEEeeeeecCCeeeEEEEeeeccccCC
Q psy14896 340 ---EEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGR 379 (813)
Q Consensus 340 ---~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 379 (813)
....++....+++|.|.++..+|+|.|+|.|.|..|....
T Consensus 156 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~ 198 (217)
T 2vr9_A 156 MSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRES 198 (217)
T ss_dssp C---CCCSEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEEC
T ss_pred cccccCCcEEecCCCcEEEeeCCHHHCeEEEEEEEcccceecc
Confidence 2455666667789999999999999999999999986543
No 122
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.90 E-value=7.6e-24 Score=202.40 Aligned_cols=164 Identities=12% Similarity=0.053 Sum_probs=117.5
Q ss_pred ceeccCCCceEEeC---CCCCCCccEEEEccCCCCCccc---------------CCCeEEEee---CccEEEEeecccCC
Q psy14896 578 EIGNQNWGKAMFCD---PPTNYPGVNYYWARDYFPNFVE---------------EDKRVFVSY---DGALYFSALEQIDA 636 (813)
Q Consensus 578 ~~~~~g~~~~l~C~---~~~~~p~~~v~W~k~~~~~~~~---------------~~~~~~~~~---~~~L~i~~~~~~d~ 636 (813)
..+..|+.++|.|. + .+.|.+.|+|+|+|.+.... ...++.+.. ..+|.|.+++.+|+
T Consensus 3 Vta~~Ge~v~L~C~~~~v-~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRV-SLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CEEETTCCEEEEEECSST-TCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred eEEEcCCCEEEEeeeecc-CCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 45778999999994 5 68899999999988643110 011122221 23599999999999
Q ss_pred eeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCC-
Q psy14896 637 GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR- 715 (813)
Q Consensus 637 G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~- 715 (813)
|.|+|.|.|..|.... .+.|.|..+|.+.. .+....+.+|++++|.|.+.|.|.|.|+|++++..+..
T Consensus 82 G~Y~C~a~n~~g~~~~---~~~l~V~~p~~~~~--------~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~ 150 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTK---QEHLSVVKPLTLSV--------HSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAP 150 (203)
T ss_dssp EEEEEEEEETTEEEEE---EEEEEEEEEEEEEE--------EEEECCSSCSCCEEEEEEEEEESCCEEEECCC-------
T ss_pred eEEEEEEEcCCCcEEE---EEEEEecCCceeee--------cceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCc
Confidence 9999999998876533 47788887765432 12235688999999999999999999999987765432
Q ss_pred ---Cceee-ecc---eEEEECCCCCCCCEEEEEEEEcCCCceEEE
Q psy14896 716 ---NAYFE-NFN---RILTIPNVKVEDQGEYICRASNDRSALESS 753 (813)
Q Consensus 716 ---~~~~~-~~~---~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 753 (813)
+.++. ..+ ..|.|.++..+|+|.|+|+|.|.+|++...
T Consensus 151 ~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 151 TAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp -----CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred ccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 22221 223 345667999999999999999999988753
No 123
>1jwi_B Platelet aggregation inducer; domain swapping, C-type lectin, toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB: 1uex_B
Probab=99.90 E-value=1e-23 Score=184.70 Aligned_cols=121 Identities=21% Similarity=0.210 Sum_probs=104.6
Q ss_pred CCCchhhhccCCeEEEEecCCcCCHHHHHhHcc--cCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeE
Q psy14896 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK--SLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (813)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~--~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~ 104 (813)
..||.||..|+++||+|+... ++|.+|+..|+ .+||+||+|+|++|++||.+++........+||||.+...++.|.
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WiGl~~~~~~~~~~ 80 (125)
T 1jwi_B 2 EGCLPDWSSYKGHCYKVFKVE-KTWADAEKFCKELVNGGHLMSVNSREEGEFISKLALEKMRIVLVWIGLSHFWRICPLR 80 (125)
T ss_dssp -CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHTTCCCEEEEEEEECGGGSCEE
T ss_pred CCCCCCCEecCCEEEEEECCC-cCHHHHHHHhhccCCCceECccCCHHHHHHHHHHHHhcCCCCCEEEeeecCCCCCceE
Confidence 369999999999999999985 99999999999 899999999999999999999865444568999999988889999
Q ss_pred EcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 105 NEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 105 W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|.||++++| .+|..++| |+.|.... ..|.+..|.....|+|+..
T Consensus 81 W~dg~~~~~-~~W~~g~p-------C~~~~~~~----~~W~~~~C~~~~~~iCe~~ 124 (125)
T 1jwi_B 81 WTDGARLDY-RALSDEPI-------CFVAESFH----NKWIQWTCNRKKSFVCKYR 124 (125)
T ss_dssp ETTCCCCCS-CCSCCSCE-------EEEEETTT----CCEEEEETTSCEEEEEEEE
T ss_pred eeCcCcCcc-CCcCCCCC-------eEEEECCC----CeEecCCCCCCCcEEEeEe
Confidence 999999987 57655565 99987632 3455999999999999974
No 124
>1jzn_A Galactose-specific lectin; C-type lectin, protein-disaccharide complex, sugar binding P; HET: BGC GAL; 2.20A {Crotalus atrox} SCOP: d.169.1.1 PDB: 1muq_A*
Probab=99.90 E-value=1.6e-23 Score=186.71 Aligned_cols=129 Identities=16% Similarity=0.203 Sum_probs=111.1
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcC-CCCceEEEEeccCCCCCeE
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQSPNLWV 104 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~-~~~~~w~g~~~~~~~~~~~ 104 (813)
.||.||..|+++||+|+... ++|.+|+..|+. .||+||+|+|++|++||.+++.... ....+||||.+...++.|.
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~~~~~~~ 80 (135)
T 1jzn_A 2 NCPLDWLPMNGLCYKIFNQL-KTWEDAEMFCRKYKPGCHLASFHRYGESLEIAEYISDYHKGQENVWIGLRDKKKDFSWE 80 (135)
T ss_dssp CSCTTSEEETTEEEEEEEEE-ECHHHHHHHHHHHSSSEEECCCCSHHHHHHHHHHHHHHCCSSCCEEEEEECTTSSSCCE
T ss_pred cCCCCceeeCCEEEEEECCc-cCHHHHHHHHhccCCCCEECccCCHHHHHHHHHHHHhcccCCCCEEEeeEcCCcCCceE
Confidence 59999999999999999984 999999999999 6999999999999999999885432 2358999999988889999
Q ss_pred EcCCCCCCccccccCCCCCCcc-cCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 105 NEDGTNLNELDAAFLPEPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 105 W~dgs~~~~~~~~~~~~p~~~~-~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|+||++++| .+|..++|++.. .++|+.|....+ ...|.+..|.....|+|+..
T Consensus 81 W~dg~~~~~-~~W~~~~P~~~~~~~~C~~~~~~~~--~~~w~~~~C~~~~~~ICe~~ 134 (135)
T 1jzn_A 81 WTDRSCTDY-LTWDKNQPDHYQNKEFCVELVSLTG--YRLWNDQVCESKDAFLCQCK 134 (135)
T ss_dssp ETTCCCCCC-CCBCTTCCCCGGGCCCEEEECGGGT--TCSEEEECTTSCEEEEEEEC
T ss_pred ECCCCccCc-CcCCcCCCCCCCCCCCceEEECCCC--CCcCCCcCCCCCCceeeeec
Confidence 999999987 677777998753 689999976543 14566999999999999974
No 125
>2e3x_C Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=99.90 E-value=1.3e-23 Score=183.25 Aligned_cols=119 Identities=19% Similarity=0.269 Sum_probs=104.4
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEE
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W 105 (813)
.||.||..|+++||+++... ++|.+|+..|+. +||+||+|+|++|++||.+++........+||||.+...++.|.|
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W 80 (122)
T 2e3x_C 2 DCPSGWLSYEQHCYKGFNDL-KNWTDAEKFCTEQKKGSHLVSLHSREEEKFVVNLISENLEYPATWIGLGNMWKDCRMEW 80 (122)
T ss_dssp CCCSSCEEETTEEEEECCCC-BCHHHHHHHHHHHSTTCCBCCCSSHHHHHHHHHHHHHHCSSSEEEEEEESTTSSSCEEE
T ss_pred CCCcchhhhCCEeEEEECCC-cCHHHHHHHHhccCCCCEECccCCHHHHHHHHHHHHhcCCCCCEEEeeeecCCCCceEe
Confidence 69999999999999999985 999999999999 899999999999999999998654334689999999888899999
Q ss_pred cCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeee
Q psy14896 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (813)
Q Consensus 106 ~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~ 159 (813)
.||+++.| .+|. ++| +|+.|....+ .|.+..|.....|+|++
T Consensus 81 ~dg~~~~~-~~W~-~~P------~C~~~~~~~g----~w~~~~C~~~~~~ICe~ 122 (122)
T 2e3x_C 81 SDRGNVKY-KALA-EES------YCLIMITHEK----VWKSMTCNFIAPVVCKF 122 (122)
T ss_dssp TTSCCCCC-CCBC-SCC------EEEEEETTTC----CEEEEETTSCBCCEEC-
T ss_pred CCCCcccc-cccC-CCC------CCEEEECCCC----cEeCCCCCCCCceeecC
Confidence 99999987 6777 777 8999876543 45599999999999974
No 126
>3rs1_A C-type lectin domain family 2 member I; C-type lectin-like, ligand of NK receptor, natural killer CE receptors, surface of activated T lymphocytes; 1.94A {Mus musculus}
Probab=99.90 E-value=2.4e-23 Score=181.30 Aligned_cols=118 Identities=18% Similarity=0.300 Sum_probs=102.3
Q ss_pred ccCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeE
Q psy14896 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (813)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~ 104 (813)
....||.||..|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||.+++ ....+||||.+...++.|.
T Consensus 4 ~~~~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~----~~~~~WIGl~~~~~~~~w~ 78 (122)
T 3rs1_A 4 TYAACSKNWTGVGNKCFYFSGYP-RNWTFAQAFCMAQEAQLARFDNEEELIFLKRFK----GDFDSWIGLHRESSEHPWK 78 (122)
T ss_dssp SSSSCCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCSSHHHHHHHHHHT----TTSCEEEEEECSSTTSCCE
T ss_pred ccCCCChhheecCCEEEEEECCc-cCHHHHHHHHHhcCCEEeeeCCHHHHHHHHHhc----CCCCEEEEEEecCCCCceE
Confidence 45689999999999999999985 999999999999999999999999999999986 2357999999998899999
Q ss_pred EcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 105 NEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 105 W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|+||+++.+ .+| . .+.++|+.|... . |.+..|.....|+|+++
T Consensus 79 W~dg~~~~~-~~w-~-----~~~~~C~~~~~~----~--w~~~~C~~~~~fICekp 121 (122)
T 3rs1_A 79 WTNNTEYNN-MNP-I-----LGVGRYAYLSSD----R--ISSSRSYINRMWICSKL 121 (122)
T ss_dssp ETTCCBCCC-CSC-C-----CSSCSEEEEETT----E--EEEECSCSCBCBEEEEE
T ss_pred CCCCCcCCc-ccc-C-----CCCCceEEEeCC----c--EeccccCCCCCeeeecC
Confidence 999999987 455 2 135789988542 3 55999999999999985
No 127
>1wmz_A Lectin CEL-I, N-acetyl-D-galactosamine-specific C-type; C-type lectin, N-acetylgalactosamine, invertebrate, sugar binding protein; HET: NGA A2G; 1.70A {Cucumaria echinata} SCOP: d.169.1.1 PDB: 1wmy_A*
Probab=99.90 E-value=1.2e-23 Score=188.71 Aligned_cols=128 Identities=20% Similarity=0.381 Sum_probs=111.5
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHcc-------cCCCeEeeeCCHhHHHHHHHHhhhcC-CCCceEEEEeccCC
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK-------SLDSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQS 99 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~-------~~~~~L~~i~~~~e~~~i~~~~~~~~-~~~~~w~g~~~~~~ 99 (813)
.||.||..|+++||+|+... ++|.+|+..|+ .+||+||+|++++|++||.+++.... ....+||||.+...
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WiGl~~~~~ 80 (140)
T 1wmz_A 2 QCPTDWEAEGDHCYRFFNTL-TTWENAHHECVSYSCSTLNVRSDLVSVHSAAEQAYVFNYWRGIDSQAGQLWIGLYDKYN 80 (140)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTCBGGGTEEEEECCCCSHHHHHHHHHHHHHHCCSSCCEEEEEECSSS
T ss_pred cCCCcceecCCEEEEEECCC-cCHHHHHHhhhhhccCCCCCCcEEcccCCHHHHHHHHHHHhhccCCCCCEEEeeeecCC
Confidence 69999999999999999994 99999999999 99999999999999999999986532 34689999999888
Q ss_pred CCCeEEcCCCCCCccccccCCCCCCcc-cCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 100 PNLWVNEDGTNLNELDAAFLPEPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 100 ~~~~~W~dgs~~~~~~~~~~~~p~~~~-~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
++.|.|+||++++| .+|..++|++.. .++|+.|....+. .|.+..|.....|+|+..
T Consensus 81 ~~~~~W~dg~~~~~-~~W~~~~P~~~~~~~~Cv~~~~~~~~---~W~~~~C~~~~~fICe~~ 138 (140)
T 1wmz_A 81 EGDFIWTDGSKVGY-TKWAGGQPDNWNNAEDYGQFRHTEGG---AWNDNSAAAQAKYMCKLT 138 (140)
T ss_dssp TTCCEETTCCCCCC-CCBCTTCCCCGGGCEEEEEECSSTTT---CEEEEETTCCEEEEEEEE
T ss_pred CCeeEECCcCcccc-cCcCcccCCCCCCcCCcEEEccCCCC---CEeCCCCCCCceEEEEEe
Confidence 99999999999987 677777998753 6899999765432 556999999999999984
No 128
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.90 E-value=1e-22 Score=197.99 Aligned_cols=184 Identities=22% Similarity=0.331 Sum_probs=143.4
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEe---eCC--eEEEcC
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL---SGG--NLIIND 262 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~---~~~--~l~i~~ 262 (813)
.||.|+..|.+..+.+| ++++|.|.+.|.|.+.|.|+|+|..+. ....++.. .++ +|.|.+
T Consensus 5 ~pP~~~~~p~~~~v~~G-----~~v~l~C~~~g~p~~~v~W~~~~~~~~---------~~~~~~~~~~~~~~~~~L~i~~ 70 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVG-----GVASFYCAARGDPPPSIVWRKNGKKVS---------GTQSRYTVLEQPGGISILRIEP 70 (212)
T ss_dssp CCCEEEECCCCEEEETT-----SCEEEEEEEECSSCCEEEEEETTEECC---------TTSTTEEEEEETTTEEEEEESS
T ss_pred CCCEEEcCCCceEEecC-----CEEEEEEEEccCCCCeEEEEECCEECC---------CCcceeEEEEcCCCeEEEEEEe
Confidence 47999999999998887 669999999999999999999998762 12333332 233 577777
Q ss_pred Cccc-cCCeeEEEEeecCceeeEeeeeEEeeeee-------cccccCCCCceeecCCCeEEEecCCCCCCcceEEEeecc
Q psy14896 263 PRQV-EDRGSYHCKASNKFGSIISESVQLAFGFI-------GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDY 334 (813)
Q Consensus 263 ~~~~-~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~-------~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~ 334 (813)
. +. +|+|.|+|.|.|..|...+..+.|.|... |.+...+....+.+|+.++|.|.+ .|.|.+.+.|++++
T Consensus 71 v-~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~-~g~p~p~i~W~~~~ 148 (212)
T 2yd1_A 71 V-RAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKA-IGNPTPNIYWIKNQ 148 (212)
T ss_dssp C-CTTTTCSEEEEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEE-ECSSCCEEEEEETT
T ss_pred c-CCCCcCceEEEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEe-ccCCCCeEEEEECC
Confidence 5 78 99999999999999985577888888765 334444555677889999999996 78899999999999
Q ss_pred ccccccCCccEEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccC
Q psy14896 335 FPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPH 391 (813)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~ 391 (813)
.++.. ...++. ..++.|.|.++..+|+|.|+|.|.|..|... +..+.|.|...
T Consensus 149 ~~~~~-~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~--s~~~~l~V~~~ 201 (212)
T 2yd1_A 149 TKVDM-SNPRYS-LKDGFLQIENSREEDQGKYECVAENSMGTEH--SKATNLYVKVR 201 (212)
T ss_dssp EECCT-TSTTEE-EETTEEEECSCCGGGCEEEEEEEEETTEEEE--CCCEEEEEEC-
T ss_pred eEccc-CCCeEE-ccCCeEEEccCChhhCEEEEEEeecCCCcee--EEEEEEEEEec
Confidence 87533 233443 3467999999999999999999999988643 23477888754
No 129
>1dv8_A Asialoglycoprotein receptor 1; C-type lectin CRD, signaling protein; 2.30A {Homo sapiens} SCOP: d.169.1.1
Probab=99.90 E-value=2.8e-23 Score=182.89 Aligned_cols=119 Identities=25% Similarity=0.406 Sum_probs=103.7
Q ss_pred CchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcCC
Q psy14896 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDG 108 (813)
Q Consensus 29 Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~dg 108 (813)
||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||.+++. ...+||||.+. ++.|.|.||
T Consensus 1 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~WIGl~~~--~~~~~W~dg 73 (128)
T 1dv8_A 1 CPVNWVEHERSCYWFSRSG-KAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIG----PVNTWMGLHDQ--NGPWKWVDG 73 (128)
T ss_dssp CCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHC----SSCEEEEEECT--TSSCEETTC
T ss_pred CCCcceecCCEEEEEECCC-cCHHHHHHHHhhCCCEEcccCCHHHHHHHHHhhC----CCCEEeeEEcC--CCcEEeCCC
Confidence 9999999999999999985 9999999999999999999999999999999973 35799999985 789999999
Q ss_pred CCC--CccccccCCCCCCc------ccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 109 TNL--NELDAAFLPEPADN------VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 109 s~~--~~~~~~~~~~p~~~------~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
+++ .| .+|..++|++. ..++|+.|... ..|.+..|.....|+|++.
T Consensus 74 ~~~~~~~-~~W~~g~P~~~~~~~~~~~~~C~~~~~~-----g~W~~~~C~~~~~fICe~~ 127 (128)
T 1dv8_A 74 TDYETGF-KNWRPEQPDDWYGHGLGGGEDCAHFTDD-----GRWNDDVCQRPYRWVCETE 127 (128)
T ss_dssp CCSTTSC-CCBCTTCCCCCCTTSSSSCCCEEEECTT-----SCEEEECTTSCBEEEEEEE
T ss_pred CcCCccc-ccCCCCCCCCcccccCCCCCcCceecCC-----CcCCCccCCCCcceeeeeC
Confidence 998 66 67777799873 46899998532 2455999999999999974
No 130
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.90 E-value=2.6e-23 Score=198.27 Aligned_cols=165 Identities=20% Similarity=0.337 Sum_probs=128.6
Q ss_pred ceecc-CCCceEEeCCCCCCCc--cEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecCccccC
Q psy14896 578 EIGNQ-NWGKAMFCDPPTNYPG--VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNG 654 (813)
Q Consensus 578 ~~~~~-g~~~~l~C~~~~~~p~--~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 654 (813)
..+.+ |+.++|.|.+ .+.|. +.+.|+|++.++. ..... ..+++|.|.+++.+|+|.|+|.|.|. |.. .
T Consensus 12 ~~v~~~G~~v~l~C~~-~~~~~~~~~v~W~~~~~~~~--~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~---~ 82 (190)
T 2wv3_A 12 VIIRDSLLPVTLQCNL-TSSSHTLMYSYWTKNGVELT--ATRKN--ASNMEYRINKPRAEDSGEYHCVYHFV-SAP---K 82 (190)
T ss_dssp EECCCSSSCEEEEEEE-EECSSCEEEEEEEETTEECT--TCCBC--CSEEEEEESSCCGGGCEEEEEEEEET-TEE---E
T ss_pred EEEccCCceEEEEEEe-ccCCCCceEEEEEECCEECc--ccceE--eccEEEEEecCCcccCEEEEEEEEeC-Ccc---c
Confidence 33444 9999999998 56665 8999999997632 22221 14567999999999999999999998 543 3
Q ss_pred ceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEe--CCcccC---CCceee----ecceE
Q psy14896 655 PFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR--RGSPLP---RNAYFE----NFNRI 725 (813)
Q Consensus 655 ~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k--~g~~l~---~~~~~~----~~~~~ 725 (813)
..+.|.|..+|.+... .....+.+|+.++|.|.+.|.|.|.|+|+| +|..+. .+.++. ....+
T Consensus 83 ~~~~l~V~~~p~~~~~--------~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 154 (190)
T 2wv3_A 83 ANATIEVKAAPDITGH--------KRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTE 154 (190)
T ss_dssp EEEEEEEECCCEEEEE--------CSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEE
T ss_pred ccEEEEEecCCccccc--------CCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeE
Confidence 3478888888765432 122567899999999999999999999999 777663 222222 12348
Q ss_pred EEECCCC-CCCCEEEEEEEEcCCCceEEEEEEEEE
Q psy14896 726 LTIPNVK-VEDQGEYICRASNDRSALESSVTISIQ 759 (813)
Q Consensus 726 L~i~~v~-~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 759 (813)
|.|.+++ .+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 155 L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 155 LNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 9999999 799999999999999999999999986
No 131
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.89 E-value=1.8e-23 Score=203.44 Aligned_cols=193 Identities=19% Similarity=0.276 Sum_probs=139.6
Q ss_pred ecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCC---CeEEEeeCccE-----EEEeecccCCee
Q psy14896 567 FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEED---KRVFVSYDGAL-----YFSALEQIDAGN 638 (813)
Q Consensus 567 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~---~~~~~~~~~~L-----~i~~~~~~d~G~ 638 (813)
.+|.+...+....+.+|+.++|.|.+ .+.|.+.+.|+|++..+..... .......++.+ .|.+++.+|+|.
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 86 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKA-EGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEE-EEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEE
T ss_pred CCcceecCCCceEEeCCCcEEEEEEc-CCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeE
Confidence 45666666677788999999999999 7889999999999876432221 12334445544 445678999999
Q ss_pred EEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEe-cCCCCCeEEEEeCCcccCCCc
Q psy14896 639 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-FGYPVPSYNWTRRGSPLPRNA 717 (813)
Q Consensus 639 Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~-~g~P~p~i~W~k~g~~l~~~~ 717 (813)
|+|.|.|..|.... ..+.|.|...+..... ......+.+|+.++|.|.+ .|.|.|.|+|+|+|..+....
T Consensus 87 Y~C~~~n~~g~~~~--~~~~l~V~~~~~~~~~-------~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~ 157 (212)
T 2v9r_A 87 YVCVARNYLGEAVS--HDASLEVAILRDDFRQ-------NPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKD 157 (212)
T ss_dssp EEEEEEETTEEEEC--CCEEEEECEECSSCSB-------CCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTS
T ss_pred EEEEEECCCCceee--cceEEEEEecccccee-------CCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCc
Confidence 99999998775422 2356777654432211 2223567899999999999 899999999999999987543
Q ss_pred -eeeecceEEEECCCCCCCCEEEEEEEEcCCCceEE-EEEEEEEcCCcccccCC
Q psy14896 718 -YFENFNRILTIPNVKVEDQGEYICRASNDRSALES-SVTISIQAEPNFTIPLT 769 (813)
Q Consensus 718 -~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~-~~~l~V~~~P~~~~~~~ 769 (813)
++...++.|.|.+++.+|+|.|+|.|.|..|...+ .+.|.|..+|.|...|.
T Consensus 158 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~~~P~ 211 (212)
T 2v9r_A 158 ERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKAAA 211 (212)
T ss_dssp TTEEEETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---------
T ss_pred ceEEccCCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHhhhcc
Confidence 34445678999999999999999999999998765 49999999999876543
No 132
>1ukm_B EMS16 B chain, EMS16 subunit B; domain swapping, C-type lectin, toxin; HET: NAG; 1.90A {Echis multisquamatus} SCOP: d.169.1.1 PDB: 1v7p_B*
Probab=99.89 E-value=2.5e-23 Score=183.23 Aligned_cols=121 Identities=17% Similarity=0.279 Sum_probs=106.4
Q ss_pred CchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEc
Q psy14896 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (813)
Q Consensus 29 Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~ 106 (813)
||.||..|+++||+|+... ++|.+|+..|+. +||+||+|+|++|++||.+++........+||||.+...++.|.|.
T Consensus 1 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WiGl~~~~~~~~~~W~ 79 (128)
T 1ukm_B 1 CPLGWSSFDQHCYKVFEPV-KNWTEAEEICMQQHKGSRLASIHSSEEEAFVSKLASKALKFTSMWIGLNNPWKDCKWEWS 79 (128)
T ss_dssp CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHCSSCEEEEEEECTTTTCCEEET
T ss_pred CCCcCEecCCEeEEEECCc-cCHHHHHHHHhccCCccEEcccCCHHHHHHHHHHHHhcCCcCcEEEecccCCCCCceEeC
Confidence 9999999999999999984 999999999999 8999999999999999999986543346899999998888999999
Q ss_pred CCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 107 DGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 107 dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
||++++| .+|. ++| +|+.|....+ ...|.+..|.....|+|++.
T Consensus 80 dg~~~~~-~~W~-g~P------~C~~~~~~~~--~~~w~~~~C~~~~~fICe~~ 123 (128)
T 1ukm_B 80 DNARFDY-KAWK-RRP------YCTVMVVKPD--RIFWFTRGCEKSVSFVCKFL 123 (128)
T ss_dssp TCCCCCC-CCBC-CCC------EEEEEEECSS--CEEEEEEETTSCEEEEEEEE
T ss_pred CCCcccc-CCCC-CCC------CcEEEeCCCC--CCeEeCCCCCCCcCeEeeec
Confidence 9999987 6777 777 8999976543 24556999999999999985
No 133
>3g8k_A Lectin-related NK cell receptor LY49L1; natural killer cell receptor, immune system; 2.00A {Mus musculus} SCOP: d.169.1.1 PDB: 1qo3_C 3cad_A
Probab=99.89 E-value=1.6e-23 Score=184.97 Aligned_cols=119 Identities=18% Similarity=0.277 Sum_probs=104.3
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcC
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~d 107 (813)
.||.||..|+++||+|+.. .++|.+|+..|+.+||+||+|+|++|++||.+++ ....+||||.+...++.|.|+|
T Consensus 6 ~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~g~~La~i~s~~e~~fl~~~~----~~~~~WIGl~~~~~~~~w~W~d 80 (130)
T 3g8k_A 6 GFEKYWFCYGIKCYYFVMD-RKTWSGCKQTCQISSLSLLKIDNEDELKFLKLLV----PSDSYWIGLSYDNKKKDWAWIN 80 (130)
T ss_dssp CBCSEEEEETTEEEEEBSS-CBCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHS----CSSEEEEEEEEETTTTEEEEGG
T ss_pred CCChhhhhhCCEEEEEECC-CCCHHHHHHHHHhCCCeEcccCCHHHHHHHHHhc----CCCCEEEeeeccCCCCceEeCC
Confidence 4999999999999999999 4999999999999999999999999999999886 2367999999988899999999
Q ss_pred CCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 108 GTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 108 gs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|+++.+ +|+.++|+ ...++|+.|.. + . |.+..|.....|+|++.
T Consensus 81 g~~~~~--~~~~~~~~-~~~~~Cv~~~~--~--~--w~~~~C~~~~~fICe~~ 124 (130)
T 3g8k_A 81 NGPSKL--ALNTMKYN-IRDGGCMLLSK--T--R--LDNDNCDKSFICICGKR 124 (130)
T ss_dssp GCCCCC--CCCGGGCC-GGGCSEEEEES--S--C--EEEECTTSCBEEEEEEE
T ss_pred CCccCc--ccccCCCC-CCCCCceEEeC--C--e--EECCCCCCCCeEeeeee
Confidence 999986 57666665 35789999843 2 3 55999999999999995
No 134
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.89 E-value=1.3e-23 Score=220.85 Aligned_cols=220 Identities=16% Similarity=0.271 Sum_probs=148.6
Q ss_pred CCceeccCCCceEEeCCCCCC--CccEEEEccC--CCCCcc---------------cCCCeEEEeeC-----ccEEEEee
Q psy14896 576 APEIGNQNWGKAMFCDPPTNY--PGVNYYWARD--YFPNFV---------------EEDKRVFVSYD-----GALYFSAL 631 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~--p~~~v~W~k~--~~~~~~---------------~~~~~~~~~~~-----~~L~i~~~ 631 (813)
.+..+.+|+.++|.|.+ .+. +.+.|.|+|+ +..... ....|+.+..+ ++|+|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (344)
T 1za6_B 8 GAEVVKPGASVKISCKA-SGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSL 86 (344)
T ss_dssp CCEEECTTCCEEEEEEE-ESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCeEEeCCCcEEEEEEc-CCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCC
Confidence 34567889999999999 454 4688999997 332110 12356666543 36999999
Q ss_pred cccCCeeEEEEEEeeecCccccCceeeEEEccCC-CccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CC-CeEEEEe
Q psy14896 632 EQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PV-PSYNWTR 708 (813)
Q Consensus 632 ~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p-~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~-p~i~W~k 708 (813)
+.+|+|.|+|.|.|..+... ....|.|...+ ....+.. ......+.+|+.++|.|.+.|. |. |.|+|+|
T Consensus 87 ~~~D~G~Y~C~~~n~~~~~~---~~~~l~V~~~~~~~P~i~~-----~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k 158 (344)
T 1za6_B 87 RSEDTAVYFCTRSLNMAYWG---QGTLVTVSSASTKGPSVFP-----LAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNS 158 (344)
T ss_dssp CGGGCEEEEEEETTTTCEEC---CCEEEEECSSCCBCCEEEE-----ECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETT
T ss_pred CcccCEEEEEEEecCcceec---CcEEEEEecCCCCCCeEEE-----ccccccccCCCcEEEEEEEeeEECCCeEEEEec
Confidence 99999999999998443222 23567777322 1111110 0111346799999999999987 65 7999999
Q ss_pred CCcccCCC---------ceeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEE----------------------
Q psy14896 709 RGSPLPRN---------AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS---------------------- 757 (813)
Q Consensus 709 ~g~~l~~~---------~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~---------------------- 757 (813)
+|..+... ..+ ...+.|+|.++..+| |.|+|.|.|..|.......+.
T Consensus 159 ~g~~~~~~~~~~~~~~~~~~-~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 236 (344)
T 1za6_B 159 GALTSGVHTFPAVLQSSGLY-SLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGS 236 (344)
T ss_dssp TTBCTTEEECCCEECTTSCE-EEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC------------------
T ss_pred CCccCceeECCCeECCCCCE-EEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCcccccc
Confidence 99865211 111 113479999999888 999999999988754433332
Q ss_pred --EEcCCcccccCCceeecCCCeEEEEEEEccc-C-CceEEEEECCEeccccc
Q psy14896 758 --IQAEPNFTIPLTDKHMDNQADLTWTCEAFGV-P-DVTYSWFRNGELGHQMT 806 (813)
Q Consensus 758 --V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~-p-~~~v~W~k~g~~l~~~~ 806 (813)
+..+|.+...+......+|..++|.|.+.|. | .+.|+|+|||++|....
T Consensus 237 ~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~ 289 (344)
T 1za6_B 237 GGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYK 289 (344)
T ss_dssp --CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEE
T ss_pred CCCCcCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcE
Confidence 2356766543322223346669999999995 4 36899999999997543
No 135
>2bpd_A Dectin-1; receptor, beta-glucan, fungal recognition, C-type lectin-like domain, CTLD, carbohydrate; 1.5A {Mus musculus} PDB: 2bph_A 2bpe_A 2cl8_A*
Probab=99.89 E-value=2.3e-23 Score=186.61 Aligned_cols=126 Identities=21% Similarity=0.292 Sum_probs=106.8
Q ss_pred cCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEE
Q psy14896 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (813)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W 105 (813)
...||.||..|+++||+|+.. .++|.+|+..|+.+||+||+|+|++|++||.+++... ....+||||.+...++.|.|
T Consensus 14 ~~~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~-~~~~~WIGl~~~~~~~~w~W 91 (142)
T 2bpd_A 14 SQSCLPNWIMHGKSCYLFSFS-GNSWYGSKRHCSQLGAHLLKIDNSKEFEFIESQTSSH-RINAFWIGLSRNQSEGPWFW 91 (142)
T ss_dssp -CCCCTTCEEETTEEEEEEEE-EECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHGGG-TTSEEEEEEECSSTTSCCEE
T ss_pred CCCCCccceecCCEEEEEECC-CCCHHHHHHHHHHcCCEEeeeCCHHHHHHHHHHHhcc-CCCCEEEEeecCCCCCCeEe
Confidence 456999999999999999998 4999999999999999999999999999999998653 34689999999888999999
Q ss_pred cCCCCCCccccccCC-CCCC-cccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 106 EDGTNLNELDAAFLP-EPAD-NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 106 ~dgs~~~~~~~~~~~-~p~~-~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.||+++.| .+|..+ +|++ ...++|+.|.. + . |.+..|.....|+|++.
T Consensus 92 ~dg~~~~~-~~w~~~~~~~~~~~~~~Cv~~~~--~--~--W~d~~C~~~~~fICe~~ 141 (142)
T 2bpd_A 92 EDGSAFFP-NSFQVRNAVPQESLLHNCVWIHG--S--E--VYNQICNTSSYSICEKE 141 (142)
T ss_dssp TTSCBCCS-SSCCEECCCCSCCSCCCEEEEET--T--E--EEEECTTSCEEEEEEEC
T ss_pred CCCCcccc-ccccccCCCCCCCCCCCCcEEcC--C--e--EECcCCCCCceeeeeee
Confidence 99999997 566554 3433 35789999852 2 3 45999999999999974
No 136
>1oz7_B Echicetin B-chain; platelet aggregation, dimer, toxin; 2.40A {Echis carinatus} SCOP: d.169.1.1
Probab=99.89 E-value=1.6e-23 Score=183.06 Aligned_cols=120 Identities=21% Similarity=0.349 Sum_probs=105.1
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEE
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W 105 (813)
.||.||..|+++||+|+... ++|.+|+..|+. +||+||+|+|++|++||.+++........+||||.+...++.|.|
T Consensus 1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W 79 (123)
T 1oz7_B 1 NCLPDWSVYEGYCYKVFKER-MNWADAEKFCTKQHKDGHLVSFRNSKEVDFVISLAFPMLKNDLVWIGLTDYWRDCNWEW 79 (123)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCCSSHHHHHHHTSSTTTTCSEEEEEEECCCCGGGEEE
T ss_pred CCCCCcEEcCCEEEEEECCc-cCHHHHHHHHhccCCCcEECCcCCHHHHHHHHHHHHhcCCCCCEEEeeeeCCCCCCEEE
Confidence 49999999999999999984 999999999999 999999999999999999988543224689999999888899999
Q ss_pred cCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 106 ~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.||++++| .+|. ++| +|+.|....+ .|.+..|.....|+|++.
T Consensus 80 ~dg~~~~~-~~W~-g~P------~C~~~~~~~g----~w~~~~C~~~~~~ICe~~ 122 (123)
T 1oz7_B 80 SDGAQLDY-KAWD-NER------HCFIYKNTDN----QWTRRDCTWTFSFVCKCP 122 (123)
T ss_dssp TTCCCCCS-CCBC-SST------TEEEEEGGGT----EEEEECTTSCEEEEEEEE
T ss_pred cCCCcccc-cCCC-CCC------CeEEEECCCC----cEeCCCCCCCeeEEEeEe
Confidence 99999987 6777 776 8999976543 455999999999999974
No 137
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.89 E-value=9.3e-23 Score=195.27 Aligned_cols=182 Identities=22% Similarity=0.273 Sum_probs=140.3
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCC--eEEEcCCcc
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGG--NLIINDPRQ 265 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~ 265 (813)
.+|.|...|.+..+.+| ++++|.|.+.|.|.+.+.|+|+|..+.... ....+....++ +|.|.+. +
T Consensus 4 ~~P~~~~~~~~~~v~~G-----~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~------~~~~~~~~~~~~~~L~i~~~-~ 71 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEG-----STATFEAHISGFPVPEVSWFRDGQVISTST------LPGVQISFSDGRAKLTIPAV-T 71 (194)
T ss_dssp EEEEEEECCCCEEEETT-----SCEEEEEEEEEESCCEEEEEESSSBCCTTT------STTCEEEEETTEEEEEESSC-C
T ss_pred CCCeEEccCCceEEECC-----CEEEEEEEEEecCCCEEEEEECCEEccccc------CCceEEEeCCCEEEEEECCC-C
Confidence 36889999999988887 669999999999999999999998763211 11223334444 6777775 8
Q ss_pred ccCCeeEEEEeecCceeeEeeeeEEeee---eecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCC
Q psy14896 266 VEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEED 342 (813)
Q Consensus 266 ~~d~G~Y~C~a~n~~g~~~s~~~~l~v~---~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~ 342 (813)
.+|+|.|+|.|.|..|.. ...+.|.|. .+|.+........+..|+.+.|.|.+ .|.|.+.+.|+|+|.++. ..
T Consensus 72 ~~d~G~Y~C~~~n~~~~~-~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~--~~ 147 (194)
T 2a38_A 72 KANSGRYSLKATNGSGQA-TSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRV-TGIPTPVVKFYRDGAEIQ--SS 147 (194)
T ss_dssp GGGCEEEEEEEEETTEEE-EEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEE-EEESCCEEEEEETTEECC--CS
T ss_pred cccCEEEEEEEEcCCceE-eEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEE-EEecCCeEEEEECCEECC--CC
Confidence 999999999999998876 556777776 45555555666778889999999996 778999999999998753 44
Q ss_pred ccEEEccCc---cEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEE
Q psy14896 343 KRVFVSYDG---ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388 (813)
Q Consensus 343 ~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v 388 (813)
.++.+..++ +|.|.++..+|+|.|+|.|.|..|.... .+.|.|
T Consensus 148 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~---~~~l~V 193 (194)
T 2a38_A 148 LDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATS---TAELLV 193 (194)
T ss_dssp SSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEE---EEEEEE
T ss_pred CcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEE---EEEEEE
Confidence 455555444 7999999999999999999999875432 255554
No 138
>3bx4_A Aggretin alpha chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_A
Probab=99.89 E-value=1.8e-23 Score=186.43 Aligned_cols=125 Identities=16% Similarity=0.244 Sum_probs=107.4
Q ss_pred CCCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCCC---CceEEEEe--ccCC
Q psy14896 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQ---RRKWYFGG--TQQS 99 (813)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~---~~~w~g~~--~~~~ 99 (813)
..||.||..|+++||+|+... ++|.+|+..|+. .||+||+|+|++|++||.+++...... ..+||||. +...
T Consensus 3 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~~WIGl~~~~~~~ 81 (136)
T 3bx4_A 3 EDCDFGWSPYDQHCYQAFNEQ-KTWDEAEKFCRAQENGAHLASIESNGEADFVSWLISQKDELADEDYVWIGLRAQNKEQ 81 (136)
T ss_dssp -CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTSTTTCEECCCCSHHHHHHHHHHHHTCGGGTTCCEEEEEEEECCCSS
T ss_pred CCCCCCCEecCCEEEEEECCC-cCHHHHHHHHhccCCCcEEcccCCHHHHHHHHHHHHhhcccCccCCEEEeeeccCCCC
Confidence 469999999999999999984 999999999999 899999999999999999998543222 67999999 8878
Q ss_pred CCCeEEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 100 PNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 100 ~~~~~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
++.|.|+||++++| .+|..++|+ +|+.|....+ ...|.+..|.....|+|+..
T Consensus 82 ~~~~~W~dg~~~~~-~~W~~~~P~-----~C~~~~~~~~--~~~W~~~~C~~~~~fICe~~ 134 (136)
T 3bx4_A 82 QCSSEWSDGSSVSY-ENLIDLHTK-----KCGALEKLTG--FRKWVNYYCEQMHAFVCKLL 134 (136)
T ss_dssp SSCCBCTTSCBCCC-CCCTTCCCC-----CEEEEEGGGT--TTSEEEECTTSCEEEEEEEC
T ss_pred CCceEeCCCCccCc-ccccCCCCC-----ccEEEEecCC--CCeEeCCCCCCCcceEEeec
Confidence 89999999999987 677666886 8999976543 24566999999999999984
No 139
>3ubu_A Agglucetin subunit alpha-1; platelet inhibiting, agkisacucetin, dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding; 1.91A {Deinagkistrodon acutus}
Probab=99.89 E-value=2.1e-23 Score=184.81 Aligned_cols=124 Identities=19% Similarity=0.306 Sum_probs=107.3
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHcccC--CCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCC--CCCe
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQS--PNLW 103 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~--~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~--~~~~ 103 (813)
.||.||..|+++||+++.. .++|.+|+..|+.+ ||+||+|++++|++||..++........+||||.+... ++.|
T Consensus 3 ~Cp~gw~~~~~~CY~~~~~-~~tw~~A~~~C~~~~~G~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~~ 81 (131)
T 3ubu_A 3 DCLPGWSAYDQSCYRVFKL-LKTWDDAEKFCTERPKGGHLVSIESAGERDFVAQLVSENKQTDNVWLGLKIQSKGQQCST 81 (131)
T ss_dssp CCCTTCEEETTEEEEEEEE-EECHHHHHHHHHTSTTCCEECCCCSHHHHHHHHHHHHHTTCCSCEEEEEEEECSSSSSCC
T ss_pred CCCccCEecCCEeeEEcCC-CcCHHHHHHHHhccCCCceEceeCCHHHHHHHHHHHHhcCCCCCEEEeEecCCCCCCCce
Confidence 6999999999999999998 49999999999999 89999999999999999998665434589999999877 8999
Q ss_pred EEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 104 VNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 104 ~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.|+||++++| .+|..++| ++|+.|....+ ...|.+..|.....|+|+++
T Consensus 82 ~W~dg~~~~~-~~w~~~~~-----~~Cv~~~~~~~--~~~W~~~~C~~~~~fiCe~~ 130 (131)
T 3ubu_A 82 EWTDGSSVSY-ENFSEYQS-----KKCFVLEKNTG--FRTWLNLNCGSEYSFVCKSP 130 (131)
T ss_dssp BCTTSCBCCC-CCBCTTTC-----CCEEEECGGGT--SCSEEEECTTCCEEEEEEEC
T ss_pred EeCCCCccce-eccCCCCC-----CCcEEEeCCCC--CCeEcCCCCCCCceeEEecC
Confidence 9999999997 57665554 78999976544 33566999999999999984
No 140
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.89 E-value=3.1e-23 Score=196.28 Aligned_cols=172 Identities=19% Similarity=0.233 Sum_probs=133.8
Q ss_pred cccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEee-----CccEEEEeecccCCeeEEEEEE
Q psy14896 570 EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY-----DGALYFSALEQIDAGNYSCNVQ 644 (813)
Q Consensus 570 ~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~ 644 (813)
.+...+....+.+|+.++|.|.+ .+.|.+.+.|+|++..+. ...+..... .++|.|.+++.+|+|.|+|.|.
T Consensus 4 ~~~~~p~~~~v~~G~~v~l~C~~-~~~p~~~v~W~k~~~~~~--~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 80 (182)
T 1rhf_A 4 KLMGAPVKLTVSQGQPVKLNCSV-EGMEEPDIQWVKDGAVVQ--NLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVE 80 (182)
T ss_dssp ---CCCEEEEEETTCCEEEEEEE-ESCSSCCEEEEETTEECC--SSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEES
T ss_pred EEEeCCcceEEeCCCcEEEEEEE-eCCCCCeEEEEECCeecC--CCCceEEEecCCCceEEEEEeecCcccCeEEEEEEE
Confidence 34444555677889999999999 688999999999997643 333333332 2579999999999999999999
Q ss_pred eeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCC-eEEEEeCCcccCCCceeeecc
Q psy14896 645 SKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP-SYNWTRRGSPLPRNAYFENFN 723 (813)
Q Consensus 645 n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p-~i~W~k~g~~l~~~~~~~~~~ 723 (813)
|..|.. ....+.|.|..+|.+... .....+.+|+.++|.|.+.|.|.| .|+|+|+|..+..... ..
T Consensus 81 ~~~~~~--~~~~~~l~V~~~p~~~~~--------~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~---~~ 147 (182)
T 1rhf_A 81 DGGETE--ISQPVWLTVEGVPFFTVE--------PKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP---SP 147 (182)
T ss_dssp SCTTCE--ECCCEEEEEECSCEEEEC--------CCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE---SS
T ss_pred cCCCcE--EEEEEEEEEecCCeEEec--------CcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC---Cc
Confidence 986542 233578888888765431 122568899999999999999999 9999999999866543 57
Q ss_pred eEEEECCCCCCCCEEEEEEEEcCCCceE-EEEEEEEE
Q psy14896 724 RILTIPNVKVEDQGEYICRASNDRSALE-SSVTISIQ 759 (813)
Q Consensus 724 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~-~~~~l~V~ 759 (813)
..|.|.++ +|+|.|+|.|.|..|... .++.|.|+
T Consensus 148 ~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 148 SVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp EEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred eEEEEecc--ccCeEEEEEEECCCCCcccceEEEEeC
Confidence 78999998 599999999999999885 48888874
No 141
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.89 E-value=8.9e-23 Score=198.35 Aligned_cols=189 Identities=23% Similarity=0.328 Sum_probs=138.5
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEee---CCeEEEcCCc
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS---GGNLIINDPR 264 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~ 264 (813)
.||.|+..|.+..+.+| +++.|.|.+.|.|.+.|.|+|+|..+.. ......... +..|.|.+..
T Consensus 5 ~~P~~~~~p~~~~v~~G-----~~v~L~C~~~g~p~~~v~W~k~~~~~~~--------~~~~~~~~~~~~~~~L~i~~v~ 71 (212)
T 2yd6_A 5 TPPRFTRTPVDQTGVSG-----GVASFICQATGDPRPKIVWNKKGKKVSN--------QRFEVIEFDDGSGSVLRIQPLR 71 (212)
T ss_dssp EEEEEEECCCCEEEETT-----SCEEEEEEEEEESCCEEEEEETTEECCC--------TTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCeEEeCcceeEEecC-----CeEEEEEEEeeCCCCEEEEEECCcCCCC--------CceeEEEEcCCCceEEEEeccC
Confidence 46899999999988887 6699999999999999999999987631 111111111 2346676641
Q ss_pred cccCCeeEEEEeecCceeeEeeeeEEeeeeec-------ccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccc
Q psy14896 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIG-------EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPN 337 (813)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~-------~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~ 337 (813)
+.+|+|.|+|.|.|..|.. +..+.|.|...+ .+...+....+.+|+.++|.|.+ .|.|.+.+.|+|+|.++
T Consensus 72 ~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~-~g~p~p~v~W~~~g~~l 149 (212)
T 2yd6_A 72 TPRDEAIYECVASNNVGEI-SVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAA-SGNPDPEITWFKDFLPV 149 (212)
T ss_dssp TTTTCEEEEEEEEETTEEE-EEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEE-ECSSCCEEEEEETTEEC
T ss_pred CCCCCeEEEEEEEcCCCcE-EEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEe-cCCCCCeEEEEECCccc
Confidence 4899999999999999986 667888886642 23334455677789999999996 68899999999999876
Q ss_pred cccC-CccEEEcc---CccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCc
Q psy14896 338 FVEE-DKRVFVSY---DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 393 (813)
Q Consensus 338 ~~~~-~~~~~~~~---~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~ 393 (813)
.... ..++.... .+.|.|.++..+|+|.|+|.|.|..|... +..+.|.|...+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~--s~~a~l~~~~~~~ 207 (212)
T 2yd6_A 150 DTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRY--SAPANLYVRGTKH 207 (212)
T ss_dssp ------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEE--CCCEEEEEEC---
T ss_pred cCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccc--cccccEEEEeccc
Confidence 4331 23444433 36899999999999999999999998543 4457788776544
No 142
>3c22_A C-type lectin domain family 4 member K; coiled coil, glycoprotein, membrane, signal-anchor, transmembrane, immune system, sugar binding protein; 1.50A {Homo sapiens} PDB: 3p5g_A* 3p5d_A* 3p5f_A* 3p5e_A* 3p5h_A* 3p5i_A* 3p7g_A* 3p7f_A* 3p7h_A* 3bc7_A* 3bbs_A* 3bc6_A*
Probab=99.89 E-value=3.2e-23 Score=189.21 Aligned_cols=128 Identities=20% Similarity=0.222 Sum_probs=107.9
Q ss_pred ccCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeE
Q psy14896 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (813)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~ 104 (813)
....||.||..|+++||+|+.. .++|.+|+..|+.+||+||+|+|++|++||.+++. ...+||||.+...++.|.
T Consensus 19 ~~~~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~WIGl~~~~~~~~w~ 93 (156)
T 3c22_A 19 ILQVVSQGWKYFKGNFYYFSLI-PKTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAG----GLIYWIGLTKAGMEGDWS 93 (156)
T ss_dssp -----CCCCEEETTEEEEECSS-CBCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHT----TCCEEEEEEEETTTTEEE
T ss_pred hhccCCCCCEEcCCEEEEEECC-CCCHHHHHHHHHhCCCEEeecCCHHHHHHHHHhhc----CCcEEEeeeccCCCCceE
Confidence 4557999999999999999998 49999999999999999999999999999999873 457999999988899999
Q ss_pred EcCCCCCCc---cccccCCCCCCc-ccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 105 NEDGTNLNE---LDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 105 W~dgs~~~~---~~~~~~~~p~~~-~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|.||+++.+ +.+|..++|++. ..++|+.|.... ...|.+..|.....|+|++.
T Consensus 94 W~dG~~~~~~~~~~~W~~geP~~~~~~~~Cv~~~~~~---~~~W~d~~C~~~~~fICe~~ 150 (156)
T 3c22_A 94 WVDDTPFNKVQSARFWIPGEPNNAGNNEHCGNIKAPS---LQAWNDAPCDKTFLFICKRP 150 (156)
T ss_dssp ETTCCCCCHHHHGGGBCTTCCCCGGGCCCEEEECSSS---SSCEEEECTTSCBEEEEEEE
T ss_pred eCCCCccccccccCcCCCCCCCCCCCCCCceEECCCC---CCcEECCCCCCCeeEEEeeC
Confidence 999999986 356777799875 578999986543 24455999999999999995
No 143
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.89 E-value=4.2e-23 Score=200.80 Aligned_cols=177 Identities=20% Similarity=0.304 Sum_probs=137.4
Q ss_pred ccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCC----------cccCCCeEEEeeCccEEEEeecccCCeeEEEE
Q psy14896 573 LKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPN----------FVEEDKRVFVSYDGALYFSALEQIDAGNYSCN 642 (813)
Q Consensus 573 ~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~----------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 642 (813)
..+....+.+|+.++|.|.+ .+.|.+.|.|+|++..+ ......++.... ++|.|.+++.+|+|.|+|.
T Consensus 6 ~~~~~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~L~i~~v~~~D~G~Y~C~ 83 (212)
T 1f97_A 6 TAQSDVQVPENESIKLTCTY-SGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS-SGITFSSVTRKDNGEYTCM 83 (212)
T ss_dssp CSCSEEEEETTCCEEEECEE-ESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET-TEEEESCCCGGGCEEEEEE
T ss_pred ecCCCeEEEcCCCEEEEeEe-CCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec-eeEEEcccCcccCeEEEEE
Confidence 34455667889999999999 68899999999998652 122334554443 7899999999999999999
Q ss_pred EEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEE-ecCCCCCeEEEEeCCc-ccCCCce--
Q psy14896 643 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECV-AFGYPVPSYNWTRRGS-PLPRNAY-- 718 (813)
Q Consensus 643 a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~-~~g~P~p~i~W~k~g~-~l~~~~~-- 718 (813)
|.|..|. ......+.|.|..+|....... +..+.+|+.++|.|. +.|.|.|.|+|+|+|. .+.....
T Consensus 84 ~~~~~g~-~~~~~~~~l~V~~~p~~~~~~~--------~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~ 154 (212)
T 1f97_A 84 VSEEGGQ-NYGEVSIHLTVLVPPSKPTISV--------PSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKT 154 (212)
T ss_dssp EEETTSS-SEEEEEEEEEEEBCCCCCEEEC--------CSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----C
T ss_pred EEccCCC-cccEEEEEEEEEcCCCCcccCC--------ccccCCCCeEEEEEEcccCcCCCEEEEEeCCccccccccccc
Confidence 9998762 2334457888888886654322 245789999999999 7899999999999999 8865432
Q ss_pred ---------eeecceEEEECCCCCCCCEEEEEEEEcCCCce--EEEEEEEEEc
Q psy14896 719 ---------FENFNRILTIPNVKVEDQGEYICRASNDRSAL--ESSVTISIQA 760 (813)
Q Consensus 719 ---------~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~--~~~~~l~V~~ 760 (813)
.....+.|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..
T Consensus 155 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 155 RAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp BSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred ccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 12346789999999999999999999999988 5677777764
No 144
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.89 E-value=1.4e-22 Score=193.39 Aligned_cols=172 Identities=16% Similarity=0.273 Sum_probs=141.7
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCC-CCeEEEee-cccccccccccccccCCCccEEe-----eCCeEEEc
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYP-NPSYEWFK-EDYVQDRLVANLIDPLSDKRFTL-----SGGNLIIN 261 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P-~p~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~-----~~~~l~i~ 261 (813)
|+.|...|.+..+.+| ++++|.|.+.+.| .+.+.|+| +|..+.. ...++.. .+++|.|.
T Consensus 2 p~~v~~~p~~~~v~~G-----~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~---------~~~~~~~~~~~~~~~~L~i~ 67 (191)
T 1epf_A 2 VLQVDIVPSQGEISVG-----ESKFFLCQVAGDAKDKDISWFSPNGEKLSP---------NQQRISVVWNDDDSSTLTIY 67 (191)
T ss_dssp -CCEEEESSSEEEETT-----CCEEEEEEECCCSCCCEEEEECTTSCEECC---------BSSSEEEEEEETTEEEEEEC
T ss_pred ceEEEecCCCcEEcCC-----CCEEEEEECCCCCCCceEEEEeCCCccccC---------CCCeEEEEECCCCceEEEEc
Confidence 5678888899988887 6699999999876 88999999 8876531 2233333 13567887
Q ss_pred CCccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccC
Q psy14896 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE 341 (813)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~ 341 (813)
+. +.+|+|.|+|.|.|..|...+..+.|.|..+|.+...+....+.+|+.++|.|.+ .|.|.+.+.|++++.++....
T Consensus 68 ~~-~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~ 145 (191)
T 1epf_A 68 NA-NIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDV-VSSLPPTIIWKHKGRDVILKK 145 (191)
T ss_dssp SC-CGGGCEEEEEEEEETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEE-ECSSCCEEEEEETTEEGGGGC
T ss_pred cC-CcccCEEEEEEEEcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEE-CCCCCCEEEEEECCEEeeccC
Confidence 75 8999999999999998555577888888877777777777788899999999996 588999999999999876667
Q ss_pred CccEEEccCccEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 342 ~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
..++....++.|.|.++..+|+|.|+|.|.|..+.
T Consensus 146 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 180 (191)
T 1epf_A 146 DVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARG 180 (191)
T ss_dssp CTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGT
T ss_pred CceEEEecCCeEEECCCChhhCEEEEEEEEEecce
Confidence 77888888899999999999999999999998753
No 145
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.89 E-value=4e-23 Score=197.48 Aligned_cols=167 Identities=24% Similarity=0.406 Sum_probs=132.6
Q ss_pred ceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEee-CccEEEEeecccCCeeEEEEEEeeecCccccCce
Q psy14896 578 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 656 (813)
Q Consensus 578 ~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~ 656 (813)
..+.+|+.++|.|.+ .+.|.+.+.|+|++.. +....++.+.. +++|.|.+++.+|+|.|+|.|.|..|... ..
T Consensus 14 ~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~--~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~---~~ 87 (192)
T 2va4_A 14 ATAERGEEMTFSCRA-SGSPEPAISWFRNGKL--IEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDE---KQ 87 (192)
T ss_dssp EETTSCCCEEEECEE-ECSSCCEEEEEETTEE--CCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEE---EE
T ss_pred EEEecCCCEEEEEee-ccCCCCeEEEEECCeE--cCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccccccc---eE
Confidence 467789999999999 7889999999999976 33445555544 44699999999999999999999876543 34
Q ss_pred eeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeC--CcccCCCc-----eee----ecceE
Q psy14896 657 FPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR--GSPLPRNA-----YFE----NFNRI 725 (813)
Q Consensus 657 ~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~--g~~l~~~~-----~~~----~~~~~ 725 (813)
+.|.|..+|.+... + ...+.+|+.++|.|.+.|.|.|.++|+|+ +..+.... ++. .....
T Consensus 88 ~~l~V~~~p~~~~~--~-------~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (192)
T 2va4_A 88 AFLQVFVQPHIIQL--K-------NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSS 158 (192)
T ss_dssp EEEEEEEEEEEEEE--C-------CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEE
T ss_pred EEEEEEccCccccc--C-------cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceE
Confidence 67888777765432 1 13566799999999999999999999999 55554321 121 22468
Q ss_pred EEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEE
Q psy14896 726 LTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 759 (813)
Q Consensus 726 L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 759 (813)
|.|.+++.+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 159 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 159 LHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 9999999999999999999999999999999884
No 146
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.89 E-value=1.1e-22 Score=197.90 Aligned_cols=194 Identities=25% Similarity=0.449 Sum_probs=146.0
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcC----C
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIND----P 263 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~----~ 263 (813)
.||.|+..|.+..+.+| +++.|.|.+.|.|.+.+.|||+|..+.... ......+....++.+.+.. .
T Consensus 8 ~pp~i~~~p~~~~v~~G-----~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~i~~ 78 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKG-----EPATLNCKAEGRPTPTIEWYKGGERVETDK----DDPRSHRMLLPSGSLFFLRIVHGR 78 (212)
T ss_dssp EEEEEEECCCCEEECTT-----CCEEECCEEEEESCCEEEEEETTEECCCTT----TCTTCSEEECTTSCEEESSCCCCS
T ss_pred CCcceecCCCceEEeCC-----CcEEEEEEcCCCCCCEEEEEECCEEeeccc----cccccceEEecCCcEEEEEEEecC
Confidence 36899999999988887 669999999999999999999998764221 0111223444566655443 2
Q ss_pred ccccCCeeEEEEeecCceeeEeeeeEEeeeeecc-cccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCC
Q psy14896 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE-FNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEED 342 (813)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~-~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~ 342 (813)
++.+|+|.|+|.|.|..|...+..+.|.|...++ +...+....+..|+.++|.|.+..+.|.+.+.|++++..+.. ..
T Consensus 79 ~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~-~~ 157 (212)
T 2v9r_A 79 KSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDD-KD 157 (212)
T ss_dssp SCCCSCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECT-TS
T ss_pred CCcccCeEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCC-Cc
Confidence 4789999999999999998767788888877554 444456677889999999999768889999999999987532 22
Q ss_pred ccEEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcc
Q psy14896 343 KRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF 394 (813)
Q Consensus 343 ~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~ 394 (813)
.++. ..++.|.|.++..+|+|.|+|.|.|..|.. .+..+.|.|..+|.+
T Consensus 158 ~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~--~s~~~~l~V~~~P~~ 206 (212)
T 2v9r_A 158 ERIT-IRGGKLMITYTRKSDAGKYVCVGTNMVGER--ESEVAELTVLERPSF 206 (212)
T ss_dssp TTEE-EETTEEEESSCCGGGCEEEEEEEEETTEEE--ECCCEEEEEEC----
T ss_pred ceEE-ccCCeEEEeeCCHhhCeeEEEEEecccCce--ecceEEEEEEeCchH
Confidence 3333 356799999999999999999999988753 233478888876653
No 147
>1sb2_A Rhodocetin alpha subunit; C-type lectin, domain swapping, toxin; 1.90A {Calloselasma rhodostoma} SCOP: d.169.1.1 PDB: 3gpr_A
Probab=99.89 E-value=4.1e-23 Score=183.50 Aligned_cols=124 Identities=17% Similarity=0.272 Sum_probs=108.5
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCC--CCceEEEEe--ccCCCC
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP--QRRKWYFGG--TQQSPN 101 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~--~~~~w~g~~--~~~~~~ 101 (813)
.||.||..|+++||+++... ++|.+|+..|+. .||+||+|+|++|++||.+++..... ...+||||. +...++
T Consensus 1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~~ 79 (133)
T 1sb2_A 1 DCPDGWSSTKSYCYRPFKEK-KTWEEAERFCTEQEKEAHLVSMENRLEAVFVDMVMENNFENKIYRSWIGLKIENKGQRS 79 (133)
T ss_dssp CCCTTCEECSSEEEEEEEEE-ECHHHHHHHHHTSSSCCEECCCSSHHHHHHHHHHHHHHTTTCCEEEEEEEEEECSSTTS
T ss_pred CcCCCcEEcCCEeEEEECCc-CCHHHHHHHHhhhCCCcEEeeECCHHHHHHHHHHHHhhccCccCCEEEeeeccCCCCCC
Confidence 49999999999999999984 999999999999 89999999999999999999865433 468999999 887889
Q ss_pred CeEEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 102 LWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 102 ~~~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.|.|.||++++| .+|.. +| .++|+.|....+ ...|.+..|.....|+|+..
T Consensus 80 ~~~W~dg~~~~~-~~W~~-~P----~~~C~~~~~~~~--~~~w~~~~C~~~~~fICe~~ 130 (133)
T 1sb2_A 80 NLEWSDGSSISY-ENLYE-PY----MEKCFLMDHQSG--LPKWHTADCEEKNVFMCKFQ 130 (133)
T ss_dssp SEEETTCCCCCC-CCBSS-CC----CEEEEEEEESSS--SCEEEEECTTSCEEEEEEEE
T ss_pred ceEECCCCcccc-cccCc-CC----CCCcEEEEecCC--CCeEccCCCCCCceeEeccc
Confidence 999999999987 67777 87 579999977643 14556999999999999985
No 148
>2afp_A Protein (SEA raven type II antifreeze protein); recombinant SEA raven protein, solution backbone fold, C- type lectin; NMR {Hemitripterus americanus} SCOP: d.169.1.1
Probab=99.89 E-value=2.7e-24 Score=189.75 Aligned_cols=126 Identities=21% Similarity=0.366 Sum_probs=110.2
Q ss_pred ccCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeE
Q psy14896 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (813)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~ 104 (813)
.+..||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||.++ ....+||||.+...++.|.
T Consensus 3 ~~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~-----~~~~~WIGl~~~~~~~~~~ 76 (129)
T 2afp_A 3 AGPNCPAGWQPLGDRCIYYETTA-MTWALAETNCMKLGGHLASIHSQEEHSFIQTL-----NAGVVWIGGSACLQAGAWT 76 (129)
T ss_dssp CCCSSCSSSCCCSSSEECCCCSC-CCHHHHHHHHHHHSCEECCCSSSHHHHHHHHH-----CSSCBCCSCBCSSSSSCCB
T ss_pred ccCCCCcCcEEcCCEEEEEECCc-CCHHHHHHHHHHcCCEECCcCCHHHHHHHHhc-----CCCCEEEcccccCCCCceE
Confidence 35679999999999999999995 99999999999999999999999999999888 3457899999988889999
Q ss_pred EcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 105 NEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 105 W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|+||++++| .+|..++|++...++|+.|....+. .|.+..|.....|+|+..
T Consensus 77 W~dg~~~~~-~~W~~~~P~~~~~~~C~~~~~~~~~---~w~~~~C~~~~~~iCe~~ 128 (129)
T 2afp_A 77 WSDGTPMNF-RSWCSTKPDDVLAACCMQMTAAADQ---CWDDLPCPASHKSVCAMT 128 (129)
T ss_dssp SSSSCCCCC-CCSSSCCSCCSTTCCBCCBCCSSSS---CBCCBCSCCCCCCCEEEC
T ss_pred eCCCCcccc-CCcCCCccCCCCCCCCeEEccCCCC---EEeCCCCCCCcceEEeee
Confidence 999999987 6777779987656899999665432 455999999999999974
No 149
>2zib_A Type II antifreeze protein; thermal hysteresis, lectin; 1.34A {Brachyopsis rostratus}
Probab=99.89 E-value=4.1e-23 Score=182.34 Aligned_cols=125 Identities=18% Similarity=0.313 Sum_probs=110.2
Q ss_pred cCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEE
Q psy14896 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (813)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W 105 (813)
...++.+|..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||.+++. ..+||||.+...++.|.|
T Consensus 7 ~~~~~~~~~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~WIGl~~~~~~~~w~W 80 (133)
T 2zib_A 7 ALVCPAGWTLHGQRCFYSEATA-MTWDLAEANCVNKGGHLASIHSLEEQLYIKDIVA-----GIVWIGGSACKVAGAWSW 80 (133)
T ss_dssp CCCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTSEECCCCSHHHHHHHHHHCS-----SCEEEEEECCSSTTCCEE
T ss_pred eeeCCCCEEEeCCEEEEEECCc-cCHHHHHHHHHHCCCEECccCCHHHHHHHHHhhc-----cCEEEccEecCCCCceEE
Confidence 4458999999999999999985 9999999999999999999999999999999873 679999999888999999
Q ss_pred cCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 106 ~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
+||++++| .+|..++|++..+++|+.|....+. .|.+..|.....|+|++.
T Consensus 81 ~dG~~~~y-~~W~~g~P~~~~~~~Cv~~~~~~~~---~W~d~~C~~~~~fICe~~ 131 (133)
T 2zib_A 81 TDGTPVDY-RTWCPTKPNDILSDCCMQMTAAVDK---CWDDLPCPASHASICAKA 131 (133)
T ss_dssp TTCCCCCC-CCBCTTCCCCCTTSCEEEECSSTTC---CEEEECTTCCEEEEEEEE
T ss_pred CCCCCccc-CCcCCCCCCCCCCCCceEEecCCCC---cEeCCCCCCCeeEEEeEc
Confidence 99999987 6777779987656899999765432 466999999999999984
No 150
>2b6b_D CD209 antigen; cryo EM dengue CRD DC-SIGN, icosahedral virus, virus-recepto; 25.00A {Homo sapiens} SCOP: d.169.1.1
Probab=99.89 E-value=5.5e-23 Score=190.14 Aligned_cols=129 Identities=22% Similarity=0.360 Sum_probs=111.3
Q ss_pred ccccCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCC
Q psy14896 23 DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNL 102 (813)
Q Consensus 23 ~~~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~ 102 (813)
...+..||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||..++.. ....+||||.+...++.
T Consensus 21 ~~~~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~~--~~~~~WIGl~~~~~~~~ 97 (175)
T 2b6b_D 21 MRLCHPCPWEWTFFQGNCYFMSNSQ-RNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSR--SNRFTWMGLSDLNQEGT 97 (175)
T ss_pred ccccCCCCcCcEEeCCEEEEEECCc-cCHHHHHHHHhhCCCEEeeeCCHHHHHHHHHHhcc--CCCcEEEeeEccCCCCc
Confidence 3456789999999999999999985 99999999999999999999999999999987632 34679999999888999
Q ss_pred eEEcCCCCCCc--cccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 103 WVNEDGTNLNE--LDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 103 ~~W~dgs~~~~--~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|.|.||+++.+ +.+|..++|++...++|+.|... . |.+..|.....|+|++.
T Consensus 98 w~W~dGs~~~~~~~~~W~~geP~~~~~~~Cv~~~~~----g--W~d~~C~~~~~fICe~~ 151 (175)
T 2b6b_D 98 WQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN----G--WNDDKCNLAKFWICKKS 151 (175)
T ss_pred EEeCCCCCcccccccCCCCCCCCCCCCCCeeEEcCC----c--eEccCCCCCeeEEEEEC
Confidence 99999999984 34666669987767899998653 2 55999999999999995
No 151
>1ukm_A EMS16 A chain, EMS16 subunit A; domain swapping, C-type lectin, toxin; HET: NAG; 1.90A {Echis multisquamatus} SCOP: d.169.1.1 PDB: 1v7p_A*
Probab=99.89 E-value=2.7e-23 Score=184.89 Aligned_cols=125 Identities=15% Similarity=0.224 Sum_probs=107.4
Q ss_pred CCCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCC-CC-ceEEEEecc--CCC
Q psy14896 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP-QR-RKWYFGGTQ--QSP 100 (813)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~-~~-~~w~g~~~~--~~~ 100 (813)
..||.||..|+++||+|+.. .++|.+|+..|+. .||+||+|+|++|++||.+++..... .. .+||||.+. ..+
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~ 80 (134)
T 1ukm_A 2 FDCPSDWTAYDQHCYLAIGE-PQNWYEAERFCTEQAKDGHLVSIQSREEGNFVAQLVSGFMHRSEIYVWIGLRDRREEQQ 80 (134)
T ss_dssp -CCSTTCEEETTEEEEEEEE-EECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHTGGGGGSSCCEEEEEEEECCSSSC
T ss_pred cCCCCccEecCCEEEEEECC-CcCHHHHHHHHhhcCCCcEECccCCHHHHHHHHHHHhhhccCCCCCEEEeeecCCCCCC
Confidence 36999999999999999998 4999999999999 89999999999999999999854322 25 799999998 778
Q ss_pred CCeEEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 101 NLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 101 ~~~~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
+.|.|.||+++.| .+|..++|+ +|+.|....+ ...|.+..|.....|+|+..
T Consensus 81 ~~~~W~dg~~~~~-~~W~~g~P~-----~C~~~~~~~~--~~~W~~~~C~~~~~~ICe~~ 132 (134)
T 1ukm_A 81 CNPEWNDGSKIIY-VNWKEGESK-----MCQGLTKWTN--FHDWNNINCEDLYPFVCKFS 132 (134)
T ss_dssp SCCBCTTSCBCCC-CCBCTTCCC-----CEEEEEGGGT--SCSEEEECTTSCEEEEEEEE
T ss_pred CceEEcCcCcccc-ceECCCcCc-----cceEEEecCC--CCeeecCCCCCCceeEEeEc
Confidence 9999999999987 677777886 8999976543 14556999999999999984
No 152
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.89 E-value=7e-23 Score=195.20 Aligned_cols=171 Identities=19% Similarity=0.294 Sum_probs=131.5
Q ss_pred cCCCceeccCCCceEEeCCCCCCCccEEEEcc-CCCCCcccCCCeEEEeeCc---cEEEEeecccCCeeEEEEEEeeecC
Q psy14896 574 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWAR-DYFPNFVEEDKRVFVSYDG---ALYFSALEQIDAGNYSCNVQSKVSD 649 (813)
Q Consensus 574 ~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k-~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~ 649 (813)
.+.+..+.+|+.++|.|.+ .+.|. .+.|+| ++.. +....++.+..++ +|.|.++..+|+|.|+|.|.|..|.
T Consensus 8 ~~~~~~v~~G~~v~L~C~~-~~~p~-~v~W~~~~~~~--~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~ 83 (189)
T 2v44_A 8 SLSKVELSVGESKFFTCTA-IGEPE-SIDWYNPQGEK--IISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQ 83 (189)
T ss_dssp SCSEEEEETTCCEEEEEEE-EECCS-EEEEECTTSCB--CCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSC
T ss_pred cCCceEEecCCcEEEEEEe-ecCCe-eEEEEeCCCCc--cCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCC
Confidence 3455677899999999999 67777 999999 6654 4455667666655 7999999999999999999998875
Q ss_pred ccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCC--Cce-eeecceEE
Q psy14896 650 TGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR--NAY-FENFNRIL 726 (813)
Q Consensus 650 ~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~--~~~-~~~~~~~L 726 (813)
.. ...+.|.|..+|.+... ..+..+.+|+.++|.|.+.|.|.|.++|+|+|..+.. +.+ ....++.|
T Consensus 84 ~~--~~~~~l~v~~~p~~~~~--------~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L 153 (189)
T 2v44_A 84 TQ--EATVVLEIYQKLTFREV--------VSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNL 153 (189)
T ss_dssp EE--EEEEEEEEECCCEEESC--------CCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCE
T ss_pred cE--EEEEEEEEecCCceeec--------CCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcE
Confidence 42 33567888877754321 2225678999999999999999999999999998752 222 23345689
Q ss_pred EECCCCCCCCEEEEEEEEcCCCceEEEEEEEE
Q psy14896 727 TIPNVKVEDQGEYICRASNDRSALESSVTISI 758 (813)
Q Consensus 727 ~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 758 (813)
.|.+++.+|+|.|+|.|.|..|.......+.|
T Consensus 154 ~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 154 QILNINKSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp EETTCCGGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEcCcccCeEEEEEEEccccCceeeeeEEE
Confidence 99999999999999999999987655444443
No 153
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=99.89 E-value=3.8e-23 Score=194.08 Aligned_cols=126 Identities=21% Similarity=0.249 Sum_probs=109.4
Q ss_pred CCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEc
Q psy14896 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (813)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~ 106 (813)
..||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|.+|++||.+++. ...+||||++...++.|.|+
T Consensus 47 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~WIGl~~~~~~~~w~W~ 121 (182)
T 3kqg_A 47 QVVSQGWKYFKGNFYYFSLIP-KTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAG----GLIYWIGLTKAGMEGDWSWV 121 (182)
T ss_dssp HHHTTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHT----TCCEEEEEEECSTTCCEEET
T ss_pred ccCCCCCEEeCCEEEEEECCC-CCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHhcC----CCcEEEEeEccCCCCceEeC
Confidence 359999999999999999985 9999999999999999999999999999998872 34799999999889999999
Q ss_pred CCCCCCc---cccccCCCCCCcc-cCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 107 DGTNLNE---LDAAFLPEPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 107 dgs~~~~---~~~~~~~~p~~~~-~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
||+++.+ +.+|..++|++.. .++|+.|.... ...|.+..|.....|+|++.
T Consensus 122 dG~~~~~~~~~~~W~~geP~~~~~~~~Cv~~~~~~---~~~W~d~~C~~~~~fICe~~ 176 (182)
T 3kqg_A 122 DDTPFNKVQSARFWIPGEPNNAGNNEHCGNIKAPS---LQAWNDAPCDKTFLFICKRP 176 (182)
T ss_dssp TCCCCCHHHHTTTBCTTCCCCTTSCCCEEEECSSS---SSCEEEECTTSCBEEEEEEE
T ss_pred CCCccccccccCCCCCCCCCCCCCCCCeeEEecCC---CCCEeCcCCCCCeeEEeccC
Confidence 9999983 3677777998754 58999986532 23556999999999999995
No 154
>1fvu_B Botrocetin beta chain; VON WILLBRAND factor modulator, C-type lectin, metal- binding, loop exchanged dimer, toxin; 1.80A {Bothrops jararaca} SCOP: d.169.1.1 PDB: 1ijk_C 1u0n_C 1u0o_B
Probab=99.89 E-value=1.3e-23 Score=184.21 Aligned_cols=122 Identities=20% Similarity=0.300 Sum_probs=103.5
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEE
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W 105 (813)
.||.||..|+++||+|+... ++|.+|+..|+. +||+||+|+|++|++||.+++........+||||.+...++.|.|
T Consensus 1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W 79 (125)
T 1fvu_B 1 DCPPDWSSYEGHCYRFFKEW-MHWDDAEEFCTEQQTGAHLVSFQSKEEADFVRSLTSEMLKGDVVWIGLSDVWNKCRFEW 79 (125)
T ss_dssp CCSTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHTTCTTSCTTCCEECSCCCCSTTSCEEE
T ss_pred CcCCccEEcCCEEEEEeCCC-CCHHHHHHHHhccCCCcEECccCCHHHHHHHHHHHHhcCCCCCEEEeeeecCCCCceEe
Confidence 49999999999999999984 999999999999 899999999999999999988543334689999999888899999
Q ss_pred cCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 106 ~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
+||++++| .+|..++|+ +|+.|....+ .|.+..|.....|+|+..
T Consensus 80 ~dg~~~~~-~~w~~~~P~-----~C~~~~~~~g----~w~~~~C~~~~~~iCe~~ 124 (125)
T 1fvu_B 80 TDGMEFDY-DDYYLIAEY-----ECVASKPTNN----KWWIIPCTRFKNFVCEFQ 124 (125)
T ss_dssp TTSCCCCC-----CCSCC-----EEEEEETTTT----EEEEEETTSCEEEEEEEC
T ss_pred cCCCccCc-cccCCCCCC-----CceEEECCCC----cEeCCcCCCCCcEEEeec
Confidence 99999987 677766886 8999876533 455999999999999974
No 155
>1umr_C Convulxin beta, CVX beta; lectin, C-type lectin, platelet, sugar-binding protein, activator, snake venom; 2.40A {Crotalus durissus terrificus} SCOP: d.169.1.1 PDB: 1uos_B
Probab=99.89 E-value=2.3e-23 Score=182.63 Aligned_cols=121 Identities=21% Similarity=0.344 Sum_probs=105.8
Q ss_pred CCCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeE
Q psy14896 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (813)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~ 104 (813)
..||.||..|+++||+|+... ++|.+|+..|+. +||+||+|+|++|++||.+++........+||||.+...++.|.
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~ 80 (125)
T 1umr_C 2 FCCPSHWSSYDRYCYKVFKQE-MTWADAEKFCTQQHTGSHLVSFHSTEEVDFVVKMTHQSLKSTFFWIGANNIWNKCNWQ 80 (125)
T ss_dssp CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHHTTCSSSEEECSCCCTTTSSCEE
T ss_pred CCCCCCCEEcCCEeEEEECCC-cCHHHHHHHHhccCCcceECccCCHHHHHHHHHHHHhcCCCCCEEEeeEeCCCCCeeE
Confidence 369999999999999999984 999999999999 89999999999999999999865433468999999988889999
Q ss_pred EcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 105 NEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 105 W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|+||++++| .+|. ++| +|+.|....+ .|.+..|.....|+|++.
T Consensus 81 W~dg~~~~~-~~W~-g~P------~C~~~~~~~g----~w~~~~C~~~~~fICe~~ 124 (125)
T 1umr_C 81 WSDGTKPEY-KEWH-EEF------ECLISRTFDN----QWLSAPCSDTYSFVCKFE 124 (125)
T ss_dssp ETTSCCCSS-CCBC-CCC------EEEEEESSCS----CEEEEETTSCEEEEEEEE
T ss_pred eCCcCccCc-ccCC-CCC------CcEEEECCCC----cEeCCCCCCCcceEEeec
Confidence 999999988 6777 776 8999876533 455999999999999974
No 156
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.89 E-value=5.9e-23 Score=199.79 Aligned_cols=169 Identities=17% Similarity=0.198 Sum_probs=128.3
Q ss_pred ccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCc---cEEEEeecccCCeeEEEEEEeeecCccccCcee
Q psy14896 581 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG---ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 657 (813)
Q Consensus 581 ~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~ 657 (813)
-.++++.|.|.+....|.+.|+|+|+|.++ ....++.+..++ +|.|.+++.+|+|.|+|.|.|..|... ..+
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i--~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~---~~~ 89 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAI--RYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQ---KTV 89 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEEC--CCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEE---EEE
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEc--cCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceE---EEE
Confidence 346677888888444578999999999764 344555554443 399999999999999999999776533 234
Q ss_pred eEEEcc--------------------CCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCc
Q psy14896 658 PLKVFP--------------------HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 717 (813)
Q Consensus 658 ~l~v~~--------------------~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~ 717 (813)
.|.|.. .|.... ..+....+.+|+.++|.|.+.|.|.|.|+|+|+|.++..+.
T Consensus 90 ~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~-------~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~ 162 (212)
T 2r15_A 90 DLSGQAYDEAYAEFQRLKQAAIAEKNRARVLG-------GLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTD 162 (212)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHSCEEEE-------BCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCS
T ss_pred EEEEeeccchhhhccccCcccccccCCCcccc-------cCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCC
Confidence 444432 111111 01222567899999999999999999999999999998766
Q ss_pred eeeec-----ceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcC
Q psy14896 718 YFENF-----NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 761 (813)
Q Consensus 718 ~~~~~-----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 761 (813)
++... ...|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..|
T Consensus 163 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 163 HCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp SEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 44322 348999999999999999999999999999999999754
No 157
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.89 E-value=1.1e-24 Score=229.23 Aligned_cols=200 Identities=13% Similarity=0.106 Sum_probs=155.7
Q ss_pred CCceEEEEEEcCceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEE
Q psy14896 541 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFV 620 (813)
Q Consensus 541 d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~ 620 (813)
+.|.|+|.+.+.... +.+.+-.+|.+...+....+.+|+.++|.|.+ .|.|.+.+.|++++....... .+...
T Consensus 136 ~~~~~~C~~~~~l~~-----l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~-~g~p~p~i~W~~~~~~~~~~~-~~~~~ 208 (347)
T 2ifg_A 136 PEQKLQCHGQGPLAH-----MPNASCGVPTLKVQVPNASVDVGDDVLLRCQV-EGRGLEQAGWILTELEQSATV-MKSGG 208 (347)
T ss_dssp GGGCCCCSSSSCSSC-----CCCTTCCCCEEEEECCSSCCBTTCCEEEEEEE-ECSSCCCCCEEESCCCSSEEE-CCCCC
T ss_pred cccCCCCCCChHHhc-----CCcccCCCCceeccCCceEEeCCCcEEEEEEE-ecCCCCEEEEEcCCceeeccc-cccee
Confidence 568999988773221 12222345566666667788999999999999 799999999999986532221 12223
Q ss_pred eeCccEEEEeecccCCe-eEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC
Q psy14896 621 SYDGALYFSALEQIDAG-NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY 699 (813)
Q Consensus 621 ~~~~~L~i~~~~~~d~G-~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~ 699 (813)
..+++|.|.+++.+|+| .|+|.|.|..|... ..+.|.|..+|.+ .. ..+.+|+.++|.|.+.|.
T Consensus 209 ~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~---~~~~l~V~~~P~i-~~-----------~~~~~g~~v~l~C~~~g~ 273 (347)
T 2ifg_A 209 LPSLGLTLANVTSDLNRKNVTCWAENDVGRAE---VSVQVNVSFPASV-QL-----------HTAVEMHHWCIPFSVDGQ 273 (347)
T ss_dssp SSEEEEEEESCCSTTTTCCEEECCEETTEECC---EEECCCCBEEEEE-EE-----------CCCEESSSEEEEEEEEEE
T ss_pred cccceEEEeeCChHHCCCeEEEEEEcCCCCEE---EEEEEEEcCCCee-ee-----------ccCccCceEEEEEEeeec
Confidence 45567999999999999 99999999987653 3467777777754 11 335679999999999999
Q ss_pred CCCeEEEEeCCcccCCCceee-----------ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCC
Q psy14896 700 PVPSYNWTRRGSPLPRNAYFE-----------NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 762 (813)
Q Consensus 700 P~p~i~W~k~g~~l~~~~~~~-----------~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 762 (813)
|.|.|+|+|+|..+..+.... ...++|+|.+++.+|+|.|+|+|.|..|.+++++.|.|.++|
T Consensus 274 P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 274 PAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp SCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred CCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 999999999999988654322 125679999999999999999999999999999999999887
No 158
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.89 E-value=2.5e-22 Score=191.27 Aligned_cols=169 Identities=20% Similarity=0.301 Sum_probs=137.8
Q ss_pred ceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEee-cccccccccccccccCCCccEEee-C---CeEEEcCCcc
Q psy14896 191 YFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFK-EDYVQDRLVANLIDPLSDKRFTLS-G---GNLIINDPRQ 265 (813)
Q Consensus 191 ~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~-~---~~l~i~~~~~ 265 (813)
.|+..|.+..+.+| +++.|.|.+.|.|. .+.||| +|..+. ...++.+. + .+|.|.+. +
T Consensus 4 ~~~~~~~~~~v~~G-----~~v~L~C~~~~~p~-~v~W~~~~~~~~~----------~~~~~~~~~~~~~~~L~i~~~-~ 66 (189)
T 2v44_A 4 QVTISLSKVELSVG-----ESKFFTCTAIGEPE-SIDWYNPQGEKII----------STQRVVVQKEGVRSRLTIYNA-N 66 (189)
T ss_dssp EEEESCSEEEEETT-----CCEEEEEEEEECCS-EEEEECTTSCBCC----------CCSSEEEEEETTEEEEEECSC-C
T ss_pred EEEecCCceEEecC-----CcEEEEEEeecCCe-eEEEEeCCCCccC----------CCceEEEECCCCeEEEEEccC-C
Confidence 35666778888777 66999999999887 999999 666542 22333332 2 26788775 8
Q ss_pred ccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccE
Q psy14896 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRV 345 (813)
Q Consensus 266 ~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~ 345 (813)
.+|+|.|+|.|.|..|...+..+.|.|..+|.+.....+..+.+|+.++|.|.+ .|.|.+.+.|+|++.++......++
T Consensus 67 ~~d~G~Y~C~~~~~~g~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~ 145 (189)
T 2v44_A 67 IEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDNRF 145 (189)
T ss_dssp GGGCEEEEEEEECTTSCEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEE-ECSSCCEEEEEEEC--CEECCCTTE
T ss_pred cccCeEEEEEEEeCCCCcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEE-CcCCCCcEEEEECCcEEeccCCCCE
Confidence 999999999999999887678889999888887777777888999999999996 5889999999999998765567788
Q ss_pred EEccCccEEEeeeeecCCeeeEEEEeeecccc
Q psy14896 346 FVSYDGALYFSALEQIDAGNYSCNVQSKVSDT 377 (813)
Q Consensus 346 ~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 377 (813)
....++.|.|.++..+|+|.|+|.|.|..+..
T Consensus 146 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~ 177 (189)
T 2v44_A 146 AMLANNNLQILNINKSDEGIYRCEGRVEARGE 177 (189)
T ss_dssp EECTTSCEEETTCCGGGCEEEEEEEEETTTTE
T ss_pred EEecCCcEEEEEcCcccCeEEEEEEEccccCc
Confidence 88888999999999999999999999987643
No 159
>1sl6_A C-type lectin DC-signr; sugar binding protein; HET: GAL NDG FUC; 2.25A {Homo sapiens} SCOP: d.169.1.1 PDB: 1xar_A
Probab=99.89 E-value=7e-23 Score=191.56 Aligned_cols=127 Identities=21% Similarity=0.387 Sum_probs=110.4
Q ss_pred ccCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeE
Q psy14896 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (813)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~ 104 (813)
.+..||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|.+|++||..++.. ....+||||++...++.|.
T Consensus 49 ~~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~~--~~~~~WIGl~~~~~~~~w~ 125 (184)
T 1sl6_A 49 LCRHCPKDWTFFQGNCYFMSNSQ-RNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSR--SNRFSWMGLSDLNQEGTWQ 125 (184)
T ss_dssp TCCBCCTTCEEETTEEEEECSSC-BCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHHH--TTCCEEEEEECCSSTTCCE
T ss_pred cCCCCCCCcEEECCEEEEEECCC-CCHHHHHHHHHhcCCEEEEeCCHHHHHHHHHHhcc--CCccEEEEEEccCCCCCeE
Confidence 45689999999999999999985 99999999999999999999999999999987643 3467999999988899999
Q ss_pred EcCCCCCCc--cccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 105 NEDGTNLNE--LDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 105 W~dgs~~~~--~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|+||+++.+ +.+|..++|++...++|+.|... . |.+..|.....|+|++.
T Consensus 126 W~DGs~~~~~~~~~W~~geP~~~~~~~Cv~~~~~----g--W~d~~C~~~~~fICe~~ 177 (184)
T 1sl6_A 126 WVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGS----G--WNDNRCDVDNYWICKKP 177 (184)
T ss_dssp ETTSCBCCGGGGGGBCTTCCCCTTSCCEEEEETT----E--EEEECTTSCBEEEEEEE
T ss_pred ecCCCccCCcccCCCCCCCCCCCCCCCceEEeCC----c--EEccCCCCCeeEEEeEC
Confidence 999999985 34666669987777899999652 2 55999999999999985
No 160
>1fvu_A Botrocetin alpha chain; VON WILLBRAND factor modulator, C-type lectin, metal- binding, loop exchanged dimer, toxin; 1.80A {Bothrops jararaca} SCOP: d.169.1.1 PDB: 1ijk_B 1u0n_B 1u0o_A
Probab=99.89 E-value=2.2e-23 Score=185.11 Aligned_cols=124 Identities=15% Similarity=0.271 Sum_probs=108.3
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHh-HHHHHHHHhhhcCC--CCceEEEEe--ccCCC
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDAD-EHGFIMYQLFWQDP--QRRKWYFGG--TQQSP 100 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~-e~~~i~~~~~~~~~--~~~~w~g~~--~~~~~ 100 (813)
.||.||..|+++||+|+... ++|.+|+..|+. .||+||+|++++ |++||.+++..... ...+||||. +...+
T Consensus 1 ~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~ 79 (133)
T 1fvu_A 1 DCPSGWSSYEGNCYKFFQQK-MNWADAERFCSEQAKGGHLVSIKIYSKEKDFVGDLVTKNIQSSDLYAWIGLRVENKEKQ 79 (133)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCTTSTHHHHHHHHHHHHCCSSCCEEEEEEEECCSSSS
T ss_pred CcCCCcEEcCCeeEEEECCC-cCHHHHHHHHhccCCCcEEeeecChHHHHHHHHHHHhhccccCCCCEEEeeecccCCCC
Confidence 49999999999999999984 999999999999 799999999999 99999999865443 468999999 88788
Q ss_pred CCeEEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 101 NLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 101 ~~~~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
+.|.|.||++++| .+|.. +|+ ++|+.|....+ ...|.+..|.....|+|++.
T Consensus 80 ~~w~W~dg~~~~~-~~W~~-~P~----~~C~~~~~~~~--~~~w~~~~C~~~~~fICe~~ 131 (133)
T 1fvu_A 80 CSSEWSDGSSVSY-ENVVE-RTV----KKCFALEKDLG--FVLWINLYCAQKNPFVCKSP 131 (133)
T ss_dssp SCCBCTTSCBCCC-CCBCG-GGC----CCEEEEETTTT--SCSEEEECTTCCEEEEEEEC
T ss_pred CccEeCCCCcccc-cCccc-CCC----CCcEEEEecCC--CCeEecCCCCCCCCEEeeec
Confidence 9999999999987 67777 776 89999976543 14556999999999999985
No 161
>1egg_A Macrophage mannose receptor; C-type lectin, sugar binding protein; 2.30A {Homo sapiens} SCOP: d.169.1.1 PDB: 1egi_A
Probab=99.89 E-value=3.7e-23 Score=187.35 Aligned_cols=129 Identities=16% Similarity=0.281 Sum_probs=106.8
Q ss_pred CCCchhh--hccCCeEEEEec----CCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCC-CCceEEEEeccCC
Q psy14896 27 LRCPQHW--VQYRDSCYRFVK----SPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDP-QRRKWYFGGTQQS 99 (813)
Q Consensus 27 ~~Cp~~w--~~~~~~Cy~~~~----~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~-~~~~w~g~~~~~~ 99 (813)
..||.|| ..|+++||+|+. . .++|.+|+..|+.+||+||+|++++|++||.+++..... ...+||||.+...
T Consensus 3 ~~Cp~gw~~~~~~~~CY~~~~~~~~~-~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~~ 81 (147)
T 1egg_A 3 PKCPEDWGASSRTSLCFKLYAKGKHE-KKTWFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKLFWLGLTYGSP 81 (147)
T ss_dssp --CCTTCEECSSSSCEEEEECSCGGG-CBCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHHHHTCTTCEEEEEEECC--
T ss_pred CCCCCCCccccCCCEEEEEeccCCcc-ccCHHHHHHHHHHcCCEECccCCHHHHHHHHHHHHhccCCCCcEEEeeecCCC
Confidence 4699999 999999999998 7 499999999999999999999999999999998865432 3689999999888
Q ss_pred CCCeEEcCCCCCCccccccCCCCCCc-ccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 100 PNLWVNEDGTNLNELDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 100 ~~~~~W~dgs~~~~~~~~~~~~p~~~-~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
++.|.|.||+++.| .+|..++|++. ..++|+.|..... ..|.+..|.....|+|+..
T Consensus 82 ~~~w~W~dg~~~~~-~~W~~g~P~~~~~~~~Cv~~~~~~~---~~W~d~~C~~~~~fICe~~ 139 (147)
T 1egg_A 82 SEGFTWSDGSPVSY-ENWAYGEPNNYQNVEYCGELKGDPT---MSWNDINCEHLNNWICQIQ 139 (147)
T ss_dssp --CCCCTTSCCCCC-CCCCTTCSCGGGSCCEEEEEECSTT---CCEEEEETTSCBEEEEECC
T ss_pred CCcEEecCCCCccc-CccCCCCCCCCCCCCCCeEECCCCC---CceeccCCCCCccEEeeCC
Confidence 89999999999988 67777799864 4689999976522 3455999999999999995
No 162
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.89 E-value=2.1e-22 Score=193.32 Aligned_cols=180 Identities=19% Similarity=0.281 Sum_probs=139.5
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEe---eCC--eEEEcC
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL---SGG--NLIIND 262 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~---~~~--~l~i~~ 262 (813)
.+|.|+..|.+..+.+| +++.|.|.+.|.|.+.+.|||+|..+. ..+.++.. .++ +|.|.+
T Consensus 3 ~~P~~~~~~~~~~v~~G-----~~v~l~C~~~~~p~~~v~W~~~~~~~~---------~~~~~~~~~~~~~~~~~L~i~~ 68 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQ-----SNATLVCKVTGHPKPIVKWYRQGKEII---------ADGLKYRIQEFKGGYHQLIIAS 68 (197)
T ss_dssp CCCEEEECCCCEEEETT-----SCEEEEEEEECSSCCEEEEEETTEECC---------CCSSSEEEEEETTTEEEEEECS
T ss_pred CCCEEEEcCCccEEcCC-----CEEEEEEEEeecCCCEEEEEECCEECc---------cCCCcEEEEEcCCCEEEEEECc
Confidence 47899999999998887 669999999999999999999998763 22233332 233 688877
Q ss_pred CccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCC-----CCceeecCCCeEEEecCCCCCCcceEEEeeccccc
Q psy14896 263 PRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR-----APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPN 337 (813)
Q Consensus 263 ~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~-----~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~ 337 (813)
. +.+|+|.|+|.|.|..|.. +..+.|.|..+|.+.... ....+.+|+.++|.|.+ .|.|.+.+.|+|++.++
T Consensus 69 ~-~~~d~G~Y~C~~~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~~~~~~~ 145 (197)
T 2j8h_A 69 V-TDDDATVYQVRATNQGGSV-SGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPF-SGKPDPVITWQKGQDLI 145 (197)
T ss_dssp C-CGGGCSEEEEEEEETTEEE-EEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEE-EEESCCEEEEEESSCEE
T ss_pred C-CHHhCEEEEEEEEECCCce-eEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEE-EecCCCcEEEEECCEEe
Confidence 5 8999999999999999886 778888888776654332 23456779999999996 68899999999999875
Q ss_pred cccCCccEEEcc---CccEEEee-eeecCCeeeEEEEeeeccccCCCCCceeeEEc
Q psy14896 338 FVEEDKRVFVSY---DGALYFSA-LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389 (813)
Q Consensus 338 ~~~~~~~~~~~~---~~~L~i~~-v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~ 389 (813)
. ...++.+.. .++|.|.+ +..+|+|.|+|.|.|..|.... .+.|.|.
T Consensus 146 ~--~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~---~~~l~V~ 196 (197)
T 2j8h_A 146 D--NNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQK---TVELDVA 196 (197)
T ss_dssp C--SSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEE---EEEEEEE
T ss_pred e--cCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeE---EEEEEEe
Confidence 4 334444332 34899999 9999999999999999886432 3666653
No 163
>1j34_B Coagulation factor IX-binding protein B chain; magnesium ION, calcium ION, GLA domain, protein binding/blood clotting complex; HET: CGU; 1.55A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1bj3_B 1ixx_B* 1j35_B* 1x2t_B* 1x2w_B 1wt9_B 1iod_B 1y17_B
Probab=99.89 E-value=1.9e-23 Score=182.58 Aligned_cols=120 Identities=19% Similarity=0.347 Sum_probs=104.9
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEE
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W 105 (813)
.||.||..|+++||+++... ++|.+|+..|+. +||+||+|+|++|++||.+++........+||||.+...++.|.|
T Consensus 1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W 79 (123)
T 1j34_B 1 DCPSDWSSYEGHCYKPFSEP-KNWADAENFCTQQHAGGHLVSFQSSEEADFVVKLAFQTFGHSIFWMGLSNVWNQCNWQW 79 (123)
T ss_dssp CCCTTSEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHHHHHCSCEEECSCCSCSTTSCEEE
T ss_pred CcCCcccccCCEEEEEECCC-cCHHHHHHHHhccCCCcEEcccCCHHHHHHHHHHHHhcCCCCCEEEeeEcCCCCCeeEe
Confidence 49999999999999999984 999999999999 899999999999999999988543224689999999888899999
Q ss_pred cCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 106 ~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
+||++++| .+|. ++| +|+.|....+ . |.+..|.....|+|++.
T Consensus 80 ~dg~~~~~-~~W~-g~P------~C~~~~~~~g--~--w~~~~C~~~~~~iCe~~ 122 (123)
T 1j34_B 80 SNAAMLRY-KAWA-EES------YCVYFKSTNN--K--WRSRACRMMAQFVCEFQ 122 (123)
T ss_dssp TTCCCCCC-CCBS-CSC------EEEEEETTSC--C--BEEEETTSCEEEEEEEE
T ss_pred CCCCCcCc-cCcC-CCC------CcEEEECCCC--C--CcCCCCCCCCcEEEeec
Confidence 99999987 6777 776 8999876543 4 45999999999999974
No 164
>2vuv_A Codakine; sugar-binding protein, C-type, lectin, mannose, invertebrate; HET: CIT; 1.3A {Codakia orbicularis} PDB: 2vuz_A*
Probab=99.89 E-value=3.7e-23 Score=182.33 Aligned_cols=123 Identities=20% Similarity=0.369 Sum_probs=106.7
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCce--EEEEeccCCCCCeEE
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRK--WYFGGTQQSPNLWVN 105 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~--w~g~~~~~~~~~~~W 105 (813)
.||.||..|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||.+++........+ ||| +...++.|.|
T Consensus 1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WiG--~~~~~~~~~W 77 (129)
T 2vuv_A 1 GCPDGWTQFLDLCYIYQSAK-ASWASAQSSCQALGGILAEPDTACENEVLIHMCKENGDAGSFGPWLG--GQKVGGAWQW 77 (129)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTSEECCCCSHHHHHHHHHHHHHTTCCSSSCCEEE--EEEETTEEEE
T ss_pred CCCcchhhhCCEEEEEECCC-cCHHHHHHHHHhcCCEECccCCHHHHHHHHHHHHhccCCCCcccccC--CCCCCCeEEE
Confidence 49999999999999999984 999999999999999999999999999999998654334567 999 5667889999
Q ss_pred cC-CCCCCccccccCCCCCCc-ccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 106 ED-GTNLNELDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 106 ~d-gs~~~~~~~~~~~~p~~~-~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.| |++++| .+|..++|++. +.++|+.|.... |.+..|.....|+|++.
T Consensus 78 ~d~g~~~~~-~~W~~~~P~~~~~~~~C~~~~~~~------w~~~~C~~~~~~ICe~~ 127 (129)
T 2vuv_A 78 SSSGAAFDY-LRWGPNEPNNSGGNEDCLHYNWLS------WNDLRCHYQASYLCQRA 127 (129)
T ss_dssp TTTCCBCSS-CCBCTTCSCCTTSCCCEEEEETTE------EEEECTTSCEEEEEEEE
T ss_pred cCCCCcccc-CCcCCCCCCCCCCCCCccEEcCCc------ccCCCCCCCcceEeeec
Confidence 99 999987 67777799874 478999996642 66999999999999984
No 165
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.89 E-value=8.6e-23 Score=201.63 Aligned_cols=184 Identities=18% Similarity=0.254 Sum_probs=138.3
Q ss_pred CCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCC--eEEEeeCccEEEEeecccCCeeEEEEEEeeecCcccc
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK--RVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRN 653 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~--~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 653 (813)
....+.+|+.++|.|.+ .+.|.+.|+|+|++.++...... ......+++|.|.+++.+|+|.|+|.|.|..|...
T Consensus 27 ~~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~-- 103 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPA-GGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSIN-- 103 (231)
T ss_dssp SCEEEETTSCEEEECCE-EEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEE--
T ss_pred eeEEEccCCCEEEEEec-ccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCccc--
Confidence 56678899999999999 68899999999999764332221 13334455799999999999999999999887543
Q ss_pred CceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEe----CCcccCCCcee----------
Q psy14896 654 GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR----RGSPLPRNAYF---------- 719 (813)
Q Consensus 654 ~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k----~g~~l~~~~~~---------- 719 (813)
..+.|.|...+........ .......+.+|+.++|.|.+.|.|.|.++|+| +|..+..+...
T Consensus 104 -~~~~l~V~~~~~~~p~~~~---~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~ 179 (231)
T 3ojm_B 104 -HTYHLDVVERSRHRPILQA---GLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGI 179 (231)
T ss_dssp -EEEEEEEECCCCCCCEECT---TCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECST
T ss_pred -ccEEEEEEcCCCCCCceee---ccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEeccccc
Confidence 3467777765432211110 11223567899999999999999999999999 88777544311
Q ss_pred -eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCcccc
Q psy14896 720 -ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 766 (813)
Q Consensus 720 -~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~~~ 766 (813)
....++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|..+.
T Consensus 180 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p~ 227 (231)
T 3ojm_B 180 NSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAPG 227 (231)
T ss_dssp TCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC----
T ss_pred ccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCCc
Confidence 12245799999999999999999999999999999999999887653
No 166
>3ubu_B Agglucetin subunit beta-2; platelet inhibiting, agkisacucetin, dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding; 1.91A {Deinagkistrodon acutus}
Probab=99.89 E-value=5.1e-23 Score=180.88 Aligned_cols=122 Identities=21% Similarity=0.292 Sum_probs=105.7
Q ss_pred CCCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeE
Q psy14896 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (813)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~ 104 (813)
..||.||..|+++||+++.. .++|.+|+..|+. +||+||+|+|++|++||..++........+||||.+...++.|.
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~-~~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~ 80 (126)
T 3ubu_B 2 FCCPLRWSAYEGHCYLVVKE-KKTWDDAEKFCTEQRKGGHLVSVHSREEADFLVHLAYPILDLSLIWMGLSNMWNDCKRE 80 (126)
T ss_dssp CSCCTTCEEETTEEEEEEEE-EECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHHCSCEEEEEEECTTTSSEEE
T ss_pred CCCCCCCeEcCCEeEEEeCC-CCCHHHHHHHHhccCCCcEECccCCHHHHHHHHHHHhhccCCCcEEEeEEcCCCCCceE
Confidence 36999999999999999998 4999999999999 99999999999999999999865433458999999988889999
Q ss_pred EcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 105 NEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 105 W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|+||++++| .+|.. .++|+.|....+ ..|.+..|.....|+|+++
T Consensus 81 W~dg~~~~~-~~W~~-------~~~Cv~~~~~~~---~~W~~~~C~~~~~fICe~~ 125 (126)
T 3ubu_B 81 WSDGTKLDF-KSWAK-------TSDCLIGKTDGD---NQWLNMDCSKKHYFVCKFK 125 (126)
T ss_dssp ETTCCCCCC-CCBCC-------CCCEEEEESSTT---CCEEEECTTSCEEEEEEEE
T ss_pred ecCCCeeee-eccCC-------CCCeEEEecCCC---CcCcCCCCCCCceeEEeee
Confidence 999999987 56533 579999976543 3455999999999999984
No 167
>3bdw_A Natural killer cells antigen CD94; NK cells, receptor, glycoprotein, lectin, signal-A transmembrane, immune system receptor; 2.50A {Homo sapiens} SCOP: d.169.1.1 PDB: 3cdg_J 1b6e_A 3cii_G
Probab=99.89 E-value=1.2e-23 Score=183.57 Aligned_cols=120 Identities=23% Similarity=0.379 Sum_probs=103.7
Q ss_pred cCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEE
Q psy14896 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (813)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W 105 (813)
+..||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||.++ ...+||||.+...++.|.|
T Consensus 2 c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~------~~~~WIGl~~~~~~~~w~W 74 (123)
T 3bdw_A 2 CCSCQEKWVGYRCNCYFISSEQ-KTWNESRHLCASQKSSLLQLQNTDELDFMSSS------QQFYWIGLSYSEEHTAWLW 74 (123)
T ss_dssp CCCCTTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCSCGGGGGGGTTC------CCCEECSEEEETTTTEEEE
T ss_pred CCCCCCCceEECCEEEEEeCCC-CCHHHHHHHHHHCCCeeEEECCHHHHHHHHhC------cCCEEeeeecCCCCCcEEe
Confidence 5679999999999999999995 99999999999999999999999999999764 4579999999988999999
Q ss_pred cCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 106 ~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.||+++.+ .+|...+|. ..++|+.|... ..|.+..|.....|+|+..
T Consensus 75 ~dg~~~~~-~~w~~~~~~--~~~~C~~~~~~-----~~w~d~~C~~~~~fICe~~ 121 (123)
T 3bdw_A 75 ENGSALSQ-YLFPSFETF--NTKNCIAYNPN-----GNALDESCEDKNRYICKQQ 121 (123)
T ss_dssp TTSCBCCT-TTSGGGGGC--CTTSEEEEETT-----TEEEEECTTSCBEEEEEEC
T ss_pred eCCCcCCc-ccccccCCC--CCCCCcEEcCC-----CcEEccCCCCCCeeeEeEe
Confidence 99999997 466555654 36899998642 2355999999999999984
No 168
>1c3a_B Flavocetin-A: beta subunit; C-type lectin-like domains, membrane protein; 2.50A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1v4l_B
Probab=99.89 E-value=2.2e-23 Score=182.69 Aligned_cols=121 Identities=18% Similarity=0.282 Sum_probs=105.4
Q ss_pred CCCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeE
Q psy14896 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (813)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~ 104 (813)
..||.||..|+++||+|+.. .++|.+|+..|+. +||+||+|+|++|++||.+++........+||||.+...++.|.
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~ 80 (125)
T 1c3a_B 2 FCCPLGWSSYDEHCYQVFQQ-KMNWEDAEKFCTQQHKGSHLVSFHSSEEVDFVTSKTFPILKYDFVWIGLSNVWNECTKE 80 (125)
T ss_dssp CCCCTTCEEETTEEEEEEEE-EECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHHHHHCSCEEECSCCCTTTSSCEE
T ss_pred CCCCCcceecCCEEEEEECC-CCCHHHHHHHhhccCCCcEECccCCHHHHHHHHHHHHhcCCCCCEEEeeEcCCCCCceE
Confidence 36999999999999999998 4999999999999 89999999999999999998854323468999999988889999
Q ss_pred EcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 105 NEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 105 W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|.||++++| .+|. ++| +|+.|....+ .|.+..|.....|+|++.
T Consensus 81 W~dg~~~~~-~~w~-~~P------~C~~~~~~~g----~w~~~~C~~~~~fiCe~~ 124 (125)
T 1c3a_B 81 WSDGTKLDY-KAWS-GGS------DCIVSKTTDN----QWLSMDCSSKYYVVCKFQ 124 (125)
T ss_dssp ETTCCCCCS-CCBC-CCC------EEEEEESSSS----CEEEEETTSCEEEEEEEE
T ss_pred eCCCCcccc-cccC-CCC------CcEEEECCCC----CEeCCCCCCCCeeEEeee
Confidence 999999987 6777 776 8999876543 445999999999999974
No 169
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.89 E-value=1e-22 Score=198.33 Aligned_cols=174 Identities=17% Similarity=0.285 Sum_probs=134.4
Q ss_pred CceeccCCCceEEeCCCCCCC----ccEEEEccCCCCC--------------cc-----cCCCeEEEee------CccEE
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYP----GVNYYWARDYFPN--------------FV-----EEDKRVFVSY------DGALY 627 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p----~~~v~W~k~~~~~--------------~~-----~~~~~~~~~~------~~~L~ 627 (813)
...+.+|+.++|.|.+ .+.| .+.|.|+|++... .. ....|+.+.. +++|.
T Consensus 9 ~v~v~~G~~v~L~C~~-~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 9 RIEKAKGETAYLPCKF-TLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEETTSCEEECCBC-CCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred eEEEecCCCEEEEEEE-ecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 4567889999999999 5555 4699999843211 01 1134555543 46799
Q ss_pred EEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEe-cCCCCCeEEE
Q psy14896 628 FSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-FGYPVPSYNW 706 (813)
Q Consensus 628 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~-~g~P~p~i~W 706 (813)
|.+++.+|+|.|+|.|.|..|.. ...+.|.|..+|...... ....+.+|+.++|.|.+ .|.|.|.|+|
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~~~---~~~~~l~V~~~p~~~~~~--------~~~~~~~g~~v~l~C~~~~g~p~~~v~W 156 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPGVA---NKKFLLTVLVKPSGTRCF--------VDGSEEIGNDFKLKCEPKEGSLPLQFEW 156 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEE---EEEEEEEEECCCBSCEEE--------EESCCBTTCCEEEEEECSBCCSSCEEEE
T ss_pred EccCChhhCeEEEEEEEeCCCcc---ccEEEEEEEcCCCCceee--------eecceecCCcEEEEecCCCCCCCCEEEE
Confidence 99999999999999999987654 345788898887654431 11347899999999999 7999999999
Q ss_pred EeCC--cccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCC
Q psy14896 707 TRRG--SPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 762 (813)
Q Consensus 707 ~k~g--~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 762 (813)
+|++ ..+.........+..|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P~ 214 (214)
T 3jz7_A 157 QKLSDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPS 214 (214)
T ss_dssp EECSTTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCCC
T ss_pred EECCCCCccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCCC
Confidence 9954 4444444444456799999999999999999999999999999999998665
No 170
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.89 E-value=3e-22 Score=191.84 Aligned_cols=185 Identities=16% Similarity=0.215 Sum_probs=141.5
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeec-cCCCCeEEEeecccccccccc--cccccCCCc-cEEeeCCeEEEcCCc
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAG-GYPNPSYEWFKEDYVQDRLVA--NLIDPLSDK-RFTLSGGNLIINDPR 264 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~-g~P~p~v~W~k~g~~l~~~~~--~~~~~~~~~-~~~~~~~~l~i~~~~ 264 (813)
+|.|+..|.+..+.+| +++.|.|.+. |.|.+.|.|+|+|..+..... ..+....+. .....+++|.|.+.
T Consensus 2 ~~~~~~~p~~~~v~~G-----~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~- 75 (195)
T 2c5d_C 2 ESPFVGNPGNITGARG-----LTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSL- 75 (195)
T ss_dssp CCSEEECCCCEEECTT-----CCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSC-
T ss_pred CCeeccChhheEEecC-----CcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEec-
Confidence 6889999999999888 6699999999 999999999999987643210 001000000 00001356888875
Q ss_pred cccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEEeeccccccccCCc
Q psy14896 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPNFVEEDK 343 (813)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~k~~~~~~~~~~~ 343 (813)
+.+|+|.|+|.|.|..|...+..+.|.|..+|.+...+....+.+|+.++|.|.+ .|.|.+ ++.|+|++.++......
T Consensus 76 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~~v~W~~~~~~~~~~~~~ 154 (195)
T 2c5d_C 76 QLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQA-QGPPEPVDLLWLQDAVPLATAPGH 154 (195)
T ss_dssp CSTTCEEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEE-ECSSCCCEEEEEESSCBSSSSTTS
T ss_pred cccCCcEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeEC-CCCCCCCEEEEEECCEeccCCCCc
Confidence 8999999999999998887677799999888877777777788899999999996 778999 99999999885433221
Q ss_pred cEEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEE
Q psy14896 344 RVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388 (813)
Q Consensus 344 ~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v 388 (813)
..++.|.|.+++ |+|.|+|.|.|..|... +..+.|.|
T Consensus 155 ----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~--s~~~~l~V 191 (195)
T 2c5d_C 155 ----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTT--SRTATITV 191 (195)
T ss_dssp ----SCCEEEEECCCS--SCEEEEEEEEETTEEEE--CCCEEEEE
T ss_pred ----CCCCeEEEcccc--cCceEEEEEEcCCCceE--EEEEEEEE
Confidence 456689999987 89999999999987542 23477777
No 171
>1c3a_A Flavocetin-A: alpha subunit; C-type lectin-like domains, membrane protein; 2.50A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1v4l_A
Probab=99.89 E-value=4.3e-23 Score=183.80 Aligned_cols=125 Identities=16% Similarity=0.199 Sum_probs=107.4
Q ss_pred CCCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCC-CC-ceEEEEe--ccCCC
Q psy14896 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP-QR-RKWYFGG--TQQSP 100 (813)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~-~~-~~w~g~~--~~~~~ 100 (813)
..||.||..|+++||+|+... ++|.+|+..|+. +||+||+|+|++|++||.+++..... .. .+||||. +...+
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~ 80 (135)
T 1c3a_A 2 FDCIPGWSAYDRYCYQAFSKP-KNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKIKTSFQYVWIGLRIQNKEQQ 80 (135)
T ss_dssp CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHCCSCCSEEEEEEEECCCSSS
T ss_pred cCCCCcCEecCCeeEEEeCCC-cCHHHHHHHHhhcCCCCEECeeCCHHHHHHHHHHHhhccccCCCcEEecccccCCCCC
Confidence 369999999999999999984 999999999999 99999999999999999999865432 24 7999999 88788
Q ss_pred CCeEEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 101 NLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 101 ~~~~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
+.|.|.||++++| .+|..++|+ +|+.|....+ ...|.+..|.....|+|+..
T Consensus 81 ~~~~W~dg~~~~~-~~W~~~~P~-----~C~~~~~~~~--~~~W~d~~C~~~~~fICe~~ 132 (135)
T 1c3a_A 81 CRSEWSDASSVNY-ENLVKQFSK-----KCYALKKGTE--LRTWFNVYCGTENPEVCKYT 132 (135)
T ss_dssp CCCBCTTSCBCCC-CCBCGGGCC-----CEEEEETTSC--SCSBEEECTTSCEEEEEEEC
T ss_pred CceEECCCCcccc-cccCCCCCC-----cceEEeccCC--CCeEccCCCCCCccEEcccC
Confidence 9999999999987 677666876 8999976543 13455999999999999984
No 172
>1jwi_A Bitiscetin; domain swapping, C-type lectin, toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB: 1uex_A
Probab=99.89 E-value=3.6e-23 Score=183.21 Aligned_cols=122 Identities=19% Similarity=0.310 Sum_probs=103.2
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCC-C-ceEEEEe--ccCCCCCe
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQ-R-RKWYFGG--TQQSPNLW 103 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~-~-~~w~g~~--~~~~~~~~ 103 (813)
.||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||.+++...... . .+||||. +...++.|
T Consensus 3 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~~~~ 81 (131)
T 1jwi_A 3 GCLPDWSSYKGHCYKVFKKV-GTWEDAEKFCVENSGHLASIDSKEEADFVTKLASQTLTKFVYDAWIGLRDESKTQQCSP 81 (131)
T ss_dssp -CCTTSEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHC--CCSCEEEEEEECCSSSSSCS
T ss_pred CCCCCCEEeCCEeEEEECCC-cCHHHHHHHHHHcCCeECccCCHHHHHHHHHHHhhcccccCccEEEeeeecCCCCCCce
Confidence 59999999999999999984 999999999999999999999999999999988554222 4 7999999 88788999
Q ss_pred EEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 104 VNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 104 ~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.|.||++++| .+|. +|+ +|+.|....+ ...|.+..|.....|+|+..
T Consensus 82 ~W~dg~~~~~-~~W~--~P~-----~C~~~~~~~~--~~~w~~~~C~~~~~fICe~~ 128 (131)
T 1jwi_A 82 QWTDGSSVVY-ENVD--EPT-----KCFGLDVHTE--YRTWTDLPCGEKNPFICKSR 128 (131)
T ss_dssp BCTTSCBCCS-CCBS--SCC-----CEEEECGGGT--TSSEEEECTTSCEEEEEEC-
T ss_pred EEeCcCcccC-cCCC--CCC-----CceEEecCCC--CCeEcCcCCCCCcceeeCcC
Confidence 9999999987 5655 775 8999866542 14456999999999999985
No 173
>1hq8_A NKG2-D; homodimer, CIS-proline, apoptosis; 1.95A {Mus musculus} SCOP: d.169.1.1 PDB: 1jsk_A 1kcg_A*
Probab=99.89 E-value=1.6e-23 Score=182.48 Aligned_cols=120 Identities=23% Similarity=0.412 Sum_probs=104.2
Q ss_pred ccCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeE
Q psy14896 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (813)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~ 104 (813)
.+..||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||..+ ...+||||.+...++.|.
T Consensus 2 ~c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~fl~~~------~~~~WIGl~~~~~~~~w~ 74 (123)
T 1hq8_A 2 YCGPCPNNWICHRNNCYQFFNEE-KTWNQSQASCLSQNSSLLKIYSKEEQDFLKLV------KSYHWMGLVQIPANGSWQ 74 (123)
T ss_dssp CCCCCSTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTTCEECCCSCTTTTGGGGGC------CSCEEEEEEECTTTCCEE
T ss_pred cCCCCCcccEEcCCEEEEEeCCc-cCHHHHHHHHHhcCCEecccCCHHHHHHHHhc------cCCEEEEeeecCCCCCeE
Confidence 35689999999999999999984 99999999999999999999999999999754 257899999988899999
Q ss_pred EcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 105 NEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 105 W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|.||+++.| .+|..++|+ .++|+.|... ..|.+..|.....|+|++.
T Consensus 75 W~dg~~~~~-~~w~~~~p~---~~~C~~~~~~-----~~w~~~~C~~~~~fICe~~ 121 (123)
T 1hq8_A 75 WEDGSSLSY-NQLTLVEIP---KGSCAVYGSS-----FKAYTEDCANLNTYICMKR 121 (123)
T ss_dssp ETTSCBCCT-TTCEEECCT---TCCEEEECST-----TEEEEECTTSCEEEEEEEC
T ss_pred eCCCCCccc-cccccCCCC---CCCcEEEecc-----CCEeccCCCCCceeEeeee
Confidence 999999997 566666886 4789998543 2455999999999999984
No 174
>2h2t_B Low affinity immunoglobulin epsilon FC receptor ( IGE receptor) (FC-epsilon-RII)...; C-type lectin, calcium-bound, lectin domain; 1.30A {Homo sapiens} PDB: 2h2r_A 1t8c_A 1t8d_A
Probab=99.89 E-value=4.2e-23 Score=191.72 Aligned_cols=125 Identities=17% Similarity=0.374 Sum_probs=106.4
Q ss_pred ccCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeE
Q psy14896 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (813)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~ 104 (813)
.+..||.||..|+++||+|+.. .++|.+|+.+|+.+||+||+|++++|++||.+++. ...+||||.+...++.|.
T Consensus 13 ~~~~Cp~gw~~~~~~CY~~~~~-~~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~----~~~~WIGl~~~~~~~~w~ 87 (175)
T 2h2t_B 13 VCNTCPEKWINFQRKCYYFGKG-TKQWVHARYACDDMEGQLVSIHSPEEQDFLTKRAS----HTGSWIGLRNLDLKGEFI 87 (175)
T ss_dssp -CCBCCTTCEEETTEEEEEEEE-EECHHHHHHHHHHTTCEECCCCSHHHHHHHHTTCC----TTCEEEEEEEETTTTEEE
T ss_pred cCCCCCcccEEeCCEEEEEeCC-ccCHHHHHHHHhhcCCEEeecCCHHHHHHHHHHhc----CCcEEecceecCCCCCeE
Confidence 4567999999999999999998 49999999999999999999999999999998863 357999999988889999
Q ss_pred EcCCCCCCccccccCCCCCCc-ccCCeEEEEeeccccccceeeccCCCce-eeeeeec
Q psy14896 105 NEDGTNLNELDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPL-LFICEAS 160 (813)
Q Consensus 105 W~dgs~~~~~~~~~~~~p~~~-~~~~c~~~~~~~~~~~l~i~~~~~~d~~-~y~C~~~ 160 (813)
|.||+++.| .+|..++|++. ..++|+.|.. ...|.+..|.... .|+|++.
T Consensus 88 W~dG~~~~y-~~W~~geP~~~~~~~~Cv~~~~-----~g~W~d~~C~~~~~~fICe~~ 139 (175)
T 2h2t_B 88 WVDGSHVDY-SNWAPGEPTSRSQSEDCVMMRG-----SGRWNDAFCDRKLGAWVCDRL 139 (175)
T ss_dssp ETTSCCCSS-CCBCTTCCCC-----CEEEECT-----TSCEEEECTTCCEEEEEEEEE
T ss_pred eCCCCcccC-cCcCCCCCCCCCCCCCceEEcC-----CCcEEECCCCCcCcceEEeEC
Confidence 999999988 67777799874 4689999853 1245599999999 9999995
No 175
>1oz7_A Echicetin A-chain; platelet aggregation, dimer, toxin; 2.40A {Echis carinatus} SCOP: d.169.1.1
Probab=99.89 E-value=4.7e-23 Score=182.45 Aligned_cols=123 Identities=15% Similarity=0.227 Sum_probs=106.9
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCC-CCceEEEEeccC--CCCC
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP-QRRKWYFGGTQQ--SPNL 102 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~-~~~~w~g~~~~~--~~~~ 102 (813)
.||.||..|+++||+|+... ++|.+|+..|+. .||+||+|++++|++||.+++..... ...+||||.+.. .++.
T Consensus 1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~~~~~~~ 79 (131)
T 1oz7_A 1 MCPPGWSSNGVYCYMLFKEP-KTWDEAEKFCNKQGKDGHLLSIESKKEEILVDIVVSENIGKMYKIWTGLSERSKEQHCS 79 (131)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHSCCCSEEEEEEEECCCGGGSC
T ss_pred CcCCCcEEeCCEEEEEECCC-CCHHHHHHHHHhcCCCCEECccCCHHHHHHHHHHHHhhcCCCCCEEEeeeCCCCCCCCc
Confidence 49999999999999999984 999999999999 89999999999999999999865432 468999999988 7899
Q ss_pred eEEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 103 WVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 103 ~~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|.|.||++++| .+|.. +|+ +|+.|....+ ...|.+..|.....|+|++.
T Consensus 80 ~~W~dg~~~~~-~~W~~-~P~-----~Cv~~~~~~~--~~~w~~~~C~~~~~fICe~~ 128 (131)
T 1oz7_A 80 SRWSDGSFFRS-YEIAI-RYS-----ECFVLEKQSV--FRTWVATPCENTFPFMCKYP 128 (131)
T ss_dssp CBCSSSBCCSC-CCCCC-SCC-----CEEEEEGGGT--TCSEEEECTTSCEEEEEEEC
T ss_pred eEECCCCeecc-ccccC-CCC-----CeEEEEccCC--CCeEeecCCCCCCcEEeeec
Confidence 99999999987 67777 775 8999976543 14556999999999999985
No 176
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.89 E-value=1.8e-22 Score=200.81 Aligned_cols=185 Identities=19% Similarity=0.273 Sum_probs=133.8
Q ss_pred CceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCC--CeEEEeeCccEEEEeecccCCeeEEEEEEeeecCccccC
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEED--KRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNG 654 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 654 (813)
...+.+|+.++|.|.+ .+.|.+.|.|+|++.++..... .......+++|.|.+++.+|+|.|+|.|.|..|...
T Consensus 24 ~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~--- 99 (241)
T 3grw_A 24 LLAVPAANTVRFRCPA-AGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIR--- 99 (241)
T ss_dssp EEEEETTSEEEEECCE-ECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEE---
T ss_pred ceEEcCCCeEEEEEEe-cCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceE---
Confidence 4567889999999999 6889999999999976533222 123334556799999999999999999999876543
Q ss_pred ceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEe----CCcccCCCcee-----------
Q psy14896 655 PFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR----RGSPLPRNAYF----------- 719 (813)
Q Consensus 655 ~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k----~g~~l~~~~~~----------- 719 (813)
..+.|.|...+........ .......+.+|+.++|.|.+.|.|.|.|+|+| +|..+..+...
T Consensus 100 ~~~~l~V~~~~~~~~~~~~---~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 176 (241)
T 3grw_A 100 QTYTLDVLERSPHRPILQA---GLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISE 176 (241)
T ss_dssp EEEEEEEECCCCCCCEEEE---CTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECS
T ss_pred EEEEEEEeccCCCCceeec---CCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeee
Confidence 3366777653322111100 01223567899999999999999999999999 88887655321
Q ss_pred -eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCcccccC
Q psy14896 720 -ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL 768 (813)
Q Consensus 720 -~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~~~~~ 768 (813)
.....+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|.+...+
T Consensus 177 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~ 226 (241)
T 3grw_A 177 SVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEEL 226 (241)
T ss_dssp BSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC----------
T ss_pred ecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCccc
Confidence 1135679999999999999999999999999999999999998876443
No 177
>1htn_A Tetranectin; plasminogen binding, kringle 4, alpha-helical coiled coil, C-type lectin, carbohydrate recognition domain; 2.80A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1
Probab=99.89 E-value=3.7e-23 Score=193.43 Aligned_cols=128 Identities=15% Similarity=0.182 Sum_probs=110.5
Q ss_pred CCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcC-CCCceEEEEeccCCCCCeEE
Q psy14896 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQSPNLWVN 105 (813)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~-~~~~~w~g~~~~~~~~~~~W 105 (813)
..||.||. |+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||..++.... ....+||||++...++.|.|
T Consensus 49 ~~Cp~gw~-~~~~CY~~~~~~-~tw~~A~~~C~~~gg~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~~~g~w~W 126 (182)
T 1htn_A 49 TVCLKGTK-VHMKCFLAFTQT-KTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNEAEIWLGLNDMAAEGTWVD 126 (182)
T ss_dssp HHHHHSEE-ETTEEEEEEEEE-ECHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHHHHTCSSCEEEEEEECSSSTTCCBC
T ss_pred CCCCCCcE-ECCEEEEEECCC-cCHHHHHHHHhhCCCEEeeeCCHHHHHHHHHHHHhccCCCCcEEEeeECCCCCCeEEe
Confidence 46999999 899999999984 9999999999999999999999999999999885432 24689999999988999999
Q ss_pred cCCCCCCcccccc---CCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 106 EDGTNLNELDAAF---LPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 106 ~dgs~~~~~~~~~---~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.||++++| .+|. .++|++.+.++|+.|.... ...|.+..|.....|+|+..
T Consensus 127 ~dG~~~~y-~nW~~~~~geP~~~~~~~Cv~l~~~~---~g~W~d~~C~~~~~fICe~~ 180 (182)
T 1htn_A 127 MTGARIAY-KNWETEITAQPDGGKTENCAVLSGAA---NGKWFDKRCRDQLPYICQFG 180 (182)
T ss_dssp TTSCBCCC-CCBCCSSSCSCCCTTTCCEEEEETTT---TTEEEEECTTSCEEEEEEEE
T ss_pred CCCCCccC-CCCCCCCCCcCCCCCCCCCEEEccCC---CCCEECCCCCCCeeEEEEEe
Confidence 99999987 6777 6799876678999996532 24556999999999999984
No 178
>2xr6_A CD209 antigen; sugar binding protein, carbohydrate binding, mannose; HET: MAN 07B; 1.35A {Homo sapiens} PDB: 1sl4_A* 2it6_A* 1k9i_A* 2xr5_A* 1sl5_A* 2it5_A* 1xph_A 1k9j_A*
Probab=99.89 E-value=7.2e-23 Score=189.29 Aligned_cols=130 Identities=22% Similarity=0.378 Sum_probs=108.7
Q ss_pred ccccCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCC
Q psy14896 23 DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNL 102 (813)
Q Consensus 23 ~~~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~ 102 (813)
...+..||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||..++.. ....+||||.+...++.
T Consensus 16 ~~~~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~~--~~~~~WIGl~~~~~~~~ 92 (170)
T 2xr6_A 16 ERLSHPCPWEWTFFQGNCYFMSNSQ-RNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSR--SNRFTWMGLSDLNQEGT 92 (170)
T ss_dssp -----CCCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHH--HTCCEEEEEEEEEETTE
T ss_pred ccccCCCCcCcEEeCCEEEEEECCc-CCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHHhcc--CCCCEEeccccCCCCCe
Confidence 3456779999999999999999984 99999999999999999999999999999987643 24579999999877899
Q ss_pred eEEcCCCCCCc--cccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeecc
Q psy14896 103 WVNEDGTNLNE--LDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 161 (813)
Q Consensus 103 ~~W~dgs~~~~--~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~~ 161 (813)
|.|.||+++.+ +.+|..++|++...++|+.|... . |.+..|.....|+|+...
T Consensus 93 w~W~dG~~~~~~~~~~W~~geP~~~~~~~Cv~~~~~----g--W~d~~C~~~~~fICe~~~ 147 (170)
T 2xr6_A 93 WQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN----G--WNDDKCNLAKFWICKKSA 147 (170)
T ss_dssp EEETTSCBCCGGGGGGBCTTCCCCTTCCCEEEEETT----E--EEEECTTSCBEEEEEEET
T ss_pred EEeCCCCCcccccccCCCCCCCCCCCCCCCeEEeCC----c--EEccccCCCccEEEEECC
Confidence 99999999985 35676679987767899998652 2 559999999999999963
No 179
>1j34_A Coagulation factor IX-binding protein A chain; magnesium ION, calcium ION, GLA domain, protein binding/blood clotting complex; HET: CGU; 1.55A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1bj3_A* 1j35_A* 1x2t_A* 1x2w_A 1ixx_A 1y17_A 1wt9_A 1iod_A*
Probab=99.88 E-value=4.2e-23 Score=182.37 Aligned_cols=123 Identities=20% Similarity=0.304 Sum_probs=105.5
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCC-CC-ceEEEEe--ccCCCC
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP-QR-RKWYFGG--TQQSPN 101 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~-~~-~~w~g~~--~~~~~~ 101 (813)
.||.||..|+++||+++... ++|.+|+..|+. .||+||+|+|++|++||.+++..... .. .+||||. +...++
T Consensus 1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~~ 79 (129)
T 1j34_A 1 DCPSGWSSYEGHCYKPFKLY-KTWDDAERFCTEQAKGGHLVSIESAGEADFVAQLVTENIQNTKSYVWIGLRVQGKEKQC 79 (129)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHCCCTTCCEEEEEEECSSCSCS
T ss_pred CCCCCcEEeCCEEEEEECCC-CCHHHHHHHHhccCCCCEECccCCHHHHHHHHHHHhhcccCCCCCEEEeeecCCCCCCC
Confidence 49999999999999999984 999999999999 89999999999999999998865432 24 7999999 887889
Q ss_pred CeEEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeee
Q psy14896 102 LWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (813)
Q Consensus 102 ~~~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~ 159 (813)
.|.|+||++++| .+|..++|+ +|+.|....+ ...|.+..|.....|+|++
T Consensus 80 ~~~W~dg~~~~~-~~W~~~~P~-----~C~~~~~~~~--~~~w~~~~C~~~~~fiCe~ 129 (129)
T 1j34_A 80 SSEWSDGSSVSY-ENWIEAESK-----TCLGLEKETG--FRKWVNIYCGQQNPFVCEA 129 (129)
T ss_dssp CCBCTTSCBCCC-CCBCGGGSC-----CEEEECGGGT--TCSBEEECTTSCEEEEEEC
T ss_pred ceEECCcCccce-eccCCCCCC-----cceEEEccCC--CCeEccCCCCCCCceEeeC
Confidence 999999999987 577666876 8999866543 1445599999999999984
No 180
>3bdw_B NKG2-A/NKG2-B type II integral membrane protein; NK cells, receptor, glycoprotein, lectin, signal-A transmembrane, immune system receptor; 2.50A {Homo sapiens} PDB: 3cdg_K 3cii_H
Probab=99.88 E-value=6.8e-23 Score=177.79 Aligned_cols=117 Identities=20% Similarity=0.458 Sum_probs=99.6
Q ss_pred ccCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeE
Q psy14896 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (813)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~ 104 (813)
.+..||.||..|+++||+|+.. .++|.+|+..|+.+||+||+|+|++|++||.+++ ..+||||.+...++.|.
T Consensus 3 ~c~~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~------~~~WIGl~~~~~~~~w~ 75 (120)
T 3bdw_B 3 HCGHCPEEWITYSNSCYYIGKE-RRTWEESLLACTSKNSSLLSIDNEEEMKFLSIIS------PSSWIGVFRNSSHHPWV 75 (120)
T ss_dssp CCTTSCTTCEESSSSEEEEEEE-EECHHHHHHHHHHTTSEECCCCCHHHHHHHHHHC------SEEEEEEECSSTTSCCE
T ss_pred cCCCCCCCceEECCEEEEEECC-ccCHHHHHHHHHhCCCEEceeCCHHHHHHHHHcC------CCEeEEEEecCCCCceE
Confidence 4678999999999999999998 4999999999999999999999999999998863 47899999988899999
Q ss_pred EcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeee
Q psy14896 105 NEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (813)
Q Consensus 105 W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~ 159 (813)
|+||+++.+ .+ .+|++ ..++|+.|... . |.+..|.....|+|++
T Consensus 76 W~dg~~~~~-~~---~~p~~-~~~~C~~~~~~----~--w~~~~C~~~~~fICe~ 119 (120)
T 3bdw_B 76 TMNGLAFKH-EI---KDSDN-AELNCAVLQVN----R--LKSAQCGSSIIYHCKH 119 (120)
T ss_dssp ETTSSBCCS-CC---C-----CCCCEEEEESS----S--EEEECTTSCEEEEEEC
T ss_pred eCCCCccCc-cC---cCCCC-CCCCccEEeCC----c--eECCCCCCCcceeeee
Confidence 999999987 33 36654 46799998653 2 5599999999999986
No 181
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.88 E-value=1.2e-22 Score=197.28 Aligned_cols=179 Identities=17% Similarity=0.172 Sum_probs=125.4
Q ss_pred CCceeccC--CCceEEeCCCCCCCccEEEEccC---CCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecCc
Q psy14896 576 APEIGNQN--WGKAMFCDPPTNYPGVNYYWARD---YFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDT 650 (813)
Q Consensus 576 ~~~~~~~g--~~~~l~C~~~~~~p~~~v~W~k~---~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 650 (813)
....+.+| +.++|.|.+ .+ |.+.++|+|+ +.. +....++....++.|.|.+++.+|+|.|+|.|.|..+.
T Consensus 15 ~~v~v~eG~~~~v~L~C~~-~~-p~~~v~w~~~~~~g~~--~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~- 89 (213)
T 2x1w_L 15 GVVYITENKNKTVVIPCLG-SI-SNLNVSLCARYPEKRF--VPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDES- 89 (213)
T ss_dssp EEEEECCSTTCEEEECCCB-SS-TTCCEEEEEETTTEEE--CCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----C-
T ss_pred eEEEEecCCCccEEEeecc-CC-CCcEEEEEhhcCCCcc--ccCCCcccccCCccEEEccCChhcCceEEEEEEECCee-
Confidence 34556789 999999998 45 7799999884 543 33344555566678999999999999999999995443
Q ss_pred cccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCC--CeEEEEeCCcccCCCce-e--------
Q psy14896 651 GRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV--PSYNWTRRGSPLPRNAY-F-------- 719 (813)
Q Consensus 651 ~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~--p~i~W~k~g~~l~~~~~-~-------- 719 (813)
..+..+.|.|...+. ..+.+ .+.....+.+|++++|.|.+.|.|. +.|+|+++|..+..... .
T Consensus 90 -~~s~~~~l~v~~~~~-p~~~~----~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~ 163 (213)
T 2x1w_L 90 -YQSIMYIVVVVGYRI-YDVVL----SPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSG 163 (213)
T ss_dssp -EECCCEEEEECBCCE-EEEEE----ESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSS
T ss_pred -EEEEEEEEEEeCCcc-cceEE----cCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccC
Confidence 222335666644211 11111 0111236889999999999998664 58999999987643211 0
Q ss_pred ---eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCccc
Q psy14896 720 ---ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFT 765 (813)
Q Consensus 720 ---~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~~ 765 (813)
....++|+|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|.|.
T Consensus 164 ~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i~ 212 (213)
T 2x1w_L 164 SEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPIEG 212 (213)
T ss_dssp CSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC-----
T ss_pred ccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEecccccC
Confidence 1224579999999999999999999999999999999999998764
No 182
>1sb2_B Rhodocetin beta subunit; C-type lectin, domain swapping, toxin; 1.90A {Calloselasma rhodostoma} SCOP: d.169.1.1 PDB: 3gpr_B
Probab=99.88 E-value=9e-23 Score=179.74 Aligned_cols=121 Identities=18% Similarity=0.298 Sum_probs=104.8
Q ss_pred CCCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcC--CCCceEEEEeccCCCCC
Q psy14896 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQD--PQRRKWYFGGTQQSPNL 102 (813)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~--~~~~~w~g~~~~~~~~~ 102 (813)
..||.||..|+++||+|+.. .++|.+|+..|+. +||+||+|+|++|++||.+++.... ....+||||. ++.
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WiGl~----~~~ 76 (129)
T 1sb2_B 2 FRCPTTWSASKLYCYKPFKE-KKTWIEAERFCAKQAENGHLVSIGSAAEADFLDLVIVVNFDKQRYRAWTGLT----ERN 76 (129)
T ss_dssp CCCCTTCEECSSEEEEEEEE-EECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHC---CCCEEEEEE----ECC
T ss_pred CCCCCCCEEeCCEeEEEECC-CcCHHHHHHHHhhcCCCceECccCCHHHHHHHHHHHHhhcccCCCCEeEeec----CCc
Confidence 36999999999999999998 4999999999999 8999999999999999999886532 2457999998 778
Q ss_pred eEEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 103 WVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 103 ~~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|.|+||++++| .+|..++|+ +|+.|....+ ...|.+..|.....|+|+..
T Consensus 77 ~~W~dg~~~~~-~~W~~~~P~-----~C~~~~~~~~--~~~W~~~~C~~~~~fICe~~ 126 (129)
T 1sb2_B 77 LKWTNGASVSY-ENLYEPYIR-----KCFVVQPWEG--KSKWYKADCEEKNAFLCKFP 126 (129)
T ss_dssp CBCTTSCBCCS-CCBSSCCCC-----CEEEEEEETT--EEEEEEECTTSCEEEEEEEE
T ss_pred cEECCCCcccc-cccCCCCCC-----CeEEEEecCC--CCeEeCcCCCCCcceEeccc
Confidence 99999999987 677766886 8999977654 24566999999999999985
No 183
>1umr_A Convulxin alpha, CVX alpha; lectin, C-type lectin, platelet, sugar-binding protein, activator, snake venom; 2.40A {Crotalus durissus terrificus} SCOP: d.169.1.1 PDB: 1uos_A
Probab=99.88 E-value=3.9e-23 Score=183.97 Aligned_cols=125 Identities=16% Similarity=0.243 Sum_probs=107.6
Q ss_pred CCCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCC-CC-ceEEEEe--ccCCC
Q psy14896 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP-QR-RKWYFGG--TQQSP 100 (813)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~-~~-~~w~g~~--~~~~~ 100 (813)
..||.||..|+++||+|+.. .++|.+|+..|+. +||+||+|+|++|++||.+++..... .. .+||||. +...+
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~ 80 (135)
T 1umr_A 2 LHCPSDWYYYDQHCYRIFNE-EMNWEDAEWFCTKQAKGAHLVSIKSAKEADFVAWMVTQNIEESFSHVSIGLRVQNKEKQ 80 (135)
T ss_dssp CSSCTTCEEETTEEEEEEEE-EECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHSCTTCCEEECSEEECCSSSS
T ss_pred CCCCCCCEEcCCEeEEEECC-CCCHHHHHHHHHccCCCceECccCCHHHHHHHHHHHHhhcccCCCCEEEeccccCCCCC
Confidence 36999999999999999998 4999999999999 89999999999999999998865422 24 7999999 88788
Q ss_pred CCeEEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 101 NLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 101 ~~~~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
+.|.|.||++++| .+|..++|+ +|+.|....+ ...|.+..|.....|+|+..
T Consensus 81 ~~w~W~dg~~~~~-~~W~~g~P~-----~C~~~~~~~~--~g~W~~~~C~~~~~~ICe~~ 132 (135)
T 1umr_A 81 CSTKWSDGSSVSY-DNLLDLYIT-----KCSLLKKETG--FRKWFVASCIGKIPFVCKFP 132 (135)
T ss_dssp SCCBCTTSCBCCC-CCBCGGGCC-----CEEEEEGGGT--TCSBEEECTTCCEEEEEEEC
T ss_pred CccCcCCCCeecc-cccCCCCCC-----ccEEEecCCC--CCeEecCCCCCCCcEEeCcc
Confidence 9999999999987 677666886 8999976543 14455999999999999984
No 184
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.88 E-value=2.3e-22 Score=191.91 Aligned_cols=176 Identities=18% Similarity=0.259 Sum_probs=134.1
Q ss_pred ccccCCCceeccCCCceEEeCCCCCCC-ccEEEEcc-CCCCCcccCCCeEEEe----eCccEEEEeecccCCeeEEEEEE
Q psy14896 571 FNLKRAPEIGNQNWGKAMFCDPPTNYP-GVNYYWAR-DYFPNFVEEDKRVFVS----YDGALYFSALEQIDAGNYSCNVQ 644 (813)
Q Consensus 571 ~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~v~W~k-~~~~~~~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~ 644 (813)
+...+....+.+|+.++|.|.+ .+.| .+.+.|+| +|..+. ....++.+. .+++|.|.+++.+|+|.|+|.|.
T Consensus 5 v~~~p~~~~v~~G~~v~l~C~~-~~~~~~~~v~W~~~~g~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (191)
T 1epf_A 5 VDIVPSQGEISVGESKFFLCQV-AGDAKDKDISWFSPNGEKLS-PNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVT 82 (191)
T ss_dssp EEEESSSEEEETTCCEEEEEEE-CCCSCCCEEEEECTTSCEEC-CBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEecCCCcEEcCCCCEEEEEEC-CCCCCCceEEEEeCCCcccc-CCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEE
Confidence 4445566778899999999999 5655 89999999 776533 234455553 23569999999999999999999
Q ss_pred eeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCc---eeee
Q psy14896 645 SKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA---YFEN 721 (813)
Q Consensus 645 n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~---~~~~ 721 (813)
|..|. .....+.|.|..+|.+... +....+.+|++++|.|.+.|.|.|.|+|+|+|..+.... ....
T Consensus 83 ~~~~~--~~~~~~~l~v~~~p~~~~~--------~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~ 152 (191)
T 1epf_A 83 AEDGT--QSEATVNVKIFQKLMFKNA--------PTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVL 152 (191)
T ss_dssp ETTTE--EEEEEEEEEEECCSEEEEC--------CSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEEC
T ss_pred cCCCc--ceEEEEEEEeecCceEecC--------CCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEe
Confidence 98752 2334577888777655431 223567899999999999999999999999999885322 2223
Q ss_pred cceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEE
Q psy14896 722 FNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI 758 (813)
Q Consensus 722 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 758 (813)
.++.|.|.+++.+|+|.|+|.|.|..|.......+.|
T Consensus 153 ~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 153 SNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp TTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred cCCeEEECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 4568999999999999999999999976665555554
No 185
>2yhf_A C-type lectin domain family 5 member A; immune system; 1.90A {Homo sapiens}
Probab=99.88 E-value=7.7e-23 Score=176.95 Aligned_cols=117 Identities=18% Similarity=0.293 Sum_probs=100.7
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcC
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~d 107 (813)
.||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||.+++ ....+||||.+...++.|.|+|
T Consensus 1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~----~~~~~WIGl~~~~~~~~w~W~d 75 (118)
T 2yhf_A 1 MCPKDWEFYQARCFFLSTSE-SSWNESRDFCKGKGSTLAIVNTPEKLKFLQDIT----DAEKYFIGLIYHREEKRWRWIN 75 (118)
T ss_dssp CCCTTCEEETTEEEEECSSC-BCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHH----CSSCEEEEEEEETTTTEEEETT
T ss_pred CCCCCcEEeCCEEEEEeCCC-CCHHHHHHHHhhcCCEEEEeCCHHHHHHHHHhh----CCCcEEEeccccCCCCcEEEeC
Confidence 49999999999999999985 999999999999999999999999999999887 2357999999988899999999
Q ss_pred CCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 108 GTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 108 gs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|+++. +|..++|+ .++|+.|... ..|.+..|.....|+|++.
T Consensus 76 g~~~~---~~~~~~~~---~~~C~~~~~~-----~~w~~~~C~~~~~fICe~~ 117 (118)
T 2yhf_A 76 NSVFN---GNVTNQNQ---NFNCATIGLT-----KTFDAASCDISYRRICEKN 117 (118)
T ss_dssp TEECC---SCEESCCT---TCCEEEESSS-----SSEEEECTTSCBEEEEEEE
T ss_pred CCcCC---CCccCCCC---CCCeeEEcCC-----CcCccccCCCCceeeeccc
Confidence 99975 35444554 4799998542 2355999999999999974
No 186
>3gpr_D Rhodocetin subunit delta; disulfide bond, lectin, secreted, toxin, cell adhesion; 3.20A {Calloselasma rhodostoma}
Probab=99.88 E-value=1.1e-23 Score=184.30 Aligned_cols=121 Identities=21% Similarity=0.313 Sum_probs=104.5
Q ss_pred CchhhhccCCeEEEEecCCcCCHHHHHhHcccC--CCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEc
Q psy14896 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (813)
Q Consensus 29 Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~--~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~ 106 (813)
||.||..|+++||+|+.+ .++|.+|+..|+.+ ||+||+|++++|++||..++........+||||.+...++.|.|+
T Consensus 1 Cp~gw~~~~~~CY~~~~~-~~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W~ 79 (124)
T 3gpr_D 1 CPLHWSSYNGYCYRVFSE-LKTWEDAESFCYAQHKGSRLASIHSREEEAFVGKLASQTLKYTSMWLGLNNAWAACKWEWS 79 (124)
T ss_dssp CCSSCCCSSSEEEEEEEE-EEESHHHHHHHHHHSTTCBSCCCCSHHHHHHHHHHHHHSCSSCCBCCSEECCSSCSSCSSS
T ss_pred CCCcceecCCEeEEEeCC-CcCHHHHHHHHHhcCCCCEEcccCCHHHHHHHHHHHHhcCCCCCEEEEeEcCCCCCceEEC
Confidence 999999999999999998 49999999999999 999999999999999999986653446899999998888999999
Q ss_pred CCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 107 DGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 107 dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
||++++| .+|.. +| +|+.|....+. ..|.+..|.....|+|+++
T Consensus 80 dg~~~~~-~~W~~-~p------~C~~~~~~~~~--~~W~~~~C~~~~~fiCe~p 123 (124)
T 3gpr_D 80 DDAKLDY-KVWLR-RA------YCAVMVVKTDR--IFWYNRGCEKTVSFLCKFY 123 (124)
T ss_dssp SCCCSCC-BCCCS-CC------CEECCBCCSSS--CBBCEECTTSEEEEEEEEE
T ss_pred CCCcccc-cccCC-CC------CcEEEEcCCCC--CcEeCCCCCCCccEEeeec
Confidence 9999987 56544 33 89998765432 3455999999999999984
No 187
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.88 E-value=3.4e-22 Score=193.73 Aligned_cols=180 Identities=21% Similarity=0.297 Sum_probs=135.2
Q ss_pred CCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcc-----------------cCCCeEEEeeCccEEEEeecccCCe
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV-----------------EEDKRVFVSYDGALYFSALEQIDAG 637 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~-----------------~~~~~~~~~~~~~L~i~~~~~~d~G 637 (813)
..+..+.+|+.++|.|.+ .+.|.+.|.|+|++..... ....++.+..+++|.|.+++.+|+|
T Consensus 6 ~~~~~v~~G~~v~L~C~~-~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G 84 (208)
T 3r4d_A 6 AVPPQVAEDNNVLLLVHN-LPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMG 84 (208)
T ss_dssp EESSEEETTCCEEEEEEC-CCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCE
T ss_pred CccceeecCCcEEEEEeC-CCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCe
Confidence 345667889999999997 6888899999997542110 1234666677789999999999999
Q ss_pred eEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCc
Q psy14896 638 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 717 (813)
Q Consensus 638 ~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~ 717 (813)
.|+|.+.|..+. .....+.|.|..++....+..+. ..+.+|+.++|.|.+.+.| |.|+|+|+|..+..+.
T Consensus 85 ~Y~C~~~~~~~~--~~~~~~~l~V~~~~~~p~i~~~~-------~~~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~ 154 (208)
T 3r4d_A 85 VYTLDMTDENYR--RTQATVRFHVHQPVTQPFLQVTN-------TTVKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTE 154 (208)
T ss_dssp EEEEEEECSSCE--EEEEEEEEEEECCCCCCEEEESC-------SSCCTTCCEEEEEECSCTT-CEEEEEETTEECCCCS
T ss_pred EEEEEEEcccCc--eeEEEEEEEeccCCCCCEEecCC-------ceEeeCCCEEEEEECCCCC-CceEEEECCEeCCCCC
Confidence 999999998542 22344678887765444433221 1288999999999999976 7999999999987665
Q ss_pred eee--ecceEEEECCCCCCCCEEEEEEEEcCCCce-EEEEEEEEEcCCccc
Q psy14896 718 YFE--NFNRILTIPNVKVEDQGEYICRASNDRSAL-ESSVTISIQAEPNFT 765 (813)
Q Consensus 718 ~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~-~~~~~l~V~~~P~~~ 765 (813)
++. ..+.+|.|.++..+|+|.|+|.|.|.+|.. +..++|.|..||.+.
T Consensus 155 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~~~ 205 (208)
T 3r4d_A 155 RMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPHHH 205 (208)
T ss_dssp SEEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC------
T ss_pred CeEEcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCccc
Confidence 443 335789999999999999999999999985 458999999888764
No 188
>3gpr_C Rhodocetin subunit gamma; disulfide bond, lectin, secreted, toxin, cell adhesion; 3.20A {Calloselasma rhodostoma}
Probab=99.88 E-value=2e-23 Score=185.60 Aligned_cols=124 Identities=15% Similarity=0.182 Sum_probs=106.6
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHcccC--CCeEeeeCCHhHHHHHHHHhhhcCCC--CceEEEEeccCCCCC-
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQ--RRKWYFGGTQQSPNL- 102 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~--~~~L~~i~~~~e~~~i~~~~~~~~~~--~~~w~g~~~~~~~~~- 102 (813)
.||.||..|+++||+|+... ++|.+|+..|+.+ ||+||+|+|++|++||.+++...... ..+||||.+...++.
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~G~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~~ 80 (134)
T 3gpr_C 2 NCLPGWSAYDQHCYQAFNEP-KTWDEAERFCTEQAKRGHLVSIGSDGEADFVAQLVTNNIKRPELYVWIGLRDRRKEQQC 80 (134)
T ss_dssp CCCTTCEESSSCEEEECSCC-BCSHHHHHHHTTSSSCCEECCCCCHHHHHHHHHHHHHHHCSSCCBCCCSCBCCSSTTSC
T ss_pred cCCCcceeeCCEEEEEeCCC-cCHHHHHHHHHhhCCCceEeeeCCHHHHHHHHHHHHhhccCCCCcEEEeeEecCCCCCc
Confidence 59999999999999999985 9999999999999 89999999999999999998654332 678999999988999
Q ss_pred e-EEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 103 W-VNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 103 ~-~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
| .|+||++++| .+|..++| ++|+.|....+ ...|.+..|.....|+|+++
T Consensus 81 w~~W~dG~~~~~-~~W~~~~~-----~~Cv~~~~~~~--~~~W~~~~C~~~~~fICe~~ 131 (134)
T 3gpr_C 81 SSEWSMSASIIY-VNWNTGES-----QMCQGLARWTG--FRKWDYSDCQAKNPFVCKFS 131 (134)
T ss_dssp SCEETTCCCSCC-BCBSSCEE-----CCEECCBCSSS--SCBBCEECTTCCBCCEEEEC
T ss_pred CCEeCCcCcccc-cccCCCCC-----CcceEEeccCC--CCcCcCCCCCCCCcEEeCcC
Confidence 9 9999999997 57665554 78999876544 23455999999999999985
No 189
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.88 E-value=1.8e-22 Score=196.05 Aligned_cols=183 Identities=12% Similarity=0.110 Sum_probs=127.6
Q ss_pred ccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEE-EeeCc--cEEEEeecccCCeeEEEEEEe
Q psy14896 569 GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVF-VSYDG--ALYFSALEQIDAGNYSCNVQS 645 (813)
Q Consensus 569 p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~-~~~~~--~L~i~~~~~~d~G~Y~C~a~n 645 (813)
|.+...+. ..+.+|++++|.|.+ .+ +.+.|.|+|+|.++.... .... ...++ +|.|.+++.+|+|.|+|.|.|
T Consensus 10 P~i~~~p~-~~v~~G~~vtL~C~~-~~-~~~~~~W~k~g~~~~~~~-~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 85 (218)
T 1uct_A 10 PFISAKSS-PVIPLDGSVKIQCQA-IR-EAYLTQLMIIKNSTYREI-GRRLKFWNETDPEFVIDHMDANKAGRYQCQYRI 85 (218)
T ss_dssp CCEEESSC-SEEETTCCEEEEECC-CT-TCSEEEEEEEETTEEEEC-SEECC----CCCEEEECSCCGGGCEEEEEEEEE
T ss_pred CEEEecCC-CccCCCCCEEEEEEc-CC-CCCEEEEEECCCcccccc-cccCCCCcceeeEEEEcccccccCEEEEEEEEc
Confidence 33433333 467889999999998 45 678999999987643211 1111 12345 899999999999999999999
Q ss_pred eecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeeecceE
Q psy14896 646 KVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRI 725 (813)
Q Consensus 646 ~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~ 725 (813)
..|... .+..+.|.|...+....+... . ...+.+|++++|.|.+.+.|.+.+.|+|+|..+............
T Consensus 86 ~~~~~~-~s~~~~l~V~~~~~~P~i~~~-----p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~ 158 (218)
T 1uct_A 86 GHYRFR-YSDTLELVVTGLYGKPFLSAD-----R-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPAN 158 (218)
T ss_dssp TTTEEE-ECCCEEEEEECSSCCCEEEES-----S-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCSEEECSSSEE
T ss_pred CCCcee-ecCCEEEEEcCcccCCEEEeC-----C-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccccccCCCccCE
Confidence 765322 233467777653221122111 1 246789999999998788888999999999988654333345678
Q ss_pred EEECCCCCCCCEEEEEEEEcCCC-----ceEEEEEEEEEcCC
Q psy14896 726 LTIPNVKVEDQGEYICRASNDRS-----ALESSVTISIQAEP 762 (813)
Q Consensus 726 L~i~~v~~~d~G~Y~C~a~N~~G-----~~~~~~~l~V~~~P 762 (813)
|.|.+++.+|+|.|+|.|.|..+ ..+..+.|.|.+++
T Consensus 159 L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~~ 200 (218)
T 1uct_A 159 FSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSI 200 (218)
T ss_dssp EECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC---
T ss_pred EEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecCC
Confidence 99999999999999999998642 34567888888654
No 190
>3m9z_A Killer cell lectin-like receptor subfamily B MEMB; C-type lectin-like domain, domain swapping, disulfide bond, transmembrane protein; 1.70A {Mus musculus} SCOP: d.169.1.0 PDB: 3t3a_A
Probab=99.88 E-value=6.2e-23 Score=183.58 Aligned_cols=124 Identities=19% Similarity=0.362 Sum_probs=106.0
Q ss_pred cCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEE
Q psy14896 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (813)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W 105 (813)
...||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||.+++.. ....+||||.+...++.|.|
T Consensus 3 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~--~~~~~WIGl~~~~~~~~w~W 79 (139)
T 3m9z_A 3 KLECPQDWLSHRDKCFHVSQVS-NTWEEGLVDCDGKGATLMLIQDQEELRFLLDSIKE--KYNSFWIGLRYTLPDMNWKW 79 (139)
T ss_dssp -CCCCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCCHHHHHHHHHHHTC--SSSCEEEEEEEECCCCCCBC
T ss_pred CCCCCccceecCCEEEEEECCc-CCHHHHHHHHHhcCCeEeeeCCHHHHHHHHHHhcc--cCccEEEEEeccCCCCCeEe
Confidence 3569999999999999999994 99999999999999999999999999999999853 23579999999988899999
Q ss_pred cCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeecc
Q psy14896 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 161 (813)
Q Consensus 106 ~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~~ 161 (813)
+||+++.+ .+|+..++.+ .++|+.|.. + . |.+..|.....|+|++..
T Consensus 80 ~dg~~~~~-~~~~~~~~~~--~~~Cv~~~~--~--~--w~~~~C~~~~~fICe~~~ 126 (139)
T 3m9z_A 80 INGSTLNS-DVLKITGDTE--NDSCAAISG--D--K--VTFESCNSDNRWICQKEL 126 (139)
T ss_dssp TTSCBCCH-HHHTTSSCTT--CEEEEEEET--T--E--EEEEETTSCBEEEEEEEC
T ss_pred CCCCcCCc-CccccCCCCC--CCCeeEEeC--C--c--EEeCCCCCCCceEeeecC
Confidence 99999998 5777664333 578999853 2 3 459999999999999963
No 191
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.88 E-value=1.4e-21 Score=190.10 Aligned_cols=194 Identities=19% Similarity=0.292 Sum_probs=146.5
Q ss_pred CceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccc--cccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVA--NLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 190 P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
+.|...|.++.+.+| +++.|.|.+.+.|.+.|.|+|++..+..... ..+......++...+++|.|.+. +.+
T Consensus 2 ~~v~~~~~~~~v~~G-----~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v-~~~ 75 (212)
T 1f97_A 2 GSVYTAQSDVQVPEN-----ESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSV-TRK 75 (212)
T ss_dssp CEEECSCSEEEEETT-----CCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCC-CGG
T ss_pred ceEEecCCCeEEEcC-----CCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEccc-Ccc
Confidence 456667788888777 6699999999999999999999976421110 01122345567777889999886 899
Q ss_pred CCeeEEEEeecCcee-eEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccc-cccccCC---
Q psy14896 268 DRGSYHCKASNKFGS-IISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYF-PNFVEED--- 342 (813)
Q Consensus 268 d~G~Y~C~a~n~~g~-~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~-~~~~~~~--- 342 (813)
|+|.|+|.|.|..|. ..+..+.|.|..+|.+.....+..+.+|+.++|.|.+..+.|.+.+.|+|++. ++.....
T Consensus 76 D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~ 155 (212)
T 1f97_A 76 DNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTR 155 (212)
T ss_dssp GCEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CB
T ss_pred cCeEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccc
Confidence 999999999998762 22667888888888776666677889999999999966889999999999998 7543322
Q ss_pred ----ccEEE-ccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEcc
Q psy14896 343 ----KRVFV-SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP 390 (813)
Q Consensus 343 ----~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~ 390 (813)
.++.. ...+.|.|.++..+|+|.|+|.|.|..|.. ..+..+.|.|..
T Consensus 156 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~s~~~~l~V~~ 207 (212)
T 1f97_A 156 AFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTA-MRSEAAHMDAVE 207 (212)
T ss_dssp SCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCC-EECCCEEEEEES
T ss_pred cccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCc-cccceEEEEEEE
Confidence 23333 345689999999999999999999998854 224456777653
No 192
>3alu_A Lectin CEL-IV, C-type; C-type lectin, raffinose, sugar binding protein; HET: RAF; 1.65A {Cucumaria echinata} PDB: 3als_A* 3alt_A*
Probab=99.88 E-value=5.2e-23 Score=188.06 Aligned_cols=129 Identities=18% Similarity=0.313 Sum_probs=111.0
Q ss_pred CCCchhhhccCCeEEEEecCCcCCHHHHHhHccc--C---------CCeEeeeCCHhHHHHHHHHhhhcCC-----C--C
Q psy14896 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--L---------DSDLANVNDADEHGFIMYQLFWQDP-----Q--R 88 (813)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~---------~~~L~~i~~~~e~~~i~~~~~~~~~-----~--~ 88 (813)
..||.||..|+++||+++.. .++|.+|+..|+. + ||+||+|++++|++||.+++..... . .
T Consensus 3 ~~Cp~gw~~~~~~CY~~~~~-~~tw~~A~~~C~~~~~~~~~~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~~~~ 81 (157)
T 3alu_A 3 TSCPPLWTGFNGKCFRLFHN-HLNFDNAENACRQFGLASCSGDELATGHLASIHSAESQAFLTELVKTSLPDLITGGWAP 81 (157)
T ss_dssp CEECTTCEEETTEEEEEEEE-EECHHHHHHHHTTEEEEETTSCEEEECEECCCCSHHHHHHHHHHHHHHCGGGCCSSSCS
T ss_pred CCCCCCcEeeCCEEEEEECC-ccCHHHHHHHhhccccccccCCCCCCeEEcccCCHHHHHHHHHHHHhcccccccccCCC
Confidence 35999999999999999998 4999999999999 8 9999999999999999999865422 2 6
Q ss_pred ceEEEEeccCCCCCeEEcCCCCCCccccccCCCCCCcc-cCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 89 RKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 89 ~~w~g~~~~~~~~~~~W~dgs~~~~~~~~~~~~p~~~~-~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.+||||.+...++.|.|.||++++| .+|..++|++.. .++|+.|....+ ..|.+..|.....|+|+..
T Consensus 82 ~~WIGl~~~~~~~~w~W~dG~~~~y-~~W~~g~P~~~~~~~~Cv~~~~~~~---~~W~d~~C~~~~~fICe~~ 150 (157)
T 3alu_A 82 QVYIGMKVGSTNSDQTWTDGSSVDY-DGWVSGEPNNGPNSRGAIAAGDYSR---GFWADVYSNNNFKYICQLP 150 (157)
T ss_dssp EEEEEEEECSSTTCEEETTCCCCCC-CCBCTTCCCSCSSEEEEEECSTTTT---TCEEEECTTCCEEEEEECC
T ss_pred CEEEeeeeCCCCCCeEeCCCCCCCc-cCcCCCCCCCCCCCCCeEEEecCCC---CeEcCCCCCCccceEeccc
Confidence 7999999988889999999999987 677777998753 679999865432 4455999999999999985
No 193
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.88 E-value=8.1e-23 Score=195.76 Aligned_cols=170 Identities=14% Similarity=0.114 Sum_probs=110.8
Q ss_pred cccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeee
Q psy14896 568 IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKV 647 (813)
Q Consensus 568 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 647 (813)
+|.+...+. ..+.+|+.++|.|.+ .+.|. .+.|+|++.++............+++|.|.+++.+|+|.|+|.|.|..
T Consensus 5 ~P~i~~~p~-~~v~~G~~v~L~C~~-~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 2d3v_A 5 KATLWAEPG-SVISRGNSVTIRCQG-TLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPA 81 (196)
T ss_dssp BCEEEEESC-SEEETTCCEEEEEEC-CTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCEEEeCCC-CcccCCCeEEEEEeC-CCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCC
Confidence 344444333 367889999999999 56665 999999997643211111111234579999999999999999999987
Q ss_pred cCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCcee---e---e
Q psy14896 648 SDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF---E---N 721 (813)
Q Consensus 648 g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~---~---~ 721 (813)
|.... +..+.|.|...+....+..+ ....+.+|++++|.|.+.+.| |.|+|+|+|..+...... . .
T Consensus 82 g~~~~-s~~~~l~V~~~~~~p~i~~~------~~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~ 153 (196)
T 2d3v_A 82 GWSEP-SDPLELVVTGFYNKPTLSAL------PSPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQ 153 (196)
T ss_dssp EECBC-CCCEEEEEECSSCCCEEEC-----------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSC
T ss_pred CcCCc-CccEEEEecCCCCCCeEEcc------CCccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCC
Confidence 64322 23467777764322222111 114678999999999999999 899999999987543211 1 1
Q ss_pred cceEEEECCCCCCCCEEEEEEEEcCCC
Q psy14896 722 FNRILTIPNVKVEDQGEYICRASNDRS 748 (813)
Q Consensus 722 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G 748 (813)
....|.|.+++.+|+|.|+|.|.|..+
T Consensus 154 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 154 FQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp EEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred ceeEEEeeecCcccCeeEEEEEEccCC
Confidence 237899999999999999999999865
No 194
>3ff7_C Killer cell lectin-like receptor subfamily G member 1; KLRG1-cadherin complex, calcium, cell adhesion, cell junction, cell membrane; 1.80A {Homo sapiens} SCOP: d.169.1.0
Probab=99.88 E-value=1.5e-22 Score=173.12 Aligned_cols=112 Identities=24% Similarity=0.405 Sum_probs=96.6
Q ss_pred CchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcCC
Q psy14896 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDG 108 (813)
Q Consensus 29 Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~dg 108 (813)
||.||..|+++||+|+.+. ++|.+|+..|+.+||+||+|+|++|++||.+++. ...+||||.+ ++.|.|+||
T Consensus 1 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~WiGl~~---~~~~~W~dg 72 (112)
T 3ff7_C 1 CPDRWMKYGNHCYYFSVEE-KDWNSSLEFCLARDSHLLVITDNQEMSLLQVFLS----EAFSWIGLRN---NSGWRWEDG 72 (112)
T ss_dssp CCTTCEEETTEEEEECSSC-BCHHHHHHHHHTTTCEECCCCSHHHHHHHHTTCC----SSCEEEEEEE---SSSEEETTS
T ss_pred CCccceEeCCEEEEEeCCc-cCHHHHHHHHhhcCCeEeeECCHHHHHHHHHhcc----CCCEEEeeec---CCceEeCCC
Confidence 9999999999999999994 9999999999999999999999999999988863 3579999997 568999999
Q ss_pred CCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeee
Q psy14896 109 TNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (813)
Q Consensus 109 s~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~ 159 (813)
+++.| .+|.... ..++|+.|... . |.+..|.....|+|++
T Consensus 73 ~~~~~-~~w~~~~----~~~~C~~~~~~----~--w~~~~C~~~~~fICek 112 (112)
T 3ff7_C 73 SPLNF-SRISSNS----FVQTCGAINKN----G--LQASSCEVPLHWVCKK 112 (112)
T ss_dssp CBCCS-SCEECSS----TTCCEEEEETT----E--EEEECTTSCBEEEEEC
T ss_pred Ccccc-ceecCCC----CCCCCeEEeCC----C--cccCCCCCCCceeecC
Confidence 99997 5664322 36799998652 2 5599999999999984
No 195
>1mpu_A NKG2-D type II integral membrane protein; C-type lectin-like domain, immune system; 2.50A {Homo sapiens} SCOP: d.169.1.1 PDB: 1hyr_B
Probab=99.88 E-value=3e-23 Score=184.84 Aligned_cols=120 Identities=21% Similarity=0.396 Sum_probs=104.1
Q ss_pred ccCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeE
Q psy14896 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (813)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~ 104 (813)
.+..||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||..+ ...+||||.+...++.|.
T Consensus 17 ~~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~fl~~~------~~~~WIGl~~~~~~~~w~ 89 (138)
T 1mpu_A 17 YCGPCPKNWICYKNNCYQFFDES-KNWYESQASCMSQNASLLKVYSKEDQDLLKLV------KSYHWMGLVHIPTNGSWQ 89 (138)
T ss_dssp CCCCCCTTCEECSSCEEEEEEEE-ECHHHHHHHHHHTSCEECCCCCTTTCGGGGGC------CSEEEEEEEECTTTCCEE
T ss_pred ccCCCChhheEeCCEEEEEECCC-CCHHHHHHHHHhcCCEEeeeCCHHHHHHHHhc------cCCEeEeeeccCCCCceE
Confidence 45679999999999999999984 99999999999999999999999999999753 257999999988899999
Q ss_pred EcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 105 NEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 105 W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|.||+++.| .+|..++|+ .++|+.|... + .|.+..|.....|+|++.
T Consensus 90 W~dG~~~~~-~~w~~~~p~---~~~C~~~~~~-~----~w~~~~C~~~~~fICe~~ 136 (138)
T 1mpu_A 90 WEDGSILSP-NLLTIIEMQ---KGDCALYASS-F----KGYIENCSTPNTYICMQR 136 (138)
T ss_dssp ETTSCBCCT-TSCEEECSS---CCSEEEEETT-T----EEEEECTTSCEEEEEEEC
T ss_pred eCCCCcCCc-cccccCCCC---CCCCeEEECC-C----cEEccCCCCCCeEcccCc
Confidence 999999997 566666885 4799998643 1 345999999999999984
No 196
>2e3x_B Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=99.88 E-value=4.8e-23 Score=183.20 Aligned_cols=124 Identities=20% Similarity=0.228 Sum_probs=106.1
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHccc--CCCeEeeeCCHhHHHHHHHHhhhcCC-CC-ceEEEEe--ccCCCC
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP-QR-RKWYFGG--TQQSPN 101 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~-~~-~~w~g~~--~~~~~~ 101 (813)
.||.||..|+++||+++... ++|.+|+..|+. .||+||+|++++|++||.+++..... .. .+||||. +...++
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~~ 80 (134)
T 2e3x_B 2 DCPPDSSLYRYFCYRVFKEH-KTWEAAERFCMEHPNNGHLVSIESMEEAEFVAKLLSNTTGKFITHFWIGLMIKDKEQEC 80 (134)
T ss_dssp CCTTTSEEETTEEEEEEEEE-EEHHHHHHHHTSTTTTCCBCCCCSHHHHHHHHHHHHTCC----CEEECCEEECSSCTTT
T ss_pred CCCCCCEEeCCEeeEEeCCC-cCHHHHHHHHhccCCCcEEcccCCHHHHHHHHHHHHhhccCCCCCEEEeeeecCCCCCC
Confidence 59999999999999999984 999999999999 89999999999999999998865422 14 7999999 887889
Q ss_pred CeEEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 102 LWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 102 ~~~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.|.|.||++++| .+|..++|+ +|+.|....+ ...|.+..|.....|+|++.
T Consensus 81 ~~~W~dg~~~~~-~~W~~~~P~-----~C~~~~~~~~--~~~w~~~~C~~~~~~ICe~~ 131 (134)
T 2e3x_B 81 SSEWSDGSSVSY-DKLGKQEFR-----KCFVLEKESG--YRMWFNRNCEERYLFVCKVP 131 (134)
T ss_dssp TCCCTTSCCCCC-CCBCGGGCC-----CEEEEEGGGT--TCCBEEECTTSEEEEEEEEC
T ss_pred ccEeCCCCcccc-cccCCCCCC-----CeEEEEecCC--CCcCCCCCCCCCcceEeCcc
Confidence 999999999987 677666876 8999976543 14455999999999999984
No 197
>1hup_A Mannose-binding protein; alpha-helical coiled-coil, C-type lectin; 2.50A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1
Probab=99.88 E-value=8.4e-23 Score=182.54 Aligned_cols=121 Identities=16% Similarity=0.118 Sum_probs=106.6
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcC
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~d 107 (813)
.|+.||..|+++||+++... ++|.+|+..|+.+||+||+|+|++|++||.+++. ..+||||.+...++.|.|.|
T Consensus 19 ~~~~~w~~~~~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~WIGl~~~~~~~~w~W~d 92 (141)
T 1hup_A 19 LTFSLGKQVGNKFFLTNGEI-MTFEKVKALCVKFQASVATPRNAAENGAIQNLIK-----EEAFLGITDEKTEGQFVDLT 92 (141)
T ss_dssp HHHHTSEEETTEEEEEEEEE-EEHHHHHHHHHHTTCEECCCCSHHHHHHHHHHCS-----SCEEEEEECSSSTTCCEETT
T ss_pred hhcCCeEEECCEEEEEeCCC-cCHHHHHHHHHhCCCEECccCCHHHHHHHHHHhc-----CCEEEeeeecCcCCcEEECC
Confidence 58999999999999999884 9999999999999999999999999999998863 67999999988899999999
Q ss_pred CCCCCccccccCCCCCC-cccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 108 GTNLNELDAAFLPEPAD-NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 108 gs~~~~~~~~~~~~p~~-~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|++++| .+|..++|++ .+.++|+.|.. . ..|.+..|.....|+|+.+
T Consensus 93 G~~~~~-~~W~~g~P~~~~~~~~Cv~~~~-~----g~W~~~~C~~~~~fICe~~ 140 (141)
T 1hup_A 93 GNRLTY-TNWNEGEPNNAGSDEDCVLLLK-N----GQWNDVPCSTSHLAVCEFP 140 (141)
T ss_dssp SCBCSC-CCBCTTCCCCGGGCCCEEEECT-T----SCEEEECTTSEEEEEEEEE
T ss_pred cCCCcC-CCCCCCCCCCCCCCCCeEEECC-C----CcEeccCCCCCccEEEEEE
Confidence 999987 6777779987 35789999862 2 2455999999999999974
No 198
>2ls8_A C-type lectin domain family 4 member D; structural genomics, NEW YORK structural genomics research consortium, nysgrc, PSI-biology, immune system; NMR {Homo sapiens}
Probab=99.80 E-value=2.5e-24 Score=196.31 Aligned_cols=128 Identities=20% Similarity=0.344 Sum_probs=110.9
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcC
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~d 107 (813)
.||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||.+++.. ...+||||.+...++.|.|.|
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~---~~~~WIGl~~~~~~~~w~W~d 77 (156)
T 2ls8_A 2 VCPIDWRAFQSNCYFPLTDN-KTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDR---RLSYFLGLRDENAKGQWRWVD 77 (156)
Confidence 59999999999999999995 99999999999999999999999999999998742 356899999988899999999
Q ss_pred CCCCCc-cccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeecc
Q psy14896 108 GTNLNE-LDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 161 (813)
Q Consensus 108 gs~~~~-~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~~ 161 (813)
|+++.. +.+|..++|++...++|+.|....+. +.|.+..|.....|+|++..
T Consensus 78 G~~~~~~~~~W~~g~P~~~~~~~Cv~l~~~~~~--~~W~d~~C~~~~~fICe~~~ 130 (156)
T 2ls8_A 78 QTPFNPRRVFWHKNEPDNSQGENCVVLVYNQDK--WAWNDVPCNFEASRICKIPG 130 (156)
Confidence 999842 35777779987668899999765442 45669999999999999953
No 199
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.88 E-value=4.9e-23 Score=199.87 Aligned_cols=176 Identities=19% Similarity=0.311 Sum_probs=135.3
Q ss_pred ccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCC----------cccCCCeEEEeeCccEEEEeecccCCeeEEEE
Q psy14896 573 LKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPN----------FVEEDKRVFVSYDGALYFSALEQIDAGNYSCN 642 (813)
Q Consensus 573 ~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~----------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 642 (813)
..+....+.+|+.++|.|.+ .+.|.+.+.|+|++..+ ......++.... ++|.|.+++.+|+|.|+|.
T Consensus 9 ~~~~~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~L~i~~~~~~d~G~Y~C~ 86 (209)
T 1nbq_A 9 SSEPEVRIPENNPVKLSCAY-SGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP-TGITFKSVTREDTGTYTCM 86 (209)
T ss_dssp CSCSBCCEETTCCCEEECEE-ESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET-TEEECSCCCTTSCSEEEEE
T ss_pred cCCCceEEEcCCCEEEEEEE-eCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec-cEEEEeeCCHHHCcEEEEE
Confidence 34455667889999999999 68899999999988652 112233444433 7899999999999999999
Q ss_pred EEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEe-cCCCCCeEEEEeCCcccCCCcee--
Q psy14896 643 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-FGYPVPSYNWTRRGSPLPRNAYF-- 719 (813)
Q Consensus 643 a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~-~g~P~p~i~W~k~g~~l~~~~~~-- 719 (813)
|.|..|. ......+.|.|..+|...... .+..+.+|+.++|.|.+ .|.|.|.|+|+|+|..+......
T Consensus 87 ~~~~~g~-~~~~~~~~l~V~~~p~~~~~~--------~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~ 157 (209)
T 1nbq_A 87 VSEEGGN-SYGEVKVKLIVLVPPSKPTVN--------IPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTR 157 (209)
T ss_dssp EEETTSS-CEECCEEECCEEBCCCCCCCC--------CBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSS
T ss_pred EecCCCC-ccceEEEEEEEecCCcCCCcc--------cccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccce
Confidence 9998763 333445778888877654431 12457899999999997 89999999999999988764321
Q ss_pred ---------eecceEEEECCCCCCCCEEEEEEEEcCCCce--EEEEEEEEE
Q psy14896 720 ---------ENFNRILTIPNVKVEDQGEYICRASNDRSAL--ESSVTISIQ 759 (813)
Q Consensus 720 ---------~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~--~~~~~l~V~ 759 (813)
....+.|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|.
T Consensus 158 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V~ 208 (209)
T 1nbq_A 158 AFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAV 208 (209)
T ss_dssp SCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEEE
T ss_pred eeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEEe
Confidence 2246789999999999999999999999998 445566554
No 200
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.88 E-value=1.4e-22 Score=193.61 Aligned_cols=167 Identities=14% Similarity=0.171 Sum_probs=120.4
Q ss_pred ccccEEEEee---eccCCCCeEEEeeccccccccccc-------ccccCCCccEEe--e--CCeEEEcCCccccCCeeEE
Q psy14896 208 ILNDITLSCY---AGGYPNPSYEWFKEDYVQDRLVAN-------LIDPLSDKRFTL--S--GGNLIINDPRQVEDRGSYH 273 (813)
Q Consensus 208 ~g~~v~l~C~---~~g~P~p~v~W~k~g~~l~~~~~~-------~~~~~~~~~~~~--~--~~~l~i~~~~~~~d~G~Y~ 273 (813)
+|++++|.|. +.+.|.|.|+|||+|..+...... ........++.. . ..+|.|.+. +.+|+|.|+
T Consensus 7 ~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v-~~~D~G~Y~ 85 (203)
T 4fa8_A 7 LGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAA-NISHDGNYL 85 (203)
T ss_dssp TTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSC-CGGGCEEEE
T ss_pred cCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccC-CHHHCeEEE
Confidence 3488999994 678899999999998754321100 001111112221 1 235777775 899999999
Q ss_pred EEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeecccccc--ccCCccEEEccCc
Q psy14896 274 CKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNF--VEEDKRVFVSYDG 351 (813)
Q Consensus 274 C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~--~~~~~~~~~~~~~ 351 (813)
|.|.|..|.. +..+.|.|..+|.+...+....+.+|+.++|.|.+ .|.|.|+|+|++++..+. .....++.+..+|
T Consensus 86 C~a~n~~g~~-~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~-~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g 163 (203)
T 4fa8_A 86 CRMKLGETEV-TKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTV-NAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDG 163 (203)
T ss_dssp EEEEETTEEE-EEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEE-EEESCCEEEECCC------------CCEECTTS
T ss_pred EEEEcCCCcE-EEEEEEEecCCceeeecceeEEEcCCCEEEEEEEc-CCCCCCEEEEEECCeeecCcccccceEEEeCCC
Confidence 9999999987 67788999887777766667778889999999996 789999999998765432 3346678888888
Q ss_pred cEEE---eeeeecCCeeeEEEEeeecccc
Q psy14896 352 ALYF---SALEQIDAGNYSCNVQSKVSDT 377 (813)
Q Consensus 352 ~L~i---~~v~~~D~G~Y~C~a~n~~g~~ 377 (813)
+|.| .++..+|+|.|+|.|.|..|+.
T Consensus 164 ~l~il~i~~v~~~D~G~YtC~A~N~~G~a 192 (203)
T 4fa8_A 164 SLSVAVDLSLPKPWHLPVTCVGKNDKEEA 192 (203)
T ss_dssp CEEEEEEEEECSSCCCCEEEEEESSSCEE
T ss_pred CEEEEEECCCCHHHCEEEEEEEEcCCCEE
Confidence 7655 6899999999999999999864
No 201
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.88 E-value=7.3e-22 Score=188.11 Aligned_cols=181 Identities=19% Similarity=0.323 Sum_probs=135.6
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEe-eCCeEEEcCCcccc
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL-SGGNLIINDPRQVE 267 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~~ 267 (813)
+|.|...|.+..+.+| +++.|.|.+.+.|.+.+.|+|++..+. ...+.++.. .+++|.|.+. +.+
T Consensus 2 ~~~~~~~~~~~~v~~G-----~~v~l~C~~~~~p~~~v~W~~~~~~~~--------~~~~~~~~~~~~~~L~i~~~-~~~ 67 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQG-----EDAEVVCRVSSSPAPAVSWLYHNEEVT--------TISDNRFAMLANNNLQILNI-NKS 67 (189)
T ss_dssp CCEEEECCSSEEEETT-----SCEEECCEEECSSCCEEEEEC-----C--------BCCCTTEEECTTSCEEETTC-CGG
T ss_pred CceeeccCCCEEEeCC-----CcEEEEEEEcCCCCCEEEEEECCccce--------eccCCeEEEecCCCEEEeeC-CHh
Confidence 5889999999998887 669999999999999999999997653 223444443 4678888885 899
Q ss_pred CCeeEEEEeecCce-eeEeeeeEEeeeeecccccCCC--CceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCcc
Q psy14896 268 DRGSYHCKASNKFG-SIISESVQLAFGFIGEFNLKRA--PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKR 344 (813)
Q Consensus 268 d~G~Y~C~a~n~~g-~~~s~~~~l~v~~~~~~~~~~~--~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~ 344 (813)
|+|.|+|.|.|..+ ...+..+.+.|..+|.+..... ...+.+|+.++|.|.+ .|.|.+.+.|+++|.++ ....+
T Consensus 68 d~G~Y~C~~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~v~W~~~g~~~--~~~~~ 144 (189)
T 2v5t_A 68 DEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRA-SGSPEPAISWFRNGKLI--EENEK 144 (189)
T ss_dssp GCEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEE-EEESCCEEEEEETTEEC--CCSSS
T ss_pred HCcEEEEEEEEcCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEE-ccCCCCeEEEEECCEEC--cCCCc
Confidence 99999999998764 3334567778877776655444 3455678889999996 67799999999999874 33344
Q ss_pred EEEcc-CccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEc
Q psy14896 345 VFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389 (813)
Q Consensus 345 ~~~~~-~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~ 389 (813)
+.+.. +++|.|.++..+|+|.|+|.|.|..|.... .+.|.|.
T Consensus 145 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~---~~~l~V~ 187 (189)
T 2v5t_A 145 YILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEK---QAFLQVF 187 (189)
T ss_dssp EEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEE---EEEEEEE
T ss_pred EEEecCCCEEEEcCCChhhCeeEEEEEEeCCCceeE---EEEEEEE
Confidence 44433 558999999999999999999999886443 2556553
No 202
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.88 E-value=3.3e-22 Score=189.18 Aligned_cols=161 Identities=16% Similarity=0.139 Sum_probs=119.6
Q ss_pred cccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeee
Q psy14896 568 IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKV 647 (813)
Q Consensus 568 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 647 (813)
+|.+...+. ..+.+|+.++|.|.+ .+ |.+.+.|+|+|.. ....+++|.|.+++.+|+|.|+|.|.|..
T Consensus 8 ~P~i~~~p~-~~v~~G~~v~L~C~~-~~-~~~~~~W~k~g~~---------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 75 (184)
T 2gi7_A 8 KPSLQALPS-SLVPLEKPVTLRCQG-PP-GVDLYRLEKLSSS---------RYQDQAVLFIPAMKRSLAGRYRCSYQNGS 75 (184)
T ss_dssp CCEEEEESC-SEEETTCCEEEEEEC-ST-TCSEEEEEETTTC---------CEESSSEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCeEEeCCC-ccccCCCcEEEEEeC-CC-CCCEEEEEECCcc---------ccCcccEEEECcCChhhCceEEEEEEcCC
Confidence 344444333 367899999999998 55 7789999999864 23456789999999999999999999987
Q ss_pred cCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeeecceEEE
Q psy14896 648 SDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILT 727 (813)
Q Consensus 648 g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~ 727 (813)
|... .+..+.|.|...+....+... . ...+.+|++++|.|.+.+.| +.++|+|+|..+............|.
T Consensus 76 g~~~-~s~~~~l~V~~~~~~p~i~~~-----p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~L~ 147 (184)
T 2gi7_A 76 LWSL-PSDQLELVATGVFAKPSLSAQ-----P-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNPERWYRASFP 147 (184)
T ss_dssp EEBC-CCCCEEEEEESSSCCCEEEEE-----C-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCCCEEEEESSS
T ss_pred CccC-CCCCEEEEecCcCCCCEEEeC-----C-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceecCCCceEEEE
Confidence 6322 233466777543221111111 1 24678999999999998765 69999999998876443444567899
Q ss_pred ECCCCCCCCEEEEEEEEcCCC
Q psy14896 728 IPNVKVEDQGEYICRASNDRS 748 (813)
Q Consensus 728 i~~v~~~d~G~Y~C~a~N~~G 748 (813)
|.+++.+|+|.|+|.|.|..+
T Consensus 148 i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 148 IITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp EEEETTCCSEEEEEEEECTTS
T ss_pred EccCCccCCeEEEEEEEeCCC
Confidence 999999999999999999864
No 203
>3ff9_A Killer cell lectin-like receptor subfamily G member 1; natural killer cell receptor KLTG1, glycoprotein, membrane, phosphoprotein, signal-anchor; 1.80A {Mus musculus} SCOP: d.169.1.0 PDB: 3ff8_C
Probab=99.88 E-value=1.7e-22 Score=173.67 Aligned_cols=113 Identities=20% Similarity=0.252 Sum_probs=97.2
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcC
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~d 107 (813)
.||.||..|+++||+|+.+. ++|.+|+..|+.+||+||+|+|++|++||.+++. ...+||||.+ ++.|.|+|
T Consensus 1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~WIGl~~---~~~w~W~d 72 (115)
T 3ff9_A 1 MCPILWTRNGSHCYYFSMEK-KDWNSSLKFCADKGSHLLTFPDNQGVKLFGEYLG----QDFYWIGLRN---IDGWRWEG 72 (115)
T ss_dssp CCCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCTTSCCHHHHHTTCC----SSCEEEEEEE---SSSEEETT
T ss_pred CCCccceecCCEEEEEEcCC-cCHHHHHHHHHhcCCeeeeeCCHHHHHHHHHhhC----CCcEEEeeee---CCceEeCC
Confidence 49999999999999999985 9999999999999999999999999999998863 3579999997 56899999
Q ss_pred CCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 108 GTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 108 gs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|+++.+ +| +|++ ..++|+.|... . |.+..|.....|+|++.
T Consensus 73 g~~~~~--~~---~p~~-~~~~C~~~~~~----~--w~~~~C~~~~~fICe~~ 113 (115)
T 3ff9_A 73 GPALSL--RI---LTNS-LIQRCGAIHRN----G--LQASSCEVALQWICKKV 113 (115)
T ss_dssp SCBCCS--CC---BCSS-TTCCEEEEETT----E--EEEECTTSCBEEEEEEE
T ss_pred CCcccc--cc---cCCC-CCCCCeEEcCC----C--cccccCCCCCceEEEEe
Confidence 999987 33 3333 46899998652 2 55999999999999984
No 204
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.87 E-value=1.5e-22 Score=193.87 Aligned_cols=179 Identities=13% Similarity=0.174 Sum_probs=125.6
Q ss_pred cccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecC
Q psy14896 570 EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSD 649 (813)
Q Consensus 570 ~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 649 (813)
.+...+.. .+.+|+.++|.|.+ .+ |.+.+.|+|++.++............+++|.|.+++.+|+|.|+|.|.|..|.
T Consensus 7 ~i~~~p~~-~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 83 (196)
T 3p2t_A 7 TLWAEPGS-VISWGNSVTIWCQG-TL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGW 83 (196)
T ss_dssp EEEEESCS-EEETTCCEEEEEEC-CT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred EEEccCCC-cCCCCCcEEEEeeC-CC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCcc
Confidence 33344444 67889999999998 55 77899999999764321110000123457999999999999999999998873
Q ss_pred ccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCce-----eeecce
Q psy14896 650 TGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY-----FENFNR 724 (813)
Q Consensus 650 ~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~-----~~~~~~ 724 (813)
.. .+..+.|.|...+....+.... ...+.+|++++|.|.+.+ +++.+.|+|+|..+..... ......
T Consensus 84 ~~-~s~~~~l~V~~~~~~p~~~~~~------~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~ 155 (196)
T 3p2t_A 84 SQ-PSDPLELVMTGAYSKPTLSALP------SPLVTSGKSVTLLCQSRS-PMDTFLLCKERAAHPLLCLRSEHGAQQHQA 155 (196)
T ss_dssp BC-CCCCEEEEEECSSCCCEEEEES------CSEECTTCCEEEEEEEEE-EEEEEEEEETTCCCGGGSEEEEEEEEEEEE
T ss_pred cC-CCccEEEEecCCCCCCEEEeCC------cceecCCCeEEEEEecCC-CCCEEEEEeCCCcccceeecccccccCcce
Confidence 22 2334677776543222222111 125689999999999988 4569999999987754331 123457
Q ss_pred EEEECCCCCCCCEEEEEEEEcCCC-----ceEEEEEEEEE
Q psy14896 725 ILTIPNVKVEDQGEYICRASNDRS-----ALESSVTISIQ 759 (813)
Q Consensus 725 ~L~i~~v~~~d~G~Y~C~a~N~~G-----~~~~~~~l~V~ 759 (813)
.|.|.+++.+|+|.|+|.|.|..+ ..+..+.|.|.
T Consensus 156 ~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 195 (196)
T 3p2t_A 156 EFPMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIVS 195 (196)
T ss_dssp EEEECSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEEEC
T ss_pred EEEeCCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEEeC
Confidence 899999999999999999999976 34556677664
No 205
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.87 E-value=2e-22 Score=196.72 Aligned_cols=181 Identities=24% Similarity=0.375 Sum_probs=136.9
Q ss_pred ccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeec
Q psy14896 569 GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVS 648 (813)
Q Consensus 569 p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 648 (813)
+.+...+....+.+|+.++|.|.+ .+.|.+.|.|+|++.++... .+++|.|.+++.+|+|.|+|.|.|..|
T Consensus 19 ~~i~~~p~~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~~~n~~~ 89 (218)
T 3k0w_A 19 SKITVNPESKAVLAGQFVKLCCRA-TGHPFVQYQWFKMNKEIPNG--------NTSELIFNAVHVKDAGFYVCRVNNNFT 89 (218)
T ss_dssp CCEEECCCCEEEETTSBEEEECEE-TTTTSSEEEEEETTEECTTC--------CSSEEEETTCCGGGCEEEEEEEECTTC
T ss_pred CEEEECCCCeEEeCCCcEEEEeee-cCCCCCEEEEEECCEECCCC--------CCCEEEEccCChhhCeEeEEEEEcCCC
Confidence 345555667778899999999999 78899999999998753221 356799999999999999999999876
Q ss_pred CccccCceeeEEEccCCCcccccc-------CCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeee
Q psy14896 649 DTGRNGPFFPLKVFPHSNFQQLKF-------PNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN 721 (813)
Q Consensus 649 ~~~~~~~~~~l~v~~~p~~~~~~~-------p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~ 721 (813)
... ...+.|.|...+....... |..........+.+|+.++|.|.+.|.|.|.|+|+|+|..+....
T Consensus 90 ~~~--s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~---- 163 (218)
T 3k0w_A 90 FEF--SQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET---- 163 (218)
T ss_dssp CEE--CCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCC----
T ss_pred Cce--eeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCC----
Confidence 432 2346777776643211110 111112223567899999999999999999999999999887653
Q ss_pred cceEEEECCCCCCCCEEEEEEEEcCCCc-eEEEEEEEEEcCCccc
Q psy14896 722 FNRILTIPNVKVEDQGEYICRASNDRSA-LESSVTISIQAEPNFT 765 (813)
Q Consensus 722 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~V~~~P~~~ 765 (813)
...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|...+.+.
T Consensus 164 -~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~~~~ 207 (218)
T 3k0w_A 164 -KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELNNLG 207 (218)
T ss_dssp -SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC-----
T ss_pred -CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCCccCC
Confidence 468999999999999999999999998 6778899998755443
No 206
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.87 E-value=2.9e-22 Score=192.28 Aligned_cols=180 Identities=13% Similarity=0.097 Sum_probs=122.7
Q ss_pred ccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeee-
Q psy14896 569 GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKV- 647 (813)
Q Consensus 569 p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~- 647 (813)
|.+...+. ..+.+|+.++|.|.+ .+.|. .+.|+|+|.++............+++|.|.+++.+|+|.|+|.|.|..
T Consensus 6 P~i~~~p~-~~v~~G~~v~L~C~~-~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 82 (198)
T 1ugn_A 6 PTLWAEPG-SVITQGSPVTLRCQG-GQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTA 82 (198)
T ss_dssp CEEEEESC-SEEETTCCEEEEEEC-CTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTT
T ss_pred CeEeccCC-CcccCCCcEEEEEEe-cCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCC
Confidence 33443333 367889999999999 56665 799999997643211111112345679999999999999999999987
Q ss_pred cCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCcee---e---e
Q psy14896 648 SDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF---E---N 721 (813)
Q Consensus 648 g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~---~---~ 721 (813)
|... .+..+.|.|...+....+..+ ....+.+|++++|.|.+.|. .|.|+|+|+|..+...... . .
T Consensus 83 g~~~-~s~~~~l~V~~~~~~p~i~~~------~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~ 154 (198)
T 1ugn_A 83 GRSE-SSDPLELVVTGAYIKPTLSAQ------PSPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGS 154 (198)
T ss_dssp EECC-CCCCEEEEEECSSCCCEEEEE------SCSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------C
T ss_pred Cccc-CCccEEEEEcccccCCccccC------CccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCc
Confidence 5322 233467888763322222111 11467899999999999998 6799999999987543321 1 1
Q ss_pred cceEEEECCCCCCCCEEEEEEEEcCCCc-----eEEEEEEEEE
Q psy14896 722 FNRILTIPNVKVEDQGEYICRASNDRSA-----LESSVTISIQ 759 (813)
Q Consensus 722 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G~-----~~~~~~l~V~ 759 (813)
....|+|.+++.+|+|.|+|.|.|..+. .+..+.|.|.
T Consensus 155 ~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 155 SRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp CEEEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred ceeEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 2478999999999999999999998762 2566777775
No 207
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.87 E-value=2.7e-22 Score=192.85 Aligned_cols=165 Identities=18% Similarity=0.231 Sum_probs=125.8
Q ss_pred ccccCCCceeccCCCceEEeCCCCCCCccE-EEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecC
Q psy14896 571 FNLKRAPEIGNQNWGKAMFCDPPTNYPGVN-YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSD 649 (813)
Q Consensus 571 ~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~-v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 649 (813)
+...+....+.+|+.++|.|.+ .+.|.+. |.|+|+|..+ .. ..++|.|.+++.+|+|.|+|.|.|...
T Consensus 10 i~~~p~~~~v~~G~~v~L~C~~-~~~p~~~~v~W~k~g~~l--~~-------~~~~L~i~~v~~~D~G~Y~C~a~n~~~- 78 (204)
T 3sgj_C 10 VFLEPQWYRVLEKDSVTLKCQG-AYSPEDQSTQWFHNESLI--SS-------QASSYFIDAATVDDSGEYRCQTQLSTL- 78 (204)
T ss_dssp EEEESCCSEEETTCCEEEEEEC-CSSSSCCCEEEEETTEEE--SC-------CSSEEEESSCCGGGCEEEEEEETTSBC-
T ss_pred EEEcCCCeEEECCCCEEEEEcC-CCCCCCcEEEEEECCEEc--cc-------CccEEEEecccccCCEEEEEEeCCCcc-
Confidence 3344444678899999999999 6777665 9999998652 21 127899999999999999999987432
Q ss_pred ccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CCCeEEEEeCCcccCCCceeeecceEEEE
Q psy14896 650 TGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVPSYNWTRRGSPLPRNAYFENFNRILTI 728 (813)
Q Consensus 650 ~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~p~i~W~k~g~~l~~~~~~~~~~~~L~i 728 (813)
+..+.|.|..+|.+... | ...+.+|++++|.|.+.+. |.+.|+|+|||..+.. ....+.|.|
T Consensus 79 ----s~~~~l~V~~~p~~~~~--~-------~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~----~~~~~~L~i 141 (204)
T 3sgj_C 79 ----SDPVQLEVHIGWLLLQA--P-------RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY----FHHNSDFYI 141 (204)
T ss_dssp ----CCCEEEEEECSSEEEEC--S-------CSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE----EEECCCEEE
T ss_pred ----cccEEEEEecCceEecC--C-------ceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec----ccCCceEEE
Confidence 23467888877643321 1 1457889999999999765 5689999999998643 223678999
Q ss_pred CCCCCCCCEEEEEEEEc-CCCceEEEEEEEEEcCCc
Q psy14896 729 PNVKVEDQGEYICRASN-DRSALESSVTISIQAEPN 763 (813)
Q Consensus 729 ~~v~~~d~G~Y~C~a~N-~~G~~~~~~~l~V~~~P~ 763 (813)
.+++.+|+|.|+|.|.| ..+..+..+.|.|.++|.
T Consensus 142 ~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~ 177 (204)
T 3sgj_C 142 PKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLA 177 (204)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred CcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcCC
Confidence 99999999999999999 445677789999997764
No 208
>1rtm_1 Mannose-binding protein-A; lectin; 1.80A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 PDB: 1kwu_A* 1kwv_A* 1kwt_A* 1kwx_A* 1kwy_A* 1kx1_A* 1kww_A 1kwz_A* 1kx0_A* 3kmb_1* 1kmb_1* 2kmb_1* 4kmb_1* 1afb_1* 1afa_1* 1afd_1 1bch_1* 1bcj_1* 1fif_A 1fih_A*
Probab=99.87 E-value=1.5e-22 Score=182.74 Aligned_cols=121 Identities=12% Similarity=0.053 Sum_probs=106.5
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcC
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~d 107 (813)
.||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||.+++. ..+||||.+...++.|.|.|
T Consensus 27 ~~~~~w~~~~~~Cy~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~WIGl~~~~~~~~w~W~d 100 (149)
T 1rtm_1 27 HAFSMGKKSGKKFFVTNHER-MPFSKVKALCSELRGTVAIPRNAEENKAIQEVAK-----TSAFLGITDEVTEGQFMYVT 100 (149)
T ss_dssp HHHHTTCCTTSCEEEEEEEE-EEHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHS-----SCEEEEEECSSSTTCCEETT
T ss_pred hcCCCeEEeCCEEEEEeCCC-CCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHHhc-----CCEEEEeeccCcCCeEEECC
Confidence 48899999999999999884 9999999999999999999999999999998872 57899999988899999999
Q ss_pred CCCCCccccccCCCCCC-cccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 108 GTNLNELDAAFLPEPAD-NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 108 gs~~~~~~~~~~~~p~~-~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|++++| .+|..++|++ .+.++|+.|.. . ..|.+..|.....|+|+.+
T Consensus 101 g~~~~~-~~W~~g~P~~~~~~~~Cv~~~~-~----g~W~d~~C~~~~~fICe~~ 148 (149)
T 1rtm_1 101 GGRLTY-SNWKKDEPNDHGSGEDCVTIVD-N----GLWNDISCQASHTAVCEFP 148 (149)
T ss_dssp SSBCCS-CCBCTTCCCCCTTCCCEEEECG-G----GCEEEECTTSEEEEEEEEC
T ss_pred CCCccc-cCcCCCCCCCCCCCCCeEEECC-C----CCEeCCCCCCCeeEEEEee
Confidence 999987 6777779987 44689999862 2 2455999999999999984
No 209
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.87 E-value=1.9e-22 Score=189.42 Aligned_cols=169 Identities=20% Similarity=0.243 Sum_probs=128.4
Q ss_pred ecccccccCCCceeccCCCceEEeCCCCCCCcc-EEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEe
Q psy14896 567 FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS 645 (813)
Q Consensus 567 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 645 (813)
.+|.+...+....+.+|+.++|.|.+ .+.|.+ .+.|+|++..+. ..+++|.|.+++.+|+|.|+|.|.|
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~-~~~~~~~~i~W~~~~~~~~---------~~~~~L~i~~v~~~d~G~Y~C~~~~ 72 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNG-NNFFEVSSTKWFHNGSLSE---------ETNSSLNIVNAKFEDSGEYKCQHQQ 72 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCT-TCC----CCEEEETTEECS---------CCSSEEEECSCCGGGCEEEEEECTT
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeC-CCCCCcceEEEEECCeECC---------CCceEEEEeccceecCEEEEEEcCC
Confidence 34555566666678999999999999 566664 699999986532 1356899999999999999999988
Q ss_pred eecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEec-CCCCCeEEEEeCCcccCCCceeeecce
Q psy14896 646 KVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF-GYPVPSYNWTRRGSPLPRNAYFENFNR 724 (813)
Q Consensus 646 ~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~-g~P~p~i~W~k~g~~l~~~~~~~~~~~ 724 (813)
..+. ..+.|.|..++.... .+ ...+.+|++++|.|.+. +.|.|.++|+|+|..+... ..+.
T Consensus 73 ~~~s-----~~~~l~V~~~~~~~~--~~-------~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~----~~~~ 134 (176)
T 1f2q_A 73 VNES-----EPVYLEVFSDWLLLQ--AS-------AEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW----YENH 134 (176)
T ss_dssp SSCC-----CCEEEEEECSSEEEE--ES-------CSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC----CCSS
T ss_pred cccc-----ccEEEEEeCcceeec--CC-------cceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee----cCCC
Confidence 5532 236677774443221 11 14578999999999995 6777899999999988532 2367
Q ss_pred EEEECCCCCCCCEEEEEEEEcCCC-ceEEEEEEEEEcCCc
Q psy14896 725 ILTIPNVKVEDQGEYICRASNDRS-ALESSVTISIQAEPN 763 (813)
Q Consensus 725 ~L~i~~v~~~d~G~Y~C~a~N~~G-~~~~~~~l~V~~~P~ 763 (813)
.|.|.+++.+|+|.|+|.|.|..| ..+..+.|.|.++|.
T Consensus 135 ~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 135 NISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred eEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 899999999999999999999754 456679999999885
No 210
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.87 E-value=1e-22 Score=190.66 Aligned_cols=159 Identities=13% Similarity=0.073 Sum_probs=122.4
Q ss_pred eeccCCCceEEeCC-CCCCCccEEEEccCCCCC--------cccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecC
Q psy14896 579 IGNQNWGKAMFCDP-PTNYPGVNYYWARDYFPN--------FVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSD 649 (813)
Q Consensus 579 ~~~~g~~~~l~C~~-~~~~p~~~v~W~k~~~~~--------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 649 (813)
.+.+|+.++|.|.. +...|.+.|.|+|++..+ ......|+.+..+|+|.|.+++.+|+|.|+|.|.|..|.
T Consensus 7 ~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~g~ 86 (176)
T 1hng_A 7 WGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNGT 86 (176)
T ss_dssp EEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETTCC
T ss_pred EEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCCCC
Confidence 45789999999954 234677899999998532 123467888888899999999999999999999998876
Q ss_pred ccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeeecceEEEEC
Q psy14896 650 TGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIP 729 (813)
Q Consensus 650 ~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~ 729 (813)
.. ....+.|.|..++....+ ...+.+++|.|.+.|.|+|.|+|+|+|.+|..+. .+.|.
T Consensus 87 ~~-~~~~~~l~V~~~~~~p~i-------------~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~-------~~~i~ 145 (176)
T 1hng_A 87 RI-LNKALDLRILEMVSKPMI-------------YWECSNATLTCEVLEGTDVELKLYQGKEHLRSLR-------QKTMS 145 (176)
T ss_dssp EE-EEEEEEEEEECCCCCCEE-------------EEETTTTEEEEECSSCSSCEEEEEETTEEEEEES-------SSEEE
T ss_pred EE-EEEEEEEEEeCCCCCCEE-------------EecCCcEEEEEEecCCCCcEEEEEECCEECCCCC-------cEEEE
Confidence 41 123467777765432211 1224569999999999999999999999886543 24566
Q ss_pred CCCCCCCEEEEEEEEcCCCceEEEEEEEE
Q psy14896 730 NVKVEDQGEYICRASNDRSALESSVTISI 758 (813)
Q Consensus 730 ~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 758 (813)
++..+|+|.|+|.|.|.+|..++.+.|.+
T Consensus 146 ~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 146 YQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp EECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred EEEccCCeEEEEEEEecCCCceecccccC
Confidence 78899999999999999999998887765
No 211
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.87 E-value=1e-21 Score=188.57 Aligned_cols=179 Identities=18% Similarity=0.327 Sum_probs=138.4
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEee-CC---eEEEcCC
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS-GG---NLIINDP 263 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~-~~---~l~i~~~ 263 (813)
.+|.|...|.++.+.+| +++.|.|.+.|.|.+.+.|||++..+. ...++... ++ +|.|.+.
T Consensus 6 ~~P~~~~~~~~~~v~~G-----~~v~l~C~~~~~p~~~v~W~~~~~~~~----------~~~~~~~~~~~~~~~L~i~~~ 70 (197)
T 3lcy_A 6 EAPGIRKEMKDVTTKLG-----EAAQLSCQIVGRPLPDIKWYRFGKELI----------QSRKYKMSSDGRTHTLTVMTE 70 (197)
T ss_dssp EEEEEEECCCCEEEETT-----SEEEEEEEEEEESCCEEEEEETTEEEC----------CCSSEEEEESSSEEEEEEECC
T ss_pred CCCcccccCCceEEeCC-----CcEEEEEEEecCCCCEEEEEECCEECC----------CCccEEEEeCCCEEEEEEecC
Confidence 46889999999998887 669999999999999999999998762 22233322 33 6888885
Q ss_pred ccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccC---CCCceeecCCCeEEEecCCCCCCcceEEEeecccccccc
Q psy14896 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK---RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE 340 (813)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~---~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~ 340 (813)
+.+|+|.|+|.|.|..|.. +..+.|.|...|.+... .....+..|+.+.|.|.+ .+.|.+.+.|++++.++ .
T Consensus 71 -~~~d~G~Y~C~~~n~~~~~-~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~--~ 145 (197)
T 3lcy_A 71 -EQEDEGVYTCIATNEVGEV-ETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMY-IGRPVPAMTWFHGQKLL--Q 145 (197)
T ss_dssp -SGGGCEEEEEEEECSSCEE-EEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEE-EEESCCEEEEEETTEEC--C
T ss_pred -CccCCEEEEEEEECCCCce-eEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEE-eeeeCCeeEEeECCEEC--C
Confidence 8999999999999998876 56788888777765433 233456789999999996 67899999999999874 3
Q ss_pred CCccEEEccC---ccEEEeeeee-cCCeeeEEEEeeeccccCCCCCceeeEEc
Q psy14896 341 EDKRVFVSYD---GALYFSALEQ-IDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389 (813)
Q Consensus 341 ~~~~~~~~~~---~~L~i~~v~~-~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~ 389 (813)
...++.+... +.|.|.++.. +|+|.|+|.|.|..|.... .+.|.|.
T Consensus 146 ~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~---~~~l~V~ 195 (197)
T 3lcy_A 146 NSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDA---ILDVEIQ 195 (197)
T ss_dssp CCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEE---EEEEEEE
T ss_pred CCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEE---EEEEEEe
Confidence 4445554444 4799999995 8999999999999886432 3566654
No 212
>3hup_A Early activation antigen CD69; C-type lectin-like domain, disulfide bond, glycoprotein, LEC membrane, phosphoprotein, signal-anchor, transmembrane; 1.37A {Homo sapiens} SCOP: d.169.1.1 PDB: 1e87_A 1e8i_A 3cck_A
Probab=99.87 E-value=5.6e-22 Score=174.63 Aligned_cols=117 Identities=16% Similarity=0.340 Sum_probs=99.0
Q ss_pred ccCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeE
Q psy14896 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (813)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~ 104 (813)
....||.||..|+++||+|+.. .++|.+|+..|+.+||+||+|++++|++||.+++. ...+||||.+. .++.|.
T Consensus 12 ~~~~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~WIGl~~~-~~~~w~ 85 (130)
T 3hup_A 12 HVSSCSEDWVGYQRKCYFISTV-KRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAG----REEHWVGLKKE-PGHPWK 85 (130)
T ss_dssp CCBCCCTTCEEETTEEEEECSS-CBCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHT----TSCEEEEEEEC-TTSCEE
T ss_pred CCCCCChhheecCCEEEEEECC-ccCHHHHHHHHHhcCCEEeecCCHHHHHHHHHhhC----CCCEEEEEEeC-CCCeEE
Confidence 4567999999999999999998 49999999999999999999999999999999873 35789999984 678999
Q ss_pred EcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 105 NEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 105 W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|+||+++. +|. . ....++|+.|... . |.+..|.....|+|+++
T Consensus 86 W~dg~~~~---~w~-~---~~~~~~Cv~~~~~----~--w~~~~C~~~~~fICe~~ 128 (130)
T 3hup_A 86 WSNGKEFN---NWF-N---VTGSDKCVFLKNT----E--VSSMECEKNLYWICNKP 128 (130)
T ss_dssp ETTSCBCC---CCS-C---CCSSCSEEEEETT----E--EEEECTTSCBEEEEEEE
T ss_pred eCCCCccc---Ccc-C---CCCCCCceEEeCC----C--cccCCCCCCccEEeccC
Confidence 99999843 454 2 2236899998642 3 55999999999999985
No 213
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.87 E-value=3.7e-22 Score=191.54 Aligned_cols=169 Identities=10% Similarity=0.181 Sum_probs=126.7
Q ss_pred eccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEE-eeCccEEEEeecccCCeeEEEEEEeeecCccccCceee
Q psy14896 580 GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFV-SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 658 (813)
Q Consensus 580 ~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~ 658 (813)
+.+|+.++|.|.+ .|.|.+.|.|+++... .+ ..+... ..+++|.|.+++.+|+|.|+|.|.|..|.. ...+.
T Consensus 13 ~~~G~~v~L~C~~-~g~P~p~i~W~~~~~~-~~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~---~~~~~ 85 (202)
T 1vca_A 13 AQIGDSVSLTCST-TGCESPFFSWRTQIDS-PL--NGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKL---EKGIQ 85 (202)
T ss_dssp EETTSCEEEEEEE-ESCSSCEEEEEETTCC-CC--SSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEE---EEEEE
T ss_pred EcCCCcEEEEEee-cCCCCCeEEEECCCCC-Cc--cceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceE---eeEEE
Confidence 3489999999999 7899999999984321 01 122222 234569999999999999999999987653 33578
Q ss_pred EEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCC---CeEEEEeCCcccCCCcee--------eecceEEE
Q psy14896 659 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV---PSYNWTRRGSPLPRNAYF--------ENFNRILT 727 (813)
Q Consensus 659 l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~---p~i~W~k~g~~l~~~~~~--------~~~~~~L~ 727 (813)
|.|..+|....+.. ...+.+|+.++|.|.+.|.|+ +.|+|+|+|..|...... ......|.
T Consensus 86 l~V~~~p~~~~~~~--------~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~ 157 (202)
T 1vca_A 86 VEIYSFPKDPEIHL--------SGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVT 157 (202)
T ss_dssp EEEEBCCSCCEEEE--------SSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEE
T ss_pred EEEEeCCCCCEeCC--------ceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEE
Confidence 89988776544321 145789999999999998643 379999999987543211 12234578
Q ss_pred ECCCCCCCCEEEEEEEEcCCCc-------eEEEEEEEEEcCCc
Q psy14896 728 IPNVKVEDQGEYICRASNDRSA-------LESSVTISIQAEPN 763 (813)
Q Consensus 728 i~~v~~~d~G~Y~C~a~N~~G~-------~~~~~~l~V~~~P~ 763 (813)
|..+..+|+|.|+|+|.|.+|. .+.++.|.|..||.
T Consensus 158 i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 158 FTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp ECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred EEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 9988889999999999999886 46789999999986
No 214
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.87 E-value=9.4e-22 Score=186.03 Aligned_cols=175 Identities=17% Similarity=0.254 Sum_probs=134.1
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEee----CCeEEEcCCc
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS----GGNLIINDPR 264 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~ 264 (813)
+|.|+..|.+..+.+| +++.|.|.+.|.|.+.+.|+|+|..+.... ..+.... .++|.|.+.
T Consensus 2 ~~~~~~~p~~~~v~~G-----~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~--------~~~~~~~~~~~~~~L~i~~~- 67 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQG-----QPVKLNCSVEGMEEPDIQWVKDGAVVQNLD--------QLYIPVSEQHWIGFLSLKSV- 67 (182)
T ss_dssp -----CCCEEEEEETT-----CCEEEEEEEESCSSCCEEEEETTEECCSSE--------EEEEEEETTEEEEEEEESSC-
T ss_pred CCEEEeCCcceEEeCC-----CcEEEEEEEeCCCCCeEEEEECCeecCCCC--------ceEEEecCCCceEEEEEeec-
Confidence 4678888899888887 669999999999999999999998763211 1111122 256788875
Q ss_pred cccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEEeeccccccccCCc
Q psy14896 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPNFVEEDK 343 (813)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~k~~~~~~~~~~~ 343 (813)
+.+|+|.|+|.|.|..|...+..+.|.|..+|.+...+....+.+|+.+.|.|.+ .|.|.+ .+.|++++..+... .
T Consensus 68 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~~v~W~~~~~~~~~~--~ 144 (182)
T 1rhf_A 68 ERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEA-VGPPEPVTIVWWRGTTKIGGP--A 144 (182)
T ss_dssp CGGGCEEEEEEESSCTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEE-ECSSSCCEEEEEETTEECSCS--E
T ss_pred CcccCeEEEEEEEcCCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEe-cCCCCCCEEEEEcCCeECCCC--C
Confidence 8999999999999998876678899999988888777777788999999999996 678998 99999999874221 1
Q ss_pred cEEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEE
Q psy14896 344 RVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388 (813)
Q Consensus 344 ~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v 388 (813)
...+.|.|.++ +|+|.|+|.|.|..|... +..+.|.|
T Consensus 145 ----~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~--s~~~~l~V 181 (182)
T 1rhf_A 145 ----PSPSVLNVTGV--TQSTMFSCEAHNLKGLAS--SRTATVHL 181 (182)
T ss_dssp ----ESSEEEEECCC--SSCEEEEEEEEETTEEEE--CCCEEEEE
T ss_pred ----CCceEEEEecc--ccCeEEEEEEECCCCCcc--cceEEEEe
Confidence 15568999998 599999999999988542 23366665
No 215
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.87 E-value=2.2e-22 Score=196.43 Aligned_cols=184 Identities=23% Similarity=0.271 Sum_probs=135.6
Q ss_pred ecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCC-CeEEEeeCccE----EEEeecccCCeeEEE
Q psy14896 567 FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEED-KRVFVSYDGAL----YFSALEQIDAGNYSC 641 (813)
Q Consensus 567 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~-~~~~~~~~~~L----~i~~~~~~d~G~Y~C 641 (813)
.+|.+...+....+.+|+.++|.|.+ .+.|.+.|.|+|+|.++..... .......++.+ .|.+++.+|+|.|+|
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~-~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKV-EGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEE-ECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEE
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEc-CCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEE
Confidence 34556566667778899999999999 7889999999999976543321 12222334443 688999999999999
Q ss_pred EEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEe-cCCCCCeEEEEeCCcccCCCc---
Q psy14896 642 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-FGYPVPSYNWTRRGSPLPRNA--- 717 (813)
Q Consensus 642 ~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~-~g~P~p~i~W~k~g~~l~~~~--- 717 (813)
.|.|..|..... .+.|.|...+..... ......+.+|+.++|.|.+ .|.|.|.|+|+|+|..+....
T Consensus 87 ~~~n~~g~~~~~--~~~l~v~~~~~~~~~-------~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~ 157 (217)
T 2vr9_A 87 VAKNRVGQAVSR--HASLQIAVLRDDFRV-------EPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMS 157 (217)
T ss_dssp EEEETTEEEECC--CEEEEECEECCSCSB-------CCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC-
T ss_pred EEecCCCccccc--cceEEEEEeCCCcEE-------CCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccc
Confidence 999988754332 345666543221111 1223567899999999999 899999999999999887322
Q ss_pred -----ee-eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEc
Q psy14896 718 -----YF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 760 (813)
Q Consensus 718 -----~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 760 (813)
++ ....+.|.|.+++.+|+|.|+|.|.|..|..+.++.+.+..
T Consensus 158 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 158 FGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp --CCCSEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred cccCCcEEecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEE
Confidence 21 22356899999999999999999999999988776666653
No 216
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.87 E-value=9.3e-22 Score=187.48 Aligned_cols=177 Identities=20% Similarity=0.351 Sum_probs=135.3
Q ss_pred CCceeeCCCceeecC-CCccccccEEEEeeeccCCC--CeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcc
Q psy14896 189 GPYFIKQPTDVVFDL-SKRSILNDITLSCYAGGYPN--PSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQ 265 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~-g~~~~g~~v~l~C~~~g~P~--p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 265 (813)
||.|... ....+.+ | +++.|.|.+.+.|. +.+.|+|+|..+.. + +....+++|.|.+. +
T Consensus 3 ~P~i~~~-~~~~v~~~G-----~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~----------~-~~~~~~~~L~i~~~-~ 64 (190)
T 2wv3_A 3 EPRIVTS-EEVIIRDSL-----LPVTLQCNLTSSSHTLMYSYWTKNGVELTA----------T-RKNASNMEYRINKP-R 64 (190)
T ss_dssp CCEEEEC-CCEECCCSS-----SCEEEEEEEEECSSCEEEEEEEETTEECTT----------C-CBCCSEEEEEESSC-C
T ss_pred CCccccc-ceEEEccCC-----ceEEEEEEeccCCCCceEEEEEECCEECcc----------c-ceEeccEEEEEecC-C
Confidence 5777774 4455444 4 77999999998887 89999999987632 1 11124567888885 8
Q ss_pred ccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEee--ccccccc-cCC
Q psy14896 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWAR--DYFPNFV-EED 342 (813)
Q Consensus 266 ~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k--~~~~~~~-~~~ 342 (813)
.+|+|.|+|.|.|. |.. +..+.|.|..+|.+........+.+|+.+.|.|.+ .|.|.+.+.|++ ++.++.. ...
T Consensus 65 ~~d~G~Y~C~~~n~-~~~-~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~-~g~p~p~i~W~~~~~g~~~~~~~~~ 141 (190)
T 2wv3_A 65 AEDSGEYHCVYHFV-SAP-KANATIEVKAAPDITGHKRSENKNEGQDAMMYCKS-VGYPHPEWMWRKKENGVFEEISNSS 141 (190)
T ss_dssp GGGCEEEEEEEEET-TEE-EEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEE-ECSSCCEEEEEEEETTEEEECCCTT
T ss_pred cccCEEEEEEEEeC-Ccc-cccEEEEEecCCcccccCCcceeeCCCcEEEEEEe-CccCCCceEEEEcCCCceeeeecCC
Confidence 99999999999998 655 77889999888887777777788999999999996 788999999999 5655322 144
Q ss_pred ccEEEccCc---cEEEeeee-ecCCeeeEEEEeeeccccCCCCCceeeEEc
Q psy14896 343 KRVFVSYDG---ALYFSALE-QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389 (813)
Q Consensus 343 ~~~~~~~~~---~L~i~~v~-~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~ 389 (813)
.++.+..++ +|.|.++. .+|+|.|+|.|.|..|.... .+.|.|.
T Consensus 142 ~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~---~~~l~V~ 189 (190)
T 2wv3_A 142 GRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASV---STVLRVR 189 (190)
T ss_dssp SCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEE---EEEEEEE
T ss_pred CeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCccee---EEEEEEE
Confidence 555555443 79999999 79999999999999886433 2555553
No 217
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.87 E-value=5.6e-22 Score=187.86 Aligned_cols=160 Identities=15% Similarity=0.247 Sum_probs=127.0
Q ss_pred ceeccCCCceEEeCCCCCCCccEEEEccCCCCCccc------------CCCeEEEe----e--CccEEEEeecccCCeeE
Q psy14896 578 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE------------EDKRVFVS----Y--DGALYFSALEQIDAGNY 639 (813)
Q Consensus 578 ~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~------------~~~~~~~~----~--~~~L~i~~~~~~d~G~Y 639 (813)
..+.+|+.++|.|.+ .+.|.+.+.|+|++...... ...++... . +.+|.|.+++.+|+|.|
T Consensus 5 v~~~~G~~v~L~C~~-~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 5 VLGKKGDTVELTCTA-SQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEETTSCEEECCBC-SSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred EEEeCCCCEEEEEEE-cCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 456789999999999 58899999999998632221 12334433 2 23499999999999999
Q ss_pred EEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCcee
Q psy14896 640 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 719 (813)
Q Consensus 640 ~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~ 719 (813)
+|.|.|..|. +.|.|...+ .+. ...+.+|++++|.|.+.+.|.|.++|+++|..+
T Consensus 84 ~C~~~~~~~~-------~~l~V~~~~------~~~------~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~------ 138 (184)
T 2ny1_B 84 ICEVEDQKEE-------VQLLVFGLT------ANS------DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN------ 138 (184)
T ss_dssp EEEETTEEEE-------EEEEEEEEE------ESS------CSEEETTCCEEEEEECCTTCCCEEEEECTTSCE------
T ss_pred EEEEEcCCCc-------EEEEEEEec------CCC------CceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc------
Confidence 9999998752 455655311 111 145789999999999999999999999998765
Q ss_pred eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCc
Q psy14896 720 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPN 763 (813)
Q Consensus 720 ~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~ 763 (813)
......|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.+.|.
T Consensus 139 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~ 182 (184)
T 2ny1_B 139 IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK 182 (184)
T ss_dssp EEESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC
T ss_pred ccCceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCC
Confidence 23467899999999999999999999999999999999998875
No 218
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.87 E-value=2.1e-21 Score=188.20 Aligned_cols=194 Identities=21% Similarity=0.311 Sum_probs=145.7
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccc--cccccCCCccEEeeCCeEEEcCCccc
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVA--NLIDPLSDKRFTLSGGNLIINDPRQV 266 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~ 266 (813)
++.|...|..+.+.+| +++.|.|.+.|.|.+.|.|+|++..+..... ..+......++...+++|.|.+. +.
T Consensus 4 ~~~i~~~~~~~~v~~G-----~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~-~~ 77 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPEN-----NPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSV-TR 77 (209)
T ss_dssp CCEEECSCSBCCEETT-----CCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCC-CT
T ss_pred eEEEEcCCCceEEEcC-----CCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeC-CH
Confidence 4566677788888777 6699999999999999999999976421110 01122344566667788988885 89
Q ss_pred cCCeeEEEEeecCcee-eEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCC---
Q psy14896 267 EDRGSYHCKASNKFGS-IISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEED--- 342 (813)
Q Consensus 267 ~d~G~Y~C~a~n~~g~-~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~--- 342 (813)
+|+|.|+|.|.|..|. ..+..+.|.|..+|.+.....+..+.+|+.++|.|.+..+.|.+.+.|++++.++.....
T Consensus 78 ~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~ 157 (209)
T 1nbq_A 78 EDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTR 157 (209)
T ss_dssp TSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSS
T ss_pred HHCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccce
Confidence 9999999999998652 235678888888887776666778899999999999768999999999999987543322
Q ss_pred ----ccEEEc-cCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEc
Q psy14896 343 ----KRVFVS-YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389 (813)
Q Consensus 343 ----~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~ 389 (813)
.++.+. ..+.|.|.++..+|+|.|+|.|.|..|.. ..+..+.|.|.
T Consensus 158 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~s~~v~l~V~ 208 (209)
T 1nbq_A 158 AFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTP-MTSNAVRMEAV 208 (209)
T ss_dssp SCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCC-EECCCBCCEEE
T ss_pred eeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcc-cccccEEEEEe
Confidence 122222 35689999999999999999999998864 22344566553
No 219
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.87 E-value=2.7e-22 Score=193.32 Aligned_cols=173 Identities=14% Similarity=0.158 Sum_probs=127.2
Q ss_pred CCceeccCCCceEEeCCCCCCCc-----cEEEEccCCCCCcccCCCeEEEeeC------ccEEEEeecccCCeeEEEEEE
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYPG-----VNYYWARDYFPNFVEEDKRVFVSYD------GALYFSALEQIDAGNYSCNVQ 644 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p~-----~~v~W~k~~~~~~~~~~~~~~~~~~------~~L~i~~~~~~d~G~Y~C~a~ 644 (813)
.+..+.+|+.++|.|.+ .+.|. +.|.|+|++... .....++.+..+ ++|.|.+++.+|+|.|+|.|.
T Consensus 10 ~~v~v~~G~~v~L~C~~-~~~p~~~~~~~~v~W~k~~~~~-~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 87 (202)
T 3bp6_B 10 EVYTVDVGSSVSLECDF-DRRECTELEGIRASLQKVENDT-SLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVI 87 (202)
T ss_dssp SEEEEETTSCEEEEEEE-CTTC---CTTEEEEEEECC--C-CCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred cCEEEeCCCcEEEEEEe-cCCCCCCccceEEEEEcCCCcc-cccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEE
Confidence 34567889999999999 67776 899999943322 233345555443 569999999999999999999
Q ss_pred eeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeeec--
Q psy14896 645 SKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENF-- 722 (813)
Q Consensus 645 n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~-- 722 (813)
|..|.. ...+.|.|..++....+.. ..+.+|+.++|.|.+.|.|.|.|+|++++..+.........
T Consensus 88 ~~~~~~---~~~~~l~V~~~~~~p~~~~---------~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~ 155 (202)
T 3bp6_B 88 CGAAWD---YKYLTVKVKASYMRIDTRI---------LEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGL 155 (202)
T ss_dssp ETTEEE---EEEEEEEEEBCCCCEEEEE---------EECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEECTTSC
T ss_pred eCCCcc---eEEEEEEecCCCCcccEEE---------EecCCCCeEEEEEEccccCCceEEEEeCCCCccCceeeCCCCC
Confidence 987654 3347788876653322211 24578999999999999999999999998876432222111
Q ss_pred ceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCC
Q psy14896 723 NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 762 (813)
Q Consensus 723 ~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 762 (813)
...+.|.++..+|+|.|+|.|.|..|..+..+.|.|..+.
T Consensus 156 ~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~~ 195 (202)
T 3bp6_B 156 YQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSRM 195 (202)
T ss_dssp EEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC----
T ss_pred EEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEecCcC
Confidence 2567788999999999999999999999999999887553
No 220
>1fm5_A Early activation antigen CD69; C-type lectin-like domain, natural killer cell receptor, lectin, C-type lectin, immune system; 2.27A {Homo sapiens} SCOP: d.169.1.1
Probab=99.87 E-value=4.7e-22 Score=187.94 Aligned_cols=118 Identities=16% Similarity=0.333 Sum_probs=98.1
Q ss_pred cccCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCe
Q psy14896 24 ELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLW 103 (813)
Q Consensus 24 ~~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~ 103 (813)
.....||.||..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||.+++. ...+||||.+.. ++.|
T Consensus 80 ~~~~~Cp~gW~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~----~~~~WIGl~~~~-~~~w 153 (199)
T 1fm5_A 80 SHVSSCSEDWVGYQRKCYFISTVK-RSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAG----REEHWVGLKKEP-GHPW 153 (199)
T ss_dssp C----CCTTSEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHC----SSCEEEEEECCT-TSCC
T ss_pred CCCCCCCCCcEEECCEEEEEeCCc-cCHHHHHHHHhhcCCEEEecCCHHHHHHHHHhhC----CCCEEeeeEECC-CCCe
Confidence 345679999999999999999984 9999999999999999999999999999999873 357999999987 8999
Q ss_pred EEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 104 VNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 104 ~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.|.||+++. +|. + ..+.++|+.|.. + .| .+..|.....|+|+..
T Consensus 154 ~W~DGs~~~---~W~-~---~~~~~~Cv~l~~--~--~W--~d~~C~~~~~fICe~~ 197 (199)
T 1fm5_A 154 KWSNGKEFN---NWF-N---VTGSDKCVFLKN--T--EV--SSMECEKNLYWICNKP 197 (199)
T ss_dssp EETTSCBCC---CSS-C---CCSSSSEEEECS--S--CE--EEECTTSCBEEEEEEE
T ss_pred EECCCCccc---ccc-C---CCCCCCceEEEC--C--CE--EEecCCCCEEEEcccc
Confidence 999999753 454 1 234689999854 2 34 5999999999999984
No 221
>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1
Probab=99.86 E-value=2.7e-22 Score=184.51 Aligned_cols=121 Identities=12% Similarity=0.063 Sum_probs=106.8
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcC
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~d 107 (813)
.||.+|..|+++||+|+.. .++|.+|+..|+.+||+||+|+|++|++||.+++. ..+||||++...++.|.|.|
T Consensus 46 ~~~~~~~~~~~~Cy~~~~~-~~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~WIGl~d~~~~g~w~W~d 119 (168)
T 1buu_A 46 HAFSMGKKSGKKFFVTNHE-RMPFSKVKALCSELRGTVAIPRNAEENKAIQEVAK-----TSAFLGITDEVTEGQFMYVT 119 (168)
T ss_dssp HHHHTTCCTTSCEEEEEEE-EECHHHHHHHHHHTTSEECCCCSHHHHHHHHHHHC-----SCEECSEECSSSTTCCEETT
T ss_pred ccCCCeEEECCEEEEEeCC-ccCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHHhc-----CCEEeeeecCCcCCCEEeCC
Confidence 4899999999999999988 49999999999999999999999999999998872 67999999988899999999
Q ss_pred CCCCCccccccCCCCCC-cccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 108 GTNLNELDAAFLPEPAD-NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 108 gs~~~~~~~~~~~~p~~-~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|++++| .+|..++|++ .+.++|+.|. .. ..|.+..|.....|+|+..
T Consensus 120 G~~~~y-~~W~~geP~~~~~~e~Cv~~~-~~----g~W~d~~C~~~~~~ICe~~ 167 (168)
T 1buu_A 120 GGRLTY-SNWKKDEPNDHGSGEDCVTIV-DN----GLWNDISCQASHTAVCEFP 167 (168)
T ss_dssp SSBCSC-CCBSSSSCCCTTSCCCEEEEC-TT----SCEEEECTTSCEEEEEEEC
T ss_pred CCCcCC-CCCCCCCCCCCCCCCCeEEEC-CC----CCEEccCCCCCEEEEEEec
Confidence 999987 6777779987 3468999986 22 2455999999999999974
No 222
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.86 E-value=6.3e-22 Score=185.64 Aligned_cols=165 Identities=19% Similarity=0.227 Sum_probs=126.3
Q ss_pred ccccccCCCceeccCCCceEEeCCCCCCCccE-EEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeee
Q psy14896 569 GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVN-YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKV 647 (813)
Q Consensus 569 p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~-v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 647 (813)
|.+...+....+.+|+.++|.|.+ .+.|.+. +.|+|++..+. ..+++|.|.+++.+|+|.|+|.|.|..
T Consensus 8 p~i~~~p~~~~v~~G~~v~L~C~~-~~~p~~~~~~W~~~~~~~~---------~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 77 (175)
T 1fnl_A 8 AVVFLEPQWYSVLEKDSVTLKCQG-AYSPEDNSTQWFHNESLIS---------SQASSYFIDAATVNDSGEYRCQTNLST 77 (175)
T ss_dssp CEEEEESCCSEEETTCCEEEEEEC-CCBTTBCCCEEEETTEEEE---------SSCSEEEESSCCGGGCEEEEEECSSSC
T ss_pred CEEEEcCCceeeeCCCcEEEEeeC-CCCCCCcceEEEECCEEcc---------CCceEEEEeCCCcccCEEEEEEeeCCc
Confidence 344444555678899999999999 6767665 89999986421 245689999999999999999999854
Q ss_pred cCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCC-eEEEEeCCcccCCCceeeecceEE
Q psy14896 648 SDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP-SYNWTRRGSPLPRNAYFENFNRIL 726 (813)
Q Consensus 648 g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p-~i~W~k~g~~l~~~~~~~~~~~~L 726 (813)
+ ...+.|.|..++.... .+ ...+.+|+.++|.|.+.+.|++ .|+|+|+|..+.. ......|
T Consensus 78 ~-----s~~~~l~V~~~~~~~~--~~-------~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~----~~~~~~L 139 (175)
T 1fnl_A 78 L-----SDPVQLEVHIGWLLLQ--AP-------RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY----FHHNSDF 139 (175)
T ss_dssp C-----CCCEEEEEECSSEEEE--CS-------CSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE----EEECCCE
T ss_pred c-----cccEEEEEeCCCceee--CC-------CceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC----CCCCCEE
Confidence 3 2346777775443221 11 1457899999999999988765 9999999998743 2336789
Q ss_pred EECCCCCCCCEEEEEEEEcCCCc-eEEEEEEEEEcC
Q psy14896 727 TIPNVKVEDQGEYICRASNDRSA-LESSVTISIQAE 761 (813)
Q Consensus 727 ~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~V~~~ 761 (813)
.|.+++.+|+|.|+|.|.|..|. .+..+.|.|.+|
T Consensus 140 ~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~ 175 (175)
T 1fnl_A 140 HIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQA 175 (175)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECC
T ss_pred EEcccChhhCeEEEEEEEcCCCCccCccEEEEEeCC
Confidence 99999999999999999997664 667888888764
No 223
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.86 E-value=2.2e-22 Score=201.71 Aligned_cols=201 Identities=16% Similarity=0.161 Sum_probs=118.4
Q ss_pred CCCCCceEEEEEEcCceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCC-----ccEEEEccCC--CCC
Q psy14896 538 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP-----GVNYYWARDY--FPN 610 (813)
Q Consensus 538 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-----~~~v~W~k~~--~~~ 610 (813)
+.+|+|.|+|.|. |..... ..+.+..++.+...+....+.+|+.++|.|.+ .+.| .+.|.|+|++ ...
T Consensus 12 ~~~dsg~Y~C~a~---g~~~~~-~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~k~~~g~~~ 86 (254)
T 2c1o_A 12 RPGTSVKLSCKAS---GYSFTN-YWMNWLRELVMTQSPLTLSVTIGQPASISCKS-SQSLLYSNGKTYLNWLLQRPGQSP 86 (254)
T ss_dssp ------------------------------CCCEEEECSEEEECTTSCEEEEEEE-SSCCBCSSSCBCEEEEEECTTSCC
T ss_pred cCCccEEEEEcCc---hhhhhh-hhhheeeceeEEeCCceEEecCCCcEEEEeec-cCcccccCCCCceEEEEeCCCCCc
Confidence 7899999999998 443332 33333334555555666778999999999999 5666 4899999853 221
Q ss_pred c----------ccCCCeEEEeeCc---cEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCC
Q psy14896 611 F----------VEEDKRVFVSYDG---ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFP 677 (813)
Q Consensus 611 ~----------~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~ 677 (813)
. .....++.+..++ +|.|.+++.+|+|.|+|.|.|..+..... ...|.|...+....+.+
T Consensus 87 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~--~~~l~V~~~~~~P~v~~----- 159 (254)
T 2c1o_A 87 KRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGA--GTKLELKRADAAPTVSI----- 159 (254)
T ss_dssp EEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBC--CEEEEECCCCBCCEEEE-----
T ss_pred eEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecC--CEEEEECCCCCCCeeEe-----
Confidence 0 1123566655443 69999999999999999999876532111 23566654221111111
Q ss_pred CCCCcCCCCCCeEEEEEEecCC-CC-CeEEEEeCCcccCCC-ce-ee---------ecceEEEECCCCCCCCEEEEEEEE
Q psy14896 678 KTFPEAPKAGDKVRLECVAFGY-PV-PSYNWTRRGSPLPRN-AY-FE---------NFNRILTIPNVKVEDQGEYICRAS 744 (813)
Q Consensus 678 ~~~~~~~~~G~~v~l~C~~~g~-P~-p~i~W~k~g~~l~~~-~~-~~---------~~~~~L~i~~v~~~d~G~Y~C~a~ 744 (813)
......+..|+.++|.|.+.|. |+ +.|+|+|||.++..+ .. .. ...+.|.|.++..+|+|.|+|.|.
T Consensus 160 ~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~ 239 (254)
T 2c1o_A 160 FPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEAT 239 (254)
T ss_dssp ECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred ecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEE
Confidence 0001223358899999999984 44 469999999988766 11 10 114579999999999999999999
Q ss_pred cCCCce
Q psy14896 745 NDRSAL 750 (813)
Q Consensus 745 N~~G~~ 750 (813)
|.....
T Consensus 240 n~~~~~ 245 (254)
T 2c1o_A 240 HKTSTS 245 (254)
T ss_dssp CTTCSS
T ss_pred cCCCCC
Confidence 987654
No 224
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.86 E-value=4.6e-22 Score=188.91 Aligned_cols=179 Identities=14% Similarity=0.118 Sum_probs=123.0
Q ss_pred cccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecC
Q psy14896 570 EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSD 649 (813)
Q Consensus 570 ~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 649 (813)
.+...+.. .+.+|++++|.|.+ .+ +.+.+.|+|+|.++............+++|.|.+++.+|+|.|+|.|.|..|.
T Consensus 6 ~i~~~p~~-~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~ 82 (188)
T 1oll_A 6 FIWAEPHF-MVPKEKQVTICCQG-NY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELW 82 (188)
T ss_dssp EEEEESCS-EEETTCCEEEEEEC-CT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred EEEeecCC-cCCCCCCEEEEEec-CC-CCCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCCC
Confidence 33333333 67889999999998 44 45789999998753211111111123457999999999999999999986543
Q ss_pred ccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeeecceEEEEC
Q psy14896 650 TGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIP 729 (813)
Q Consensus 650 ~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~ 729 (813)
.. .+..+.|.|........+..+ . ...+.+|++++|.|.+.+. .+.+.|+|+|..+............|.|.
T Consensus 83 ~~-~s~~~~l~V~~~~~~p~i~~~-----p-~~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~L~I~ 154 (188)
T 1oll_A 83 SE-PSNLLDLVVTEMYDTPTLSVH-----P-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQRGYGKVQAEFPLG 154 (188)
T ss_dssp CC-CCCCEEEEEESCSCCCEEEEE-----S-CSEEETTCEEEEEEECSSS-CSEEEEEEESSSCEEEEEECSSEEEEEEE
T ss_pred CC-CCCceEEEecccCCCCeEEEC-----C-CCccccCCEEEEEEEcCCC-CCEEEEEECCccccccccCCCceeEEEEC
Confidence 22 233466777642211111111 1 1457899999999999774 57999999998876432333446789999
Q ss_pred CCCCCCCEEEEEEEEcCCC---ceEEEEEEEEE
Q psy14896 730 NVKVEDQGEYICRASNDRS---ALESSVTISIQ 759 (813)
Q Consensus 730 ~v~~~d~G~Y~C~a~N~~G---~~~~~~~l~V~ 759 (813)
+++.+|+|.|+|.|.|... ..+..+.|.|.
T Consensus 155 ~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 155 PVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp ECCGGGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred CCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 9999999999999998752 34556777775
No 225
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.86 E-value=3.7e-21 Score=180.42 Aligned_cols=167 Identities=14% Similarity=0.182 Sum_probs=128.8
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCe-EEEeecccccccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPS-YEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~-v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
+|.|...|....+.+| ++++|.|.+.+.|.+. +.|||+|..+. ..+++|.|.+. +.+
T Consensus 7 ~p~i~~~p~~~~v~~G-----~~v~L~C~~~~~p~~~~~~W~~~~~~~~----------------~~~~~L~i~~~-~~~ 64 (175)
T 1fnl_A 7 KAVVFLEPQWYSVLEK-----DSVTLKCQGAYSPEDNSTQWFHNESLIS----------------SQASSYFIDAA-TVN 64 (175)
T ss_dssp CCEEEEESCCSEEETT-----CCEEEEEECCCBTTBCCCEEEETTEEEE----------------SSCSEEEESSC-CGG
T ss_pred CCEEEEcCCceeeeCC-----CcEEEEeeCCCCCCCcceEEEECCEEcc----------------CCceEEEEeCC-Ccc
Confidence 5889999988788777 6699999999988776 89999997652 12567888885 899
Q ss_pred CCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEE
Q psy14896 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFV 347 (813)
Q Consensus 268 d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~ 347 (813)
|+|.|+|.|.|..+ +..+.|.|..++ +.+......+.+|+.++|.|.+..+.|.+.+.|+|+|.++.. .
T Consensus 65 d~G~Y~C~~~n~~~---s~~~~l~V~~~~-~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~-------~ 133 (175)
T 1fnl_A 65 DSGEYRCQTNLSTL---SDPVQLEVHIGW-LLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY-------F 133 (175)
T ss_dssp GCEEEEEECSSSCC---CCCEEEEEECSS-EEEECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE-------E
T ss_pred cCEEEEEEeeCCcc---cccEEEEEeCCC-ceeeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC-------C
Confidence 99999999998655 556777776433 333344567789999999999755555679999999987421 2
Q ss_pred ccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEcc
Q psy14896 348 SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP 390 (813)
Q Consensus 348 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~ 390 (813)
..++.|.|.+++.+|+|.|+|.|.|..+. ..+..+.|.|..
T Consensus 134 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~--~~s~~~~l~V~~ 174 (175)
T 1fnl_A 134 HHNSDFHIPKATLKDSGSYFCRGLVGSKN--VSSETVNITITQ 174 (175)
T ss_dssp EECCCEEESSCCGGGCEEEEEEEEETTEE--EECCCEEEEEEC
T ss_pred CCCCEEEEcccChhhCeEEEEEEEcCCCC--ccCccEEEEEeC
Confidence 24578999999999999999999997653 234457777753
No 226
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.86 E-value=2.8e-21 Score=185.65 Aligned_cols=170 Identities=14% Similarity=0.172 Sum_probs=130.6
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCe-EEEeecccccccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPS-YEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~-v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
+|.|...|.+..+.+| ++++|.|.+.+.|.+. |.|||+|..+.. . .++|.|.+. +.+
T Consensus 7 ~p~i~~~p~~~~v~~G-----~~v~L~C~~~~~p~~~~v~W~k~g~~l~~----------~------~~~L~i~~v-~~~ 64 (204)
T 3sgj_C 7 KAVVFLEPQWYRVLEK-----DSVTLKCQGAYSPEDQSTQWFHNESLISS----------Q------ASSYFIDAA-TVD 64 (204)
T ss_dssp BCEEEEESCCSEEETT-----CCEEEEEECCSSSSCCCEEEEETTEEESC----------C------SSEEEESSC-CGG
T ss_pred CCeEEEcCCCeEEECC-----CCEEEEEcCCCCCCCcEEEEEECCEEccc----------C------ccEEEEecc-ccc
Confidence 4788888888777777 6799999999988775 999999986521 1 267888885 899
Q ss_pred CCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEE
Q psy14896 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFV 347 (813)
Q Consensus 268 d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~ 347 (813)
|+|.|+|.|.|... +..+.|.|...+.+.. .....+.+|+.++|.|.+..+.|.+++.|+|||..+.. .
T Consensus 65 D~G~Y~C~a~n~~~---s~~~~l~V~~~p~~~~-~~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~-------~ 133 (204)
T 3sgj_C 65 DSGEYRCQTQLSTL---SDPVQLEVHIGWLLLQ-APRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY-------F 133 (204)
T ss_dssp GCEEEEEEETTSBC---CCCEEEEEECSSEEEE-CSCSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE-------E
T ss_pred CCEEEEEEeCCCcc---cccEEEEEecCceEec-CCceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec-------c
Confidence 99999999998543 5678888876654433 33467788999999999766667899999999986421 2
Q ss_pred ccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCc
Q psy14896 348 SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 393 (813)
Q Consensus 348 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~ 393 (813)
..++.|.|.+++.+|+|.|+|.|.|..+ ...+..+.|.|..++.
T Consensus 134 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~~--~~~s~~~~l~V~~~~~ 177 (204)
T 3sgj_C 134 HHNSDFYIPKATLKDSGSYFCRGLVGSK--NVSSETVQITITQGLA 177 (204)
T ss_dssp EECCCEEESSCCGGGCEEEEEEEEETTE--EEECCCEEEEEEC---
T ss_pred cCCceEEECcCCcccCEEEEEEEEeCCC--ceecCcEEEEEeCcCC
Confidence 3466899999999999999999999543 2345568888876543
No 227
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.86 E-value=1.3e-21 Score=183.69 Aligned_cols=169 Identities=18% Similarity=0.212 Sum_probs=129.9
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCC-eEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNP-SYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p-~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
+|.|...|....+.+| ++++|.|.+.+.|.+ .+.|||+|..+. . .+++|.|.+. +.+
T Consensus 4 ~P~i~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~~i~W~~~~~~~~----------~------~~~~L~i~~v-~~~ 61 (176)
T 1f2q_A 4 KPKVSLNPPWNRIFKG-----ENVTLTCNGNNFFEVSSTKWFHNGSLSE----------E------TNSSLNIVNA-KFE 61 (176)
T ss_dssp CCCCEEESSCSEEETT-----CCEEEECCTTCC----CCEEEETTEECS----------C------CSSEEEECSC-CGG
T ss_pred CCEEEcCCCCcceecC-----CcEEEEEeCCCCCCcceEEEEECCeECC----------C------CceEEEEecc-cee
Confidence 6888889988888777 669999999998875 799999997652 1 2567888885 899
Q ss_pred CCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEE
Q psy14896 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFV 347 (813)
Q Consensus 268 d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~ 347 (813)
|+|.|+|.|.|..+ +..+.|.|.. +.+.+......+.+|+.++|.|.+..+.|.+.+.|+|||.++...
T Consensus 62 d~G~Y~C~~~~~~~---s~~~~l~V~~-~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~------- 130 (176)
T 1f2q_A 62 DSGEYKCQHQQVNE---SEPVYLEVFS-DWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW------- 130 (176)
T ss_dssp GCEEEEEECTTSSC---CCCEEEEEEC-SSEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC-------
T ss_pred cCEEEEEEcCCccc---cccEEEEEeC-cceeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee-------
Confidence 99999999998765 4567777763 333344455678899999999997667888999999999875221
Q ss_pred ccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCC
Q psy14896 348 SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS 392 (813)
Q Consensus 348 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~ 392 (813)
..++.|.|.++..+|+|.|+|.|.|..+. ..+..+.|.|..+|
T Consensus 131 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~--~~s~~~~l~V~~~p 173 (176)
T 1f2q_A 131 YENHNISITNATVEDSGTYYCTGKVWQLD--YESEPLNITVIKAP 173 (176)
T ss_dssp CCSSEEEESSCCGGGCEEEEEEEEETTEE--EECCCEEEEEECSC
T ss_pred cCCCeEEECCCCcccCEEEEEEEEeCCcc--eEecCEEEEEecCC
Confidence 23568999999999999999999997442 33455888887665
No 228
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.86 E-value=6.9e-22 Score=197.77 Aligned_cols=178 Identities=16% Similarity=0.169 Sum_probs=128.2
Q ss_pred CCceeccCCCceEEeCCCCC---CCccEEEEccCCCCCc----------------------------ccCCCeEEEee--
Q psy14896 576 APEIGNQNWGKAMFCDPPTN---YPGVNYYWARDYFPNF----------------------------VEEDKRVFVSY-- 622 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~---~p~~~v~W~k~~~~~~----------------------------~~~~~~~~~~~-- 622 (813)
.+..+.+|+.++|.|.+ .+ .|.+.|.|+|++.+.. .....|..+..
T Consensus 10 ~~v~v~~G~~v~L~C~~-~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 88 (250)
T 2fbo_J 10 TEVEVHAGGTVELPCSY-QLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLA 88 (250)
T ss_dssp SEEEECTTSCEEECCEE-EECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTT
T ss_pred CceEEecCCeEEEEEEe-EcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCC
Confidence 35567889999999998 44 7889999999875420 11223444443
Q ss_pred CccEEEEeecccCCeeEEEEEEeeecCccc--cCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCC
Q psy14896 623 DGALYFSALEQIDAGNYSCNVQSKVSDTGR--NGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYP 700 (813)
Q Consensus 623 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P 700 (813)
+.+|.|.+++.+|+|.|+|.|.|..+.... ....+.|.|..++....+.+ .......+.+|++++|.|.+.|.|
T Consensus 89 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~----~~~~~~~v~~g~~v~L~C~~~g~p 164 (250)
T 2fbo_J 89 APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHV----STAEVVQVDEGNDITMTCPCTDCA 164 (250)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEE----CCCSEEECCTTCCEEECCCEESCT
T ss_pred cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEE----ecCceEEecCCCcEEEEEEecCCC
Confidence 357999999999999999999998764321 12357788887632222211 122235677899999999999999
Q ss_pred CCeEEEEeCCcccCCCc------------------------ee-eecceEEEECCCCCCCCEEEEEEEEcCC---CceEE
Q psy14896 701 VPSYNWTRRGSPLPRNA------------------------YF-ENFNRILTIPNVKVEDQGEYICRASNDR---SALES 752 (813)
Q Consensus 701 ~p~i~W~k~g~~l~~~~------------------------~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~---G~~~~ 752 (813)
.|.|+|+|++..+.... +. ......|.|.+++.+|+|.|+|.|.|.. |....
T Consensus 165 ~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~ 244 (250)
T 2fbo_J 165 NANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRS 244 (250)
T ss_dssp TCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEE
T ss_pred CCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccce
Confidence 99999999998875421 01 1134689999999999999999999955 45666
Q ss_pred EEEEEE
Q psy14896 753 SVTISI 758 (813)
Q Consensus 753 ~~~l~V 758 (813)
++.|.|
T Consensus 245 ~~~l~V 250 (250)
T 2fbo_J 245 STILKV 250 (250)
T ss_dssp EEEEEC
T ss_pred eEEEeC
Confidence 666654
No 229
>3c8j_A Natural killer cell receptor LY49C; MHC, virus, immune system; 2.60A {Mus musculus} SCOP: d.169.1.1 PDB: 3c8k_D 1p4l_D 1ja3_A 1p1z_D
Probab=99.86 E-value=2.5e-22 Score=190.04 Aligned_cols=122 Identities=20% Similarity=0.306 Sum_probs=106.3
Q ss_pred ccCCCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeE
Q psy14896 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (813)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~ 104 (813)
.+..||.||..|+++||+|+.+ .++|.+|+..|+.+||+||+|+|++|++||..++. ...+||||.+...++.|.
T Consensus 76 ~~~~Cp~gW~~~~~~CY~~~~~-~~tw~~A~~~C~~~g~~LasI~s~~E~~fl~~~~~----~~~~WIGl~~~~~~~~w~ 150 (203)
T 3c8j_A 76 DTGRGVKYWFCYSTKCYYFIMN-KTTWSGCKANCQHYGVPILKIEDEDELKFLQRHVI----PGNYWIGLSYDKKKKEWA 150 (203)
T ss_dssp -CCCCCEEEEEEETEEEEEEEE-EECHHHHHHHHHHTTCCBCCCCSHHHHHHHHHHSC----SSCEEEEEEEETTTTEEE
T ss_pred CCCCCCCCcEEeCCEEEEEECC-CCCHHHHHHHHHhCCCEeeeeCCHHHHHHHHHhcC----CCCEEEeeeecCCCCceE
Confidence 4567999999999999999998 49999999999999999999999999999999873 457999999988899999
Q ss_pred EcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 105 NEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 105 W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|+||+++.+ +|..++|+ .+.++|+.|... . |.+..|.....|+|++.
T Consensus 151 W~DGs~~~~--~w~~~~pn-~~~~~Cv~l~~~----~--W~d~~C~~~~~fICe~~ 197 (203)
T 3c8j_A 151 WIDNGPSKL--DMKIKKMN-FKSRGCVFLSKA----R--IEDIDCNIPYYCICGKK 197 (203)
T ss_dssp ETTSCCCTT--HHHHHTTC-CCSSSEEEECSS----C--EEEECTTSCEEEEEEEE
T ss_pred ECCCCCCCC--CCCCCCCC-CCCCCcEEEECC----c--EECcCCCCCEEEEEeEC
Confidence 999999985 56666775 457899998532 3 55999999999999995
No 230
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.86 E-value=1.3e-21 Score=188.23 Aligned_cols=167 Identities=14% Similarity=0.128 Sum_probs=114.1
Q ss_pred CceeeCCCceeecCCCccccccEEEEeeec-cCCCCeEEEeecccccccccccccccCCCccEEeeC--C--eEEEcCCc
Q psy14896 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAG-GYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSG--G--NLIINDPR 264 (813)
Q Consensus 190 P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~-g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~--~--~l~i~~~~ 264 (813)
|.|.... +..+.+| +.+.|.|++. +.|.|.|+|||||++|.. ....++.... + +|.|.+.
T Consensus 4 p~~~~~~-~~~v~eg-----~~v~l~c~~~~~~P~p~i~W~kng~~l~~--------~~~~~~~~~~~~g~~~L~I~~v- 68 (207)
T 3rbs_A 4 PFTKSEL-AVEILEK-----GQVRFWMQAEKLSGNAKVNYIFNEKEIFE--------GPKYKMHIDRNTGIIEMFMEKL- 68 (207)
T ss_dssp --CCEEE-EEEECGG-----GCEEEEEECSCCCSCCEEEEEETTEEECS--------SSSCEEEECTTTCEEEEEESCC-
T ss_pred CeeecCC-ceEEEeC-----CeEEEEEEEecCCCCCEEEEEECCEECcc--------CCCEEEEEeCCCCEEEEEECCC-
Confidence 5666543 5666666 6799999996 579999999999987732 1222222222 3 4777775
Q ss_pred cccCCeeEEEEeecCceeeEeeeeEEeee---------------------eecccccCCCCceeecCCCeEEEecCCCCC
Q psy14896 265 QVEDRGSYHCKASNKFGSIISESVQLAFG---------------------FIGEFNLKRAPEIGNQNWGKAMFCDPPTNY 323 (813)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~---------------------~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~ 323 (813)
+.+|+|.|+|.|.| |.+ +....+.+. .+|.+.... ...+.+|+.+.|.|.+ .|.
T Consensus 69 ~~~D~G~Y~C~a~N--g~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v-~g~ 143 (207)
T 3rbs_A 69 QDEDEGTYTFQLQD--GKA-TNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKV-ANI 143 (207)
T ss_dssp CGGGCEEEEEEEEE--TTE-EEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEE-ESC
T ss_pred ChhhCEEEEEEEEC--CCe-EEEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEE-eCC
Confidence 89999999999999 433 222222210 012222222 3567789999999996 566
Q ss_pred -CcceEEEeeccccccccCCccEEEcc-CccEEEeeeeecCCeeeEEEEeeeccccC
Q psy14896 324 -PGVNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTG 378 (813)
Q Consensus 324 -p~~~v~W~k~~~~~~~~~~~~~~~~~-~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 378 (813)
|.|+++|+|||+++.. +.++.... ..+|.|.++..+|+|.|+|.|.|..|...
T Consensus 144 ~P~p~i~W~k~g~~l~~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~ 198 (207)
T 3rbs_A 144 KKETHIVWYKDEREISV--DEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDK 198 (207)
T ss_dssp CTTCEEEEEETTEEECC--CCCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEE
T ss_pred CCCCEEEEEECCEECCC--CCceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEE
Confidence 9999999999998533 33432222 23699999999999999999999998643
No 231
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.86 E-value=6.8e-21 Score=185.75 Aligned_cols=172 Identities=21% Similarity=0.308 Sum_probs=136.8
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
..+.|+..|.++.+.+| +++.|.|.+.|.|.+.|.|||++..+.. . .+++|.|.+. +.+
T Consensus 17 ~~~~i~~~p~~~~v~~G-----~~v~L~C~~~~~p~~~v~W~~~~~~~~~----------~-----~~~~L~i~~v-~~~ 75 (218)
T 3k0w_A 17 RGSKITVNPESKAVLAG-----QFVKLCCRATGHPFVQYQWFKMNKEIPN----------G-----NTSELIFNAV-HVK 75 (218)
T ss_dssp --CCEEECCCCEEEETT-----SBEEEECEETTTTSSEEEEEETTEECTT----------C-----CSSEEEETTC-CGG
T ss_pred CCCEEEECCCCeEEeCC-----CcEEEEeeecCCCCCEEEEEECCEECCC----------C-----CCCEEEEccC-Chh
Confidence 35789999999999888 6699999999999999999999976521 1 2457888885 899
Q ss_pred CCeeEEEEeecCceeeEeeeeEEeeeeec---------------ccccCCCCceeecCCCeEEEecCCCCCCcceEEEee
Q psy14896 268 DRGSYHCKASNKFGSIISESVQLAFGFIG---------------EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWAR 332 (813)
Q Consensus 268 d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~---------------~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k 332 (813)
|+|.|+|.|.|..|...+..+.|.|...+ .+...+....+.+|+.++|.|.+ .+.|.+.+.|++
T Consensus 76 d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~-~g~p~~~v~W~~ 154 (218)
T 3k0w_A 76 DAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVA-VGSPIPHYQWFK 154 (218)
T ss_dssp GCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEE-EBSSCCEEEEEE
T ss_pred hCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEe-cccCCCeEEEEE
Confidence 99999999999988776777888887653 33344556678889999999996 788999999999
Q ss_pred ccccccccCCccEEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccC
Q psy14896 333 DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPH 391 (813)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~ 391 (813)
++..+... ..+.|.|.++..+|+|.|+|.|.|..|.. .+..+.|.|...
T Consensus 155 ~~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~--~s~~~~l~V~~~ 203 (218)
T 3k0w_A 155 NELPLTHE--------TKKLYMVPYVDLEHQGTYWCHVYNDRDSQ--DSKKVEIIIDEL 203 (218)
T ss_dssp TTEECTTC--------CSSEEEESSCCGGGCEEEEEEEECSSCEE--ECCCEEEEECC-
T ss_pred CCEECCCC--------CCCEEEEeecChhcCEEEEEEEEcCCCCc--eeeeEEEEEeCC
Confidence 99875321 24579999999999999999999987743 344577887653
No 232
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.85 E-value=1e-20 Score=180.66 Aligned_cols=178 Identities=22% Similarity=0.383 Sum_probs=131.5
Q ss_pred CCceeeCCC--ceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEee--CCeEEEcCCc
Q psy14896 189 GPYFIKQPT--DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIINDPR 264 (813)
Q Consensus 189 ~P~~~~~p~--~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~ 264 (813)
||.|...+. +..+.+| +++.|.|.+.|.|.+.+.|||+|..+. ...++.+. +++|.|.+.
T Consensus 2 pP~i~~~~~~~~~~v~~G-----~~v~l~C~~~~~p~~~v~W~~~~~~~~----------~~~~~~~~~~~~~L~i~~~- 65 (192)
T 2va4_A 2 MPAISMPQKSFNATAERG-----EEMTFSCRASGSPEPAISWFRNGKLIE----------ENEKYILKGSNTELTVRNI- 65 (192)
T ss_dssp CCEEECSCCEEEEETTSC-----CCEEEECEEECSSCCEEEEEETTEECC----------CSSSEEEETTTTEEEECSC-
T ss_pred CCcccCCCCCcEEEEecC-----CCEEEEEeeccCCCCeEEEEECCeEcC----------CCccEEEeCCeeEEEEecC-
Confidence 567766544 4555555 779999999999999999999998763 22344433 456888885
Q ss_pred cccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccC---
Q psy14896 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE--- 341 (813)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~--- 341 (813)
+.+|+|.|+|.|.|..|.. ...+.|.|..+|.+... ....+.+|+.++|.|.+ .|.|.+.+.|++++....+..
T Consensus 66 ~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~~p~~~~~-~~~~~~~g~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~ 142 (192)
T 2va4_A 66 INSDGGPYVCRATNKAGED-EKQAFLQVFVQPHIIQL-KNETTYENGQVTLVCDA-EGEPIPEITWKRAVDGFTFTEGDK 142 (192)
T ss_dssp CGGGCEEEEEEEEETTEEE-EEEEEEEEEEEEEEEEE-CCEEECTTSEEEEEEEE-EEESCCEEEEEETTTTEEECTTCB
T ss_pred ChhcCcEEEEEEEcccccc-ceEEEEEEEccCccccc-CcceEEeCCeEEEEEEe-cCCCCCcEEEEeCCCCceeecccc
Confidence 8999999999999998877 56788888777765433 34566678889999995 678999999999943322222
Q ss_pred --CccEEEcc---CccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEE
Q psy14896 342 --DKRVFVSY---DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388 (813)
Q Consensus 342 --~~~~~~~~---~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v 388 (813)
..++.+.. .+.|.|.++..+|+|.|+|.|.|..|.... .+.|.|
T Consensus 143 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~---~~~l~V 191 (192)
T 2va4_A 143 SLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQK---SMYLDI 191 (192)
T ss_dssp CTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEE---EEEEEE
T ss_pred ccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEE---EEEEEe
Confidence 23444332 247999999999999999999999886332 355555
No 233
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.85 E-value=1e-21 Score=185.92 Aligned_cols=151 Identities=15% Similarity=0.222 Sum_probs=107.4
Q ss_pred eccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEe-ecccCCeeEEEEEEeeecCccccCceee
Q psy14896 580 GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSA-LEQIDAGNYSCNVQSKVSDTGRNGPFFP 658 (813)
Q Consensus 580 ~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~~~~ 658 (813)
...|+.++|.|.+ .+ |. .|+|+|+|.++. .. .+++|.|.+ ++.+|+|.|+|.|.|..|.... .+.
T Consensus 11 ~~~G~~v~L~C~~-~~-~~-~i~W~k~g~~l~--~~------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~---~~~ 76 (186)
T 1jbj_A 11 SISGTSVELTCPL-DS-DE-NLKWEKNGQELP--QK------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYL---YLK 76 (186)
T ss_dssp EEETTEEEEECSS-CC-CT-TCEEEETTEEEC--SC------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCE---EEC
T ss_pred EeCCcEEEEEEeC-CC-CC-ceEEEECCEECC--CC------CCCEEEECCCCccccCEEEEEEEEeCCCcEEE---EEE
Confidence 4569999999999 45 43 499999997532 21 356899999 9999999999999999886321 222
Q ss_pred EEEcc--CCCccc-------cccC-----CCCCCCC---CcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeee
Q psy14896 659 LKVFP--HSNFQQ-------LKFP-----NNFPKTF---PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN 721 (813)
Q Consensus 659 l~v~~--~p~~~~-------~~~p-----~~~~~~~---~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~ 721 (813)
+.|.. ++.... ...+ ....... ...+.+|++++|.|.+ |.|.|+|+|||..|.....
T Consensus 77 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~--- 150 (186)
T 1jbj_A 77 ARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA--- 150 (186)
T ss_dssp CCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC---
T ss_pred EEEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC---
Confidence 32222 221100 0000 0000000 0235599999999988 8899999999999875432
Q ss_pred cceEEEECCCCCCCCEEEEEEEEcCCCce
Q psy14896 722 FNRILTIPNVKVEDQGEYICRASNDRSAL 750 (813)
Q Consensus 722 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 750 (813)
..++|.|.++..+|+|.|+|.|.|..|+.
T Consensus 151 ~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 151 TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 46789999999999999999999998876
No 234
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.85 E-value=3.6e-21 Score=194.72 Aligned_cols=194 Identities=18% Similarity=0.214 Sum_probs=124.2
Q ss_pred ccCCCceeccCCCceEEeCCC--CCCCccEEEEccCCCCCccc----------------CCCeEEEee-----CccEEEE
Q psy14896 573 LKRAPEIGNQNWGKAMFCDPP--TNYPGVNYYWARDYFPNFVE----------------EDKRVFVSY-----DGALYFS 629 (813)
Q Consensus 573 ~~~~~~~~~~g~~~~l~C~~~--~~~p~~~v~W~k~~~~~~~~----------------~~~~~~~~~-----~~~L~i~ 629 (813)
.......+.+|+.++|.|.+. .+.|.+.|.|+|++...... -..++.+.. +++|.|.
T Consensus 10 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 89 (268)
T 3mj6_A 10 VSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQ 89 (268)
T ss_dssp --CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEEC
T ss_pred cCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEEC
Confidence 344456778999999999983 16788999999976432111 013444422 3679999
Q ss_pred eecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEe---cCCCCCeEEE
Q psy14896 630 ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA---FGYPVPSYNW 706 (813)
Q Consensus 630 ~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~---~g~P~p~i~W 706 (813)
+++.+|+|.|+|.|.|..+... ....+.|.|... .+....+.+|++++|.|.+ .+.|.|.|+|
T Consensus 90 ~v~~~D~G~Y~C~~~~~~~~~~-~~~~~~l~V~~~-------------~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W 155 (268)
T 3mj6_A 90 DVQKADEGIYTCEIRLKNESMV-MKKPVELWVLPE-------------EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNW 155 (268)
T ss_dssp SCCGGGCEEEEEEEEETTCCCE-EEEEEEEEEECC-------------CCSEEEEETTCCEEECCBCEESSSSCCCEEEE
T ss_pred CCCHhHCEEEEEEEEecCCcce-EEEEEEEEEecc-------------CCCccccccCCcEEEEEEecCCCCCCccceEE
Confidence 9999999999999999754421 222345555411 1113567899999999999 6889999999
Q ss_pred EeCCcc-cCCCc-----------------ee----------eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEE
Q psy14896 707 TRRGSP-LPRNA-----------------YF----------ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI 758 (813)
Q Consensus 707 ~k~g~~-l~~~~-----------------~~----------~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 758 (813)
+|++.. +.... ++ .....+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 235 (268)
T 3mj6_A 156 MFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHV 235 (268)
T ss_dssp EEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEE
Confidence 995332 21110 01 133568999999999999999999999999999999999
Q ss_pred -EcCCcccccCCceeecCCCeEE
Q psy14896 759 -QAEPNFTIPLTDKHMDNQADLT 780 (813)
Q Consensus 759 -~~~P~~~~~~~~~~~~~g~~~~ 780 (813)
..+|.+...+....+.+|+.+.
T Consensus 236 ~~~~p~~~~~p~~~~~~~~q~~~ 258 (268)
T 3mj6_A 236 VQDEFQRTISPTPPTDKGQQGIL 258 (268)
T ss_dssp ECC--------------------
T ss_pred EcCCCeeeeCCCCCCCCcceecc
Confidence 5667777778877777776543
No 235
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.85 E-value=1.6e-20 Score=182.25 Aligned_cols=184 Identities=12% Similarity=0.105 Sum_probs=128.7
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCC--eEEEcCCcc
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGG--NLIINDPRQ 265 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~ 265 (813)
.+|.|...|. ..+.+| ++|+|.|.+.+ |.+.|.|||+|..+.... ........++ +|.|.+. +
T Consensus 8 ~~P~i~~~p~-~~v~~G-----~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~-------~~~~~~~~~~~~~L~I~~v-~ 72 (218)
T 1uct_A 8 PMPFISAKSS-PVIPLD-----GSVKIQCQAIR-EAYLTQLMIIKNSTYREI-------GRRLKFWNETDPEFVIDHM-D 72 (218)
T ss_dssp CCCCEEESSC-SEEETT-----CCEEEEECCCT-TCSEEEEEEEETTEEEEC-------SEECC----CCCEEEECSC-C
T ss_pred CCCEEEecCC-CccCCC-----CCEEEEEEcCC-CCCEEEEEECCCcccccc-------cccCCCCcceeeEEEEccc-c
Confidence 3688998887 456666 77999999988 788999999998653110 0000011234 7888875 8
Q ss_pred ccCCeeEEEEeecCcee-eEeeeeEEeeeee---cccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccC
Q psy14896 266 VEDRGSYHCKASNKFGS-IISESVQLAFGFI---GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE 341 (813)
Q Consensus 266 ~~d~G~Y~C~a~n~~g~-~~s~~~~l~v~~~---~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~ 341 (813)
.+|+|.|+|.|.|..|. ..+..+.|.|... |.+...+ ...+.+|+.++|.|.. .+.|.+.+.|+|+|..+..
T Consensus 73 ~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~-~~~~~~~~~W~k~g~~~~~-- 148 (218)
T 1uct_A 73 ANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSS-AHIPFDRFSLAKEGELSLP-- 148 (218)
T ss_dssp GGGCEEEEEEEEETTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEEC-SSSCCSEEEEEETTCSSCC--
T ss_pred cccCEEEEEEEEcCCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeC-CCCCCCEEEEEECCCcccc--
Confidence 99999999999997653 3356678887652 2232223 4577899999999964 4567789999999987532
Q ss_pred CccEEEccCccEEEeeeeecCCeeeEEEEeeeccc--cCCCCCceeeEEccC
Q psy14896 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSD--TGRNGPFFPLKVFPH 391 (813)
Q Consensus 342 ~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~--~~~~s~~~~l~v~~~ 391 (813)
.+.....++.|.|.+++.+|+|.|+|.|.|.... ....+..+.|.|...
T Consensus 149 -~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 149 -QHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp -SEEECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred -cccCCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 2223344668999999999999999999986421 234456677777643
No 236
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.85 E-value=4.7e-21 Score=190.19 Aligned_cols=211 Identities=13% Similarity=0.069 Sum_probs=122.1
Q ss_pred ceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCC-Ce-EEEeeCccEEEEeecccCCeeEEEEEEeeecC--cccc
Q psy14896 578 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEED-KR-VFVSYDGALYFSALEQIDAGNYSCNVQSKVSD--TGRN 653 (813)
Q Consensus 578 ~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~-~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~--~~~~ 653 (813)
..+.+|++++|.|.+ .+ +.+.+.|+|+|..+..... .+ .....+++|.|.+++.+|+|.|+|.|.|..+. ....
T Consensus 16 ~~V~~G~~VtL~C~~-~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~ 93 (257)
T 1b6u_A 16 PLVKSEETVILQCWS-DV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAP 93 (257)
T ss_dssp SEEESSCCEEEEEEE-SS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCC
T ss_pred CEecCCCCEEEEEec-CC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCCCcccccc
Confidence 567889999999998 33 5678999999975321100 00 00123457999999999999999999875421 1222
Q ss_pred CceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCcee---e--ecceEEEE
Q psy14896 654 GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF---E--NFNRILTI 728 (813)
Q Consensus 654 ~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~---~--~~~~~L~i 728 (813)
+..+.|.|...+....+...+ ...+.+|++++|.|.+.+.| +.+.|+|+|..+...... . .....|.|
T Consensus 94 S~~~~L~V~~~~~~P~l~~~p------~~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I 166 (257)
T 1b6u_A 94 SDPLDIVITGLYEKPSLSAQP------GPTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAGPKVNGTFQADFPL 166 (257)
T ss_dssp CCCEEEEEECSSCCCEEECSS------CTTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCBCCSSSCCBEEEEE
T ss_pred CCCEEEecccCCCCcceEccC------CCccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccccccCCceeEEEEe
Confidence 345677777543222222111 13678999999999998865 699999999887543211 1 12578999
Q ss_pred CCCCCCCCEEEEEEEEcCCC-----ceEEEEEEEEEcCCcccccC-CceeecCCCeEEEEEEEcccCCceEEEEECCE
Q psy14896 729 PNVKVEDQGEYICRASNDRS-----ALESSVTISIQAEPNFTIPL-TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGE 800 (813)
Q Consensus 729 ~~v~~~d~G~Y~C~a~N~~G-----~~~~~~~l~V~~~P~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~g~ 800 (813)
.+++ |+|.|+|.|.|..+ ..+..+.|.|.++|.+..+. .......|..+.|.|. .|.+.+.+.|..-+.
T Consensus 167 ~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~~p~~~~~~~~~g~~~~l~~~-~~~~~~~~~~~~~~~ 241 (257)
T 1b6u_A 167 GPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPTEPSSETGNPRHLHAA-AEQKLISEEDLNLDL 241 (257)
T ss_dssp EECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC---------------------------------------
T ss_pred cccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCCCCCCcccCccCCCeEEEEEE-EcchHHHHHHhhhhh
Confidence 9998 99999999998632 34667999999998876322 2334567899999988 488999999976543
No 237
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.84 E-value=9.4e-21 Score=185.61 Aligned_cols=181 Identities=19% Similarity=0.342 Sum_probs=126.3
Q ss_pred CCceeccCCCceEEeCCCCCCCc-----cEEEEccCCCCCc-----------ccCCCeEEEee------CccEEEEeecc
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYPG-----VNYYWARDYFPNF-----------VEEDKRVFVSY------DGALYFSALEQ 633 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p~-----~~v~W~k~~~~~~-----------~~~~~~~~~~~------~~~L~i~~~~~ 633 (813)
.+..+.+|+.++|.|.+ .+.|. +.|.|+|++.... .....++.+.. +++|.|.+++.
T Consensus 3 ~~v~~~~G~~v~L~C~~-~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~ 81 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSF-SPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRV 81 (222)
T ss_dssp CCCCCCTTSCEEECCBC-CCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCG
T ss_pred CCEEEECCCCeEEEEEe-cCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccc
Confidence 34567889999999998 55543 7899999875431 12234555543 56799999999
Q ss_pred cCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEe-cCCCCCeEEEEe-CCc
Q psy14896 634 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-FGYPVPSYNWTR-RGS 711 (813)
Q Consensus 634 ~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~-~g~P~p~i~W~k-~g~ 711 (813)
+|+|.|+|.+.|.. .. ...+.|.|..++....+..+. ...+.+|+.++|.|.+ .|.|.|.|+|++ ++.
T Consensus 82 ~D~G~Y~C~~~~~~-~~---~~~~~l~V~~~~~~p~i~~~~------~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~ 151 (222)
T 4i0k_A 82 TDEGSYTCFVSIQD-FD---SAAVSLQVAAPYSKPSMTLEP------NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGV 151 (222)
T ss_dssp GGCSCEEEEEEECC-CC---CCCCCCCCCBCCCCCEEECCC-----------CCSEEEEEEEEEEEBSCCEEEEECTTSC
T ss_pred ccCEEEEEEEEeCC-Cc---eEEEEEEEEcCCCCCcEEeCC------CceecCCceEEEEEecccccCCCeEEEEcCCCc
Confidence 99999999999863 21 233566666654433333221 1357789999999999 799999999999 566
Q ss_pred ccCCCcee---eecc---eEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCccccc
Q psy14896 712 PLPRNAYF---ENFN---RILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIP 767 (813)
Q Consensus 712 ~l~~~~~~---~~~~---~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~~~~ 767 (813)
.+...... .... ..|.|.+++.+|+|.|+|.|.|..|....++.|.|.++|.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~ 213 (222)
T 4i0k_A 152 PLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLTFPP 213 (222)
T ss_dssp BCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC-------
T ss_pred cCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCccccCC
Confidence 65543321 1112 34899999999999999999999999999999999999876543
No 238
>3g8l_A Lectin-related NK cell receptor LY49L1; natural killer cell receptor, immune system; 2.50A {Mus musculus}
Probab=99.84 E-value=1.6e-21 Score=182.93 Aligned_cols=122 Identities=17% Similarity=0.222 Sum_probs=103.6
Q ss_pred ccCCCch-hhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCe
Q psy14896 25 LELRCPQ-HWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLW 103 (813)
Q Consensus 25 ~~~~Cp~-~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~ 103 (813)
....||. ||..|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||..++. ...+||||.+...++.|
T Consensus 62 ~~~~Cp~~gW~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~LasI~s~~e~~fl~~~~~----~~~~WIGl~~~~~~~~w 136 (190)
T 3g8l_A 62 HTGRGFEKYWFCYGIKCYYFVMDR-KTWSGCKQTCQISSLSLLKIDNEDELKFLKLLVP----SDSYWIGLSYDNKKKDW 136 (190)
T ss_dssp STTCEEEEEEEEEETEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHSC----SSCEEEEEEEETTTTEE
T ss_pred CCCCCCCCCcEEECCEEEEEEccc-CCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHhhC----cCCEEEEEEcCCCCCce
Confidence 4567999 9999999999999984 9999999999999999999999999999999863 45799999998889999
Q ss_pred EEcCCCCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 104 VNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 104 ~W~dgs~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.|+||+++.+ . +|...|. ...++|+.|.. + . |.+..|.....|+|++.
T Consensus 137 ~W~DGs~~~~-~-~~~~~~~-~~~~~Cv~l~~--~--~--W~d~~C~~~~~fICek~ 184 (190)
T 3g8l_A 137 AWINNGPSKL-A-LNTMKYN-IRDGGCMLLSK--T--R--LDNDNCDKSFICICGKR 184 (190)
T ss_dssp EETTTBCCCC-C-CCGGGCC-GGGCSEEEECS--S--C--EEEECTTSCEEEEEEEE
T ss_pred EeCCCCcccc-c-ccCCCCC-CCCCCeEEEeC--C--c--EECCCCCCCeeEEEeeC
Confidence 9999999887 3 3444332 34688999842 2 3 55999999999999995
No 239
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.84 E-value=4.7e-21 Score=183.42 Aligned_cols=170 Identities=11% Similarity=0.067 Sum_probs=110.1
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccC
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 268 (813)
+|.|...|.. .+.+| ++++|.|.+.+.|. .+.|||+|..+.... ........+++|.|.+. +.+|
T Consensus 5 ~P~i~~~p~~-~v~~G-----~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~-------~~~~~~~~~~~L~i~~v-~~~D 69 (196)
T 2d3v_A 5 KATLWAEPGS-VISRG-----NSVTIRCQGTLEAQ-EYRLVKEGSPEPWDT-------QNPLEPKNKARFSIPSM-TEHH 69 (196)
T ss_dssp BCEEEEESCS-EEETT-----CCEEEEEECCTTCC-EEEEEETTCSSCSEE-------ECCCSSTTEEEEEESSC-CGGG
T ss_pred CCEEEeCCCC-cccCC-----CeEEEEEeCCCCCc-EEEEEECCCCCCccc-------ccccCCccccEEEeccC-ChhH
Confidence 5888888874 56666 77999999998765 999999997652110 00001122456788775 8999
Q ss_pred CeeEEEEeecCceee-EeeeeEEeeeeec-ccccCC-CCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccE
Q psy14896 269 RGSYHCKASNKFGSI-ISESVQLAFGFIG-EFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRV 345 (813)
Q Consensus 269 ~G~Y~C~a~n~~g~~-~s~~~~l~v~~~~-~~~~~~-~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~ 345 (813)
+|.|+|.|.|..|.. .+..+.|.|...+ .+.+.. ....+.+|+.++|.|.+ .+.| +.+.|+|+|..+........
T Consensus 70 ~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~-~~~p-~~~~W~k~g~~~~~~~~~~~ 147 (196)
T 2d3v_A 70 AGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPTLSALPSPVVTSGENVTLQCGS-RLRF-DRFILTEEGDHKLSWTLDSQ 147 (196)
T ss_dssp CEEEEEEEEETTEECBCCCCEEEEEECSSCCCEEEC-----------CEEEEEE-SSCC-SEEEEEEC---CCEEEEECE
T ss_pred CeEEEEEEeCCCCcCCcCccEEEEecCCCCCCeEEccCCccccCCCcEEEEEEc-CCCC-CEEEEEccCCcccccccccc
Confidence 999999999988753 3566788887632 222222 22467889999999996 5667 89999999987532111111
Q ss_pred EEcc---CccEEEeeeeecCCeeeEEEEeeecc
Q psy14896 346 FVSY---DGALYFSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 346 ~~~~---~~~L~i~~v~~~D~G~Y~C~a~n~~g 375 (813)
.... .+.|.|.+++.+|+|.|+|.|.|..+
T Consensus 148 ~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 148 LTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp ECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred cccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 1111 25899999999999999999999754
No 240
>2msb_A Mannose-binding protein-A; lectin; HET: BMA MAN; 1.70A {Rattus rattus} SCOP: d.169.1.1 PDB: 1msb_A 1ytt_A*
Probab=99.84 E-value=6.2e-21 Score=163.94 Aligned_cols=113 Identities=13% Similarity=0.080 Sum_probs=96.3
Q ss_pred cCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcCCCCCCccc
Q psy14896 36 YRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGTNLNELD 115 (813)
Q Consensus 36 ~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~dgs~~~~~~ 115 (813)
++++||+++... ++|.+|+..|+.+||+||+|+|++|++||.+++. ..+||||.+...++.|.|.||++++| .
T Consensus 1 ig~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~WiGl~~~~~~~~w~W~dg~~~~~-~ 73 (115)
T 2msb_A 1 SGKKFFVTNHER-MPFSKVKALCSELRGTVAIPRNAEENKAIQEVAK-----TSAFLGITDEVTEGQFMYVTGGRLTY-S 73 (115)
T ss_dssp ---CEEEEEEEE-ECHHHHHHHHHHTTCEECCCSSHHHHHHHHHHHS-----SCEEEEEECSSSTTCCEETTSSBCCS-C
T ss_pred CCCEEEEEeCCC-cCHHHHHHHHHhCCCEEeccCCHHHHHHHHHhhc-----CCEEEeeEcCCCCCcEEECCCCEeee-c
Confidence 368999999884 9999999999999999999999999999999872 57899999988899999999999987 6
Q ss_pred cccCCCCCC-cccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 116 AAFLPEPAD-NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 116 ~~~~~~p~~-~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
+|..++|++ ...++|+.|.. . ..|.+..|.....|+|+++
T Consensus 74 ~W~~~~P~~~~~~~~C~~~~~-~----g~W~~~~C~~~~~fiCe~~ 114 (115)
T 2msb_A 74 NWKKDEPNDHGSGEDCVTIVD-N----GLWNDISCQASHTAVCEFP 114 (115)
T ss_dssp CBCTTCCCCCTTCCCEEEECT-T----SCEEEECTTSCEEEEEEEC
T ss_pred CcCCCCCCCCCCCCCeEEECC-C----CCEECcCCCCCeEEEEeEc
Confidence 777779987 34689999862 2 2455999999999999974
No 241
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.84 E-value=1e-20 Score=176.60 Aligned_cols=159 Identities=18% Similarity=0.246 Sum_probs=121.9
Q ss_pred ccCCCceeccCCCceEEeCCCCCCC-ccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecCcc
Q psy14896 573 LKRAPEIGNQNWGKAMFCDPPTNYP-GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTG 651 (813)
Q Consensus 573 ~~~~~~~~~~g~~~~l~C~~~~~~p-~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 651 (813)
..+....+.+|+.++|.|.+ .+.| .+.+.|+|+|.++.. ..+.+.|.+++.+|+|.|+|.|.|..+
T Consensus 9 ~~p~~~~v~~G~~v~l~C~~-~~~p~~~~~~W~~~g~~~~~---------~~~~~~~~~~~~~d~G~Y~C~~~~~~~--- 75 (170)
T 3ry4_A 9 LEPPWINVLQEDSVTLTCQG-ARSPESDSIQWFHNGNLIPT---------HTQPSYRFKANNNDSGEYTCQTGQTSL--- 75 (170)
T ss_dssp EESCCSEEETTCEEEEEEES-CCCSSSSCEEEEETTEECTT---------CCSSEEEEECCGGGCEEEEEEETTSBC---
T ss_pred eCCCCeEEECCCcEEEEEEe-cCCCCcceEEEEECCeEccc---------CccceEEEecccccCeEEEEEEeCCCc---
Confidence 33444567889999999999 5655 689999999875322 245688899999999999999997543
Q ss_pred ccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEec-CCCCCeEEEEeCCcccCCCceeeecceEEEECC
Q psy14896 652 RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF-GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPN 730 (813)
Q Consensus 652 ~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~-g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~ 730 (813)
...+.|.|..++.... .| ...+.+|++++|.|.+. +.|.+.++|+|+|..+.. ......|.|.+
T Consensus 76 --s~~~~l~v~~~~~~~~--~~-------~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~----~~~~~~L~i~~ 140 (170)
T 3ry4_A 76 --SDPVHLTVLFEWLVLQ--TP-------HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF----SHLDPTFSIPQ 140 (170)
T ss_dssp --CCCEEEEEECCSEEEE--CS-------CSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE----ESSCCEEEESS
T ss_pred --eEeEEEEEECCceEec--CC-------CceeecCCeEEEEEECCCCCCCceEEEEECCeEccc----cCCCCeEEEEe
Confidence 2246788887653322 11 24578899999999995 567789999999988752 22356899999
Q ss_pred CCCCCCEEEEEEEEcCCCc-eEEEEEEEEE
Q psy14896 731 VKVEDQGEYICRASNDRSA-LESSVTISIQ 759 (813)
Q Consensus 731 v~~~d~G~Y~C~a~N~~G~-~~~~~~l~V~ 759 (813)
++.+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 141 v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 170 (170)
T 3ry4_A 141 ANHSHSGDYHCTGNIGYTLFSSKPVTITVQ 170 (170)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred ccccCCEEEEEEEEeCcCccccccEEEEEC
Confidence 9999999999999999997 5667777764
No 242
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.84 E-value=2.4e-20 Score=177.01 Aligned_cols=180 Identities=12% Similarity=0.087 Sum_probs=127.0
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccC
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 268 (813)
+|.|...|.. .+.+| ++|+|.|.+.+ +.+.+.|||+|..+... .........+++|.|.+. +.+|
T Consensus 4 ~P~i~~~p~~-~v~~G-----~~v~L~C~~~~-~~~~~~w~k~g~~~~~~-------~~~~~~~~~~~~L~I~~v-~~~D 68 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKE-----KQVTICCQGNY-GAVEYQLHFEGSLFAVD-------RPKPPERINKVKFYIPDM-NSRM 68 (188)
T ss_dssp CCEEEEESCS-EEETT-----CCEEEEEECCT-TCCEEEEEETTEEEEEE-------CCSSCTTCCEEEEEESSC-CGGG
T ss_pred CCEEEeecCC-cCCCC-----CCEEEEEecCC-CCCEEEEEECCCccccc-------ccccCCCcceeEEEeCcC-Cccc
Confidence 5888888877 66666 77999999987 45799999999765311 001111123457888875 8999
Q ss_pred CeeEEEEeecCcee-eEeeeeEEeeee---ecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCcc
Q psy14896 269 RGSYHCKASNKFGS-IISESVQLAFGF---IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKR 344 (813)
Q Consensus 269 ~G~Y~C~a~n~~g~-~~s~~~~l~v~~---~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~ 344 (813)
+|.|+|.|.|..+. ..+..+.|.|.. .|.+...+ ...+.+|+.++|.|.+. + +.+.+.|+|+|..+.. .+
T Consensus 69 ~G~Y~C~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~-~-~~~~~~w~k~g~~~~~---~~ 142 (188)
T 1oll_A 69 AGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLD-T-ATSMFLLLKEGRSSHV---QR 142 (188)
T ss_dssp CEEEEEEEEETTEECCCCCCEEEEEESCSCCCEEEEES-CSEEETTCEEEEEEECS-S-SCSEEEEEEESSSCEE---EE
T ss_pred CeEEEEEecCCCCCCCCCCceEEEecccCCCCeEEECC-CCccccCCEEEEEEEcC-C-CCCEEEEEECCccccc---cc
Confidence 99999999987653 235667787764 23333222 45678999999999963 3 4579999999987533 12
Q ss_pred EEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEc
Q psy14896 345 VFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389 (813)
Q Consensus 345 ~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~ 389 (813)
.....++.|.|.+++.+|+|.|+|.|.|........+..+.|.|.
T Consensus 143 ~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 143 GYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp EECSSEEEEEEEECCGGGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred cCCCceeEEEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 223345689999999999999999999876333445666777763
No 243
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.84 E-value=1.1e-20 Score=181.36 Aligned_cols=182 Identities=15% Similarity=0.172 Sum_probs=123.1
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccC
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 268 (813)
+|.|...|.. .+.+| ++++|.|.+.+.|. .+.|||+|..+.... ........+++|.|.+. +.+|
T Consensus 5 ~P~i~~~p~~-~v~~G-----~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~-------~~~~~~~~~~~L~i~~v-~~~D 69 (198)
T 1ugn_A 5 KPTLWAEPGS-VITQG-----SPVTLRCQGGQETQ-EYRLYREKKTAPWIT-------RIPQELVKKGQFPIPSI-TWEH 69 (198)
T ss_dssp CCEEEEESCS-EEETT-----CCEEEEEECCTTCC-CEEEEESSSCCHHHH-------TSCHHHHTTTEEEESSC-CGGG
T ss_pred CCeEeccCCC-cccCC-----CcEEEEEEecCCCc-EEEEEECCccccccc-------cccccCCcccEEEECCC-CHHH
Confidence 6888888874 66666 77999999998775 799999998653110 11111223567888875 8999
Q ss_pred CeeEEEEeecCc-ee-eEeeeeEEeeeee-cccccC-CCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCcc
Q psy14896 269 RGSYHCKASNKF-GS-IISESVQLAFGFI-GEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKR 344 (813)
Q Consensus 269 ~G~Y~C~a~n~~-g~-~~s~~~~l~v~~~-~~~~~~-~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~ 344 (813)
+|.|+|.|.|.. |. ..+..+.|.|... +.+.+. .....+.+|+.++|.|.+. +. .+.+.|+|+|..+.... .+
T Consensus 70 ~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~-~~-~~~v~W~k~g~~~~~~~-~~ 146 (198)
T 1ugn_A 70 TGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQ-VA-FDGFILCKEGEDEHPQC-LN 146 (198)
T ss_dssp CEEEEEEEEETTTEECCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEECS-SC-CSEEEEEEC------CE-EE
T ss_pred CeEEEEEEECCCCCcccCCccEEEEEcccccCCccccCCccccCCCCcEEEEEecC-CC-CcEEEEEECCCccCCcc-cc
Confidence 999999999987 63 3366788888763 222222 2236788999999999974 44 67999999998742211 11
Q ss_pred EEEc----cCccEEEeeeeecCCeeeEEEEeeecccc--CCCCCceeeEE
Q psy14896 345 VFVS----YDGALYFSALEQIDAGNYSCNVQSKVSDT--GRNGPFFPLKV 388 (813)
Q Consensus 345 ~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~--~~~s~~~~l~v 388 (813)
.... ..+.|.|.+++.+|+|.|+|.|.|..+.. ...+..+.|.|
T Consensus 147 ~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V 196 (198)
T 1ugn_A 147 SQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLV 196 (198)
T ss_dssp C------CCEEEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEE
T ss_pred ccccCCCcceeEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEe
Confidence 1111 13689999999999999999999986532 23355566665
No 244
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.84 E-value=2.7e-20 Score=183.62 Aligned_cols=190 Identities=20% Similarity=0.308 Sum_probs=136.5
Q ss_pred CCCceeeCC----CceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCC
Q psy14896 188 RGPYFIKQP----TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDP 263 (813)
Q Consensus 188 ~~P~~~~~p----~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 263 (813)
.+|.|+..+ ....+.+| +++.|.|.+.|.|.+.|.|||+|..+..... .........+++|.|.+.
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G-----~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~-----~~~~~~~~~~~~L~i~~~ 83 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAA-----NTVKFRCPAGGNPMPTMRWLKNGKEFKQEHR-----IGGYKVRNQHWSLIMESV 83 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETT-----SCEEEECCEEEESCCEEEEEETTEECCGGGS-----TTCCEEEGGGTEEEECSC
T ss_pred cCCccccccccCceeEEEccC-----CCEEEEEecccCCCCeEEEEECCcccccccc-----ccceeeecCcceEEEecC
Confidence 457776665 67777777 6799999999999999999999987643211 111122233557888885
Q ss_pred ccccCCeeEEEEeecCceeeEeeeeEEeeeeecc----ccc-CCCCceeecCCCeEEEecCCCCCCcceEEEee----cc
Q psy14896 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE----FNL-KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWAR----DY 334 (813)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~----~~~-~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k----~~ 334 (813)
+.+|+|.|+|.|.|..|.. +..+.|.|...+. +.. ......+.+|+.++|.|.+ .+.|.+.+.|++ +|
T Consensus 84 -~~~d~G~Y~C~~~n~~~~~-~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~g 160 (231)
T 3ojm_B 84 -VPSDKGNYTCVVENEYGSI-NHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKV-YSDAQPHIQWIKHVEKNG 160 (231)
T ss_dssp -CGGGCEEEEEEEEETTEEE-EEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCE-ECSSCCEEEEEEECCBTT
T ss_pred -CcccCEEEEEEEecccCcc-cccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEE-ecCCCCEEEEEECCCCCC
Confidence 8999999999999998876 5677777765322 111 2345677889999999995 678999999999 77
Q ss_pred ccccccCCccEEE--------ccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCc
Q psy14896 335 FPNFVEEDKRVFV--------SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 393 (813)
Q Consensus 335 ~~~~~~~~~~~~~--------~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~ 393 (813)
..+.......... ...+.|.|.++..+|+|.|+|.|.|..|... ..+.|.|..+|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~---~~~~l~V~~~p~ 224 (231)
T 3ojm_B 161 SKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQAN---QSAWLTVLPKQQ 224 (231)
T ss_dssp BSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEE---EEEEEEEECCC-
T ss_pred ccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEe---eEEEEEEecCCC
Confidence 6643333222211 1234699999999999999999999988653 347788876543
No 245
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.84 E-value=2e-20 Score=177.22 Aligned_cols=162 Identities=15% Similarity=0.259 Sum_probs=120.1
Q ss_pred ceeccCCCceEEeCCCCCCCcc--EEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecCccccCc
Q psy14896 578 EIGNQNWGKAMFCDPPTNYPGV--NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGP 655 (813)
Q Consensus 578 ~~~~~g~~~~l~C~~~~~~p~~--~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 655 (813)
..+.+|+.++|.|.+ .+.|.+ .+.|+|++.++. ..... .....|.|. ..+|+|.|+|.|.|.. ..
T Consensus 8 ~~v~~G~~v~l~C~~-~~~~~p~~~~~W~k~~~~l~--~~~~~--~~~~~l~i~--~~~d~G~Y~C~~~n~~------~~ 74 (184)
T 3b5h_A 8 TVEDLGSKILLTCSL-NDSATEVTGHRWLKGGVVLK--EDALP--GQKTEFKVD--SDDQWGEYSCVFLPEP------MG 74 (184)
T ss_dssp EEEEETTEEEEEEEE-ESCSSCCCEEEEESSSEEEE--CTTCC--CSEEEEEEC--GGGCCEEEEEEEESTT------SC
T ss_pred EEEecCCCEEEEEEC-CCCCCCceEEEEEeCCEEee--ccccc--CCcEEEEEe--chhhCeEEEEEEECCc------Cc
Confidence 345779999999998 565666 999999986532 22111 112245555 6899999999999821 23
Q ss_pred eeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCC-CCeEEEEe---CCcc-cCCC--ceee----ecce
Q psy14896 656 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYP-VPSYNWTR---RGSP-LPRN--AYFE----NFNR 724 (813)
Q Consensus 656 ~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P-~p~i~W~k---~g~~-l~~~--~~~~----~~~~ 724 (813)
.+.|.|..+|.+... .....+.+|+.++|.|.+.|.| .|.|+|+| ++.. +... .++. ....
T Consensus 75 ~~~l~V~~~P~~~~~--------~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (184)
T 3b5h_A 75 TANIQLHGPPRVKAV--------KSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRS 146 (184)
T ss_dssp EEEEEECCSCCCEES--------CSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEE
T ss_pred EEEEEEecCCceeec--------CCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCee
Confidence 578999888866542 1224678999999999999999 79999999 5543 4322 2221 2235
Q ss_pred EEEECCCC-CCCCEEEEEEEEcCCCceEEEEEEEEEc
Q psy14896 725 ILTIPNVK-VEDQGEYICRASNDRSALESSVTISIQA 760 (813)
Q Consensus 725 ~L~i~~v~-~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 760 (813)
.|.|.+++ .+|+|.|+|.|.|.+|..+..+.|.|..
T Consensus 147 ~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 147 ELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp EEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred EEEEeeccccccCceEEEEEEeCCCcceEEEEEEEec
Confidence 89999999 9999999999999999999999999864
No 246
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.84 E-value=1.6e-20 Score=179.73 Aligned_cols=182 Identities=15% Similarity=0.175 Sum_probs=127.6
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccC
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 268 (813)
+|.|...|.. .+.+| ++++|.|.+.+ |.+.+.|+|+|..+...... ......+++|.|.+. +.+|
T Consensus 5 ~P~i~~~p~~-~v~~G-----~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~-------~~~~~~~~~L~i~~v-~~~D 69 (196)
T 3p2t_A 5 KPTLWAEPGS-VISWG-----NSVTIWCQGTL-EAREYRLDKEESPAPWDRQN-------PLEPKNKARFSIPSM-TEDY 69 (196)
T ss_dssp CCEEEEESCS-EEETT-----CCEEEEEECCT-TCCEEEEEETTSCSCSEEEC-------CCSSSSEEEEEESSC-CGGG
T ss_pred CCEEEccCCC-cCCCC-----CcEEEEeeCCC-CCCEEEEEECCCCCcccccc-------cccCCceEEEEeccC-Cccc
Confidence 5888888887 66666 77999999999 78899999999765211000 000012456888775 8999
Q ss_pred CeeEEEEeecCce-eeEeeeeEEeeeeec---ccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCcc
Q psy14896 269 RGSYHCKASNKFG-SIISESVQLAFGFIG---EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKR 344 (813)
Q Consensus 269 ~G~Y~C~a~n~~g-~~~s~~~~l~v~~~~---~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~ 344 (813)
+|.|+|.|.|..| ...+..+.|.|...+ .+..... ..+.+|+.++|.|.+ .+ +.+.+.|+|+|..+.......
T Consensus 70 ~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~~~~~~~-~~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~~~~~~ 146 (196)
T 3p2t_A 70 AGRYRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALPS-PLVTSGKSVTLLCQS-RS-PMDTFLLCKERAAHPLLCLRS 146 (196)
T ss_dssp CEEEEEEEEETTEEBCCCCCEEEEEECSSCCCEEEEESC-SEECTTCCEEEEEEE-EE-EEEEEEEEETTCCCGGGSEEE
T ss_pred CceEEEEEeCCCcccCCCccEEEEecCCCCCCEEEeCCc-ceecCCCeEEEEEec-CC-CCCEEEEEeCCCcccceeecc
Confidence 9999999999988 344667888876432 2222222 367889999999996 34 567999999998753322111
Q ss_pred --EEEccCccEEEeeeeecCCeeeEEEEeeecccc--CCCCCceeeEE
Q psy14896 345 --VFVSYDGALYFSALEQIDAGNYSCNVQSKVSDT--GRNGPFFPLKV 388 (813)
Q Consensus 345 --~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~--~~~s~~~~l~v 388 (813)
......+.|.|.+++.+|+|.|+|.|.|..+.. ...+..+.|.|
T Consensus 147 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V 194 (196)
T 3p2t_A 147 EHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIV 194 (196)
T ss_dssp EEEEEEEEEEEEECSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEEE
T ss_pred cccccCcceEEEeCCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEEe
Confidence 112335689999999999999999999987632 33344566655
No 247
>1wk1_A Hypothetical protein YK1067A12; lectin C-type domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Caenorhabditis elegans} SCOP: d.169.1.1
Probab=99.83 E-value=6.7e-21 Score=172.48 Aligned_cols=119 Identities=18% Similarity=0.146 Sum_probs=101.5
Q ss_pred ccCCeEEEEecCCc---CCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcCCCCC
Q psy14896 35 QYRDSCYRFVKSPL---KTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGTNL 111 (813)
Q Consensus 35 ~~~~~Cy~~~~~~~---~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~dgs~~ 111 (813)
.|+++||+|+.. . ++|.+|+..|+.+||+||+|++++|++||.+++. ...+||||.+ ..++.|.|.||+++
T Consensus 2 ~~~~~CY~~~~~-~~~~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~WIGl~~-~~~~~w~W~dg~~~ 75 (150)
T 1wk1_A 2 SSGSSGVKFLTV-NDDILSMPQARNFCASAGGYLADDLGDDKNNFYSSIAA----NTQFWIGLFK-NSDGQFYWDRGQGI 75 (150)
T ss_dssp CCSSCCCCSSSC-CSSCBCHHHHHHHHHHHTCEECCCCSHHHHHHHHHHTT----TCEEEEEEEE-CSSSCEEECCSSSS
T ss_pred ccCCEEEEEEec-CCCccCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHhhc----cCCEEEEEEe-CCCCcEEeCCCCcc
Confidence 488999999987 6 8999999999999999999999999999999974 2469999999 88899999999998
Q ss_pred -------CccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 112 -------NELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 112 -------~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.| .+|..++|++...++|+.|..........|.+..|.....|+|++.
T Consensus 76 ~~~~~~~~y-~~W~~geP~~~~~~~Cv~~~~~~~~~~~~W~d~~C~~~~~fICe~~ 130 (150)
T 1wk1_A 76 NPDLLNQPI-TYWANGEPSNDPTRQCVYFDGRSGDKSKVWTTDTCATPRPFICQKH 130 (150)
T ss_dssp CCEECCCSC-CCBCTTCSCCCSSCCEEEEESSCSCGGGCEEEECTTSCBCCCEECC
T ss_pred ccccccCCc-CCCCCCCCCCCCCCCcEEEeCccCCCCCEEeCcCcCCCeeEEEeec
Confidence 55 6777779988667899999743212234566999999999999985
No 248
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.83 E-value=3.9e-20 Score=174.82 Aligned_cols=171 Identities=15% Similarity=0.114 Sum_probs=123.6
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
.+|.|...|.. .+.+| ++++|.|.+.+ |.+.+.|||+|.. ....+++|.|.+. +.+
T Consensus 7 ~~P~i~~~p~~-~v~~G-----~~v~L~C~~~~-~~~~~~W~k~g~~----------------~~~~~~~L~i~~v-~~~ 62 (184)
T 2gi7_A 7 PKPSLQALPSS-LVPLE-----KPVTLRCQGPP-GVDLYRLEKLSSS----------------RYQDQAVLFIPAM-KRS 62 (184)
T ss_dssp CCCEEEEESCS-EEETT-----CCEEEEEECST-TCSEEEEEETTTC----------------CEESSSEEEESSC-CGG
T ss_pred CCCeEEeCCCc-cccCC-----CcEEEEEeCCC-CCCEEEEEECCcc----------------ccCcccEEEECcC-Chh
Confidence 36888888875 66666 77999999988 8899999999953 1234677888875 899
Q ss_pred CCeeEEEEeecCcee-eEeeeeEEeeeee---cccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCc
Q psy14896 268 DRGSYHCKASNKFGS-IISESVQLAFGFI---GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343 (813)
Q Consensus 268 d~G~Y~C~a~n~~g~-~~s~~~~l~v~~~---~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~ 343 (813)
|+|.|+|.|.|..|. ..+..+.|.|... |.+...+ ...+.+|+.++|.|.+ .+. ++.+.|+|+|..+... .
T Consensus 63 D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~-~~~-~~~~~w~k~g~~~~~~--~ 137 (184)
T 2gi7_A 63 LAGRYRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQT-RYG-FDQFALYKEGDPAPYK--N 137 (184)
T ss_dssp GCEEEEEEEEETTEEBCCCCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEEC-SSC-CCEEEEEECCCCTTSC--C
T ss_pred hCceEEEEEEcCCCccCCCCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEc-CCC-CcEEEEEECCCcCcce--e
Confidence 999999999998874 3355677777442 2232223 4466789999999995 443 4699999999875331 1
Q ss_pred cEEEccCccEEEeeeeecCCeeeEEEEeeecccc--CCCCCceeeEE
Q psy14896 344 RVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDT--GRNGPFFPLKV 388 (813)
Q Consensus 344 ~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~--~~~s~~~~l~v 388 (813)
+ .....+.|.|.+++.+|+|.|+|.|.|..+.. ...+..+.|.|
T Consensus 138 ~-~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V 183 (184)
T 2gi7_A 138 P-ERWYRASFPIITVTAAHSGTYRCYSFSSRDPYLWSAPSDPLELVV 183 (184)
T ss_dssp C-CEEEEESSSEEEETTCCSEEEEEEEECTTSTTBCCCCCCCEEEEC
T ss_pred c-CCCceEEEEEccCCccCCeEEEEEEEeCCCCcccCCCCCcEEEEe
Confidence 1 22345689999999999999999999976532 22244444443
No 249
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.83 E-value=1.5e-20 Score=182.88 Aligned_cols=183 Identities=15% Similarity=0.173 Sum_probs=129.7
Q ss_pred CCceeecCCCccccccEEEEeeeccCC----CCeEEEeeccccc--------cccccccc---ccCCCccEEee------
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYP----NPSYEWFKEDYVQ--------DRLVANLI---DPLSDKRFTLS------ 254 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P----~p~v~W~k~g~~l--------~~~~~~~~---~~~~~~~~~~~------ 254 (813)
+..+.+.+| ++++|.|.+.+.| .+.|.|+|++... .......+ ......++.+.
T Consensus 7 ~~~v~v~~G-----~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 81 (214)
T 3jz7_A 7 EQRIEKAKG-----ETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKS 81 (214)
T ss_dssp EEEEEEETT-----SCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGG
T ss_pred CceEEEecC-----CCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccC
Confidence 345666666 7799999999877 4699999955221 00000000 11223344442
Q ss_pred -CCeEEEcCCccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeec
Q psy14896 255 -GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARD 333 (813)
Q Consensus 255 -~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~ 333 (813)
+++|.|.+. +.+|+|.|+|.|.|..|.. +..+.|.|..+|.+........+.+|+.++|.|.+..|.|.+.++|+|+
T Consensus 82 ~~~~L~i~~v-~~~D~G~Y~C~~~~~~~~~-~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~ 159 (214)
T 3jz7_A 82 GDASINVTNL-QLSDIGTYQCKVKKAPGVA-NKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKL 159 (214)
T ss_dssp TBCCEEECSC-CGGGCEEEEEEEEETTEEE-EEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEEC
T ss_pred CcccEEEccC-ChhhCeEEEEEEEeCCCcc-ccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEEC
Confidence 467888885 8999999999999998876 7788999988777655544455778999999999768899999999996
Q ss_pred cccccccCCccEEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEc
Q psy14896 334 YFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389 (813)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~ 389 (813)
+....+... +.....++.|.|.++..+|+|.|+|.|.|..|.... .+.|.|.
T Consensus 160 ~~~~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~---~~~l~V~ 211 (214)
T 3jz7_A 160 SDSQTMPTP-WLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQC---MLRLDVV 211 (214)
T ss_dssp STTCCCCGG-GGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEE---EEEECCB
T ss_pred CCCCccCcc-ceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEE---EEEEEEe
Confidence 544323222 222334569999999999999999999999876532 3666665
No 250
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.83 E-value=1.7e-20 Score=178.58 Aligned_cols=162 Identities=19% Similarity=0.197 Sum_probs=117.2
Q ss_pred CceeccCCCceEEeCCCCCCCccEEEEccCCCCCcc--c-----------C---CCeEEEeeCccEEEEeecccCCeeEE
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV--E-----------E---DKRVFVSYDGALYFSALEQIDAGNYS 640 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~--~-----------~---~~~~~~~~~~~L~i~~~~~~d~G~Y~ 640 (813)
...+.+|+.++|.|.+..+.+.+.|.|+|++..+.. . . ..|+.+..+++|+|.+++.+|+|.|+
T Consensus 7 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y~ 86 (193)
T 2if7_A 7 MVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYR 86 (193)
T ss_dssp EEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCEEEE
T ss_pred EEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCceEE
Confidence 345678999999999854456679999998753211 0 0 13566666788999999999999999
Q ss_pred EEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCC-eEEEEEEecCC-CCCeEEEEeCCcccCCCce
Q psy14896 641 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD-KVRLECVAFGY-PVPSYNWTRRGSPLPRNAY 718 (813)
Q Consensus 641 C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~-~v~l~C~~~g~-P~p~i~W~k~g~~l~~~~~ 718 (813)
|.|.|..|... ..+.|.|..++....+.... ..+..|. +++|.|.+.|. |.|.|+|+|+|..+..
T Consensus 87 C~~~~~~~~~~---~~~~L~V~~~~~~p~i~~~~-------~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~--- 153 (193)
T 2if7_A 87 AQISTKTSAKL---SSYTLRILRQLRNIQVTNHS-------QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSS--- 153 (193)
T ss_dssp EEEECSSCEEE---EEEEEEEECCCEEEEEEECC-------C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEES---
T ss_pred EEEEecCCCeE---EEEEEEEEccCCCCeEecCc-------eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCC---
Confidence 99999876532 25778887765443332211 1234565 89999999985 5789999999987643
Q ss_pred eeecceEEEECCCCCC-CCEEEEEEEEcCCCceEEEEE
Q psy14896 719 FENFNRILTIPNVKVE-DQGEYICRASNDRSALESSVT 755 (813)
Q Consensus 719 ~~~~~~~L~i~~v~~~-d~G~Y~C~a~N~~G~~~~~~~ 755 (813)
...|+|.....+ |+|.|+|.|.|.+|..+..+.
T Consensus 154 ----~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~~ 187 (193)
T 2if7_A 154 ----QPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVS 187 (193)
T ss_dssp ----SSEEEEEECTTTCSCCEEEEEEEETTEEEEEEEE
T ss_pred ----CCeEEEEeccCcCCCCcEEEEEECCCCccccccc
Confidence 345777654554 899999999999998876544
No 251
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.83 E-value=2.5e-20 Score=173.98 Aligned_cols=165 Identities=15% Similarity=0.186 Sum_probs=126.3
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCC-CCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYP-NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P-~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
+|.|...|....+.+| +++.|.|.+.+.| .+.+.|||+|..+.. ..+.++|.+. +.+
T Consensus 4 ~p~i~~~p~~~~v~~G-----~~v~l~C~~~~~p~~~~~~W~~~g~~~~~----------------~~~~~~~~~~-~~~ 61 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQE-----DSVTLTCQGARSPESDSIQWFHNGNLIPT----------------HTQPSYRFKA-NNN 61 (170)
T ss_dssp BCEEEEESCCSEEETT-----CEEEEEEESCCCSSSSCEEEEETTEECTT----------------CCSSEEEEEC-CGG
T ss_pred CCEEEeCCCCeEEECC-----CcEEEEEEecCCCCcceEEEEECCeEccc----------------CccceEEEec-ccc
Confidence 4778888888777777 6799999999887 679999999986521 1334666664 899
Q ss_pred CCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEE
Q psy14896 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFV 347 (813)
Q Consensus 268 d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~ 347 (813)
|+|.|+|.|.|..+ +..+.|.|..++.. .......+.+|+.++|.|.+..+.|.+.+.|+|+|.++.. .
T Consensus 62 d~G~Y~C~~~~~~~---s~~~~l~v~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~-------~ 130 (170)
T 3ry4_A 62 DSGEYTCQTGQTSL---SDPVHLTVLFEWLV-LQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF-------S 130 (170)
T ss_dssp GCEEEEEEETTSBC---CCCEEEEEECCSEE-EECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE-------E
T ss_pred cCeEEEEEEeCCCc---eEeEEEEEECCceE-ecCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccc-------c
Confidence 99999999998654 45677887765432 3344556778999999999767778899999999986421 2
Q ss_pred ccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEE
Q psy14896 348 SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388 (813)
Q Consensus 348 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v 388 (813)
..++.|.|.+++.+|+|.|+|.|.|..|. ..+..+.|.|
T Consensus 131 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~--~~s~~~~l~V 169 (170)
T 3ry4_A 131 HLDPTFSIPQANHSHSGDYHCTGNIGYTL--FSSKPVTITV 169 (170)
T ss_dssp SSCCEEEESSCCGGGCEEEEEEEEETTEE--EECCCEEEEE
T ss_pred CCCCeEEEEeccccCCEEEEEEEEeCcCc--cccccEEEEE
Confidence 34568999999999999999999998874 2344466665
No 252
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.83 E-value=5.2e-20 Score=182.90 Aligned_cols=189 Identities=20% Similarity=0.296 Sum_probs=132.8
Q ss_pred CCceeeC----CCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCc
Q psy14896 189 GPYFIKQ----PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264 (813)
Q Consensus 189 ~P~~~~~----p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 264 (813)
+|.|+.. +..+.+.+| +++.|.|.+.|.|.+.|.|||+|..+.... ..........+++|.|.+.
T Consensus 11 ~P~~~~p~~~~~~~~~v~~G-----~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~-----~~~~~~~~~~~~~L~i~~v- 79 (241)
T 3grw_A 11 APYWTRPERMDKKLLAVPAA-----NTVRFRCPAAGNPTPSISWLKNGREFRGEH-----RIGGIKLRHQQWSLVMESV- 79 (241)
T ss_dssp CCEESSGGGGSCCEEEEETT-----SEEEEECCEECSSCCEEEEEETTEECCGGG-----STTCCEEEGGGTEEEECSC-
T ss_pred CceeEcCCCCCCcceEEcCC-----CeEEEEEEecCCCCceeEEEECCcccCCCC-----cccceeeeccceEEEEEeC-
Confidence 5666644 345677666 779999999999999999999998764321 1111223334667888885
Q ss_pred cccCCeeEEEEeecCceeeEeeeeEEeeeeecc----cc-cCCCCceeecCCCeEEEecCCCCCCcceEEEee----ccc
Q psy14896 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGE----FN-LKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWAR----DYF 335 (813)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~----~~-~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k----~~~ 335 (813)
+.+|+|.|+|.|.|..|.. +..+.|.|...+. +. .......+.+|+.++|.|.+ .+.|.+.+.|++ ++.
T Consensus 80 ~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~-~~~p~p~v~W~~~~~~~g~ 157 (241)
T 3grw_A 80 VPSDRGNYTCVVENKFGSI-RQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKV-YSDAQPHIQWLKHVEVNGS 157 (241)
T ss_dssp CGGGCEEEEEEEEETTEEE-EEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEE-ECSSCCEEEEEEECCSSSC
T ss_pred CcccCEEEEEEEeecCCce-EEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEE-ecCCCCEEEEEEcccCCCc
Confidence 8999999999999998876 5667777765322 11 12445567789999999996 678999999999 777
Q ss_pred cccccCCccEEEc---------cCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCc
Q psy14896 336 PNFVEEDKRVFVS---------YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 393 (813)
Q Consensus 336 ~~~~~~~~~~~~~---------~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~ 393 (813)
.+........... ..+.|.|.++..+|+|.|+|.|.|..|.... .+.|.|..+|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~---~~~l~V~~~p~ 221 (241)
T 3grw_A 158 KVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEK---AFWLSVHGPRA 221 (241)
T ss_dssp SSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEE---EEEEEC-----
T ss_pred ccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEE---EEEEEecCCCC
Confidence 6543333222211 2347999999999999999999998876533 37788776544
No 253
>1rdl_1 SUB-MBP-C, mannose-binding protein-C; C-type lectin, calcium-binding protein; HET: MMA; 1.70A {Rattus rattus} SCOP: d.169.1.1 PDB: 1rdj_1* 1rdk_1* 1rdi_1* 1rdm_1* 1rdn_1* 1rdo_1 1bv4_A 1kza_1* 1kzb_1* 1kzc_1* 1kzd_1* 1kze_1*
Probab=99.83 E-value=2.9e-20 Score=159.08 Aligned_cols=111 Identities=17% Similarity=0.193 Sum_probs=96.0
Q ss_pred CeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcCCCCCCccccc
Q psy14896 38 DSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAA 117 (813)
Q Consensus 38 ~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~dgs~~~~~~~~ 117 (813)
.+||+++... ++|.+|+..|+.+||+||+|++++|++||.+++ ...+||||.+...++.|.|.||+++.| .+|
T Consensus 1 ~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~-----~~~~WIGl~~~~~~~~~~W~dg~~~~y-~~W 73 (113)
T 1rdl_1 1 KKYFMSSVRR-MPLNRAKALCSELQGTVATPRNAEENRAIQNVA-----KDVAFLGITDQRTENVFEDLTGNRVRY-TNW 73 (113)
T ss_dssp -CEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHC-----SSCEEEEEECSSSTTCCEETTSCBCCC-CCB
T ss_pred CeEEEEeCCc-cCHHHHHHHHHhcCCEEcccCCHHHHHHHHHHh-----cCCEEEEeECCCCCCcEEECCCCEeec-CCC
Confidence 4799999985 999999999999999999999999999999886 357999999988899999999999987 677
Q ss_pred cCCCCCC-cccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 118 FLPEPAD-NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 118 ~~~~p~~-~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
..++|++ ...++|+.|... ..|.+..|.....|+|+.+
T Consensus 74 ~~~~P~~~~~~~~Cv~~~~~-----g~w~~~~C~~~~~~ICe~~ 112 (113)
T 1rdl_1 74 NEGEPNNVGSGENCVVLLTN-----GKWNDVPCSDSFLVVCEFS 112 (113)
T ss_dssp CTTCCCCCTTCCCEEEECTT-----SCEEEECTTSCBEEEEEEC
T ss_pred CCCcCCCCCCCCCeeEECCC-----CcEeccCCCCCceEEEeeC
Confidence 7779987 357899998531 3455999999999999974
No 254
>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A 3g84_A* ...
Probab=99.83 E-value=4.3e-21 Score=178.49 Aligned_cols=123 Identities=15% Similarity=0.133 Sum_probs=106.6
Q ss_pred CCchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcC
Q psy14896 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (813)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~d 107 (813)
.|+.+|..|+++||+++.. .++|.+|+..|+.+||+||+|+|++|++||.+++... ...+||||++...++.|.|.|
T Consensus 54 ~~~~~~~~~~~~Cy~~~~~-~~~w~~A~~~C~~~gg~La~i~s~~e~~~l~~~~~~~--~~~~WIGl~~~~~~~~w~W~d 130 (177)
T 1pwb_A 54 ELFPNGQSVGEKIFKTAGF-VKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAK--NEAAFLSMTDSKTEGKFTYPT 130 (177)
T ss_dssp HHTTTEEEETTEEEEEEEE-EEEHHHHHHHHHHTTSEECCCCSHHHHHHHHHHHHHH--TCCEECSCBCSSSTTCCBCTT
T ss_pred hcCCCeEEECCEEEEEcCC-ccCHHHHHHHHHhcCCEEcccCCHHHHHHHHHHHhcC--CCcEEEEEeccCcCCceEeCC
Confidence 4778999999999999988 4999999999999999999999999999999988542 367999999988899999999
Q ss_pred CCCCCccccccCCCCCCc-ccCCeEEEEeeccccccceeeccCCCceeeeeee
Q psy14896 108 GTNLNELDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (813)
Q Consensus 108 gs~~~~~~~~~~~~p~~~-~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~ 159 (813)
|+++.| .+|..++|++. ..++|+.|.. ...|.+..|.....|+|+.
T Consensus 131 G~~~~y-~~W~~geP~~~~~~~~Cv~~~~-----~g~W~d~~C~~~~~fICe~ 177 (177)
T 1pwb_A 131 GESLVY-SNWAPGEPNDDGGSEDCVEIFT-----NGKWNDRACGEKRLVVCEF 177 (177)
T ss_dssp SCBCSC-CCBCTTCCCCGGGCCCEEEECT-----TSCEEEECTTSEEEEEEEC
T ss_pred cCCccc-CCcCCCcCCCCCCCCCcEEECC-----CCcEeCCCCCCCeeEEEeC
Confidence 999987 67777799874 4789999853 1345599999999999974
No 255
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.83 E-value=1.8e-20 Score=179.68 Aligned_cols=183 Identities=13% Similarity=0.180 Sum_probs=124.4
Q ss_pred eeCCCceee-cCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEe--eCCeEEEcCCccccCC
Q psy14896 193 IKQPTDVVF-DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL--SGGNLIINDPRQVEDR 269 (813)
Q Consensus 193 ~~~p~~~~v-~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~d~ 269 (813)
...|.+..+ .+| ++++|.|.+.|.|.|.|.|+|+... +..+ +... .+++|.|.+. +.+|+
T Consensus 4 ~i~p~~~~~~~~G-----~~v~L~C~~~g~P~p~i~W~~~~~~----------~~~~-~~~~~~~~~~L~I~~v-~~~D~ 66 (202)
T 1vca_A 4 ETTPESRYLAQIG-----DSVSLTCSTTGCESPFFSWRTQIDS----------PLNG-KVTNEGTTSTLTMNPV-SFGNE 66 (202)
T ss_dssp EEESSSEEEEETT-----SCEEEEEEEESCSSCEEEEEETTCC----------CCSS-EEEEETTEEEEEESSC-CGGGC
T ss_pred EECCCCcEEEcCC-----CcEEEEEeecCCCCCeEEEECCCCC----------Cccc-eEEEcCCccEEEECcC-CHHHC
Confidence 344555443 355 7799999999999999999995321 0111 1111 2346777775 89999
Q ss_pred eeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCc--ceEEEeeccccccccCCccE--
Q psy14896 270 GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG--VNYYWARDYFPNFVEEDKRV-- 345 (813)
Q Consensus 270 G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~--~~v~W~k~~~~~~~~~~~~~-- 345 (813)
|.|+|.|.|..|.. +..+.|.|..+|..........+.+|+.++|.|.+..+.|. ++|+|+|++.++........
T Consensus 67 G~Y~C~a~n~~~~~-~~~~~l~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~ 145 (202)
T 1vca_A 67 HSYLCTATCESRKL-EKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDAD 145 (202)
T ss_dssp SEEEEEEEETTEEE-EEEEEEEEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCS
T ss_pred EEEEEEEEECCceE-eeEEEEEEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccC
Confidence 99999999998875 77889999877653332223678899999999997555564 48999999987532210000
Q ss_pred ---EEccCccEEEeeeeecCCeeeEEEEeeeccccC----CCCCceeeEEccCCc
Q psy14896 346 ---FVSYDGALYFSALEQIDAGNYSCNVQSKVSDTG----RNGPFFPLKVFPHSN 393 (813)
Q Consensus 346 ---~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~----~~s~~~~l~v~~~~~ 393 (813)
.......|.|..+..+|.|.|+|+|.|..+... .....+.|.|.++|.
T Consensus 146 ~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 146 RKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp SCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred cCcceEEEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 001122467888888899999999999887532 123457788877653
No 256
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.83 E-value=1.5e-20 Score=184.09 Aligned_cols=176 Identities=15% Similarity=0.173 Sum_probs=122.0
Q ss_pred CCceeccCCCceEEeCCCCCCC-----ccEEEEccCCCCCc-------------ccCCCeEEEeeC------ccEEEEee
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYP-----GVNYYWARDYFPNF-------------VEEDKRVFVSYD------GALYFSAL 631 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p-----~~~v~W~k~~~~~~-------------~~~~~~~~~~~~------~~L~i~~~ 631 (813)
.+..+.+|+.++|.|.+ .+.| ...|.|+|++..+. .....+..+..+ .+|.|.++
T Consensus 9 ~~v~~~~G~~v~L~C~~-~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 9 DLYVVEYGSNMTIECKF-PVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp SEEEEETTSCEEEEEEC-CCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred ccEEEEcCCcEEEEeEe-cCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 34567889999999998 5555 34899999752111 111245555433 37999999
Q ss_pred cccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeC-C
Q psy14896 632 EQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-G 710 (813)
Q Consensus 632 ~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~-g 710 (813)
+.+|+|.|+|.|.| .|.. ...+.|.|..++....... ...+.+|+.++|.|.+.|.|.|.|+|+++ |
T Consensus 88 ~~~D~G~Y~C~~~~-~~~~---~~~~~l~V~~~~~~~~~~~--------~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g 155 (222)
T 3sbw_C 88 KLQDAGVYRCMISY-GGAD---YKRITVKVNAPYNKINQRI--------LVVDPVTSEHELTCQAEGYPKAEVIWTSSDH 155 (222)
T ss_dssp CGGGCEEEEEEEES-SSEE---EEEEEEEEEBCCCCCEEEE--------EEEETTTTEEEEEEEEEEBSCCEEEEEETTC
T ss_pred ccccCeEEEEEEEe-CCCc---eeEEEEEEECCCCCCCcee--------eeeecCCCcEEEEEEecCCCCCeEEEEECCC
Confidence 99999999999998 4332 2347788876654332211 02467899999999999999999999999 6
Q ss_pred cccCCCcee---eecceE---EEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCcc
Q psy14896 711 SPLPRNAYF---ENFNRI---LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNF 764 (813)
Q Consensus 711 ~~l~~~~~~---~~~~~~---L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~ 764 (813)
..+...... ...+.. +.+..+..+|+|.|+|.|.|..|....++.|.|..+|..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 215 (222)
T 3sbw_C 156 QVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPLA 215 (222)
T ss_dssp CEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC---
T ss_pred ceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCccc
Confidence 666543321 111221 222244578999999999999999999999999987753
No 257
>3pbf_A Pulmonary surfactant-associated protein A; collectin, carbohydrate binding, lectin, mannose, sugar BIND protein; 1.80A {Rattus norvegicus} PDB: 1r14_A* 1r13_A* 3paq_A* 3par_A 3pak_A
Probab=99.83 E-value=1.7e-20 Score=169.29 Aligned_cols=122 Identities=12% Similarity=0.096 Sum_probs=104.8
Q ss_pred CchhhhccCCeEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcCC
Q psy14896 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDG 108 (813)
Q Consensus 29 Cp~~w~~~~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~dg 108 (813)
+...+..|+++||+|+... ++|.+|+..|+.+||+||+|+|++|++||..++.... ..+||||.+...++.|.|.||
T Consensus 27 ~~~~~~~~~~~Cy~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~--~~~WIGl~~~~~~~~w~W~dg 103 (148)
T 3pbf_A 27 LQGSMLSVGDKVFSTNGQS-VNFDTIKEMCTRAGGNIAVPRTPEENEAIASIAKKYN--NYVYLGMIEDQTPGDFHYLDG 103 (148)
T ss_dssp HTTSCEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHT--SCEEEEEEECSSTTCEEETTS
T ss_pred HHhcceeeCCEEEEEcCCc-cCHHHHHHHHhhcCCEEeeeCCHHHHHHHHHHHHhCC--CCEEEEeEecCCCCceEeCCC
Confidence 4455678999999999984 9999999999999999999999999999999986542 578999999888899999999
Q ss_pred CCCCccccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeee
Q psy14896 109 TNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (813)
Q Consensus 109 s~~~~~~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~ 159 (813)
+++.| .+|..++|++...++|+.|... + .|.+..|.....|+|+.
T Consensus 104 ~~~~~-~~W~~~~P~~~~~~~Cv~~~~~-g----~W~~~~C~~~~~fICe~ 148 (148)
T 3pbf_A 104 ASVSY-TNWYPGEPRGQGKEKCVEMYTD-G----TWNDRGCLQYRLAVCEF 148 (148)
T ss_dssp CBCCS-CCBCTTCCCSTTSCCEEEECTT-S----CEEEECSCSCEEEEEEC
T ss_pred CCccc-CCcCCCccCcCCCCCceEECCC-C----cEecCCCCCCeeEeeeC
Confidence 99987 6777779987667899998652 2 45599999999999973
No 258
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.83 E-value=1.6e-19 Score=174.87 Aligned_cols=186 Identities=15% Similarity=0.178 Sum_probs=129.2
Q ss_pred CCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccc---------cccccCCCccEEe-eCCeEEEcCCcc
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVA---------NLIDPLSDKRFTL-SGGNLIINDPRQ 265 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~---------~~~~~~~~~~~~~-~~~~l~i~~~~~ 265 (813)
|....+.+| ++++|.|.+.+.|.+.|.|||++........ .........++.+ .+++|.|.+. +
T Consensus 6 ~~~~~v~~G-----~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v-~ 79 (208)
T 3r4d_A 6 AVPPQVAED-----NNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMI-T 79 (208)
T ss_dssp EESSEEETT-----CCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSC-C
T ss_pred CccceeecC-----CcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccc-c
Confidence 334555555 7799999998889999999998643221100 0111112334433 3678988885 8
Q ss_pred ccCCeeEEEEeecCceeeEeeeeEEeeeeecc-cccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCcc
Q psy14896 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGE-FNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKR 344 (813)
Q Consensus 266 ~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~-~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~ 344 (813)
.+|+|.|+|.+.|..+...+..+.|.|..++. +.+...+..+.+|+.++|.|.+ .+.| +.+.|++++.++ ....+
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~-~~~p-p~i~W~~~g~~l--~~~~~ 155 (208)
T 3r4d_A 80 MKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLS-NDIG-ANIQWLFNSQSL--QLTER 155 (208)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEEC-SCTT-CEEEEEETTEEC--CCCSS
T ss_pred ccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEEC-CCCC-CceEEEECCEeC--CCCCC
Confidence 99999999999998654446778888866533 2233223338889999999996 4555 799999999874 34455
Q ss_pred EEEccC-ccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCc
Q psy14896 345 VFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 393 (813)
Q Consensus 345 ~~~~~~-~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~ 393 (813)
+.+..+ ++|.|.++..+|+|.|+|.|.|..|.. .+..+.|.|..++.
T Consensus 156 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~--~s~~~~l~v~~~~~ 203 (208)
T 3r4d_A 156 MTLSQNNSILRIDPIKREDAGEYQCEISNPVSVR--RSNSIKLDIIFDPH 203 (208)
T ss_dssp EEEETTTTEEEESSCCGGGCEEEEEEEECTTCCE--ECCCEEECCC----
T ss_pred eEEcCCCCEEEEeccCHHhCeEEEEEEecCCCcc--cCCceeeeEEeCCc
Confidence 555554 689999999999999999999998853 45568888766543
No 259
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.83 E-value=4.8e-20 Score=177.38 Aligned_cols=176 Identities=16% Similarity=0.272 Sum_probs=127.8
Q ss_pred eCCCceeecCCCccccccEEEEee-eccCCC-CeEEEeecccccccccccccccCCCccEE-eeCCeEEEcCCccccCCe
Q psy14896 194 KQPTDVVFDLSKRSILNDITLSCY-AGGYPN-PSYEWFKEDYVQDRLVANLIDPLSDKRFT-LSGGNLIINDPRQVEDRG 270 (813)
Q Consensus 194 ~~p~~~~v~~g~~~~g~~v~l~C~-~~g~P~-p~v~W~k~g~~l~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~~d~G 270 (813)
..+..+.+.+| +++.|.|. +.+.|. +.+.|+|++..+.. .....+.. ..+++|.|.+. +.+|+|
T Consensus 13 ~~~~~~~v~~G-----~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~-------~~~~~~~~~~~~~~L~i~~v-~~~d~G 79 (201)
T 3s97_C 13 EERPEVRVKEG-----KGMVLLCDPPYHFPDDLSYRWLLNEFPVFI-------TMDKRRFVSQTNGNLYIANV-EASDKG 79 (201)
T ss_dssp SCCCCEEEETT-----CCEEECCCCCSEESSCCEEEEEESSTTCBC-------CCSSSEEECTTTCCEEESSC-CGGGCE
T ss_pred CCCceEEEECC-----CCEEEeccccccCCCceEEEEEECCceeee-------eeCCCeEEEcCCCeEEECcC-CcccCe
Confidence 34567777777 66999999 889998 99999999986521 11122222 23677888885 899999
Q ss_pred eEEEEeecCceeeEe--eeeEEeee-------eecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccC
Q psy14896 271 SYHCKASNKFGSIIS--ESVQLAFG-------FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE 341 (813)
Q Consensus 271 ~Y~C~a~n~~g~~~s--~~~~l~v~-------~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~ 341 (813)
.|+|.|.|..+.... ..+.+.+. .+|.+........+.+|+.++|.|.+ .|.|.+.+.|++++.++ ..
T Consensus 80 ~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~--~~ 156 (201)
T 3s97_C 80 NYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFA-LGNPVPDIRWRKVLEPM--PS 156 (201)
T ss_dssp EEEEEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEE-EEESCCEEEEEETTBCC--CT
T ss_pred EEEEEEEecCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEc-cCCCCCceEEEeCCCcC--CC
Confidence 999999997665432 23333332 34445555557778899999999996 77899999999999864 22
Q ss_pred CccEEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEc
Q psy14896 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389 (813)
Q Consensus 342 ~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~ 389 (813)
. ......++.|.|.++..+|+|.|+|.|.|..|.... .+.|.|.
T Consensus 157 ~-~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~---~~~l~V~ 200 (201)
T 3s97_C 157 T-AEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKH---QARIYVQ 200 (201)
T ss_dssp T-CEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEE---EEEEEEE
T ss_pred c-eeecCCCCEEEEccCChhhCEEEEEEEEecCCceee---eEEEEEe
Confidence 2 223345678999999999999999999998876433 3566653
No 260
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.82 E-value=1.7e-20 Score=187.83 Aligned_cols=253 Identities=14% Similarity=0.121 Sum_probs=104.1
Q ss_pred ccccCeEEEEEeeccCCCc-EEEeeccccccceeccccCCCCCceEEeeC---CeEEEeCCCCCCCCceEEEEEEcCcee
Q psy14896 480 SILNDITLSCYAGGYPNPS-YEWFKEDYVQDRLVANLIDPLSDKRFTLSG---GNLIINDPRQVEDRGSYHCKASNKFGS 555 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~~d~G~Y~C~a~n~~g~ 555 (813)
..|+.+.|.|.+.. +.|. +.|.-.-. .......+ ..+.+.++ .. .|.|+|.+.. .|.
T Consensus 12 ~~G~sv~l~Cs~~c-~~p~~~~~~t~l~--------------~~~~~~~g~~~~~~~l~~v-~~--~~~y~C~~~~-~~~ 72 (291)
T 1mq8_A 12 PRGGSVLVTCSTSC-DQPKLLGIETPLP--------------KKELLLPGNNRKVYELSNV-QE--DSQPMCYSNC-PDG 72 (291)
T ss_dssp CTTCEEEEEEEECC-SSCSEEEEECSSC--------------CCCCCCSCSSEEEEEEESC-CS--CCCCEEEEEC-SSC
T ss_pred cCCCeEEEEEeCCC-CCCccceEEecCC--------------CcccccCCCceEEEEEEec-cc--CCeEEEEEEc-CCc
Confidence 78999999999974 5554 88853210 00000011 14677775 43 3579999964 445
Q ss_pred EEeecEEEEEeeccc-ccccCCCceeccCCCceEEeCCCCCCCcc--EEEEccCCCCCcccCCCeEEEeeCccEEEEeec
Q psy14896 556 IISESVQLAFGFIGE-FNLKRAPEIGNQNWGKAMFCDPPTNYPGV--NYYWARDYFPNFVEEDKRVFVSYDGALYFSALE 632 (813)
Q Consensus 556 ~~s~~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~~p~~--~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~ 632 (813)
.....+.|.|..+|. +.+...+..+.+|+.++|+|.+..+.|.. +|+|||++.++.... ........+|.+....
T Consensus 73 ~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~--~~~~~~~~~l~~~~~~ 150 (291)
T 1mq8_A 73 QSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREP--AVGEPAEVTTTVLVRR 150 (291)
T ss_dssp EEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEE--CCBTTEEEEEECCCSS
T ss_pred cEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeeccc--CCCCCceEEEEeeeee
Confidence 556667888887775 44444556688899999999997777765 699999997532111 0000112346666667
Q ss_pred ccCCeeEEEEEEeeecCcc-----ccCceeeEEEccCCCc-cccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCC---e
Q psy14896 633 QIDAGNYSCNVQSKVSDTG-----RNGPFFPLKVFPHSNF-QQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP---S 703 (813)
Q Consensus 633 ~~d~G~Y~C~a~n~~g~~~-----~~~~~~~l~v~~~p~~-~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p---~ 703 (813)
.+|.+.|+|+|.|..+..+ ..+....|.|.++|.. ..+.. +..+.+|+.++|+|.+.|.|++ .
T Consensus 151 ~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~--------p~~l~eG~~v~l~C~~~g~~P~~~~~ 222 (291)
T 1mq8_A 151 DHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS--------PRVLEVDTQGTVVCSLDGLFPVSEAQ 222 (291)
T ss_dssp SCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC----------------------------------------------
T ss_pred ccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecC--------CcCccCCCeEEEEEEcCCCCCCcccE
Confidence 7777799999999876421 2344567888887643 22211 1256899999999999998664 6
Q ss_pred EEEEeCCcccCCCceeeecceEEEECCC---CCC--CCEEEEEEEEcCCCceEEEEEEEEEcCCc
Q psy14896 704 YNWTRRGSPLPRNAYFENFNRILTIPNV---KVE--DQGEYICRASNDRSALESSVTISIQAEPN 763 (813)
Q Consensus 704 i~W~k~g~~l~~~~~~~~~~~~L~i~~v---~~~--d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~ 763 (813)
|+|+++|+.+....... +..+++... ..+ +.+.|+|.|.|+....++...|.|...|.
T Consensus 223 v~w~~~g~~l~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~~ 285 (291)
T 1mq8_A 223 VHLALGDQRLNPTVTYG--NDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPA 285 (291)
T ss_dssp -----------------------------------------------------------------
T ss_pred EEEEECCEecCceeeec--CCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCCC
Confidence 99999999987643222 233444333 343 46788888888665677888899886443
No 261
>1h8u_A MBP, eosinophil granule major basic protein 1; lectin, eosinophil granule protein, EMBP; 1.8A {Homo sapiens} SCOP: d.169.1.1 PDB: 2brs_A*
Probab=99.82 E-value=2.3e-20 Score=161.14 Aligned_cols=113 Identities=19% Similarity=0.251 Sum_probs=94.8
Q ss_pred eE-EEEecCCcCCHHHHHhHccc-CCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEecc--CCCCCeEEcCCCCCCcc
Q psy14896 39 SC-YRFVKSPLKTRNDAKLNCKS-LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQ--QSPNLWVNEDGTNLNEL 114 (813)
Q Consensus 39 ~C-y~~~~~~~~~~~~a~~~C~~-~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~--~~~~~~~W~dgs~~~~~ 114 (813)
+| |+|+... ++|.+|+..|+. +||+||+|+|++|++||..++... ....+||||.+. ..++.|.|.||++++|
T Consensus 1 ~C~Y~~~~~~-~tw~~A~~~C~~~~g~~La~i~s~~e~~~l~~~~~~~-~~~~~WIGl~~~~~~~~~~~~W~dg~~~~y- 77 (117)
T 1h8u_A 1 TCRYLLVRSL-QTFSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSAL-NQGQVWIGGRITGSGRCRRFQWVDGSRWNF- 77 (117)
T ss_dssp --CEEEEEEE-ECHHHHHHHHHHHHSSEECCCCSHHHHHHHHHHHTTC-SSSEEEEEEEEECSSSCCEEEETTCCCCCC-
T ss_pred CeEEEEeCCc-cCHHHHHHHhccCCCCeEEeecCHHHHHHHHHHHhcc-CCCCEEEcccccCCCCCCccEeCCCCcCCc-
Confidence 59 9999985 999999999999 999999999999999999998543 245799999875 4678999999999987
Q ss_pred ccccCCCCCCcccCCeEEEEeeccccccceeeccCCCceeeeeee
Q psy14896 115 DAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (813)
Q Consensus 115 ~~~~~~~p~~~~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~ 159 (813)
.+|..++|++ ..++|+.|....+ . |.+..|.....|+|+.
T Consensus 78 ~~W~~~~P~~-~~~~C~~~~~~~g--~--W~~~~C~~~~~fiCe~ 117 (117)
T 1h8u_A 78 AYWAAHQPWS-RGGHCVALCTRGG--Y--WRRAHCLRRLPFICSY 117 (117)
T ss_dssp CCBCSSSCCT-TSCSEEEEETTTT--C--EEEECTTSCEEEEEEC
T ss_pred cCcCCCCCCC-CCCCCeEEECCCC--c--CCCCCCCCCcceeEeC
Confidence 6777778887 4689999976533 3 5599999999999974
No 262
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.82 E-value=5.9e-20 Score=171.68 Aligned_cols=159 Identities=16% Similarity=0.152 Sum_probs=118.7
Q ss_pred ceeccCCCceEEeCC-CCCCCccEEEEcc--CCCCCcc--------cCCCeEEEeeCccEEEEeecccCCeeEEEEEEee
Q psy14896 578 EIGNQNWGKAMFCDP-PTNYPGVNYYWAR--DYFPNFV--------EEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSK 646 (813)
Q Consensus 578 ~~~~~g~~~~l~C~~-~~~~p~~~v~W~k--~~~~~~~--------~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 646 (813)
....+|+.++|.|.. +.+.+.+.|.|+| ++.++.. ..+.|+.+..+|+|.|.+++.+|+|.|+|.|.|.
T Consensus 9 v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~n~ 88 (182)
T 1hnf_A 9 TWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDT 88 (182)
T ss_dssp EEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEEET
T ss_pred EEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEEeC
Confidence 345779999999954 2356788999999 8765311 3467888889999999999999999999999998
Q ss_pred ecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeeecceEE
Q psy14896 647 VSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRIL 726 (813)
Q Consensus 647 ~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L 726 (813)
.|.... ...+.|.|..+...+.+. ..+..++|.|.+.+.|.|.|+|+++|..| .. ....|
T Consensus 89 ~g~~~~-~~~~~L~V~~~~~~P~i~-------------~~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~-----~~~~i 148 (182)
T 1hnf_A 89 KGKNVL-EKIFDLKIQERVSKPKIS-------------WTCINTTLTCEVMNGTDPELNLYQDGKHL-KL-----SQRVI 148 (182)
T ss_dssp TSCEEE-EEEEEEEEECCCCCCEEE-------------EETTTTEEEEECSSCSSCEEEEEESSCEE-EE-----ESSCE
T ss_pred CCceeE-EEEEEEEEcCcCCCCEEE-------------EccCcEEEEeEccCCCCCEEEEEECCEEC-CC-----CCcEE
Confidence 775322 234667887643221111 12337899999999999999999999988 21 23345
Q ss_pred EECCCCCCCCEEEEEEEEcCCCceEEEEEEE
Q psy14896 727 TIPNVKVEDQGEYICRASNDRSALESSVTIS 757 (813)
Q Consensus 727 ~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 757 (813)
.+.. ..+|+|.|+|.|.|.+|..++...+.
T Consensus 149 ~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 149 THKW-TTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp EEEC-CSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred EEec-ccCCCcEEEEEEEeCCCCcEEcceec
Confidence 5433 57899999999999999988877664
No 263
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.82 E-value=2.5e-20 Score=176.35 Aligned_cols=140 Identities=14% Similarity=0.204 Sum_probs=101.9
Q ss_pred cccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccCCeeEEEEeecCceeeEeeee
Q psy14896 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESV 288 (813)
Q Consensus 209 g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~ 288 (813)
|++++|.|.+.+ |. .|+|+|||..|.. . .+++|.|.+.++.+|+|.|+|.|.|..|.. +..+
T Consensus 14 G~~v~L~C~~~~-~~-~i~W~k~g~~l~~---------~------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~-~~~~ 75 (186)
T 1jbj_A 14 GTSVELTCPLDS-DE-NLKWEKNGQELPQ---------K------HDKHLVLQDFSEVEDSGYYVCYTPASNKNT-YLYL 75 (186)
T ss_dssp TTEEEEECSSCC-CT-TCEEEETTEEECS---------C------CCSEEEEESCCTTTSCEEEEEECSSCCCCC-CEEE
T ss_pred CcEEEEEEeCCC-CC-ceEEEECCEECCC---------C------CCCEEEECCCCccccCEEEEEEEEeCCCcE-EEEE
Confidence 478999999988 54 4999999987621 1 255788888238999999999999998873 4444
Q ss_pred EEeeeeeccccc----------------C--C----CC---ceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCc
Q psy14896 289 QLAFGFIGEFNL----------------K--R----AP---EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343 (813)
Q Consensus 289 ~l~v~~~~~~~~----------------~--~----~~---~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~ 343 (813)
.+.|........ . . .. ..+.+|+.++|.|.+ |.|.++|+|||.++....
T Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~----p~p~i~W~k~g~~i~~~~-- 149 (186)
T 1jbj_A 76 KARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL----TDKTIKWLKDGSIISPLN-- 149 (186)
T ss_dssp CCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS----SCSCEEEEETTEECCCSS--
T ss_pred EEEEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC----CCCeEEEEECCEECcccC--
Confidence 444432211110 0 0 01 123388889999996 889999999998853211
Q ss_pred cEEEccCccEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 344 RVFVSYDGALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 344 ~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
...++|.|.++..+|+|.|+|.|.|..|.
T Consensus 150 ----~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~ 178 (186)
T 1jbj_A 150 ----ATKNTWNLGNNAKDPRGTYQCQGAKETSN 178 (186)
T ss_dssp ----CCSSCCEEEETTSCCEEEEEEEESSCEEE
T ss_pred ----CCcceEEECCCCcCcCEEEEEEEEcCcCC
Confidence 14568999999999999999999999875
No 264
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.82 E-value=2.4e-20 Score=183.69 Aligned_cols=183 Identities=14% Similarity=0.118 Sum_probs=125.1
Q ss_pred ccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeec
Q psy14896 569 GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVS 648 (813)
Q Consensus 569 p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 648 (813)
|.+...+.. .+.+|+.++|.|.+ .+ +...+.|+|+|..+............+++|.|.+++.+|+|.|+|.+.|..+
T Consensus 8 P~i~~~P~~-~v~~G~~VtL~C~~-~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 84 (242)
T 1p6f_A 8 PFIWAEPHF-MVPKEKQVTICCQG-NY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGEL 84 (242)
T ss_dssp CEEEEESCS-EEETTCCEEEEEEC-CT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETTE
T ss_pred CEEEeeCCC-ccCCCCcEEEEEee-CC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCCc
Confidence 334343444 67889999999998 33 4578999999865321111111112345799999999999999999988644
Q ss_pred CccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeeecceEEEE
Q psy14896 649 DTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTI 728 (813)
Q Consensus 649 ~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i 728 (813)
... .+..+.|.|........+... . ...+.+|++|+|.|.+.+.+ +.+.|+|+|..+............|.|
T Consensus 85 ~s~-~S~~~~L~V~~~~~~P~i~~~-----p-~~~v~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~l~I 156 (242)
T 1p6f_A 85 WSE-PSNLLDLVVTEMYDTPTLSVH-----P-GPEVISGEKVTFYCRLDTAT-SMFLLLKEGRSSHVQRGYGKVQAEFPL 156 (242)
T ss_dssp ECC-CCCCEEEEEECCSCCCEEEEE-----S-CSEEETTCEEEEEEECTTSC-SEEEEEECSSSCEEEEEECSSEEEEEE
T ss_pred ccc-CCcceEEEeecccCCCceEcc-----C-CCccCCCCcEEEEEecCCCC-CEEEEEECCCccCccccCCCceEEEEe
Confidence 322 233466777643211111111 1 13578999999999998754 699999999877542223344678999
Q ss_pred CCCCCCCCEEEEEEEEcCC---CceEEEEEEEEEcCC
Q psy14896 729 PNVKVEDQGEYICRASNDR---SALESSVTISIQAEP 762 (813)
Q Consensus 729 ~~v~~~d~G~Y~C~a~N~~---G~~~~~~~l~V~~~P 762 (813)
.+++.+|+|.|+|.|.|.. ...+..+.|.|.+++
T Consensus 157 ~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~ 193 (242)
T 1p6f_A 157 GPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDI 193 (242)
T ss_dssp EECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC--
T ss_pred CCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccC
Confidence 9999999999999999974 345678899998753
No 265
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.82 E-value=4.4e-20 Score=181.27 Aligned_cols=172 Identities=17% Similarity=0.238 Sum_probs=114.2
Q ss_pred CCceeccCCCceEEeCCCCCCCc---cEEEEccCCCCCcc---------------cCCCeEEEee------CccEEEEee
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYPG---VNYYWARDYFPNFV---------------EEDKRVFVSY------DGALYFSAL 631 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p~---~~v~W~k~~~~~~~---------------~~~~~~~~~~------~~~L~i~~~ 631 (813)
.+..+.+|++++|.|.+ .+.+. ..|+|+|++....+ ....|..... +.+|+|.++
T Consensus 12 ~pV~v~~G~~v~L~C~v-~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 90 (226)
T 4f80_A 12 GPILAMVGEDADLPCHL-FPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNV 90 (226)
T ss_dssp SCEEEETTSCEEEEEEE-ESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSC
T ss_pred CCEEEEcCCcEEEEEEE-ECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeC
Confidence 45567899999999998 44443 37999998753211 0112233222 236999999
Q ss_pred cccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecC-CCCCeEEEEeCC
Q psy14896 632 EQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG-YPVPSYNWTRRG 710 (813)
Q Consensus 632 ~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g-~P~p~i~W~k~g 710 (813)
+.+|+|.|+|.|.|..|.... .+.+.+...+.. ......+.+|+.+.|.|.+.| .|.|.|+|+|++
T Consensus 91 ~~~D~G~Y~C~a~n~~~~~~~---~v~~~~~~~~~~----------~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~ 157 (226)
T 4f80_A 91 TASDSGKYLCYFQDGDFYEKA---LVELKVAALGSD----------LHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNK 157 (226)
T ss_dssp CGGGCEEEEEEEEETTEEEEE---EEEEEEEBCCCC----------CEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTT
T ss_pred chHHCeeEEEEEECCCcEEEE---EEEEeeccceec----------ccceeeeccCCceeeEEEeccCCCCCEEEEEECC
Confidence 999999999999998765322 233333322211 122245688999999999998 599999999976
Q ss_pred cc-cCCCce--eeecc---eEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcC
Q psy14896 711 SP-LPRNAY--FENFN---RILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 761 (813)
Q Consensus 711 ~~-l~~~~~--~~~~~---~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 761 (813)
.. +..... ....+ ..+.+..++.+|+|.|+|+|.|.+|..++++.|.|.+|
T Consensus 158 ~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 158 GENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIADP 214 (226)
T ss_dssp SCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCTT
T ss_pred ceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECCC
Confidence 54 433321 11122 23455567889999999999999999999999999753
No 266
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.82 E-value=6.4e-20 Score=178.97 Aligned_cols=173 Identities=17% Similarity=0.183 Sum_probs=124.4
Q ss_pred CceeccCCCceEEeCCCCCCCcc---EEEEccCCCCCccc----------------CCCeEEEe------eCccEEEEee
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYPGV---NYYWARDYFPNFVE----------------EDKRVFVS------YDGALYFSAL 631 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p~~---~v~W~k~~~~~~~~----------------~~~~~~~~------~~~~L~i~~~ 631 (813)
...+.+|+.++|.|.+ .+.|.+ .|+|+|++.+.... ...++... .+++|.|.++
T Consensus 8 ~vtv~~G~~v~L~C~v-~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v 86 (218)
T 4frw_A 8 VVTVVLGQDAKLPCFY-RGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNA 86 (218)
T ss_dssp EEEEETTSCEEECCEE-CCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSC
T ss_pred eEEEEcCCCEEEEEEE-EcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeec
Confidence 3456789999999998 566654 48999987653211 01122211 2346999999
Q ss_pred cccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCc
Q psy14896 632 EQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGS 711 (813)
Q Consensus 632 ~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~ 711 (813)
+.+|+|.|.|.+.|..+..... ...+.+..++..... ......+..|+.+.|.|.+.|.|+|.|+|+|++.
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~ 157 (218)
T 4frw_A 87 VQADEGEYECRVSTFPAGSFQA--RLRLRVLVPPLPSLN-------PGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVK 157 (218)
T ss_dssp CGGGCEEEEEEEEEETTEEEEE--EEEEEEEBCCCCEEE-------ECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSC
T ss_pred cHHHCCceeEEEEeccCceeee--EEEEEEeeeccceee-------eeeeeeeeeccccceeeeccCCcCceEEEEECCc
Confidence 9999999999999877643322 233444433322221 1222457889999999999999999999999999
Q ss_pred ccCCCceeee-----cceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEE
Q psy14896 712 PLPRNAYFEN-----FNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 759 (813)
Q Consensus 712 ~l~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 759 (813)
.+........ ..+.|+|.++..+|+|.|+|+|+|..|..+..++|.|.
T Consensus 158 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 158 GTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp CEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred ccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 8865543322 24579999999999999999999999998877777764
No 267
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.82 E-value=1.4e-20 Score=183.08 Aligned_cols=171 Identities=14% Similarity=0.201 Sum_probs=120.8
Q ss_pred CceeccCCCceEEeCCCCCCCccEEEEccC--CCCCc----------ccCCCeEEEe---eCccEEEEeecccCCeeEEE
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYPGVNYYWARD--YFPNF----------VEEDKRVFVS---YDGALYFSALEQIDAGNYSC 641 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~--~~~~~----------~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C 641 (813)
...+.+|+.++|.|.+ .+.|.+.|.|+|. +.... .....++.+. .+++|.|.+++.+|+|.|+|
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 87 (213)
T 3mj8_L 9 LVSVALGQKATITCSG-DKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYC 87 (213)
T ss_dssp EEEEETTSCEEEEEEC-SSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred cEEEeCCCCEEEEEEc-CCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEE
Confidence 5567889999999999 6889999999993 22111 0123455533 23469999999999999999
Q ss_pred EEEeeecCccccCceeeEEEcc----CCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CC-CeEEEEeCCcccCC
Q psy14896 642 NVQSKVSDTGRNGPFFPLKVFP----HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PV-PSYNWTRRGSPLPR 715 (813)
Q Consensus 642 ~a~n~~g~~~~~~~~~~l~v~~----~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~-p~i~W~k~g~~l~~ 715 (813)
.|.|..|........+.|.|.. +|.+... .....+.+|+.++|.|.+.|. |+ +.|+|+|||.+|..
T Consensus 88 ~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~--------~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 159 (213)
T 3mj8_L 88 QSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLF--------PPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQ 159 (213)
T ss_dssp EEEETTTTEEEEBCCEEEEEECSCCBCCEEEEE--------CCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred EeccCCcceeEEcCceEEEEeCCCCCCCeEEcc--------CCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCC
Confidence 9999877311223346777773 3332211 111334489999999999986 43 39999999999865
Q ss_pred Ccee---------eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEE
Q psy14896 716 NAYF---------ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 756 (813)
Q Consensus 716 ~~~~---------~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 756 (813)
+... ....+.|+|.++..+|+|.|+|.|.|..|....++.+
T Consensus 160 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~ 209 (213)
T 3mj8_L 160 GVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLSP 209 (213)
T ss_dssp TEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEECC
T ss_pred CcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeeecc
Confidence 3211 1123569999999999999999999998776666543
No 268
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.82 E-value=9.4e-21 Score=199.14 Aligned_cols=181 Identities=15% Similarity=0.147 Sum_probs=137.0
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
.+|.|...|.+..+.+| +++.|.|.+.|.|.|.|.|++++..+.... .......+++|.|.+. +.+
T Consensus 157 ~~P~i~~~~~~~~v~~G-----~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~--------~~~~~~~~~~L~i~~v-~~~ 222 (347)
T 2ifg_A 157 GVPTLKVQVPNASVDVG-----DDVLLRCQVEGRGLEQAGWILTELEQSATV--------MKSGGLPSLGLTLANV-TSD 222 (347)
T ss_dssp CCCEEEEECCSSCCBTT-----CCEEEEEEEECSSCCCCCEEESCCCSSEEE--------CCCCCSSEEEEEEESC-CST
T ss_pred CCCceeccCCceEEeCC-----CcEEEEEEEecCCCCEEEEEcCCceeeccc--------ccceecccceEEEeeC-ChH
Confidence 46889999988887777 679999999999999999999997643211 1111233567888885 899
Q ss_pred CCe-eEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEE
Q psy14896 268 DRG-SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVF 346 (813)
Q Consensus 268 d~G-~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~ 346 (813)
|+| .|+|.|.|..|.. +..+.|.|..+|.+ ......+|+.++|.|.+ .|.|.|+|+|+|+|.++.........
T Consensus 223 D~G~~Y~C~a~n~~g~~-~~~~~l~V~~~P~i----~~~~~~~g~~v~l~C~~-~g~P~p~i~W~~~g~~l~~~~~~~~~ 296 (347)
T 2ifg_A 223 LNRKNVTCWAENDVGRA-EVSVQVNVSFPASV----QLHTAVEMHHWCIPFSV-DGQPAPSLRWLFNGSVLNETSFIFTE 296 (347)
T ss_dssp TTTCCEEECCEETTEEC-CEEECCCCBEEEEE----EECCCEESSSEEEEEEE-EEESCCEEEEEETTEECCCCSSEEEE
T ss_pred HCCCeEEEEEEcCCCCE-EEEEEEEEcCCCee----eeccCccCceEEEEEEe-eecCCCcEEEEeCCEECCCCcceeeE
Confidence 999 9999999999987 67788888877775 12234578889999996 67799999999999886422222222
Q ss_pred Ecc--------CccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccC
Q psy14896 347 VSY--------DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPH 391 (813)
Q Consensus 347 ~~~--------~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~ 391 (813)
... +++|.|.+++.+|+|.|+|.|.|..|..... +.|.|..+
T Consensus 297 ~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~---~~l~V~~~ 346 (347)
T 2ifg_A 297 FLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASAS---IMAAFMDN 346 (347)
T ss_dssp ECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEE---EEECSCCC
T ss_pred EEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeE---EEEEecCC
Confidence 222 4579999999999999999999998864332 66666543
No 269
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.82 E-value=2.5e-20 Score=183.90 Aligned_cols=175 Identities=14% Similarity=0.167 Sum_probs=127.9
Q ss_pred CCceeccCCCceEEeCCCCCCCc-cEEEEccCCCCCc---cc--------CCCeEE----------EeeCccEEEEeecc
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNF---VE--------EDKRVF----------VSYDGALYFSALEQ 633 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p~-~~v~W~k~~~~~~---~~--------~~~~~~----------~~~~~~L~i~~~~~ 633 (813)
....+.+|+.++|.|.+ .+.|. +.|.|+|++.... +. -..++. +..++.|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~-~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~~ 86 (231)
T 2pet_A 8 PLVEVMRGKSVILDCTP-TGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQV 86 (231)
T ss_dssp SEEEEETTCCEEECCCC-BSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCCG
T ss_pred CcEEEEcCCCEEEeccc-CCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccCc
Confidence 34567889999999999 67774 8999998765421 00 023444 66677899999999
Q ss_pred cCCeeEEEEEEeee-cCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeE-EEEEEe-cCCCCCeEEEEeCC
Q psy14896 634 IDAGNYSCNVQSKV-SDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV-RLECVA-FGYPVPSYNWTRRG 710 (813)
Q Consensus 634 ~d~G~Y~C~a~n~~-g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v-~l~C~~-~g~P~p~i~W~k~g 710 (813)
+|+|.|+|.|.|.. |.. ...+.|.|..+|....+..+ .....+.+|+.+ +|.|.+ .|.|.|.|+|+|+|
T Consensus 87 ~D~G~Y~C~~~~~~~~~~---~~~~~l~V~~~p~~~~~~~~-----~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~ 158 (231)
T 2pet_A 87 GDERDYVCVVRAGAAGTA---EATARLNVFAKPEATEVSPN-----KGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNG 158 (231)
T ss_dssp GGCEEEEEEEECGGGCEE---EEEEEEEEEBCCCCCEEEEC-----CSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETT
T ss_pred ccCceEEEEEEecCCCce---EEEEEEEEEecCCCcEEecC-----CcceeecCCCceEEEEEEeECcccCCEEEEEECC
Confidence 99999999999987 432 34578888888765443322 223557799988 999999 89999999999999
Q ss_pred cccCCCc----eeeec-------------ceEEEECCCCCCCCEEEEEEEEc-----CCCc-eEEEEEEEEE
Q psy14896 711 SPLPRNA----YFENF-------------NRILTIPNVKVEDQGEYICRASN-----DRSA-LESSVTISIQ 759 (813)
Q Consensus 711 ~~l~~~~----~~~~~-------------~~~L~i~~v~~~d~G~Y~C~a~N-----~~G~-~~~~~~l~V~ 759 (813)
.++.... ++... .+.|.|.....+|+|.|+|.|.| ..|. .+..+.|.|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V~ 230 (231)
T 2pet_A 159 QRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTLH 230 (231)
T ss_dssp EECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCCC
T ss_pred ccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEEe
Confidence 9887654 21110 16689986666679999999999 4555 5566666654
No 270
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.82 E-value=1e-19 Score=176.81 Aligned_cols=163 Identities=15% Similarity=0.205 Sum_probs=118.8
Q ss_pred ccEEEEeeecc-CCCCeEEEeecccccccccccccccCCCccEE--eeCC--eEEEcCCccccCCeeEEEEeecCceeeE
Q psy14896 210 NDITLSCYAGG-YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFT--LSGG--NLIINDPRQVEDRGSYHCKASNKFGSII 284 (813)
Q Consensus 210 ~~v~l~C~~~g-~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~--~~~~--~l~i~~~~~~~d~G~Y~C~a~n~~g~~~ 284 (813)
+.+.|.|.+.+ .|.+.|.|||+|..+.. +.++. ..++ +|.|.+. +.+|+|.|+|.|.|..|..
T Consensus 18 ~~~~l~C~~~~~~p~~~i~W~~~g~~i~~----------~~~~~~~~~~~~~~L~i~~v-~~~D~G~Y~C~~~n~~~~~- 85 (212)
T 2r15_A 18 EGIQLYSFVTYYVEDLKVNWSHNGSAIRY----------SDRVKTGVTGEQIWLQINEP-TPNDKGKYVMELFDGKTGH- 85 (212)
T ss_dssp SEEEEEEEBSSCCSSCEEEEEETTEECCC----------CSSEEEEEETTEEEEEEESC-CGGGCEEEEEEEECSSCEE-
T ss_pred ceEEEEEEEeccCCCceEEEEECCEEccC----------CCeEEEEEeCCEEEEEECCC-CcccCEEEEEEEecCCcce-
Confidence 55899999987 46899999999987632 22333 2333 3888885 8999999999999988876
Q ss_pred eeeeEEeeee--------------------ecccc-cCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCc
Q psy14896 285 SESVQLAFGF--------------------IGEFN-LKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343 (813)
Q Consensus 285 s~~~~l~v~~--------------------~~~~~-~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~ 343 (813)
...+.|.|.. .|.+. ..+....+.+|+.++|.|.+ .|.|.+.+.|+|++.++. ...
T Consensus 86 ~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~--~~~ 162 (212)
T 2r15_A 86 QKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNV-WGDPPPEVSWLKNEKALA--QTD 162 (212)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEE-ECSSCCEEEEEETTEEEC--CCS
T ss_pred EEEEEEEEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEE-cCCCCceEEEEECCeECc--cCC
Confidence 4566665532 12222 12334577889999999996 688999999999998853 333
Q ss_pred cEEEccC----ccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEcc
Q psy14896 344 RVFVSYD----GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP 390 (813)
Q Consensus 344 ~~~~~~~----~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~ 390 (813)
++.+... ..|.|.++..+|+|.|+|.|.|..|.... .+.|.|..
T Consensus 163 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~---~~~l~V~~ 210 (212)
T 2r15_A 163 HCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETS---DFTVSVFI 210 (212)
T ss_dssp SEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEE---EEEEEEEC
T ss_pred CEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEE---EEEEEEEc
Confidence 4444332 28999999999999999999999886433 36666653
No 271
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.81 E-value=1.6e-19 Score=179.12 Aligned_cols=224 Identities=13% Similarity=0.113 Sum_probs=124.5
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccC
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 268 (813)
+|.|...|. ..+.+| ++|+|.|.+.+ +.+.+.|||+|..+..... . ........+++|.|.+. +.+|
T Consensus 7 kP~i~~~P~-~~V~~G-----~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~---~--~~~~~~~~~~~L~I~~v-~~~D 73 (257)
T 1b6u_A 7 KPSLLAHPG-PLVKSE-----ETVILQCWSDV-RFQHFLLHREGKFKDTLHL---I--GEHHDGVSKANFSIGPM-MQDL 73 (257)
T ss_dssp CCEECCBSC-SEEESS-----CCEEEEEEESS-CCSEEEEEEESTTCEEEEE---E--CBCCTTCEEEEEEECSC-CTTT
T ss_pred CCEEEEcCC-CEecCC-----CCEEEEEecCC-CCcEEEEEECCCCCCccee---e--eeccCCCceEEEEeecC-Cccc
Confidence 578888876 556666 77999999976 6789999999976521100 0 00000123456788775 8999
Q ss_pred CeeEEEEeecCc----eeeEeeeeEEeeeee---cccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccC
Q psy14896 269 RGSYHCKASNKF----GSIISESVQLAFGFI---GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE 341 (813)
Q Consensus 269 ~G~Y~C~a~n~~----g~~~s~~~~l~v~~~---~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~ 341 (813)
+|.|+|.|.|.. ....+..+.|.|... |.+...+. ..+.+|+.++|.|.+. +. .+.+.|+|||..+....
T Consensus 74 sG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~-~~-~~~~~w~k~g~~~~~~~ 150 (257)
T 1b6u_A 74 AGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSR-SS-YDMYHLSREGEAHERRF 150 (257)
T ss_dssp CEEEEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECS-SC-CSEEEEEETTSSCEECC
T ss_pred CEEEEEeEeccCCCccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCC-CC-CcEEEEEECCcccCccc
Confidence 999999998643 233466778888653 22333333 4678899999999964 43 46999999998753321
Q ss_pred CccEEE--ccCccEEEeeeeecCCeeeEEEEeeeccc--cCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcE
Q psy14896 342 DKRVFV--SYDGALYFSALEQIDAGNYSCNVQSKVSD--TGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV 417 (813)
Q Consensus 342 ~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~--~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~ 417 (813)
...... ..++.|.|.+++ |+|.|+|.|.|.... ....+..+.|.|...|... .++ ........|..+
T Consensus 151 ~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~--~p~-----~~~~~~~~g~~~ 221 (257)
T 1b6u_A 151 SAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNS--WPS-----PTEPSSETGNPR 221 (257)
T ss_dssp BCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-------------------------
T ss_pred ccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCC--CCC-----CcccCccCCCeE
Confidence 111111 124589999998 999999999976432 2344667888888765432 111 111235679999
Q ss_pred EEEEEEeecCCCeeeEeecCC
Q psy14896 418 RLECVAFGYPVPSYNWTRRGS 438 (813)
Q Consensus 418 ~l~C~~~g~p~p~i~W~~~~~ 438 (813)
.|.|.+ |.+.+.|.|...+-
T Consensus 222 ~l~~~~-~~~~~~~~~~~~~~ 241 (257)
T 1b6u_A 222 HLHAAA-EQKLISEEDLNLDL 241 (257)
T ss_dssp ---------------------
T ss_pred EEEEEE-cchHHHHHHhhhhh
Confidence 999766 55777899987654
No 272
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.81 E-value=2e-19 Score=176.50 Aligned_cols=179 Identities=13% Similarity=0.135 Sum_probs=116.8
Q ss_pred eeecCCCccccccEEEEeeeccCCCC---eEEEeeccccccc-----cc--ccccccCCCccEEee-------CCeEEEc
Q psy14896 199 VVFDLSKRSILNDITLSCYAGGYPNP---SYEWFKEDYVQDR-----LV--ANLIDPLSDKRFTLS-------GGNLIIN 261 (813)
Q Consensus 199 ~~v~~g~~~~g~~v~l~C~~~g~P~p---~v~W~k~g~~l~~-----~~--~~~~~~~~~~~~~~~-------~~~l~i~ 261 (813)
+.+.+| ++|+|.|.+.+.|.+ .|+|+|++....- .. ..........+.... +.+|.|.
T Consensus 14 V~v~~G-----~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 88 (226)
T 4f80_A 14 ILAMVG-----EDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIH 88 (226)
T ss_dssp EEEETT-----SCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEES
T ss_pred EEEEcC-----CcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEe
Confidence 556566 779999999876655 6999998753210 00 000111112222221 2368888
Q ss_pred CCccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccC
Q psy14896 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE 341 (813)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~ 341 (813)
+. +.+|+|.|+|.|.|..|.. ...+.+...+.+........+.+|..+.|.|.+..+.|.|+|+|+|++..+....
T Consensus 89 ~v-~~~D~G~Y~C~a~n~~~~~---~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~ 164 (226)
T 4f80_A 89 NV-TASDSGKYLCYFQDGDFYE---KALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTV 164 (226)
T ss_dssp SC-CGGGCEEEEEEEEETTEEE---EEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCE
T ss_pred eC-chHHCeeEEEEEECCCcEE---EEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCC
Confidence 85 8999999999999998865 3445555555555555666778899999999976667999999999766543444
Q ss_pred CccEEEccCcc---EEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEc
Q psy14896 342 DKRVFVSYDGA---LYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389 (813)
Q Consensus 342 ~~~~~~~~~~~---L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~ 389 (813)
...+....++. +.+..++.+|+|.|+|.|.|..|..... +.|.|.
T Consensus 165 ~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~---~~v~v~ 212 (226)
T 4f80_A 165 EAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKT---ASISIA 212 (226)
T ss_dssp ECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEE---EEECCC
T ss_pred ceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEE---EEEEEC
Confidence 44455555664 3455778999999999999998864432 555553
No 273
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.81 E-value=1.1e-19 Score=181.71 Aligned_cols=184 Identities=17% Similarity=0.111 Sum_probs=124.4
Q ss_pred CCceeecCCCccccccEEEEeeecc---CCCCeEEEeecccccccccccc--------------------cccCCCccEE
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGG---YPNPSYEWFKEDYVQDRLVANL--------------------IDPLSDKRFT 252 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g---~P~p~v~W~k~g~~l~~~~~~~--------------------~~~~~~~~~~ 252 (813)
+..+.+.+| ++++|.|.+.+ .|.+.|.|+|++.......... .......+..
T Consensus 9 ~~~v~v~~G-----~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 83 (250)
T 2fbo_J 9 HTEVEVHAG-----GTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRAS 83 (250)
T ss_dssp CSEEEECTT-----SCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEE
T ss_pred CCceEEecC-----CeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEE
Confidence 456777666 77999999987 7899999999986431000000 0012233444
Q ss_pred ee---CCeEEEcCCccccCCeeEEEEeecCceee----EeeeeEEeeeeec---ccccC-CCCceeecCCCeEEEecCCC
Q psy14896 253 LS---GGNLIINDPRQVEDRGSYHCKASNKFGSI----ISESVQLAFGFIG---EFNLK-RAPEIGNQNWGKAMFCDPPT 321 (813)
Q Consensus 253 ~~---~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~----~s~~~~l~v~~~~---~~~~~-~~~~~~~~~~~~~l~C~~~~ 321 (813)
+. +.+|.|.+. +.+|+|.|+|.|.|..+.. .+..+.|.|..++ .+.+. .....+.+|+.++|.|.+ .
T Consensus 84 ~~~~~~~~L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~-~ 161 (250)
T 2fbo_J 84 VANLAAPTLRLTHV-HPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPC-T 161 (250)
T ss_dssp CSCTTSCCEEECSC-CGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCE-E
T ss_pred eccCCcceEEEeeC-ChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEe-c
Confidence 43 357888885 8999999999999977643 1446777776642 22222 223445569999999996 6
Q ss_pred CCCcceEEEeeccccccccCC----------------------ccEEEccCccEEEeeeeecCCeeeEEEEeeeccccCC
Q psy14896 322 NYPGVNYYWARDYFPNFVEED----------------------KRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGR 379 (813)
Q Consensus 322 ~~p~~~v~W~k~~~~~~~~~~----------------------~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 379 (813)
+.|.|.++|+|++.++..... .+......+.|.|.++..+|+|.|+|.|.|..|..+.
T Consensus 162 g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~ 241 (250)
T 2fbo_J 162 DCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDA 241 (250)
T ss_dssp SCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGE
T ss_pred CCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCc
Confidence 778889999999987543221 2222224468999999999999999999998775544
Q ss_pred CCCceee
Q psy14896 380 NGPFFPL 386 (813)
Q Consensus 380 ~s~~~~l 386 (813)
....+.|
T Consensus 242 ~~~~~~l 248 (250)
T 2fbo_J 242 DRSSTIL 248 (250)
T ss_dssp EEEEEEE
T ss_pred cceeEEE
Confidence 4333333
No 274
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.81 E-value=9.7e-20 Score=176.77 Aligned_cols=182 Identities=14% Similarity=0.131 Sum_probs=120.5
Q ss_pred eCCCceeecCCCccccccEEEEeeeccCCCCeEEEeec---ccccccccccccccCCCccEEe-eCCeEEEcCCccccCC
Q psy14896 194 KQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE---DYVQDRLVANLIDPLSDKRFTL-SGGNLIINDPRQVEDR 269 (813)
Q Consensus 194 ~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~---g~~l~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~~d~ 269 (813)
.+|..+.+.+|.+ ++++|.|.+.+ |.+.+.|+|+ |..+ ..+.++.. .++.|.|.+. +.+|+
T Consensus 12 ~~p~~v~v~eG~~---~~v~L~C~~~~-p~~~v~w~~~~~~g~~~----------~~~~~~~~~~~~~l~I~~v-~~~D~ 76 (213)
T 2x1w_L 12 DQHGVVYITENKN---KTVVIPCLGSI-SNLNVSLCARYPEKRFV----------PDGNRISWDSKKGFTIPSY-MISYA 76 (213)
T ss_dssp --CEEEEECCSTT---CEEEECCCBSS-TTCCEEEEEETTTEEEC----------CCSSSCEEETTTEEEEEGG-GTTTC
T ss_pred CCceEEEEecCCC---ccEEEeeccCC-CCcEEEEEhhcCCCccc----------cCCCcccccCCccEEEccC-ChhcC
Confidence 3457777766621 55999999987 8899999985 5433 12233333 3567888885 89999
Q ss_pred eeEEEEeecCceeeEeeeeEEeeee--ecccccCCCCc-eeecCCCeEEEecCCCC-CCcceEEEeeccccccccCC--c
Q psy14896 270 GSYHCKASNKFGSIISESVQLAFGF--IGEFNLKRAPE-IGNQNWGKAMFCDPPTN-YPGVNYYWARDYFPNFVEED--K 343 (813)
Q Consensus 270 G~Y~C~a~n~~g~~~s~~~~l~v~~--~~~~~~~~~~~-~~~~~~~~~l~C~~~~~-~p~~~v~W~k~~~~~~~~~~--~ 343 (813)
|.|+|.|.|..+...+..+.|.|.. +|.+.+..... .+.+|+.++|.|.+.+. .|.+.+.|++++..+..... .
T Consensus 77 G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~ 156 (213)
T 2x1w_L 77 GMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNR 156 (213)
T ss_dssp SEEEEEEC----CEECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEE
T ss_pred ceEEEEEEECCeeEEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEecc
Confidence 9999999996666555557777743 33344444443 78899999999996422 33468999999987422110 0
Q ss_pred cEE-------EccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCc
Q psy14896 344 RVF-------VSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 393 (813)
Q Consensus 344 ~~~-------~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~ 393 (813)
+.. ....++|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..+|.
T Consensus 157 ~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~---~~~~~l~V~~~p~ 210 (213)
T 2x1w_L 157 DLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTK---KNSTFVRVHEDPI 210 (213)
T ss_dssp EECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEE---EEEEEEEEEC---
T ss_pred ccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcE---EEEEEEEEecccc
Confidence 100 1113469999999999999999999998765 3347888876543
No 275
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.81 E-value=2.4e-20 Score=179.03 Aligned_cols=160 Identities=14% Similarity=0.189 Sum_probs=111.0
Q ss_pred eccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecCccccCceeeE
Q psy14896 580 GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 659 (813)
Q Consensus 580 ~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l 659 (813)
+.+|+.++|.|.+ |.+.|+|+|+|.++... ...+++|.|.+++.+|+|.|+|.+.+.. +..+.|
T Consensus 15 ~~~G~~v~L~C~~----p~~~i~W~k~g~~l~~~------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~------s~~~~v 78 (204)
T 1sy6_A 15 YQEDGSVLLTCDA----EAKNITWFKDGKMIGFL------TEDKKKWNLGSNAKDPRGMYQCKGSQNK------SKPLQV 78 (204)
T ss_dssp CCSSSEEEEEECS----CSSEEEEEETTEEEEEE------ESSCCCEEEEEGGGCCEEEEEEESSSSC------CCCEEE
T ss_pred ecCCCeEEEEEcC----CCCEEEEEECCEECCCC------CCCCCeEEeCCCCcCCCEEEEEEecCCC------CeeEEE
Confidence 3578999999997 78899999998753211 1245689999999999999999975432 112445
Q ss_pred EEccCCCc----------------------c-ccccCCCCCCCCCcCCC-CCCeEEEEEEecCCCCCeEEEEeCCcccCC
Q psy14896 660 KVFPHSNF----------------------Q-QLKFPNNFPKTFPEAPK-AGDKVRLECVAFGYPVPSYNWTRRGSPLPR 715 (813)
Q Consensus 660 ~v~~~p~~----------------------~-~~~~p~~~~~~~~~~~~-~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~ 715 (813)
.+...+.. . ....+... . .+..+. +|++++|.|. |.|.|.|+|+|+|..+..
T Consensus 79 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~p~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~ 154 (204)
T 1sy6_A 79 YYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGIT-Q-TPYKVSISGTTVILTCP--QYPGSEILWQHNDKNIGG 154 (204)
T ss_dssp EEEC-------------------------------------C-CCCEEEEETTEEEEECS--CCCSSCEEEEETTEEESC
T ss_pred EEEEecccccccccccccccccccccccccccccccccee-c-CCceeeecCCcEEEEcC--CCCCCceEEEECCEECCC
Confidence 54410000 0 00000000 0 112334 8999999998 889999999999998865
Q ss_pred Cc---eeeecceEEEECCC-CCCCCEEEEEEEEcCCCc-eEEEEEEEEE
Q psy14896 716 NA---YFENFNRILTIPNV-KVEDQGEYICRASNDRSA-LESSVTISIQ 759 (813)
Q Consensus 716 ~~---~~~~~~~~L~i~~v-~~~d~G~Y~C~a~N~~G~-~~~~~~l~V~ 759 (813)
.. .+...++.|.|.++ +.+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 155 ~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~~ 203 (204)
T 1sy6_A 155 DEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRAR 203 (204)
T ss_dssp CTTCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEEC
T ss_pred ccCCceEecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEEe
Confidence 32 23334789999999 999999999999999997 3667776654
No 276
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.81 E-value=1.1e-19 Score=169.99 Aligned_cols=153 Identities=14% Similarity=0.123 Sum_probs=108.8
Q ss_pred ccccEEEEeeecc--CCCCeEEEeecccccccccccccccCCCccEEe-eCCeEEEcCCccccCCeeEEEEeecCceee-
Q psy14896 208 ILNDITLSCYAGG--YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL-SGGNLIINDPRQVEDRGSYHCKASNKFGSI- 283 (813)
Q Consensus 208 ~g~~v~l~C~~~g--~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~- 283 (813)
+|++++|.|...+ .|.+.|.|||++..|..............++.+ .+++|.|.+. +.+|+|.|+|.|.|..|..
T Consensus 10 ~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v-~~~D~G~Y~C~~~n~~g~~~ 88 (176)
T 1hng_A 10 LGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNL-TRDDSGTYNVTVYSTNGTRI 88 (176)
T ss_dssp TTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSC-CGGGCEEEEEEEEETTCCEE
T ss_pred cCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEccc-ccccCEEEEEEEEeCCCCEE
Confidence 4588999995433 567899999999765321111111122445554 5788999885 8999999999999998876
Q ss_pred EeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEccCccEEEeeeeecCC
Q psy14896 284 ISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA 363 (813)
Q Consensus 284 ~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~ 363 (813)
.+..+.|.|..++. .+.....+..++|.|.+ .|.|.|+|+|+|||+++.. +..+.|.++..+|+
T Consensus 89 ~~~~~~l~V~~~~~-----~p~i~~~~~~v~L~C~~-~g~p~p~i~W~~~g~~l~~----------~~~~~i~~~~~~d~ 152 (176)
T 1hng_A 89 LNKALDLRILEMVS-----KPMIYWECSNATLTCEV-LEGTDVELKLYQGKEHLRS----------LRQKTMSYQWTNLR 152 (176)
T ss_dssp EEEEEEEEEECCCC-----CCEEEEETTTTEEEEEC-SSCSSCEEEEEETTEEEEE----------ESSSEEEEECSCCS
T ss_pred EEEEEEEEEeCCCC-----CCEEEecCCcEEEEEEe-cCCCCcEEEEEECCEECCC----------CCcEEEEEEEccCC
Confidence 45667777765322 12233334468999995 6778899999999986422 22366778999999
Q ss_pred eeeEEEEeeecccc
Q psy14896 364 GNYSCNVQSKVSDT 377 (813)
Q Consensus 364 G~Y~C~a~n~~g~~ 377 (813)
|.|+|.|.|..|..
T Consensus 153 G~Y~C~a~N~~g~~ 166 (176)
T 1hng_A 153 APFKCKAVNRVSQE 166 (176)
T ss_dssp SCEEEEEEETTEEE
T ss_pred eEEEEEEEecCCCc
Confidence 99999999998854
No 277
>1byf_A TC14, protein (polyandrocarpa lectin); C-type lectin, galactose-specific, sugar binding protein; 2.00A {Polyandrocarpa misakiensis} SCOP: d.169.1.1 PDB: 1tlg_A*
Probab=99.81 E-value=8e-20 Score=159.66 Aligned_cols=115 Identities=17% Similarity=0.118 Sum_probs=96.9
Q ss_pred CCeEEEEecCCcCCHHHHHhHcccCCCeEee--eCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCC--eEEcCCCCC-
Q psy14896 37 RDSCYRFVKSPLKTRNDAKLNCKSLDSDLAN--VNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNL--WVNEDGTNL- 111 (813)
Q Consensus 37 ~~~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~--i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~--~~W~dgs~~- 111 (813)
+++||+|+... ++|.+|+..|+.+||+||+ |++++|++||.++ .. .....+|||| +...++. |.|.||+++
T Consensus 1 g~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~~~i~s~~e~~~l~~~-~~-~~~~~~WIGl-~~~~~~~~~w~W~dg~~~~ 76 (125)
T 1byf_A 1 MDYEILFSDET-MNYADAGTYCQSRGMALVSSAMRDSTMVKAILAF-TE-VKGHDYWVGA-DNLQDGAYNFLWNDGVSLP 76 (125)
T ss_dssp -CEEEEEEEEE-ECHHHHHHHHHTTTCEESCGGGGSHHHHHHHHHH-HH-HHTCCEEEEE-ESTTTCTTCCEETTSCBCC
T ss_pred CCeEEEEeCCC-CCHHHHHHHHHHcCCEeeecCCCCHHHHHHHHHh-cC-CCCCCEEEec-ccCCCCceeEEECCCCCCc
Confidence 47999999984 9999999999999999999 9999999999988 21 2346799999 8888899 999999999
Q ss_pred Cccc-cccCCCCCCc-ccCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 112 NELD-AAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 112 ~~~~-~~~~~~p~~~-~~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
.| . +|..++|++. +.++|+.|. .. ...|.+..|.....|+|+..
T Consensus 77 ~~-~~~W~~~~P~~~~~~~~Cv~~~-~~---~~~W~d~~C~~~~~fICe~~ 122 (125)
T 1byf_A 77 TD-SDLWSPNEPSNPQSWQLCVQIW-SK---YNLLDDVGCGGARRVICEKE 122 (125)
T ss_dssp TT-CTTBCTTCSCSCTTSCCEEEEE-TT---TTEEEEECSCSCEEEEEEEE
T ss_pred cc-ccCcCCCcCCCCCCCCCceEEE-CC---CCcEECcCCCCceeEEEeee
Confidence 66 6 7777799874 367999997 32 23566999999999999985
No 278
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.81 E-value=2.7e-19 Score=174.09 Aligned_cols=172 Identities=17% Similarity=0.221 Sum_probs=121.0
Q ss_pred CceeccCCCceEEeCCCCC------CCccEEEEccCCCCC----c-----------ccCCCeEEEee-----CccEEEEe
Q psy14896 577 PEIGNQNWGKAMFCDPPTN------YPGVNYYWARDYFPN----F-----------VEEDKRVFVSY-----DGALYFSA 630 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~------~p~~~v~W~k~~~~~----~-----------~~~~~~~~~~~-----~~~L~i~~ 630 (813)
...+.+|+.++|.|.+... .+.+.+.|+|++... . .....|+.+.. +++|.|.+
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~ 88 (214)
T 2zg1_A 9 SVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGD 88 (214)
T ss_dssp EEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECS
T ss_pred EEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEcc
Confidence 4567889999999998422 257899999986521 0 11235666654 34699999
Q ss_pred ecccCCeeEEEEEEeeecCc-cccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC----CCCeEE
Q psy14896 631 LEQIDAGNYSCNVQSKVSDT-GRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY----PVPSYN 705 (813)
Q Consensus 631 ~~~~d~G~Y~C~a~n~~g~~-~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~----P~p~i~ 705 (813)
++.+|+|.|.|.+.|..+.. ......+.|.|...+....+..| ..+.+|+.++|.|.+.|. |.|.|+
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~--------~~~~~G~~v~L~C~~~~~~~~~p~p~v~ 160 (214)
T 2zg1_A 89 ARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFL--------EPLESGRPTRLSCSLPGSCEAGPPLTFS 160 (214)
T ss_dssp CCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC----------CCCCTTCCEEEEEECTTCCSCSSCCEEE
T ss_pred CCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecC--------ccccCCCeEEEEEEeccCCCCCCCceEE
Confidence 99999999999999875321 11123577888876543333222 236789999999999874 889999
Q ss_pred EEeCCcccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCCc--eEEEEEEEE
Q psy14896 706 WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA--LESSVTISI 758 (813)
Q Consensus 706 W~k~g~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~--~~~~~~l~V 758 (813)
|+|++..+.... ....+.|+|..+..+|+|.|+|.|.|..|. .++++.|.|
T Consensus 161 W~~~~~~~~~~~--~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l~V 213 (214)
T 2zg1_A 161 WTGNALSPLDPE--TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLNV 213 (214)
T ss_dssp EESSTTSSSCSS--CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEECCC
T ss_pred EeCCCCccCCCC--ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEEEe
Confidence 999997654322 134678999999999999999999998754 455555554
No 279
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.81 E-value=9.1e-20 Score=175.38 Aligned_cols=170 Identities=14% Similarity=0.220 Sum_probs=118.8
Q ss_pred ceeccCCCceEEeCCCC---CCCccEEEEccCCCCCcccC----------CCeEEE--eeCccEEEEeecccCCeeEEEE
Q psy14896 578 EIGNQNWGKAMFCDPPT---NYPGVNYYWARDYFPNFVEE----------DKRVFV--SYDGALYFSALEQIDAGNYSCN 642 (813)
Q Consensus 578 ~~~~~g~~~~l~C~~~~---~~p~~~v~W~k~~~~~~~~~----------~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~ 642 (813)
..+.+|+.++|.|.+.. +.|.+.+.|+|++.++.... ..|..+ ..+++|.|.+++.+|+|.|+|.
T Consensus 4 v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 83 (201)
T 1dr9_A 4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECV 83 (201)
T ss_dssp EEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEEE
T ss_pred EEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEEE
Confidence 45678999999999842 34678999999987532111 122322 2346799999999999999999
Q ss_pred EEeeecCcccc--CceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEec-CCCCCeEEEEeCCcccCCCce-
Q psy14896 643 VQSKVSDTGRN--GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF-GYPVPSYNWTRRGSPLPRNAY- 718 (813)
Q Consensus 643 a~n~~g~~~~~--~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~-g~P~p~i~W~k~g~~l~~~~~- 718 (813)
|.|..|..... ...+.|.|..++....+.. .....|+.++|.|.+. |.|.|.|+|+|||..|.....
T Consensus 84 ~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~---------~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~ 154 (201)
T 1dr9_A 84 VLKYEKDAFKREHLAEVTLSVKADFPTPSISD---------FEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTT 154 (201)
T ss_dssp EEECCTTSCEEEEEEEEEEEEECCCCCCEEEE---------EECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEE
T ss_pred EEcCCCCccccccccEEEEEEcCCCCCCceEe---------ccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccce
Confidence 99988754321 2346677766532221111 1224599999999995 999999999999998875432
Q ss_pred ee-ecc-eE---EEECCCCCCCCEEEEEEEEcCCCceEEEEEE
Q psy14896 719 FE-NFN-RI---LTIPNVKVEDQGEYICRASNDRSALESSVTI 756 (813)
Q Consensus 719 ~~-~~~-~~---L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 756 (813)
+. ... .. ..+..+..+|.|.|+|.|.|..|..++.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 155 VSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp EEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred EEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 11 111 22 1234556689999999999999998887765
No 280
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.81 E-value=1e-19 Score=172.24 Aligned_cols=160 Identities=18% Similarity=0.266 Sum_probs=118.2
Q ss_pred ccccEEEEeeeccCCCC--eEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccCCeeEEEEeecCceeeEe
Q psy14896 208 ILNDITLSCYAGGYPNP--SYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIIS 285 (813)
Q Consensus 208 ~g~~v~l~C~~~g~P~p--~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s 285 (813)
+|++++|.|.+.|.|.| .+.|+|+|..+.... .. ....++++. +.+|+|.|+|.|.|.. +
T Consensus 12 ~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~----------~~--~~~~~l~i~--~~~d~G~Y~C~~~n~~----~ 73 (184)
T 3b5h_A 12 LGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDA----------LP--GQKTEFKVD--SDDQWGEYSCVFLPEP----M 73 (184)
T ss_dssp ETTEEEEEEEEESCSSCCCEEEEESSSEEEECTT----------CC--CSEEEEEEC--GGGCCEEEEEEEESTT----S
T ss_pred cCCCEEEEEECCCCCCCceEEEEEeCCEEeeccc----------cc--CCcEEEEEe--chhhCeEEEEEEECCc----C
Confidence 34789999999887777 999999998763211 00 112233333 5899999999999832 4
Q ss_pred eeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCC-cceEEEee---ccccccc-cCCccEEEccCc---cEEEee
Q psy14896 286 ESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP-GVNYYWAR---DYFPNFV-EEDKRVFVSYDG---ALYFSA 357 (813)
Q Consensus 286 ~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p-~~~v~W~k---~~~~~~~-~~~~~~~~~~~~---~L~i~~ 357 (813)
..+.|.|.++|.+........+.+|+.++|.|.+ .|.| .+.+.|+| ++..+.. ....++.+..++ .|.|.+
T Consensus 74 ~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 152 (184)
T 3b5h_A 74 GTANIQLHGPPRVKAVKSSEHINEGETAMLVCKS-ESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIEN 152 (184)
T ss_dssp CEEEEEECCSCCCEESCSEEEECTTSCEEEEEEC-CCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECS
T ss_pred cEEEEEEecCCceeecCCCcEEcCCCcEEEEEEE-CCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEee
Confidence 5678888888887777767778899999999996 6778 79999999 5543322 223566665544 799999
Q ss_pred ee-ecCCeeeEEEEeeeccccCCCCCceeeEEc
Q psy14896 358 LE-QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389 (813)
Q Consensus 358 v~-~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~ 389 (813)
++ .+|+|.|+|.|.|..|..... +.|.|.
T Consensus 153 v~~~~d~G~Y~C~a~N~~g~~~~~---~~l~V~ 182 (184)
T 3b5h_A 153 LNMEADPGQYRCNGTSSKGSDQAI---ITLRVR 182 (184)
T ss_dssp CCTTTSSEEEEEEEEETTEEEEEE---EEEEEC
T ss_pred ccccccCceEEEEEEeCCCcceEE---EEEEEe
Confidence 99 999999999999998864332 666664
No 281
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.80 E-value=3e-19 Score=171.51 Aligned_cols=158 Identities=16% Similarity=0.128 Sum_probs=110.0
Q ss_pred ceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCC-CeEE-EeeCccEEEEeecccCCeeEEEEEEeeecC--cccc
Q psy14896 578 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEED-KRVF-VSYDGALYFSALEQIDAGNYSCNVQSKVSD--TGRN 653 (813)
Q Consensus 578 ~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~-~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~--~~~~ 653 (813)
..+.+|++++|.|.+ . .|.+.+.|+|+|..+..... .+.. ...++.|.|.+++.+|+|.|+|.|.|..+. ....
T Consensus 17 ~~v~~G~~v~L~C~~-~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~ 94 (201)
T 1nkr_A 17 PLVKSEETVILQCWS-D-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAP 94 (201)
T ss_dssp SEEETTCCEEEEEEE-S-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCC
T ss_pred CccCCCCcEEEEEec-c-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccccCC
Confidence 567789999999998 3 37789999999975321110 0011 123467999999999999999999875321 1122
Q ss_pred CceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCcee---e--ecceEEEE
Q psy14896 654 GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF---E--NFNRILTI 728 (813)
Q Consensus 654 ~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~---~--~~~~~L~i 728 (813)
+..+.|.|...+....+...+ ...+.+|++++|.|.+.+ |.+.+.|+|+|..+...... . .....|.|
T Consensus 95 s~~~~l~V~~~~~~p~i~~~p------~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i 167 (201)
T 1nkr_A 95 SDPLDIVIIGLYEKPSLSAQP------GPTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPL 167 (201)
T ss_dssp CCCEEEEEECSSCCCEEEEES------CSEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEE
T ss_pred CCCEEEEeeccCCCCceecCC------CCccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceEEEEEe
Confidence 344677776543222222111 135789999999999987 56899999999987643211 1 12568999
Q ss_pred CCCCCCCCEEEEEEEEcC
Q psy14896 729 PNVKVEDQGEYICRASND 746 (813)
Q Consensus 729 ~~v~~~d~G~Y~C~a~N~ 746 (813)
.+++ |+|.|+|.|.|.
T Consensus 168 ~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 168 GPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp EECC--SCEEEEEEEEET
T ss_pred CCcC--CCeeEEEEEEcC
Confidence 9998 999999999975
No 282
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.80 E-value=6.6e-19 Score=173.41 Aligned_cols=184 Identities=11% Similarity=0.087 Sum_probs=128.3
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccC
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 268 (813)
+|.|...|.. .+.+| ++|+|.|.+.+ +.+.+.|||+|..+... .........+++|.|.+. +.+|
T Consensus 7 kP~i~~~P~~-~v~~G-----~~VtL~C~~~~-~~~~~~w~k~g~~~~~~-------~~~~~~~~~~~~L~I~~v-~~~D 71 (242)
T 1p6f_A 7 KPFIWAEPHF-MVPKE-----KQVTICCQGNY-GAVEYQLHFEGSLFAVD-------RPKPPERINKVKFYIPDM-NSRM 71 (242)
T ss_dssp CCEEEEESCS-EEETT-----CCEEEEEECCT-TCCEEEEEETTEEEEEE-------CCSSCTTCCEEEEEECSC-CGGG
T ss_pred CCEEEeeCCC-ccCCC-----CcEEEEEeeCC-CCcEEEEEECCCccccc-------cccccCCcceeEEEecCC-Cccc
Confidence 6889888887 66666 67999999976 55799999999765311 000011123456788775 8999
Q ss_pred CeeEEEEeecCcee-eEeeeeEEeeeee---cccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCcc
Q psy14896 269 RGSYHCKASNKFGS-IISESVQLAFGFI---GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKR 344 (813)
Q Consensus 269 ~G~Y~C~a~n~~g~-~~s~~~~l~v~~~---~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~ 344 (813)
+|.|+|.+.|..+. ..+..+.|.|... |.+...+ ...+.+|+.++|.|.+. + +.+.+.|+|+|..+.. .+
T Consensus 72 sG~Y~C~~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~p-~~~v~~G~~vtL~C~~~-~-~~~~~~w~k~g~~~~~---~~ 145 (242)
T 1p6f_A 72 AGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLD-T-ATSMFLLLKEGRSSHV---QR 145 (242)
T ss_dssp CEEEEEEEEETTEECCCCCCEEEEEECCSCCCEEEEES-CSEEETTCEEEEEEECT-T-SCSEEEEEECSSSCEE---EE
T ss_pred CeEEEEEEecCCccccCCcceEEEeecccCCCceEccC-CCccCCCCcEEEEEecC-C-CCCEEEEEECCCccCc---cc
Confidence 99999999886543 3366788887642 3333222 35678999999999964 3 3469999999987533 12
Q ss_pred EEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCc
Q psy14896 345 VFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 393 (813)
Q Consensus 345 ~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~ 393 (813)
.....++.|.|.+++.+|+|.|+|.|.|........+..+.|.|...+.
T Consensus 146 ~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~ 194 (242)
T 1p6f_A 146 GYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIE 194 (242)
T ss_dssp EECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC---
T ss_pred cCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccCC
Confidence 2233456899999999999999999998752234456778888876543
No 283
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.80 E-value=1.3e-19 Score=181.61 Aligned_cols=208 Identities=19% Similarity=0.234 Sum_probs=118.8
Q ss_pred ccCCCceeeeeeecccccceEeeccccceeeeeeeCCCCCCCCCceeeCCCceeecCCCccccccEEEEeeeccCC----
Q psy14896 147 VTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYP---- 222 (813)
Q Consensus 147 ~~~~d~~~y~C~~~~~~~~~~~~~~~~~~~~l~v~~p~~~~~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P---- 222 (813)
++..|+|.|.|.+.. .....+.+.+.. +|.+...|..+.+.+| ++++|.|.+.+.|
T Consensus 11 v~~~dsg~Y~C~a~g---------~~~~~~~~~~~~------~~~~~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~~ 70 (254)
T 2c1o_A 11 VRPGTSVKLSCKASG---------YSFTNYWMNWLR------ELVMTQSPLTLSVTIG-----QPASISCKSSQSLLYSN 70 (254)
T ss_dssp ------------------------------------------CCCEEEECSEEEECTT-----SCEEEEEEESSCCBCSS
T ss_pred ecCCccEEEEEcCch---------hhhhhhhhheee------ceeEEeCCceEEecCC-----CcEEEEeeccCcccccC
Confidence 677899999999961 111122222211 4678877888888777 6799999999987
Q ss_pred -CCeEEEeecc--cccccccc--cccccCCCccEEee-C---CeEEEcCCccccCCeeEEEEeecCceeeEeeeeEEeee
Q psy14896 223 -NPSYEWFKED--YVQDRLVA--NLIDPLSDKRFTLS-G---GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293 (813)
Q Consensus 223 -~p~v~W~k~g--~~l~~~~~--~~~~~~~~~~~~~~-~---~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~ 293 (813)
.+.|.|||++ ..+..... .........++... + .+|.|.+. +.+|+|.|+|.|.|..+......+.|.|.
T Consensus 71 ~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v-~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~ 149 (254)
T 2c1o_A 71 GKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRV-EAEDLGIYYCVQGSHFPPTFGAGTKLELK 149 (254)
T ss_dssp SCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC-CGGGCSEEEEEECSSSSCEEBCCEEEEEC
T ss_pred CCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcC-CcccCEEEEEEEEcCcceEecCCEEEEEC
Confidence 4899999854 22210000 00011122455443 2 26888875 89999999999999876544444566664
Q ss_pred e---ecccccCCCCceeecCCCeEEEecCCCCCCc-ceEEEeeccccccccCCccEE--Ecc------CccEEEeeeeec
Q psy14896 294 F---IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVF--VSY------DGALYFSALEQI 361 (813)
Q Consensus 294 ~---~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~v~W~k~~~~~~~~~~~~~~--~~~------~~~L~i~~v~~~ 361 (813)
. +|.+.+.........|+.++|.|.+.+..|. ++++|+|||+++......+.. ... .+.|.|.++..+
T Consensus 150 ~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~ 229 (254)
T 2c1o_A 150 RADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYE 229 (254)
T ss_dssp CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHH
T ss_pred CCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEecccccc
Confidence 3 3334433333334467788999997443555 579999999875322001111 111 236999999999
Q ss_pred CCeeeEEEEeeecc
Q psy14896 362 DAGNYSCNVQSKVS 375 (813)
Q Consensus 362 D~G~Y~C~a~n~~g 375 (813)
|+|.|+|.|.|...
T Consensus 230 d~G~Y~C~a~n~~~ 243 (254)
T 2c1o_A 230 RHNSYTCEATHKTS 243 (254)
T ss_dssp TCCEEEEEEECTTC
T ss_pred CCCeEEEEEEcCCC
Confidence 99999999999764
No 284
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.80 E-value=1.4e-19 Score=173.61 Aligned_cols=155 Identities=20% Similarity=0.328 Sum_probs=107.3
Q ss_pred ccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccCCeeEEEEeecCceeeEeee
Q psy14896 208 ILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISES 287 (813)
Q Consensus 208 ~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~ 287 (813)
+|++++|.|.+ |.+.|+|||||..+... ...+++|.|.+. +.+|+|.|+|.+.+.. +..
T Consensus 17 ~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-------------~~~~~~L~i~~v-~~~DsG~Y~C~~~~~~----s~~ 75 (204)
T 1sy6_A 17 EDGSVLLTCDA---EAKNITWFKDGKMIGFL-------------TEDKKKWNLGSN-AKDPRGMYQCKGSQNK----SKP 75 (204)
T ss_dssp SSSEEEEEECS---CSSEEEEEETTEEEEEE-------------ESSCCCEEEEEG-GGCCEEEEEEESSSSC----CCC
T ss_pred CCCeEEEEEcC---CCCEEEEEECCEECCCC-------------CCCCCeEEeCCC-CcCCCEEEEEEecCCC----Cee
Confidence 35889999998 78999999999876311 113567888875 8999999999987643 233
Q ss_pred eEEeeee--------------------------e---cccccCCCCceee-cCCCeEEEecCCCCCCcceEEEeeccccc
Q psy14896 288 VQLAFGF--------------------------I---GEFNLKRAPEIGN-QNWGKAMFCDPPTNYPGVNYYWARDYFPN 337 (813)
Q Consensus 288 ~~l~v~~--------------------------~---~~~~~~~~~~~~~-~~~~~~l~C~~~~~~p~~~v~W~k~~~~~ 337 (813)
+.|.|.. . +...+...+..+. +|+.++|.|. +.|.+.++|+|++.++
T Consensus 76 ~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~G~~v~L~C~---g~p~p~i~W~k~~~~l 152 (204)
T 1sy6_A 76 LQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCP---QYPGSEILWQHNDKNI 152 (204)
T ss_dssp EEEEEEC------------------------------------CCCCEEEEETTEEEEECS---CCCSSCEEEEETTEEE
T ss_pred EEEEEEEeccccccccccccccccccccccccccccccccceecCCceeeecCCcEEEEcC---CCCCCceEEEECCEEC
Confidence 4444430 0 0111122233444 8999999998 6799999999999875
Q ss_pred cccCCccEEEccCccEEEeee-eecCCeeeEEEEeeeccccCCCCCceeeEE
Q psy14896 338 FVEEDKRVFVSYDGALYFSAL-EQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388 (813)
Q Consensus 338 ~~~~~~~~~~~~~~~L~i~~v-~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v 388 (813)
......+.....+++|.|.++ +.+|+|.|+|.|.|..|.. .+..+.|.+
T Consensus 153 ~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~--~s~~l~l~~ 202 (204)
T 1sy6_A 153 GGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPED--ANFYLYLRA 202 (204)
T ss_dssp SCCTTCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGGG--SSCEEEEEE
T ss_pred CCccCCceEecCCCEEEEeeCCccccCEEEEEEeccCCCCc--eeEEEEEEE
Confidence 443233333335789999999 9999999999999998842 233345544
No 285
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.80 E-value=9.5e-20 Score=177.10 Aligned_cols=172 Identities=17% Similarity=0.182 Sum_probs=118.7
Q ss_pred CCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcc------------cCCCeEEEeeCc---cEEEEeecccCCeeEE
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV------------EEDKRVFVSYDG---ALYFSALEQIDAGNYS 640 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~------------~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~ 640 (813)
....+.+|+.++|.|.+ .+.|.+.|.|+|++....+ ....++.+..++ +|.|.+++.+|+|.|+
T Consensus 9 ~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (213)
T 3d9a_L 9 ATLSVTPGNSVSLSCRA-SQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYF 87 (213)
T ss_dssp SEEEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred ccEEEeCCCcEEEEEEC-CCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEE
Confidence 44567889999999999 7888889999986421111 112456555433 6999999999999999
Q ss_pred EEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecC-CCCC-eEEEEeCCcccCCC-c
Q psy14896 641 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG-YPVP-SYNWTRRGSPLPRN-A 717 (813)
Q Consensus 641 C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g-~P~p-~i~W~k~g~~l~~~-~ 717 (813)
|.|.|..|..... ...|.|...+....+.+. .....+..|+.++|.|.+.| .|+| .|+|+|+|.++..+ .
T Consensus 88 C~~~~~~~~~~~~--~~~l~V~~~~~~p~v~~~-----~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~ 160 (213)
T 3d9a_L 88 CQQSNSWPYTFGG--GTKLEIKRADAAPTVSIF-----PPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL 160 (213)
T ss_dssp EEECSSSSCEECC--CEEEEECCCCBCCEEEEE-----CCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEE
T ss_pred EeeecCCcceeCC--CEEEEEecCCCCceeEeE-----CCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceee
Confidence 9999987643222 245666652211111110 00122347999999999997 6665 89999999988766 1
Q ss_pred ee-----e-----ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEE
Q psy14896 718 YF-----E-----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 755 (813)
Q Consensus 718 ~~-----~-----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 755 (813)
.. . ...+.|.|.++..+|+|.|+|.|.|..........
T Consensus 161 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3d9a_L 161 NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKS 208 (213)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEEE
T ss_pred ecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceEEE
Confidence 10 0 11348999999999999999999998766533333
No 286
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.79 E-value=2.2e-19 Score=174.52 Aligned_cols=164 Identities=18% Similarity=0.189 Sum_probs=114.0
Q ss_pred CCCceeccCCCceEEeCCCCCCCccEEEEccCC--CCCcc----------cCCCeEEEeeCc---cEEEEeecccCCeeE
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDY--FPNFV----------EEDKRVFVSYDG---ALYFSALEQIDAGNY 639 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~--~~~~~----------~~~~~~~~~~~~---~L~i~~~~~~d~G~Y 639 (813)
+....+.+|+.++|.|.+ .+.|.+.|.|+|++ ..... ....++.+..++ +|.|.+++.+|+|.|
T Consensus 8 p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (213)
T 3nl4_L 8 PASVSEPVGGTVTIKCQA-SQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATY 86 (213)
T ss_dssp CSEEEEETTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CCeEEEcCCCCEEEEEEe-cCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEE
Confidence 344667889999999999 67789999999953 11100 113455554333 699999999999999
Q ss_pred EEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecC-CCCCeEEEEeCCcccCCCc-
Q psy14896 640 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG-YPVPSYNWTRRGSPLPRNA- 717 (813)
Q Consensus 640 ~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g-~P~p~i~W~k~g~~l~~~~- 717 (813)
+|.|.|..+..........|.|...+....+.. ......+.+|+.++|.|.+.| .|.|.|+|+|+|..+..+.
T Consensus 87 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~-----~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~ 161 (213)
T 3nl4_L 87 YCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLI-----FPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIE 161 (213)
T ss_dssp EEEECCSSTTTCEECCCEEEEEECCCBCCEEEE-----ECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEE
T ss_pred EEecCCCCceeEEeCCCeEEEEeCCCcCCeEEE-----eCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCee
Confidence 999999776311222234566643222211111 011133567999999999998 8999999999999886532
Q ss_pred ----------eeeecceEEEECCCCCCCCEEEEEEEE
Q psy14896 718 ----------YFENFNRILTIPNVKVEDQGEYICRAS 744 (813)
Q Consensus 718 ----------~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 744 (813)
......+.|.|.++..+|+|.|+|.|.
T Consensus 162 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 162 NSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred cccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 011113579999999999999999999
No 287
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.79 E-value=2.5e-19 Score=173.64 Aligned_cols=169 Identities=14% Similarity=0.132 Sum_probs=115.7
Q ss_pred CCCceeccCCCceEEeCCCCCCCccEEEEccCC--CCC----------cccCCCeEEEeeCc---cEEEEeecccCCeeE
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDY--FPN----------FVEEDKRVFVSYDG---ALYFSALEQIDAGNY 639 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~--~~~----------~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y 639 (813)
+.+..+.+|+.++|.|.+ .+.|.+.|.|+|++ ... ......++.+..++ +|.|.+++.+|+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 85 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKA-SESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIY 85 (210)
T ss_dssp CSEEEECTTSCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCcEEEcCCCCEEEEeeC-CCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEE
Confidence 345567889999999999 68888899999953 221 00113455554333 699999999999999
Q ss_pred EEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecC-CCCC-eEEEEeCCcccCCC-
Q psy14896 640 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG-YPVP-SYNWTRRGSPLPRN- 716 (813)
Q Consensus 640 ~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g-~P~p-~i~W~k~g~~l~~~- 716 (813)
+|.|.|..+..... ...|.|...+....+.+ ......+..|+.++|.|.+.| .|++ .|+|+|||.++..+
T Consensus 86 ~C~~~~~~~~~~~~--~~~l~V~~~~~~P~v~~-----~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~ 158 (210)
T 1lk3_L 86 FCQQSWNGPLTFGA--GTKLELKRADAAPTVSI-----FPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGV 158 (210)
T ss_dssp EEEECSSSSCEECC--CEEEEECCCCBCCEEEE-----ECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTE
T ss_pred EEEEEcCCCceeCC--CEEEEEcCCCcCCeEEE-----ECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCc
Confidence 99999977632221 24566665221111111 000122347999999999997 4554 89999999988765
Q ss_pred ce---e-e-e-----cceEEEECCCCCCCCEEEEEEEEcCCCceE
Q psy14896 717 AY---F-E-N-----FNRILTIPNVKVEDQGEYICRASNDRSALE 751 (813)
Q Consensus 717 ~~---~-~-~-----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 751 (813)
.. . . . ..+.|.|.++..+|+|.|+|.|.|......
T Consensus 159 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 203 (210)
T 1lk3_L 159 LDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSP 203 (210)
T ss_dssp EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSC
T ss_pred eEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCCe
Confidence 11 1 1 1 123799999999999999999999876443
No 288
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.78 E-value=1.3e-18 Score=164.50 Aligned_cols=161 Identities=16% Similarity=0.160 Sum_probs=114.1
Q ss_pred cccEEEEeeeccCCCCeEEEeeccccccccccc-c---cccCCCccEEee-------CCeEEEcCCccccCCeeEEEEee
Q psy14896 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN-L---IDPLSDKRFTLS-------GGNLIINDPRQVEDRGSYHCKAS 277 (813)
Q Consensus 209 g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~-~---~~~~~~~~~~~~-------~~~l~i~~~~~~~d~G~Y~C~a~ 277 (813)
|++++|.|.+.+.|.+.|.|+|++..+...... . -......++... +.+|.|.+. +.+|+|.|+|.|.
T Consensus 10 G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v-~~~D~G~Y~C~~~ 88 (184)
T 2ny1_B 10 GDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNL-KIEDSDTYICEVE 88 (184)
T ss_dssp TSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSC-CGGGCEEEEEEET
T ss_pred CCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecC-CHHHCEEEEEEEE
Confidence 477999999999999999999998642110000 0 001112333332 234888885 8999999999999
Q ss_pred cCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEccCccEEEee
Q psy14896 278 NKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSA 357 (813)
Q Consensus 278 n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~ 357 (813)
|..| .+.|.|...+ ......+.+|+.++|.|.+ .+.|.+.++|++++..+ ....+.|.|.+
T Consensus 89 ~~~~-----~~~l~V~~~~----~~~~~~v~~g~~~~l~C~~-~~~p~~~v~W~~~~~~~---------~~~~~~L~i~~ 149 (184)
T 2ny1_B 89 DQKE-----EVQLLVFGLT----ANSDTHLLQGQSLTLTLES-PPGSSPSVQCRSPRGKN---------IQGGKTLSVSQ 149 (184)
T ss_dssp TEEE-----EEEEEEEEEE----ESSCSEEETTCCEEEEEEC-CTTCCCEEEEECTTSCE---------EEESSEEEESS
T ss_pred cCCC-----cEEEEEEEec----CCCCceeecCCCEEEEEEc-CCCCCCEEEEEeCCCcc---------ccCceEEEEec
Confidence 9865 3455555422 1334577899999999996 45699999999998753 23567899999
Q ss_pred eeecCCeeeEEEEeeeccccCCCCCceeeEEccCC
Q psy14896 358 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS 392 (813)
Q Consensus 358 v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~ 392 (813)
++.+|+|.|+|.|.|..+... ..+.|.|...|
T Consensus 150 v~~~d~G~Y~C~a~n~~~~~~---~~~~l~V~~~p 181 (184)
T 2ny1_B 150 LELQDSGTWTCTVLQNQKKVE---FKIDIVVLAFQ 181 (184)
T ss_dssp CCGGGCEEEEEEEEETTEEEE---EEEEEEEECCC
T ss_pred CCcCCCeEEEEEEEECCceEE---EEEEEEEEecC
Confidence 999999999999998765433 23677776543
No 289
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.78 E-value=1.5e-18 Score=166.53 Aligned_cols=180 Identities=14% Similarity=0.162 Sum_probs=119.7
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEE--eeCCeEEEcCCccc
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFT--LSGGNLIINDPRQV 266 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~ 266 (813)
+|.|...|. ..+.+| ++++|.|.+.+ |.+.+.|||+|..+..... ..+.. ..++.|.|.+. +.
T Consensus 8 ~P~i~~~p~-~~v~~G-----~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~-------~~~~~~~~~~~~l~I~~v-~~ 72 (201)
T 1nkr_A 8 KPSLLAHPG-PLVKSE-----ETVILQCWSDV-MFEHFLLHREGMFNDTLRL-------IGEHHDGVSKANFSISRM-TQ 72 (201)
T ss_dssp CCEEEEESC-SEEETT-----CCEEEEEEESS-CCSEEEEEEESSSCEEEEE-------ECEEETTEEEEEEEESSC-CG
T ss_pred CCeEEEEcC-CccCCC-----CcEEEEEeccC-CCCEEEEEECCCcCCccee-------eeecCCCCceEEEEeccC-Cc
Confidence 588888886 556666 77999999985 8889999999976532100 00011 23466888775 89
Q ss_pred cCCeeEEEEeecCc----eeeEeeeeEEeeeee---cccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccc
Q psy14896 267 EDRGSYHCKASNKF----GSIISESVQLAFGFI---GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV 339 (813)
Q Consensus 267 ~d~G~Y~C~a~n~~----g~~~s~~~~l~v~~~---~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~ 339 (813)
+|+|.|+|.|.|.. +...+..+.|.|... |.+...+. ..+.+|+.++|.|.+. + |.+.+.|+|+|..+..
T Consensus 73 ~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~-~-~~~~~~w~k~g~~~~~ 149 (201)
T 1nkr_A 73 DLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSR-S-SYDMYHLSREGEAHER 149 (201)
T ss_dssp GGCEEEEEEEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEES-S-CCSEEEEEETTCSSCE
T ss_pred ccCeEEEEeEecCCCCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCC-C-CCceEEEEECCcccCc
Confidence 99999999998643 223356677777653 22333333 4678999999999964 3 5689999999987533
Q ss_pred cCCccEEEc--cCccEEEeeeeecCCeeeEEEEeeeccc--cCCCCCceeeEE
Q psy14896 340 EEDKRVFVS--YDGALYFSALEQIDAGNYSCNVQSKVSD--TGRNGPFFPLKV 388 (813)
Q Consensus 340 ~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~a~n~~g~--~~~~s~~~~l~v 388 (813)
......... ..+.|.|.+++ |+|.|+|.|.+.... ....+..+.|.|
T Consensus 150 ~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~~~~~~s~~S~~~~l~V 200 (201)
T 1nkr_A 150 RLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHDSPYEWSKSSDPLLVSV 200 (201)
T ss_dssp EEECEEEETTEEEEEEEEEECC--SCEEEEEEEEETTEEEEECCCCCCEEEEE
T ss_pred ccccccccCCceEEEEEeCCcC--CCeeEEEEEEcCCCCCcCCCCCCCEEEEe
Confidence 211111111 14589999998 999999999865321 223345555554
No 290
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.78 E-value=4.5e-19 Score=177.65 Aligned_cols=186 Identities=18% Similarity=0.204 Sum_probs=122.9
Q ss_pred CceeccCCCceEEeCCCCCCC--ccEEEEccCC--CCCcc--------------cCCCeEEEeeC-----ccEEEEeecc
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYP--GVNYYWARDY--FPNFV--------------EEDKRVFVSYD-----GALYFSALEQ 633 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~--~~~~~--------------~~~~~~~~~~~-----~~L~i~~~~~ 633 (813)
+..+.+|+.++|.|.+ .+.| .+.|.|+|++ ..... ....|+.+..+ .+|+|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~-~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (257)
T 1f3r_B 9 PGLVRPSETLSLTCTV-SGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQT 87 (257)
T ss_dssp CSEECTTSEEEEEEEE-ESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCT
T ss_pred CccccCCceEEEEEEE-ecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCc
Confidence 4567889999999999 5664 6899999963 22110 01346666542 3699999999
Q ss_pred cCCeeEEEEEEeeecC------ccccCceeeEEEccCCCcc------ccccC-CCCCCCCCcCCCCCCeEEEEEEecCCC
Q psy14896 634 IDAGNYSCNVQSKVSD------TGRNGPFFPLKVFPHSNFQ------QLKFP-NNFPKTFPEAPKAGDKVRLECVAFGYP 700 (813)
Q Consensus 634 ~d~G~Y~C~a~n~~g~------~~~~~~~~~l~v~~~p~~~------~~~~p-~~~~~~~~~~~~~G~~v~l~C~~~g~P 700 (813)
+|+|.|.|.|.|..|. .........|.|..++... ....+ .....+....+.+|++++|.|.+.+.|
T Consensus 88 ~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~ 167 (257)
T 1f3r_B 88 DDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNI 167 (257)
T ss_dssp TCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCC
T ss_pred ccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcC
Confidence 9999999999998641 1111123567887654110 00000 011112235688999999999999999
Q ss_pred CCeEEEEe--CCcccCC------------Cceee----ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCC
Q psy14896 701 VPSYNWTR--RGSPLPR------------NAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 762 (813)
Q Consensus 701 ~p~i~W~k--~g~~l~~------------~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 762 (813)
.|.|.|+| +|..+.. ..++. ....+|+|.+++.+|+|.|.|.|.|....-.....|.|..++
T Consensus 168 ~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V~~~~ 247 (257)
T 1f3r_B 168 NNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLELKAAE 247 (257)
T ss_dssp BTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEECCSSSC
T ss_pred CCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEEEeCCC
Confidence 99999999 6664410 12221 234579999999999999999999974111224566666554
Q ss_pred c
Q psy14896 763 N 763 (813)
Q Consensus 763 ~ 763 (813)
.
T Consensus 248 ~ 248 (257)
T 1f3r_B 248 Q 248 (257)
T ss_dssp C
T ss_pred c
Confidence 3
No 291
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.78 E-value=1.5e-18 Score=166.95 Aligned_cols=160 Identities=16% Similarity=0.101 Sum_probs=112.8
Q ss_pred CceeecCCCccccccEEEEeeeccCCC-----CeEEEeecccccccccccccccCCCccEEee-------CCeEEEcCCc
Q psy14896 197 TDVVFDLSKRSILNDITLSCYAGGYPN-----PSYEWFKEDYVQDRLVANLIDPLSDKRFTLS-------GGNLIINDPR 264 (813)
Q Consensus 197 ~~~~v~~g~~~~g~~v~l~C~~~g~P~-----p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~-------~~~l~i~~~~ 264 (813)
..+.+.+| +++.|.|.+.+.|. +.|.|+|++..+. ....++.+. +.+|.|.+.
T Consensus 10 ~~v~v~~G-----~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~---------~~~~r~~~~~~~~~~~~~~L~I~~v- 74 (202)
T 3bp6_B 10 EVYTVDVG-----SSVSLECDFDRRECTELEGIRASLQKVENDTS---------LQSERATLLEEQLPLGKALFHIPSV- 74 (202)
T ss_dssp SEEEEETT-----SCEEEEEEECTTC---CTTEEEEEEECC--CC---------CBCSSCEECGGGGGGTEEEEEECSC-
T ss_pred cCEEEeCC-----CcEEEEEEecCCCCCCccceEEEEEcCCCccc---------ccCCceEEeeccccCCeeEEEECCC-
Confidence 45666666 77999999999886 8999999443321 112222221 256888875
Q ss_pred cccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCcc
Q psy14896 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKR 344 (813)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~ 344 (813)
+.+|+|.|+|.|.|..|.. +..+.|.|..++..... ......+|+.+.|.|.+ .|.|.|.+.|++++.++. ..
T Consensus 75 ~~~D~G~Y~C~~~~~~~~~-~~~~~l~V~~~~~~p~~-~~~~~~~g~~v~l~C~~-~g~P~p~v~W~~~~~~~~----~~ 147 (202)
T 3bp6_B 75 QVRDSGQYRCLVICGAAWD-YKYLTVKVKASYMRIDT-RILEVPGTGEVQLTCQA-RGYPLAEVSWQNVSVPAN----TS 147 (202)
T ss_dssp CGGGCEEEEEEEEETTEEE-EEEEEEEEEBCCCCEEE-EEEECTTTCCEEEEEEE-EEBSCCEEEETTCCSCCE----EE
T ss_pred CHHHCcEEEEEEEeCCCcc-eEEEEEEecCCCCcccE-EEEecCCCCeEEEEEEc-cccCCceEEEEeCCCCcc----Cc
Confidence 8999999999999998876 67788887654321110 11134568889999997 779999999999987642 22
Q ss_pred EEEccCc---cEEEeeeeecCCeeeEEEEeeeccccC
Q psy14896 345 VFVSYDG---ALYFSALEQIDAGNYSCNVQSKVSDTG 378 (813)
Q Consensus 345 ~~~~~~~---~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 378 (813)
.....++ .+.|.++..+|+|.|+|.|.|..|...
T Consensus 148 ~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~ 184 (202)
T 3bp6_B 148 HIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKEL 184 (202)
T ss_dssp EEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEE
T ss_pred eeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccc
Confidence 3333444 456779999999999999999988643
No 292
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.77 E-value=7.4e-19 Score=164.65 Aligned_cols=155 Identities=12% Similarity=0.084 Sum_probs=112.6
Q ss_pred CceeccCCCceEEeCCCCCCCccEEEEccC-CCCCc----------ccCC--CeEEE-eeCccEEEEeecccCCeeEEEE
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYPGVNYYWARD-YFPNF----------VEED--KRVFV-SYDGALYFSALEQIDAGNYSCN 642 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~-~~~~~----------~~~~--~~~~~-~~~~~L~i~~~~~~d~G~Y~C~ 642 (813)
+..+.+|++++|.|.+....+.+.|.|+|+ +..+. .... .|+.+ ..+++|+|.+++.+|+|.|+|.
T Consensus 8 ~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C~ 87 (180)
T 2dru_A 8 NVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYMR 87 (180)
T ss_dssp EEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEEE
T ss_pred eEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEEE
Confidence 456788999999999843345789999995 32111 1111 57777 5678899999999999999999
Q ss_pred EEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEe-cCCCCCeEEEEeCCcccCCCceeee
Q psy14896 643 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-FGYPVPSYNWTRRGSPLPRNAYFEN 721 (813)
Q Consensus 643 a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~-~g~P~p~i~W~k~g~~l~~~~~~~~ 721 (813)
+.+.. .....+.|.|..++..+.+ ...+++++|.|.+ .| |.|.|+|+|+|..|. ..
T Consensus 88 v~~~~----~~~~~~~L~V~~~~~~P~i-------------~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~-----~~ 144 (180)
T 2dru_A 88 MLHET----EDQWKITMEVYEMVSKPMI-------------YWECSNATLTCEVLEG-TDVELKLYQGKEHLR-----SL 144 (180)
T ss_dssp EESSS----EEEEEEEEEEECCCCCCEE-------------EEEGGGTEEEEECSSC-TTCEEEEEETTEEEE-----EE
T ss_pred EEcCC----eEEEEEEEEEECCCCCCEE-------------EecCCCEEEEEEeCCC-CCCEEEEEECCeECc-----CC
Confidence 97654 2233467888765432221 1234679999999 56 999999999999885 12
Q ss_pred cceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEE
Q psy14896 722 FNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 756 (813)
Q Consensus 722 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 756 (813)
.+.+|.+.. .+|+|.|+|.|.|.+|..++...+
T Consensus 145 ~~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 145 RQKTMSYQW--TNLRAPFKCKAVNRVSQESEMEVV 177 (180)
T ss_dssp SSSEEEEEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred CCCEEEEEE--hhcCccEEEEEecCcCccccceeE
Confidence 345677733 789999999999999987776654
No 293
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.77 E-value=4.1e-19 Score=164.86 Aligned_cols=153 Identities=13% Similarity=0.118 Sum_probs=112.8
Q ss_pred ceeccCCCceEEeCCCCCCCccEEEEccCCCCCccc----------CCCeEEEe-eCccEEEEeecccCCeeEEEEEEee
Q psy14896 578 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE----------EDKRVFVS-YDGALYFSALEQIDAGNYSCNVQSK 646 (813)
Q Consensus 578 ~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~----------~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~a~n~ 646 (813)
..+.+|+.++|.|.+ .+ |.+.|.|+|++..+... -..|+.+. .+++|+|.+++.+|+|.|+|.|.|.
T Consensus 5 v~~~~G~~VtL~c~~-~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 5 IYGVVYGNVTFHVPS-NV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEETTCCEEECCCC-SS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EEEEcCCCEEEcCCC-CC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 456789999999998 44 88999999987532111 12355553 6789999999999999999999988
Q ss_pred ecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeeecceEE
Q psy14896 647 VSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRIL 726 (813)
Q Consensus 647 ~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L 726 (813)
.| ...+.|.|..++..+.+.... .. .+|.|.+.|.|.|.|+|+|+|..|.... ...|
T Consensus 83 ~~-----~~~~~L~V~~~~~~p~i~~~~----------~~---~~L~C~~~~~p~p~i~W~~~~~~l~~~~-----~~~l 139 (171)
T 1ccz_A 83 TD-----TMKFFLYVLEMVSKPMIYWEC----------SN---ATLTCEVLEGTDVELKLYQGKEHLRSLR-----QKTM 139 (171)
T ss_dssp CS-----CEEEEEEEECCCCCCEEEEET----------TT---TEEEEECSSCSSCEEEEEETTEEEEEES-----SSEE
T ss_pred CC-----cEEEEEEEECcCCCCEEEEec----------CC---cEEEEEeCCCCCcEEEEEECCEECcCCc-----ceEE
Confidence 76 334778887765433221110 01 2799999999999999999999886432 2344
Q ss_pred EECCCCCCCCEEEEEEEEcCCCceEEEEEEE
Q psy14896 727 TIPNVKVEDQGEYICRASNDRSALESSVTIS 757 (813)
Q Consensus 727 ~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 757 (813)
.+.+ ..|+|.|+|.|.|.+|..+..+.|.
T Consensus 140 ~~~~--~~~~g~Y~C~a~N~~~~~~~~~~l~ 168 (171)
T 1ccz_A 140 SYQW--TNLRAPFKCKAVNRVSQESEMEVVN 168 (171)
T ss_dssp EEEC--SCCSSCEEEEEEETTEEEEEEECCC
T ss_pred EEec--cCCCceEEEEEEcccCcccceeEEe
Confidence 4443 7899999999999999988877664
No 294
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.77 E-value=6.5e-19 Score=171.16 Aligned_cols=178 Identities=21% Similarity=0.246 Sum_probs=118.8
Q ss_pred eeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeeccc--ccccccc--cccccCCCccEEee----CCeEEEcCC
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY--VQDRLVA--NLIDPLSDKRFTLS----GGNLIINDP 263 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~--~l~~~~~--~~~~~~~~~~~~~~----~~~l~i~~~ 263 (813)
++..|..+.+.+| ++++|.|.+.|.|.+.|.|||++. .+..... .........++... +.+|.|.+.
T Consensus 4 v~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 78 (213)
T 3d9a_L 4 LTQSPATLSVTPG-----NSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSV 78 (213)
T ss_dssp EEEECSEEEECTT-----CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSC
T ss_pred EEeCCccEEEeCC-----CcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCC
Confidence 4455777888777 679999999999999999999652 1100000 00011112344443 226888875
Q ss_pred ccccCCeeEEEEeecCceeeEeeeeEEeeee---ecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEEeeccccccc
Q psy14896 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGF---IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPNFV 339 (813)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~---~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~k~~~~~~~ 339 (813)
+.+|+|.|+|.|.|..+...+..+.|.|.. +|.+.+.........|+.++|.|.+.++.|.+ .++|+|||+++..
T Consensus 79 -~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~ 157 (213)
T 3d9a_L 79 -ETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 157 (213)
T ss_dssp -CGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred -ChhhCEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcc
Confidence 899999999999998876555556677754 34444434444445788899999975446765 8999999987432
Q ss_pred cCC--ccEEEccC------ccEEEeeeeecCCeeeEEEEeeecc
Q psy14896 340 EED--KRVFVSYD------GALYFSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 340 ~~~--~~~~~~~~------~~L~i~~v~~~D~G~Y~C~a~n~~g 375 (813)
... .......+ +.|.|.++..+|+|.|+|.|.|...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 201 (213)
T 3d9a_L 158 GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 201 (213)
T ss_dssp TEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTC
T ss_pred eeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccC
Confidence 200 11111112 3799999999999999999999764
No 295
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.77 E-value=1.9e-18 Score=172.76 Aligned_cols=178 Identities=16% Similarity=0.219 Sum_probs=122.4
Q ss_pred CCceeccCCCceEEeCCCCCCC--ccEEEEccCC--CCCc--c-------------cCCCeEEEeeC-----ccEEEEee
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYP--GVNYYWARDY--FPNF--V-------------EEDKRVFVSYD-----GALYFSAL 631 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~--~~~~--~-------------~~~~~~~~~~~-----~~L~i~~~ 631 (813)
.+..+.+|+.++|.|.+ .+.| .+.|.|+|++ .... . ....|+.+..+ .+|+|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~-~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (256)
T 1nqb_A 8 GAELVKPGASVKLSCKA-SGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSL 86 (256)
T ss_dssp CCEEECTTCCEEEEEEE-CSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCeeecCCCcEEEEEEe-ccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcC
Confidence 44567889999999998 5665 6799999953 2110 0 11356666542 36999999
Q ss_pred cccCCeeEEEEEEeeecC--ccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCC-----eE
Q psy14896 632 EQIDAGNYSCNVQSKVSD--TGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP-----SY 704 (813)
Q Consensus 632 ~~~d~G~Y~C~a~n~~g~--~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p-----~i 704 (813)
+.+|+|.|.|.|.|..|. .......+.|.|..+|.+.. .+....+.+|++++|.|.+.|.|+| .|
T Consensus 87 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~--------~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v 158 (256)
T 1nqb_A 87 TSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQ--------TPLSLPVSLGDQASISCRSSQSIVHSNGNTYL 158 (256)
T ss_dssp CGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEE--------ECSEEEECTTCCEEEEEEESSCCBCTTSCBCE
T ss_pred ChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEe--------cCcEEEEecCCcEEEEeEecCcccccccceEE
Confidence 999999999999998763 11122335677776654322 1122567899999999999999875 99
Q ss_pred EEEe--CCcccC------------CCceee----ecceEEEECCCCCCCCEEEEEEEEcCCCce-EEEEEEEEEcCC
Q psy14896 705 NWTR--RGSPLP------------RNAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSAL-ESSVTISIQAEP 762 (813)
Q Consensus 705 ~W~k--~g~~l~------------~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~-~~~~~l~V~~~P 762 (813)
+|+| +|..+. ...++. ....+|+|.+++.+|+|.|+|.|.|..+.. .....|.|..++
T Consensus 159 ~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~~ 235 (256)
T 1nqb_A 159 EWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRAA 235 (256)
T ss_dssp EEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC--
T ss_pred EEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEECCC
Confidence 9999 666541 011221 224579999999999999999999864322 234567776443
No 296
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.77 E-value=1.5e-18 Score=168.64 Aligned_cols=179 Identities=15% Similarity=0.184 Sum_probs=120.0
Q ss_pred ceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeec--ccccccccc--cccccCCCccEEee----CCeEEEcC
Q psy14896 191 YFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE--DYVQDRLVA--NLIDPLSDKRFTLS----GGNLIIND 262 (813)
Q Consensus 191 ~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~--g~~l~~~~~--~~~~~~~~~~~~~~----~~~l~i~~ 262 (813)
.++..| .+.+.+| ++++|.|.+.+.|.+.|.|||. +........ .........++... +.+|.|.+
T Consensus 3 ~v~~~~-~~~v~~G-----~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 76 (213)
T 3mj8_L 3 TLTQPP-LVSVALG-----QKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISK 76 (213)
T ss_dssp CBBCCS-EEEEETT-----SCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESS
T ss_pred eEEeCC-cEEEeCC-----CCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECC
Confidence 444455 6777777 7799999999999999999993 322211000 00011123344432 34688888
Q ss_pred CccccCCeeEEEEeecCce--eeEeeeeEEeee----eecccccCCCCceeecCCCeEEEecCCCCCCc-ceEEEeeccc
Q psy14896 263 PRQVEDRGSYHCKASNKFG--SIISESVQLAFG----FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYF 335 (813)
Q Consensus 263 ~~~~~d~G~Y~C~a~n~~g--~~~s~~~~l~v~----~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~v~W~k~~~ 335 (813)
. +.+|+|.|+|.|.|..| ...+..+.|.|. .+|.+.+......+..|+.++|.|.+....|+ +.++|+|||.
T Consensus 77 v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~ 155 (213)
T 3mj8_L 77 A-QAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGT 155 (213)
T ss_dssp C-CGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred C-ChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCc
Confidence 5 89999999999999887 344667788887 44555554545555578899999997544455 5999999998
Q ss_pred cccccC--CccEE----EccCccEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 336 PNFVEE--DKRVF----VSYDGALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 336 ~~~~~~--~~~~~----~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
++.... ..... ....+.|.|.++..+|+|.|+|.|.|..+.
T Consensus 156 ~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 202 (213)
T 3mj8_L 156 PITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNT 202 (213)
T ss_dssp EECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEE
T ss_pred ccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCcc
Confidence 753210 00011 011245899999999999999999998753
No 297
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.76 E-value=5.7e-18 Score=171.09 Aligned_cols=189 Identities=16% Similarity=0.207 Sum_probs=122.9
Q ss_pred CceeeCCCceeecCCCccccccEEEEeeec---cCCCCeEEEeeccccccccccc--------ccccCCCccEEee----
Q psy14896 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAG---GYPNPSYEWFKEDYVQDRLVAN--------LIDPLSDKRFTLS---- 254 (813)
Q Consensus 190 P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~---g~P~p~v~W~k~g~~l~~~~~~--------~~~~~~~~~~~~~---- 254 (813)
+.+...|..+.+.+| ++++|.|.+. +.|.+.|.|+|++......... ........++.+.
T Consensus 6 ~~v~~~~~~~~v~~G-----~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 80 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVG-----ESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTF 80 (268)
T ss_dssp ------CCEEEEETT-----CCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTT
T ss_pred cccccCCCceEEecC-----CcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCC
Confidence 445566677887777 7799999997 7788899999987543111000 0001112344432
Q ss_pred --CCeEEEcCCccccCCeeEEEEeecCceee-EeeeeEEeeeeecccccCCCCceeecCCCeEEEecC--CCCCCcceEE
Q psy14896 255 --GGNLIINDPRQVEDRGSYHCKASNKFGSI-ISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDP--PTNYPGVNYY 329 (813)
Q Consensus 255 --~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~-~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~--~~~~p~~~v~ 329 (813)
+++|.|.+. +.+|+|.|+|.|.|..+.. .+..+.|.|. + ..+....+.+|+.++|.|.+ ..+.|.+.++
T Consensus 81 ~~~~~L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~--~---~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~ 154 (268)
T 3mj6_A 81 HNDGSLLLQDV-QKADEGIYTCEIRLKNESMVMKKPVELWVL--P---EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVN 154 (268)
T ss_dssp TTBCCEEECSC-CGGGCEEEEEEEEETTCCCEEEEEEEEEEE--C---CCCSEEEEETTCCEEECCBCEESSSSCCCEEE
T ss_pred CCEEEEEECCC-CHhHCEEEEEEEEecCCcceEEEEEEEEEe--c---cCCCccccccCCcEEEEEEecCCCCCCccceE
Confidence 367888885 8999999999999865543 3445666554 1 12335677889999999997 3678999999
Q ss_pred Eeeccccccc--------------------cCCccEEE-----ccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCce
Q psy14896 330 WARDYFPNFV--------------------EEDKRVFV-----SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384 (813)
Q Consensus 330 W~k~~~~~~~--------------------~~~~~~~~-----~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~ 384 (813)
|++++..... ....++.+ ..+++|.|.+++.+|+|.|+|.|.|..|... ..+
T Consensus 155 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~---~~~ 231 (268)
T 3mj6_A 155 WMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESR---KTI 231 (268)
T ss_dssp EEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEE---EEE
T ss_pred EEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEE---EEE
Confidence 9995432100 01113333 2356899999999999999999999776533 337
Q ss_pred eeEEccCC
Q psy14896 385 PLKVFPHS 392 (813)
Q Consensus 385 ~l~v~~~~ 392 (813)
.|.|...+
T Consensus 232 ~l~V~~~~ 239 (268)
T 3mj6_A 232 VLHVVQDE 239 (268)
T ss_dssp EEEEECC-
T ss_pred EEEEEcCC
Confidence 77775443
No 298
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.76 E-value=1.6e-18 Score=169.39 Aligned_cols=170 Identities=18% Similarity=0.227 Sum_probs=119.7
Q ss_pred CceeccCCCceEEeCCCCCCCcc----EEEEccCCCCCccc-----------CCCeEEEee--------CccEEEEeecc
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYPGV----NYYWARDYFPNFVE-----------EDKRVFVSY--------DGALYFSALEQ 633 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p~~----~v~W~k~~~~~~~~-----------~~~~~~~~~--------~~~L~i~~~~~ 633 (813)
...+.+|+.++|.|.+..+.+.+ .|.|+|++....+. ...|+.+.. +++|.|.+++.
T Consensus 8 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~ 87 (221)
T 3eow_R 8 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRV 87 (221)
T ss_dssp CCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSC
T ss_pred cEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCCh
Confidence 44567899999999984444443 49999997532221 133444443 56799999999
Q ss_pred cCCeeEEEEEEeee-cCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeE-EEEEEec-CCCCCeEEEEeCC
Q psy14896 634 IDAGNYSCNVQSKV-SDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV-RLECVAF-GYPVPSYNWTRRG 710 (813)
Q Consensus 634 ~d~G~Y~C~a~n~~-g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v-~l~C~~~-g~P~p~i~W~k~g 710 (813)
+|+|.|+|.+.|.. |.. ...+.|.|..+|.+..... ....+|+.+ .|.|.+. |.|.|.|+|+|++
T Consensus 88 ~D~G~Y~C~~~~~~~~~~---~~~~~L~V~~~P~~~~~~~---------~~~~~g~~~~~l~C~~~~g~P~p~v~W~k~~ 155 (221)
T 3eow_R 88 EDEGSYTCLFVTFPQGSR---SVDIWLRVLAKPQNTAEVQ---------KVQLTGEPVPMARCVSTGGRPPAQITWHSDL 155 (221)
T ss_dssp CCCSCBEEEEEESSSCSC---EEECCCCCCCCCEEEEEEE---------CCCCCSSSCCEEEEEEESCSSCCCEEEECSS
T ss_pred HHCeEEEEEEEeCCCCce---EEEEEEEEEECCCceeecC---------CcccCCceEEEEEEECCCccCCCeeEEEeCC
Confidence 99999999999976 432 3345677777776543211 111678888 5999988 8999999999986
Q ss_pred cccCCCce-------eeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEE
Q psy14896 711 SPLPRNAY-------FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI 758 (813)
Q Consensus 711 ~~l~~~~~-------~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 758 (813)
........ .....+.|.|.++..+|+|.|+|.|.|..+.....+.|..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~~ 210 (221)
T 3eow_R 156 GGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVSL 210 (221)
T ss_dssp SCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEECC
T ss_pred CCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEEE
Confidence 54432221 1122467999999999999999999999887666555444
No 299
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.76 E-value=2.5e-18 Score=167.59 Aligned_cols=175 Identities=15% Similarity=0.206 Sum_probs=117.7
Q ss_pred CCCceeecCCCccccccEEEEeeeccCCCC---eEEEeeccccccccccc--------ccccCCCccEEe-------eCC
Q psy14896 195 QPTDVVFDLSKRSILNDITLSCYAGGYPNP---SYEWFKEDYVQDRLVAN--------LIDPLSDKRFTL-------SGG 256 (813)
Q Consensus 195 ~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p---~v~W~k~g~~l~~~~~~--------~~~~~~~~~~~~-------~~~ 256 (813)
.|..+.+.+| ++++|.|.+.+.|.+ .|.|+|++..+...... .+......++.+ .++
T Consensus 5 ~p~~vtv~~G-----~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 79 (218)
T 4frw_A 5 TSDVVTVVLG-----QDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDG 79 (218)
T ss_dssp CCSEEEEETT-----SCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBC
T ss_pred CCCeEEEEcC-----CCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeE
Confidence 3566777676 779999999988766 48999998755321110 111111222322 135
Q ss_pred eEEEcCCccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccC-CCCceeecCCCeEEEecCCCCCCcceEEEeeccc
Q psy14896 257 NLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYF 335 (813)
Q Consensus 257 ~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~-~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~ 335 (813)
+|.|.+. +.+|+|.|+|.+.|..+........+.+..++..... .....+..+..+.+.|.+ .|.|.|.|+|+|++.
T Consensus 80 sL~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~-~g~p~p~i~W~~~~~ 157 (218)
T 4frw_A 80 SVLLRNA-VQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTA-EGSPAPSVTWDTEVK 157 (218)
T ss_dssp CEEESSC-CGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEE-EEBSCCEEEEEESSC
T ss_pred EEEEeec-cHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeec-cCCcCceEEEEECCc
Confidence 6888885 8999999999999876655455555555444443332 334445566667888985 788999999999998
Q ss_pred cccccCCccEEEcc----CccEEEeeeeecCCeeeEEEEeeeccccC
Q psy14896 336 PNFVEEDKRVFVSY----DGALYFSALEQIDAGNYSCNVQSKVSDTG 378 (813)
Q Consensus 336 ~~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 378 (813)
++.. ........ .+.|.|.++..+|+|.|+|.|.|..|...
T Consensus 158 ~~~~--~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~ 202 (218)
T 4frw_A 158 GTTS--SRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQD 202 (218)
T ss_dssp CEEE--EEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSC
T ss_pred cccc--CceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeE
Confidence 7432 22222222 23699999999999999999999987643
No 300
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.76 E-value=1.9e-18 Score=167.42 Aligned_cols=177 Identities=18% Similarity=0.231 Sum_probs=116.5
Q ss_pred eeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecc--cccccccc--cccccCCCccEEee----CCeEEEcCC
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED--YVQDRLVA--NLIDPLSDKRFTLS----GGNLIINDP 263 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g--~~l~~~~~--~~~~~~~~~~~~~~----~~~l~i~~~ 263 (813)
++. |....+.+| ++++|.|.+.|.|.+.|.|||++ ..+..... .........++... +.+|.|.+.
T Consensus 4 v~q-p~~~~v~~G-----~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 77 (210)
T 1lk3_L 4 LTQ-PPALTVSPG-----EKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPV 77 (210)
T ss_dssp EEC-CSEEEECTT-----SCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEC-CCcEEEcCC-----CCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCC
Confidence 344 777887777 67999999999998999999964 22110000 00001122444433 226888875
Q ss_pred ccccCCeeEEEEeecCceeeEeeeeEEeeee---ecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEEeeccccccc
Q psy14896 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGF---IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPNFV 339 (813)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~---~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~k~~~~~~~ 339 (813)
+.+|+|.|+|.|.|..+...+..+.|.|.. +|.+.+.........|+.++|.|.+.+..|.+ .++|+|||+++..
T Consensus 78 -~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~ 156 (210)
T 1lk3_L 78 -EADDTAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRD 156 (210)
T ss_dssp -CGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCT
T ss_pred -CHHHCeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCC
Confidence 899999999999998876545555677654 23344333333445788899999975445654 9999999987532
Q ss_pred c--CCccEEEccCc------cEEEeeeeecCCeeeEEEEeeecc
Q psy14896 340 E--EDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 340 ~--~~~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g 375 (813)
. .........++ .|.|.++..+|+|.|+|.|.|...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 200 (210)
T 1lk3_L 157 GVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTS 200 (210)
T ss_dssp TEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred CceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCC
Confidence 2 00111112233 689999999999999999998754
No 301
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.76 E-value=4.3e-19 Score=172.14 Aligned_cols=167 Identities=17% Similarity=0.213 Sum_probs=116.4
Q ss_pred CceeccCCCceEEeCCCCCCCccEEEEccC--CCCCc--c--------cCCCeEEEee---CccEEEEeecccCCeeEEE
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYPGVNYYWARD--YFPNF--V--------EEDKRVFVSY---DGALYFSALEQIDAGNYSC 641 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~--~~~~~--~--------~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C 641 (813)
...+.+|+.++|.|.+. |.+.+.|+|+ +.... . ....++.+.. +++|.|.+++.+|+|.|+|
T Consensus 9 ~~~v~~G~~v~L~C~~~---~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 85 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT---SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYC 85 (211)
T ss_dssp EEEECTTCEEEEEEECC---CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEE
T ss_pred eEEEcCCCCEEEEEEEC---CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEE
Confidence 45678899999999983 8899999995 22110 0 0224555432 3469999999999999999
Q ss_pred EEEeeecCccccCceeeEEEcc----CCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCC--CCeEEEEeCCcccCC
Q psy14896 642 NVQSKVSDTGRNGPFFPLKVFP----HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYP--VPSYNWTRRGSPLPR 715 (813)
Q Consensus 642 ~a~n~~g~~~~~~~~~~l~v~~----~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P--~p~i~W~k~g~~l~~ 715 (813)
.|.|..|. ......+.|.|.. +|.+... | ....+.+|+.++|.|.+.|.+ .+.|+|+|||.++..
T Consensus 86 ~~~~~~~~-~~~~~~~~l~V~~~~~~~P~v~~~--~------~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 156 (211)
T 3tv3_L 86 GSLVGNWD-VIFGGGTKLTVLGQPKAAPSVTLF--P------PSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKA 156 (211)
T ss_dssp EEEETTTE-EEECCCEEEEECCSCCBCCEEEEE--C------CCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred EEecCCCc-eeECCCceEEEeCCCCcCCeeEec--C------CchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCC
Confidence 99998762 1112235677773 3322211 1 112334799999999999863 479999999998865
Q ss_pred Ccee----------eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEE
Q psy14896 716 NAYF----------ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 755 (813)
Q Consensus 716 ~~~~----------~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 755 (813)
+... ....+.|.|.++..+|+|.|+|+|.|..|....++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~~ 206 (211)
T 3tv3_L 157 GVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVA 206 (211)
T ss_dssp TEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEEC
T ss_pred CcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeecc
Confidence 3211 011257999999999999999999999877666554
No 302
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.76 E-value=2.2e-18 Score=167.41 Aligned_cols=174 Identities=16% Similarity=0.221 Sum_probs=117.9
Q ss_pred CceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecc--cccccccc--cccccCCCccEEee----CCeEEEc
Q psy14896 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED--YVQDRLVA--NLIDPLSDKRFTLS----GGNLIIN 261 (813)
Q Consensus 190 P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g--~~l~~~~~--~~~~~~~~~~~~~~----~~~l~i~ 261 (813)
|.|+..|..+.+.+| ++++|.|.+.+.|.+.|.|||++ ..+..... .........++... +.+|.|.
T Consensus 2 ~~v~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 76 (213)
T 3nl4_L 2 VVMTQTPASVSEPVG-----GTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTIS 76 (213)
T ss_dssp CCEEEECSEEEEETT-----CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEEC
T ss_pred ccEEeCCCeEEEcCC-----CCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEEC
Confidence 456667788888777 66999999999999999999963 21110000 00011123455433 2268888
Q ss_pred CCccccCCeeEEEEeecCcee--eEeeeeEEeeee---ecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeecccc
Q psy14896 262 DPRQVEDRGSYHCKASNKFGS--IISESVQLAFGF---IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFP 336 (813)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~--~~s~~~~l~v~~---~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~ 336 (813)
+. +.+|+|.|+|.|.|..+. ..+..+.|.|.. +|.+.+......+.+|+.++|.|.+..+.|.+.++|+|||.+
T Consensus 77 ~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~ 155 (213)
T 3nl4_L 77 DL-ECADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTT 155 (213)
T ss_dssp SC-CGGGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEE
T ss_pred CC-ChHHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCcc
Confidence 85 899999999999997764 334556666633 333333344445567888999999755589999999999987
Q ss_pred ccccC----------CccEEEccCccEEEeeeeecCCeeeEEEEe
Q psy14896 337 NFVEE----------DKRVFVSYDGALYFSALEQIDAGNYSCNVQ 371 (813)
Q Consensus 337 ~~~~~----------~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 371 (813)
+.... ...+. ..+.|.|.++..+|+|.|+|.|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~--~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 156 QTTGIENSKTPQNSADCTYN--LSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp CCSSEEEEECCCCTTTCCEE--EEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CCCCeecccCcccCCCCeEE--EEEEEEecHHHcCCCCeEEEEEE
Confidence 53211 11111 12468999999999999999998
No 303
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.76 E-value=1.5e-18 Score=173.06 Aligned_cols=175 Identities=19% Similarity=0.281 Sum_probs=112.3
Q ss_pred CceeccCCCceEEeCCCCCCCccE-----EEEccCCCCCccc---------------CCCeEE----EeeCccEEEEeec
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYPGVN-----YYWARDYFPNFVE---------------EDKRVF----VSYDGALYFSALE 632 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p~~~-----v~W~k~~~~~~~~---------------~~~~~~----~~~~~~L~i~~~~ 632 (813)
...+..|+.++|.|.+ .+.|.+. |.|+|++...... ...++. ...+.+|.|.+++
T Consensus 12 ~~~v~~G~~v~L~C~~-~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~ 90 (248)
T 3pv7_A 12 TQITPLNDNVTIFCNI-FYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQ 90 (248)
T ss_dssp EEEEETTSCEEECCEE-EESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCC
T ss_pred CeEEeCCCCEEEeeEE-ecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCC
Confidence 3467889999999998 5666665 9999975431100 000000 0112359999999
Q ss_pred ccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecC-CCCC-eEEEEeCC
Q psy14896 633 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG-YPVP-SYNWTRRG 710 (813)
Q Consensus 633 ~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g-~P~p-~i~W~k~g 710 (813)
.+|+|.|+|.|.|..+... ..+.|.|..+|.+... +. ..+..|+.++|.|.+.| .|.| .|+|+|+|
T Consensus 91 ~~D~G~Y~C~~~~~~~~~~---~~~~L~V~~~P~v~~~--~~-------~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g 158 (248)
T 3pv7_A 91 LEEAGEYRCEVVVTPLKAQ---GTVQLEVVASPASRLL--LD-------QVGMKENEDKYMCESSGFYPEAINITWEKQT 158 (248)
T ss_dssp GGGCEEEEEEEEETTEEEE---EEEEEEEEBCCEEEEE--CC---------------CEEEEEEEEEBSSCCEEEEEEEC
T ss_pred HHHCeEEEEEEEeCCccce---eEEEEEEecCCceEEe--cC-------CccccCCCcEEEEEEccEECCCeEEEEEECC
Confidence 9999999999999775432 3477888887765432 11 23456888899999998 8998 99999999
Q ss_pred cccCCCce----------------eeecceEEEECCCCCCCCEEEEEEEEcCCCc--eEEEEEEEEEcCCccc
Q psy14896 711 SPLPRNAY----------------FENFNRILTIPNVKVEDQGEYICRASNDRSA--LESSVTISIQAEPNFT 765 (813)
Q Consensus 711 ~~l~~~~~----------------~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~--~~~~~~l~V~~~P~~~ 765 (813)
.++..... .....+.|.|.....+|.|.|+|.|.|..+. .+.++.|.| ..|.++
T Consensus 159 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V-~~p~~~ 230 (248)
T 3pv7_A 159 QKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA-ARHSLS 230 (248)
T ss_dssp SSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC---------
T ss_pred ccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE-cCCCCC
Confidence 86643210 1112357999999999999999999999886 566778888 445554
No 304
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.76 E-value=1.4e-19 Score=175.82 Aligned_cols=170 Identities=14% Similarity=0.176 Sum_probs=114.5
Q ss_pred CCceeccCCCceEEeCCCCCCCccEEEEccCC--CCCc----------ccCCCeEEEeeC---ccEEEEeecccCCeeEE
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDY--FPNF----------VEEDKRVFVSYD---GALYFSALEQIDAGNYS 640 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~--~~~~----------~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~ 640 (813)
.+..+.+|+.++|.|.+ .+.|.+.|.|+|++ .... .....++.+..+ .+|.|.+++.+|+|.|+
T Consensus 7 ~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 7 SSASVTVGETVKITCSG-DQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp SEEEEETTSCCCEEEEE-TTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CeEEEeCCCcEEEEEec-CCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 34567889999999998 68888899999863 2210 011345655433 36999999999999999
Q ss_pred EEEEeeecCccccCceeeEEEccCCCc-cccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CC-CeEEEEeCCcccCCCc
Q psy14896 641 CNVQSKVSDTGRNGPFFPLKVFPHSNF-QQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PV-PSYNWTRRGSPLPRNA 717 (813)
Q Consensus 641 C~a~n~~g~~~~~~~~~~l~v~~~p~~-~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~-p~i~W~k~g~~l~~~~ 717 (813)
|.|.|..+..........|.|...+.. ..+.. ......+.+|+.++|.|.+.|. |+ |.|+|+|+|.++..+.
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~-----~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~ 160 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTV-----FPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGV 160 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEEC-----CCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSC
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEe-----eCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCe
Confidence 999973221111122345666432211 11110 0111234579999999999987 55 7999999999886543
Q ss_pred eee---------ecceEEEECCCCCCCCEEEEEEEEcCCCceE
Q psy14896 718 YFE---------NFNRILTIPNVKVEDQGEYICRASNDRSALE 751 (813)
Q Consensus 718 ~~~---------~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 751 (813)
... ...+.|.|.++..+|+|.|+|.|.|..+..+
T Consensus 161 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 203 (212)
T 1nfd_E 161 KTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETVE 203 (212)
T ss_dssp BCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTCC
T ss_pred ecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceEE
Confidence 210 1135699999999999999999999977643
No 305
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.76 E-value=2.9e-18 Score=168.11 Aligned_cols=185 Identities=15% Similarity=0.099 Sum_probs=124.4
Q ss_pred CceeecCCCccccccEEEEeeeccCCCC---eEEEeeccccccccccc------ccccCCCccEE-----------eeCC
Q psy14896 197 TDVVFDLSKRSILNDITLSCYAGGYPNP---SYEWFKEDYVQDRLVAN------LIDPLSDKRFT-----------LSGG 256 (813)
Q Consensus 197 ~~~~v~~g~~~~g~~v~l~C~~~g~P~p---~v~W~k~g~~l~~~~~~------~~~~~~~~~~~-----------~~~~ 256 (813)
.++.+..| ++|+|.|.+.+.|.+ .|.|+|++..+...... ........+.. ..++
T Consensus 9 ~~V~~~~G-----~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (225)
T 4fmk_A 9 PEVRGRLG-----GTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDA 83 (225)
T ss_dssp SEEEEETT-----SCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBC
T ss_pred CEEEEecC-----CCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcE
Confidence 34555555 779999999987766 48999988654211100 00001111111 2346
Q ss_pred eEEEcCCccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeecccc
Q psy14896 257 NLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFP 336 (813)
Q Consensus 257 ~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~ 336 (813)
+|.|.+. +.+|+|.|+|.|.|..+........+.+..++.+...........++...+.|.+..+.|++.+.|++++..
T Consensus 84 sL~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~ 162 (225)
T 4fmk_A 84 TLAFRGL-RVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGG 162 (225)
T ss_dssp CEEECSC-CGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCC
T ss_pred EEEEccC-CHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCcc
Confidence 7899885 899999999999998777656666666666665555555556666777788888778889999999999876
Q ss_pred ccccCCccEEEccCc------cEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEcc
Q psy14896 337 NFVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP 390 (813)
Q Consensus 337 ~~~~~~~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~ 390 (813)
+.. ........++ .|.|.++..+|+|.|+|.|.|..+.... +..+.|.|++
T Consensus 163 ~~~--~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~-~~~v~l~V~Y 219 (225)
T 4fmk_A 163 EAK--DTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPI-LLPVTLSVRY 219 (225)
T ss_dssp EEE--EEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCE-EEEEECCBTT
T ss_pred ccC--CcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEE-EEEEEEEEEE
Confidence 322 1222222333 5999999999999999999998775332 3345555554
No 306
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.75 E-value=1.2e-18 Score=168.98 Aligned_cols=169 Identities=15% Similarity=0.208 Sum_probs=115.2
Q ss_pred CCCceeccCCCceEEeCCCCCCC---ccEEEEccCCCCCcc------------cCCCeEEEeeCc---cEEEEeecccCC
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYP---GVNYYWARDYFPNFV------------EEDKRVFVSYDG---ALYFSALEQIDA 636 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p---~~~v~W~k~~~~~~~------------~~~~~~~~~~~~---~L~i~~~~~~d~ 636 (813)
+.+..+.+|+.++|.|.+ .+.| .+.|.|+|++....+ ....|+....++ +|.|.+++.+|+
T Consensus 7 p~~~~v~~G~~v~L~C~~-~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 85 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRS-STGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDE 85 (212)
T ss_dssp CSEEEECTTCCEEEEEEE-SSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CCeEeecCCCCEEEEEEe-cccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCC
Confidence 344567889999999998 5666 578999997421111 123455554332 699999999999
Q ss_pred eeEEEEEEeeecCccccCceeeEEEcc----CCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCC--eEEEEeCC
Q psy14896 637 GNYSCNVQSKVSDTGRNGPFFPLKVFP----HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP--SYNWTRRG 710 (813)
Q Consensus 637 G~Y~C~a~n~~g~~~~~~~~~~l~v~~----~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p--~i~W~k~g 710 (813)
|.|.|.|.|..+... .....|.|.. +|.+... + ....+..|+.++|.|.+.|.|++ .|+|+|||
T Consensus 86 G~Y~C~~~~~~~~~~--~~~~~l~V~~~~~~~P~v~~~--~------~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g 155 (212)
T 1q0x_L 86 AIYFCALWSNNKLVF--GGGTKLTVLGQPKSSPTVTLF--P------PSSEELSTAKATLVCTITDFYPGVVTVDWKVDG 155 (212)
T ss_dssp EEEEEEEECSSCEEE--CCCEEEEECCSCCBCCEEEEE--C------CCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred EEEEEEEecCchhhc--CCCeEEEEecCCCCCCeeEEe--C------CCHHHccCCcEEEEEEEEEEeCCCeEEEEEECC
Confidence 999999999765321 1224566643 2222110 1 11223469999999999986543 89999999
Q ss_pred cccCCCcee----e------ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEE
Q psy14896 711 SPLPRNAYF----E------NFNRILTIPNVKVEDQGEYICRASNDRSALESSV 754 (813)
Q Consensus 711 ~~l~~~~~~----~------~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~ 754 (813)
.++..+... . ...+.|.|..+..+|+|.|+|.|.|..+....++
T Consensus 156 ~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~v 209 (212)
T 1q0x_L 156 TPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKTL 209 (212)
T ss_dssp EEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEEE
T ss_pred EeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeeee
Confidence 988765321 1 1124699999999999999999999866544443
No 307
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.75 E-value=5e-18 Score=166.09 Aligned_cols=182 Identities=14% Similarity=0.161 Sum_probs=114.1
Q ss_pred CceeecCCCccccccEEEEeeeccCCC-----CeEEEeeccccccccccc-----ccccCCCccEEee-------CCeEE
Q psy14896 197 TDVVFDLSKRSILNDITLSCYAGGYPN-----PSYEWFKEDYVQDRLVAN-----LIDPLSDKRFTLS-------GGNLI 259 (813)
Q Consensus 197 ~~~~v~~g~~~~g~~v~l~C~~~g~P~-----p~v~W~k~g~~l~~~~~~-----~~~~~~~~~~~~~-------~~~l~ 259 (813)
..+.+.+| ++++|.|.+.|.|. +.|.|+|++..+...... ........+..+. +.+|.
T Consensus 9 ~~v~~~~G-----~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 83 (222)
T 3sbw_C 9 DLYVVEYG-----SNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQ 83 (222)
T ss_dssp SEEEEETT-----SCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEE
T ss_pred ccEEEEcC-----CcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEE
Confidence 44566566 77999999987773 489999987433211100 0001112333332 23688
Q ss_pred EcCCccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeec-ccccc
Q psy14896 260 INDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARD-YFPNF 338 (813)
Q Consensus 260 i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~-~~~~~ 338 (813)
|.+. +.+|+|.|+|.|.| .|.. +..+.|.|..++............+|+.++|.|.+ .|.|.|.++|+++ +..+
T Consensus 84 I~~v-~~~D~G~Y~C~~~~-~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~-~g~P~p~i~W~~~~g~~~- 158 (222)
T 3sbw_C 84 ITDV-KLQDAGVYRCMISY-GGAD-YKRITVKVNAPYNKINQRILVVDPVTSEHELTCQA-EGYPKAEVIWTSSDHQVL- 158 (222)
T ss_dssp ESSC-CGGGCEEEEEEEES-SSEE-EEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEE-EEBSCCEEEEEETTCCEE-
T ss_pred EcCc-ccccCeEEEEEEEe-CCCc-eeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEe-cCCCCCeEEEEECCCcee-
Confidence 8885 89999999999999 4544 56788888755443222222255678888999996 6699999999999 5442
Q ss_pred ccCCccE--EEccCccEEEe---eeeecCCeeeEEEEeeeccccCCCCCceeeEEccCC
Q psy14896 339 VEEDKRV--FVSYDGALYFS---ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS 392 (813)
Q Consensus 339 ~~~~~~~--~~~~~~~L~i~---~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~ 392 (813)
....+. ....++.+.+. .+..+|+|.|+|.|.|..|..... +.|.|...|
T Consensus 159 -~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~---~~l~v~~~p 213 (222)
T 3sbw_C 159 -SGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHT---AELVIPELP 213 (222)
T ss_dssp -CCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEE---EEEECCCC-
T ss_pred -cCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeE---EEEEecCCc
Confidence 222222 22234444333 567799999999999998754433 667665443
No 308
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.75 E-value=3.2e-18 Score=168.61 Aligned_cols=172 Identities=18% Similarity=0.268 Sum_probs=116.5
Q ss_pred CCCceeecCCCccccccEEEEeeeccCCC-CeEEEeecccccc--cccccc-cccCCCccEE----------e-eCCeEE
Q psy14896 195 QPTDVVFDLSKRSILNDITLSCYAGGYPN-PSYEWFKEDYVQD--RLVANL-IDPLSDKRFT----------L-SGGNLI 259 (813)
Q Consensus 195 ~p~~~~v~~g~~~~g~~v~l~C~~~g~P~-p~v~W~k~g~~l~--~~~~~~-~~~~~~~~~~----------~-~~~~l~ 259 (813)
.|.++.+.+| +++.|.|.+.+.|. +.|.|+|++.... ...... .......++. + .+++|.
T Consensus 6 ~p~~~~v~~G-----~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~ 80 (231)
T 2pet_A 6 VPPLVEVMRG-----KSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLV 80 (231)
T ss_dssp CCSEEEEETT-----CCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEE
T ss_pred CCCcEEEEcC-----CCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEE
Confidence 4566777777 67999999999885 8999999876422 000000 0000012222 3 356788
Q ss_pred EcCCccccCCeeEEEEeecCc-eeeEeeeeEEeeeeecccc---cCCCCceeecCCCe-EEEecCCCCCCcceEEEeecc
Q psy14896 260 INDPRQVEDRGSYHCKASNKF-GSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGK-AMFCDPPTNYPGVNYYWARDY 334 (813)
Q Consensus 260 i~~~~~~~d~G~Y~C~a~n~~-g~~~s~~~~l~v~~~~~~~---~~~~~~~~~~~~~~-~l~C~~~~~~p~~~v~W~k~~ 334 (813)
|.+. +.+|+|.|+|.|.|.. +.. +..+.|.|..+|... .......+.+|+.. +|.|.+..+.|.+.++|+|++
T Consensus 81 i~~v-~~~D~G~Y~C~~~~~~~~~~-~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~ 158 (231)
T 2pet_A 81 LAEA-QVGDERDYVCVVRAGAAGTA-EATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNG 158 (231)
T ss_dssp ESSC-CGGGCEEEEEEEECGGGCEE-EEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETT
T ss_pred Eccc-CcccCceEEEEEEecCCCce-EEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECC
Confidence 8875 8999999999999987 544 778888887765432 22333445577777 999996578899999999999
Q ss_pred ccccccC--CccEEEcc------C------ccEEEeeeeecCCeeeEEEEeee
Q psy14896 335 FPNFVEE--DKRVFVSY------D------GALYFSALEQIDAGNYSCNVQSK 373 (813)
Q Consensus 335 ~~~~~~~--~~~~~~~~------~------~~L~i~~v~~~D~G~Y~C~a~n~ 373 (813)
.++.... ..++.+.. + +.|.|.....+|+|.|+|.|.|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 159 QRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp EECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred ccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 8754333 12333222 1 45888766666799999999995
No 309
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.75 E-value=2.6e-18 Score=167.63 Aligned_cols=175 Identities=15% Similarity=0.240 Sum_probs=116.0
Q ss_pred CCceeccCCCceEEeCCCCCCC--ccEEEEccCC--CCCcc---------------cCCCeEEEee-----CccEEEEee
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYP--GVNYYWARDY--FPNFV---------------EEDKRVFVSY-----DGALYFSAL 631 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~--~~~~~---------------~~~~~~~~~~-----~~~L~i~~~ 631 (813)
.+..+.+|+.++|.|.+ .+.| .+.|.|+|++ ..... ....|+.+.. +++|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 8 GPELKKPGETVKISCKA-SGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCEEECTTCCEEEEEEE-ESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCeEecCCCcEEEEEEE-eCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 34567889999999999 5654 6899999973 32110 1134666653 247999999
Q ss_pred cccCCeeEEEEEEeeecCcc-ccCceeeEEEccCC-CccccccCCCCCCCCCcCCCCCCeEEEEEEecC-CCCC-eEEEE
Q psy14896 632 EQIDAGNYSCNVQSKVSDTG-RNGPFFPLKVFPHS-NFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG-YPVP-SYNWT 707 (813)
Q Consensus 632 ~~~d~G~Y~C~a~n~~g~~~-~~~~~~~l~v~~~p-~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g-~P~p-~i~W~ 707 (813)
+.+|+|.|+|.|.|..+... .....+.|.|...+ ....+.. ......+.+|+.++|.|.+.| .|.| .|+|+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~-----~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 161 (219)
T 1c1e_H 87 KNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYP-----LAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN 161 (219)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEE-----ECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEG
T ss_pred CcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEE-----ecCccccccCCeEEEEEEcccccCCCeEEEEE
Confidence 99999999999999763210 11123567776632 1111110 011134678999999999998 8999 99999
Q ss_pred eCCcccCCCc---eee----ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEE
Q psy14896 708 RRGSPLPRNA---YFE----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 757 (813)
Q Consensus 708 k~g~~l~~~~---~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 757 (813)
|+|..+.... ... ...+.|.|... ..|.|.|+|.|.|..|.......|.
T Consensus 162 ~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~-~~d~g~Y~C~a~n~~~~~~~~~~i~ 217 (219)
T 1c1e_H 162 SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-PRPSETVTCNVAHPASSTKVDKKIV 217 (219)
T ss_dssp GGTBCTTEEECCCEESSSCEEEEEEEEEESS-STTTSCCEEEEEEGGGTEEEEEECC
T ss_pred eCCcccceEecCCcccCCeEEEEEEEEEecc-cCCCCEEEEEEEeCCCCccEEEecC
Confidence 9998753211 111 11347999444 4466999999999988766555543
No 310
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.75 E-value=4.3e-17 Score=162.62 Aligned_cols=176 Identities=18% Similarity=0.273 Sum_probs=118.1
Q ss_pred CceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccc--ccccc--ccccccCCCccEEee----CCeEEEc
Q psy14896 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV--QDRLV--ANLIDPLSDKRFTLS----GGNLIIN 261 (813)
Q Consensus 190 P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~--l~~~~--~~~~~~~~~~~~~~~----~~~l~i~ 261 (813)
+.++..|..+.+.+| ++|+|.|.+.+.|.+.+.|||+... ..... ..........++... +.+|.|.
T Consensus 5 ~~v~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 79 (250)
T 3esu_F 5 IVLIQSTSSLSASLG-----DRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTIS 79 (250)
T ss_dssp CCEECSCSEEEECTT-----CCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred eeEEecCCEEEeeCC-----CcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEc
Confidence 345556777877777 7799999999999999999997421 10000 000011223344432 2268888
Q ss_pred CCccccCCeeEEEEeecCceeeEeeeeEEeeeee-------------------cccccCCCCceeecCCCeEEEecCCCC
Q psy14896 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFI-------------------GEFNLKRAPEIGNQNWGKAMFCDPPTN 322 (813)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~-------------------~~~~~~~~~~~~~~~~~~~l~C~~~~~ 322 (813)
+. +.+|+|.|+|.|.|..+...+....|.|... +.+...+....+.+|+.++|.|.+ .+
T Consensus 80 ~v-~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~~ 157 (250)
T 3esu_F 80 NL-EQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKD-SG 157 (250)
T ss_dssp SC-CGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEEC-CS
T ss_pred cC-ChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEe-cC
Confidence 85 8999999999999987765555667777653 122233455678899999999996 45
Q ss_pred CC--cceEEEeec--cccccc---------------cCCccEEEccCc-----cEEEeeeeecCCeeeEEEEee
Q psy14896 323 YP--GVNYYWARD--YFPNFV---------------EEDKRVFVSYDG-----ALYFSALEQIDAGNYSCNVQS 372 (813)
Q Consensus 323 ~p--~~~v~W~k~--~~~~~~---------------~~~~~~~~~~~~-----~L~i~~v~~~D~G~Y~C~a~n 372 (813)
.| .+.+.|+|+ +..+.. ....|+.+..++ +|.|.+++.+|+|.|+|.|.+
T Consensus 158 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 158 YAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp TTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 45 789999998 444211 112455554332 699999999999999999997
No 311
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.75 E-value=1.9e-17 Score=167.71 Aligned_cols=196 Identities=16% Similarity=0.188 Sum_probs=126.4
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccc--cccccc--cccccCCCccEEee-C---CeEEE
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV--QDRLVA--NLIDPLSDKRFTLS-G---GNLII 260 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~--l~~~~~--~~~~~~~~~~~~~~-~---~~l~i 260 (813)
.+.|+..|.++.+.+| ++++|.|.+.+.|.+.|.|||++.. +..... .........++... + .+|.|
T Consensus 12 ~~~v~~~p~~~~v~~G-----~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 86 (276)
T 3auv_A 12 DIQMTQSPSSLSASVG-----DRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTI 86 (276)
T ss_dssp CCCEEEECSEEECCTT-----CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ceeEEeCCCeEEEcCC-----CCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEE
Confidence 3567777888888777 6799999999999999999997531 100000 00001123455543 2 26888
Q ss_pred cCCccccCCeeEEEEeecCceeeEeeeeEEeeeeec-------------cccc-CCCCceeecCCCeEEEecCCCCCC--
Q psy14896 261 NDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG-------------EFNL-KRAPEIGNQNWGKAMFCDPPTNYP-- 324 (813)
Q Consensus 261 ~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~-------------~~~~-~~~~~~~~~~~~~~l~C~~~~~~p-- 324 (813)
.+. +.+|+|.|+|.|.|..+...+..+.|.|...+ .+.+ .+....+.+|+.++|.|.+ .+.|
T Consensus 87 ~~v-~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~-~g~~~~ 164 (276)
T 3auv_A 87 SSL-QPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAA-SGFTIS 164 (276)
T ss_dssp SSC-CGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEE-ESSCGG
T ss_pred ccC-ChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEe-cCccCC
Confidence 885 89999999999999866543445667776543 2222 2345677889999999996 4444
Q ss_pred cceEEEeecc--cccc---------------ccCCccEEEccC-----ccEEEeeeeecCCeeeEEEEeeecc--ccCCC
Q psy14896 325 GVNYYWARDY--FPNF---------------VEEDKRVFVSYD-----GALYFSALEQIDAGNYSCNVQSKVS--DTGRN 380 (813)
Q Consensus 325 ~~~v~W~k~~--~~~~---------------~~~~~~~~~~~~-----~~L~i~~v~~~D~G~Y~C~a~n~~g--~~~~~ 380 (813)
.+.+.|+|++ .... .....|+.+..+ .+|.|.+++.+|+|.|+|.|.|..+ .....
T Consensus 165 ~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~f 244 (276)
T 3auv_A 165 DYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYW 244 (276)
T ss_dssp GSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCB
T ss_pred CCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEE
Confidence 5899999974 2210 012346655543 2799999999999999999999742 11122
Q ss_pred CCceeeEEccC
Q psy14896 381 GPFFPLKVFPH 391 (813)
Q Consensus 381 s~~~~l~v~~~ 391 (813)
.....|.|...
T Consensus 245 g~gt~l~V~~~ 255 (276)
T 3auv_A 245 GQGTLVTVSSA 255 (276)
T ss_dssp CCCEEEEEC--
T ss_pred CCCEEEEEccc
Confidence 33467777544
No 312
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.75 E-value=8.1e-18 Score=167.60 Aligned_cols=182 Identities=15% Similarity=0.150 Sum_probs=119.1
Q ss_pred CCceeccCCCceEEeCCCCCCC--ccEEEEccCCC--CCc---------------ccCCCeEEEeeC-----ccEEEEee
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYP--GVNYYWARDYF--PNF---------------VEEDKRVFVSYD-----GALYFSAL 631 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~~--~~~---------------~~~~~~~~~~~~-----~~L~i~~~ 631 (813)
.+..+.+|+.++|.|.+ .+.| .+.|.|+|++. ... .....|+.+..+ .+|+|.++
T Consensus 10 ~~~~v~~G~~v~L~C~~-~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAA-SGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSL 88 (247)
T ss_dssp CCEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCEEEecCCcEEEEEEe-ccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcC
Confidence 34667899999999998 6766 67899999532 100 012346666542 35999999
Q ss_pred cccCCeeEEEEEEeeecCccccCceeeEEEccCCCccc------cccCC-CCCCCCCcCCCCCCeEEEEEEecCCCCCeE
Q psy14896 632 EQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQ------LKFPN-NFPKTFPEAPKAGDKVRLECVAFGYPVPSY 704 (813)
Q Consensus 632 ~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~------~~~p~-~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i 704 (813)
+.+|+|.|+|.|.|..+.. .......|.|..++.... ...+. .........+.+|++++|.|.+.|.|.|.|
T Consensus 89 ~~~D~G~Y~C~~~n~~~~~-~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v 167 (247)
T 2ghw_B 89 RAEDTAVYYCARDRSYYLD-YWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNL 167 (247)
T ss_dssp CGGGCEEEEEEEEETTEEE-EECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCE
T ss_pred CHHHCEEEEEeeeccCCcc-ccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceE
Confidence 9999999999999972211 111235677776532000 00000 001122245789999999999999999999
Q ss_pred EEEe--CCcccC------------CCcee----eecceEEEECCCCCCCCEEEEEEEEcCCCce-EEEEEEEEE
Q psy14896 705 NWTR--RGSPLP------------RNAYF----ENFNRILTIPNVKVEDQGEYICRASNDRSAL-ESSVTISIQ 759 (813)
Q Consensus 705 ~W~k--~g~~l~------------~~~~~----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~-~~~~~l~V~ 759 (813)
+|+| +|..+. ...++ .....+|+|.+++.+|+|.|+|.|.|..+.. .....|.|.
T Consensus 168 ~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 168 AWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 9999 666541 01122 1224579999999999999999999864332 234466665
No 313
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.75 E-value=4.5e-18 Score=170.22 Aligned_cols=221 Identities=13% Similarity=0.108 Sum_probs=110.6
Q ss_pred eeCCCceeecCCCccccccEEEEeeeccCCCCe-EEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccCCee
Q psy14896 193 IKQPTDVVFDLSKRSILNDITLSCYAGGYPNPS-YEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271 (813)
Q Consensus 193 ~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~-v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~ 271 (813)
...|.+..|.+| ++++|+|.+. .+.|. +.|.-.-.. ..+ ...+.. ...+.|.+. + +.|.
T Consensus 3 ~v~P~~~~V~~G-----~sv~l~Cs~~-c~~p~~~~~~t~l~~------~~~-~~~g~~----~~~~~l~~v-~--~~~~ 62 (291)
T 1mq8_A 3 SVSPSKVILPRG-----GSVLVTCSTS-CDQPKLLGIETPLPK------KEL-LLPGNN----RKVYELSNV-Q--EDSQ 62 (291)
T ss_dssp EEECSEEEECTT-----CEEEEEEEEC-CSSCSEEEEECSSCC------CCC-CCSCSS----EEEEEEESC-C--SCCC
T ss_pred EEeCCccEEcCC-----CeEEEEEeCC-CCCCccceEEecCCC------ccc-ccCCCc----eEEEEEEec-c--cCCe
Confidence 345677778777 7799999996 46665 888532110 000 011110 013555553 3 3357
Q ss_pred EEEEeecCceeeEeeeeEEeeeeecc-cccCCCCceeecCCCeEEEecCCCCCCcc--eEEEeeccccccccCCccEEEc
Q psy14896 272 YHCKASNKFGSIISESVQLAFGFIGE-FNLKRAPEIGNQNWGKAMFCDPPTNYPGV--NYYWARDYFPNFVEEDKRVFVS 348 (813)
Q Consensus 272 Y~C~a~n~~g~~~s~~~~l~v~~~~~-~~~~~~~~~~~~~~~~~l~C~~~~~~p~~--~v~W~k~~~~~~~~~~~~~~~~ 348 (813)
|+|.+. ..|...+..+.|.|..+|. +.+...+..+.+|+..+|.|.+.++.|.. +|+|+|+++++.... .....
T Consensus 63 y~C~~~-~~~~~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~--~~~~~ 139 (291)
T 1mq8_A 63 PMCYSN-CPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREP--AVGEP 139 (291)
T ss_dssp CEEEEE-CSSCEEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEE--CCBTT
T ss_pred EEEEEE-cCCccEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeeccc--CCCCC
Confidence 999996 4445667888999987766 44555566789999999999998888875 689999998753222 10001
Q ss_pred cCccEEEeeeeecCCeeeEEEEeeeccccC-----CCCCceeeEEccCCcc-cccccCCCCCCCCCcCCCCCCcEEEEEE
Q psy14896 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTG-----RNGPFFPLKVFPHSNF-QQLKFPNNFPKTFPEAPKAGDKVRLECV 422 (813)
Q Consensus 349 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~-----~~s~~~~l~v~~~~~~-~~~~~~~~~~~~~~~~v~~g~~~~l~C~ 422 (813)
...+|.+.....+|.+.|+|+|.|..+..+ ..+....|.|++.|.. ..+.. +..+.+|+.++|.|.
T Consensus 140 ~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~--------p~~l~eG~~v~l~C~ 211 (291)
T 1mq8_A 140 AEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS--------PRVLEVDTQGTVVCS 211 (291)
T ss_dssp EEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC-----------------------------------
T ss_pred ceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecC--------CcCccCCCeEEEEEE
Confidence 122466555556666799999999866322 2456678888877542 11111 235789999999999
Q ss_pred EeecCCC---eeeEeecCCcCCCCc
Q psy14896 423 AFGYPVP---SYNWTRRGSPLPRNA 444 (813)
Q Consensus 423 ~~g~p~p---~i~W~~~~~~l~~~~ 444 (813)
+.|+|++ .|.|+++|+.+....
T Consensus 212 ~~g~~P~~~~~v~w~~~g~~l~~~~ 236 (291)
T 1mq8_A 212 LDGLFPVSEAQVHLALGDQRLNPTV 236 (291)
T ss_dssp -------------------------
T ss_pred cCCCCCCcccEEEEEECCEecCcee
Confidence 9998554 699999999997643
No 314
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.75 E-value=9.1e-19 Score=170.84 Aligned_cols=172 Identities=15% Similarity=0.216 Sum_probs=114.6
Q ss_pred CceeccCCCceEEeCCCCCC-CccEEEEccCC---CCC-c------------ccCCCeEEEee---CccEEEEeecccCC
Q psy14896 577 PEIGNQNWGKAMFCDPPTNY-PGVNYYWARDY---FPN-F------------VEEDKRVFVSY---DGALYFSALEQIDA 636 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~-p~~~v~W~k~~---~~~-~------------~~~~~~~~~~~---~~~L~i~~~~~~d~ 636 (813)
...+.+|+.++|.|.+ .+. |.+.|.|+|.. .+. . .....|+.+.. +++|.|.+++.+|+
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (218)
T 3s96_B 9 SASFSLGASAKLTCTL-NSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDE 87 (218)
T ss_dssp EEEEETTSCEEEEEEE-CGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred cEEECCCCcEEEEEEC-CCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccC
Confidence 4567889999999999 677 88999999942 110 0 00113454432 34599999999999
Q ss_pred eeEEEEEEeeecCc--cccCceeeEEEccCCCc-cccccCCCCCCCCCcCCCCCCeEEEEEEecC-CCCC-eEEEEeCCc
Q psy14896 637 GNYSCNVQSKVSDT--GRNGPFFPLKVFPHSNF-QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG-YPVP-SYNWTRRGS 711 (813)
Q Consensus 637 G~Y~C~a~n~~g~~--~~~~~~~~l~v~~~p~~-~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g-~P~p-~i~W~k~g~ 711 (813)
|.|.|.|.|..|.. ......+.|.|...+.. ..+.+ ......+..|+.++|.|.+.| .|+| .|+|+|||.
T Consensus 88 G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~-----~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~ 162 (218)
T 3s96_B 88 AIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTV-----FPPSSEELKENKATLVCLISNFSPSGVTVAWKANGT 162 (218)
T ss_dssp EEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEE-----ECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred EEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEe-----eCCCcccccCCcEEEEEEECcccCCCeEEEEEECCE
Confidence 99999999988621 11222356777743311 11111 011123456799999999998 5777 899999999
Q ss_pred ccCCCcee---------eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEE
Q psy14896 712 PLPRNAYF---------ENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 754 (813)
Q Consensus 712 ~l~~~~~~---------~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~ 754 (813)
++..+... ....+.|.|.....+|+|.|+|.|.|..|....++
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 163 PITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp EC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred ECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 88653211 01124588999989999999999999987666554
No 315
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.75 E-value=4.7e-18 Score=165.05 Aligned_cols=180 Identities=18% Similarity=0.261 Sum_probs=119.3
Q ss_pred CceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccc--ccccc--ccccccCCCccEEee----CCeEEEc
Q psy14896 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV--QDRLV--ANLIDPLSDKRFTLS----GGNLIIN 261 (813)
Q Consensus 190 P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~--l~~~~--~~~~~~~~~~~~~~~----~~~l~i~ 261 (813)
|.++..|..+.+.+| ++++|.|.+.+.|.+.|.|||.+.. ..... ..........++... +.+|.|.
T Consensus 2 ~~v~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 76 (213)
T 3r06_A 2 IQMTQSPSSLPASLG-----DRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTIS 76 (213)
T ss_dssp CCEEEECSEEEECTT-----CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred CeeEeCCCEEEecCC-----CcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEEC
Confidence 456666788888777 6799999999989999999995421 10000 000011123455433 2368888
Q ss_pred CCccccCCeeEEEEeecCceeeEeeeeEEee---eeecccccCCCCceeecCCCeEEEecCCCCCC-cceEEEeeccccc
Q psy14896 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAF---GFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP-GVNYYWARDYFPN 337 (813)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v---~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p-~~~v~W~k~~~~~ 337 (813)
+. +.+|+|.|+|.|.|..+......+.|.| ..+|.+.+.........++.++|.|.+..+.| .+.++|+|||.++
T Consensus 77 ~v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l 155 (213)
T 3r06_A 77 SL-ESEDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEK 155 (213)
T ss_dssp SC-CGGGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred CC-CcccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCccc
Confidence 85 8999999999999987655556677777 33444444444555556777999999754444 4699999999875
Q ss_pred ccc--CCccEEEccCc------cEEEeeeeecCCeeeEEEEeeecc
Q psy14896 338 FVE--EDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 338 ~~~--~~~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g 375 (813)
... .........++ .|.|.....+|+|.|+|.|.|...
T Consensus 156 ~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~ 201 (213)
T 3r06_A 156 RDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTS 201 (213)
T ss_dssp CTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTC
T ss_pred CCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEeccc
Confidence 321 11111122233 577888888899999999999754
No 316
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.74 E-value=5.5e-18 Score=164.95 Aligned_cols=170 Identities=14% Similarity=0.191 Sum_probs=113.3
Q ss_pred CCceeccCCCceEEeCCCCCCC-ccEEEEccCCC--CCc----------ccCCCeEEEeeCc---cEEEEeecccCCeeE
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYP-GVNYYWARDYF--PNF----------VEEDKRVFVSYDG---ALYFSALEQIDAGNY 639 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p-~~~v~W~k~~~--~~~----------~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y 639 (813)
....+.+|+.++|.|.+..+.+ .+.|.|+|++. ... .....|+.+..++ +|.|.+++.+|+|.|
T Consensus 8 ~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 87 (216)
T 2xzc_L 8 PSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADY 87 (216)
T ss_dssp SEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEE
Confidence 4456788999999999634443 57999999642 110 1113466555333 699999999999999
Q ss_pred EEEEEeeecCccccCceeeEEEccCCCcccccc-CCCCCCCCCcCCCCCCeEEEEEEecC-CCCC-eEEEEeCCcccCCC
Q psy14896 640 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKF-PNNFPKTFPEAPKAGDKVRLECVAFG-YPVP-SYNWTRRGSPLPRN 716 (813)
Q Consensus 640 ~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~-p~~~~~~~~~~~~~G~~v~l~C~~~g-~P~p-~i~W~k~g~~l~~~ 716 (813)
+|.|.|..+.. .......|.|...+....+.. +. ...+..|+.++|.|.+.| .|+| .|+|+|+|.++..+
T Consensus 88 ~C~~~~~~~~~-~~~~~~~l~V~~~~~~P~v~~~~~------~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~ 160 (216)
T 2xzc_L 88 YCGTWDSSLNP-VFGGGTKLEIKRTVAAPSVFIFPP------SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN 160 (216)
T ss_dssp EEEEECTTSCE-EEBCCEEEEECCCCBCCEEEEECC------CHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSS
T ss_pred EEEEEeCCCcc-eECCCEEEEEcCCCCCCceEEeCC------ChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCC
Confidence 99999976511 111124566653321111111 10 012236899999999998 4554 89999999998766
Q ss_pred -ce-e---e-e-----cceEEEECCCCCCCCEEEEEEEEcCCCceEE
Q psy14896 717 -AY-F---E-N-----FNRILTIPNVKVEDQGEYICRASNDRSALES 752 (813)
Q Consensus 717 -~~-~---~-~-----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 752 (813)
.. . . . ..+.|.|..+..+|+|.|+|.|.|.......
T Consensus 161 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (216)
T 2xzc_L 161 SQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPV 207 (216)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCE
T ss_pred eeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCce
Confidence 11 1 1 1 1237999999999999999999998765443
No 317
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.74 E-value=2.4e-18 Score=170.28 Aligned_cols=171 Identities=12% Similarity=0.122 Sum_probs=115.6
Q ss_pred CCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCc------------ccCCCeEEEe---eCccEEEEeecccCCeeE
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNF------------VEEDKRVFVS---YDGALYFSALEQIDAGNY 639 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~------------~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y 639 (813)
+....+.+|++++|.|.+ .+.|.+.|.|+|++.... .....++... .+++|.|.+++.+|+|.|
T Consensus 31 p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 109 (237)
T 3sob_L 31 PSSLSASVGDRVTITCRA-SQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATY 109 (237)
T ss_dssp CSEEEEETTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCeEEEeCCCcEEEEEec-CCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEE
Confidence 344567889999999999 677899999999531100 1123455544 234699999999999999
Q ss_pred EEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-C-CCeEEEEeCCcccCCCc
Q psy14896 640 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-P-VPSYNWTRRGSPLPRNA 717 (813)
Q Consensus 640 ~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P-~p~i~W~k~g~~l~~~~ 717 (813)
+|.|.|..+.... ....|.|...+....+.. ......+.+|+.++|.|.+.|. | .|.|+|+|+|..+..+.
T Consensus 110 ~C~~~~~~~~~~~--~~~~l~V~~~~~~p~v~~-----~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~ 182 (237)
T 3sob_L 110 YCQQSYTTPPTFG--QGTKVEIKRTVAAPSVFI-----FPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNS 182 (237)
T ss_dssp EEEECSSSSCEEC--CCEEEEEECCCBCCEEEE-----ECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSE
T ss_pred EEeeccCCceEEc--CcEEEEEecCCCCCceEE-----eCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCce
Confidence 9999887653222 224566643222222111 0111234468999999999984 4 48999999999887542
Q ss_pred ----ee-------eecceEEEECCCCCCCCEEEEEEEEcCCCceEEE
Q psy14896 718 ----YF-------ENFNRILTIPNVKVEDQGEYICRASNDRSALESS 753 (813)
Q Consensus 718 ----~~-------~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 753 (813)
.. ....+.|.|..+..+|+|.|+|+|.|........
T Consensus 183 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 229 (237)
T 3sob_L 183 QESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVT 229 (237)
T ss_dssp EEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEE
T ss_pred eecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCcee
Confidence 00 1113569999999999999999999987654433
No 318
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.74 E-value=1.1e-17 Score=169.39 Aligned_cols=184 Identities=15% Similarity=0.167 Sum_probs=117.2
Q ss_pred CCCceeccCCCceEEeCCCCCCCccEEEEccCCCCC----cc--------cCCCeEEEeeCc---cEEEEeecccCCeeE
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPN----FV--------EEDKRVFVSYDG---ALYFSALEQIDAGNY 639 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~----~~--------~~~~~~~~~~~~---~L~i~~~~~~d~G~Y 639 (813)
+....+.+|+.++|.|.+ .+.|.+.|.|+|++... .. ....|+.+..++ +|+|.+++.+|+|.|
T Consensus 19 p~~~~v~~G~~v~L~C~~-~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 97 (276)
T 3auv_A 19 PSSLSASVGDRVTITCRA-SQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATY 97 (276)
T ss_dssp CSEEECCTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCeEEEcCCCCEEEEeEc-CCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEE
Confidence 344567889999999999 67888999999965311 00 123466655443 699999999999999
Q ss_pred EEEEEeeecCccccCceeeEEEccCCCccc-----cccCCC-CCCCCCcCCCCCCeEEEEEEecCCC--CCeEEEEeCC-
Q psy14896 640 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQ-----LKFPNN-FPKTFPEAPKAGDKVRLECVAFGYP--VPSYNWTRRG- 710 (813)
Q Consensus 640 ~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~-----~~~p~~-~~~~~~~~~~~G~~v~l~C~~~g~P--~p~i~W~k~g- 710 (813)
.|.|.|..+... .....|.|..+|.... ...|.. ...+....+.+|++++|.|.+.|.| .|.|.|+|++
T Consensus 98 ~C~~~n~~~~~~--~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~ 175 (276)
T 3auv_A 98 YCQQHYTTPPTF--GCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAP 175 (276)
T ss_dssp EEEECSSSSCCC--CCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECT
T ss_pred EEEEecCCcccc--cCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEcCC
Confidence 999999765322 1224677766542000 000000 0011235688999999999999887 4899999973
Q ss_pred -cccC-----------------CCceee------ecceEEEECCCCCCCCEEEEEEEEcCC---Cc--eEEEEEEEEEcC
Q psy14896 711 -SPLP-----------------RNAYFE------NFNRILTIPNVKVEDQGEYICRASNDR---SA--LESSVTISIQAE 761 (813)
Q Consensus 711 -~~l~-----------------~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~a~N~~---G~--~~~~~~l~V~~~ 761 (813)
..+. ...++. ....+|+|.+++.+|+|.|.|.|.|.. +. -.....|.|...
T Consensus 176 g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~l~V~~~ 255 (276)
T 3auv_A 176 GKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSA 255 (276)
T ss_dssp TCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCBCCCEEEEEC--
T ss_pred CCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEECCCEEEEEccc
Confidence 2210 011221 123489999999999999999999983 22 123456777543
No 319
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.74 E-value=5.8e-17 Score=157.43 Aligned_cols=170 Identities=17% Similarity=0.272 Sum_probs=115.1
Q ss_pred eCCCceeecCCCccccccEEEEeeeccC-------CCCeEEEeecccccccc--cc-----cccccCCCccEEee-----
Q psy14896 194 KQPTDVVFDLSKRSILNDITLSCYAGGY-------PNPSYEWFKEDYVQDRL--VA-----NLIDPLSDKRFTLS----- 254 (813)
Q Consensus 194 ~~p~~~~v~~g~~~~g~~v~l~C~~~g~-------P~p~v~W~k~g~~l~~~--~~-----~~~~~~~~~~~~~~----- 254 (813)
..|..+.+.+| ++|+|.|.+.+. |.+.|.|||++...... .. .........|+.+.
T Consensus 5 ~~p~~v~v~~G-----~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 79 (214)
T 2zg1_A 5 QVQKSVTVQEG-----LCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQK 79 (214)
T ss_dssp ECCSEEEEETT-----CCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGG
T ss_pred eCCcEEEEecC-----ccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCC
Confidence 34667777777 779999999753 57899999997531100 00 00112233455543
Q ss_pred -CCeEEEcCCccccCCeeEEEEeecCceeeE---eeeeEEeeeeecc-cccCCCCceeecCCCeEEEecCCCC---CCcc
Q psy14896 255 -GGNLIINDPRQVEDRGSYHCKASNKFGSII---SESVQLAFGFIGE-FNLKRAPEIGNQNWGKAMFCDPPTN---YPGV 326 (813)
Q Consensus 255 -~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~---s~~~~l~v~~~~~-~~~~~~~~~~~~~~~~~l~C~~~~~---~p~~ 326 (813)
+.+|.|.+. +.+|+|.|+|.|.|..+... +..+.|.|..++. +.+.. +..+.+|+.++|.|.+..+ .|.|
T Consensus 80 ~~~sL~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~~~~~G~~v~L~C~~~~~~~~~p~p 157 (214)
T 2zg1_A 80 KNCSLSIGDA-RMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-LEPLESGRPTRLSCSLPGSCEAGPPL 157 (214)
T ss_dssp TBCCEEECSC-CGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---CCCCTTCCEEEEEECTTCCSCSSCC
T ss_pred CeEEEEEccC-CHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-CccccCCCeEEEEEEeccCCCCCCCc
Confidence 346888885 89999999999998764332 2467788776442 22222 3346788999999997543 5889
Q ss_pred eEEEeeccccccccCCccEEEccCccEEEeeeeecCCeeeEEEEeeecc
Q psy14896 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 327 ~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 375 (813)
.++|+|++..+.. .+ ....+.|.|..+..+|+|.|+|.|.|..+
T Consensus 158 ~v~W~~~~~~~~~---~~--~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~ 201 (214)
T 2zg1_A 158 TFSWTGNALSPLD---PE--TTRSSELTLTPRPEDHGTNLTCQMKRQGA 201 (214)
T ss_dssp EEEEESSTTSSSC---SS--CCCSSEEEECCCTTCCSCEEEEEEECC--
T ss_pred eEEEeCCCCccCC---CC--ceeEEEEEEecccHHcCcEEEEEEEeCCC
Confidence 9999999976321 11 14556899999999999999999999754
No 320
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.74 E-value=3.9e-18 Score=165.64 Aligned_cols=168 Identities=14% Similarity=0.141 Sum_probs=113.7
Q ss_pred CCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCc------------ccCCCeEEEeeC---ccEEEEeecccCCeeE
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNF------------VEEDKRVFVSYD---GALYFSALEQIDAGNY 639 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~------------~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y 639 (813)
+....+.+|+.++|.|.+ .+.|.+.|.|+|.+.... .....|+.+... .+|.|.+++.+|+|.|
T Consensus 8 p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (213)
T 3r06_A 8 PSSLPASLGDRVTINCQA-SQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSY 86 (213)
T ss_dssp CSEEEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEE
T ss_pred CCEEEecCCCcEEEEEEe-CCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEE
Confidence 344567889999999999 677899999998431100 012345555432 3699999999999999
Q ss_pred EEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCC--CeEEEEeCCcccCCCc
Q psy14896 640 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV--PSYNWTRRGSPLPRNA 717 (813)
Q Consensus 640 ~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~--p~i~W~k~g~~l~~~~ 717 (813)
+|.|.|..+.... ....|.|...+....+.+ ......+..|+.++|.|.+.|.|+ +.|+|+|+|..+..+.
T Consensus 87 ~C~~~~~~~~~~~--~~~~l~V~~~~~~p~v~~-----~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 159 (213)
T 3r06_A 87 YCQQYYNYPWTFG--PGTKLEIKRADAKPTVSI-----FPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGV 159 (213)
T ss_dssp EEEECSSSSCEEC--CCEEEEECCCCBCCEEEE-----ECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTE
T ss_pred EEecccCCceEEc--CCceEEEeccCCCceeee-----eCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCce
Confidence 9999987643222 224577732222111111 011133457889999999998765 3899999999887642
Q ss_pred -e---e-e------ecceEEEECCCCCCCCEEEEEEEEcCCCce
Q psy14896 718 -Y---F-E------NFNRILTIPNVKVEDQGEYICRASNDRSAL 750 (813)
Q Consensus 718 -~---~-~------~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 750 (813)
. . . ...+.|.|.....+|+|.|+|.|.|.....
T Consensus 160 ~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~ 203 (213)
T 3r06_A 160 LQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTA 203 (213)
T ss_dssp EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred EeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCc
Confidence 1 0 1 112468899999999999999999986443
No 321
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.74 E-value=3.8e-17 Score=161.70 Aligned_cols=175 Identities=14% Similarity=0.160 Sum_probs=113.8
Q ss_pred eeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecc--cccccccc-----cccccCCCccEEee-----CCeEE
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED--YVQDRLVA-----NLIDPLSDKRFTLS-----GGNLI 259 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g--~~l~~~~~-----~~~~~~~~~~~~~~-----~~~l~ 259 (813)
++..|.++.+.+| ++|+|.|. .+.|.+.|.|||+. ..+..... .........++.+. ..+|.
T Consensus 3 v~q~p~~~~v~~G-----~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~ 76 (238)
T 2p1y_A 3 VTQSPRNKVAVTG-----GKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLI 76 (238)
T ss_dssp EEEECSEEEEETT-----CCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEE
T ss_pred ceECccceEEeCC-----CEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEE
Confidence 4556777888777 67999999 67899999999973 21110000 00001112344432 34688
Q ss_pred EcCCccccCCeeEEEEeecCcee----eEeeeeEEeeeeecc------------cccCCCCceeecCCCeEEEecCCCCC
Q psy14896 260 INDPRQVEDRGSYHCKASNKFGS----IISESVQLAFGFIGE------------FNLKRAPEIGNQNWGKAMFCDPPTNY 323 (813)
Q Consensus 260 i~~~~~~~d~G~Y~C~a~n~~g~----~~s~~~~l~v~~~~~------------~~~~~~~~~~~~~~~~~l~C~~~~~~ 323 (813)
|.+. +.+|+|.|+|.|.|..|. .....+.|.|...+. +...+....+.+|+.++|.|.+ .+.
T Consensus 77 I~~v-~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~-~~~ 154 (238)
T 2p1y_A 77 LELA-TPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSY-ENS 154 (238)
T ss_dssp ESSC-CGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEEC-CCT
T ss_pred EecC-CcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEE-ecC
Confidence 8885 899999999999998652 112345666654432 2222445568899999999996 677
Q ss_pred CcceEEEeeccc--ccc----------ccCCccEEEcc-----CccEEEeeeeecCCeeeEEEEeeec
Q psy14896 324 PGVNYYWARDYF--PNF----------VEEDKRVFVSY-----DGALYFSALEQIDAGNYSCNVQSKV 374 (813)
Q Consensus 324 p~~~v~W~k~~~--~~~----------~~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~a~n~~ 374 (813)
|.+.+.|+|++. ... .....|+.+.. .++|.|.+++.+|+|.|+|.|.|..
T Consensus 155 p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 155 AFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp TCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred CCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 889999999742 110 01234554431 2479999999999999999999974
No 322
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.74 E-value=4.2e-18 Score=166.54 Aligned_cols=174 Identities=16% Similarity=0.206 Sum_probs=117.7
Q ss_pred CceeccCCCceEEeCCCCCCC--ccEEEEccCCC--CCc-c----------------cCCCeEEEeeC-----ccEEEEe
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYP--GVNYYWARDYF--PNF-V----------------EEDKRVFVSYD-----GALYFSA 630 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~~--~~~-~----------------~~~~~~~~~~~-----~~L~i~~ 630 (813)
+..+.+|+.++|.|.+ .+.| .+.|.|+|+.. ... + ....|+.+..+ .+|+|.+
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (222)
T 1q9r_B 9 GGLVQSGGSLRLSCAT-SGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNT 87 (222)
T ss_dssp CCEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred ceeEcCCCEEEEEEEe-cCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECc
Confidence 4567889999999998 5554 68899998642 110 0 01246666542 3699999
Q ss_pred ecccCCeeEEEEEEeeecCcc--ccCceeeEEEccCC-CccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CCC-eEE
Q psy14896 631 LEQIDAGNYSCNVQSKVSDTG--RNGPFFPLKVFPHS-NFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVP-SYN 705 (813)
Q Consensus 631 ~~~~d~G~Y~C~a~n~~g~~~--~~~~~~~l~v~~~p-~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~p-~i~ 705 (813)
++.+|+|.|.|.|.|..|... .......|.|...+ ..+.+.. ......+.+|+.++|.|.+.|. |.| .|+
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~-----~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~ 162 (222)
T 1q9r_B 88 LRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYP-----LAPGSAAQTNSMVTLGCLVKGYFPEPVTVT 162 (222)
T ss_dssp CCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEE-----ECCCSCCCCSSEEEEEEEEEEEBSSCCEEE
T ss_pred CCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEE-----ccccccccCCCcEEEEEEEccEECCCCEEE
Confidence 999999999999999765210 11123467776522 1111110 0001235689999999999986 888 999
Q ss_pred EEeCCcccCCCce-------eeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEE
Q psy14896 706 WTRRGSPLPRNAY-------FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 757 (813)
Q Consensus 706 W~k~g~~l~~~~~-------~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 757 (813)
|+++|..+..... .....+.|.|.++..+| |.|+|.|.|..|.......|.
T Consensus 163 W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i~ 220 (222)
T 1q9r_B 163 WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 220 (222)
T ss_dssp EGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEECC
T ss_pred EecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEecc
Confidence 9999987643211 01113469999999999 999999999999876555543
No 323
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.74 E-value=9.3e-18 Score=166.10 Aligned_cols=170 Identities=14% Similarity=0.115 Sum_probs=110.1
Q ss_pred CCceeccCCCceEEeCCCCCCCccEEEEccCCC--CC-------------cccCCCeEEEee----CccEEEEeecccCC
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYF--PN-------------FVEEDKRVFVSY----DGALYFSALEQIDA 636 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~--~~-------------~~~~~~~~~~~~----~~~L~i~~~~~~d~ 636 (813)
....+.+|+.++|.|. .+.|.+.|.|+|+.. .. ......|+.+.. +.+|+|.+++.+|+
T Consensus 8 ~~~~v~~G~~v~L~C~--~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~Ds 85 (238)
T 2p1y_A 8 RNKVAVTGGKVTLSCN--QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQT 85 (238)
T ss_dssp SEEEEETTCCEEEEEE--ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGC
T ss_pred cceEEeCCCEEEEEee--cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccC
Confidence 4456788999999999 467889999999621 10 001133555442 34699999999999
Q ss_pred eeEEEEEEeeecCcc--ccCceeeEEEccCCCcccc----ccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCC
Q psy14896 637 GNYSCNVQSKVSDTG--RNGPFFPLKVFPHSNFQQL----KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRG 710 (813)
Q Consensus 637 G~Y~C~a~n~~g~~~--~~~~~~~l~v~~~p~~~~~----~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g 710 (813)
|.|+|.|.|..|... .......|.|...+..... ..+.....+....+.+|++++|.|.+.|.|.|.|.|+|++
T Consensus 86 G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~ 165 (238)
T 2p1y_A 86 SVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQF 165 (238)
T ss_dssp EEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEEC
T ss_pred eeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEEC
Confidence 999999999876321 1112346777655421000 0000001122256889999999999999999999999974
Q ss_pred c--ccC------------CCceeee------cceEEEECCCCCCCCEEEEEEEEcCC
Q psy14896 711 S--PLP------------RNAYFEN------FNRILTIPNVKVEDQGEYICRASNDR 747 (813)
Q Consensus 711 ~--~l~------------~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~a~N~~ 747 (813)
. .+. ...++.. ...+|+|.+++.+|+|.|+|.|.|..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 166 PGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp TTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred CCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 2 110 1112211 13589999999999999999999974
No 324
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.74 E-value=9.5e-18 Score=159.55 Aligned_cols=166 Identities=19% Similarity=0.195 Sum_probs=110.7
Q ss_pred CCCceeecCCCccccccEEEEeeecc-CCCCeEEEeeccccccccccc--------ccccCCCccEEe-eCCeEEEcCCc
Q psy14896 195 QPTDVVFDLSKRSILNDITLSCYAGG-YPNPSYEWFKEDYVQDRLVAN--------LIDPLSDKRFTL-SGGNLIINDPR 264 (813)
Q Consensus 195 ~p~~~~v~~g~~~~g~~v~l~C~~~g-~P~p~v~W~k~g~~l~~~~~~--------~~~~~~~~~~~~-~~~~l~i~~~~ 264 (813)
.|..+.+.+| ++|+|.|.+.+ .|.+.|.|+|+|..+...... ..++....|+.+ .+++|.|.+.
T Consensus 4 ~p~~v~~~~G-----~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v- 77 (193)
T 2if7_A 4 TPLMVNGILG-----ESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNL- 77 (193)
T ss_dssp CCEEEEEETT-----SCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSC-
T ss_pred CCeEEEEEec-----CeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCC-
Confidence 3556666666 77999999975 566799999998654211100 000111124443 3678999986
Q ss_pred cccCCeeEEEEeecCceeeEeeeeEEeeeeecc-cccCCCCceeecCC-CeEEEecCCCCCCcceEEEeeccccccccCC
Q psy14896 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGE-FNLKRAPEIGNQNW-GKAMFCDPPTNYPGVNYYWARDYFPNFVEED 342 (813)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~-~~~~~~~~~~~~~~-~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~ 342 (813)
+.+|+|.|+|.|.|..|.. ...+.|.|..++. +.+.........|. .++|.|.+..+.|.++++|+|+|..+
T Consensus 78 ~~~D~G~Y~C~~~~~~~~~-~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l----- 151 (193)
T 2if7_A 78 KMEDTGSYRAQISTKTSAK-LSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTL----- 151 (193)
T ss_dssp CGGGCEEEEEEEECSSCEE-EEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCTTCEEEEEETTEEE-----
T ss_pred CcccCceEEEEEEecCCCe-EEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCCceEEEEEeCCEEc-----
Confidence 8999999999999988875 4577888765432 22222222223343 68999997555678999999998753
Q ss_pred ccEEEccCccEEEeeeeec-CCeeeEEEEeeecccc
Q psy14896 343 KRVFVSYDGALYFSALEQI-DAGNYSCNVQSKVSDT 377 (813)
Q Consensus 343 ~~~~~~~~~~L~i~~v~~~-D~G~Y~C~a~n~~g~~ 377 (813)
...+.|.|.....+ |+|.|+|.|.|..|..
T Consensus 152 -----~~~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~ 182 (193)
T 2if7_A 152 -----SSQPNLTVSWDPRISSEQDYTCIAENAVSNL 182 (193)
T ss_dssp -----ESSSEEEEEECTTTCSCCEEEEEEEETTEEE
T ss_pred -----CCCCeEEEEeccCcCCCCcEEEEEECCCCcc
Confidence 12346888765555 8999999999998754
No 325
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.74 E-value=4.4e-18 Score=168.01 Aligned_cols=177 Identities=16% Similarity=0.230 Sum_probs=114.6
Q ss_pred CCCceeccCCCceEEeCCCCCCCcc-EEEEccCCC--CC----------cccCCCeEEEee---CccEEEEeecccCCee
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYF--PN----------FVEEDKRVFVSY---DGALYFSALEQIDAGN 638 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~~-~v~W~k~~~--~~----------~~~~~~~~~~~~---~~~L~i~~~~~~d~G~ 638 (813)
+....+.+|+.++|.|.+....+.+ .|.|+|++. .. ......++.... +.+|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 4455678899999999994323344 799999742 11 001134555543 2369999999999999
Q ss_pred EEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCC--CeEEEEeCCcccCCC
Q psy14896 639 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV--PSYNWTRRGSPLPRN 716 (813)
Q Consensus 639 Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~--p~i~W~k~g~~l~~~ 716 (813)
|+|.|.|..+..........|.|...+.. .|..........+.+|+.++|.|.+.|.|+ +.|+|+|||.++..+
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~----~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~ 181 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPKA----APSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAG 181 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCCC----CCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSS
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCCC----CCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCC
Confidence 99999998762111111234555332210 011100011122346889999999998654 389999999988655
Q ss_pred cee----e------ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEE
Q psy14896 717 AYF----E------NFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 755 (813)
Q Consensus 717 ~~~----~------~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 755 (813)
... . ...+.|.|.++..+|+|.|+|.|.|..+..+.++.
T Consensus 182 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 230 (234)
T 2j6e_L 182 VETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVA 230 (234)
T ss_dssp EEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEEC
T ss_pred ccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEecc
Confidence 321 0 12357999999999999999999999877555543
No 326
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.74 E-value=5.3e-18 Score=165.93 Aligned_cols=180 Identities=18% Similarity=0.172 Sum_probs=115.0
Q ss_pred ccccEEEEeeeccCCC-----CeEEEeeccccccccc---ccccccCCCccEEee-------CCeEEEcCCccccCCeeE
Q psy14896 208 ILNDITLSCYAGGYPN-----PSYEWFKEDYVQDRLV---ANLIDPLSDKRFTLS-------GGNLIINDPRQVEDRGSY 272 (813)
Q Consensus 208 ~g~~v~l~C~~~g~P~-----p~v~W~k~g~~l~~~~---~~~~~~~~~~~~~~~-------~~~l~i~~~~~~~d~G~Y 272 (813)
+|++++|.|.+.+.|. +.|.|+|++....-.. ..........++.+. +++|.|.+. +.+|+|.|
T Consensus 9 ~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v-~~~D~G~Y 87 (222)
T 4i0k_A 9 VDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRV-RVTDEGSY 87 (222)
T ss_dssp TTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSC-CGGGCSCE
T ss_pred CCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCc-ccccCEEE
Confidence 4588999999988764 7899999985431000 000011223344432 467888885 89999999
Q ss_pred EEEeecCceeeEeeeeEEeeeeecc-cccC-CCCceeecCCCeEEEecCCCCCCcceEEEee-ccccccccCCccEEEcc
Q psy14896 273 HCKASNKFGSIISESVQLAFGFIGE-FNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWAR-DYFPNFVEEDKRVFVSY 349 (813)
Q Consensus 273 ~C~a~n~~g~~~s~~~~l~v~~~~~-~~~~-~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k-~~~~~~~~~~~~~~~~~ 349 (813)
+|.|.|.. .. +..+.|.|..++. +.+. .....+.+|+.++|.|.+..+.|.+.+.|++ ++..+............
T Consensus 88 ~C~~~~~~-~~-~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~ 165 (222)
T 4i0k_A 88 TCFVSIQD-FD-SAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANE 165 (222)
T ss_dssp EEEEEECC-CC-CCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECT
T ss_pred EEEEEeCC-Cc-eEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCC
Confidence 99999853 22 5566777765422 1122 2234567788899999976788999999999 45443221112222233
Q ss_pred Ccc---EEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCc
Q psy14896 350 DGA---LYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 393 (813)
Q Consensus 350 ~~~---L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~ 393 (813)
++. |.|.++..+|+|.|+|.|.|..|.... .+.|.|..+|.
T Consensus 166 ~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~---~~~l~V~~~p~ 209 (222)
T 4i0k_A 166 RGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDA---HGSVTITGQPL 209 (222)
T ss_dssp TSCEEEEEEEEEECCTTCEEEEEEEETTTTEEE---EEEEECCC---
T ss_pred CCeEEEEEEEEEEeCCCCEEEEEEECCCCCCce---EEEEEEeCCcc
Confidence 443 889999999999999999999876443 37777766543
No 327
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.73 E-value=1.4e-17 Score=166.19 Aligned_cols=167 Identities=19% Similarity=0.196 Sum_probs=110.3
Q ss_pred CCceeccCCCceEEeCCCCCCCccEEEEccCCCCC------------cccCCCeEEEeeCc---cEEEEeecccCCeeEE
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPN------------FVEEDKRVFVSYDG---ALYFSALEQIDAGNYS 640 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~------------~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~ 640 (813)
....+.+|+.++|.|.+ .+.|.+.+.|+|+.... ......++....++ +|+|.+++.+|+|.|.
T Consensus 12 ~~~~v~~G~~v~L~C~~-~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 90 (250)
T 3esu_F 12 SSLSASLGDRVTISCRA-SQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTYF 90 (250)
T ss_dssp SEEEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CEEEeeCCCcEEEEEEe-cccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEEE
Confidence 34567889999999999 78888999999964210 01123455444333 6999999999999999
Q ss_pred EEEEeeecCccccCceeeEEEccCCCcc-----------ccccCCCCCCCCCcCCCCCCeEEEEEEecCCC--CCeEEEE
Q psy14896 641 CNVQSKVSDTGRNGPFFPLKVFPHSNFQ-----------QLKFPNNFPKTFPEAPKAGDKVRLECVAFGYP--VPSYNWT 707 (813)
Q Consensus 641 C~a~n~~g~~~~~~~~~~l~v~~~p~~~-----------~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P--~p~i~W~ 707 (813)
|.|.|..+.... ....|.|..++... ....+.....+....+.+|++++|.|.+.|.| .+.+.|+
T Consensus 91 C~~~n~~~~~~~--~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~ 168 (250)
T 3esu_F 91 CQQGNTLPWTFG--GGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWV 168 (250)
T ss_dssp EEECSSSSCEEC--CCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEE
T ss_pred EEEeeCCCceEC--CCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEEEEE
Confidence 999987653222 22457776542100 00000111112235688999999999999887 7899999
Q ss_pred eC--CcccCCC-----------------ceee------ecceEEEECCCCCCCCEEEEEEEEc
Q psy14896 708 RR--GSPLPRN-----------------AYFE------NFNRILTIPNVKVEDQGEYICRASN 745 (813)
Q Consensus 708 k~--g~~l~~~-----------------~~~~------~~~~~L~i~~v~~~d~G~Y~C~a~N 745 (813)
|+ +..+... .++. ....+|+|.+++.+|+|.|.|.|.|
T Consensus 169 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 169 KQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 98 5443111 1111 1234799999999999999999998
No 328
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.73 E-value=6.8e-18 Score=165.38 Aligned_cols=190 Identities=15% Similarity=0.101 Sum_probs=128.6
Q ss_pred EeCCCceEecccccccccCeEEEEEeeccCCCc---EEEeeccccccceec------cccCCCCCceEE-----------
Q psy14896 466 IKQPTDVVFDLSKRSILNDITLSCYAGGYPNPS---YEWFKEDYVQDRLVA------NLIDPLSDKRFT----------- 525 (813)
Q Consensus 466 ~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~---v~W~k~~~~~~~~~~------~~~~~~~~~~~~----------- 525 (813)
++.|.++.. .+|++++|.|.+.+.|.+. |.|+|++..+..... .........+..
T Consensus 5 V~vp~~V~~-----~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (225)
T 4fmk_A 5 VRVLPEVRG-----RLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNAD 79 (225)
T ss_dssp EECCSEEEE-----ETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSS
T ss_pred EEeCCEEEE-----ecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccc
Confidence 344555554 7899999999999988764 899998754311100 000001111111
Q ss_pred eeCCeEEEeCCCCCCCCceEEEEEEcCceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCCccEEEEcc
Q psy14896 526 LSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWAR 605 (813)
Q Consensus 526 ~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k 605 (813)
..+++|.|.++ +.+|+|.|+|.|.|..+........+.+..++.............++.+.+.|.+..+.|++.+.|++
T Consensus 80 ~~~~sL~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~ 158 (225)
T 4fmk_A 80 LRDATLAFRGL-RVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWIS 158 (225)
T ss_dssp CCBCCEEECSC-CGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEEC
T ss_pred cCcEEEEEccC-CHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEE
Confidence 23467999997 99999999999999877766666667776666655555555566677778888776788999999999
Q ss_pred CCCCCcccCCCeEEEeeCc------cEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccC
Q psy14896 606 DYFPNFVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPH 664 (813)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~------~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~ 664 (813)
++.... .........++ .|.|.++..+|+|.|+|.|.|.+|.... ...+.|.|++.
T Consensus 159 ~~~~~~--~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~-~~~v~l~V~Y~ 220 (225)
T 4fmk_A 159 SLGGEA--KDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPI-LLPVTLSVRYH 220 (225)
T ss_dssp SSCCEE--EEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCE-EEEEECCBTTC
T ss_pred CCcccc--CCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEE-EEEEEEEEEEC
Confidence 986532 11222223333 4999999999999999999999876433 23355556553
No 329
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=99.73 E-value=6.8e-18 Score=155.02 Aligned_cols=117 Identities=13% Similarity=0.176 Sum_probs=95.6
Q ss_pred eEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcCCCC-CC-cccc
Q psy14896 39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGTN-LN-ELDA 116 (813)
Q Consensus 39 ~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~dgs~-~~-~~~~ 116 (813)
+||+|+.. +++|.+|+..|+.+||+||+|++++|++||.+++.. ....+||||.+. ++.|.|+||+. +. .+.+
T Consensus 1 wcY~~~~~-~~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~~--~~~~~WIGl~~~--~~~~~W~dg~~~~~~~y~~ 75 (164)
T 3cfw_A 1 WTYHYSEK-PMNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPF--SRSYYWIGIRKI--GGIWTWVGTNKSLTEEAEN 75 (164)
T ss_dssp CEEEEEEE-EECHHHHHHHHHHHSSEECCCCSHHHHHHHHHHSCC--CTTCEEESEEEE--TTEEEETTTCCBCCTTTCC
T ss_pred CeEEEecC-CcCHHHHHHHHHHCCCEECccCCHHHHHHHHHHhcc--CCccEEEeEECC--CCEEEECCCCcccccccCC
Confidence 49999998 599999999999999999999999999999999742 245799999875 78999999984 53 1257
Q ss_pred ccCCCCCCcc-cCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 117 AFLPEPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 117 ~~~~~p~~~~-~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|..++|++.. .++|+.|..........|.+..|.....|+|++.
T Consensus 76 W~~geP~~~~~~~~Cv~~~~~~~~~~~~W~d~~C~~~~~fICe~~ 120 (164)
T 3cfw_A 76 WGDGEPNNKKNKEDCVEIYIKRNKDAGKWNDDACHKLKAALCYTA 120 (164)
T ss_dssp BCTTCCCCGGGCCCEEEECTTCSSSTTCEEEECTTSCEEEEEEEC
T ss_pred CCCCCCCCCCCCccceeeeccCCCCCCceeCCCCCCCcEeEEccC
Confidence 7777998754 6899999654321245566999999999999995
No 330
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.73 E-value=9.7e-18 Score=163.49 Aligned_cols=180 Identities=13% Similarity=0.179 Sum_probs=113.8
Q ss_pred CceeeCCCceeecCCCccccccEEEEeeeccC-CCCeEEEeecc--cccccccc--c----ccccCCCccEEee----CC
Q psy14896 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGY-PNPSYEWFKED--YVQDRLVA--N----LIDPLSDKRFTLS----GG 256 (813)
Q Consensus 190 P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~-P~p~v~W~k~g--~~l~~~~~--~----~~~~~~~~~~~~~----~~ 256 (813)
|.++..| .+.+.+| ++++|.|.+.+. |.+.|.|||.. ........ . ........++... +.
T Consensus 2 ~~v~~~p-~~~v~~G-----~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 75 (218)
T 3s96_B 2 LVLTQSS-SASFSLG-----ASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADR 75 (218)
T ss_dssp CSEECCS-EEEEETT-----SCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEE
T ss_pred CeEEeCC-cEEECCC-----CcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceE
Confidence 3455556 7777777 779999999998 89999999943 11100000 0 0111122344432 34
Q ss_pred eEEEcCCccccCCeeEEEEeecCce----eeEeeeeEEeeee----ecccccCCCCceeecCCCeEEEecCCCCCCcc-e
Q psy14896 257 NLIINDPRQVEDRGSYHCKASNKFG----SIISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-N 327 (813)
Q Consensus 257 ~l~i~~~~~~~d~G~Y~C~a~n~~g----~~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~ 327 (813)
+|.|.+. +.+|+|.|+|.|.|..| ...+..+.|.|.. +|.+.+.........++.++|.|.+..+.|.+ .
T Consensus 76 ~L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~ 154 (218)
T 3s96_B 76 YLSISNI-QPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVT 154 (218)
T ss_dssp EEEESSC-CGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCE
T ss_pred EEEEccC-CcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeE
Confidence 5888885 89999999999999876 2234557777763 33444434444455677889999976546777 9
Q ss_pred EEEeeccccccccCCccEEEccCc------cEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 328 YYWARDYFPNFVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 328 v~W~k~~~~~~~~~~~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
++|+|||.++............++ .|.|..+..+|+|.|+|.|.|..+.
T Consensus 155 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~ 209 (218)
T 3s96_B 155 VAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDT 209 (218)
T ss_dssp EEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEE
T ss_pred EEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCc
Confidence 999999987533111111111122 3778888888999999999998753
No 331
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.73 E-value=2.8e-18 Score=173.38 Aligned_cols=196 Identities=17% Similarity=0.185 Sum_probs=110.6
Q ss_pred CCCCCceEEEEEEcCceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcc----c
Q psy14896 538 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV----E 613 (813)
Q Consensus 538 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~----~ 613 (813)
++.|.+.|.|.|.|..|..... ..+.|. ..+....+.+|+.++|.|.+ .+ +.+.|.|+|....... .
T Consensus 4 ~~~~~~~y~~~~~~~~g~~~~~-~~~~v~------~~p~~v~v~~G~~v~L~C~~-~~-~~~~v~W~k~~~~~~~~~~~~ 74 (270)
T 3qib_D 4 ERADLIAYLKQATKGGGGSGGG-GGMKVI------QTPRYLVKGQGQKAKMRCIP-EK-GHPVVFWYQQNKNNEFKFLIN 74 (270)
T ss_dssp -------------------------CCCE------EECSEEEEETTSCEEEEEEC-CT-TCCEEEEEEECTTCCEEEEEE
T ss_pred hhhhHHHHHHHHhccCCccccc-cceeEE------eCCCeEEEcCCCCEEEEEEe-cC-CCceEEEEEECCCCCcEEEEE
Confidence 6789999999999987764322 222222 22334567889999999998 44 7789999983211000 0
Q ss_pred --CC---------C-eEEEee----CccEEEEeecccCCeeEEEEEEeeecC-ccccCceeeEEEcc------CCCcccc
Q psy14896 614 --ED---------K-RVFVSY----DGALYFSALEQIDAGNYSCNVQSKVSD-TGRNGPFFPLKVFP------HSNFQQL 670 (813)
Q Consensus 614 --~~---------~-~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~~~~l~v~~------~p~~~~~ 670 (813)
.. . |+.+.. +.+|+|.+++.+|+|.|.|.+.+..+. .........|.|.. +|.+...
T Consensus 75 ~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~ 154 (270)
T 3qib_D 75 FQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVF 154 (270)
T ss_dssp EETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEE
T ss_pred ECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEE
Confidence 00 0 454443 346999999999999999999874321 11112224567765 2221110
Q ss_pred ccCCCCCCCCCcCCCCCCeEEEEEEecC-CCCC-eEEEEeCCcccCCCceee---------------ecceEEEECCCCC
Q psy14896 671 KFPNNFPKTFPEAPKAGDKVRLECVAFG-YPVP-SYNWTRRGSPLPRNAYFE---------------NFNRILTIPNVKV 733 (813)
Q Consensus 671 ~~p~~~~~~~~~~~~~G~~v~l~C~~~g-~P~p-~i~W~k~g~~l~~~~~~~---------------~~~~~L~i~~v~~ 733 (813)
......+..|+.++|.|.+.| .|.| .|+|+|||.++..+.... ...+.|.|.....
T Consensus 155 -------~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~ 227 (270)
T 3qib_D 155 -------EPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFW 227 (270)
T ss_dssp -------ECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHH
T ss_pred -------CCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHh
Confidence 011123456999999999998 6666 899999999987643221 1124588888888
Q ss_pred CC-CEEEEEEEEcCCCc
Q psy14896 734 ED-QGEYICRASNDRSA 749 (813)
Q Consensus 734 ~d-~G~Y~C~a~N~~G~ 749 (813)
+| +|.|+|.|.|....
T Consensus 228 ~d~~g~YtC~v~~~~l~ 244 (270)
T 3qib_D 228 QNPRNHFRCQVQFYGLS 244 (270)
T ss_dssp HSTTCEEEEEEEECCBC
T ss_pred ccCCCeEEEEEEecCCC
Confidence 88 99999999997543
No 332
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.72 E-value=3.7e-17 Score=153.89 Aligned_cols=120 Identities=19% Similarity=0.256 Sum_probs=99.5
Q ss_pred cCCCCCCeEEEEEEecCCCCC--eEEEEeCCcccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEE
Q psy14896 682 EAPKAGDKVRLECVAFGYPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 759 (813)
Q Consensus 682 ~~~~~G~~v~l~C~~~g~P~p--~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 759 (813)
..+..|++++|+|.+ |.|.| .|+|++.+..+ ...........|.|.+++.+|+|.|.|.|.|..|+.+..+.|+|.
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l-~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~ 94 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL-GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVY 94 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT-CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc-CcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEEE
Confidence 467899999999999 99888 99999977666 222334456789999999999999999999999999999999999
Q ss_pred cCCcccccCCceeecCCCeEEEEEEEccc-CC----ceEEEEECCEecccc
Q psy14896 760 AEPNFTIPLTDKHMDNQADLTWTCEAFGV-PD----VTYSWFRNGELGHQM 805 (813)
Q Consensus 760 ~~P~~~~~~~~~~~~~g~~~~l~C~~~g~-p~----~~v~W~k~g~~l~~~ 805 (813)
.+|..+..... .+.+|+.+ |+|.+.|. |. ++|+|||||++|...
T Consensus 95 ~~P~~~~i~~~-~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~ 143 (210)
T 1gsm_A 95 AFPNQLTVSPA-ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGA 143 (210)
T ss_dssp BCCSEEEEESS-SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTC
T ss_pred ecCCCcEEccc-eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccc
Confidence 99986542222 66678888 99999986 63 489999999999654
No 333
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.72 E-value=1.9e-17 Score=168.17 Aligned_cols=183 Identities=17% Similarity=0.203 Sum_probs=119.1
Q ss_pred CCceeccCCCceEEeCCCCCCC--ccEEEEccCCC--CCc--c-------------cCCCeEEEeeC-----ccEEEEee
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYP--GVNYYWARDYF--PNF--V-------------EEDKRVFVSYD-----GALYFSAL 631 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~~--~~~--~-------------~~~~~~~~~~~-----~~L~i~~~ 631 (813)
....+.+|+.++|.|.+ .+.| .+.|.|+|++. ... . ....|+.+..+ ++|+|.++
T Consensus 34 ~~~~v~~G~~v~L~C~~-~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 112 (282)
T 1qok_A 34 GAELVRSGTSVKLSCTA-SGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSL 112 (282)
T ss_dssp CCEEEETTCCEEEEEEE-ESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSC
T ss_pred CCEEEeCCCeEEEEEec-cCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcC
Confidence 35567889999999998 5664 68999999642 110 0 11246665542 46999999
Q ss_pred cccCCeeEEEEEEeeecCc--cccCceeeEEEccCCCccc------cccCC-CCCCCCCcCCCCCCeEEEEEEecCCCCC
Q psy14896 632 EQIDAGNYSCNVQSKVSDT--GRNGPFFPLKVFPHSNFQQ------LKFPN-NFPKTFPEAPKAGDKVRLECVAFGYPVP 702 (813)
Q Consensus 632 ~~~d~G~Y~C~a~n~~g~~--~~~~~~~~l~v~~~p~~~~------~~~p~-~~~~~~~~~~~~G~~v~l~C~~~g~P~p 702 (813)
+.+|+|.|.|.|.|..|.. ........|.|..+|.... ...+. ....+....+.+|++++|.|.+.+.| |
T Consensus 113 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~ 191 (282)
T 1qok_A 113 TSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV-S 191 (282)
T ss_dssp CGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC-S
T ss_pred ChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC-c
Confidence 9999999999999987621 1111234677776542000 00000 00112235688999999999999999 8
Q ss_pred eEEEEe--CCcccC------------CCceee----ecceEEEECCCCCCCCEEEEEEEEcCCCc-eEEEEEEEEEc
Q psy14896 703 SYNWTR--RGSPLP------------RNAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSA-LESSVTISIQA 760 (813)
Q Consensus 703 ~i~W~k--~g~~l~------------~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~V~~ 760 (813)
.|.|+| +|..+. ...++. ....+|+|.+++.+|+|.|.|.|.|..+. -.....|.|..
T Consensus 192 ~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 192 YMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp CCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred eEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEec
Confidence 999999 666542 112221 23457999999999999999999986432 22345677754
No 334
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.72 E-value=6.9e-17 Score=161.33 Aligned_cols=188 Identities=18% Similarity=0.150 Sum_probs=121.9
Q ss_pred CCCceeecCCCccccccEEEEeeeccCC--CCeEEEeecc--cccccccc-------cccccCCCccEEee------CCe
Q psy14896 195 QPTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------GGN 257 (813)
Q Consensus 195 ~p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g--~~l~~~~~-------~~~~~~~~~~~~~~------~~~ 257 (813)
+|..+.+.+| ++|+|.|.+.|.| .+.|.|||++ ..+..... .........|+.+. ..+
T Consensus 6 ~p~~~~v~~G-----~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 80 (256)
T 1nqb_A 6 QSGAELVKPG-----ASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAY 80 (256)
T ss_dssp ECCCEEECTT-----CCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEE
T ss_pred CCCCeeecCC-----CcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEE
Confidence 3455677666 7799999999875 6799999964 22210000 00011123455543 136
Q ss_pred EEEcCCccccCCeeEEEEeecCcee----eEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcc-----eE
Q psy14896 258 LIINDPRQVEDRGSYHCKASNKFGS----IISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-----NY 328 (813)
Q Consensus 258 l~i~~~~~~~d~G~Y~C~a~n~~g~----~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-----~v 328 (813)
|.|.+. +.+|+|.|+|.|.|..|. ..+..+.|.|...+.+...+....+.+|+.++|.|.+ .+.|.+ .+
T Consensus 81 L~I~~v-~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v 158 (256)
T 1nqb_A 81 MQLSSL-TSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRS-SQSIVHSNGNTYL 158 (256)
T ss_dssp EEECSC-CGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEE-SSCCBCTTSCBCE
T ss_pred EEECcC-ChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEe-cCcccccccceEE
Confidence 888885 899999999999998662 2234567777655544444455678899999999996 455554 99
Q ss_pred EEee--ccccccc----------cCCccEEEcc---CccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccC
Q psy14896 329 YWAR--DYFPNFV----------EEDKRVFVSY---DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPH 391 (813)
Q Consensus 329 ~W~k--~~~~~~~----------~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~ 391 (813)
.|+| ++..+.. ....|+.... .++|.|.+++.+|+|.|+|.|.|... ...+....|.|..+
T Consensus 159 ~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~--~~fg~gt~l~V~~~ 234 (256)
T 1nqb_A 159 EWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVP--YTFGGGTKLEIKRA 234 (256)
T ss_dssp EEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS--CEECCCEEEEECC-
T ss_pred EEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCc--eEECCCEEEEEECC
Confidence 9999 5654310 1133444432 23799999999999999999997432 22234467777644
No 335
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.72 E-value=5.3e-17 Score=160.86 Aligned_cols=176 Identities=18% Similarity=0.213 Sum_probs=116.5
Q ss_pred ceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeeccc--ccccccc--cccccCCCccEEee----CCeEEEcC
Q psy14896 191 YFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY--VQDRLVA--NLIDPLSDKRFTLS----GGNLIIND 262 (813)
Q Consensus 191 ~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~--~l~~~~~--~~~~~~~~~~~~~~----~~~l~i~~ 262 (813)
.|+..|..+.+.+| ++|+|.|.+.+.|.+.|.|||+.. .+..... .........++... +.+|.|.+
T Consensus 3 ~v~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 77 (242)
T 2znx_A 3 VLTQSPATLSVTPG-----NSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINS 77 (242)
T ss_dssp CEEEECSEEEECTT-----CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESS
T ss_pred cEEEcCCeEEEcCC-----CcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECC
Confidence 46666788888777 679999999999999999999742 1110000 00011123455543 23688888
Q ss_pred CccccCCeeEEEEeecCceeeEeeeeEEeeeeecc------------cc-cCCCCceeecCCCeEEEecCCCCCC--cce
Q psy14896 263 PRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE------------FN-LKRAPEIGNQNWGKAMFCDPPTNYP--GVN 327 (813)
Q Consensus 263 ~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~------------~~-~~~~~~~~~~~~~~~l~C~~~~~~p--~~~ 327 (813)
. +.+|+|.|+|.|.|..+...+..+.|.|..++. +. ..+....+.+|+.++|.|.+ .+.| .+.
T Consensus 78 v-~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~g~~~~~~~ 155 (242)
T 2znx_A 78 V-ETEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSV-TGDSITSDY 155 (242)
T ss_dssp C-CGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEE-ESSCGGGSC
T ss_pred C-ChHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEE-EccccCCcc
Confidence 5 899999999999998665444556777766542 11 22334568889999999996 4444 589
Q ss_pred EEEeecc--ccccc--------------cCCccEEEcc-----CccEEEeeeeecCCeeeEEEEeee
Q psy14896 328 YYWARDY--FPNFV--------------EEDKRVFVSY-----DGALYFSALEQIDAGNYSCNVQSK 373 (813)
Q Consensus 328 v~W~k~~--~~~~~--------------~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~a~n~ 373 (813)
+.|+|++ ..+.. ....|+.+.. .++|.|.+++.+|+|.|+|.|.|.
T Consensus 156 v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 156 XSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp EEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred eeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 9999963 32110 0134555542 237999999999999999999873
No 336
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=99.72 E-value=1.3e-17 Score=152.81 Aligned_cols=116 Identities=12% Similarity=0.180 Sum_probs=95.4
Q ss_pred eEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcCCC-CCC--ccc
Q psy14896 39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGT-NLN--ELD 115 (813)
Q Consensus 39 ~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~dgs-~~~--~~~ 115 (813)
.||+|+... ++|.+|+..|+.+||+||+|++++|++||.+++... ...+||||.+. ++.|.|+||+ ++. | .
T Consensus 1 w~Y~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~--~~~~WIGl~~~--~~~~~W~dg~~~~~~~~-~ 74 (162)
T 1g1s_A 1 WTYHYSTKA-YSWNISRKYCQNRYTDLVAIQNKNEIDYLNKVLPYY--SSYYWIGIRKN--NKTWTWVGTKKALTNEA-E 74 (162)
T ss_dssp CEEEEEEEE-ECHHHHHHHHHHHSSEECCCCCHHHHHHHHHHSCCC--TTCEEEEEEEE--TTEEEETTTCCBCCTTT-C
T ss_pred CeEEEecCC-cCHHHHHHHHHhcCCEEeeeCCHHHHHHHHHHhccC--CCCEEEeEECC--CCCeEECCCCccCCccc-C
Confidence 489999984 999999999999999999999999999999998432 35799999986 6899999996 664 4 5
Q ss_pred cccCCCCCCcc-cCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 116 AAFLPEPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 116 ~~~~~~p~~~~-~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
+|..++|++.. .++|+.|..........|.+..|.....|+|++.
T Consensus 75 ~W~~geP~~~~~~~~Cv~~~~~~~~~~~~W~d~~C~~~~~fICe~~ 120 (162)
T 1g1s_A 75 NWADNEPNNKRNNEDCVEIYIKSPSAPGKWNDEHCLKKKHALCYTA 120 (162)
T ss_dssp CBCTTCCCCTTSCCCEEEECTTCSSSTTCEEEECTTSCEEEEEEEC
T ss_pred ccCCCCCCCCCCCcceEEEeccCCCCCCeEECCCCCCCCCEEEEeC
Confidence 77777998754 6799999653222245566999999999999995
No 337
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.72 E-value=2e-17 Score=165.55 Aligned_cols=179 Identities=16% Similarity=0.188 Sum_probs=115.2
Q ss_pred CCCceeccCCCceEEeCCCCCCCccEEEEccCCC--CCc-----------ccCCCeEEEe-----eCccEEEEeecccCC
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYF--PNF-----------VEEDKRVFVS-----YDGALYFSALEQIDA 636 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~--~~~-----------~~~~~~~~~~-----~~~~L~i~~~~~~d~ 636 (813)
+....+.+|+.++|.|.+ .+.|.+.|.|+|... ... .....|+.+. .+.+|+|.+++.+|+
T Consensus 10 p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~Ds 88 (256)
T 3tf7_C 10 DARVTVSEGASLQLRCKY-SYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDS 88 (256)
T ss_dssp CSEEEEETTSCEEECCEE-ECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGC
T ss_pred CceEEecCCCeEEEEEEe-CCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccC
Confidence 344567889999999999 677999999998431 100 0112344442 123599999999999
Q ss_pred eeEEEEEEeeecCcc-ccCceeeEEEccC-----------------CCccccccCCCCCCCCCcCCCCCCeEEEEEEecC
Q psy14896 637 GNYSCNVQSKVSDTG-RNGPFFPLKVFPH-----------------SNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 698 (813)
Q Consensus 637 G~Y~C~a~n~~g~~~-~~~~~~~l~v~~~-----------------p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g 698 (813)
|.|.|.|.|..+... .......|.|... +....+. ..+....+.+|++++|.|.+.+
T Consensus 89 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~-----~~p~~~~v~~G~~v~L~C~~~~ 163 (256)
T 3tf7_C 89 AVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVT-----QSPRNKVTVTGENVTLSCRQTN 163 (256)
T ss_dssp SEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEE-----ESCSEEEEETTCCEEECEEECS
T ss_pred EEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEE-----ecCCEEEEeCCCcEEEEEEcCC
Confidence 999999998764211 1122345677651 1111111 1222345679999999999998
Q ss_pred CCCCeEEEEeCCc--ccCC---------------Ccee-----eecceEEEECCCCCCCCEEEEEEEEcCCCceEE--EE
Q psy14896 699 YPVPSYNWTRRGS--PLPR---------------NAYF-----ENFNRILTIPNVKVEDQGEYICRASNDRSALES--SV 754 (813)
Q Consensus 699 ~P~p~i~W~k~g~--~l~~---------------~~~~-----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~--~~ 754 (813)
. .|.+.|+|... .+.. ..++ .....+|+|.+++.+|+|.|.|.|.|..|.... -.
T Consensus 164 ~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~fG~gt 242 (256)
T 3tf7_C 164 S-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLYFGEGS 242 (256)
T ss_dssp C-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEEECCCE
T ss_pred C-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccEECCCe
Confidence 7 67999999432 1100 0111 122457999999999999999999998775321 34
Q ss_pred EEEEEc
Q psy14896 755 TISIQA 760 (813)
Q Consensus 755 ~l~V~~ 760 (813)
.|.|..
T Consensus 243 ~l~v~~ 248 (256)
T 3tf7_C 243 KLTVLE 248 (256)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 566653
No 338
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=99.72 E-value=1.4e-17 Score=151.81 Aligned_cols=117 Identities=15% Similarity=0.192 Sum_probs=95.2
Q ss_pred eEEEEecCCcCCHHHHHhHcccCCCeEeeeCCHhHHHHHHHHhhhcCCCCceEEEEeccCCCCCeEEcCCC-CCC-cccc
Q psy14896 39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGT-NLN-ELDA 116 (813)
Q Consensus 39 ~Cy~~~~~~~~~~~~a~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~~~W~dgs-~~~-~~~~ 116 (813)
.||+|+... ++|.+|+..|+.+||+||+|+|++|++||.+++.. ....+||||.+. ++.|.|+||+ ++. .+.+
T Consensus 1 w~Y~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~--~~~~~WIGl~~~--~~~~~W~dg~~~~~~~y~~ 75 (157)
T 1g1t_A 1 WSYNTSTEA-MTYDEASAYCQQRYTHLVAIQNKEEIEYLNSILSY--SPSYYWIGIRKV--NNVWVWVGTQKPLTEEAKN 75 (157)
T ss_dssp CEEEECSSC-BCHHHHHHHHHHHSSEECCCCSHHHHHHHHHHSCC--CTTCEEESEEEE--TTEEEETTTCCBCCTTTCC
T ss_pred CceEeCCCc-cCHHHHHHHHHHCCCEEcccCCHHHHHHHHHHhcc--CCCCEEEEEECC--CCeeEEeCCCccCCcccCC
Confidence 389999984 99999999999999999999999999999998743 235799999975 6799999998 453 2357
Q ss_pred ccCCCCCCcc-cCCeEEEEeeccccccceeeccCCCceeeeeeec
Q psy14896 117 AFLPEPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (813)
Q Consensus 117 ~~~~~p~~~~-~~~c~~~~~~~~~~~l~i~~~~~~d~~~y~C~~~ 160 (813)
|..++|++.. .++|+.|..........|.+..|.....|+|++.
T Consensus 76 W~~geP~~~~~~~~Cv~~~~~~~~~~~~W~d~~C~~~~~fICe~~ 120 (157)
T 1g1t_A 76 WAPGEPNNRQKDEDCVEIYIKREKDVGMWNDERCSKKKLALCYTA 120 (157)
T ss_dssp BCTTCCCCCSTTCCEEEECTTCSSSTTCEEEECTTSCBEEEEEEC
T ss_pred CCCCcCCCCCCCCCceEEeCcCCCCCCccccCCCCCCcceEeCcC
Confidence 7777998754 6899999654322245566999999999999995
No 339
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.72 E-value=2.8e-17 Score=164.56 Aligned_cols=186 Identities=15% Similarity=0.180 Sum_probs=116.9
Q ss_pred CceeccCCCceEEeCCCCCCC--ccEEEEccCC--CCCc---------------ccCCCeEEEeeCc-----cEEEEeec
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYP--GVNYYWARDY--FPNF---------------VEEDKRVFVSYDG-----ALYFSALE 632 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~--~~~~---------------~~~~~~~~~~~~~-----~L~i~~~~ 632 (813)
+..+.+|+.++|.|.+ .+.+ .+.|.|||.. .... .....|+.+..++ +|+|.+++
T Consensus 11 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (256)
T 3umt_A 11 LELVKPGASVKISCKT-SGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLT 89 (256)
T ss_dssp CEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred ceEEcCCCCEEEEEEE-ecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCC
Confidence 4557889999999998 5655 6899999843 1110 0123456555433 39999999
Q ss_pred ccCCeeEEEEEEeeecC-ccccCceeeEEEccCCCc--------cccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCe
Q psy14896 633 QIDAGNYSCNVQSKVSD-TGRNGPFFPLKVFPHSNF--------QQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS 703 (813)
Q Consensus 633 ~~d~G~Y~C~a~n~~g~-~~~~~~~~~l~v~~~p~~--------~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~ 703 (813)
.+|+|.|.|.|.|..+. .........|.|...+.. .....|.....+....+.+|++++|.|.+.+.|.|.
T Consensus 90 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 169 (256)
T 3umt_A 90 SEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGSN 169 (256)
T ss_dssp GGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTTC
T ss_pred cccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCcE
Confidence 99999999999987220 011122356777752110 000000000112235688999999999999999999
Q ss_pred EEEEeC--CcccC------------CCcee----eecceEEEECCCCCCCCEEEEEEEEcCCCce-EEEEEEEEEcCCc
Q psy14896 704 YNWTRR--GSPLP------------RNAYF----ENFNRILTIPNVKVEDQGEYICRASNDRSAL-ESSVTISIQAEPN 763 (813)
Q Consensus 704 i~W~k~--g~~l~------------~~~~~----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~-~~~~~l~V~~~P~ 763 (813)
|.|+|+ +..+. ...++ .....+|+|.+++.+|+|.|.|.|.|..+.. .....|.|..++.
T Consensus 170 v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~~ 248 (256)
T 3umt_A 170 LNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRAAA 248 (256)
T ss_dssp EEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC----
T ss_pred EEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECCCc
Confidence 999995 22221 01122 1223469999999999999999999965433 2357788876553
No 340
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.72 E-value=9.5e-18 Score=163.73 Aligned_cols=170 Identities=18% Similarity=0.290 Sum_probs=115.5
Q ss_pred CceeccCCCceEEeCCCCCCC--ccEEEEccCCCCC----cc------c---------CCCeEEEeeC---c--cEEEEe
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYP--GVNYYWARDYFPN----FV------E---------EDKRVFVSYD---G--ALYFSA 630 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~~~~----~~------~---------~~~~~~~~~~---~--~L~i~~ 630 (813)
+..+.+|+.++|.|.+ .+.+ .+.|.|+|++... .. . ...|+.+..+ + +|+|.+
T Consensus 9 ~~~~~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (220)
T 1pz5_B 9 GGLVQPGGSMKLSCVA-SGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNN 87 (220)
T ss_dssp CEEECTTCCEEEEEEE-ESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CEEEcCCCeEEEEEEE-cCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEcc
Confidence 4567889999999998 5555 6899999964210 00 0 0246665532 2 799999
Q ss_pred ecccCCeeEEEEEEeeecCccccCceeeEEEccC----CCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CCC-eE
Q psy14896 631 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPH----SNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVP-SY 704 (813)
Q Consensus 631 ~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~----p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~p-~i 704 (813)
++.+|+|.|.|.+.|..+..........|.|... |.+.. .+. ...+.+|+.++|.|.+.|. |.| .|
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~--~~~------~~~~~~g~~v~L~C~~~g~~P~p~~v 159 (220)
T 1pz5_B 88 LRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYP--LVP------GCSDTSGSSVTLGCLVKGYFPEPVTV 159 (220)
T ss_dssp CCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEE--ECC------CSCCSCSSSEEEEEEEEEEBSSCCEE
T ss_pred CCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEE--ccc------ccccCCCCcEEEEEEEEEEeCCCeEE
Confidence 9999999999999987532111112356777632 22211 111 1345789999999999987 988 99
Q ss_pred EEEeCCcccC----CCc---eeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEE
Q psy14896 705 NWTRRGSPLP----RNA---YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 756 (813)
Q Consensus 705 ~W~k~g~~l~----~~~---~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 756 (813)
+|+|++..+. ... ......+.|.|.++..+| |.|+|.|.|..|..++++.+
T Consensus 160 ~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~ 217 (220)
T 1pz5_B 160 KWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKEI 217 (220)
T ss_dssp EEGGGTCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred EEecCCcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeecC
Confidence 9999987421 100 011124679999998877 99999999999987766543
No 341
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.72 E-value=4.2e-17 Score=163.31 Aligned_cols=170 Identities=19% Similarity=0.258 Sum_probs=110.0
Q ss_pred CceeccCCCceEEeCCCCCC--CccEEEEccCCC--CCc----------ccCCCeEEEeeCc---cEEEEeecccCCeeE
Q psy14896 577 PEIGNQNWGKAMFCDPPTNY--PGVNYYWARDYF--PNF----------VEEDKRVFVSYDG---ALYFSALEQIDAGNY 639 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~--p~~~v~W~k~~~--~~~----------~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y 639 (813)
...+.+|+.++|.|.+ .+. |.+.+.|+|++. ... .....|+.+..++ +|.|.+++.+|+|.|
T Consensus 11 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 89 (256)
T 3ux9_B 11 SVSGAPGQRVTISCSG-SSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADY 89 (256)
T ss_dssp EEEECTTCCEEEEEEC-CTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred cEEEcCCCcEEEEEec-CCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEE
Confidence 3567889999999999 455 788999999531 110 0123455555433 599999999999999
Q ss_pred EEEEEeeecCccccCceeeEEEccCCCccccc------------cCCCCCCCCCcCCCCCCeEEEEEEecCCC--CCeEE
Q psy14896 640 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLK------------FPNNFPKTFPEAPKAGDKVRLECVAFGYP--VPSYN 705 (813)
Q Consensus 640 ~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~------------~p~~~~~~~~~~~~~G~~v~l~C~~~g~P--~p~i~ 705 (813)
.|.|.|..+..........|.|..++...... .+..+.......+.+|++++|.|.+.+.| .+.+.
T Consensus 90 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 169 (256)
T 3ux9_B 90 YCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMS 169 (256)
T ss_dssp EEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEE
T ss_pred EEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEEE
Confidence 99999865432222334567777655211000 00000011124578999999999999877 78999
Q ss_pred EEeC--CcccC------CC-----------ceee------ecceEEEECCCCCCCCEEEEEEEEcCC
Q psy14896 706 WTRR--GSPLP------RN-----------AYFE------NFNRILTIPNVKVEDQGEYICRASNDR 747 (813)
Q Consensus 706 W~k~--g~~l~------~~-----------~~~~------~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 747 (813)
|+|+ +..+. .. .++. ....+|+|.+++.+|+|.|.|.|.|..
T Consensus 170 W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 170 WVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 9997 33221 00 0111 123469999999999999999999963
No 342
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.72 E-value=1e-16 Score=160.48 Aligned_cols=186 Identities=17% Similarity=0.171 Sum_probs=119.3
Q ss_pred CCceeecCCCccccccEEEEeeeccCC--CCeEEEeecc--cccccccc------cccccCCCccEEee------CCeEE
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA------NLIDPLSDKRFTLS------GGNLI 259 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g--~~l~~~~~------~~~~~~~~~~~~~~------~~~l~ 259 (813)
|....+.+| ++|+|.|.+.|.| .+.|.|||++ ..+..... .........|+.+. ..+|.
T Consensus 7 p~~~~v~~G-----~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 81 (257)
T 1f3r_B 7 SGPGLVRPS-----ETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLK 81 (257)
T ss_dssp ECCSEECTT-----SEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEE
T ss_pred CCCccccCC-----ceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEE
Confidence 334556565 7799999999875 7899999973 22211000 00011123455543 23788
Q ss_pred EcCCccccCCeeEEEEeecCce--------eeEeeeeEEeeeeec-------------cccc--CCCCceeecCCCeEEE
Q psy14896 260 INDPRQVEDRGSYHCKASNKFG--------SIISESVQLAFGFIG-------------EFNL--KRAPEIGNQNWGKAMF 316 (813)
Q Consensus 260 i~~~~~~~d~G~Y~C~a~n~~g--------~~~s~~~~l~v~~~~-------------~~~~--~~~~~~~~~~~~~~l~ 316 (813)
|.+. +.+|+|.|+|.|.|..| ...+..+.|.|...+ ++.+ .+....+.+|+.++|.
T Consensus 82 I~~v-~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~ 160 (257)
T 1f3r_B 82 MNSL-QTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLS 160 (257)
T ss_dssp EESC-CTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEE
T ss_pred ECCC-CcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEE
Confidence 8885 89999999999999854 112345667776542 1112 2334457789999999
Q ss_pred ecCCCCCCcceEEEee--ccccccc----------cCCccEEEcc---CccEEEeeeeecCCeeeEEEEeeeccccCCCC
Q psy14896 317 CDPPTNYPGVNYYWAR--DYFPNFV----------EEDKRVFVSY---DGALYFSALEQIDAGNYSCNVQSKVSDTGRNG 381 (813)
Q Consensus 317 C~~~~~~p~~~v~W~k--~~~~~~~----------~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s 381 (813)
|.+ .+.|.+.+.|+| +|..+.. ....|+.+.. ..+|.|.+++.+|+|.|+|.|.|.. ...+
T Consensus 161 C~~-~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~---~~~g 236 (257)
T 1f3r_B 161 CKG-SQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG---YTFG 236 (257)
T ss_dssp EEC-SSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS---EEEC
T ss_pred EEE-CCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC---CeEC
Confidence 996 566778999999 5554311 1134554432 2379999999999999999999864 1222
Q ss_pred CceeeEEccC
Q psy14896 382 PFFPLKVFPH 391 (813)
Q Consensus 382 ~~~~l~v~~~ 391 (813)
....|.|...
T Consensus 237 ~gt~l~V~~~ 246 (257)
T 1f3r_B 237 AGTKLELKAA 246 (257)
T ss_dssp CCCEECCSSS
T ss_pred CCEEEEEeCC
Confidence 3356666544
No 343
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.72 E-value=2.2e-17 Score=164.92 Aligned_cols=188 Identities=16% Similarity=0.160 Sum_probs=119.7
Q ss_pred CCCceeccCCCceEEeCCCCCCC--ccEEEEccCC--CCCc---------------ccCCCeEEEeeCc-----cEEEEe
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYP--GVNYYWARDY--FPNF---------------VEEDKRVFVSYDG-----ALYFSA 630 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~--~~~~---------------~~~~~~~~~~~~~-----~L~i~~ 630 (813)
+.+..+.+|+.++|.|.+ .+.+ .+.|.|+|.. .... .....|+.+..++ +|+|.+
T Consensus 8 p~~~~v~~G~~v~L~C~~-~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 86 (253)
T 3uzq_A 8 SGAELVKPGASVRLSCTA-SGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSS 86 (253)
T ss_dssp CCCEEECTTCCEEEEEEE-CSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCeeecCCCcEEEEEEe-eCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCC
Confidence 445678899999999998 5644 7899999932 1110 0112455555433 399999
Q ss_pred ecccCCeeEEEEEEeeecCccccCceeeEEEccCCCcc-------ccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCC-
Q psy14896 631 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ-------QLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP- 702 (813)
Q Consensus 631 ~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~-------~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p- 702 (813)
++.+|+|.|.|.|.|..+... .....|.|...+... ....|.....+....+.+|++++|.|.+.+.|.|
T Consensus 87 v~~~DsG~Y~C~~~~~~~~~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 164 (253)
T 3uzq_A 87 LTSGDTAVYYCSRGWEGFAYW--GQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRY 164 (253)
T ss_dssp CCGGGCEEEEEEECSSSCCEE--CCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEET
T ss_pred CCcccCEEEEEEEeeCCccEE--CCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccC
Confidence 999999999999998554321 123567776421000 0000000111223568899999999999999887
Q ss_pred ---eEEEEeC--CcccC------------CCceee----ecceEEEECCCCCCCCEEEEEEEEcCCCce-EEEEEEEEEc
Q psy14896 703 ---SYNWTRR--GSPLP------------RNAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSAL-ESSVTISIQA 760 (813)
Q Consensus 703 ---~i~W~k~--g~~l~------------~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~-~~~~~l~V~~ 760 (813)
.+.|+|+ +..+. ...++. ....+|+|.+++.+|+|.|.|.|.|..+.. ..-..|.|..
T Consensus 165 ~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~ 244 (253)
T 3uzq_A 165 GNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKR 244 (253)
T ss_dssp TEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECC
T ss_pred CCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcC
Confidence 9999995 33221 011121 123479999999999999999999975543 3356788877
Q ss_pred CCccc
Q psy14896 761 EPNFT 765 (813)
Q Consensus 761 ~P~~~ 765 (813)
.+.+.
T Consensus 245 ~~~~~ 249 (253)
T 3uzq_A 245 PLEHH 249 (253)
T ss_dssp C----
T ss_pred CCCCc
Confidence 66554
No 344
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.72 E-value=1.9e-17 Score=163.72 Aligned_cols=181 Identities=17% Similarity=0.231 Sum_probs=120.3
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeeccc--cccccc--ccccccCCCccEEee----CCeEEE
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY--VQDRLV--ANLIDPLSDKRFTLS----GGNLII 260 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~--~l~~~~--~~~~~~~~~~~~~~~----~~~l~i 260 (813)
.+.+...|..+.+.+| ++++|.|.+.+.|.+.|.|||++. ...... ..........++... +.+|.|
T Consensus 24 ~~~v~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 98 (237)
T 3sob_L 24 DIQMTQSPSSLSASVG-----DRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTI 98 (237)
T ss_dssp CCCEEEECSEEEEETT-----CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred cceEEeCCCeEEEeCC-----CcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEE
Confidence 3556777888888777 679999999998999999999541 110000 000111223455433 346888
Q ss_pred cCCccccCCeeEEEEeecCceeeEeeeeEEeeee---ecccccCCCCceeecCCCeEEEecCCCCCC-cceEEEeecccc
Q psy14896 261 NDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF---IGEFNLKRAPEIGNQNWGKAMFCDPPTNYP-GVNYYWARDYFP 336 (813)
Q Consensus 261 ~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~---~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p-~~~v~W~k~~~~ 336 (813)
.+. +.+|+|.|+|.|.|..+......+.|.|.. +|.+.+.........|+.++|.|.+..+.| .++++|+|||.+
T Consensus 99 ~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~ 177 (237)
T 3sob_L 99 SSL-QPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNAL 177 (237)
T ss_dssp SSC-CGGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred CCC-ChhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCC
Confidence 885 899999999999987765445556666643 233333344444456778999999765566 689999999987
Q ss_pred cccc--CCccEEEccCc------cEEEeeeeecCCeeeEEEEeeecc
Q psy14896 337 NFVE--EDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 337 ~~~~--~~~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g 375 (813)
+... .........++ .|.|..+..+|+|.|+|.|.|...
T Consensus 178 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 224 (237)
T 3sob_L 178 QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGL 224 (237)
T ss_dssp CCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTC
T ss_pred CCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCC
Confidence 5321 11111112222 588888999999999999999764
No 345
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.72 E-value=3.2e-18 Score=166.53 Aligned_cols=181 Identities=14% Similarity=0.198 Sum_probs=110.7
Q ss_pred CCCceeeCCCcee--ecCCCccccccEEEEeeeccC---CC-CeEEEeecccccccccccccccCCCccEEeeCCeEEEc
Q psy14896 188 RGPYFIKQPTDVV--FDLSKRSILNDITLSCYAGGY---PN-PSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN 261 (813)
Q Consensus 188 ~~P~~~~~p~~~~--v~~g~~~~g~~v~l~C~~~g~---P~-p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~ 261 (813)
.+|.+...|.... +.+| ++++|.|.+.|. |. +.|+|||++..+............+.++.. .++|.|.
T Consensus 8 ~~p~v~~~pp~~~~~v~~G-----~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~-~~~L~I~ 81 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMIS-----LTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRV-VSTLPIQ 81 (218)
T ss_dssp -CCEEEEECCCHHHHHCTT-----SCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEE-EEEEECC
T ss_pred CCCEEEEECcCHHHhhccC-----CCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEE-EEEEEEc
Confidence 3566655555443 5555 779999999886 43 799999999766322110000111222222 3457776
Q ss_pred CCccccCCeeEEEEeecCceee-EeeeeEE--eeeeecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEEeeccccc
Q psy14896 262 DPRQVEDRGSYHCKASNKFGSI-ISESVQL--AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPN 337 (813)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~~-~s~~~~l--~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~k~~~~~ 337 (813)
+ ++.+|+|.|+|.|.|..+.. ....+.+ .+..+|.+.+.........|+.++|.|.+.+.+|.+ +|+|+|||.++
T Consensus 82 ~-~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~ 160 (218)
T 2rgs_A 82 H-QDWMSGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTE 160 (218)
T ss_dssp H-HHHHTTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred H-HHcCCCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEec
Confidence 6 58999999999999987643 1223322 334445554443333333578889999975446765 99999999875
Q ss_pred cccCCccEEEccCccEEE------eeeeecCCeeeEEEEeeecc
Q psy14896 338 FVEEDKRVFVSYDGALYF------SALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 338 ~~~~~~~~~~~~~~~L~i------~~v~~~D~G~Y~C~a~n~~g 375 (813)
......+.....+|++.+ .....+|.|.|+|.|.|...
T Consensus 161 ~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l 204 (218)
T 2rgs_A 161 ENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGL 204 (218)
T ss_dssp CCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTS
T ss_pred cCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCC
Confidence 221122233355665444 33334469999999999764
No 346
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.72 E-value=1.1e-16 Score=158.50 Aligned_cols=176 Identities=17% Similarity=0.257 Sum_probs=118.3
Q ss_pred ceeeCCCceeecCCCccccccEEEEeeeccCC----CCeEEEeecc--cccccccc--cccccCCCccEEee--C--CeE
Q psy14896 191 YFIKQPTDVVFDLSKRSILNDITLSCYAGGYP----NPSYEWFKED--YVQDRLVA--NLIDPLSDKRFTLS--G--GNL 258 (813)
Q Consensus 191 ~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P----~p~v~W~k~g--~~l~~~~~--~~~~~~~~~~~~~~--~--~~l 258 (813)
.|+..|.++.+.+| ++|+|.|.+.+.| .+.|.|||++ ..+..... .........++... + .+|
T Consensus 3 ~v~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L 77 (240)
T 1moe_A 3 VLTQSPASLAVSLG-----QRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTL 77 (240)
T ss_dssp CEEEECSEEEECTT-----SCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEE
T ss_pred ceEeeCCeEEecCC-----CCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEE
Confidence 45666777888777 6799999999988 7899999973 22110000 00111123455543 1 267
Q ss_pred EEcCCccccCCeeEEEEeecCceeeEeeeeEEeeeeec-----c-cccCCCCceeecCCCeEEEecCCCCCC--cceEEE
Q psy14896 259 IINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG-----E-FNLKRAPEIGNQNWGKAMFCDPPTNYP--GVNYYW 330 (813)
Q Consensus 259 ~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~-----~-~~~~~~~~~~~~~~~~~l~C~~~~~~p--~~~v~W 330 (813)
.|.+. +.+|+|.|+|.|.|..+...+..+.|.|...+ . +...+....+.+|+.++|.|.+ .+.| .+.+.|
T Consensus 78 ~I~~v-~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~g~p~~~~~v~W 155 (240)
T 1moe_A 78 IIDPV-EADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTA-SGFNIKDTYMHW 155 (240)
T ss_dssp EESSC-CGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEE-ESSCGGGSCEEE
T ss_pred EEcCC-ChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEE-cCccCCCCEEEE
Confidence 88775 89999999999999876544556677776543 2 2223456678889999999996 4555 469999
Q ss_pred eec--cccccc---------------cCCccEEEccC-----ccEEEeeeeecCCeeeEEEEeee
Q psy14896 331 ARD--YFPNFV---------------EEDKRVFVSYD-----GALYFSALEQIDAGNYSCNVQSK 373 (813)
Q Consensus 331 ~k~--~~~~~~---------------~~~~~~~~~~~-----~~L~i~~v~~~D~G~Y~C~a~n~ 373 (813)
+|+ +..... ....|+.+..+ .+|.|.+++.+|+|.|+|.|.+.
T Consensus 156 ~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 156 VKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY 220 (240)
T ss_dssp EEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECST
T ss_pred EEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEec
Confidence 997 332110 01335555432 37999999999999999999853
No 347
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.71 E-value=1.6e-17 Score=165.95 Aligned_cols=180 Identities=18% Similarity=0.207 Sum_probs=117.4
Q ss_pred CceeeCCCceeecCCCccccccEEEEeeeccCC-----CCeEEEeeccc--ccccccc--cccccCCCccEEee-C---C
Q psy14896 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYP-----NPSYEWFKEDY--VQDRLVA--NLIDPLSDKRFTLS-G---G 256 (813)
Q Consensus 190 P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P-----~p~v~W~k~g~--~l~~~~~--~~~~~~~~~~~~~~-~---~ 256 (813)
+.++..|..+.+.+| ++|+|.|.+.+.| .+.|.|||++. .+..... .........++... + .
T Consensus 35 ~~v~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 109 (252)
T 3bkj_L 35 VLMTQTPLSLPVNLG-----EQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDF 109 (252)
T ss_dssp CCEEEECSEEEECTT-----SCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEE
T ss_pred cEEEeCCceEEEeCC-----CcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEE
Confidence 456666788888777 6799999999887 68999999762 1100000 00011123455443 2 2
Q ss_pred eEEEcCCccccCCeeEEEEeecCceeeEeeeeEEeeee---ecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEEee
Q psy14896 257 NLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF---IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWAR 332 (813)
Q Consensus 257 ~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~---~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~k 332 (813)
+|.|.+. +.+|+|.|+|.|.|..+...+..+.|.|.. +|.+.+.........|+.++|.|.+.+..|.+ +|+|+|
T Consensus 110 ~L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k 188 (252)
T 3bkj_L 110 TLRISRV-EAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI 188 (252)
T ss_dssp EEEESSC-CGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEEECCC-CcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEE
Confidence 6888885 899999999999998664434445666643 23333333333344688899999975545664 899999
Q ss_pred cccccccc--CCccEEEccCc------cEEEeeeeecCCeeeEEEEeeecc
Q psy14896 333 DYFPNFVE--EDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 333 ~~~~~~~~--~~~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g 375 (813)
||+++... .........++ .|.|.++..+|+|.|+|.|.|...
T Consensus 189 ~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 239 (252)
T 3bkj_L 189 DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 239 (252)
T ss_dssp TTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTC
T ss_pred CCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCC
Confidence 99874321 00111122333 489999999999999999998654
No 348
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.71 E-value=3e-17 Score=159.19 Aligned_cols=177 Identities=20% Similarity=0.258 Sum_probs=114.8
Q ss_pred eeeCCCceeecCCCccccccEEEEeeeccCC---CCeEEEeecc--cccccccc--cccccCCCccEEee--C--CeEEE
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYP---NPSYEWFKED--YVQDRLVA--NLIDPLSDKRFTLS--G--GNLII 260 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P---~p~v~W~k~g--~~l~~~~~--~~~~~~~~~~~~~~--~--~~l~i 260 (813)
++. |..+.+.+| ++++|.|.+.|.| .+.|.|||++ ..+..... .........++... + .+|.|
T Consensus 4 v~~-p~~~~v~~G-----~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 77 (212)
T 1q0x_L 4 VTQ-ESALTTSPG-----ETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTI 77 (212)
T ss_dssp EEE-CSEEEECTT-----CCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred EEC-CCeEeecCC-----CCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEE
Confidence 445 777777777 7799999999877 4799999984 22210000 00011122444432 2 26888
Q ss_pred cCCccccCCeeEEEEeecCceeeEeeeeEEeee----eecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEEeeccc
Q psy14896 261 NDPRQVEDRGSYHCKASNKFGSIISESVQLAFG----FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYF 335 (813)
Q Consensus 261 ~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~----~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~k~~~ 335 (813)
.+. +.+|+|.|+|.|.|..+...+..+.|.|. .+|.+.+.........|+.++|.|.+.+..|++ .|+|+|||+
T Consensus 78 ~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 156 (212)
T 1q0x_L 78 TGA-QTEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGT 156 (212)
T ss_dssp SSC-CGGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred CCC-CccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCE
Confidence 885 89999999999999877544555666663 233343333333444677889999975445554 999999998
Q ss_pred cccccCC-ccEEEccCc------cEEEeeeeecCCeeeEEEEeeecc
Q psy14896 336 PNFVEED-KRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 336 ~~~~~~~-~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g 375 (813)
++..... .......++ .|.|..+..+|+|.|+|.|.|...
T Consensus 157 ~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 203 (212)
T 1q0x_L 157 PVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGH 203 (212)
T ss_dssp EECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTE
T ss_pred eCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCc
Confidence 7432110 111222333 588999999999999999998754
No 349
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.71 E-value=4.3e-17 Score=161.47 Aligned_cols=169 Identities=17% Similarity=0.152 Sum_probs=110.4
Q ss_pred CCCceeccCCCceEEeCCCCCCCccEEEEccCCC--CC--cc--------cCCCeEEEeeC---ccEEEEeecccCCeeE
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYF--PN--FV--------EEDKRVFVSYD---GALYFSALEQIDAGNY 639 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~--~~--~~--------~~~~~~~~~~~---~~L~i~~~~~~d~G~Y 639 (813)
+....+.+|+.++|.|.+ .+.|.+.|.|+|+.. .. .+ ....|+.+..+ .+|+|.+++.+|+|.|
T Consensus 8 p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (242)
T 2znx_A 8 PATLSVTPGNSVSLSCRA-SQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMY 86 (242)
T ss_dssp CSEEEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCeEEEcCCCcEEEEEEe-CCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEE
Confidence 344567889999999999 688889999999632 11 01 12346655433 3699999999999999
Q ss_pred EEEEEeeecCccccCceeeEEEccCCCccc-----cccCCCCCCCCCcCCCCCCeEEEEEEecCCC--CCeEEEEeC--C
Q psy14896 640 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQ-----LKFPNNFPKTFPEAPKAGDKVRLECVAFGYP--VPSYNWTRR--G 710 (813)
Q Consensus 640 ~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~-----~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P--~p~i~W~k~--g 710 (813)
.|.|.|..+... .....|.|..+|.... ...+..........+.+|++++|.|.+.|.| .+.|.|+|+ |
T Consensus 87 ~C~~~n~~~~~~--~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~ 164 (242)
T 2znx_A 87 FCQQSNSXPYTF--GGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPG 164 (242)
T ss_dssp EEEECSSSSCEE--CCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTT
T ss_pred EEeEecCCceEE--CCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCCC
Confidence 999998754211 1235678877653100 0000000011124588999999999999887 478999995 3
Q ss_pred cccC-------C---------Cceeee------cceEEEECCCCCCCCEEEEEEEEcC
Q psy14896 711 SPLP-------R---------NAYFEN------FNRILTIPNVKVEDQGEYICRASND 746 (813)
Q Consensus 711 ~~l~-------~---------~~~~~~------~~~~L~i~~v~~~d~G~Y~C~a~N~ 746 (813)
..+. . ..++.. ...+|+|.+++.+|+|.|.|.|.|.
T Consensus 165 ~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 165 NRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp SCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred CCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 3321 0 122221 2358999999999999999999984
No 350
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.71 E-value=1.1e-17 Score=167.16 Aligned_cols=167 Identities=17% Similarity=0.155 Sum_probs=113.1
Q ss_pred CCceeccCCCceEEeCCCCCCC-----ccEEEEccCCCCCc------------ccCCCeEEEeeCc---cEEEEeecccC
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYP-----GVNYYWARDYFPNF------------VEEDKRVFVSYDG---ALYFSALEQID 635 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p-----~~~v~W~k~~~~~~------------~~~~~~~~~~~~~---~L~i~~~~~~d 635 (813)
....+.+|+.++|.|.+ .+.| .+.|.|+|++.... .....|+.+..++ +|+|.+++.+|
T Consensus 42 ~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 120 (252)
T 3bkj_L 42 LSLPVNLGEQASISCRS-SQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAED 120 (252)
T ss_dssp SEEEECTTSCEEEEEEE-SSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred ceEEEeCCCcEEEEEEc-CCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCccc
Confidence 44567889999999999 6766 68999999652110 0113456555433 69999999999
Q ss_pred CeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CCC-eEEEEeCCccc
Q psy14896 636 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVP-SYNWTRRGSPL 713 (813)
Q Consensus 636 ~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~p-~i~W~k~g~~l 713 (813)
+|.|.|.|.|..+.... ....|.|...+....+.. ......+.+|+.++|.|.+.|. |++ .|+|+|+|..+
T Consensus 121 ~G~Y~C~~~~~~~~~~~--~~~~l~V~~~~~~P~v~~-----~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 193 (252)
T 3bkj_L 121 LGVYYCFQASLVPLTFG--AGTKLELKRADAAPTVSI-----FPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 193 (252)
T ss_dssp CEEEEEEECSBSSCEEC--CCEEEEECCCCBCCEEEE-----ECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred CEEEEEEEEcCCccEEC--CCEEEEEeCCCcCcEEEE-----eCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeec
Confidence 99999999987653211 124567754221111111 0001223479999999999984 544 79999999988
Q ss_pred CCC-ce---e-e------ecceEEEECCCCCCCCEEEEEEEEcCCCce
Q psy14896 714 PRN-AY---F-E------NFNRILTIPNVKVEDQGEYICRASNDRSAL 750 (813)
Q Consensus 714 ~~~-~~---~-~------~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 750 (813)
..+ .. . . ...+.|.|.++..+|+|.|+|.|.|.....
T Consensus 194 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 194 QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp CSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 665 11 1 0 112469999999999999999999986554
No 351
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.71 E-value=1.8e-17 Score=161.02 Aligned_cols=181 Identities=15% Similarity=0.217 Sum_probs=132.0
Q ss_pred ecccccccCCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcccCCCeEEEee---CccEEEEeecccCCeeEEEEE
Q psy14896 567 FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY---DGALYFSALEQIDAGNYSCNV 643 (813)
Q Consensus 567 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a 643 (813)
++|.+ ..+....+.+|+.++|.|.+ .|.|.+.|.|+|+|.++......++.+.. .++|.|.++..+|+|.|+|.|
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~-~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 95 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEV-FAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTA 95 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEE-EEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEE-eecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEE
Confidence 45555 33344667889999999999 79999999999999875544445665553 356999999999999999999
Q ss_pred EeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEec----CCCCC--eEEEEeCCcccCCCc
Q psy14896 644 QSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF----GYPVP--SYNWTRRGSPLPRNA 717 (813)
Q Consensus 644 ~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~----g~P~p--~i~W~k~g~~l~~~~ 717 (813)
.|..|... ..+.|.|..+|...... .....+..+.|.|... |.|.+ .+.|.+++...-...
T Consensus 96 ~n~~g~~~---~~~~l~v~~~P~~p~~~----------~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~ 162 (215)
T 3mtr_A 96 VNRIGQES---LEFILVQADTPSSPSID----------QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK 162 (215)
T ss_dssp ECSSCEEE---EEEEEEECCCCCCCEEE----------EEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEE
T ss_pred EECCCceE---EEEEEEECCCCCCCcce----------EEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCccccc
Confidence 99998753 34778887766443210 1123567899999742 33443 488998886532222
Q ss_pred eee----ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCC
Q psy14896 718 YFE----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 762 (813)
Q Consensus 718 ~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 762 (813)
... .....|.|.++...|.|.|+|.|.|.+|....+..+.|..+|
T Consensus 163 ~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p 211 (215)
T 3mtr_A 163 WYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 211 (215)
T ss_dssp EEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred ccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEecc
Confidence 111 112689999999999999999999999988877777777665
No 352
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.71 E-value=6.9e-17 Score=150.78 Aligned_cols=153 Identities=14% Similarity=0.139 Sum_probs=103.5
Q ss_pred ccccEEEEeeec--cCCCCeEEEee--cccccccccccccccCCCccEE-eeCCeEEEcCCccccCCeeEEEEeecCcee
Q psy14896 208 ILNDITLSCYAG--GYPNPSYEWFK--EDYVQDRLVANLIDPLSDKRFT-LSGGNLIINDPRQVEDRGSYHCKASNKFGS 282 (813)
Q Consensus 208 ~g~~v~l~C~~~--g~P~p~v~W~k--~g~~l~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~ 282 (813)
+|++|+|.|... +.|.+.|.|+| ++..|............+.|+. ..+|+|.|.+. +.+|+|.|+|.|.|..|.
T Consensus 13 ~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v-~~~DsG~Y~c~~~n~~g~ 91 (182)
T 1hnf_A 13 LGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHL-KTDDQDIYKVSIYDTKGK 91 (182)
T ss_dssp TTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSC-CGGGCEEEEEEEEETTSC
T ss_pred cCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCC-ChhhCEEEEEEEEeCCCc
Confidence 347899999652 35678999999 8876632211110111234444 45889999996 899999999999998887
Q ss_pred eE-eeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEccCccEEEeeeeec
Q psy14896 283 II-SESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQI 361 (813)
Q Consensus 283 ~~-s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 361 (813)
.. +..+.|.|..+.. .|........++|.|.+ .+.|.+.+.|++||.++ . .....|.+.. ..+
T Consensus 92 ~~~~~~~~L~V~~~~~-----~P~i~~~~~~v~L~C~~-~~~p~~~~~W~~~g~~l--~-------~~~~~i~~~~-~~~ 155 (182)
T 1hnf_A 92 NVLEKIFDLKIQERVS-----KPKISWTCINTTLTCEV-MNGTDPELNLYQDGKHL--K-------LSQRVITHKW-TTS 155 (182)
T ss_dssp EEEEEEEEEEEECCCC-----CCEEEEETTTTEEEEEC-SSCSSCEEEEEESSCEE--E-------EESSCEEEEC-CSC
T ss_pred eeEEEEEEEEEcCcCC-----CCEEEEccCcEEEEeEc-cCCCCCEEEEEECCEEC--C-------CCCcEEEEec-ccC
Confidence 53 3566777754311 12222233478999996 56679999999999874 1 1223444433 578
Q ss_pred CCeeeEEEEeeecccc
Q psy14896 362 DAGNYSCNVQSKVSDT 377 (813)
Q Consensus 362 D~G~Y~C~a~n~~g~~ 377 (813)
|+|.|+|.|.|..+..
T Consensus 156 d~G~Y~C~a~N~~~~~ 171 (182)
T 1hnf_A 156 LSAKFKCTAGNKVSKE 171 (182)
T ss_dssp EEEEEEEEEECSSCEE
T ss_pred CCcEEEEEEEeCCCCc
Confidence 9999999999998753
No 353
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.71 E-value=9.4e-18 Score=161.21 Aligned_cols=165 Identities=13% Similarity=0.101 Sum_probs=106.1
Q ss_pred cccEEEEeeec----cCCCCeEEEeecccccccccccc--cccCCCccEEe---eCCeEEEcCCccccCCeeEEEEeecC
Q psy14896 209 LNDITLSCYAG----GYPNPSYEWFKEDYVQDRLVANL--IDPLSDKRFTL---SGGNLIINDPRQVEDRGSYHCKASNK 279 (813)
Q Consensus 209 g~~v~l~C~~~----g~P~p~v~W~k~g~~l~~~~~~~--~~~~~~~~~~~---~~~~l~i~~~~~~~d~G~Y~C~a~n~ 279 (813)
|++++|.|.+. +.|.+.+.|+|++..+....... .......+..+ .+++|.|.+. +.+|+|.|+|.|.|.
T Consensus 9 G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v-~~~D~G~Y~C~~~~~ 87 (201)
T 1dr9_A 9 KEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILAL-RPSDEGTYECVVLKY 87 (201)
T ss_dssp TSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSC-CGGGCEEEEEEEEEC
T ss_pred CCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecc-cchhCeEEEEEEEcC
Confidence 47799999995 45778999999997652111000 00011122222 2467888885 899999999999997
Q ss_pred ceeeE----eeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEccC-ccEE
Q psy14896 280 FGSII----SESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALY 354 (813)
Q Consensus 280 ~g~~~----s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~-~~L~ 354 (813)
.|... ...+.|.|..++..+.. .......|+.++|.|.+..|.|.|.|+|+|||.++.. ...++....+ +.+.
T Consensus 88 ~g~~~~~~~~~~~~l~V~~~~~~p~~-~~~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~-~~~~~~~~~~~~~~~ 165 (201)
T 1dr9_A 88 EKDAFKREHLAEVTLSVKADFPTPSI-SDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNA-INTTVSQDPETELYA 165 (201)
T ss_dssp CTTSCEEEEEEEEEEEEECCCCCCEE-EEEECSSTTEEEEEEEEEEESSCEEEEEEESSCEECC-SEEEEEECTTTCCEE
T ss_pred CCCccccccccEEEEEEcCCCCCCce-EeccCCCCCeEEEEEecCCccCCCEEEEEECCEECcc-ccceEEecCCCcEEE
Confidence 76543 24566666543211000 0011134667799999756899999999999987532 2334444444 3322
Q ss_pred ---EeeeeecCCeeeEEEEeeeccc
Q psy14896 355 ---FSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 355 ---i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
+..+..+|.|.|+|.|.|..|.
T Consensus 166 ~~~~~~v~~~d~g~Y~C~a~n~~~~ 190 (201)
T 1dr9_A 166 VSSKLDFNMTTNHSFMCLIKYGHLR 190 (201)
T ss_dssp EEEEEEEETTSCEEEEEEEEETTCC
T ss_pred EEEEEEEEecCCCEEEEEEecCcce
Confidence 3456678999999999998874
No 354
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.71 E-value=5.9e-17 Score=160.55 Aligned_cols=166 Identities=17% Similarity=0.188 Sum_probs=112.4
Q ss_pred CCCceeccCCCceEEeCCCCCCC----ccEEEEccCC--CCCc--c--------cCCCeEEEeeCc---cEEEEeecccC
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYP----GVNYYWARDY--FPNF--V--------EEDKRVFVSYDG---ALYFSALEQID 635 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p----~~~v~W~k~~--~~~~--~--------~~~~~~~~~~~~---~L~i~~~~~~d 635 (813)
+....+.+|+.++|.|.+ .+.| .+.|.|+|++ .... . ....|+.+..++ +|+|.+++.+|
T Consensus 8 p~~~~v~~G~~v~L~C~~-~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 86 (240)
T 1moe_A 8 PASLAVSLGQRATMSCRA-GESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADD 86 (240)
T ss_dssp CSEEEECTTSCEEEEEEE-SSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CCeEEecCCCCEEEEEeC-CCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhh
Confidence 344567889999999999 6777 7899999963 2110 0 113456555433 69999999999
Q ss_pred CeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCC--CeEEEEeC--Cc
Q psy14896 636 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV--PSYNWTRR--GS 711 (813)
Q Consensus 636 ~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~--p~i~W~k~--g~ 711 (813)
+|.|+|.|.|..+... .....|.|..++..... +.....+....+.+|++++|.|.+.|.|. +.|+|+|+ |.
T Consensus 87 ~G~Y~C~~~n~~~~~~--~~~~~l~V~~~~~~~~~--~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~ 162 (240)
T 1moe_A 87 VATYYCQQTNEDPYTF--GGGTKLEIKGGGSGGGG--EVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQ 162 (240)
T ss_dssp CEEEEEEECSSSSCCB--CCCEEEEECCCSCCCCC--CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTS
T ss_pred CEEEEEEEccCCceee--cCCEEEEEecCCCCCCc--eEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCC
Confidence 9999999999865321 22356777765421000 00001122356889999999999999884 59999996 33
Q ss_pred ccC--------C---------Cceee------ecceEEEECCCCCCCCEEEEEEEEc
Q psy14896 712 PLP--------R---------NAYFE------NFNRILTIPNVKVEDQGEYICRASN 745 (813)
Q Consensus 712 ~l~--------~---------~~~~~------~~~~~L~i~~v~~~d~G~Y~C~a~N 745 (813)
.+. . ..++. ....+|+|.+++.+|+|.|+|.|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 163 GLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp CCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred CcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 321 0 11221 1235799999999999999999985
No 355
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.71 E-value=5.6e-18 Score=163.34 Aligned_cols=178 Identities=12% Similarity=0.204 Sum_probs=109.3
Q ss_pred ceeeCCCcee-ecCCCccccccEEEEeeeccCC---C-CeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcc
Q psy14896 191 YFIKQPTDVV-FDLSKRSILNDITLSCYAGGYP---N-PSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQ 265 (813)
Q Consensus 191 ~~~~~p~~~~-v~~g~~~~g~~v~l~C~~~g~P---~-p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 265 (813)
+++..|.... +.+| ++++|.|.+.|.| . +.|.|||++..+............+.++. ..++|.|.+ ++
T Consensus 4 v~~~~P~~~~~v~~G-----~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~-~~~~L~I~~-~~ 76 (207)
T 2vol_A 4 VFIFPPKPKDVLTIT-----LTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFR-SVSELPIMH-QD 76 (207)
T ss_dssp EEEECCCHHHHHSTT-----SCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEE-EEEEEECCH-HH
T ss_pred EEEeCcChhhhhccC-----CceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEE-EEEEEEEeh-hH
Confidence 3444455433 5455 7799999998874 2 49999999976532110000000112221 124577765 48
Q ss_pred ccCCeeEEEEeecCceee-EeeeeEE--eeeeecccccCCCCceeecCCCeEEEecCCCCCCc-ceEEEeeccccccccC
Q psy14896 266 VEDRGSYHCKASNKFGSI-ISESVQL--AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEE 341 (813)
Q Consensus 266 ~~d~G~Y~C~a~n~~g~~-~s~~~~l--~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~v~W~k~~~~~~~~~ 341 (813)
.+|+|.|+|.|.|..+.. ....+.+ .+..+|.+.+.........|+.++|.|.+.+..|. ++++|+|||+++....
T Consensus 77 ~~D~G~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~ 156 (207)
T 2vol_A 77 WLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYK 156 (207)
T ss_dssp HHTTCCEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEE
T ss_pred cCCCCEEEEEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcc
Confidence 999999999999988753 1233433 34445555444433333357888999997554566 5999999998753222
Q ss_pred CccEEEccCccEE------EeeeeecCCeeeEEEEeeecc
Q psy14896 342 DKRVFVSYDGALY------FSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 342 ~~~~~~~~~~~L~------i~~v~~~D~G~Y~C~a~n~~g 375 (813)
..+.....+|++. |.....+|.|.|+|.|.|...
T Consensus 157 ~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 157 NTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp ECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred cCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 2233345566544 444444579999999998764
No 356
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.71 E-value=1.3e-17 Score=163.35 Aligned_cols=180 Identities=14% Similarity=0.182 Sum_probs=116.2
Q ss_pred CceeccCCCceEEeCCCCCCC--ccEEEEccCCC--CCc-c---c-----------CCCeEEEee-----CccEEEEeec
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYP--GVNYYWARDYF--PNF-V---E-----------EDKRVFVSY-----DGALYFSALE 632 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~~--~~~-~---~-----------~~~~~~~~~-----~~~L~i~~~~ 632 (813)
+..+.+|++++|.|.+ .+.+ .+.|.|+|++. ... + . ...|+.+.. +.+|+|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (227)
T 1mju_H 9 AELVKPGASVKLSCKA-SGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLT 87 (227)
T ss_dssp EEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CeEEcCCCCEEEEEEe-cCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCC
Confidence 4567889999999998 5665 68899999642 210 0 0 134666653 2469999999
Q ss_pred ccCCeeEEEEEEeeecCccccCceeeEEEccCC-CccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CCC-eEEEEeC
Q psy14896 633 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVP-SYNWTRR 709 (813)
Q Consensus 633 ~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p-~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~p-~i~W~k~ 709 (813)
.+|+|.|.|.+.|..+... .....|.|...+ ....+... .+ ...+.+|+.++|.|.+.|. |.| .|+|+|+
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~--~~~~~L~V~~~~~~~P~v~~~---~~--~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 160 (227)
T 1mju_H 88 SDDSAVYYCANKLGWFPYW--GQGTLVTVSAAKTTAPSVYPL---AP--VCGDTSGSSVTLGCLVKGYFPEPVTLTWNSG 160 (227)
T ss_dssp GGGCEEEEEEEEETTEEEE--CCCEEEEECSSCCBCCEEEEE---CC--CC------CEEEEEEEEEEBSSCCEEEEGGG
T ss_pred cccCEEEEEEECCCCceEE--cCcEEEEEcCCCCCCCEEEEe---cC--CccccCCCcEEEEEEeecEeCCCeEEEEecC
Confidence 9999999999998532111 112467776521 11111100 00 1245689999999999986 777 9999999
Q ss_pred CcccCCC---ceee----ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCccc
Q psy14896 710 GSPLPRN---AYFE----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFT 765 (813)
Q Consensus 710 g~~l~~~---~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~~ 765 (813)
|..+... .... ...+.|.|..+..+| |.|+|.|.|..+.....+.|.+..||.-+
T Consensus 161 g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p~~~ 222 (227)
T 1mju_H 161 SLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKP 222 (227)
T ss_dssp TBCTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC----
T ss_pred CCcCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCCCCC
Confidence 9875311 0111 124579999999988 99999999988887777888777776543
No 357
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.71 E-value=9.9e-16 Score=177.87 Aligned_cols=434 Identities=10% Similarity=-0.002 Sum_probs=232.5
Q ss_pred ccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccCCeeEEEEeecCceeeEeeeeE
Q psy14896 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQ 289 (813)
Q Consensus 210 ~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~ 289 (813)
.++.|.|.+.|.|.|.+.|.|+|..+.. ...+.+.|......+..+.|.|.+.|..|......+.
T Consensus 92 g~l~v~c~~~g~P~p~i~W~k~g~~~~~---------------~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~ 156 (731)
T 2v5y_A 92 GLLNVYVKVNNGPLGNPIWNISGDPTRT---------------WNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVK 156 (731)
T ss_dssp EEEEEEEEETTCCCCSEEEEECCCCCSS---------------CEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBE
T ss_pred ceEEEEEecCCCCccceeEEEeCCcCCc---------------eeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEE
Confidence 5799999999999999999999975411 1122344443212334589999998988876555554
Q ss_pred Eeee---eecccccCCCCceeecCCCeEEEecCCCCCCcceEE-Ee--eccccccccCCccEEEcc---CccEEEeeeee
Q psy14896 290 LAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYY-WA--RDYFPNFVEEDKRVFVSY---DGALYFSALEQ 360 (813)
Q Consensus 290 l~v~---~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~-W~--k~~~~~~~~~~~~~~~~~---~~~L~i~~v~~ 360 (813)
+.+. .+|.+. .+....+.+|+.++|.|.+ .|.|.+.+. |+ +||+++... ....+.. .++|.|.++..
T Consensus 157 ~~~~~~~~~p~~~-~~~~~~v~~G~~v~l~C~~-~g~P~p~i~~W~~~~~g~~l~~~--~~~~~~~~~~~~~l~I~~~~~ 232 (731)
T 2v5y_A 157 VLGHPCTRTPHFL-RIQNVEVNAGQFATFQCSA-IGRTVAGDRLWLQGIDVRDAPLK--EIKVTSSRRFIASFNVVNTTK 232 (731)
T ss_dssp EESSCCSSSCEEC-CCCCEEEETTSCEEEEEEE-ESCCCTTCEEEEEESSSCCEEEE--EEEECCSSEEEEEEEECSCCT
T ss_pred eeecccccccccc-cccceEEeCCCcEEEEEEe-CCCCCCceeEEEecCCCcccccc--ceEEeccccceEEEEEccccc
Confidence 4432 233343 4556788899999999995 788999988 88 778764322 1222222 25899999999
Q ss_pred cCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeecCCCeeeEeecCCcC
Q psy14896 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL 440 (813)
Q Consensus 361 ~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~~~~l 440 (813)
.|+|.|+|.|.|..|... +..+.|.|..+|.+.. .|. ........+.|.|.....+ .+.++
T Consensus 233 ~d~g~Y~c~A~n~~G~~~--s~~~~l~V~~~P~~~~--~p~-------~~~~~~~~v~l~w~~~~~~--------g~~~i 293 (731)
T 2v5y_A 233 RDAGKYRCMIRTEGGVGI--SNYAELVVKEPPVPIA--PPQ-------LASVGATYLWIQLNANSIN--------GDGPI 293 (731)
T ss_dssp TTCEEEEEEEEETTEEEE--CCCEEEEEECCCCBSS--CCE-------EEEECSSCEEEECCCSSBS--------SCSCC
T ss_pred ccCeEEEEEEECCCCCcc--eeeEEEEEecCCCCCC--Ccc-------eeccCCceEEEEeCCcccC--------CCCcc
Confidence 999999999999988521 2336788876543111 000 0011123344443321100 00000
Q ss_pred CCCceeccccceEEEcccccccceEEeCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCC
Q psy14896 441 PRNAYFENFNRILTIPNVKMRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 520 (813)
Q Consensus 441 ~~~~~~~~~~~~l~i~~~~~~g~y~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~ 520 (813)
. .-.|.|.+.+...
T Consensus 294 ~------------------------------------------------------~Y~v~~~~~~~~~------------ 307 (731)
T 2v5y_A 294 V------------------------------------------------------AREVEYCTASGSW------------ 307 (731)
T ss_dssp C------------------------------------------------------EEEEEEEESSSSC------------
T ss_pred E------------------------------------------------------EEEEEEEECCCCc------------
Confidence 0 0012333222100
Q ss_pred CceEEeeCCeEEEeCCCCCCCCceEEEEEE--cCceeEE-eecEEEEEeecccccccCCC-ceeccCCCceEEeCCCCCC
Q psy14896 521 DKRFTLSGGNLIINDPRQVEDRGSYHCKAS--NKFGSII-SESVQLAFGFIGEFNLKRAP-EIGNQNWGKAMFCDPPTNY 596 (813)
Q Consensus 521 ~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~--n~~g~~~-s~~~~l~v~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~ 596 (813)
.........++.|.+. ...+...|+|.|. |..|... +..+.+..........+... ........++|.+..+...
T Consensus 308 ~~~~~~~~~~~~i~~L-~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~ 386 (731)
T 2v5y_A 308 NDRQPVDSTSYKIGHL-DPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYN 386 (731)
T ss_dssp EEEEECCSSEEEECSC-CTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHH
T ss_pred eEEeccCcceEEEeCC-CCCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEEEeccCCeEEEEEECCCcc
Confidence 0011123457888886 7778888889999 9988753 22222222111000000011 1122345677888763110
Q ss_pred ----C--ccEEEEccCCCCCcccCCCeE-EEe---eCccEEEEeecccCCeeEEEEEEeeecCccccCceeeEEEccCCC
Q psy14896 597 ----P--GVNYYWARDYFPNFVEEDKRV-FVS---YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 666 (813)
Q Consensus 597 ----p--~~~v~W~k~~~~~~~~~~~~~-~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~ 666 (813)
+ .-.|.|...+... ....+. .+. ....+.|.++.+.....|++.|.|..|... + ..+.+.....
T Consensus 387 ~~~~~~~~y~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S---~~~~~~T~~~ 460 (731)
T 2v5y_A 387 VTRCHSYNLTVHYCYQVGGQ--EQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-S---QELIVQTDED 460 (731)
T ss_dssp HHCSSSCEEEEEEEEESSSS--EEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-C---CCEEEECCCC
T ss_pred cccceeeeEEEEEEEccCCC--CccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-C---ceEEEEccCC
Confidence 0 1235554432110 000000 111 122488999999999999999999998742 2 2233332221
Q ss_pred ccccccCCCCCCCCCcCCC-CCCeEEEEEEecCCCCC-----eEEEEeCCcc---cC--CCc---eeeecceEEEECCCC
Q psy14896 667 FQQLKFPNNFPKTFPEAPK-AGDKVRLECVAFGYPVP-----SYNWTRRGSP---LP--RNA---YFENFNRILTIPNVK 732 (813)
Q Consensus 667 ~~~~~~p~~~~~~~~~~~~-~G~~v~l~C~~~g~P~p-----~i~W~k~g~~---l~--~~~---~~~~~~~~L~i~~v~ 732 (813)
. |.. ++.....+. ....+.|.-..-..+.- .|.|...+.. .. ... ........++|.++.
T Consensus 461 ~-----P~~-p~~~~~~~~~~~~si~l~W~~P~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~ 534 (731)
T 2v5y_A 461 L-----PGA-VPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLY 534 (731)
T ss_dssp C-----CCC-CCTTTCEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEEEECC---CCCCCEEEEEEETTCCEEEECSCC
T ss_pred C-----CCC-CCcceEEeeecCCeEEEEEcCCCCCCCCccceEEEEEECcCCCccccccCcceEEeecCCcceEEecCCC
Confidence 1 111 000011111 24566666654322111 3444433211 00 000 112234578999999
Q ss_pred CCCCEEEEEEEEcCCCceEEEEEEEEEcC
Q psy14896 733 VEDQGEYICRASNDRSALESSVTISIQAE 761 (813)
Q Consensus 733 ~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 761 (813)
..-...|+..|.|..|....+ .+.+.-+
T Consensus 535 p~t~Y~~~V~A~n~~G~g~~s-~~~~~T~ 562 (731)
T 2v5y_A 535 PGTTYSFTIRASTAKGFGPPA-TNQFTTK 562 (731)
T ss_dssp TTEEEEEEEEEEETTEEEEEE-EEEEECC
T ss_pred CCCEEEEEEEEEeCCccCCCc-ccEEEcC
Confidence 988899999999998865554 3445433
No 358
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.71 E-value=1.8e-17 Score=160.41 Aligned_cols=168 Identities=15% Similarity=0.216 Sum_probs=113.3
Q ss_pred CCceeccCCCceEEeCCCCCCC--ccEEEEccCC--CCCc--c------------cCCCeEEEeeC-----ccEEEEeec
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYP--GVNYYWARDY--FPNF--V------------EEDKRVFVSYD-----GALYFSALE 632 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~--~~~~--~------------~~~~~~~~~~~-----~~L~i~~~~ 632 (813)
.+..+.+|+.++|.|.+ .+.| .+.|.|+|++ .... . ....|+.+..+ .+|+|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 8 GPSLVKPSQTLSLTCSV-TGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp SCSEECTTSCEEEEEEE-ESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCEEecCCCcEEEEEEE-ecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 34567889999999998 5654 4899999863 2110 0 11356665532 279999999
Q ss_pred ccCCeeEEEEEEeeecCccccCceeeEEEccCC-CccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CCC-eEEEEeC
Q psy14896 633 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVP-SYNWTRR 709 (813)
Q Consensus 633 ~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p-~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~p-~i~W~k~ 709 (813)
.+|+|.|.|.|.|.. . ......|.|...+ ....+.. ......+.+|+.++|.|.+.|. |.| .|+|+|+
T Consensus 87 ~~D~G~Y~C~~~~~~-~---~~~~~~l~V~~~~~~~P~v~~-----~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 157 (210)
T 3d9a_H 87 TEDTATYYCANWDGD-Y---WGQGTLVTVSAAKTTPPSVYP-----LAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG 157 (210)
T ss_dssp GGGCEEEEEEETTSS-C---BCCCEEEEECCCCCBCCEEEE-----ECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred cccCEEEEEEEecCc-c---cccceEEEeccCCCCCCEEEE-----ecCCcccccCCcEEEEEEEeeEecCCcEEEEeeC
Confidence 999999999999863 1 1112467776321 1111110 0111346789999999999987 888 9999999
Q ss_pred CcccCCCc--ee-e----ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEE
Q psy14896 710 GSPLPRNA--YF-E----NFNRILTIPNVKVEDQGEYICRASNDRSALESSV 754 (813)
Q Consensus 710 g~~l~~~~--~~-~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~ 754 (813)
|..+.... .. . ...+.|.|..+..+| |.|+|.|.|..|......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 208 (210)
T 3d9a_H 158 SLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 208 (210)
T ss_dssp TBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEEE
T ss_pred CcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccccc
Confidence 98653111 11 1 123569999998877 999999999998765443
No 359
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.71 E-value=1.4e-17 Score=161.62 Aligned_cols=175 Identities=18% Similarity=0.214 Sum_probs=112.3
Q ss_pred CCceeecCCCccccccEEEEeeeccCCCCeEEEeecc--cccccccc--cccccCCCccEEee--C--CeEEEcCCcccc
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED--YVQDRLVA--NLIDPLSDKRFTLS--G--GNLIINDPRQVE 267 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g--~~l~~~~~--~~~~~~~~~~~~~~--~--~~l~i~~~~~~~ 267 (813)
|..+.+.+| ++++|.|.+.+.|.+.|.|||++ ..+..... .........++... . .+|.|.+. +.+
T Consensus 6 p~~~~v~~G-----~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v-~~~ 79 (212)
T 1nfd_E 6 PSSASVTVG-----ETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGA-QPE 79 (212)
T ss_dssp CSEEEEETT-----SCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTC-CGG
T ss_pred CCeEEEeCC-----CcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcC-Ccc
Confidence 677777777 67999999999888899999964 32210000 00001113445433 2 36888875 899
Q ss_pred CCeeEEEEeecC--ceeeEeeeeEEeee----eecccccCCCCceeecCCCeEEEecCCCCCCc-ceEEEeecccccccc
Q psy14896 268 DRGSYHCKASNK--FGSIISESVQLAFG----FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVE 340 (813)
Q Consensus 268 d~G~Y~C~a~n~--~g~~~s~~~~l~v~----~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~v~W~k~~~~~~~~ 340 (813)
|+|.|+|.|.|. .....+..+.|.|. .+|.+.+........+|+.++|.|.+.+..|. +.++|+|||+++...
T Consensus 80 D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~ 159 (212)
T 1nfd_E 80 DEAAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDG 159 (212)
T ss_dssp GCSEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSS
T ss_pred cCEEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCC
Confidence 999999999962 22222344556663 23334443344445578888999997544465 899999999875322
Q ss_pred CCc-cEE-----EccCccEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 341 EDK-RVF-----VSYDGALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 341 ~~~-~~~-----~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
... ... ....+.|.|.++..+|+|.|+|.|.|..+.
T Consensus 160 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 160 VKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp CBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred eecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 110 000 011246999999999999999999998653
No 360
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.71 E-value=3.1e-17 Score=159.56 Aligned_cols=174 Identities=18% Similarity=0.197 Sum_probs=110.2
Q ss_pred CCceeecCCCccccccEEEEeee-ccCC-CCeEEEeeccc--ccccccc--cccccCCCccEEee----CCeEEEcCCcc
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYA-GGYP-NPSYEWFKEDY--VQDRLVA--NLIDPLSDKRFTLS----GGNLIINDPRQ 265 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~-~g~P-~p~v~W~k~g~--~l~~~~~--~~~~~~~~~~~~~~----~~~l~i~~~~~ 265 (813)
|..+.+.+| ++++|.|.+ .+.| .+.|.|||++. .+..... .........++... +.+|.|.+. +
T Consensus 7 p~~~~v~~G-----~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v-~ 80 (216)
T 2xzc_L 7 PPSVSAAPG-----QKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGL-Q 80 (216)
T ss_dssp CSEEEECTT-----CCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSC-C
T ss_pred CCcEEecCC-----CeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCC-C
Confidence 666777676 779999995 5543 67999999652 2110000 00001123355443 226888885 8
Q ss_pred ccCCeeEEEEeecCce-eeEeeeeEEeeee---ecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEEeecccccccc
Q psy14896 266 VEDRGSYHCKASNKFG-SIISESVQLAFGF---IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPNFVE 340 (813)
Q Consensus 266 ~~d~G~Y~C~a~n~~g-~~~s~~~~l~v~~---~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~k~~~~~~~~ 340 (813)
.+|+|.|+|.|.|..+ ...+..+.|.|.. +|.+.+.........|+.++|.|.+.++.|.+ +|+|+|||+++...
T Consensus 81 ~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~ 160 (216)
T 2xzc_L 81 TGDEADYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN 160 (216)
T ss_dssp GGGCEEEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSS
T ss_pred cccCEEEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCC
Confidence 9999999999999876 3334455666643 23333323333334577889999975546664 99999999875322
Q ss_pred --CCccEEEccCc------cEEEeeeeecCCeeeEEEEeeecc
Q psy14896 341 --EDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 341 --~~~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g 375 (813)
.........++ .|.|..+..+|+|.|+|.|.|...
T Consensus 161 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 203 (216)
T 2xzc_L 161 SQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGL 203 (216)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTC
T ss_pred eeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCC
Confidence 00111112223 588999999999999999998764
No 361
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.71 E-value=2.3e-16 Score=157.48 Aligned_cols=193 Identities=15% Similarity=0.153 Sum_probs=123.5
Q ss_pred eeeCCCceeecCCCccccccEEEEeeeccCC--CCeEEEeec--ccccccccc-------cccccCCCccEEee-C----
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKE--DYVQDRLVA-------NLIDPLSDKRFTLS-G---- 255 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~--g~~l~~~~~-------~~~~~~~~~~~~~~-~---- 255 (813)
++..|..+.+.+| ++|+|.|.+.|.+ .+.|.|||. +..+..... .........++... +
T Consensus 4 ~~~~p~~~~v~~G-----~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 78 (253)
T 3uzq_A 4 LLEQSGAELVKPG-----ASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSN 78 (253)
T ss_dssp CEEECCCEEECTT-----CCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTT
T ss_pred eEecCCCeeecCC-----CcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCC
Confidence 4455667777776 7799999998854 789999993 222211100 00111122344433 1
Q ss_pred -CeEEEcCCccccCCeeEEEEeecCceeeEeeeeEEeeeee---------------cccccCCCCceeecCCCeEEEecC
Q psy14896 256 -GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFI---------------GEFNLKRAPEIGNQNWGKAMFCDP 319 (813)
Q Consensus 256 -~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~---------------~~~~~~~~~~~~~~~~~~~l~C~~ 319 (813)
.+|.|.+. +.+|+|.|+|.|.|..+...+..+.|.|... +.+...+....+.+|+.++|.|.+
T Consensus 79 ~~~L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~ 157 (253)
T 3uzq_A 79 TAYLHLSSL-TSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRA 157 (253)
T ss_dssp EEEEEECSC-CGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEE
T ss_pred eEEEEeCCC-CcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEe
Confidence 13888885 8999999999999977665455667777642 223333445678899999999996
Q ss_pred CCCCCcc----eEEEeecc--cccc-c---------cCCccEEEccC---ccEEEeeeeecCCeeeEEEEeeeccccCCC
Q psy14896 320 PTNYPGV----NYYWARDY--FPNF-V---------EEDKRVFVSYD---GALYFSALEQIDAGNYSCNVQSKVSDTGRN 380 (813)
Q Consensus 320 ~~~~p~~----~v~W~k~~--~~~~-~---------~~~~~~~~~~~---~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 380 (813)
.+.|.+ .+.|+|++ .... + ....|+..... .+|.|.+++.+|+|.|+|.|.|..+ ...
T Consensus 158 -~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~--~~f 234 (253)
T 3uzq_A 158 -SENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVP--WTF 234 (253)
T ss_dssp -SSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS--CCB
T ss_pred -cCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCC--cEE
Confidence 456665 99999953 2211 0 11234443332 2699999999999999999998643 233
Q ss_pred CCceeeEEccCCc
Q psy14896 381 GPFFPLKVFPHSN 393 (813)
Q Consensus 381 s~~~~l~v~~~~~ 393 (813)
+....|.|...+.
T Consensus 235 g~gt~l~v~~~~~ 247 (253)
T 3uzq_A 235 GGGTKLEIKRPLE 247 (253)
T ss_dssp CCCEEEEECCC--
T ss_pred CCCEEEEEcCCCC
Confidence 4457788875543
No 362
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.71 E-value=1.1e-16 Score=156.39 Aligned_cols=168 Identities=17% Similarity=0.268 Sum_probs=115.7
Q ss_pred CceeccCCCceEEeCCCCCCC--ccEEEEccCCC--CCc-c--------------cCCCeEEEeeC-----ccEEEEeec
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYP--GVNYYWARDYF--PNF-V--------------EEDKRVFVSYD-----GALYFSALE 632 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~~--~~~-~--------------~~~~~~~~~~~-----~~L~i~~~~ 632 (813)
+..+.+|+.++|.|.+ .+.+ .+.|.|||... ... + ....|+.+..+ .+|+|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (223)
T 1dee_B 9 GGVVQPGKSLRLSCAA-SGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (223)
T ss_dssp CCEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CEEEcCCCcEEEEEEe-cCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC
Confidence 5567889999999998 5554 47899998542 110 0 01346666542 369999999
Q ss_pred ccCCeeEEEEEEeeecC---ccccCceeeEEEcc----CCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CCC-e
Q psy14896 633 QIDAGNYSCNVQSKVSD---TGRNGPFFPLKVFP----HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVP-S 703 (813)
Q Consensus 633 ~~d~G~Y~C~a~n~~g~---~~~~~~~~~l~v~~----~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~p-~ 703 (813)
.+|+|.|.|.+.|..|. .......+.|.|.. +|.+... ++ ...+.+|+.++|.|.+.|. |.| .
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~--~~------~~~~~~g~~v~L~C~~~g~~P~p~~ 159 (223)
T 1dee_B 88 AEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPL--VS------CENSNPSSTVAVGCLAQDFLPDSIT 159 (223)
T ss_dssp GGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEE--EC------TTCCCSSSEEEEEEEEEEEBSSCCE
T ss_pred HHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEe--cC------CcccCCCCcEEEEEEEEEEeCCCeE
Confidence 99999999999987531 00111224677874 2222111 10 1235789999999999987 777 9
Q ss_pred EEEEe-CCcccCCC---------ceeeecceEEEECCCCC--CCCEEEEEEEEcCCCceEEEE
Q psy14896 704 YNWTR-RGSPLPRN---------AYFENFNRILTIPNVKV--EDQGEYICRASNDRSALESSV 754 (813)
Q Consensus 704 i~W~k-~g~~l~~~---------~~~~~~~~~L~i~~v~~--~d~G~Y~C~a~N~~G~~~~~~ 754 (813)
|+|+| ||..|... ..+ ...+.|+|..... +|.|.|+|.|.|..|.....+
T Consensus 160 v~W~~~~g~~l~~~~~~~~~~~~~~~-~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 160 FSWKYKNNSDISSTRGFPSVLRGGKY-AATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp EEEEETTSCBCSCEEECCCEEETTEE-EEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred EEeEccCCCccceeEECCccccCCeE-EEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 99999 99888641 111 1135689988876 889999999999998876654
No 363
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.70 E-value=2.2e-17 Score=164.56 Aligned_cols=184 Identities=18% Similarity=0.227 Sum_probs=112.5
Q ss_pred CCceeecCCCccccccEEEEeeeccCCCCe-----EEEeeccccccccccc-------ccccCCCccEE-----eeCCeE
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYPNPS-----YEWFKEDYVQDRLVAN-------LIDPLSDKRFT-----LSGGNL 258 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~-----v~W~k~g~~l~~~~~~-------~~~~~~~~~~~-----~~~~~l 258 (813)
|....+.+| ++++|.|.+.|.|.+. |.|||++......... ........++. ..+.+|
T Consensus 10 p~~~~v~~G-----~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL 84 (248)
T 3pv7_A 10 GGTQITPLN-----DNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASL 84 (248)
T ss_dssp TSEEEEETT-----SCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCE
T ss_pred CCCeEEeCC-----CCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEE
Confidence 445566666 7799999999888776 9999986432110000 00000011111 013358
Q ss_pred EEcCCccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEEeeccccc
Q psy14896 259 IINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPN 337 (813)
Q Consensus 259 ~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~k~~~~~ 337 (813)
.|.+. +.+|+|.|+|.|.|..+.. +..+.|.|..+|.+.+... .....+..++|.|.+..+.|.+ .++|+|||+++
T Consensus 85 ~I~~v-~~~D~G~Y~C~~~~~~~~~-~~~~~L~V~~~P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l 161 (248)
T 3pv7_A 85 RLPGI-QLEEAGEYRCEVVVTPLKA-QGTVQLEVVASPASRLLLD-QVGMKENEDKYMCESSGFYPEAINITWEKQTQKF 161 (248)
T ss_dssp EESSC-CGGGCEEEEEEEEETTEEE-EEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSS
T ss_pred EeCCC-CHHHCeEEEEEEEeCCccc-eeEEEEEEecCCceEEecC-CccccCCCcEEEEEEccEECCCeEEEEEECCccC
Confidence 88885 8999999999999988865 6678888887776655443 3344567788999975548988 99999999764
Q ss_pred ccc----CC---ccEEEccCc------cEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEE
Q psy14896 338 FVE----ED---KRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388 (813)
Q Consensus 338 ~~~----~~---~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v 388 (813)
... .. .......++ .|.|.....+|.|.|+|.|.|..+.. ..+..+.|.|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~-~~~~~v~l~V 224 (248)
T 3pv7_A 162 PHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHT-PLRSNFTLTA 224 (248)
T ss_dssp CSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSS-CEEEEECC--
T ss_pred CCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCC-CcEEEEEEEE
Confidence 211 00 112222333 57788888899999999999987752 2223345555
No 364
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.70 E-value=2.1e-16 Score=158.19 Aligned_cols=179 Identities=13% Similarity=0.146 Sum_probs=118.3
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeecc--CCCCeEEEeecc--cccccccc-------cccccCCCccEEee---
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGG--YPNPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS--- 254 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g--~P~p~v~W~k~g--~~l~~~~~-------~~~~~~~~~~~~~~--- 254 (813)
+|.|...+..+.+.+| ++|+|.|.+.+ .|.+.+.|||.. ..+..... .........|+.+.
T Consensus 6 ~~~~~~~~~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~ 80 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPG-----ASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADT 80 (256)
T ss_dssp -CCEEEECCCEEECTT-----CCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEET
T ss_pred ceEEEEecCCceecCC-----CeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEec
Confidence 5778888899998887 67999999987 377899999853 21110000 01112223455554
Q ss_pred -C--CeEEEcCCccccCCeeEEEEeecC-----------ceeeEeeeeEEeeeee---------------cccccCCCCc
Q psy14896 255 -G--GNLIINDPRQVEDRGSYHCKASNK-----------FGSIISESVQLAFGFI---------------GEFNLKRAPE 305 (813)
Q Consensus 255 -~--~~l~i~~~~~~~d~G~Y~C~a~n~-----------~g~~~s~~~~l~v~~~---------------~~~~~~~~~~ 305 (813)
. .+|.|.+. +.+|+|.|.|.|.|. ........+.|.|... +.+...+...
T Consensus 81 ~~~~~~L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (256)
T 3juy_B 81 SANTAYMELRSL-RSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTL 159 (256)
T ss_dssp TTTEEEEEECSC-CGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEE
T ss_pred CCCEEEEEECCC-CcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeE
Confidence 1 24888885 899999999999986 1222244566776553 2233335556
Q ss_pred eeecCCCeEEEecCCCCCCc-ceEEEeec--cccccc----------cCCccEEEccCc---cEEEeeeeecCCeeeEEE
Q psy14896 306 IGNQNWGKAMFCDPPTNYPG-VNYYWARD--YFPNFV----------EEDKRVFVSYDG---ALYFSALEQIDAGNYSCN 369 (813)
Q Consensus 306 ~~~~~~~~~l~C~~~~~~p~-~~v~W~k~--~~~~~~----------~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~ 369 (813)
.+.+|+.++|.|.+. +.|. +.+.|+|. +..... ....|+.+..++ +|.|.+++.+|+|.|+|.
T Consensus 160 ~v~~G~~v~L~C~~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 238 (256)
T 3juy_B 160 SLSPGERATFSCRSS-HSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQ 238 (256)
T ss_dssp EECTTSCEEEEEEES-SCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred EEeCCCCEEEEEEEC-CCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEE
Confidence 778899999999974 4555 89999984 332211 023444443333 599999999999999999
Q ss_pred Eeeec
Q psy14896 370 VQSKV 374 (813)
Q Consensus 370 a~n~~ 374 (813)
|.|..
T Consensus 239 ~~~~~ 243 (256)
T 3juy_B 239 VYGAS 243 (256)
T ss_dssp ECCSS
T ss_pred EeeCC
Confidence 99853
No 365
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.70 E-value=1.3e-17 Score=140.39 Aligned_cols=82 Identities=24% Similarity=0.504 Sum_probs=72.5
Q ss_pred CcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceee----ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEE
Q psy14896 681 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 756 (813)
Q Consensus 681 ~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 756 (813)
+..+.+|++++|.|.+.|.|.|.|+|+|||..|..+.++. ....+|.|.+++.+|+|.|+|+|.|.+|..++++.|
T Consensus 22 ~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 101 (107)
T 3knb_B 22 PVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAV 101 (107)
T ss_dssp CEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred cEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEE
Confidence 3678899999999999999999999999999998776543 234589999999999999999999999999999999
Q ss_pred EEEcCC
Q psy14896 757 SIQAEP 762 (813)
Q Consensus 757 ~V~~~P 762 (813)
.|..+|
T Consensus 102 ~V~~pP 107 (107)
T 3knb_B 102 TVLEPP 107 (107)
T ss_dssp EEEC--
T ss_pred EEEcCC
Confidence 999887
No 366
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.70 E-value=3.5e-17 Score=158.56 Aligned_cols=176 Identities=19% Similarity=0.232 Sum_probs=115.9
Q ss_pred eeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeec--ccccccccc--cccccCCCccEEee----CCeEEEcCC
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE--DYVQDRLVA--NLIDPLSDKRFTLS----GGNLIINDP 263 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~--g~~l~~~~~--~~~~~~~~~~~~~~----~~~l~i~~~ 263 (813)
++..| .+.+.+| ++++|.|.+. |.+.|.|||+ +..+..... .........++... +.+|.|.+.
T Consensus 4 v~~~~-~~~v~~G-----~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 75 (211)
T 3tv3_L 4 LTQPP-SASGSPG-----QSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGL 75 (211)
T ss_dssp CBCCS-EEEECTT-----CEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESC
T ss_pred EEeCc-eEEEcCC-----CCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCC
Confidence 33344 6677666 7799999998 8899999995 322210000 00001122344432 346888885
Q ss_pred ccccCCeeEEEEeecCce-eeEeeeeEEeee----eecccccCCCCceeecCCCeEEEecCCCCCC-cceEEEeeccccc
Q psy14896 264 RQVEDRGSYHCKASNKFG-SIISESVQLAFG----FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP-GVNYYWARDYFPN 337 (813)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g-~~~s~~~~l~v~----~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p-~~~v~W~k~~~~~ 337 (813)
+.+|+|.|+|.|.|..| ...+..+.|.|. .+|.+.+.........|+.++|.|.+.+..| .+.++|+|||.++
T Consensus 76 -~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l 154 (211)
T 3tv3_L 76 -QTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPV 154 (211)
T ss_dssp -CGGGCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred -ChhHCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeec
Confidence 89999999999999887 344666777776 3444544444445557899999999754333 5899999999875
Q ss_pred ccc-CCccEEEccC------ccEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 338 FVE-EDKRVFVSYD------GALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 338 ~~~-~~~~~~~~~~------~~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
... .........+ ..|.|..+..+|+|.|+|.|.|..+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~ 200 (211)
T 3tv3_L 155 KAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST 200 (211)
T ss_dssp CTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEE
T ss_pred CCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCC
Confidence 321 0111112222 25889999999999999999997753
No 367
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.70 E-value=2.6e-16 Score=156.59 Aligned_cols=166 Identities=19% Similarity=0.196 Sum_probs=112.4
Q ss_pred ccccCeEEEEEeeccC--CCcEEEeecc--ccccceecc-------ccCCCCCceEEeeC------CeEEEeCCCCCCCC
Q psy14896 480 SILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVAN-------LIDPLSDKRFTLSG------GNLIINDPRQVEDR 542 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p--~~~v~W~k~~--~~~~~~~~~-------~~~~~~~~~~~~~~------~~l~i~~~~~~~d~ 542 (813)
.+|+.++|.|.+.|.| .+.|.|+|++ ...+.+... ........++.+.. .+|.|.++ +.+|+
T Consensus 15 ~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v-~~~D~ 93 (247)
T 2ghw_B 15 QPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSL-RAEDT 93 (247)
T ss_dssp CTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSC-CGGGC
T ss_pred ecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcC-CHHHC
Confidence 7899999999999987 6789999954 111111000 00112234444421 37999997 99999
Q ss_pred ceEEEEEEcCcee-EEeecEEEEEeecc---------------cccccCCCceeccCCCceEEeCCCCCCCccEEEEcc-
Q psy14896 543 GSYHCKASNKFGS-IISESVQLAFGFIG---------------EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWAR- 605 (813)
Q Consensus 543 G~Y~C~a~n~~g~-~~s~~~~l~v~~~p---------------~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k- 605 (813)
|.|+|.|.|..+. .....+.|.|..++ .+........+.+|+.++|.|.+ .+.|.+.|.|+|
T Consensus 94 G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~ 172 (247)
T 2ghw_B 94 AVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRA-SQSVRSNLAWYQQ 172 (247)
T ss_dssp EEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEE-SSCCTTCEEEEEE
T ss_pred EEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEe-CCCccceEEEEEE
Confidence 9999999998433 22344577776432 12223334557889999999999 688888999999
Q ss_pred -CCCCCc----------ccCCCeEEEeeC---ccEEEEeecccCCeeEEEEEEeee
Q psy14896 606 -DYFPNF----------VEEDKRVFVSYD---GALYFSALEQIDAGNYSCNVQSKV 647 (813)
Q Consensus 606 -~~~~~~----------~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~ 647 (813)
++.... .....++.+..+ ++|+|.+++.+|+|.|+|.|.|..
T Consensus 173 ~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~ 228 (247)
T 2ghw_B 173 KPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNW 228 (247)
T ss_dssp CTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSS
T ss_pred CCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCC
Confidence 554321 012345555433 359999999999999999999853
No 368
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.70 E-value=2.9e-16 Score=147.75 Aligned_cols=155 Identities=17% Similarity=0.152 Sum_probs=113.4
Q ss_pred ceeccCCCceEEeCCCCCCCcc--EEEEccCCCCCcccCCCeEE-EeeCccEEEEeecccCCeeEEEEEEeeecCccccC
Q psy14896 578 EIGNQNWGKAMFCDPPTNYPGV--NYYWARDYFPNFVEEDKRVF-VSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNG 654 (813)
Q Consensus 578 ~~~~~g~~~~l~C~~~~~~p~~--~v~W~k~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 654 (813)
..+..|++++|.|.+ +.|.| .|+|++.+.++ .+.. ....+.|.|.+++.+|+|.|.|.|.|..|.. .
T Consensus 17 v~v~~G~sv~L~C~a--~~p~P~~~i~W~~~~~~l-----~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~---~ 86 (210)
T 1gsm_A 17 VAVALGASRQLTCRL--ACADRGASVQWRGLDTSL-----GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTF---Q 86 (210)
T ss_dssp EEEETTCCEEEEEEE--CCSSTTCEEEEESSTTTT-----CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEE---E
T ss_pred eEEeCCCCEEEEEEC--CCCCCCcceEEeeccccc-----CcEEecCCccEEEECccCcccCceEEEEEEeCCCce---E
Confidence 467889999999998 56666 99999976542 2333 2334569999999999999999999987653 3
Q ss_pred ceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CC----CeEEEEeCCcccCCCceee---------
Q psy14896 655 PFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PV----PSYNWTRRGSPLPRNAYFE--------- 720 (813)
Q Consensus 655 ~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~----p~i~W~k~g~~l~~~~~~~--------- 720 (813)
..+.|+|..+|....+. | .....|+.+ |.|.+.|. |. ++|+|+|||.+|.......
T Consensus 87 ~~~~ltV~~~P~~~~i~-~--------~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~ 156 (210)
T 1gsm_A 87 HTVQLLVYAFPNQLTVS-P--------AALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEE 156 (210)
T ss_dssp EEEEEEEEBCCSEEEEE-S--------SSBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTC
T ss_pred EEEEEEEEecCCCcEEc-c--------ceEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceeccccc
Confidence 45889999999776543 1 245678888 99999985 64 4899999999996543211
Q ss_pred ---ec------ceEEEECCCCCCCCEEEEEEEEcCCCceEE
Q psy14896 721 ---NF------NRILTIPNVKVEDQGEYICRASNDRSALES 752 (813)
Q Consensus 721 ---~~------~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 752 (813)
.. .++|.+.....+|.+.|+|+|.+.+-....
T Consensus 157 ~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~~~~~ 197 (210)
T 1gsm_A 157 PQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLEL 197 (210)
T ss_dssp CSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEETTEEE
T ss_pred ccCCcceEEEEEEEEeecCCcccCCceEEEEEEeeCCCCcc
Confidence 01 234555566677778999999998754433
No 369
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.70 E-value=1.9e-18 Score=170.52 Aligned_cols=166 Identities=14% Similarity=0.135 Sum_probs=92.0
Q ss_pred CCCceeccCCCceEEeCCCCCCCccEEEEccCCCCCcc------------cCCCeEEEee---CccEEEEeecccCCeeE
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV------------EEDKRVFVSY---DGALYFSALEQIDAGNY 639 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~------------~~~~~~~~~~---~~~L~i~~~~~~d~G~Y 639 (813)
+....+.+|++++|.|.+ .+.|.+.|.|+|++..... ....|+.... +.+|.|.+++.+|+|.|
T Consensus 30 p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 108 (233)
T 3bqu_C 30 PASLSMSIGEKVTIRCIT-STDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADY 108 (233)
T ss_dssp CSBC-------CCEEEEE-EEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEE
T ss_pred CCeEEEecCCCEEEEEec-CCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEE
Confidence 344567889999999998 6777788999986421100 1123333332 23699999999999999
Q ss_pred EEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCC-CC-eEEEEeCCcccCCC-
Q psy14896 640 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYP-VP-SYNWTRRGSPLPRN- 716 (813)
Q Consensus 640 ~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P-~p-~i~W~k~g~~l~~~- 716 (813)
.|.|.|..+...... ..|.|...+....+.. ......+.+|+.++|.|.+.|.+ ++ .|+|+|||.++..+
T Consensus 109 ~C~~~~~~~~~~~~~--~~l~V~~~~~~p~v~~-----~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~ 181 (233)
T 3bqu_C 109 YCLQSDNLPYTFGGG--TNLEIKRADAAPTVSI-----FPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGV 181 (233)
T ss_dssp EEEECSSSSCCBCCC--CBC---CCCBCCEEEE-----ECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCE
T ss_pred EEEEecCCceeecCC--EEEEEeCCCCCCEEEE-----eCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCc
Confidence 999998765322221 3455544221111111 00011234699999999999854 43 79999999988765
Q ss_pred cee----e------ecceEEEECCCCCCCCEEEEEEEEcCCC
Q psy14896 717 AYF----E------NFNRILTIPNVKVEDQGEYICRASNDRS 748 (813)
Q Consensus 717 ~~~----~------~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 748 (813)
... . ...+.|.|..+..+|+|.|+|.|.|...
T Consensus 182 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 182 LNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred eEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 111 0 1134699999999999999999999754
No 370
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.70 E-value=8.7e-17 Score=156.77 Aligned_cols=174 Identities=17% Similarity=0.203 Sum_probs=110.0
Q ss_pred CCceeecCCCccccccEEEEeeeccCC--CCeEEEeec--ccccccccc-------cccccCCCccEEee------CCeE
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKE--DYVQDRLVA-------NLIDPLSDKRFTLS------GGNL 258 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~--g~~l~~~~~-------~~~~~~~~~~~~~~------~~~l 258 (813)
|....+.+| ++++|.|.+.|.| .+.|.|||+ |..+..... .........|+.+. +++|
T Consensus 7 p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 81 (219)
T 1c1e_H 7 SGPELKKPG-----ETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYL 81 (219)
T ss_dssp CCCEEECTT-----CCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEE
T ss_pred CCCeEecCC-----CcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEE
Confidence 455666666 7799999999865 689999998 433311000 00011123455543 2478
Q ss_pred EEcCCccccCCeeEEEEeecCcee---eEeeeeEEeeeee----cccccCCCCceeecCCCeEEEecCCCCCCcc-eEEE
Q psy14896 259 IINDPRQVEDRGSYHCKASNKFGS---IISESVQLAFGFI----GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYW 330 (813)
Q Consensus 259 ~i~~~~~~~d~G~Y~C~a~n~~g~---~~s~~~~l~v~~~----~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W 330 (813)
.|.+. +.+|+|.|+|.|.|..+. ..+..+.|.|... |.+........+.+|+.++|.|.+.++.|.| .|+|
T Consensus 82 ~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W 160 (219)
T 1c1e_H 82 QINNL-KNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW 160 (219)
T ss_dssp EECSC-CGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEE
T ss_pred EECCC-CcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEE
Confidence 88885 899999999999997631 2234566776553 2222222233456788899999975448988 9999
Q ss_pred eeccccccccCCccEEEc----cCccEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 331 ARDYFPNFVEEDKRVFVS----YDGALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 331 ~k~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
+|+|..+........... ..+.|.| .....|.|.|+|.|.|..+.
T Consensus 161 ~~~g~~~~~~~~~~~~~~~~~~~~s~L~i-~~~~~d~g~Y~C~a~n~~~~ 209 (219)
T 1c1e_H 161 NSGSLSSGVHTFPAVLQSDLYTLSSSVTV-PSSPRPSETVTCNVAHPASS 209 (219)
T ss_dssp GGGTBCTTEEECCCEESSSCEEEEEEEEE-ESSSTTTSCCEEEEEEGGGT
T ss_pred EeCCcccceEecCCcccCCeEEEEEEEEE-ecccCCCCEEEEEEEeCCCC
Confidence 999986422211111111 1135888 44444669999999998764
No 371
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.69 E-value=7.7e-17 Score=160.42 Aligned_cols=162 Identities=23% Similarity=0.278 Sum_probs=108.7
Q ss_pred CCceeccCCCceEEeCCCCCCC-----ccEEEEccCCC--CC--cc--------cCCCeEEEeeCc---cEEEEeecccC
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYP-----GVNYYWARDYF--PN--FV--------EEDKRVFVSYDG---ALYFSALEQID 635 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p-----~~~v~W~k~~~--~~--~~--------~~~~~~~~~~~~---~L~i~~~~~~d 635 (813)
....+.+|+.++|.|.+ .+.| .+.|.|+|++. .. .+ ....|+.+..++ +|+|.+++.+|
T Consensus 9 ~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 87 (247)
T 1svz_A 9 LYLPVSLGDQASISCRS-SQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAED 87 (247)
T ss_dssp SEEEECTTCCEEEEEEE-SSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CeEEecCCCCEEEEEeC-CCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHH
Confidence 44567889999999999 5666 68999999532 11 00 013455554332 69999999999
Q ss_pred CeeEEEEEEeeecCccccCceeeEEEccCCC-----------ccccccCCCCCCCCCcCCCCCCeEEEEEEecCCC--CC
Q psy14896 636 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN-----------FQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYP--VP 702 (813)
Q Consensus 636 ~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~-----------~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P--~p 702 (813)
+|.|.|.|.|..+... .....|.|..++. ...+..+ ....+.+|++++|.|.+.+.| .+
T Consensus 88 ~G~Y~C~~~n~~~~~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~G~~v~L~C~~~~~~~~~~ 159 (247)
T 1svz_A 88 LGIYYCFQGSHFPPTF--GGGTKLEIKGGGGSGGGGSGGGGSEVQLQQS------GPELKKPGETVKISCKATNYAFTDY 159 (247)
T ss_dssp CEEEEEEECSSSSCEE--CCCEEEEEC---------------CCEEEEC------CCEEECTTCCEEEEEEEESSCGGGS
T ss_pred CEEEEEEEccCCccEE--CCCEEEEEECCccccccccccccCceEEeCC------CceeecCCCcEEEEEEEcCcccCCc
Confidence 9999999998754311 1225677776532 0011111 113589999999999999885 56
Q ss_pred eEEEEeCC--cccC------C-----------Cceee------ecceEEEECCCCCCCCEEEEEEEEcC
Q psy14896 703 SYNWTRRG--SPLP------R-----------NAYFE------NFNRILTIPNVKVEDQGEYICRASND 746 (813)
Q Consensus 703 ~i~W~k~g--~~l~------~-----------~~~~~------~~~~~L~i~~v~~~d~G~Y~C~a~N~ 746 (813)
.+.|+|++ ..+. . ..++. ....+|+|.+++.+|+|.|.|.|.|.
T Consensus 160 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 160 SMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp CEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 99999973 2110 0 11221 12358999999999999999999995
No 372
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.69 E-value=3e-16 Score=156.98 Aligned_cols=187 Identities=16% Similarity=0.198 Sum_probs=117.4
Q ss_pred CceeecCCCccccccEEEEeeeccCC--CCeEEEeecc--cccccccc-------cccccCCCccEEee------CCeEE
Q psy14896 197 TDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------GGNLI 259 (813)
Q Consensus 197 ~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g--~~l~~~~~-------~~~~~~~~~~~~~~------~~~l~ 259 (813)
....+.+| ++|+|.|.+.+.| .+.|.|||.. ..+..... .........|+.+. ..+|.
T Consensus 10 ~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 84 (256)
T 3umt_A 10 GLELVKPG-----ASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLE 84 (256)
T ss_dssp CCEEECTT-----CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEE
T ss_pred CceEEcCC-----CCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEE
Confidence 34556566 7799999998866 7899999853 22111000 00111123445443 12388
Q ss_pred EcCCccccCCeeEEEEeecC----ceeeEeeeeEEeeee----------------ecccccCCCCceeecCCCeEEEecC
Q psy14896 260 INDPRQVEDRGSYHCKASNK----FGSIISESVQLAFGF----------------IGEFNLKRAPEIGNQNWGKAMFCDP 319 (813)
Q Consensus 260 i~~~~~~~d~G~Y~C~a~n~----~g~~~s~~~~l~v~~----------------~~~~~~~~~~~~~~~~~~~~l~C~~ 319 (813)
|.+. +.+|+|.|.|.|.|. .+.. +..+.|.|.. .+.+...+....+.+|+.++|.|.+
T Consensus 85 I~~v-~~~DsG~Y~C~~~~~~~~~~~~~-~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~ 162 (256)
T 3umt_A 85 LRSL-TSEDSAVYYCARDDRYPAWFAYW-GQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRA 162 (256)
T ss_dssp ECSC-CGGGCEEEEEEECCSTTCCSCEE-CCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEE
T ss_pred ECCC-CcccCEEEEEEEccCCCccccEE-CCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEE
Confidence 8875 899999999999987 2222 4456677764 2223333445678899999999996
Q ss_pred CCCCCcceEEEeecc--cccc-c---------cCCccEEEccCc---cEEEeeeeecCCeeeEEEEeeeccccCCCCCce
Q psy14896 320 PTNYPGVNYYWARDY--FPNF-V---------EEDKRVFVSYDG---ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384 (813)
Q Consensus 320 ~~~~p~~~v~W~k~~--~~~~-~---------~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~ 384 (813)
.+.|.+.+.|+|+. .... + ....|+.....+ +|.|.+++.+|+|.|+|.|.|... ...+...
T Consensus 163 -~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~--~~fg~gt 239 (256)
T 3umt_A 163 -SQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSP--PTFGGGT 239 (256)
T ss_dssp -SSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSS--CEECCCE
T ss_pred -ecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCC--cEECCCE
Confidence 55677899999853 2211 0 012444443332 599999999999999999998532 2334457
Q ss_pred eeEEccCCc
Q psy14896 385 PLKVFPHSN 393 (813)
Q Consensus 385 ~l~v~~~~~ 393 (813)
.|.|...+.
T Consensus 240 ~L~V~~~~~ 248 (256)
T 3umt_A 240 KLEIKRAAA 248 (256)
T ss_dssp EEEEC----
T ss_pred EEEEECCCc
Confidence 888876543
No 373
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.69 E-value=8.6e-17 Score=160.98 Aligned_cols=179 Identities=15% Similarity=0.135 Sum_probs=115.9
Q ss_pred ccccccCCCceeccCCCceEEeCCCCC--CCccEEEEccCC--CCCc---------------ccCCCeEEEeeCc-----
Q psy14896 569 GEFNLKRAPEIGNQNWGKAMFCDPPTN--YPGVNYYWARDY--FPNF---------------VEEDKRVFVSYDG----- 624 (813)
Q Consensus 569 p~~~~~~~~~~~~~g~~~~l~C~~~~~--~p~~~v~W~k~~--~~~~---------------~~~~~~~~~~~~~----- 624 (813)
+.+........+.+|+.++|.|.+ .+ .+.+.+.|+|.. .... .....|+.+..++
T Consensus 7 ~~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 85 (256)
T 3juy_B 7 QVQLVQSGAEVKKPGASVKVSCQA-SGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTA 85 (256)
T ss_dssp CCEEEECCCEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEE
T ss_pred eEEEEecCCceecCCCeEEEEEEe-ecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEE
Confidence 344455667788999999999998 44 367899999743 1100 0112466665332
Q ss_pred cEEEEeecccCCeeEEEEEEeeec---------CccccCceeeEEEccCCCcccc-------ccCCCCCCCCCcCCCCCC
Q psy14896 625 ALYFSALEQIDAGNYSCNVQSKVS---------DTGRNGPFFPLKVFPHSNFQQL-------KFPNNFPKTFPEAPKAGD 688 (813)
Q Consensus 625 ~L~i~~~~~~d~G~Y~C~a~n~~g---------~~~~~~~~~~l~v~~~p~~~~~-------~~p~~~~~~~~~~~~~G~ 688 (813)
+|+|.+++.+|+|.|.|.|.|... ..........|.|...+..... ..+.....+....+.+|+
T Consensus 86 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~ 165 (256)
T 3juy_B 86 YMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGE 165 (256)
T ss_dssp EEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTS
T ss_pred EEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCC
Confidence 499999999999999999998710 0111122356778765431100 000011122235688999
Q ss_pred eEEEEEEecCCCC-CeEEEEeC--CcccC------------CCcee----eecceEEEECCCCCCCCEEEEEEEEcCCC
Q psy14896 689 KVRLECVAFGYPV-PSYNWTRR--GSPLP------------RNAYF----ENFNRILTIPNVKVEDQGEYICRASNDRS 748 (813)
Q Consensus 689 ~v~l~C~~~g~P~-p~i~W~k~--g~~l~------------~~~~~----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 748 (813)
+++|.|.+.+.|. +.+.|+|. +..+. ...++ .....+|+|.+++.+|+|.|.|.|.|..+
T Consensus 166 ~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 166 RATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp CEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred CEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 9999999999886 89999993 33221 11122 12245699999999999999999999643
No 374
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.69 E-value=5.2e-17 Score=158.64 Aligned_cols=174 Identities=18% Similarity=0.128 Sum_probs=115.4
Q ss_pred cccEEEEeeecc-CCCCe----EEEeecccccccccc---cccccCCCccEEe---------eCCeEEEcCCccccCCee
Q psy14896 209 LNDITLSCYAGG-YPNPS----YEWFKEDYVQDRLVA---NLIDPLSDKRFTL---------SGGNLIINDPRQVEDRGS 271 (813)
Q Consensus 209 g~~v~l~C~~~g-~P~p~----v~W~k~g~~l~~~~~---~~~~~~~~~~~~~---------~~~~l~i~~~~~~~d~G~ 271 (813)
|++++|.|.+.+ .|.+. |.|+|++....-..- .........++.+ .+++|.|.+. +.+|+|.
T Consensus 14 G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v-~~~D~G~ 92 (221)
T 3eow_R 14 GDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL-RVEDEGS 92 (221)
T ss_dssp SSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS-SCCCCSC
T ss_pred CCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC-ChHHCeE
Confidence 477999999954 45544 999999753210000 0000001223332 2457888885 8999999
Q ss_pred EEEEeecCc-eeeEeeeeEEeeeeecccccCCCCceeecCCCeE-EEecCCCCCCcceEEEeeccccccccCCccEEEcc
Q psy14896 272 YHCKASNKF-GSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKA-MFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349 (813)
Q Consensus 272 Y~C~a~n~~-g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~-l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~ 349 (813)
|+|.|.|.. |.. +..+.|.|..+|.+.+...... ..|+.+. |.|.+..+.|.+.++|+|++...... .......
T Consensus 93 Y~C~~~~~~~~~~-~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~--~~~~~~~ 168 (221)
T 3eow_R 93 YTCLFVTFPQGSR-SVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQT--SQVPGFL 168 (221)
T ss_dssp BEEEEEESSSCSC-EEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCC--EEECCCC
T ss_pred EEEEEEeCCCCce-EEEEEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCcc--ceeecCC
Confidence 999999876 544 6778888877776654433333 5677784 99998779999999999986543221 1111111
Q ss_pred C------ccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCC
Q psy14896 350 D------GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS 392 (813)
Q Consensus 350 ~------~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~ 392 (813)
+ +.|.|.++..+|+|.|+|.|.|..+. ....+.|...|
T Consensus 169 ~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~-----~~~~~~v~~~~ 212 (221)
T 3eow_R 169 SGTVTVTSLWILVPSSQVDGKQVTCKVEHESFE-----KPQLLTVSLTV 212 (221)
T ss_dssp BTTBCCEEEEECCCCSCCCCCCEEEEECCSCSS-----SCEEEEECCCC
T ss_pred CCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCC-----CCeEEEEEEEE
Confidence 2 36999999999999999999998753 23667776554
No 375
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.69 E-value=4.2e-16 Score=145.86 Aligned_cols=156 Identities=14% Similarity=0.148 Sum_probs=106.1
Q ss_pred ceeecCCCccccccEEEEeeecc-CCCCeEEEeec-cccccccccc----ccccCCCccEEe--eCCeEEEcCCccccCC
Q psy14896 198 DVVFDLSKRSILNDITLSCYAGG-YPNPSYEWFKE-DYVQDRLVAN----LIDPLSDKRFTL--SGGNLIINDPRQVEDR 269 (813)
Q Consensus 198 ~~~v~~g~~~~g~~v~l~C~~~g-~P~p~v~W~k~-g~~l~~~~~~----~~~~~~~~~~~~--~~~~l~i~~~~~~~d~ 269 (813)
.+.+.+| ++|+|.|.+.+ .+.+.|.|+|+ +..+...... ..+.....|+.+ .+++|.|.+. +.+|+
T Consensus 8 ~v~v~~G-----~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v-~~~D~ 81 (180)
T 2dru_A 8 NVNAITG-----SNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNV-SKEDR 81 (180)
T ss_dssp EEEEETT-----SCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSC-CGGGC
T ss_pred eEEEEeC-----CCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCC-CHHHC
Confidence 4555555 77999999865 34789999995 4333211100 111222256665 4788999986 89999
Q ss_pred eeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEcc
Q psy14896 270 GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349 (813)
Q Consensus 270 G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~ 349 (813)
|.|+|.+.+.. ..+..+.|.|..++. .|.....+..++|.|.+..| |.+.++|+|++.++. ...
T Consensus 82 G~Y~C~v~~~~--~~~~~~~L~V~~~~~-----~P~i~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~--------~~~ 145 (180)
T 2dru_A 82 GDYYMRMLHET--EDQWKITMEVYEMVS-----KPMIYWECSNATLTCEVLEG-TDVELKLYQGKEHLR--------SLR 145 (180)
T ss_dssp EEEEEEEESSS--EEEEEEEEEEECCCC-----CCEEEEEGGGTEEEEECSSC-TTCEEEEEETTEEEE--------EES
T ss_pred eEEEEEEEcCC--eEEEEEEEEEECCCC-----CCEEEecCCCEEEEEEeCCC-CCCEEEEEECCeECc--------CCC
Confidence 99999998766 335677788765421 12223345668999997566 999999999998742 123
Q ss_pred CccEEEeeeeecCCeeeEEEEeeecccc
Q psy14896 350 DGALYFSALEQIDAGNYSCNVQSKVSDT 377 (813)
Q Consensus 350 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 377 (813)
+.+|.+.. .+|+|.|+|.|.|..+..
T Consensus 146 ~~~l~~~~--~~d~g~Y~C~a~N~~~~~ 171 (180)
T 2dru_A 146 QKTMSYQW--TNLRAPFKCKAVNRVSQE 171 (180)
T ss_dssp SSEEEEEC--SCCSSCEEEEEEETTEEE
T ss_pred CCEEEEEE--hhcCccEEEEEecCcCcc
Confidence 34566633 789999999999998753
No 376
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.69 E-value=4.4e-16 Score=154.91 Aligned_cols=177 Identities=19% Similarity=0.261 Sum_probs=115.7
Q ss_pred ceeeCCCceeecCCCccccccEEEEeeeccCC-----CCeEEEeecc--cccccccc--cccccCCCccEEee----CCe
Q psy14896 191 YFIKQPTDVVFDLSKRSILNDITLSCYAGGYP-----NPSYEWFKED--YVQDRLVA--NLIDPLSDKRFTLS----GGN 257 (813)
Q Consensus 191 ~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P-----~p~v~W~k~g--~~l~~~~~--~~~~~~~~~~~~~~----~~~ 257 (813)
.++..|.++.+.+| ++++|.|.+.+.| .+.|.|||+. ..+..... .........++... ..+
T Consensus 3 ~v~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 77 (247)
T 1svz_A 3 LMTQTPLYLPVSLG-----DQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFT 77 (247)
T ss_dssp CEEEECSEEEECTT-----CCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEE
T ss_pred cEEecCCeEEecCC-----CCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEE
Confidence 35566778888777 6799999999888 6899999964 21110000 00011123455443 236
Q ss_pred EEEcCCccccCCeeEEEEeecCceeeEeeeeEEeeeeec------------ccc-cCCCCceeecCCCeEEEecCCCCC-
Q psy14896 258 LIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG------------EFN-LKRAPEIGNQNWGKAMFCDPPTNY- 323 (813)
Q Consensus 258 l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~------------~~~-~~~~~~~~~~~~~~~l~C~~~~~~- 323 (813)
|.|.+. +.+|+|.|+|.|.|..+...+..+.|.|..++ ++. .......+.+|+.++|.|.+....
T Consensus 78 L~I~~v-~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~ 156 (247)
T 1svz_A 78 LKISRV-EAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAF 156 (247)
T ss_dssp EEESSC-CGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCG
T ss_pred EEECCC-CHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCccc
Confidence 888885 89999999999999866544455677776542 222 223445688899999999974332
Q ss_pred CcceEEEeecc--cccc-c--------------cCCccEEEcc-----CccEEEeeeeecCCeeeEEEEeee
Q psy14896 324 PGVNYYWARDY--FPNF-V--------------EEDKRVFVSY-----DGALYFSALEQIDAGNYSCNVQSK 373 (813)
Q Consensus 324 p~~~v~W~k~~--~~~~-~--------------~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~a~n~ 373 (813)
|.+.+.|+|++ .... + ....|+.+.. ..+|.|.+++.+|+|.|+|.|.|.
T Consensus 157 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 157 TDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp GGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred CCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 35799999974 2110 0 0134555433 237999999999999999999985
No 377
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.69 E-value=9.9e-17 Score=156.21 Aligned_cols=168 Identities=16% Similarity=0.225 Sum_probs=114.1
Q ss_pred CceeccCCCceEEeCCCCCCC--ccEEEEccCCC--CC--cc-------------cCCCeEEEeeC-----ccEEEEeec
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYP--GVNYYWARDYF--PN--FV-------------EEDKRVFVSYD-----GALYFSALE 632 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~~--~~--~~-------------~~~~~~~~~~~-----~~L~i~~~~ 632 (813)
+..+.+|+.++|.|.+ .+.+ .+.|.|||... .. .+ ....|+.+..+ .+|+|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (220)
T 2fbj_H 9 GGLVQPGGSLKLSCAA-SGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVR 87 (220)
T ss_dssp CEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCC
T ss_pred CeEecCCCcEEEEEEe-cCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCC
Confidence 4567889999999998 5555 57899998632 10 00 11356666643 369999999
Q ss_pred ccCCeeEEEEEEeeecCccccCceeeEEEccCCC-ccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CC--CeEEEEe
Q psy14896 633 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN-FQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PV--PSYNWTR 708 (813)
Q Consensus 633 ~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~-~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~--p~i~W~k 708 (813)
.+|+|.|.|.+.|..+..........|.|...+. .+.+.. .. ...+.+|+.++|.|.+.|. |. +.|+|+|
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~-----~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~ 161 (220)
T 2fbj_H 88 SEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYP-----LT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGK 161 (220)
T ss_dssp GGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEE-----EC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESC
T ss_pred hhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEE-----ee-cccccCCCcEEEEEEEEeEECCCcEEEEEec
Confidence 9999999999998643200011225677775321 111111 01 2346789999999999987 76 7999999
Q ss_pred CCcccCC--Cc-eee-----ecceEEEECCCCCCCCEEEEEEEEcCCCceE
Q psy14896 709 RGSPLPR--NA-YFE-----NFNRILTIPNVKVEDQGEYICRASNDRSALE 751 (813)
Q Consensus 709 ~g~~l~~--~~-~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 751 (813)
+|..+.. .. ... ...+.|.|.....+|+|.|+|.|.|..|...
T Consensus 162 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 162 SGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred CCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 9987621 00 000 1124699999999999999999999988754
No 378
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.69 E-value=2.5e-17 Score=163.93 Aligned_cols=168 Identities=13% Similarity=0.206 Sum_probs=113.6
Q ss_pred CCceeccCCCceEEeCCCCCCCccEEEEccC----------------CCCCcc-cCCCeEEEee----CccEEEEeeccc
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYPGVNYYWARD----------------YFPNFV-EEDKRVFVSY----DGALYFSALEQI 634 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~----------------~~~~~~-~~~~~~~~~~----~~~L~i~~~~~~ 634 (813)
....+.+|+.++|.|.+ .+.+.+.|.|+|. +..... ....|+.+.. +.+|.|.+++.+
T Consensus 9 ~~~~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~ 87 (246)
T 4dzb_B 9 SWVISKSGTSVKIECRS-LDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPE 87 (246)
T ss_dssp SEEEEETTSCEEEEEEE-SSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGG
T ss_pred cEEEEeCCCcEEEEeEe-cCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHH
Confidence 34567889999999998 6778999999992 211000 0114555543 236999999999
Q ss_pred CCeeEEEEEEeeecCc-cccCceeeEEEcc------CCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCC--eEE
Q psy14896 635 DAGNYSCNVQSKVSDT-GRNGPFFPLKVFP------HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP--SYN 705 (813)
Q Consensus 635 d~G~Y~C~a~n~~g~~-~~~~~~~~l~v~~------~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p--~i~ 705 (813)
|+|.|.|.|.|..+.. ........|.|.. +|.+... ......+.+|+.++|.|.+.|.|++ .|+
T Consensus 88 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~-------~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~ 160 (246)
T 4dzb_B 88 DSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVF-------EPSEAEISHTQKATLVCLATGFYPDHVELS 160 (246)
T ss_dssp GCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEE-------CCCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred HCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEee-------cCCchhccCCCcEEEEEEEccCcCCceEEE
Confidence 9999999999865421 1112234577764 2221110 1111335669999999999997765 899
Q ss_pred EEeCCcccCCCceee-----------ec----ceEEEECCCCCCC-CEEEEEEEEcCCCceE
Q psy14896 706 WTRRGSPLPRNAYFE-----------NF----NRILTIPNVKVED-QGEYICRASNDRSALE 751 (813)
Q Consensus 706 W~k~g~~l~~~~~~~-----------~~----~~~L~i~~v~~~d-~G~Y~C~a~N~~G~~~ 751 (813)
|+|||..|....... .. .+.|.|.....+| +|.|+|.|.|......
T Consensus 161 W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 161 WWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp EEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred EEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 999999887643221 11 2348899888888 9999999999865443
No 379
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.69 E-value=3e-16 Score=157.25 Aligned_cols=196 Identities=14% Similarity=0.204 Sum_probs=113.9
Q ss_pred CceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecc--cccccccccc-------ccc-CCCccEEe-----e
Q psy14896 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED--YVQDRLVANL-------IDP-LSDKRFTL-----S 254 (813)
Q Consensus 190 P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g--~~l~~~~~~~-------~~~-~~~~~~~~-----~ 254 (813)
|.++..|..+.+.+| ++|+|.|.+.+.|.+.+.|||.. .......... ... ..+.+... .
T Consensus 3 ~~v~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 77 (259)
T 3omz_A 3 SNLEGRTKSVIRQTG-----SSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRK 77 (259)
T ss_dssp --------CEEEETT-----CCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--C
T ss_pred cccccCCceeEecCC-----CcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCC
Confidence 556667788888777 67999999999899999999942 2111000000 000 01122221 2
Q ss_pred CCeEEEcCCccccCCeeEEEEeecCcee--eEeeeeEEeeeee-----------------cccccCCCCceeecCCCeEE
Q psy14896 255 GGNLIINDPRQVEDRGSYHCKASNKFGS--IISESVQLAFGFI-----------------GEFNLKRAPEIGNQNWGKAM 315 (813)
Q Consensus 255 ~~~l~i~~~~~~~d~G~Y~C~a~n~~g~--~~s~~~~l~v~~~-----------------~~~~~~~~~~~~~~~~~~~l 315 (813)
+.+|.|.+. +.+|+|.|+|.|.|..+. ..+..+.|.|... +.+...+....+.+|+.++|
T Consensus 78 ~~~L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L 156 (259)
T 3omz_A 78 NLRMILRNL-IENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTL 156 (259)
T ss_dssp CCEEEESSC-CGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEE
T ss_pred eEEEEECCC-CcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEE
Confidence 346888885 899999999999987662 2345566777653 22333345567889999999
Q ss_pred EecCCCCCCcceEEEeeccc--ccc-c---------cCCccEEEcc-----CccEEEeeeeecCCeeeEEEEeeeccc--
Q psy14896 316 FCDPPTNYPGVNYYWARDYF--PNF-V---------EEDKRVFVSY-----DGALYFSALEQIDAGNYSCNVQSKVSD-- 376 (813)
Q Consensus 316 ~C~~~~~~p~~~v~W~k~~~--~~~-~---------~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~a~n~~g~-- 376 (813)
.|.+....|.+.+.|+|.+. .+. + ....|+.+.. ...|.|.+++.+|+|.|.|.+.+..+.
T Consensus 157 ~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~ 236 (259)
T 3omz_A 157 NCLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGESLTRAD 236 (259)
T ss_dssp CCEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESCSSTTC
T ss_pred EEECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCccCCCC
Confidence 99865445889999998642 110 0 1124555543 236999999999999999999753211
Q ss_pred cCCCCCceeeEEccC
Q psy14896 377 TGRNGPFFPLKVFPH 391 (813)
Q Consensus 377 ~~~~s~~~~l~v~~~ 391 (813)
......-..|.|...
T Consensus 237 ~~~fg~GT~l~v~~~ 251 (259)
T 3omz_A 237 KLIFGKGTRVTVEPR 251 (259)
T ss_dssp CCEECCCEEEEEEC-
T ss_pred ceEECCCCEEEEeeC
Confidence 112233456666544
No 380
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.69 E-value=1.6e-17 Score=163.72 Aligned_cols=180 Identities=18% Similarity=0.247 Sum_probs=99.4
Q ss_pred CceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeeccc--ccccccc--cccccCCCccEEee----CCeEEEc
Q psy14896 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY--VQDRLVA--NLIDPLSDKRFTLS----GGNLIIN 261 (813)
Q Consensus 190 P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~--~l~~~~~--~~~~~~~~~~~~~~----~~~l~i~ 261 (813)
+.++..|..+.+.+| ++++|.|.+.+.|.+.|.|||++. .+..... .........++... +.+|.|.
T Consensus 24 ~~v~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 98 (233)
T 3bqu_C 24 TTVTQSPASLSMSIG-----EKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIE 98 (233)
T ss_dssp CCEEEECSBC------------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC--
T ss_pred eeEEEcCCeEEEecC-----CCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEEC
Confidence 455666777777666 779999999998888999999752 1100000 00000112232221 2267777
Q ss_pred CCccccCCeeEEEEeecCceeeEeeeeEEeeee---ecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEEeeccccc
Q psy14896 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAFGF---IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPN 337 (813)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~---~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~k~~~~~ 337 (813)
+. +.+|+|.|+|.|.|..+...+..+.|.|.. +|.+.+.........|+.++|.|.+.+..|.+ +++|+|||+++
T Consensus 99 ~v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 177 (233)
T 3bqu_C 99 NM-LSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 177 (233)
T ss_dssp ----CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC----
T ss_pred CC-CHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeC
Confidence 75 899999999999987765434445566654 33333333333445688899999975445653 89999999874
Q ss_pred cccCCc--cEEEccC------ccEEEeeeeecCCeeeEEEEeeecc
Q psy14896 338 FVEEDK--RVFVSYD------GALYFSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 338 ~~~~~~--~~~~~~~------~~L~i~~v~~~D~G~Y~C~a~n~~g 375 (813)
...... ......+ +.|.|..+..+|+|.|+|.|.|...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 178 QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp -CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred CCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 322000 1111122 2588999999999999999999754
No 381
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.69 E-value=5.7e-16 Score=155.37 Aligned_cols=194 Identities=16% Similarity=0.267 Sum_probs=123.8
Q ss_pred CceeeCCCceeecCCCccccccEEEEeeeccCC------CCeEEEeecc--cccccccc--cccccCCCccEEee----C
Q psy14896 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYP------NPSYEWFKED--YVQDRLVA--NLIDPLSDKRFTLS----G 255 (813)
Q Consensus 190 P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P------~p~v~W~k~g--~~l~~~~~--~~~~~~~~~~~~~~----~ 255 (813)
+.++..|..+.+.+| ++|+|.|.+.+.| .+.|.|||+. ..+..... .........|+... .
T Consensus 6 ~~v~q~p~~v~v~~G-----~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~ 80 (264)
T 2gjj_A 6 IVLTQTPSSLPVSVG-----EKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTD 80 (264)
T ss_dssp CCEEEECSEEEEETT-----CCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTE
T ss_pred cceEecCCeEEecCC-----CcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCE
Confidence 566777888888777 6799999999887 6899999963 22211000 00001123455543 2
Q ss_pred CeEEEcCCccccCCeeEEEEeecCceeeEeeeeEEeeeeec------------------cccc-CCCCceeecCCCeEEE
Q psy14896 256 GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG------------------EFNL-KRAPEIGNQNWGKAMF 316 (813)
Q Consensus 256 ~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~------------------~~~~-~~~~~~~~~~~~~~l~ 316 (813)
.+|.|.+. +.+|+|.|.|.|.|..+...+..+.|.|..++ .+.+ ......+.+|+.++|.
T Consensus 81 ~~L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~ 159 (264)
T 2gjj_A 81 FTLTIGSV-KAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKIS 159 (264)
T ss_dssp EEEEESSC-CGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEE
T ss_pred EEEEECCC-CHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEE
Confidence 36888885 89999999999998765433455677776543 2222 2334567889999999
Q ss_pred ecCCCCCC--cceEEEeecc--cccc-cc--------------CCccEEEcc-----CccEEEeeeeecCCeeeEEEEee
Q psy14896 317 CDPPTNYP--GVNYYWARDY--FPNF-VE--------------EDKRVFVSY-----DGALYFSALEQIDAGNYSCNVQS 372 (813)
Q Consensus 317 C~~~~~~p--~~~v~W~k~~--~~~~-~~--------------~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~a~n 372 (813)
|.+. +.| .+.+.|+|+. .... +. ...|+.+.. ..+|.|.+++.+|+|.|+|.|.|
T Consensus 160 C~~~-~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n 238 (264)
T 2gjj_A 160 CKAS-GYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSG 238 (264)
T ss_dssp EEEE-SSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEe-CCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEec
Confidence 9964 444 3899999973 2211 10 023444321 23799999999999999999998
Q ss_pred ec--cccCCCCCceeeEEcc
Q psy14896 373 KV--SDTGRNGPFFPLKVFP 390 (813)
Q Consensus 373 ~~--g~~~~~s~~~~l~v~~ 390 (813)
.. ......+....|+|..
T Consensus 239 ~~~~~~~~~fg~gt~l~v~~ 258 (264)
T 2gjj_A 239 NYEEYAMDYWGQGTSVTVSS 258 (264)
T ss_dssp SGGGCSCCCBCCCEEEEEC-
T ss_pred CCCCcceEEECCCEEEEEec
Confidence 52 1111123345666653
No 382
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.68 E-value=6.5e-17 Score=158.20 Aligned_cols=167 Identities=19% Similarity=0.292 Sum_probs=112.1
Q ss_pred CceeccCCCceEEeCCCCCCC--ccEEEEccCC--CCCc-c--------------cCCCeEEEeeC-----ccEEEEeec
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYP--GVNYYWARDY--FPNF-V--------------EEDKRVFVSYD-----GALYFSALE 632 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~--~~~~-~--------------~~~~~~~~~~~-----~~L~i~~~~ 632 (813)
+..+.+|+.++|.|.+ .+.| .+.|.|+|+. .... + ....|+.+..+ .+|+|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (225)
T 1op3_H 9 GGLVKAGGSLILSCGV-SNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMR 87 (225)
T ss_dssp CEEEETTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CeEecCCCCEEEEEEe-cCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCC
Confidence 4567889999999998 5665 6889999864 2110 0 12356666542 469999999
Q ss_pred ccCCeeEEEEEEeeecC----c-cccCceeeEEEccCC-Cccccc-cCCCCCCCCCcCCCCCCeEEEEEEecCC-CCC-e
Q psy14896 633 QIDAGNYSCNVQSKVSD----T-GRNGPFFPLKVFPHS-NFQQLK-FPNNFPKTFPEAPKAGDKVRLECVAFGY-PVP-S 703 (813)
Q Consensus 633 ~~d~G~Y~C~a~n~~g~----~-~~~~~~~~l~v~~~p-~~~~~~-~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~p-~ 703 (813)
.+|+|.|.|.+.|..|. . ........|.|...+ ..+.+. .++ ...+.+|+.++|.|.+.|. |.| .
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~------~~~~~~g~~v~L~C~~~g~~P~p~~ 161 (225)
T 1op3_H 88 VEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAP------SSKSTSGGTAALGCLVKDYFPEPVT 161 (225)
T ss_dssp GGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECC------CTTCCCCCEEEEEEEEEEEBSSCCE
T ss_pred hhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecc------cccccCCCcEEEEEEEEeEECCCeE
Confidence 99999999999997651 0 011123567777521 111111 111 1235789999999999987 777 9
Q ss_pred EEEEeCCcccCCCc---eee-----ecceEEEECCCCCCCCEEEEEEEEcCCCceE
Q psy14896 704 YNWTRRGSPLPRNA---YFE-----NFNRILTIPNVKVEDQGEYICRASNDRSALE 751 (813)
Q Consensus 704 i~W~k~g~~l~~~~---~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 751 (813)
|+|+|+|..+.... ... ...+.|.|.++..+| |.|+|.|.|..+...
T Consensus 162 v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 162 VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp EECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred EEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 99999997643111 001 113469999999889 999999999766543
No 383
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.68 E-value=5e-16 Score=155.29 Aligned_cols=192 Identities=13% Similarity=0.096 Sum_probs=121.0
Q ss_pred CceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecc--cccccccc---cccccCCCccEEee------CCeE
Q psy14896 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED--YVQDRLVA---NLIDPLSDKRFTLS------GGNL 258 (813)
Q Consensus 190 P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g--~~l~~~~~---~~~~~~~~~~~~~~------~~~l 258 (813)
+.++..|..+.+.+| ++|+|.|.+.+.|.+.|.|||.. ..+..... .........++... +.+|
T Consensus 4 ~~v~q~p~~~~v~~G-----~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL 78 (256)
T 3tf7_C 4 QSVTQPDARVTVSEG-----ASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHL 78 (256)
T ss_dssp CEEECSCSEEEEETT-----SCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEE
T ss_pred cEEEecCceEEecCC-----CeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEE
Confidence 345666777888777 67999999998899999999953 21110000 00001123344431 3358
Q ss_pred EEcCCccccCCeeEEEEeecCcee---eEeeeeEEeeee--------------------ecccccCCCCceeecCCCeEE
Q psy14896 259 IINDPRQVEDRGSYHCKASNKFGS---IISESVQLAFGF--------------------IGEFNLKRAPEIGNQNWGKAM 315 (813)
Q Consensus 259 ~i~~~~~~~d~G~Y~C~a~n~~g~---~~s~~~~l~v~~--------------------~~~~~~~~~~~~~~~~~~~~l 315 (813)
.|.+. +.+|+|.|+|.|.|..+. .....+.|.|.. ++.+...+....+.+|+.++|
T Consensus 79 ~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L 157 (256)
T 3tf7_C 79 RKASV-HRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTL 157 (256)
T ss_dssp EESSC-CGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEE
T ss_pred EECCC-CcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEE
Confidence 88885 899999999999987541 123446666654 222333344556778999999
Q ss_pred EecCCCCCCcceEEEeeccccccc---c------------CCccEEEcc----CccEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 316 FCDPPTNYPGVNYYWARDYFPNFV---E------------EDKRVFVSY----DGALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 316 ~C~~~~~~p~~~v~W~k~~~~~~~---~------------~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
.|.+.. . .+.+.|+|....... . ...|+.+.. ..+|.|.+++.+|+|.|+|.|.|..|.
T Consensus 158 ~C~~~~-~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~ 235 (256)
T 3tf7_C 158 SCRQTN-S-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQ 235 (256)
T ss_dssp CEEECS-C-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTE
T ss_pred EEEcCC-C-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCc
Confidence 999754 3 678999984321100 0 122333222 237999999999999999999998653
Q ss_pred cCCCCCceeeEEcc
Q psy14896 377 TGRNGPFFPLKVFP 390 (813)
Q Consensus 377 ~~~~s~~~~l~v~~ 390 (813)
. .......|.|..
T Consensus 236 ~-~fG~gt~l~v~~ 248 (256)
T 3tf7_C 236 L-YFGEGSKLTVLE 248 (256)
T ss_dssp E-EECCCEEEEEEC
T ss_pred c-EECCCeEEEEEc
Confidence 2 223345666653
No 384
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.68 E-value=2.3e-16 Score=146.24 Aligned_cols=148 Identities=14% Similarity=0.090 Sum_probs=100.0
Q ss_pred cccEEEEeeeccCCCCeEEEeeccccccccccc--ccccCCCccEEe--eCCeEEEcCCccccCCeeEEEEeecCceeeE
Q psy14896 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN--LIDPLSDKRFTL--SGGNLIINDPRQVEDRGSYHCKASNKFGSII 284 (813)
Q Consensus 209 g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~--~~~~~~~~~~~~--~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~ 284 (813)
|++|+|.|.+.+ |.+.|.|+|++..+...... ........|..+ .+++|.|.+. +.+|+|.|+|.|.|..|
T Consensus 10 G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v-~~~DsG~Y~C~~~n~~~--- 84 (171)
T 1ccz_A 10 YGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNL-TSSDEDEYEMESPNITD--- 84 (171)
T ss_dssp TCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSC-CGGGCEEEEEECTTCCS---
T ss_pred CCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCC-ChhhCceEEEEEeCCCC---
Confidence 478999999965 89999999998754321110 001112235554 4789999986 89999999999999888
Q ss_pred eeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCcceEEEeeccccccccCCccEEEccCccEEEeeeeecCCe
Q psy14896 285 SESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAG 364 (813)
Q Consensus 285 s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G 364 (813)
+..+.|.|..++.. |.........+|.|.+ .+.|.|.++|+|||.++... ....|.+. ..+|+|
T Consensus 85 ~~~~~L~V~~~~~~-----p~i~~~~~~~~L~C~~-~~~p~p~i~W~~~~~~l~~~--------~~~~l~~~--~~~~~g 148 (171)
T 1ccz_A 85 TMKFFLYVLEMVSK-----PMIYWECSNATLTCEV-LEGTDVELKLYQGKEHLRSL--------RQKTMSYQ--WTNLRA 148 (171)
T ss_dssp CEEEEEEEECCCCC-----CEEEEETTTTEEEEEC-SSCSSCEEEEEETTEEEEEE--------SSSEEEEE--CSCCSS
T ss_pred cEEEEEEEECcCCC-----CEEEEecCCcEEEEEe-CCCCCcEEEEEECCEECcCC--------cceEEEEe--ccCCCc
Confidence 45677777654321 1111111224899996 55689999999999864311 12233333 477899
Q ss_pred eeEEEEeeecccc
Q psy14896 365 NYSCNVQSKVSDT 377 (813)
Q Consensus 365 ~Y~C~a~n~~g~~ 377 (813)
.|+|.|.|..+..
T Consensus 149 ~Y~C~a~N~~~~~ 161 (171)
T 1ccz_A 149 PFKCKAVNRVSQE 161 (171)
T ss_dssp CEEEEEEETTEEE
T ss_pred eEEEEEEcccCcc
Confidence 9999999998753
No 385
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.68 E-value=4.2e-16 Score=151.38 Aligned_cols=172 Identities=15% Similarity=0.172 Sum_probs=120.1
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEee----CCeEEEcCC
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS----GGNLIINDP 263 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~----~~~l~i~~~ 263 (813)
.+|.| ..|.++.+.+| +.++|.|.+.|.|.|.|.|+|+|..+.. ....++.+. .++|.|.+.
T Consensus 18 ~~P~~-~~p~~~~~~~G-----~~v~l~C~~~g~p~p~i~W~~~g~~l~~--------~~~~~~~~~~~~~~~~L~i~~~ 83 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEG-----NQVNITCEVFAYPSATISWFRDGQLLPS--------SNYSNIKIYNTPSASYLEVTPD 83 (215)
T ss_dssp EEEEE-ECCSEEEECTT-----CCEEEEEEEEEESCCEEEEEETTEESSC--------SSSCSEEEEEETTEEEEEECCC
T ss_pred cCCcc-cCCceEEEECC-----CCEEEEEEEeecCCCEEEEEECCeECCC--------CCCccEEEecCCCeeEEEEecC
Confidence 46778 57778877777 6799999999999999999999987632 222334433 356778775
Q ss_pred ccccCCeeEEEEeecCceeeEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCC---CCCCcc--eEEEeecccccc
Q psy14896 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP---TNYPGV--NYYWARDYFPNF 338 (813)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~---~~~p~~--~v~W~k~~~~~~ 338 (813)
+.+|+|.|+|.|.|..|.. +..+.|.|..+|...... .....+..+.|.|... .+.|.. .+.|.+++...-
T Consensus 84 -~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~P~~p~~~--~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w 159 (215)
T 3mtr_A 84 -SENDFGNYNCTAVNRIGQE-SLEFILVQADTPSSPSID--QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVW 159 (215)
T ss_dssp -SGGGCEEEEEEEECSSCEE-EEEEEEEECCCCCCCEEE--EEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCC
T ss_pred -ChhhCeEEEEEEEECCCce-EEEEEEEECCCCCCCcce--EEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcc
Confidence 8999999999999999987 667888876655443221 1223455678888642 344544 578988876421
Q ss_pred ccCCccEEEcc---CccEEEeeeeecCCeeeEEEEeeeccccCC
Q psy14896 339 VEEDKRVFVSY---DGALYFSALEQIDAGNYSCNVQSKVSDTGR 379 (813)
Q Consensus 339 ~~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 379 (813)
. ........ +..|.|.++...|.|.|+|.|.|..|....
T Consensus 160 ~--~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~ 201 (215)
T 3mtr_A 160 H--SKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEI 201 (215)
T ss_dssp E--EEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCC
T ss_pred c--ccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCc
Confidence 1 01111111 257999999999999999999999985433
No 386
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.68 E-value=1.7e-16 Score=155.27 Aligned_cols=175 Identities=14% Similarity=0.181 Sum_probs=107.5
Q ss_pred CCCceeecCCCccccccEEEEeeeccCC--CCeEEEeecc--ccccccc-------ccccccCCCccEEee------CCe
Q psy14896 195 QPTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLV-------ANLIDPLSDKRFTLS------GGN 257 (813)
Q Consensus 195 ~p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g--~~l~~~~-------~~~~~~~~~~~~~~~------~~~ 257 (813)
+|....+.+| ++|+|.|.+.+.| .+.|.|||++ ..+.... ..........|+.+. +.+
T Consensus 6 qp~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 80 (227)
T 1mju_H 6 QPGAELVKPG-----ASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAY 80 (227)
T ss_dssp CCSEEEECTT-----CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEE
T ss_pred CCCCeEEcCC-----CCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEE
Confidence 3555666666 7799999999877 6899999975 2221000 000011113455542 246
Q ss_pred EEEcCCccccCCeeEEEEeecCceeeEeeeeEEeeee----ecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEEee
Q psy14896 258 LIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWAR 332 (813)
Q Consensus 258 l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~k 332 (813)
|.|.+. +.+|+|.|.|.|.|..+......+.|.|.. .|.+.+......+..|+.++|.|.+.+..|.+ .++|++
T Consensus 81 L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 159 (227)
T 1mju_H 81 MQLSSL-TSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNS 159 (227)
T ss_dssp EEECSC-CGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGG
T ss_pred EEECCC-CcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEec
Confidence 888885 899999999999986543333456677754 12222222223456788999999975445776 999999
Q ss_pred ccccccccCCccEEE----ccCccEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 333 DYFPNFVEEDKRVFV----SYDGALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 333 ~~~~~~~~~~~~~~~----~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
++..+.......+.. ...+.|.|..+..+| |.|+|.|.|..+.
T Consensus 160 ~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 206 (227)
T 1mju_H 160 GSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASS 206 (227)
T ss_dssp GTBCTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGT
T ss_pred CCCcCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCC
Confidence 998643221111111 112468898888888 9999999997653
No 387
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.68 E-value=2.6e-16 Score=157.62 Aligned_cols=185 Identities=18% Similarity=0.229 Sum_probs=115.2
Q ss_pred CCceeccCCCceEEeCCCCC--CCccEEEEccCCC--CC-cc-------------cCCCeEEEeeCc-----cEEEEeec
Q psy14896 576 APEIGNQNWGKAMFCDPPTN--YPGVNYYWARDYF--PN-FV-------------EEDKRVFVSYDG-----ALYFSALE 632 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~--~p~~~v~W~k~~~--~~-~~-------------~~~~~~~~~~~~-----~L~i~~~~ 632 (813)
.+..+.+|+.++|.|.+ .+ .+.+.+.|+|... .. .+ ....|+.+..++ +|+|.+++
T Consensus 16 ~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 94 (257)
T 3gkz_A 16 GPSLVKPSQTLSLTCSV-TGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVS 94 (257)
T ss_dssp CCSEECTTCCEEEEEEE-EESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCeEEcCCCcEEEEEEE-EcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCC
Confidence 34567889999999998 45 3578999999431 10 00 123456555433 59999999
Q ss_pred ccCCeeEEEEEEeeecCc-cccCceeeEEEccCCCcc-----c-cccCCCCCCCCCcCCCCCCeEEEEEEecCCCCC-eE
Q psy14896 633 QIDAGNYSCNVQSKVSDT-GRNGPFFPLKVFPHSNFQ-----Q-LKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP-SY 704 (813)
Q Consensus 633 ~~d~G~Y~C~a~n~~g~~-~~~~~~~~l~v~~~p~~~-----~-~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p-~i 704 (813)
.+|+|.|.|.|.|..+.. ........|.|..++... . ...+.....+....+.+|++++|.|.+.+.|.+ .+
T Consensus 95 ~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v 174 (257)
T 3gkz_A 95 SEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSSHL 174 (257)
T ss_dssp GGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGGGE
T ss_pred hhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccceEE
Confidence 999999999999863211 111223567777651100 0 000011112223568899999999999999888 99
Q ss_pred EEEeC--CcccCC------------Cceee----ecceEEEECCCCCCCCEEEEEEEEcCCCce-EEEEEEEEEcC
Q psy14896 705 NWTRR--GSPLPR------------NAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSAL-ESSVTISIQAE 761 (813)
Q Consensus 705 ~W~k~--g~~l~~------------~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~-~~~~~l~V~~~ 761 (813)
.|+|+ +..+.. ..++. ....+|+|.+++.+|+|.|.|.|.|..... ..-..|.|...
T Consensus 175 ~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v~~~ 250 (257)
T 3gkz_A 175 YWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIKRA 250 (257)
T ss_dssp EEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCC
T ss_pred EEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEEEeC
Confidence 99994 333210 01111 123469999999999999999999854322 12345666543
No 388
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.68 E-value=9e-17 Score=161.15 Aligned_cols=174 Identities=14% Similarity=0.118 Sum_probs=103.2
Q ss_pred cccCCCceeccCCCceEEeCCCCCCCccEEEEccCC---CCCcc-cC--------------CCeEEE----eeCccEEEE
Q psy14896 572 NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDY---FPNFV-EE--------------DKRVFV----SYDGALYFS 629 (813)
Q Consensus 572 ~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~---~~~~~-~~--------------~~~~~~----~~~~~L~i~ 629 (813)
...+....+.+|+.++|.|.+ .+.|.+.+.|+|.. .+..+ .. +.+... ..+.+|.|.
T Consensus 6 ~~~p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 84 (259)
T 3omz_A 6 EGRTKSVIRQTGSSAEITCDL-AEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILR 84 (259)
T ss_dssp -----CEEEETTCCEEEECCC------CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEES
T ss_pred ccCCceeEecCCCcEEEEEEE-ccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEEC
Confidence 334456678899999999999 67788999999932 11000 00 011111 122359999
Q ss_pred eecccCCeeEEEEEEeeecCccccCceeeEEEccCCCcccc---------ccCCCCCCCCCcCCCCCCeEEEEEEecCC-
Q psy14896 630 ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL---------KFPNNFPKTFPEAPKAGDKVRLECVAFGY- 699 (813)
Q Consensus 630 ~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~---------~~p~~~~~~~~~~~~~G~~v~l~C~~~g~- 699 (813)
+++.+|+|.|.|.|.|..+..........|.|..++..... ..|.....+....+.+|++++|.|.+.+.
T Consensus 85 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~ 164 (259)
T 3omz_A 85 NLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSW 164 (259)
T ss_dssp SCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEECCC
T ss_pred CCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCCcc
Confidence 99999999999999987653212223356777654211100 00001112223568899999999999875
Q ss_pred CCCeEEEEeCCc--ccC------------CCceee------ecceEEEECCCCCCCCEEEEEEEEcC
Q psy14896 700 PVPSYNWTRRGS--PLP------------RNAYFE------NFNRILTIPNVKVEDQGEYICRASND 746 (813)
Q Consensus 700 P~p~i~W~k~g~--~l~------------~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~a~N~ 746 (813)
|.+.+.|+|++. .+. ...++. .....|+|.+++.+|+|.|.|.|.+.
T Consensus 165 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 165 WSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp SSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred CCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 788999999542 110 001111 12356999999999999999999864
No 389
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.67 E-value=3.3e-17 Score=157.95 Aligned_cols=160 Identities=13% Similarity=0.179 Sum_probs=96.7
Q ss_pred cccEEEEeeeccCC----CCeEEEeecccccccccccccccCCCccEEeeCCeEEEcC-----CccccCCeeEEEEeecC
Q psy14896 209 LNDITLSCYAGGYP----NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIND-----PRQVEDRGSYHCKASNK 279 (813)
Q Consensus 209 g~~v~l~C~~~g~P----~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~-----~~~~~d~G~Y~C~a~n~ 279 (813)
|++++|.|.+.|.| .+.|+|||+|.++..... .......+|.+.+.. ....+|+|.|+|.|.|.
T Consensus 18 G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~-------~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~ 90 (207)
T 1l6x_A 18 SRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKT-------KPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNK 90 (207)
T ss_dssp TSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEE-------CCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECT
T ss_pred CCceEEEEEEecccCCCCCeEEEEEECCccccCccc-------CCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcC
Confidence 37799999998865 349999999987632210 111122344443321 12344599999999998
Q ss_pred ceee-EeeeeEE--eeeeecccccCCCCceeecCCCeEEEecCCCCCCc-ceEEEeeccccccccCCccEEEccCccEEE
Q psy14896 280 FGSI-ISESVQL--AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSYDGALYF 355 (813)
Q Consensus 280 ~g~~-~s~~~~l--~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i 355 (813)
.+.. .+..+.+ .+..+|.+.+.........+..++|.|.+.+..|. ++|+|+|||.++......+.....+|++.+
T Consensus 91 ~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~ 170 (207)
T 1l6x_A 91 ALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFL 170 (207)
T ss_dssp TSSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEE
T ss_pred cCCcceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEE
Confidence 7753 1223322 33344444443333322345568999997544565 599999999875322222333455665444
Q ss_pred e------eeeecCCeeeEEEEeeecc
Q psy14896 356 S------ALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 356 ~------~v~~~D~G~Y~C~a~n~~g 375 (813)
. ....+|.|.|+|.|.|...
T Consensus 171 ~s~l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 171 YSKLTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp EEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred EEEEEECHHHcCCCCEEEEEEEcCCc
Confidence 3 3334579999999998764
No 390
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.67 E-value=8e-18 Score=163.64 Aligned_cols=158 Identities=14% Similarity=0.200 Sum_probs=103.0
Q ss_pred eccCCCceEEeCCCCCC---Cc-cEEEEccCCCCCcccC--------CCeEEEeeCccEEEEeecccCCeeEEEEEEeee
Q psy14896 580 GNQNWGKAMFCDPPTNY---PG-VNYYWARDYFPNFVEE--------DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKV 647 (813)
Q Consensus 580 ~~~g~~~~l~C~~~~~~---p~-~~v~W~k~~~~~~~~~--------~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 647 (813)
+.+|+.++|.|.+. +. |. +.|+|+|++.++.... +.++ ...++|.|.+++.+|+|.|+|.|.|..
T Consensus 23 v~~G~~v~L~C~~~-g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~--~~~~~L~I~~~~~~D~g~Y~C~~~~~~ 99 (218)
T 2rgs_A 23 LMISLTPKVTCVVV-DVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTI--RVVSTLPIQHQDWMSGKEFKCKVNNKD 99 (218)
T ss_dssp HCTTSCCEEEEEEE-EECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEE--EEEEEEECCHHHHHTTCCEEEEEEETT
T ss_pred hccCCCeeEEEEEc-CCccCCCceEEEEEECCccccCcccccccccCCCeE--EEEEEEEEcHHHcCCCCeEEEEEECCc
Confidence 67899999999994 55 43 8999999986532110 0111 123469999999999999999999987
Q ss_pred cCccccCceee--EEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecC-CCCC-eEEEEeCCcccCCCcee---e
Q psy14896 648 SDTGRNGPFFP--LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG-YPVP-SYNWTRRGSPLPRNAYF---E 720 (813)
Q Consensus 648 g~~~~~~~~~~--l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g-~P~p-~i~W~k~g~~l~~~~~~---~ 720 (813)
+..... ..+. +.+..+|.+... +. . ....+|+.++|.|.+.| .|+| .|+|+|||..+...... .
T Consensus 100 ~~~~~~-~~v~~~~~~~~~P~v~~~--~~-----~-~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~ 170 (218)
T 2rgs_A 100 LPSPIE-RTISKIKGLVRAPQVYIL--PP-----P-AEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVL 170 (218)
T ss_dssp CSSCEE-EEECCCCCCCBCCEEEEE--CC-----C-GGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEE
T ss_pred CCCcce-EEEeecCCCCCCCEEEEE--CC-----C-hHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEE
Confidence 643111 1111 133344433221 11 1 12235999999999998 5765 99999999987543211 1
Q ss_pred ecc------eEEEECCCCCCCCEEEEEEEEcCCCc
Q psy14896 721 NFN------RILTIPNVKVEDQGEYICRASNDRSA 749 (813)
Q Consensus 721 ~~~------~~L~i~~v~~~d~G~Y~C~a~N~~G~ 749 (813)
..+ +.|.|.....+|.|.|+|.|.|....
T Consensus 171 ~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 171 DSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp CTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred CCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 122 24566655566799999999998653
No 391
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.67 E-value=3.6e-16 Score=154.75 Aligned_cols=180 Identities=16% Similarity=0.184 Sum_probs=116.0
Q ss_pred CCCceeccCCCceEEeCCCCCC--CccEEEEccCC--CCC--cc------------c-CCCeEEEee-----CccEEEEe
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNY--PGVNYYWARDY--FPN--FV------------E-EDKRVFVSY-----DGALYFSA 630 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~--p~~~v~W~k~~--~~~--~~------------~-~~~~~~~~~-----~~~L~i~~ 630 (813)
+....+.+|+.++|.|.+ .+. +.+.|.|+|+. ... .+ . ...|+.+.. +.+|+|.+
T Consensus 8 p~~v~~~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (242)
T 1hxm_B 8 QISSTKTLSKTARLECVV-SGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHN 86 (242)
T ss_dssp CSEEEEETTCCEEEEEEE-ESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECS
T ss_pred CceEEecCCCcEEEEEEe-CCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECC
Confidence 344567889999999998 443 66889999953 211 00 0 345666653 23699999
Q ss_pred ecccCCeeEEEEEEeeec-C---ccccCceeeEEEccCCCcccc-ccCCCCCCCCCcCCCCCCeEEEEEEecCC-CC-Ce
Q psy14896 631 LEQIDAGNYSCNVQSKVS-D---TGRNGPFFPLKVFPHSNFQQL-KFPNNFPKTFPEAPKAGDKVRLECVAFGY-PV-PS 703 (813)
Q Consensus 631 ~~~~d~G~Y~C~a~n~~g-~---~~~~~~~~~l~v~~~p~~~~~-~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~-p~ 703 (813)
++.+|+|.|.|.+.|..+ . .........|.|...+..... ..+..+. .....+.+|+.++|.|.+.|. |. +.
T Consensus 87 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~-p~~~~~~~g~~v~L~C~~~g~~P~~~~ 165 (242)
T 1hxm_B 87 VEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFL-PSIAETKLQKAGTYLCLLEKFFPDVIK 165 (242)
T ss_dssp CCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCC-CCGGGGGSSSCEEEEEEEEEESSCCEE
T ss_pred CCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEEC-CChhhcccCCCceEEEEEeeEECCCeE
Confidence 999999999999998641 1 001112356777754321000 0011111 122346689999999999986 64 79
Q ss_pred EEEEeCCc-ccCCCc---eeee-----cceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEE
Q psy14896 704 YNWTRRGS-PLPRNA---YFEN-----FNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI 758 (813)
Q Consensus 704 i~W~k~g~-~l~~~~---~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 758 (813)
|+|+|+|. .+.... .... ..+.|.|..+.. | |.|+|.|.|..+.......|.+
T Consensus 166 v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 166 IHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp EEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred EEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 99999997 664331 1111 125799988775 5 9999999999987655555544
No 392
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.67 E-value=1.2e-16 Score=156.62 Aligned_cols=170 Identities=15% Similarity=0.225 Sum_probs=113.1
Q ss_pred CCceeccCCCceEEeCCCCCCCc----cEEEEccCC--CCCc--c------------cCCCeEEEee-----CccEEEEe
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYPG----VNYYWARDY--FPNF--V------------EEDKRVFVSY-----DGALYFSA 630 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p~----~~v~W~k~~--~~~~--~------------~~~~~~~~~~-----~~~L~i~~ 630 (813)
.+..+.+|+.++|.|.+ .+.|. +.|.|+|++ .... + ....|+.+.. +.+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~-~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 8 GPGLLKPSQTLSLTCSF-SGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp CCSEECTTCCEEEEEEE-ESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CceeecCCCeEEEEEEE-eCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 34567889999999999 66664 889999853 2210 0 0134666653 24699999
Q ss_pred ecccCCeeEEEEEEeeec------CccccCceeeEEEccC----CCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-
Q psy14896 631 LEQIDAGNYSCNVQSKVS------DTGRNGPFFPLKVFPH----SNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY- 699 (813)
Q Consensus 631 ~~~~d~G~Y~C~a~n~~g------~~~~~~~~~~l~v~~~----p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~- 699 (813)
++.+|+|.|.|.+.|..| ..........|.|... |.+.. .++ ...+.+|+.++|.|.+.|.
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~--~~~------~~~~~~g~~~~l~C~~~g~~ 158 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYP--LAP------VCGDTTGSSVTLGCLVKGYF 158 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEE--ECC-----------CCSEEEEEEEEEEEB
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEE--ecc------cccccCCCCEEEEEEEccEe
Confidence 999999999999999764 1001112256777642 22211 110 1235789999999999986
Q ss_pred CCC-eEEEEeCCcccCCCc--eee-----ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEE
Q psy14896 700 PVP-SYNWTRRGSPLPRNA--YFE-----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 755 (813)
Q Consensus 700 P~p-~i~W~k~g~~l~~~~--~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 755 (813)
|.| .|+|+|+|..+.... ... ...+.|+|..+..+| |.|+|.|.|..|.......
T Consensus 159 P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~~ 221 (228)
T 3bae_H 159 PEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDKK 221 (228)
T ss_dssp SSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred CCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEEE
Confidence 877 999999988653111 010 123569999998866 9999999999887655444
No 393
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.67 E-value=1.5e-16 Score=156.94 Aligned_cols=179 Identities=18% Similarity=0.222 Sum_probs=112.7
Q ss_pred ceeeCCCceeecCCCccccccEEEEeeeccCC-CC-eEEEeecc--cccccccc--cccccCCCccEEee----CCeEEE
Q psy14896 191 YFIKQPTDVVFDLSKRSILNDITLSCYAGGYP-NP-SYEWFKED--YVQDRLVA--NLIDPLSDKRFTLS----GGNLII 260 (813)
Q Consensus 191 ~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P-~p-~v~W~k~g--~~l~~~~~--~~~~~~~~~~~~~~----~~~l~i 260 (813)
.++. |..+.+.+| ++++|.|.+.+.| .+ .|.|||++ ..+..... .........++... +.+|.|
T Consensus 22 ~v~~-p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 95 (234)
T 2j6e_L 22 VLTQ-PPSASGTPG-----QRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAI 95 (234)
T ss_dssp CCBC-CSCCCBCTT-----CEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEE
T ss_pred EEeC-CCcEEeeCC-----CcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEE
Confidence 3444 666666666 7799999998754 34 79999974 22210000 00011122344433 236888
Q ss_pred cCCccccCCeeEEEEeecCce--eeEeeeeEEeeee----ecccccCCCCceeecCCCeEEEecCCCCCCc-ceEEEeec
Q psy14896 261 NDPRQVEDRGSYHCKASNKFG--SIISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARD 333 (813)
Q Consensus 261 ~~~~~~~d~G~Y~C~a~n~~g--~~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~v~W~k~ 333 (813)
.+. +.+|+|.|+|.|.|..+ ...+..+.|.|.. +|.+.+.........|+.++|.|.+.+..|+ +.++|+||
T Consensus 96 ~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~ 174 (234)
T 2j6e_L 96 SGL-RSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKAD 174 (234)
T ss_dssp ESC-CSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEET
T ss_pred CCC-CHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEEC
Confidence 885 89999999999999877 2334456666632 3333333333334457788999997655565 59999999
Q ss_pred cccccccCC-ccEEEccC------ccEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 334 YFPNFVEED-KRVFVSYD------GALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 334 ~~~~~~~~~-~~~~~~~~------~~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
|+++..... .......+ +.|.|..+..+|+|.|+|.|.|..+.
T Consensus 175 g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 224 (234)
T 2j6e_L 175 GAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST 224 (234)
T ss_dssp TEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBC
T ss_pred CEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCc
Confidence 987532110 00111122 35889999999999999999997653
No 394
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.67 E-value=9.2e-16 Score=155.69 Aligned_cols=190 Identities=17% Similarity=0.191 Sum_probs=120.9
Q ss_pred eeeCCCceeecCCCccccccEEEEeeeccCC--CCeEEEeeccc--ccccccc-------cccccCCCccEEee------
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKEDY--VQDRLVA-------NLIDPLSDKRFTLS------ 254 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g~--~l~~~~~-------~~~~~~~~~~~~~~------ 254 (813)
+...|....+.+| ++|+|.|.+.|.| .+.|.|||++. .+..... .........|+...
T Consensus 29 ~~~~p~~~~v~~G-----~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 103 (282)
T 1qok_A 29 KLQQSGAELVRSG-----TSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSN 103 (282)
T ss_dssp EEEECCCEEEETT-----CCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTT
T ss_pred EEECCCCEEEeCC-----CeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCC
Confidence 3445667777776 7799999998875 68999999752 1110000 00011123455543
Q ss_pred CCeEEEcCCccccCCeeEEEEeecCcee----eEeeeeEEeeeeec-------------cccc--CCCCceeecCCCeEE
Q psy14896 255 GGNLIINDPRQVEDRGSYHCKASNKFGS----IISESVQLAFGFIG-------------EFNL--KRAPEIGNQNWGKAM 315 (813)
Q Consensus 255 ~~~l~i~~~~~~~d~G~Y~C~a~n~~g~----~~s~~~~l~v~~~~-------------~~~~--~~~~~~~~~~~~~~l 315 (813)
..+|.|.+. +.+|+|.|+|.|.|..|. ..+..+.|.|...+ ++.+ .+....+.+|+.++|
T Consensus 104 ~~sL~I~~v-~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L 182 (282)
T 1qok_A 104 TAYLQLSSL-TSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTI 182 (282)
T ss_dssp EEEEEECSC-CGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEE
T ss_pred eEEEEECcC-ChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEE
Confidence 146888885 899999999999998761 22345667776543 1111 233456788999999
Q ss_pred EecCCCCCCcceEEEee--ccccccc----------cCCccEEEcc---CccEEEeeeeecCCeeeEEEEeeeccccCCC
Q psy14896 316 FCDPPTNYPGVNYYWAR--DYFPNFV----------EEDKRVFVSY---DGALYFSALEQIDAGNYSCNVQSKVSDTGRN 380 (813)
Q Consensus 316 ~C~~~~~~p~~~v~W~k--~~~~~~~----------~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 380 (813)
.|.+ .+.| +.+.|+| +|..+.. ....|+.... ..+|.|.++..+|+|.|+|.|.|... ...
T Consensus 183 ~C~~-~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~--~~f 258 (282)
T 1qok_A 183 TCSA-SSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYP--LTF 258 (282)
T ss_dssp EEEE-SSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS--CEE
T ss_pred EEEe-cCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCC--ceE
Confidence 9996 5667 8999999 5654311 1134554432 33799999999999999999987432 222
Q ss_pred CCceeeEEccC
Q psy14896 381 GPFFPLKVFPH 391 (813)
Q Consensus 381 s~~~~l~v~~~ 391 (813)
+....|.|...
T Consensus 259 g~gt~l~V~~~ 269 (282)
T 1qok_A 259 GAGTKLELKRA 269 (282)
T ss_dssp CCCEEEEEC--
T ss_pred eCCEEEEEecc
Confidence 34467777543
No 395
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.67 E-value=2.2e-14 Score=166.59 Aligned_cols=346 Identities=13% Similarity=0.037 Sum_probs=191.2
Q ss_pred CCeEEEecCCCCCCcceEEEeeccccccccCCccEEEccCccEEEeeeeec-CCeeeEEEEeeeccccCCCCCceeeEEc
Q psy14896 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQI-DAGNYSCNVQSKVSDTGRNGPFFPLKVF 389 (813)
Q Consensus 311 ~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~v~~~-D~G~Y~C~a~n~~g~~~~~s~~~~l~v~ 389 (813)
..+.|.|.+ .|.|.+++.|.|+|..+..-... .|.|..+... .++.|.|.+.|..|..... .+.+.+.
T Consensus 92 g~l~v~c~~-~g~P~p~i~W~k~g~~~~~~~~~--------~~~i~~~~~~~~~l~~~~va~~~~G~~~~~--~v~~~~~ 160 (731)
T 2v5y_A 92 GLLNVYVKV-NNGPLGNPIWNISGDPTRTWNRA--------ELAISTFWPNFYQVIFEVITSGHQGYLAID--EVKVLGH 160 (731)
T ss_dssp EEEEEEEEE-TTCCCCSEEEEECCCCCSSCEEE--------EEEECCCTTSCEEEEEEEEECSSCCEEEEC--CBEEESS
T ss_pred ceEEEEEec-CCCCccceeEEEeCCcCCceeEE--------EEEEeecCCCceEEEEEEEecCCceEEEEe--eEEeeec
Confidence 355888985 78899999999999874221222 2333332111 2245555554444432111 1122211
Q ss_pred cCCcccccccCCCCCCCCCcCCCCCCcEEEEEEEeecCCCeee-Ee--ecCCcCCCCceeccccceEEEcccccccceEE
Q psy14896 390 PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYN-WT--RRGSPLPRNAYFENFNRILTIPNVKMRGPYFI 466 (813)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~-W~--~~~~~l~~~~~~~~~~~~l~i~~~~~~g~y~~ 466 (813)
.. ..+|.+ .......+.+|+.+.|.|.+.|.|.|.+. |+ +++..+.....
T Consensus 161 ~~-----~~~p~~-~~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~--------------------- 213 (731)
T 2v5y_A 161 PC-----TRTPHF-LRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEI--------------------- 213 (731)
T ss_dssp CC-----SSSCEE-CCCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEE---------------------
T ss_pred cc-----cccccc-ccccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccce---------------------
Confidence 00 011111 12234568888888899988888888877 76 45544421100
Q ss_pred eCCCceEecccccccccCeEEEEEeeccCCCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEE
Q psy14896 467 KQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYH 546 (813)
Q Consensus 467 ~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~ 546 (813)
......+ ..++|.|.++ ...|+|.|+
T Consensus 214 --------------------------------------------------~~~~~~~---~~~~l~I~~~-~~~d~g~Y~ 239 (731)
T 2v5y_A 214 --------------------------------------------------KVTSSRR---FIASFNVVNT-TKRDAGKYR 239 (731)
T ss_dssp --------------------------------------------------EECCSSE---EEEEEEECSC-CTTTCEEEE
T ss_pred --------------------------------------------------EEecccc---ceEEEEEccc-ccccCeEEE
Confidence 0000011 1268999997 999999999
Q ss_pred EEEEcCceeEEeecEEEEEeecccccccCCCceeccCCCceEEeCCCC--C-CCc--cEEEEccCCCCCcccCCCeEEEe
Q psy14896 547 CKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPT--N-YPG--VNYYWARDYFPNFVEEDKRVFVS 621 (813)
Q Consensus 547 C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~--~-~p~--~~v~W~k~~~~~~~~~~~~~~~~ 621 (813)
|.|.|..|...+..+.|.|..+|.+...+... ......+.|.|..+. + .|. -.|.|.+.+.. .......
T Consensus 240 c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~-~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~-----~~~~~~~ 313 (731)
T 2v5y_A 240 CMIRTEGGVGISNYAELVVKEPPVPIAPPQLA-SVGATYLWIQLNANSINGDGPIVAREVEYCTASGS-----WNDRQPV 313 (731)
T ss_dssp EEEEETTEEEECCCEEEEEECCCCBSSCCEEE-EECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSS-----CEEEEEC
T ss_pred EEEECCCCCcceeeEEEEEecCCCCCCCccee-ccCCceEEEEeCCcccCCCCccEEEEEEEEECCCC-----ceEEecc
Confidence 99999999865777888888777643322221 233456789998732 2 121 25667654321 1122333
Q ss_pred eCccEEEEeecccCCeeEEEEEE--eeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC
Q psy14896 622 YDGALYFSALEQIDAGNYSCNVQ--SKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY 699 (813)
Q Consensus 622 ~~~~L~i~~~~~~d~G~Y~C~a~--n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~ 699 (813)
...++.|.++.+.+.+.|+|.|. |..|....+.. +.+...+.. |...+............+.|.......
T Consensus 314 ~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~---~~~~t~~~~-----p~~~P~~~~~~~~~~~sv~l~W~~p~~ 385 (731)
T 2v5y_A 314 DSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPA---LRTRTKCAD-----PMRGPRKLEVVEVKSRQITIRWEPFGY 385 (731)
T ss_dssp CSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCC---EEEECCCCC-----CSCCCEEEEEEEECSSCEEEEEECCCH
T ss_pred CcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCc---EEeeecCCC-----CCCCCceeEEEeccCCeEEEEEECCCc
Confidence 44669999999999999999999 99987543321 233222110 100000000111233455666554211
Q ss_pred C-------CCeEEEEeCCcccCC-----CceeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCc
Q psy14896 700 P-------VPSYNWTRRGSPLPR-----NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPN 763 (813)
Q Consensus 700 P-------~p~i~W~k~g~~l~~-----~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~ 763 (813)
+ .-.|.|...+..... ..........++|.++.......|++.|.|..|... +..+.+.-++.
T Consensus 386 ~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~ 460 (731)
T 2v5y_A 386 NVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDED 460 (731)
T ss_dssp HHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECCCC
T ss_pred ccccceeeeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEccCC
Confidence 1 013444433210000 001112345789999999999999999999999753 55566654433
No 396
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.66 E-value=2.1e-16 Score=154.35 Aligned_cols=174 Identities=16% Similarity=0.195 Sum_probs=109.8
Q ss_pred CCceeecCCCccccccEEEEeeeccCC--CCeEEEeecc--ccccccc---------ccccccCCCccEEee------CC
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLV---------ANLIDPLSDKRFTLS------GG 256 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g--~~l~~~~---------~~~~~~~~~~~~~~~------~~ 256 (813)
|..+.+.+| ++++|.|.+.+.| .+.|.|||++ ..+.... ..........|+.+. +.
T Consensus 7 p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 81 (222)
T 1q9r_B 7 SGGGLVQSG-----GSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSIL 81 (222)
T ss_dssp ECCCEECTT-----CCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEE
T ss_pred CCceeEcCC-----CEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeE
Confidence 344556555 7799999998866 7899999964 2111000 000111123455543 23
Q ss_pred eEEEcCCccccCCeeEEEEeecCcee----eEeeeeEEeeee----ecccccCCCCceeecCCCeEEEecCCCCCCcc-e
Q psy14896 257 NLIINDPRQVEDRGSYHCKASNKFGS----IISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-N 327 (813)
Q Consensus 257 ~l~i~~~~~~~d~G~Y~C~a~n~~g~----~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~ 327 (813)
+|.|.+. +.+|+|.|.|.|.|..|. .....+.|.|.. .|.+.+......+.+|+.++|.|.+.+..|.| .
T Consensus 82 ~L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~ 160 (222)
T 1q9r_B 82 YLQMNTL-RAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVT 160 (222)
T ss_dssp EEEECSC-CGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCE
T ss_pred EEEECcC-CcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCE
Confidence 6888885 899999999999987641 112345566643 22232222233456788899999975445888 9
Q ss_pred EEEeeccccccccCCccEE----EccCccEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 328 YYWARDYFPNFVEEDKRVF----VSYDGALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 328 v~W~k~~~~~~~~~~~~~~----~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
++|+++|..+......... ....+.|.|.++..+| |.|+|.|.|..|.
T Consensus 161 v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~ 212 (222)
T 1q9r_B 161 VTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASS 212 (222)
T ss_dssp EEEGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred EEEecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCC
Confidence 9999999875321111110 0112368899998899 9999999998875
No 397
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.66 E-value=6.5e-17 Score=159.07 Aligned_cols=178 Identities=15% Similarity=0.211 Sum_probs=108.7
Q ss_pred ceeeCCCcee-ecCCCccccccEEEEeeeccC---CCC-eEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcc
Q psy14896 191 YFIKQPTDVV-FDLSKRSILNDITLSCYAGGY---PNP-SYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQ 265 (813)
Q Consensus 191 ~~~~~p~~~~-v~~g~~~~g~~v~l~C~~~g~---P~p-~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 265 (813)
+|+..|.... +.+| ++++|.|.+.|. |.+ .|+|||++.++............+.++. ...+|.|.+ ++
T Consensus 18 v~~~pp~~~~~v~~G-----~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~-~~s~L~I~~-~~ 90 (239)
T 1i1c_A 18 VFIFPPKTKDVLGGG-----LTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLR-SVSELPIVE-RD 90 (239)
T ss_dssp EEEECCCHHHHTTSS-----SCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEE-EEEEEECCH-HH
T ss_pred EEEECCChHHhcccC-----CcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEE-EEEEEEEEh-hH
Confidence 3444343332 5555 779999999886 876 9999999976532211000001122222 134577755 58
Q ss_pred ccCCeeEEEEeecCceee-EeeeeEE--eeeeecccccCCCCceeecCCCeEEEecCCCCCCc-ceEEEeeccccccccC
Q psy14896 266 VEDRGSYHCKASNKFGSI-ISESVQL--AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEE 341 (813)
Q Consensus 266 ~~d~G~Y~C~a~n~~g~~-~s~~~~l--~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~v~W~k~~~~~~~~~ 341 (813)
.+|+|.|+|.|.|..+.. ....+.+ .+..+|.+.+.........|+.++|.|.+.+..|. .+|+|+|||+++....
T Consensus 91 ~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~ 170 (239)
T 1i1c_A 91 WLNGKTFKCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYK 170 (239)
T ss_dssp HHTTCCEEEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEE
T ss_pred ccCCCeEEEEEecccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCce
Confidence 999999999999988753 2223333 33444555444433333346778999997544666 5999999998753222
Q ss_pred CccEEEccCccEEEee---eee---cCCeeeEEEEeeecc
Q psy14896 342 DKRVFVSYDGALYFSA---LEQ---IDAGNYSCNVQSKVS 375 (813)
Q Consensus 342 ~~~~~~~~~~~L~i~~---v~~---~D~G~Y~C~a~n~~g 375 (813)
..+.....+|++.+.. +.. +|.|.|+|.|.|...
T Consensus 171 ~~~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l 210 (239)
T 1i1c_A 171 NTPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGL 210 (239)
T ss_dssp ECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred ecCceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCC
Confidence 2233345666554432 233 468999999998764
No 398
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.66 E-value=5.5e-16 Score=152.17 Aligned_cols=177 Identities=16% Similarity=0.209 Sum_probs=112.2
Q ss_pred CceeccCCCceEEeCCCCCCC--ccEEEEccCC--CCCc-c-------------cCCCeEEEeeC---c--cEEEEeecc
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYP--GVNYYWARDY--FPNF-V-------------EEDKRVFVSYD---G--ALYFSALEQ 633 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~--~~~~-~-------------~~~~~~~~~~~---~--~L~i~~~~~ 633 (813)
+..+.+|+.++|.|.+ .+.+ .+.+.|||.. .... + ....|+.+..+ + +|+|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (232)
T 1dn0_B 9 AGLLKPSETLSLTCAV-YGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTA 87 (232)
T ss_dssp CCEECTTSCEEEEEEE-ESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEeCCCcEEEEEEE-ccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCc
Confidence 4567889999999998 4543 5789999853 2110 0 01356666532 2 699999999
Q ss_pred cCCeeEEEEEEeee--cCc-cccCceeeEEEccCC-CccccccCCCCCCCCCcCCCCC-CeEEEEEEecCC-CCC-eEEE
Q psy14896 634 IDAGNYSCNVQSKV--SDT-GRNGPFFPLKVFPHS-NFQQLKFPNNFPKTFPEAPKAG-DKVRLECVAFGY-PVP-SYNW 706 (813)
Q Consensus 634 ~d~G~Y~C~a~n~~--g~~-~~~~~~~~l~v~~~p-~~~~~~~p~~~~~~~~~~~~~G-~~v~l~C~~~g~-P~p-~i~W 706 (813)
+|+|.|.|.+.+.. +.. ........|.|...+ ....+.. ......+..| +.++|.|.+.|. |.| .|+|
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~-----~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W 162 (232)
T 1dn0_B 88 ADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFP-----LVSCENSPSDTSSVAVGCLAQDFLPDSITFSW 162 (232)
T ss_dssp GGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEE-----EECC------CCSEEEEEEEEEEBSSCCEEEE
T ss_pred ccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEE-----eccccccCCCCCcEEEEEEEEEEeCCCeEEEE
Confidence 99999999998421 110 011122567887521 1111110 0001234578 999999999986 876 9999
Q ss_pred Ee-CCcccCCCc--------eeeecceEEEECCCCC--CCCEEEEEEEEcCCCceEEEEEEEEE
Q psy14896 707 TR-RGSPLPRNA--------YFENFNRILTIPNVKV--EDQGEYICRASNDRSALESSVTISIQ 759 (813)
Q Consensus 707 ~k-~g~~l~~~~--------~~~~~~~~L~i~~v~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~ 759 (813)
++ ||..+.... ......+.|+|..... +|.|.|+|.|.|..|.......|.|.
T Consensus 163 ~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 163 KYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVI 226 (232)
T ss_dssp EETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC-
T ss_pred EcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCC
Confidence 99 998875410 0011135799999887 89999999999999987666665544
No 399
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.66 E-value=1.6e-15 Score=151.74 Aligned_cols=192 Identities=15% Similarity=0.167 Sum_probs=118.1
Q ss_pred ceeeCCCceeecCCCccccccEEEEeeeccC--CCCeEEEeecc--ccccccc------ccccccCCCccEEee------
Q psy14896 191 YFIKQPTDVVFDLSKRSILNDITLSCYAGGY--PNPSYEWFKED--YVQDRLV------ANLIDPLSDKRFTLS------ 254 (813)
Q Consensus 191 ~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~--P~p~v~W~k~g--~~l~~~~------~~~~~~~~~~~~~~~------ 254 (813)
+.+..|....+.+| ++|+|.|.+.+. |.+.|.|||.. ..+.... ..........++.+.
T Consensus 10 v~~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 84 (257)
T 3gkz_A 10 VQLQESGPSLVKPS-----QTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKN 84 (257)
T ss_dssp EEEEEECCSEECTT-----CCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGT
T ss_pred EEEECCCCeEEcCC-----CcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCc
Confidence 34444566667666 779999999884 57899999953 2111000 001111223455543
Q ss_pred CCeEEEcCCccccCCeeEEEEeecCc---eeeEeeeeEEeeeee--------------cccccCCCCceeecCCCeEEEe
Q psy14896 255 GGNLIINDPRQVEDRGSYHCKASNKF---GSIISESVQLAFGFI--------------GEFNLKRAPEIGNQNWGKAMFC 317 (813)
Q Consensus 255 ~~~l~i~~~~~~~d~G~Y~C~a~n~~---g~~~s~~~~l~v~~~--------------~~~~~~~~~~~~~~~~~~~l~C 317 (813)
..+|.|.+. +.+|+|.|+|.|.|.. ....+..+.|.|... +.+...+....+.+|+.++|.|
T Consensus 85 ~~~L~I~~v-~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C 163 (257)
T 3gkz_A 85 QVYLQLKSV-SSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTC 163 (257)
T ss_dssp EEEEEECSC-CGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEE
T ss_pred eEEEEECCC-ChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEE
Confidence 125888875 8999999999999862 112244566777654 2222233446778999999999
Q ss_pred cCCCCCCcc-eEEEeec--cccccc----------cCCccEEEccC---ccEEEeeeeecCCeeeEEEEeeeccccCCCC
Q psy14896 318 DPPTNYPGV-NYYWARD--YFPNFV----------EEDKRVFVSYD---GALYFSALEQIDAGNYSCNVQSKVSDTGRNG 381 (813)
Q Consensus 318 ~~~~~~p~~-~v~W~k~--~~~~~~----------~~~~~~~~~~~---~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s 381 (813)
.+. +.|.+ .+.|+|. +..... ....|+..... .+|.|.+++.+|+|.|+|.|.+... ...+
T Consensus 164 ~~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~--~~fg 240 (257)
T 3gkz_A 164 SAS-SSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFP--FTFG 240 (257)
T ss_dssp EES-SCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS--CEEC
T ss_pred EEc-cCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCc--eEEc
Confidence 964 45665 9999984 332110 01234443322 2699999999999999999987432 2223
Q ss_pred CceeeEEccC
Q psy14896 382 PFFPLKVFPH 391 (813)
Q Consensus 382 ~~~~l~v~~~ 391 (813)
....|.|...
T Consensus 241 ~gt~l~v~~~ 250 (257)
T 3gkz_A 241 SGTKLEIKRA 250 (257)
T ss_dssp CCEEEEECCC
T ss_pred CCEEEEEEeC
Confidence 3466777544
No 400
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.66 E-value=1.7e-15 Score=151.65 Aligned_cols=172 Identities=19% Similarity=0.257 Sum_probs=109.6
Q ss_pred CCCceeecCCCccccccEEEEeeeccC--CCCeEEEeecc--cccccccc--cccccCCCccEEee----CCeEEEcCCc
Q psy14896 195 QPTDVVFDLSKRSILNDITLSCYAGGY--PNPSYEWFKED--YVQDRLVA--NLIDPLSDKRFTLS----GGNLIINDPR 264 (813)
Q Consensus 195 ~p~~~~v~~g~~~~g~~v~l~C~~~g~--P~p~v~W~k~g--~~l~~~~~--~~~~~~~~~~~~~~----~~~l~i~~~~ 264 (813)
.|..+.+.+| ++|+|.|.+.+. |.+.+.|||++ ..+..... .........++... ..+|.|.+.
T Consensus 8 ~p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v- 81 (256)
T 3ux9_B 8 QPPSVSGAPG-----QRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGL- 81 (256)
T ss_dssp CCSEEEECTT-----CCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSC-
T ss_pred cCCcEEEcCC-----CcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCC-
Confidence 3455666666 779999999886 78899999964 21110000 00001122344443 125888885
Q ss_pred cccCCeeEEEEeecCcee--eEeeeeEEeeeeecc--------------------cccCCCCceeecCCCeEEEecCCCC
Q psy14896 265 QVEDRGSYHCKASNKFGS--IISESVQLAFGFIGE--------------------FNLKRAPEIGNQNWGKAMFCDPPTN 322 (813)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~--~~s~~~~l~v~~~~~--------------------~~~~~~~~~~~~~~~~~l~C~~~~~ 322 (813)
+.+|+|.|+|.|.|..+. ..+..+.|.|...+. .........+.+|+.++|.|.+ .+
T Consensus 82 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~~ 160 (256)
T 3ux9_B 82 QSEDEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAA-SG 160 (256)
T ss_dssp CGGGCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEE-ES
T ss_pred ChhhCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEE-eC
Confidence 899999999999986542 224456677765442 1112334567889999999996 44
Q ss_pred CC--cceEEEeecc--cccc----c-----------cCCccEEEccCc-----cEEEeeeeecCCeeeEEEEeee
Q psy14896 323 YP--GVNYYWARDY--FPNF----V-----------EEDKRVFVSYDG-----ALYFSALEQIDAGNYSCNVQSK 373 (813)
Q Consensus 323 ~p--~~~v~W~k~~--~~~~----~-----------~~~~~~~~~~~~-----~L~i~~v~~~D~G~Y~C~a~n~ 373 (813)
.| .+.+.|+|++ ..+. + ....|+.+..++ +|.|.+++.+|+|.|+|.|.|.
T Consensus 161 ~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 235 (256)
T 3ux9_B 161 FTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYID 235 (256)
T ss_dssp SCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcC
Confidence 44 7899999973 2210 0 112355554332 4999999999999999999985
No 401
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.66 E-value=4.3e-16 Score=156.25 Aligned_cols=168 Identities=17% Similarity=0.183 Sum_probs=110.2
Q ss_pred CCceeccCCCceEEeCCCCCCC------ccEEEEccCC--CCCc--c--------cCCCeEEEeeC---ccEEEEeeccc
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYP------GVNYYWARDY--FPNF--V--------EEDKRVFVSYD---GALYFSALEQI 634 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p------~~~v~W~k~~--~~~~--~--------~~~~~~~~~~~---~~L~i~~~~~~ 634 (813)
....+.+|+.++|.|.+ .+.| .+.|.|+|+. .... + ....|+.+..+ .+|+|.+++.+
T Consensus 13 ~~v~v~~G~~v~L~C~~-~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 91 (264)
T 2gjj_A 13 SSLPVSVGEKVTMTCKS-SQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKAE 91 (264)
T ss_dssp SEEEEETTCCEEEEEEE-SSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeEEecCCCcEEEEeEc-CCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCHH
Confidence 34567889999999998 5666 6889999963 2211 1 11356665533 36999999999
Q ss_pred CCeeEEEEEEeeecCccccCceeeEEEccCCCc----------cccccCCC-CCCCCCcCCCCCCeEEEEEEecCCCC--
Q psy14896 635 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----------QQLKFPNN-FPKTFPEAPKAGDKVRLECVAFGYPV-- 701 (813)
Q Consensus 635 d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~----------~~~~~p~~-~~~~~~~~~~~G~~v~l~C~~~g~P~-- 701 (813)
|+|.|.|.|.|..+... .....|.|..+|.. .....|.. +.......+.+|++++|.|.+.+.|.
T Consensus 92 DsG~Y~C~~~~~~~~~~--~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~ 169 (264)
T 2gjj_A 92 DLAVYYCQQYSNYPWTF--GGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASGYSFTG 169 (264)
T ss_dssp GCEEEEEEECSSSSCEE--CCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEESSCGGG
T ss_pred HCEEEEEEEecCCccEe--cCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeCCccCC
Confidence 99999999998754211 12246777765420 00000000 00111235889999999999998874
Q ss_pred CeEEEEeCC--cccC-------C----------Cceee------ecceEEEECCCCCCCCEEEEEEEEcC
Q psy14896 702 PSYNWTRRG--SPLP-------R----------NAYFE------NFNRILTIPNVKVEDQGEYICRASND 746 (813)
Q Consensus 702 p~i~W~k~g--~~l~-------~----------~~~~~------~~~~~L~i~~v~~~d~G~Y~C~a~N~ 746 (813)
+.|.|+|+. ..+. . ..++. ....+|+|.+++.+|+|.|.|.|.|.
T Consensus 170 ~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 170 YFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp SEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred eEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 799999973 3211 0 11111 12458999999999999999999995
No 402
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.66 E-value=4.1e-16 Score=150.84 Aligned_cols=172 Identities=14% Similarity=0.185 Sum_probs=109.3
Q ss_pred CCceeecCCCccccccEEEEeeeccCC--CCeEEEeecc--cccccccc------cccccCCCccEEee---C---CeEE
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA------NLIDPLSDKRFTLS---G---GNLI 259 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g--~~l~~~~~------~~~~~~~~~~~~~~---~---~~l~ 259 (813)
|....+.+| ++++|.|.+.+.| .+.|.|||++ ..+..... .........|+.+. . .+|.
T Consensus 7 p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 81 (210)
T 3d9a_H 7 SGPSLVKPS-----QTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLD 81 (210)
T ss_dssp ESCSEECTT-----SCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEE
T ss_pred CCCEEecCC-----CcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEE
Confidence 455566566 7799999999875 4899999974 22110000 00011123455543 1 2788
Q ss_pred EcCCccccCCeeEEEEeecCceeeEeeeeEEeeee----ecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEEeecc
Q psy14896 260 INDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDY 334 (813)
Q Consensus 260 i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~k~~ 334 (813)
|.+. +.+|+|.|+|.|.|.. .....+.|.|.. +|.+........+..|+.++|.|.+.+..|.+ .++|++++
T Consensus 82 I~~v-~~~D~G~Y~C~~~~~~--~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 158 (210)
T 3d9a_H 82 LNSV-TTEDTATYYCANWDGD--YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 158 (210)
T ss_dssp ECSC-CGGGCEEEEEEETTSS--CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred ECCC-CcccCEEEEEEEecCc--ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCC
Confidence 8885 8999999999999864 112335566542 22333223334456788899999975445887 99999999
Q ss_pred ccccccCCccEEEc----cCccEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 335 FPNFVEEDKRVFVS----YDGALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 335 ~~~~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
.++.......+... ..+.|.|..+..+| |.|+|.|.|..|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 203 (210)
T 3d9a_H 159 LSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASS 203 (210)
T ss_dssp BCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGT
T ss_pred cccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCC
Confidence 86432222222211 12358898888877 9999999998875
No 403
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.66 E-value=2.6e-16 Score=158.56 Aligned_cols=169 Identities=19% Similarity=0.209 Sum_probs=106.8
Q ss_pred CCCceeccCCCceEEeCCCCCCC-----ccEEEEccCC--CCCc--c--------cCCCeEEEeeC---ccEEEEeeccc
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYP-----GVNYYWARDY--FPNF--V--------EEDKRVFVSYD---GALYFSALEQI 634 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p-----~~~v~W~k~~--~~~~--~--------~~~~~~~~~~~---~~L~i~~~~~~ 634 (813)
+....+.+|+.++|.|.+ .+.+ .+.|.|+|++ .... + ....|+.+..+ .+|+|.+++.+
T Consensus 22 p~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 100 (268)
T 1x9q_A 22 PLSLPVSLGDQASISCRS-SQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAE 100 (268)
T ss_dssp CSEECCCTTCCEEEEEEE-SSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred CCeEEecCCCCEEEEeEe-cCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChh
Confidence 344567889999999998 5665 5899999864 2110 0 02356665533 36999999999
Q ss_pred CCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCC---------------CCCCCCCcCCCCCCeEEEEEEecCC
Q psy14896 635 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN---------------NFPKTFPEAPKAGDKVRLECVAFGY 699 (813)
Q Consensus 635 d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~---------------~~~~~~~~~~~~G~~v~l~C~~~g~ 699 (813)
|+|.|.|.|.|..+.... ....|.|...+.......|+ .........+.+|++++|.|.+.|.
T Consensus 101 DsG~Y~C~~~~~~~~~~~--~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~ 178 (268)
T 1x9q_A 101 DLGVYFCSQSTHVPWTFG--GGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVTSGF 178 (268)
T ss_dssp GCEEEEEEECSSSSCEEC--CCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEEEESS
T ss_pred HCEEEEEEEecCCCceEc--CCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEecCc
Confidence 999999999987542111 12456665543210000000 0001123568899999999999988
Q ss_pred CC--CeEEEEeC--CcccC-------------------CCceeee------cceEEEECCCCCCCCEEEEEEEEcC
Q psy14896 700 PV--PSYNWTRR--GSPLP-------------------RNAYFEN------FNRILTIPNVKVEDQGEYICRASND 746 (813)
Q Consensus 700 P~--p~i~W~k~--g~~l~-------------------~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~a~N~ 746 (813)
|+ +.+.|+|+ |..+. ...++.. ...+|+|.+++.+|+|.|.|.|.|.
T Consensus 179 ~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 179 TFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp CGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 74 79999996 33210 1112211 1357999999999999999999984
No 404
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.65 E-value=3.2e-16 Score=177.33 Aligned_cols=163 Identities=17% Similarity=0.251 Sum_probs=120.0
Q ss_pred ceeccCCCceEEeCCCCCCCccEEEEccCCCCCccc----------CCCeEEEeeCccEEEEeecccCCeeEEEEEEeee
Q psy14896 578 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE----------EDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKV 647 (813)
Q Consensus 578 ~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~~~----------~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 647 (813)
..+.+|+.++|.|.+..+.|.+.|+|+|++.+..+. ...+..+..+++|.|.+++.+|+|.|+|.|.|..
T Consensus 376 ~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~ 455 (581)
T 3o3u_N 376 ITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMNRN 455 (581)
T ss_dssp EEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEECTT
T ss_pred cceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEcCC
Confidence 456789999999998667899999999997643211 1345667778899999999999999999999988
Q ss_pred cCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCC-eEEEEEEecC-CCCCeEEEEeCCcccCCCc-ee-----
Q psy14896 648 SDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD-KVRLECVAFG-YPVPSYNWTRRGSPLPRNA-YF----- 719 (813)
Q Consensus 648 g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~-~v~l~C~~~g-~P~p~i~W~k~g~~l~~~~-~~----- 719 (813)
|... ...+.|.|..+|....+..+. ..+.+|+ .+.|.|.+.| .|.|.|+|+|||.+|.... .+
T Consensus 456 ~~~~--~~~~~l~V~~~~~~p~i~~~~-------~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~ 526 (581)
T 3o3u_N 456 GKET--KSNYRVRVYQIPGKPEIVDSA-------SELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQ 526 (581)
T ss_dssp SCEE--EEEEEEEEEBCCCCCEEESCC-------SEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEE
T ss_pred Ccee--EEEEEEEEEcCCCCCEEEcCC-------cccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEee
Confidence 7542 234778888766544432221 2244454 4567999998 6999999999999886432 11
Q ss_pred --e-------ecceEEEECCCCC-CCCEEEEEEEEcCCCc
Q psy14896 720 --E-------NFNRILTIPNVKV-EDQGEYICRASNDRSA 749 (813)
Q Consensus 720 --~-------~~~~~L~i~~v~~-~d~G~Y~C~a~N~~G~ 749 (813)
. ...++|+|..++. +|.|.|+|.|+|.++.
T Consensus 527 ~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 527 TRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp EEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred eEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 0 0135799999994 4588999999999754
No 405
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.65 E-value=6.9e-16 Score=150.85 Aligned_cols=172 Identities=16% Similarity=0.173 Sum_probs=110.1
Q ss_pred CCceeecCCCccccccEEEEeeeccCC--CCeEEEeecc--cccccccc-------cccccCCCccEEee------CCeE
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------GGNL 258 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g--~~l~~~~~-------~~~~~~~~~~~~~~------~~~l 258 (813)
|....+.+| ++++|.|.+.+.| .+.|.|||+. ..+..... .........|+.+. +.+|
T Consensus 7 p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 81 (225)
T 1op3_H 7 SGGGLVKAG-----GSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYL 81 (225)
T ss_dssp ECCEEEETT-----CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEE
T ss_pred CCCeEecCC-----CCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEE
Confidence 444566666 7799999999877 7899999974 22210000 00011223455543 2468
Q ss_pred EEcCCccccCCeeEEEEeecCce-----e--eEeeeeEEeeeee----cccccCCCCceeecCCCeEEEecCCCCCCcc-
Q psy14896 259 IINDPRQVEDRGSYHCKASNKFG-----S--IISESVQLAFGFI----GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV- 326 (813)
Q Consensus 259 ~i~~~~~~~d~G~Y~C~a~n~~g-----~--~~s~~~~l~v~~~----~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~- 326 (813)
.|.+. +.+|+|.|.|.|.|..| . .....+.|.|... |.+........+..|+.++|.|.+.+..|.+
T Consensus 82 ~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~ 160 (225)
T 1op3_H 82 QMHKM-RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 160 (225)
T ss_dssp EECSC-CGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCC
T ss_pred EECCC-ChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCe
Confidence 88885 89999999999999764 2 2234567777642 2222222222346788899999975445776
Q ss_pred eEEEeeccccccccCCccEEEccCc------cEEEeeeeecCCeeeEEEEeeecc
Q psy14896 327 NYYWARDYFPNFVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 327 ~v~W~k~~~~~~~~~~~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g 375 (813)
.|+|+|++.++........ ...++ .|.|.++..+| |.|+|.|.|..+
T Consensus 161 ~v~W~~~~~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~ 213 (225)
T 1op3_H 161 TVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 213 (225)
T ss_dssp EEECCTTSCCTTCEECCCE-ECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGG
T ss_pred EEEEecCCCcCCeEecCce-eCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCC
Confidence 9999999976322111111 12333 58898888888 999999999765
No 406
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.65 E-value=2.7e-16 Score=130.53 Aligned_cols=81 Identities=22% Similarity=0.368 Sum_probs=70.6
Q ss_pred CCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCc--ee----eecceEEEECCCCCCCCEEEEEEEEcCCCceEEE
Q psy14896 680 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA--YF----ENFNRILTIPNVKVEDQGEYICRASNDRSALESS 753 (813)
Q Consensus 680 ~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~--~~----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 753 (813)
....+.+|++++|.|.+.|.|.|.|+|+|||.+|..+. ++ .....+|.|.+++.+|+|.|+|.|.|.+|.++++
T Consensus 13 ~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~ 92 (100)
T 3knb_A 13 SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSAT 92 (100)
T ss_dssp SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEEEE
Confidence 34678899999999999999999999999999997654 22 1234689999999999999999999999999999
Q ss_pred EEEEEEc
Q psy14896 754 VTISIQA 760 (813)
Q Consensus 754 ~~l~V~~ 760 (813)
+.|.|+.
T Consensus 93 ~~l~V~~ 99 (100)
T 3knb_A 93 VNIHIRS 99 (100)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 9999974
No 407
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.65 E-value=1.3e-15 Score=148.21 Aligned_cols=173 Identities=15% Similarity=0.186 Sum_probs=111.8
Q ss_pred CCceeecCCCccccccEEEEeeeccCC--CCeEEEeecc--cccccccc-------cccccCCCccEEee------CCeE
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------GGNL 258 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g--~~l~~~~~-------~~~~~~~~~~~~~~------~~~l 258 (813)
|..+.+.+| ++|+|.|.+.+.| .+.|.|||.. ..+..... .........|+.+. +.+|
T Consensus 7 ~~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 81 (220)
T 2fbj_H 7 SGGGLVQPG-----GSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYL 81 (220)
T ss_dssp ECCEEECTT-----CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEE
T ss_pred CCCeEecCC-----CcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEE
Confidence 344666666 7799999998866 6799999974 22110000 00111223466543 1368
Q ss_pred EEcCCccccCCeeEEEEeecCcee--eEeeeeEEeeeee----cccccCCCCceeecCCCeEEEecCCCCCCc--ceEEE
Q psy14896 259 IINDPRQVEDRGSYHCKASNKFGS--IISESVQLAFGFI----GEFNLKRAPEIGNQNWGKAMFCDPPTNYPG--VNYYW 330 (813)
Q Consensus 259 ~i~~~~~~~d~G~Y~C~a~n~~g~--~~s~~~~l~v~~~----~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~--~~v~W 330 (813)
.|.+. +.+|+|.|.|.+.|..+. .....+.|.|... |.+.+.. +..+..|+.++|.|.+....|. +.++|
T Consensus 82 ~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W 159 (220)
T 2fbj_H 82 QMSKV-RSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTW 159 (220)
T ss_dssp EECSC-CGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEE
T ss_pred EECCC-ChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEE
Confidence 88885 899999999999987543 1234466777532 2222222 3345678889999997655576 89999
Q ss_pred eeccccccccCCccEEEccCc------cEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 331 ARDYFPNFVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 331 ~k~~~~~~~~~~~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
++++..+...... .....++ .|.|.....+|+|.|+|.|.|..+.
T Consensus 160 ~~~~~~~~~~~~~-~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~ 210 (220)
T 2fbj_H 160 GKSGKDITTVNFP-PALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNP 210 (220)
T ss_dssp SCCCSSCEEEECC-CEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSC
T ss_pred ecCCEecceEecC-ceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCc
Confidence 9999875221111 1122333 4888888888999999999998764
No 408
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.64 E-value=4.3e-16 Score=158.74 Aligned_cols=184 Identities=17% Similarity=0.180 Sum_probs=115.2
Q ss_pred CceeccCCCceEEeCCCCCCC--ccEEEEccCCC--CCc--c-------------cCCCeEEEee-----CccEEEEeec
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYP--GVNYYWARDYF--PNF--V-------------EEDKRVFVSY-----DGALYFSALE 632 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~~--~~~--~-------------~~~~~~~~~~-----~~~L~i~~~~ 632 (813)
...+.+|+.++|.|.+ .+.| .+.+.|+|+.. ... + ....|+.+.. +.+|+|.+++
T Consensus 31 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 109 (291)
T 2gki_A 31 PELVKPGASVKMSCKA-SGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLT 109 (291)
T ss_dssp CEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCC
T ss_pred cEEecCCCCEEEEEec-cCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCC
Confidence 4567889999999998 5666 57899999642 110 0 0123444432 2469999999
Q ss_pred ccCCeeEEEEEEeee-cCc-cccCceeeEEEccC-----------CCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC
Q psy14896 633 QIDAGNYSCNVQSKV-SDT-GRNGPFFPLKVFPH-----------SNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY 699 (813)
Q Consensus 633 ~~d~G~Y~C~a~n~~-g~~-~~~~~~~~l~v~~~-----------p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~ 699 (813)
.+|+|.|.|.+.|.. |.. ........|.|..+ +.... +.....+....+.+|++++|.|.+.+.
T Consensus 110 ~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~---~~v~~~p~~~~v~~G~~v~L~C~~~~~ 186 (291)
T 2gki_A 110 SEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSD---LVMSQSPSSLAVSAGEKVTMSCKSSQS 186 (291)
T ss_dssp GGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------C---CCEECSCSEEEEETTSCEEEEEEESSC
T ss_pred HHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCcc---ceEEcCCCEEEEcCCCcEEEEEEcCCc
Confidence 999999999999875 211 01112246777661 10000 000011223568899999999999998
Q ss_pred CCC------eEEEEeCC--cccC----C--------Cceee----ecceEEEECCCCCCCCEEEEEEEEcCCCceE-EEE
Q psy14896 700 PVP------SYNWTRRG--SPLP----R--------NAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSALE-SSV 754 (813)
Q Consensus 700 P~p------~i~W~k~g--~~l~----~--------~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~-~~~ 754 (813)
|.+ .+.|+|++ ..+. . ..++. ....+|+|.+++.+|+|.|.|.|.|.....- .-.
T Consensus 187 ~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt 266 (291)
T 2gki_A 187 LFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFGSGT 266 (291)
T ss_dssp CEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEECCCE
T ss_pred cccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCceEEcCCE
Confidence 876 99999963 3221 0 12221 1235799999999999999999999532111 134
Q ss_pred EEEEEcCCcc
Q psy14896 755 TISIQAEPNF 764 (813)
Q Consensus 755 ~l~V~~~P~~ 764 (813)
.|.|+..+.-
T Consensus 267 ~l~v~~~~~~ 276 (291)
T 2gki_A 267 KLEIKHHHHH 276 (291)
T ss_dssp EEEEECC---
T ss_pred EEEEEeeEcC
Confidence 6666665543
No 409
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.64 E-value=8.1e-16 Score=149.96 Aligned_cols=174 Identities=17% Similarity=0.239 Sum_probs=110.1
Q ss_pred CCceeecCCCccccccEEEEeeeccCC--CCeEEEeeccc--ccccccc---------cccccCCCccEEee----CC--
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKEDY--VQDRLVA---------NLIDPLSDKRFTLS----GG-- 256 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g~--~l~~~~~---------~~~~~~~~~~~~~~----~~-- 256 (813)
|....+.+| ++++|.|.+.+.| .+.|.|||++. ....... .........|+.+. .+
T Consensus 7 p~~~~~~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 81 (220)
T 1pz5_B 7 SGGGLVQPG-----GSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSV 81 (220)
T ss_dssp ECCEEECTT-----CCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEE
T ss_pred cCCEEEcCC-----CeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeE
Confidence 455666666 7799999998876 78999999752 1100000 00011113455543 22
Q ss_pred eEEEcCCccccCCeeEEEEeecCceee--EeeeeEEeeee----ecccccCCCCceeecCCCeEEEecCCCCCCcc-eEE
Q psy14896 257 NLIINDPRQVEDRGSYHCKASNKFGSI--ISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYY 329 (813)
Q Consensus 257 ~l~i~~~~~~~d~G~Y~C~a~n~~g~~--~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~ 329 (813)
+|.|.+. +.+|+|.|+|.|.|..+.. ....+.|.|.. +|.+........+.+|+.++|.|.+.+..|.| .++
T Consensus 82 ~L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~ 160 (220)
T 1pz5_B 82 YLQMNNL-RAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVK 160 (220)
T ss_dssp EEEECSC-CGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEE
T ss_pred EEEEccC-CHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEE
Confidence 7888885 8999999999999975432 12445666652 22223223233456788999999975445888 999
Q ss_pred EeeccccccccCCccEE----EccCccEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 330 WARDYFPNFVEEDKRVF----VSYDGALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 330 W~k~~~~~~~~~~~~~~----~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
|++++.+.......... ....+.|.|.++..+| |.|+|.|.|..|.
T Consensus 161 W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 210 (220)
T 1pz5_B 161 WNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASK 210 (220)
T ss_dssp EGGGTCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGT
T ss_pred EecCCcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCcc
Confidence 99998752111111111 1123468898888866 9999999999874
No 410
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.64 E-value=2.3e-16 Score=159.10 Aligned_cols=165 Identities=16% Similarity=0.241 Sum_probs=110.5
Q ss_pred CCCceeccCCCceEEeCCCCCCCccEEEEccC--CCCCcc-----------c---CCCeEEEee----CccEEEEeeccc
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARD--YFPNFV-----------E---EDKRVFVSY----DGALYFSALEQI 634 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~--~~~~~~-----------~---~~~~~~~~~----~~~L~i~~~~~~ 634 (813)
+....+.+|++++|.|.+. .+.+.|.|+|. +..... . ...|+.+.. +++|+|.+++.+
T Consensus 33 p~~v~v~~G~~v~L~C~~~--~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~ 110 (268)
T 3pl6_D 33 PSNKVTEKGKYVELRCDPI--SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERG 110 (268)
T ss_dssp CSEEEEETTCCEEEEEBCB--TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGG
T ss_pred CCEEEecCCCCEEEEEEeC--CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcc
Confidence 3445678999999999983 57789999993 221100 0 014566554 446999999999
Q ss_pred CCeeEEEEEEeeecCccccCceeeEEEcc------CCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCC--eEEE
Q psy14896 635 DAGNYSCNVQSKVSDTGRNGPFFPLKVFP------HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP--SYNW 706 (813)
Q Consensus 635 d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~------~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p--~i~W 706 (813)
|+|.|.|.+.|..+. ........|.|.. +|.+... ......+.+|+.++|.|.+.|.|++ .|+|
T Consensus 111 D~G~Y~C~~~~~~~~-~~~~~~~~l~V~~~~~~~~~P~v~~~-------~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W 182 (268)
T 3pl6_D 111 DSAVYLCATSALGDT-QYFGPGTRLTVLEDLKNVFPPEVAVF-------EPSEAEISHTQKATLVCLATGFYPDHVELSW 182 (268)
T ss_dssp GCEEEEEEEESSSSS-CEECCCEEEEEESCGGGCBCCEEEEE-------CCCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred cCEEEEEEEecCCCc-eeeCCcEEEEEecCcccccCCceEEe-------CCCcccccCCCceEEEEEECcccCCCeEEEE
Confidence 999999999974211 1112224566665 2221110 1111335569999999999986654 8999
Q ss_pred EeCCcccCCCceee---------------ecceEEEECCCCCCC-CEEEEEEEEcCCCc
Q psy14896 707 TRRGSPLPRNAYFE---------------NFNRILTIPNVKVED-QGEYICRASNDRSA 749 (813)
Q Consensus 707 ~k~g~~l~~~~~~~---------------~~~~~L~i~~v~~~d-~G~Y~C~a~N~~G~ 749 (813)
+|||.++..+.... ...+.|.|.....+| +|.|+|.|.|....
T Consensus 183 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 183 WVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp EESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 99999886543221 112467888888887 99999999997543
No 411
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.64 E-value=1.2e-16 Score=156.70 Aligned_cols=173 Identities=10% Similarity=0.105 Sum_probs=106.1
Q ss_pred eeeCCCceeecCCCccccccEEEEeeeccC-CC-C-eEEEeeccccc-ccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGY-PN-P-SYEWFKEDYVQ-DRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~-P~-p-~v~W~k~g~~l-~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
+...|....+.+| ++++|.|.+.|. |. | .|+|+|+|..+ ..... ......+..+. ...+|.|.+ ++.+
T Consensus 16 ~~~~p~~~~v~~G-----~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~-~~~~~~~g~~~-~~s~L~I~~-~~~~ 87 (231)
T 2w59_A 16 YAIPPSPGELYIS-----LDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPM-VLQEHFNGTYS-ASSAVPVST-QDWL 87 (231)
T ss_dssp EEECCCHHHHHTS-----CCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCC-EEEECTTSCEE-EEEEEECCH-HHHH
T ss_pred EEeCcChhhcccC-----CceEEEEEEeCccCCCCeEEEEEcCCeeccccccc-cceECCCCcEE-EEEEEEecc-hhcc
Confidence 4456776666666 779999999884 74 5 99999999866 21110 00011222222 123466666 4789
Q ss_pred CCeeEEEEeecCceeeEeeeeEEeee------eecccccCCCCceeecCCCeEEEecCCCCCCc-ceEEEeecccccccc
Q psy14896 268 DRGSYHCKASNKFGSIISESVQLAFG------FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVE 340 (813)
Q Consensus 268 d~G~Y~C~a~n~~g~~~s~~~~l~v~------~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~v~W~k~~~~~~~~ 340 (813)
|+|.|+|.|.|..+.. .+.+.|. .+|.+.+.........+..++|.|.+.+..|. ++|+|+|||+++...
T Consensus 88 D~g~Y~C~~~~~~~~~---~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 164 (231)
T 2w59_A 88 SGERFTCTVQHEELPL---PLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPAT 164 (231)
T ss_dssp TTCCEEEEEECTTCSS---CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGG
T ss_pred CCCEEEEEEEcCCCCC---ceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEECCEECCCc
Confidence 9999999999987642 2333332 23333332222122234568999997554564 899999999885433
Q ss_pred C--CccEEEc--------cC-c------cEEEeeeeecCCeeeEEEEeeecc
Q psy14896 341 E--DKRVFVS--------YD-G------ALYFSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 341 ~--~~~~~~~--------~~-~------~L~i~~v~~~D~G~Y~C~a~n~~g 375 (813)
. ....... .+ + .|.|.....+|.|.|+|.|.|...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l 216 (231)
T 2w59_A 165 EFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEAL 216 (231)
T ss_dssp GCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred ccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCC
Confidence 2 1111121 33 3 467777778889999999998764
No 412
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.64 E-value=1.8e-15 Score=152.45 Aligned_cols=178 Identities=20% Similarity=0.250 Sum_probs=114.4
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCC-----CCeEEEeecc--cccccccc--cccccCCCccEEee----C
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYP-----NPSYEWFKED--YVQDRLVA--NLIDPLSDKRFTLS----G 255 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P-----~p~v~W~k~g--~~l~~~~~--~~~~~~~~~~~~~~----~ 255 (813)
.+.++..|..+.+.+| ++++|.|.+.+.| .+.|.|||+. ..+..... .........|+... +
T Consensus 15 ~~~v~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~ 89 (268)
T 1x9q_A 15 DVVMTQTPLSLPVSLG-----DQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTD 89 (268)
T ss_dssp CCCEEEECSEECCCTT-----CCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTE
T ss_pred cceEEeeCCeEEecCC-----CCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCE
Confidence 4567777888877776 7799999999877 5899999974 21110000 00011123455543 2
Q ss_pred CeEEEcCCccccCCeeEEEEeecCceeeEeeeeEEeeeeecc----------------------ccc-CCCCceeecCCC
Q psy14896 256 GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE----------------------FNL-KRAPEIGNQNWG 312 (813)
Q Consensus 256 ~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~----------------------~~~-~~~~~~~~~~~~ 312 (813)
.+|.|.+. +.+|+|.|+|.|.|..+...+..+.|.|...+. +.+ .+....+.+|+.
T Consensus 90 ~~L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~ 168 (268)
T 1x9q_A 90 FTLKINRV-EAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGA 168 (268)
T ss_dssp EEEEESSC-CGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCC
T ss_pred EEEEECCC-ChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCc
Confidence 36888885 899999999999997654334456666654321 011 134567788999
Q ss_pred eEEEecCCCCCC--cceEEEeecc--cccc-c----------------cCCccEEEccC-----ccEEEeeeeecCCeee
Q psy14896 313 KAMFCDPPTNYP--GVNYYWARDY--FPNF-V----------------EEDKRVFVSYD-----GALYFSALEQIDAGNY 366 (813)
Q Consensus 313 ~~l~C~~~~~~p--~~~v~W~k~~--~~~~-~----------------~~~~~~~~~~~-----~~L~i~~v~~~D~G~Y 366 (813)
++|.|.+. +.| .+.+.|+|++ ..+. + ....|+.+..+ .+|.|.+++.+|+|.|
T Consensus 169 v~L~C~~~-~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y 247 (268)
T 1x9q_A 169 MKLSCVTS-GFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIY 247 (268)
T ss_dssp EEEEEEEE-SSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEE
T ss_pred EEEEEEec-CccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEE
Confidence 99999964 444 3899999863 2210 0 12345555432 4799999999999999
Q ss_pred EEEEeee
Q psy14896 367 SCNVQSK 373 (813)
Q Consensus 367 ~C~a~n~ 373 (813)
+|.|.|.
T Consensus 248 ~C~a~~~ 254 (268)
T 1x9q_A 248 YCTGASY 254 (268)
T ss_dssp EEEEEET
T ss_pred EEEEccC
Confidence 9999874
No 413
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.64 E-value=3.8e-16 Score=155.86 Aligned_cols=165 Identities=17% Similarity=0.270 Sum_probs=110.2
Q ss_pred CceeccCCCceEEeCCCCCCC--ccEEEEccCC--CCCc-c--------------cCCCeEEEeeC-----ccEEEEeec
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYP--GVNYYWARDY--FPNF-V--------------EEDKRVFVSYD-----GALYFSALE 632 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~--~~~~-~--------------~~~~~~~~~~~-----~~L~i~~~~ 632 (813)
+..+.+|+.++|.|.+ .+.| .+.|.|||+. .... + ....|+.+..+ .+|+|.+++
T Consensus 15 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 93 (261)
T 2xqy_G 15 AELVKPGASVKMSCKA-SGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLT 93 (261)
T ss_dssp EEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CEEEcCCCCEEEEEEe-CCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCC
Confidence 4567889999999998 5655 6889999974 2210 0 01346666542 369999999
Q ss_pred ccCCeeEEEEEEeeecCccccCceeeEEEccC----CCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CCC-eEEE
Q psy14896 633 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPH----SNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVP-SYNW 706 (813)
Q Consensus 633 ~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~----p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~p-~i~W 706 (813)
.+|+|.|.|.+.|..+..........|.|... |.+.. .++ ...+.+|+.++|.|.+.|. |.| .|+|
T Consensus 94 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~--~~p------~~~v~~g~~v~L~C~~~g~~P~~i~v~W 165 (261)
T 2xqy_G 94 SEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYP--LAP------VCGDTTGSSVTLGCLVKGYFPEPVTLTW 165 (261)
T ss_dssp GGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEE--ECC------CCC--CCSEEEEEEEEEEEBSSCCEEEE
T ss_pred cccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEE--eCC------CccccCCCcEEEEEEEEeEeCCCCEEEE
Confidence 99999999999985321111112246777752 22211 111 1235789999999999985 776 9999
Q ss_pred EeCCcccCCCc---eee----ecceEEEECCCCCCCCEEEEEEEEcCCCceE
Q psy14896 707 TRRGSPLPRNA---YFE----NFNRILTIPNVKVEDQGEYICRASNDRSALE 751 (813)
Q Consensus 707 ~k~g~~l~~~~---~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 751 (813)
+|++..+.... ... ...+.|+|..+..+| |.|+|.|.|......
T Consensus 166 ~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~ 216 (261)
T 2xqy_G 166 NSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTK 216 (261)
T ss_dssp GGGTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEE
T ss_pred ecCCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCcc
Confidence 99998763211 111 123579999998888 999999999765543
No 414
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.64 E-value=2.1e-15 Score=147.01 Aligned_cols=164 Identities=17% Similarity=0.299 Sum_probs=109.9
Q ss_pred CceeccCCCceEEeCCCCCC--CccEEEEccCCCCCcc-------------------cCCCeEEEeeCc-----cEEEEe
Q psy14896 577 PEIGNQNWGKAMFCDPPTNY--PGVNYYWARDYFPNFV-------------------EEDKRVFVSYDG-----ALYFSA 630 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~--p~~~v~W~k~~~~~~~-------------------~~~~~~~~~~~~-----~L~i~~ 630 (813)
+..+.+|+.++|.|.+ .+. +.+.+.|||....... ....|+.+..++ +|+|.+
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 87 (221)
T 3m8o_H 9 GGLVQPGGSLKLSCAA-SGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNS 87 (221)
T ss_dssp CEEECTTCCEEEEEEE-ESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECS
T ss_pred CEEEcCCCCEEEEEEc-ccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECC
Confidence 4567889999999998 443 3678999984321000 113566665443 499999
Q ss_pred ecccCCeeEEEEEEeeecCccccCceeeEEEccCC-Cccccc-cCCCCCCCCCcCCCCCCeEEEEEEecC-CCC--CeEE
Q psy14896 631 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLK-FPNNFPKTFPEAPKAGDKVRLECVAFG-YPV--PSYN 705 (813)
Q Consensus 631 ~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p-~~~~~~-~p~~~~~~~~~~~~~G~~v~l~C~~~g-~P~--p~i~ 705 (813)
++.+|+|.|.|.+.|.... ........|.|...+ ....+. .+ +. .. .+|+.++|.|.+.| .|. +.|+
T Consensus 88 v~~~DsG~Y~C~~~~~~~~-~~~~~~~~l~V~~~~~~~p~v~~~~----~~--~~-~~g~~v~L~C~~~~~~P~~~~~v~ 159 (221)
T 3m8o_H 88 LKSDDTAMYYCVIRGDVYN-RQWGQGTLVTVSSASPTSPKVFPLS----LC--ST-QPDGNVVIACLVQGFFPQEPLSVT 159 (221)
T ss_dssp CCGGGCEEEEEEEESCTTC-CCBBCCEEEEECSCCCBCCEEEEEE----CC--SC-CCTTEEEEEEEEEEEBSSCSEEEE
T ss_pred CCHHHCEEEEEEEECCChh-heECCCEEEEEecCCCCCCeEEEec----Cc--cc-ccCCCEEEEEEEEeeECCCCEEEE
Confidence 9999999999999986310 111122457776321 111111 11 00 12 68999999999998 776 4999
Q ss_pred EEeCCcccCC----------CceeeecceEEEECCCCCCCCEEEEEEEEcCCCce
Q psy14896 706 WTRRGSPLPR----------NAYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 750 (813)
Q Consensus 706 W~k~g~~l~~----------~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 750 (813)
|+|+|..+.. +..+. ..+.|+|..+..+|+|.|+|.|.|..|..
T Consensus 160 W~~~g~~~~~~~~~~~~~~~~~~~~-~~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 160 WSESGQGVTARNFPPSQDASGDLYT-TSSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp ESCCSTTCEEEECCCEECSSSSCEE-EEEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred EEECCEECceEEcCceeeCCCCcEE-EEEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 9999988731 21221 13469999999999999999999987654
No 415
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.64 E-value=6.3e-16 Score=129.96 Aligned_cols=92 Identities=23% Similarity=0.386 Sum_probs=74.0
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEee--C--CeEEEcCC
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--G--GNLIINDP 263 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~--~--~~l~i~~~ 263 (813)
.||.|+..|.++.+.+| +++.|.|.+.|.|.|.|+|||||.+|. .+.++.+. + .+|.|.+.
T Consensus 12 ~pP~f~~~p~~~~v~~G-----~~~~l~C~~~G~P~p~v~W~k~g~~l~----------~~~~~~~~~~~~~~~L~I~~v 76 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSG-----AEAELKCVVLGEPPPVVVWEKGGQQLA----------ASERLSFPADGAEHGLLLTAA 76 (107)
T ss_dssp EEEEEEECCCCEEEETT-----SCEEEEEEEEEESCCEEEEEETTEECC----------CCSSEECCEETTEEEEEESSC
T ss_pred CCCEEEeCCCcEEEeCC-----CcEEEEEEEEEecCCEEEEEECccccc----------ceeeEEEeecCceEEEEEecC
Confidence 47999999999998887 679999999999999999999998773 23334332 2 25777775
Q ss_pred ccccCCeeEEEEeecCceeeEeeeeEEeeeeec
Q psy14896 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIG 296 (813)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~ 296 (813)
+.+|+|.|+|.|.|..|.+ +.++.|.|..+|
T Consensus 77 -~~~D~G~Y~C~a~N~~G~~-~~~~~l~V~~pP 107 (107)
T 3knb_B 77 -LPTDAGVYVCRARNAAGEA-YAAAAVTVLEPP 107 (107)
T ss_dssp -CGGGCEEEEEEEEETTEEE-EEEEEEEEEC--
T ss_pred -ChhhCEEEEEEEEECCCEE-EEEEEEEEEcCC
Confidence 8999999999999999987 667888887654
No 416
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.64 E-value=8.9e-17 Score=154.87 Aligned_cols=167 Identities=13% Similarity=0.186 Sum_probs=106.3
Q ss_pred ccccCeEEEEEeeccC----CCcEEEeeccccccceeccccCCCCCceEEeeCCeEEEeCCCCCCCCceEEEEEEcCcee
Q psy14896 480 SILNDITLSCYAGGYP----NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGS 555 (813)
Q Consensus 480 ~~g~~~~l~C~~~g~p----~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~ 555 (813)
.+|+.++|.|.+.|.| .+.|.|+|++..+..............++ ...+.|.|.++ +.+|+|.|+|.|.|..+.
T Consensus 16 ~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~-~~~~~L~I~~~-~~~D~G~Y~C~a~~~~~~ 93 (207)
T 2vol_A 16 TITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTF-RSVSELPIMHQ-DWLNGKEFKCRVNSAAFP 93 (207)
T ss_dssp STTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEE-EEEEEEECCHH-HHHTTCCEEEEEECTTCS
T ss_pred ccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcE-EEEEEEEEehh-HcCCCCEEEEEEEccCCC
Confidence 6899999999999985 24899999996542211000000011222 12357889886 899999999999998775
Q ss_pred E-EeecEEE--EEeecccccccCCCceeccCCCceEEeCCCCCCCc-cEEEEccCCCCCcccCCCeEEEeeCcc------
Q psy14896 556 I-ISESVQL--AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSYDGA------ 625 (813)
Q Consensus 556 ~-~s~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~v~W~k~~~~~~~~~~~~~~~~~~~~------ 625 (813)
. ....+.+ .+..+|.+.+.........|+.++|.|.+...+|+ +.|+|+|||.++......+.....+|+
T Consensus 94 ~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~ 173 (207)
T 2vol_A 94 APIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSK 173 (207)
T ss_dssp SCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEE
T ss_pred CceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEE
Confidence 3 1122222 34556665544444333458889999999433565 499999999864221111223345665
Q ss_pred EEEEeecccCCeeEEEEEEeeec
Q psy14896 626 LYFSALEQIDAGNYSCNVQSKVS 648 (813)
Q Consensus 626 L~i~~~~~~d~G~Y~C~a~n~~g 648 (813)
|.|.....+|.|.|+|.|.|...
T Consensus 174 l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 174 LNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp EEEEHHHHSSCCEEEEEEECTTS
T ss_pred EEECHHHcCCCCEEEEEEECCCC
Confidence 44444455689999999999764
No 417
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.64 E-value=6.9e-16 Score=129.15 Aligned_cols=81 Identities=20% Similarity=0.372 Sum_probs=70.4
Q ss_pred CCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceee---------ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEE
Q psy14896 684 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE---------NFNRILTIPNVKVEDQGEYICRASNDRSALESSV 754 (813)
Q Consensus 684 ~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~---------~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~ 754 (813)
...|+.+.|.|.+.|.|.|.|+|+|||..|..+.+.. ...++|.|.+++.+|+|.|+|.|.|.+|.++.++
T Consensus 13 ~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~ 92 (103)
T 1wwb_X 13 PTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQI 92 (103)
T ss_dssp CCCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred ceECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEE
Confidence 3568899999999999999999999999998765321 1234599999999999999999999999999999
Q ss_pred EEEEEcCCcc
Q psy14896 755 TISIQAEPNF 764 (813)
Q Consensus 755 ~l~V~~~P~~ 764 (813)
.|.|..+|.+
T Consensus 93 ~l~V~~~P~~ 102 (103)
T 1wwb_X 93 SAHFMGWPGI 102 (103)
T ss_dssp EECCSCCCCC
T ss_pred EEEECCCCCC
Confidence 9999988864
No 418
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.63 E-value=2.7e-16 Score=156.28 Aligned_cols=168 Identities=17% Similarity=0.178 Sum_probs=110.7
Q ss_pred CCceeccCCCceEEeCCCCCCCccEEEEccCC--CCC------------cccCCCeEEEee----CccEEEEeecccCCe
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDY--FPN------------FVEEDKRVFVSY----DGALYFSALEQIDAG 637 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~--~~~------------~~~~~~~~~~~~----~~~L~i~~~~~~d~G 637 (813)
....+.+|+.++|.|.+ .+.|.+.|.|+|.. ... ......|+.+.. +.+|+|.+++.+|+|
T Consensus 9 ~~v~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G 87 (245)
T 3nfj_J 9 ATLVQPVGSPLSLECTV-EGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSG 87 (245)
T ss_dssp SEEEEETTCCEEEEEEE-ESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCE
T ss_pred ceEEecCCCCEEEEEEe-cCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCE
Confidence 34567889999999999 67889999999932 110 011123444443 236999999999999
Q ss_pred eEEEEEEeeecC---ccccCceeeEEEcc------CCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CCC-eEEE
Q psy14896 638 NYSCNVQSKVSD---TGRNGPFFPLKVFP------HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVP-SYNW 706 (813)
Q Consensus 638 ~Y~C~a~n~~g~---~~~~~~~~~l~v~~------~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~p-~i~W 706 (813)
.|.|.|.|..|. .........|.|.. +|.+... ......+.+|+.++|.|.+.|. |++ .|+|
T Consensus 88 ~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~-------~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W 160 (245)
T 3nfj_J 88 FYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVF-------EPSEAEISHTQKATLVCLATGFFPDHVELSW 160 (245)
T ss_dssp EEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEE-------ECCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred EEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEee-------cCCcccccCCCceEEEEEEccCcCCCEEEEE
Confidence 999999994330 11111224567765 2222110 0111234559999999999985 444 7999
Q ss_pred EeCCcccCCCceee---------------ecceEEEECCCCCCC-CEEEEEEEEcCCCceE
Q psy14896 707 TRRGSPLPRNAYFE---------------NFNRILTIPNVKVED-QGEYICRASNDRSALE 751 (813)
Q Consensus 707 ~k~g~~l~~~~~~~---------------~~~~~L~i~~v~~~d-~G~Y~C~a~N~~G~~~ 751 (813)
+|||.+|....... ...+.|.|.....+| .|.|+|.|.|......
T Consensus 161 ~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~ 221 (245)
T 3nfj_J 161 WVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp EETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCSS
T ss_pred EECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCCc
Confidence 99999987643221 112478888888888 6799999999865443
No 419
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.63 E-value=2.7e-15 Score=151.84 Aligned_cols=193 Identities=15% Similarity=0.159 Sum_probs=116.9
Q ss_pred eeeCCCceeecCCCccccccEEEEeeeccC--CCCeEEEeeccc--cccccccc-------ccccCCCccEEee-C----
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGY--PNPSYEWFKEDY--VQDRLVAN-------LIDPLSDKRFTLS-G---- 255 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~--P~p~v~W~k~g~--~l~~~~~~-------~~~~~~~~~~~~~-~---- 255 (813)
++. |..+.+.+| ++|+|.|.+.+. |.+.+.|||... .+...... ........|+.+. +
T Consensus 4 v~q-p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 77 (280)
T 3fku_X 4 LVQ-SGAEVKKPG-----SSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTR 77 (280)
T ss_dssp EEC-CCCCEECTT-----CCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTT
T ss_pred EEc-CCCEEECCC-----CcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCC
Confidence 344 667777776 779999999875 668999998531 11100000 0011112344443 1
Q ss_pred -CeEEEcCCccccCCeeEEEEeecC--------ceeeEeeeeEEeeee-------------ecccccC-CCCceeecCCC
Q psy14896 256 -GNLIINDPRQVEDRGSYHCKASNK--------FGSIISESVQLAFGF-------------IGEFNLK-RAPEIGNQNWG 312 (813)
Q Consensus 256 -~~l~i~~~~~~~d~G~Y~C~a~n~--------~g~~~s~~~~l~v~~-------------~~~~~~~-~~~~~~~~~~~ 312 (813)
.+|.|.+. +.+|+|.|.|.|.|. ........+.|.|.. .+++.+. .....+.+|+.
T Consensus 78 ~~sL~I~~v-~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~v~~G~~ 156 (280)
T 3fku_X 78 TAYMDLRSL-RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPSVSKGLRQT 156 (280)
T ss_dssp EEEEEECSC-CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSEEEECTTCC
T ss_pred EEEEEECCC-ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCcEEEecCCC
Confidence 26888885 899999999999987 122224456666655 1122222 22267789999
Q ss_pred eEEEecCCCCCC-cceEEEeec--cccccc----------cCCccEEEccCc---cEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 313 KAMFCDPPTNYP-GVNYYWARD--YFPNFV----------EEDKRVFVSYDG---ALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 313 ~~l~C~~~~~~p-~~~v~W~k~--~~~~~~----------~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
++|.|.+....+ .+.+.|+|. +..... ....|+.+..++ +|.|.+++.+|+|.|+|.+.|..+.
T Consensus 157 v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~ 236 (280)
T 3fku_X 157 ATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLS 236 (280)
T ss_dssp EEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETTTT
T ss_pred EEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCCCC
Confidence 999999755344 489999984 222110 112445444333 5999999999999999999986522
Q ss_pred cCCCCCceeeEEccC
Q psy14896 377 TGRNGPFFPLKVFPH 391 (813)
Q Consensus 377 ~~~~s~~~~l~v~~~ 391 (813)
....+....|.|...
T Consensus 237 ~~~~g~~t~l~V~~~ 251 (280)
T 3fku_X 237 AVVFGGGTKLTVLGQ 251 (280)
T ss_dssp EEEEBCCCEEEEC--
T ss_pred ceEECCCEEEEECCC
Confidence 111223356776543
No 420
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.63 E-value=1.8e-16 Score=155.47 Aligned_cols=159 Identities=16% Similarity=0.266 Sum_probs=105.9
Q ss_pred ceeccCCCceEEeCCCCCCCc--cEEEEccCCCCCcccCCCeEEEeeCc------cEEEEeecccCCeeEEEEEEeeecC
Q psy14896 578 EIGNQNWGKAMFCDPPTNYPG--VNYYWARDYFPNFVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSD 649 (813)
Q Consensus 578 ~~~~~g~~~~l~C~~~~~~p~--~~v~W~k~~~~~~~~~~~~~~~~~~~------~L~i~~~~~~d~G~Y~C~a~n~~g~ 649 (813)
..+..|+.++|.|.+....|. ..|+|+|+|..+............+| +|.|.++..+|+|.|+|.|.|..+.
T Consensus 23 ~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~ 102 (231)
T 2w59_A 23 GELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEELP 102 (231)
T ss_dssp HHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTCS
T ss_pred hhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCCCC
Confidence 345689999999999433564 49999999987511111122222333 4999999999999999999997753
Q ss_pred ccccCceeeEEEcc------CCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-C-CCeEEEEeCCcccCCCce---
Q psy14896 650 TGRNGPFFPLKVFP------HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-P-VPSYNWTRRGSPLPRNAY--- 718 (813)
Q Consensus 650 ~~~~~~~~~l~v~~------~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P-~p~i~W~k~g~~l~~~~~--- 718 (813)
. .+.+.|.. +|.+... + +. ...+ .|..++|.|.+.|+ | .+.|+|+|||.+|..+..
T Consensus 103 ~-----~~~~~v~~~~~~~~~P~v~v~--~----~~-~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~ 169 (231)
T 2w59_A 103 L-----PLSKSVYRNTGPTTPPLIYPF--A----PH-PEEL-SLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTT 169 (231)
T ss_dssp S-----CEEEEECCCCSCCBCCEEEEE--C----CC-GGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEEC
T ss_pred C-----ceEEEEecCCCCCcCCEEEEe--C----CC-HHHh-ccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccC
Confidence 1 23455543 2222111 1 00 1112 35679999999986 4 369999999998865531
Q ss_pred ---ee--------ec------ceEEEECCCCCCCCEEEEEEEEcCCCc
Q psy14896 719 ---FE--------NF------NRILTIPNVKVEDQGEYICRASNDRSA 749 (813)
Q Consensus 719 ---~~--------~~------~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 749 (813)
.. .+ .+.|.|.....+|.|.|+|+|.|....
T Consensus 170 ~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 170 AVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp CCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred ccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 11 11 246888888888999999999998654
No 421
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.63 E-value=1.8e-16 Score=155.24 Aligned_cols=180 Identities=13% Similarity=0.180 Sum_probs=106.7
Q ss_pred CCceeeCCCcee-ecCCCccccccEEEEeeeccC---C-CCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCC
Q psy14896 189 GPYFIKQPTDVV-FDLSKRSILNDITLSCYAGGY---P-NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDP 263 (813)
Q Consensus 189 ~P~~~~~p~~~~-v~~g~~~~g~~v~l~C~~~g~---P-~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 263 (813)
|+.++..|.... +..| ++++|.|.+.|. | .+.|+|+|||.++............+..+... ..|.|..
T Consensus 23 P~v~i~~ps~~~~l~~g-----~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~-s~L~i~~- 95 (240)
T 4acp_A 23 PSVFLFPPKPKDTLMIS-----RTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVV-SVLTVLH- 95 (240)
T ss_dssp CEEEEECCCHHHHHSSS-----SCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEE-EEEECCH-
T ss_pred CEEEEECcChHHhcccC-----CCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEE-EEEEEec-
Confidence 345555555554 4345 779999999985 3 34899999998874322111111223333322 3455544
Q ss_pred ccccCCeeEEEEeecCcee-eEeeeeEE--eeeeecccccCCCCceeecCCCeEEEecCCCCCCc-ceEEEeeccccccc
Q psy14896 264 RQVEDRGSYHCKASNKFGS-IISESVQL--AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFV 339 (813)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~-~~s~~~~l--~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~v~W~k~~~~~~~ 339 (813)
...+|.|.|+|+|.|..+. .....+.+ .+..+|.+.+.........+..++|.|.+...+|. ..++|+|||+++..
T Consensus 96 ~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~ 175 (240)
T 4acp_A 96 QDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENN 175 (240)
T ss_dssp HHHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSS
T ss_pred hhccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCC
Confidence 3567899999999998763 22334432 23344555554444333447788999997555676 48999999987532
Q ss_pred cCCccEEEccCccE------EEeeeeecCCeeeEEEEeeecc
Q psy14896 340 EEDKRVFVSYDGAL------YFSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 340 ~~~~~~~~~~~~~L------~i~~v~~~D~G~Y~C~a~n~~g 375 (813)
..........+|++ .|.....+|.|.|+|.|.+...
T Consensus 176 ~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 176 YKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp EEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred cCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECCC
Confidence 22223333455543 4444444578999999998653
No 422
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.63 E-value=3.3e-16 Score=158.06 Aligned_cols=158 Identities=20% Similarity=0.312 Sum_probs=92.0
Q ss_pred ecccCCeeEEEEEEeeecCccccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeC-
Q psy14896 631 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR- 709 (813)
Q Consensus 631 ~~~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~- 709 (813)
..+.|.+.|.|.|.|..|..... ..+.|..+|. ...+.+|++++|.|.+.+ |.+.|.|||.
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~---~~~~v~~~p~--------------~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~ 64 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGG---GGMKVIQTPR--------------YLVKGQGQKAKMRCIPEK-GHPVVFWYQQN 64 (270)
T ss_dssp ----------------------------CCCEEECS--------------EEEEETTSCEEEEEECCT-TCCEEEEEEEC
T ss_pred chhhhHHHHHHHHhccCCccccc---cceeEEeCCC--------------eEEEcCCCCEEEEEEecC-CCceEEEEEEC
Confidence 45789999999999988764433 1222222221 246789999999999976 7789999993
Q ss_pred -CcccC------C------Cc----eee-----ecceEEEECCCCCCCCEEEEEEEEcCC----CceEEEEEEEEEc---
Q psy14896 710 -GSPLP------R------NA----YFE-----NFNRILTIPNVKVEDQGEYICRASNDR----SALESSVTISIQA--- 760 (813)
Q Consensus 710 -g~~l~------~------~~----~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~N~~----G~~~~~~~l~V~~--- 760 (813)
+..+. . .. ++. ..+.+|+|.+++.+|+|.|.|.|.|.. +.....+.|.|..
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~ 144 (270)
T 3qib_D 65 KNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLK 144 (270)
T ss_dssp TTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCST
T ss_pred CCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccc
Confidence 22110 0 00 111 124689999999999999999999743 2233456788876
Q ss_pred ---CCccc-ccCCceeecCCCeEEEEEEEcc-cCCc-eEEEEECCEeccccc
Q psy14896 761 ---EPNFT-IPLTDKHMDNQADLTWTCEAFG-VPDV-TYSWFRNGELGHQMT 806 (813)
Q Consensus 761 ---~P~~~-~~~~~~~~~~g~~~~l~C~~~g-~p~~-~v~W~k~g~~l~~~~ 806 (813)
+|.+. ..+....+..|+.++|.|.+.| .|++ .|.|+|||++|..+.
T Consensus 145 ~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~ 196 (270)
T 3qib_D 145 NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGV 196 (270)
T ss_dssp TCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTE
T ss_pred cccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCc
Confidence 56544 3344445667999999999998 6666 899999999997643
No 423
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.63 E-value=1.1e-15 Score=151.81 Aligned_cols=178 Identities=13% Similarity=0.159 Sum_probs=111.1
Q ss_pred ceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeeccc--cccccc------cc-ccccCCCccEEee-----CC
Q psy14896 191 YFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY--VQDRLV------AN-LIDPLSDKRFTLS-----GG 256 (813)
Q Consensus 191 ~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~--~l~~~~------~~-~~~~~~~~~~~~~-----~~ 256 (813)
.++..|..+.+.+| ++++|.|.+.+.|.+.|.|||... ...... .. ........|+.+. +.
T Consensus 3 ~v~~~p~~~~v~~G-----~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 77 (246)
T 4dzb_B 3 VVSQHPSWVISKSG-----TSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLS 77 (246)
T ss_dssp CEEEECSEEEEETT-----SCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEE
T ss_pred ccEECCcEEEEeCC-----CcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEE
Confidence 45666777888777 779999999999999999999321 100000 00 0001112455443 23
Q ss_pred eEEEcCCccccCCeeEEEEeecCce---eeEeeeeEEeeee------ecccccC-CCCceeecCCCeEEEecCCCCCCcc
Q psy14896 257 NLIINDPRQVEDRGSYHCKASNKFG---SIISESVQLAFGF------IGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGV 326 (813)
Q Consensus 257 ~l~i~~~~~~~d~G~Y~C~a~n~~g---~~~s~~~~l~v~~------~~~~~~~-~~~~~~~~~~~~~l~C~~~~~~p~~ 326 (813)
+|.|.+. +.+|+|.|+|.|.|..+ ...+..+.|.|.. +|.+.+. +....+.+|+.++|.|.+....|++
T Consensus 78 ~L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~ 156 (246)
T 4dzb_B 78 TLTVTSA-HPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH 156 (246)
T ss_dssp EEEECSC-CGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSC
T ss_pred EEEECCC-CHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCc
Confidence 6888885 89999999999997643 1223445666653 2222222 2223455688999999964434433
Q ss_pred -eEEEeeccccccccCCccEEEc--------cCc------cEEEeeeeecC-CeeeEEEEeeeccc
Q psy14896 327 -NYYWARDYFPNFVEEDKRVFVS--------YDG------ALYFSALEQID-AGNYSCNVQSKVSD 376 (813)
Q Consensus 327 -~v~W~k~~~~~~~~~~~~~~~~--------~~~------~L~i~~v~~~D-~G~Y~C~a~n~~g~ 376 (813)
.++|+|||.++.. ..+.... .++ .|.|.....+| +|.|+|.|.|....
T Consensus 157 ~~v~W~k~g~~l~~--~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~ 220 (246)
T 4dzb_B 157 VELSWWVNGKEVHS--GVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 220 (246)
T ss_dssp EEEEEEETTEEECT--TEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred eEEEEEECCEECCC--CcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCC
Confidence 9999999987432 1111110 133 37788887888 99999999997654
No 424
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.63 E-value=4e-16 Score=151.49 Aligned_cols=176 Identities=12% Similarity=0.145 Sum_probs=106.5
Q ss_pred CCceeccCCCceEEeCCCC-CCCccEEEEccCCCCC--c-c-------------cCCCeEEEeeCc---cEEEEeecccC
Q psy14896 576 APEIGNQNWGKAMFCDPPT-NYPGVNYYWARDYFPN--F-V-------------EEDKRVFVSYDG---ALYFSALEQID 635 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~-~~p~~~v~W~k~~~~~--~-~-------------~~~~~~~~~~~~---~L~i~~~~~~d 635 (813)
.+..+.+|+.++|.|.+.. ..+.+.+.|||..... . + ....|+.+..++ +|+|.+++.+|
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 86 (215)
T 3nl4_H 7 GGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTED 86 (215)
T ss_dssp CCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGG
T ss_pred CCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCccc
Confidence 3556788999999999832 2346789999843110 0 0 123455554433 49999999999
Q ss_pred CeeEEEEEEeeecCc-cccCceeeEEEccCC-Cccccc-cCCCCCCCCCcCCCCCCeEEEEEEecCCCCC--eEEEEeCC
Q psy14896 636 AGNYSCNVQSKVSDT-GRNGPFFPLKVFPHS-NFQQLK-FPNNFPKTFPEAPKAGDKVRLECVAFGYPVP--SYNWTRRG 710 (813)
Q Consensus 636 ~G~Y~C~a~n~~g~~-~~~~~~~~l~v~~~p-~~~~~~-~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p--~i~W~k~g 710 (813)
+|.|.|.+.|..+.. ........|.|...+ ....+. .+. ...+.+|+.++|.|.+.|.|++ .+.|+|+|
T Consensus 87 ~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~------~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g 160 (215)
T 3nl4_H 87 TATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAP------CCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGT 160 (215)
T ss_dssp CEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECC------CTTCCC--CEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecC------CccccCCCcEEEEEEEeeeeCCCeEEEEeeCC
Confidence 999999999875420 001222467776211 111111 111 1346689999999999986543 68899999
Q ss_pred cccCCCc--eeeecceEEEE---CCCCCCCCEEEEEEEEcCCCceEEEEEEEE
Q psy14896 711 SPLPRNA--YFENFNRILTI---PNVKVEDQGEYICRASNDRSALESSVTISI 758 (813)
Q Consensus 711 ~~l~~~~--~~~~~~~~L~i---~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 758 (813)
..+.... .....++.+.+ ..+...| |.|+|.|.|..|.......|.+
T Consensus 161 ~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~~ 212 (215)
T 3nl4_H 161 LTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVAP 212 (215)
T ss_dssp BCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECCS
T ss_pred EECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecCC
Confidence 8653221 11122333333 4456667 9999999999988776666543
No 425
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.63 E-value=3.5e-16 Score=155.94 Aligned_cols=175 Identities=16% Similarity=0.245 Sum_probs=113.6
Q ss_pred CceeccCCCceEEeCCCCC--CCccEEEEccCCCCC---cc--------------cCCCeEEEeeCc-----cEEEEeec
Q psy14896 577 PEIGNQNWGKAMFCDPPTN--YPGVNYYWARDYFPN---FV--------------EEDKRVFVSYDG-----ALYFSALE 632 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~--~p~~~v~W~k~~~~~---~~--------------~~~~~~~~~~~~-----~L~i~~~~ 632 (813)
...+.+|+.++|.|.+ .+ .+...+.|||..... .+ ....|+.+..++ +|+|.+++
T Consensus 9 ~v~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (253)
T 3liz_H 9 GGLVQPGGSLKLSCAA-SGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLK 87 (253)
T ss_dssp CCEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCC
T ss_pred CEEECCCCcEEEEEEe-eCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCC
Confidence 4567889999999998 34 335789999853110 00 112455555433 39999999
Q ss_pred ccCCeeEEEEEEeeecC-ccccCceeeEEEcc-CCCccccccCCCCCCCCCcCCCCCCeEEEEEEecC-CCCC-eEEEEe
Q psy14896 633 QIDAGNYSCNVQSKVSD-TGRNGPFFPLKVFP-HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG-YPVP-SYNWTR 708 (813)
Q Consensus 633 ~~d~G~Y~C~a~n~~g~-~~~~~~~~~l~v~~-~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g-~P~p-~i~W~k 708 (813)
.+|+|.|.|.+.|.... .........|.|.. .+....+.. ......+..|+.++|.|.+.| .|.| .|+|+|
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~-----~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~ 162 (253)
T 3liz_H 88 SEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYP-----LAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS 162 (253)
T ss_dssp GGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEE-----ECC------CCEEEEEEEEEEEBSSCCEEEEGG
T ss_pred hhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEE-----ecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEe
Confidence 99999999999886211 01111224677762 111111110 011134567999999999998 7766 899999
Q ss_pred CCcccCC--------CceeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEE
Q psy14896 709 RGSPLPR--------NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 759 (813)
Q Consensus 709 ~g~~l~~--------~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 759 (813)
+|..+.. ...+. ..+.|+|.....+| |.|+|.|.|..+.......|.+.
T Consensus 163 ~~~~~~~~~~~~~~~~g~~~-~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 163 GSLSSGVHTFPAVLQSDLYT-LSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp GTBCTTEEECCCEEETTEEE-EEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred CCeecceEeCCccccCCeEE-EEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 9974321 11111 13679999999999 99999999999988888887766
No 426
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.63 E-value=6.1e-16 Score=153.68 Aligned_cols=166 Identities=14% Similarity=0.192 Sum_probs=109.5
Q ss_pred CCCceeccCCCceEEeCCCCCCCccEEEEccCC--CC-----------CcccC---CCeEEEeeC----ccEEEEeeccc
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDY--FP-----------NFVEE---DKRVFVSYD----GALYFSALEQI 634 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~--~~-----------~~~~~---~~~~~~~~~----~~L~i~~~~~~ 634 (813)
+....+.+|+.++|.| . .+.+.+.|.|+|.. .. ..... ..|+.+..+ .+|+|.+++.+
T Consensus 9 p~~v~v~~G~~v~L~C-~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~ 86 (245)
T 4ei6_B 9 PSHQIIDMGQMVTLNC-D-PVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALE 86 (245)
T ss_dssp CSEEEEETTCCEEEEE-E-CCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGG
T ss_pred CceEEecCCCCEEEEE-E-cCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHh
Confidence 3455678899999999 4 57788999999821 10 00011 156665543 26999999999
Q ss_pred CCeeEEEEEEeeecC-ccccCceeeEEEcc------CCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CCC-eEE
Q psy14896 635 DAGNYSCNVQSKVSD-TGRNGPFFPLKVFP------HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVP-SYN 705 (813)
Q Consensus 635 d~G~Y~C~a~n~~g~-~~~~~~~~~l~v~~------~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~p-~i~ 705 (813)
|+|.|.|.|.+.... .........|.|.. +|.+... ......+.+|+.++|.|.+.|. |+| .|+
T Consensus 87 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~-------~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~ 159 (245)
T 4ei6_B 87 DSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVF-------EPSEAEISHTQKATLVCLATGFYPDHVELS 159 (245)
T ss_dssp GCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEE-------CCCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred HCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEe-------CCCcccccCCCceEEEEEEeeEeCCCeEEE
Confidence 999999999863211 11112234566663 2221110 1111235569999999999984 445 899
Q ss_pred EEeCCcccCCCceee---------------ecceEEEECCCCCCC-CEEEEEEEEcCCCc
Q psy14896 706 WTRRGSPLPRNAYFE---------------NFNRILTIPNVKVED-QGEYICRASNDRSA 749 (813)
Q Consensus 706 W~k~g~~l~~~~~~~---------------~~~~~L~i~~v~~~d-~G~Y~C~a~N~~G~ 749 (813)
|+|||..|..+.... ...+.|.|.....+| +|.|+|.|.|....
T Consensus 160 W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 160 WWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp EEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 999999887643321 112358999888888 99999999997543
No 427
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.62 E-value=6.2e-17 Score=158.50 Aligned_cols=193 Identities=16% Similarity=0.239 Sum_probs=100.2
Q ss_pred ceEEEEEEcCceeEEeecEEEEEeecccccccCCCce-eccCCCceEEeCCCCCC--C-ccEEEEccCCCCCcccCCCeE
Q psy14896 543 GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEI-GNQNWGKAMFCDPPTNY--P-GVNYYWARDYFPNFVEEDKRV 618 (813)
Q Consensus 543 G~Y~C~a~n~~g~~~s~~~~l~v~~~p~~~~~~~~~~-~~~g~~~~l~C~~~~~~--p-~~~v~W~k~~~~~~~~~~~~~ 618 (813)
|.|.|..+|..+. .. ....+..|..+...+.+.. +..|+.++|.|.+.... | ...|+|+|||.++........
T Consensus 1 ~~~~~~~~~~~~~--c~-~~~~~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~ 77 (240)
T 4acp_A 1 GTKSCDKTHTCPP--CP-APELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPR 77 (240)
T ss_dssp -------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCC
T ss_pred CceeeeeeecCCC--CC-ccccCCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccc
Confidence 7899999987663 11 1111122223333333444 45699999999995444 4 458999999976321110111
Q ss_pred EEeeCc------cEEEEeecccCCeeEEEEEEeeecCccccCceee--EEEccCCCccccccCCCCCCCCCcCCCCCCeE
Q psy14896 619 FVSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP--LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV 690 (813)
Q Consensus 619 ~~~~~~------~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~--l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v 690 (813)
....++ .|.|.....+|.|.|+|.|.|..+..... ..+. +.+..+|.+... +. ......|+.+
T Consensus 78 ~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~-~~i~~~~~~~~~P~V~v~--~~------~~~~~~g~~~ 148 (240)
T 4acp_A 78 EEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIE-KTISKAKGQPREPQVYTL--PP------SRDELTKNQV 148 (240)
T ss_dssp EEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEE-EEECCCCSCCBCCEEEEE--CC------CGGGGGSSEE
T ss_pred eECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCcccc-ccccccCCCCCCCEEEEE--CC------ChHHhcCCce
Confidence 111233 47777777889999999999987642111 1111 112233333221 11 0122348999
Q ss_pred EEEEEecC-CCCC-eEEEEeCCcccCCCcee----e-----ecceEEEECCCCCCCCEEEEEEEEcCC
Q psy14896 691 RLECVAFG-YPVP-SYNWTRRGSPLPRNAYF----E-----NFNRILTIPNVKVEDQGEYICRASNDR 747 (813)
Q Consensus 691 ~l~C~~~g-~P~p-~i~W~k~g~~l~~~~~~----~-----~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 747 (813)
+|.|.+.| .|++ .|+|+|||..+...... . ...+.|.|.....+|.|.|+|+|.|..
T Consensus 149 ~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 149 SLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp EEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred EEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECC
Confidence 99999998 4554 89999999987532211 1 112457777766678999999999974
No 428
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.62 E-value=1.7e-15 Score=146.97 Aligned_cols=170 Identities=15% Similarity=0.200 Sum_probs=108.5
Q ss_pred CCceeccCCCceEEeCCCCCCC--ccEEEEccCC--CCCc--c------------cCCCeEEEeeC-----ccEEEEeec
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYP--GVNYYWARDY--FPNF--V------------EEDKRVFVSYD-----GALYFSALE 632 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~--~~~~--~------------~~~~~~~~~~~-----~~L~i~~~~ 632 (813)
.+..+.+|+.++|.|.+ .+.+ .+.|.|+|+. .... + ....|+.+..+ .+|+|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 8 GPGLVQPSQTLSLTCTV-SGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp CCCEECTTCCEEEEEEE-CSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCeeecCCCcEEEEEEE-CCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 34567889999999998 4543 5789999863 2110 0 11346666532 269999999
Q ss_pred ccCCeeEEEEEEeeecCccccCceeeEEEccCC-CccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CCC-eEEEEeC
Q psy14896 633 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVP-SYNWTRR 709 (813)
Q Consensus 633 ~~d~G~Y~C~a~n~~g~~~~~~~~~~l~v~~~p-~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~p-~i~W~k~ 709 (813)
.+|+|.|.|.+.|..+..........|.|...+ ..+.+.. ......+.+|+.++|.|.+.|. |.| .|+|+++
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~-----~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 161 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYP-----LAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSG 161 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEE-----ECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGG
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEe-----ccCChhhccCCcEEEEEEEeeeEcCCcEEEEccC
Confidence 999999999999875321111223567777421 1111110 0001245789999999999987 888 9999999
Q ss_pred CcccCCCc--e-eeec----ceEEEECCCCCCCCEEEEEEEEcCCCceEEEE
Q psy14896 710 GSPLPRNA--Y-FENF----NRILTIPNVKVEDQGEYICRASNDRSALESSV 754 (813)
Q Consensus 710 g~~l~~~~--~-~~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~ 754 (813)
|..+.... . .... .+.|+ ....+| |.|+|.|.|..|......
T Consensus 162 g~~~~~~~~~~~~~~g~~~~~s~L~--~~~~~~-g~ytC~v~n~~~~~~~~~ 210 (215)
T 1c5d_H 162 ALSSDVHTFPAVLQSGLYTLTSSVT--SSTWPS-QTVTCNVAHPASSTKVDK 210 (215)
T ss_dssp TTCCSCCBCCCEEETTEEEEEEEEE--ESSTTT-SCCEEEEEEGGGTEEEEE
T ss_pred CccCceEecCcccCCCCEEEEEEEe--cccCCC-CeEEEEEEeCCCCccEEE
Confidence 98653211 1 1111 12244 444456 999999999988765444
No 429
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.62 E-value=6.8e-16 Score=152.79 Aligned_cols=166 Identities=17% Similarity=0.240 Sum_probs=109.3
Q ss_pred CCCceeccCCCceEEeCCCCCCCccEEEEccCCCCC---------------cccCCCeEEEee----CccEEEEeecccC
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPN---------------FVEEDKRVFVSY----DGALYFSALEQID 635 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~---------------~~~~~~~~~~~~----~~~L~i~~~~~~d 635 (813)
+....+.+|+.++|.|.+ .+ +.+.|.|+|..... ......|+.+.. +.+|+|.+++.+|
T Consensus 9 p~~v~v~~G~~v~L~C~~-~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D 86 (240)
T 3q5y_A 9 PRHIIKEKGGRSVLTCIP-IS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELED 86 (240)
T ss_dssp CSEEEEETTCCEEEEEEC-CT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGG
T ss_pred cceeeecCCCcEEEEEEe-CC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhH
Confidence 344567889999999998 44 77899999932100 001124555543 2359999999999
Q ss_pred CeeEEEEEEeeecCccccCceeeEEEcc------CCCccccccCCCCCCCCCcCCCCCCeEEEEEEecC-CCCC-eEEEE
Q psy14896 636 AGNYSCNVQSKVSDTGRNGPFFPLKVFP------HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG-YPVP-SYNWT 707 (813)
Q Consensus 636 ~G~Y~C~a~n~~g~~~~~~~~~~l~v~~------~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g-~P~p-~i~W~ 707 (813)
+|.|.|.|.+..+..........|.|.. +|.+... ......+.+|+.++|.|.+.| .|+| .|+|+
T Consensus 87 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~-------~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~ 159 (240)
T 3q5y_A 87 SAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLF-------EPSKAEIANKQKATLVCLARGFFPDHVELSWW 159 (240)
T ss_dssp CEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEE-------CCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEe-------CCchhhcccCCceEEEEEEeeEECCCeEEEEE
Confidence 9999999984322112222234566653 2211110 111133556999999999998 5656 79999
Q ss_pred eCCcccCCCceee-----e------cceEEEECCCCCCC-CEEEEEEEEcCCCc
Q psy14896 708 RRGSPLPRNAYFE-----N------FNRILTIPNVKVED-QGEYICRASNDRSA 749 (813)
Q Consensus 708 k~g~~l~~~~~~~-----~------~~~~L~i~~v~~~d-~G~Y~C~a~N~~G~ 749 (813)
|||.+|..+.... . ..+.|.|..+..+| .|.|+|.|.|....
T Consensus 160 ~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 160 VNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp ETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred ECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 9999987644321 1 12349999999988 77999999997543
No 430
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.62 E-value=1.7e-15 Score=130.01 Aligned_cols=88 Identities=17% Similarity=0.218 Sum_probs=77.5
Q ss_pred CcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeeec----ceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEE
Q psy14896 681 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENF----NRILTIPNVKVEDQGEYICRASNDRSALESSVTI 756 (813)
Q Consensus 681 ~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 756 (813)
...+.+|++++|.|.+.|.|.|.|+|+|+|..+..+.++... ...|.|.+++.+|+|.|+|.|.|..|..+..+.|
T Consensus 16 ~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 95 (114)
T 2cqv_A 16 DQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNL 95 (114)
T ss_dssp SEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEE
T ss_pred CeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEE
Confidence 367899999999999999999999999999999876554332 5689999999999999999999999999999999
Q ss_pred EEEcCCcccccC
Q psy14896 757 SIQAEPNFTIPL 768 (813)
Q Consensus 757 ~V~~~P~~~~~~ 768 (813)
.|..+|..+..+
T Consensus 96 ~V~~~p~~P~~p 107 (114)
T 2cqv_A 96 TVVDKPDPPAGT 107 (114)
T ss_dssp EEECSCSCCCCC
T ss_pred EEECCCCCCCCC
Confidence 999988766544
No 431
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.62 E-value=2.9e-15 Score=145.37 Aligned_cols=173 Identities=16% Similarity=0.185 Sum_probs=104.6
Q ss_pred CCceeecCCCccccccEEEEeeeccC--CCCeEEEeeccc--ccccccc------cccccCCCccEEee--C--CeEEEc
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGY--PNPSYEWFKEDY--VQDRLVA------NLIDPLSDKRFTLS--G--GNLIIN 261 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~--P~p~v~W~k~g~--~l~~~~~------~~~~~~~~~~~~~~--~--~~l~i~ 261 (813)
|..+.+.+| ++|+|.|.+.+. +.+.+.|||... .+..... .........|+.+. + .+|.|.
T Consensus 6 p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (215)
T 3nl4_H 6 SGGRLVTPG-----TPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKIT 80 (215)
T ss_dssp ECCCEECTT-----CCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEES
T ss_pred CCCEEEcCC-----CcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEEC
Confidence 455666666 779999999763 467999998532 1110000 00011122444443 2 248888
Q ss_pred CCccccCCeeEEEEeecCcee---eEeeeeEEeee----eecccccCCCCceeecCCCeEEEecCCCCCC-cceEEEeec
Q psy14896 262 DPRQVEDRGSYHCKASNKFGS---IISESVQLAFG----FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP-GVNYYWARD 333 (813)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~---~~s~~~~l~v~----~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p-~~~v~W~k~ 333 (813)
+. +.+|+|.|.|.+.|..+. .....+.|.|. ..|.+........+..|+.++|.|.+..+.| ...+.|+|+
T Consensus 81 ~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~ 159 (215)
T 3nl4_H 81 SP-TTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSG 159 (215)
T ss_dssp SC-CGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGG
T ss_pred CC-CcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeC
Confidence 85 899999999999987542 22444566665 2233332333345567889999999755445 457889999
Q ss_pred cccccccCCccEEEccCccEEE---eeeeecCCeeeEEEEeeeccc
Q psy14896 334 YFPNFVEEDKRVFVSYDGALYF---SALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~L~i---~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
|..+....... ....++.+.+ ..+...| |.|+|.|.|..+.
T Consensus 160 g~~~~~~~~~~-~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~ 203 (215)
T 3nl4_H 160 TLTNGVRTFPS-VRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATN 203 (215)
T ss_dssp TBCTTEEECCC-EECTTSCEEEEEEEEECC----CCEEEEEEGGGT
T ss_pred CEECCeEecCc-eECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCC
Confidence 98654333322 2445677666 5677888 9999999998764
No 432
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.61 E-value=2.3e-16 Score=152.06 Aligned_cols=158 Identities=15% Similarity=0.241 Sum_probs=96.7
Q ss_pred ccCCCceEEeCCCCCCC----ccEEEEccCCCCCcccCCCeEEEeeCccEEEEe---eccc---CCeeEEEEEEeeecCc
Q psy14896 581 NQNWGKAMFCDPPTNYP----GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSA---LEQI---DAGNYSCNVQSKVSDT 650 (813)
Q Consensus 581 ~~g~~~~l~C~~~~~~p----~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~---~~~~---d~G~Y~C~a~n~~g~~ 650 (813)
.+|+.++|.|.+ .|.+ .+.|+|+|++.++............+|+|.|.. +... |+|.|+|.|.|..+..
T Consensus 16 ~~G~~v~L~C~~-~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~ 94 (207)
T 1l6x_A 16 MISRTPEVTCVV-VDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 94 (207)
T ss_dssp CTTSCCEEEEEE-EEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSS
T ss_pred ecCCceEEEEEE-ecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCc
Confidence 689999999999 4554 359999999965322111122233456666543 3344 4999999999987653
Q ss_pred cccCceeeE--EEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CC-CeEEEEeCCcccCCCcee---eecc
Q psy14896 651 GRNGPFFPL--KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PV-PSYNWTRRGSPLPRNAYF---ENFN 723 (813)
Q Consensus 651 ~~~~~~~~l--~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~-p~i~W~k~g~~l~~~~~~---~~~~ 723 (813)
... ..+.+ .+..+|.+... +. . .....|..++|.|.+.|. |+ +.|+|+|||.++...... ...+
T Consensus 95 ~~~-~~v~~~~~~~~~P~v~~~--~~-----~-~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~ 165 (207)
T 1l6x_A 95 PIE-KTISKAKGQPREPQVYTL--PP-----S-RDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSD 165 (207)
T ss_dssp CEE-EEECCCCSCCBCCEEEEE--CC-----C-GGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTT
T ss_pred ceE-EEeccCCCCCcCCEEEEE--CC-----C-hHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCC
Confidence 111 01111 22333332211 11 0 112246679999999985 54 399999999987643211 1112
Q ss_pred ------eEEEECCCCCCCCEEEEEEEEcCCC
Q psy14896 724 ------RILTIPNVKVEDQGEYICRASNDRS 748 (813)
Q Consensus 724 ------~~L~i~~v~~~d~G~Y~C~a~N~~G 748 (813)
+.|.|.....+|.|.|+|.|.|...
T Consensus 166 gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 166 GSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp SCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCEEEEEEEEECHHHcCCCCEEEEEEEcCCc
Confidence 2456666666789999999999854
No 433
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.61 E-value=1.8e-15 Score=171.13 Aligned_cols=165 Identities=18% Similarity=0.256 Sum_probs=115.6
Q ss_pred ccccEEEEeee-ccCCCCeEEEeeccccccccccccccc-----CCCccEEeeCCeEEEcCCccccCCeeEEEEeecCce
Q psy14896 208 ILNDITLSCYA-GGYPNPSYEWFKEDYVQDRLVANLIDP-----LSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFG 281 (813)
Q Consensus 208 ~g~~v~l~C~~-~g~P~p~v~W~k~g~~l~~~~~~~~~~-----~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g 281 (813)
+|++++|.|.+ .+.|.+.|+|||++..+..... ... ..+......+++|.|.+. +.+|+|.|+|.|.|..|
T Consensus 380 ~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~--~~~~~~~~~~~r~~~~~~~~L~i~~v-~~~D~G~Y~C~~~n~~~ 456 (581)
T 3o3u_N 380 IGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKV--LSPQGGGPWDSVARVLPNGSLFLPAV-GIQDEGIFRCQAMNRNG 456 (581)
T ss_dssp TTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEE--CCSCCSSGGGGTSEECTTSCEEESSC-CGGGCEEEEEEEECTTS
T ss_pred cCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEe--cccCCCCCcCCcEEEcCCceEEEecc-ccccCeEEEEEEEcCCC
Confidence 45889999999 7889999999999874321100 000 012223344678999886 89999999999999998
Q ss_pred eeEeeeeEEeeeeecc-cccCCCCceeecCCCe-EEEecCCCCCCcceEEEeeccccccccCCccEEEc-------cC--
Q psy14896 282 SIISESVQLAFGFIGE-FNLKRAPEIGNQNWGK-AMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS-------YD-- 350 (813)
Q Consensus 282 ~~~s~~~~l~v~~~~~-~~~~~~~~~~~~~~~~-~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~-------~~-- 350 (813)
...+..+.|.|..+|. +.+......+..+... .|.|.+..++|.++|+|++||+++..... ++.+. ..
T Consensus 457 ~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~-~~~~~~~~~~~~~~g~ 535 (581)
T 3o3u_N 457 KETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEK-GVSVKEQTRRHPETGL 535 (581)
T ss_dssp CEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTST-TEEEEEEEEECTTTCC
T ss_pred ceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCC-eEEEEeeeEEcCCCce
Confidence 8766778888876554 3333444455566555 46999765579999999999988643322 22221 22
Q ss_pred ----ccEEEeeee-ecCCeeeEEEEeeeccc
Q psy14896 351 ----GALYFSALE-QIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 351 ----~~L~i~~v~-~~D~G~Y~C~a~n~~g~ 376 (813)
.+|.|.++. .+|.|.|+|.|.|..+.
T Consensus 536 y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 536 FTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp EEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred EEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 258899988 45578999999998643
No 434
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.61 E-value=1.2e-15 Score=154.57 Aligned_cols=168 Identities=15% Similarity=0.268 Sum_probs=112.3
Q ss_pred CCCceeccCCCceEEeCCCCCCCccEEEEccCCC--CCc------------c---cCCCeEEEeeC----ccEEEEeecc
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYF--PNF------------V---EEDKRVFVSYD----GALYFSALEQ 633 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~--~~~------------~---~~~~~~~~~~~----~~L~i~~~~~ 633 (813)
+....+.+|+.++|.|.+ .+.|.+.|.|+|++. ... . ....|+.+..+ .+|.|.+++.
T Consensus 31 p~~v~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 109 (279)
T 2wbj_D 31 PSWVISKSGTSVKIECRS-LDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHP 109 (279)
T ss_dssp CSEEEEETTSCEEEEEEE-SSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCG
T ss_pred CCeEEecCCCeEEEEEEe-CCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCc
Confidence 344567889999999999 678889999999642 100 0 11356666542 3699999999
Q ss_pred cCCeeEEEEEEeeecCc---cccCceeeEEEccC------CCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CC-C
Q psy14896 634 IDAGNYSCNVQSKVSDT---GRNGPFFPLKVFPH------SNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PV-P 702 (813)
Q Consensus 634 ~d~G~Y~C~a~n~~g~~---~~~~~~~~l~v~~~------p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~-p 702 (813)
+|+|.|.|.|.|..|.. ........|.|... |.+... ......+.+|+.++|.|.+.|. |+ |
T Consensus 110 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~-------~~~~~~~~~g~~v~L~C~~~g~~P~~~ 182 (279)
T 2wbj_D 110 EDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVF-------EPSEAEISHTQKATLVCLATGFYPDHV 182 (279)
T ss_dssp GGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEE-------ECCHHHHHHHSCCEEEEEEEEEBSSCE
T ss_pred cCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEE-------CCCcccccCCCceEEEEEEeeEcCCCc
Confidence 99999999999943210 00112245777642 222110 0111234579999999999987 43 6
Q ss_pred eEEEEeCCcccCCCceee----------e-----cceEEEECCCCCCC-CEEEEEEEEcCCCce
Q psy14896 703 SYNWTRRGSPLPRNAYFE----------N-----FNRILTIPNVKVED-QGEYICRASNDRSAL 750 (813)
Q Consensus 703 ~i~W~k~g~~l~~~~~~~----------~-----~~~~L~i~~v~~~d-~G~Y~C~a~N~~G~~ 750 (813)
.|+|+|||.++..+.... . ..+.|.|.....+| .|.|+|.|.|.....
T Consensus 183 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~ 246 (279)
T 2wbj_D 183 ELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 246 (279)
T ss_dssp EEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCT
T ss_pred EEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCC
Confidence 999999999886543221 1 12358898888765 778999999986544
No 435
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.61 E-value=1.7e-15 Score=153.38 Aligned_cols=186 Identities=14% Similarity=0.211 Sum_probs=112.7
Q ss_pred CCCceeccCCCceEEeCCCCCC--CccEEEEccCCCCC----cc-------------cCCCeEEEeeCc-----cEEEEe
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNY--PGVNYYWARDYFPN----FV-------------EEDKRVFVSYDG-----ALYFSA 630 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~--p~~~v~W~k~~~~~----~~-------------~~~~~~~~~~~~-----~L~i~~ 630 (813)
+....+.+|+.++|.|.+ .+. +.+.+.|||..... .. ....|+.+..++ +|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTS-SEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRS 85 (280)
T ss_dssp CCCCEECTTCCEEEEEEE-CCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECS
T ss_pred CCCEEECCCCcEEEEEEe-eccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 345667889999999998 443 56889999853110 00 012355555332 599999
Q ss_pred ecccCCeeEEEEEEeee---c---CccccCceeeEEEcc-CCCc-----cccccCCCCCCCCCcCCCCCCeEEEEEEecC
Q psy14896 631 LEQIDAGNYSCNVQSKV---S---DTGRNGPFFPLKVFP-HSNF-----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 698 (813)
Q Consensus 631 ~~~~d~G~Y~C~a~n~~---g---~~~~~~~~~~l~v~~-~p~~-----~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g 698 (813)
++.+|+|.|.|.+.|.. | ..........|.|.. ++.. .....+..+.......+.+|++|+|.|.+.+
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~v~~G~~v~L~C~~~~ 165 (280)
T 3fku_X 86 LRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPSVSKGLRQTATLTCTGNS 165 (280)
T ss_dssp CCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSEEEECTTCCEEEEEECCC
T ss_pred CChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCcEEEecCCCEEEEEEecC
Confidence 99999999999999861 0 001111234577765 1100 0000000001111167899999999999998
Q ss_pred -CC-CCeEEEEeC--CcccC------------CCceee----ecceEEEECCCCCCCCEEEEEEEEcCCCc---eEEEEE
Q psy14896 699 -YP-VPSYNWTRR--GSPLP------------RNAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSA---LESSVT 755 (813)
Q Consensus 699 -~P-~p~i~W~k~--g~~l~------------~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~---~~~~~~ 755 (813)
.+ .+.+.|||. +..+. ...++. .....|+|.+++.+|+|.|.|.|.|..+. -.....
T Consensus 166 ~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~g~~t~ 245 (280)
T 3fku_X 166 NNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSAVVFGGGTK 245 (280)
T ss_dssp CCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETTTTEEEEBCCCE
T ss_pred CCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCCCCceEECCCEE
Confidence 44 379999983 33221 011111 12346999999999999999999997632 223456
Q ss_pred EEEEcC
Q psy14896 756 ISIQAE 761 (813)
Q Consensus 756 l~V~~~ 761 (813)
|.|...
T Consensus 246 l~V~~~ 251 (280)
T 3fku_X 246 LTVLGQ 251 (280)
T ss_dssp EEEC--
T ss_pred EEECCC
Confidence 777543
No 436
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.61 E-value=8.6e-15 Score=137.48 Aligned_cols=202 Identities=17% Similarity=0.256 Sum_probs=138.9
Q ss_pred CCCceeccCCCceEEeCCCCCCC---ccEEEEccCCCCCcccCCCeEEEeeCccEEEEeecccCCeeEEEEEEeeecCcc
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYP---GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTG 651 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p---~~~v~W~k~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 651 (813)
+.-.....|+.++|+|.+..|.| +..++|+|||.++ . ...++|.|..+...|+|.|+|++.|..|-..
T Consensus 9 P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~I--s-------GaT~tLti~s~t~sdSG~YqCvVTDa~Gcs~ 79 (304)
T 3shs_A 9 SNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPH--E-------NNTATLTVADATSENAGSYKVTVQDTDTMTS 79 (304)
T ss_dssp ESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEEC--S-------CCSSEEEESSCCGGGCEEEEEEEEETTTCCE
T ss_pred CCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccc--c-------CCcceEEeeeccccCCeEEEEEEEECCCCee
Confidence 34455678999999999977878 5689999998652 1 1345799999999999999999999876543
Q ss_pred ccCceeeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEe--c-CCC-----CCeEEEEeCCcccCCCceeeecc
Q psy14896 652 RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA--F-GYP-----VPSYNWTRRGSPLPRNAYFENFN 723 (813)
Q Consensus 652 ~~~~~~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~--~-g~P-----~p~i~W~k~g~~l~~~~~~~~~~ 723 (813)
... .+.+.....+. ..+..| .+..+..|..+.|.+.+ . |.| ...++|+||+..+.. .
T Consensus 80 tSs-~VtVT~~a~l~-i~it~P------~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Isg-------A 144 (304)
T 3shs_A 80 VES-EVFLMEEAELI-VNITEP------QHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDT-------T 144 (304)
T ss_dssp EEC-CCEEECBCCEE-EEESSC------SEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEES-------S
T ss_pred eee-eEEEeccCcee-EEecCC------CceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccC-------c
Confidence 322 22233222211 111111 12345678899999988 5 455 359999999987743 3
Q ss_pred eEEEECCCCCCCCEEEEEEEEcCCCc--eEEEEEEEEEcCCcccccCCceeecCCCeEEEEEEEc--------ccCCc--
Q psy14896 724 RILTIPNVKVEDQGEYICRASNDRSA--LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAF--------GVPDV-- 791 (813)
Q Consensus 724 ~~L~i~~v~~~d~G~Y~C~a~N~~G~--~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~--------g~p~~-- 791 (813)
..|++......++|.|+|++.|..|. .+.++.+.+..-+.-..-....++..|+.+.|.-.+. |.|..
T Consensus 145 q~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (304)
T 3shs_A 145 QDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTI 224 (304)
T ss_dssp SEEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECEEEEEECCCSEEEEETTSCEEECCEEEEECCSCCTTCCEEEE
T ss_pred cccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEccccchhheEeehhhcCcEEEEEEEEeeccccCCCCCCceEE
Confidence 47888899999999999999999774 4555666655444333334566788899998877653 44543
Q ss_pred eEEEE--ECCE
Q psy14896 792 TYSWF--RNGE 800 (813)
Q Consensus 792 ~v~W~--k~g~ 800 (813)
++.|| |+|+
T Consensus 225 ~~~~~~~~~~~ 235 (304)
T 3shs_A 225 KYNWYLQREGQ 235 (304)
T ss_dssp EEEEEEECTTC
T ss_pred EEEEEEeecCc
Confidence 57887 4554
No 437
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.61 E-value=8.1e-15 Score=149.29 Aligned_cols=189 Identities=15% Similarity=0.145 Sum_probs=115.9
Q ss_pred CCCceeecCCCccccccEEEEeeeccCC--CCeEEEeeccc--ccccccc-------cccccCCCccEEee------CCe
Q psy14896 195 QPTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKEDY--VQDRLVA-------NLIDPLSDKRFTLS------GGN 257 (813)
Q Consensus 195 ~p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g~--~l~~~~~-------~~~~~~~~~~~~~~------~~~ 257 (813)
+|..+.+.+| ++++|.|.+.+.| .+.|.|||+.. .+..... .........|+... +.+
T Consensus 28 ~p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 102 (291)
T 2gki_A 28 QSGPELVKPG-----ASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAY 102 (291)
T ss_dssp ECCCEEECTT-----CCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEE
T ss_pred cCCcEEecCC-----CCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEE
Confidence 4556777666 7799999998877 68999999742 1110000 00001112344332 246
Q ss_pred EEEcCCccccCCeeEEEEeecCc-e---eeEeeeeEEeeeee--------------cccccC--CCCceeecCCCeEEEe
Q psy14896 258 LIINDPRQVEDRGSYHCKASNKF-G---SIISESVQLAFGFI--------------GEFNLK--RAPEIGNQNWGKAMFC 317 (813)
Q Consensus 258 l~i~~~~~~~d~G~Y~C~a~n~~-g---~~~s~~~~l~v~~~--------------~~~~~~--~~~~~~~~~~~~~l~C 317 (813)
|.|.+. +.+|+|.|+|.+.|.. | ......+.|.|..+ +.+.+. +....+.+|+.++|.|
T Consensus 103 L~I~~v-~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C 181 (291)
T 2gki_A 103 MELSSL-TSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSC 181 (291)
T ss_dssp EEECSC-CGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEE
T ss_pred EEECcC-CHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEE
Confidence 888885 8999999999999874 2 11223456666551 122222 3345678999999999
Q ss_pred cCCCCCCcc------eEEEeecc--cccc--c--------cCCccEEEccC---ccEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 318 DPPTNYPGV------NYYWARDY--FPNF--V--------EEDKRVFVSYD---GALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 318 ~~~~~~p~~------~v~W~k~~--~~~~--~--------~~~~~~~~~~~---~~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
.+ .+.|.+ .+.|+|++ .... . ....|+.+..+ .+|.|.+++.+|+|.|+|.|.|...
T Consensus 182 ~~-~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~- 259 (291)
T 2gki_A 182 KS-SQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHM- 259 (291)
T ss_dssp EE-SSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTE-
T ss_pred Ec-CCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCc-
Confidence 96 455655 99999973 3211 1 01345544322 3799999999999999999998432
Q ss_pred cCCCCCceeeEEccCC
Q psy14896 377 TGRNGPFFPLKVFPHS 392 (813)
Q Consensus 377 ~~~~s~~~~l~v~~~~ 392 (813)
........|.|...+
T Consensus 260 -~~fg~gt~l~v~~~~ 274 (291)
T 2gki_A 260 -YTFGSGTKLEIKHHH 274 (291)
T ss_dssp -EEECCCEEEEEECC-
T ss_pred -eEEcCCEEEEEEeeE
Confidence 112223566665543
No 438
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.61 E-value=1.9e-15 Score=148.12 Aligned_cols=174 Identities=15% Similarity=0.215 Sum_probs=107.9
Q ss_pred CCceeecCCCccccccEEEEeeeccCCC----CeEEEeecc--cccccccc------cccccCCCccEEee------CCe
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYPN----PSYEWFKED--YVQDRLVA------NLIDPLSDKRFTLS------GGN 257 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P~----p~v~W~k~g--~~l~~~~~------~~~~~~~~~~~~~~------~~~ 257 (813)
|..+.+.+| ++++|.|.+.+.|. +.|.|||++ ..+..... .........|+.+. +.+
T Consensus 7 p~~~~v~~G-----~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 81 (228)
T 3bae_H 7 SGPGLLKPS-----QTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVF 81 (228)
T ss_dssp ECCSEECTT-----CCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEE
T ss_pred CCceeecCC-----CeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEE
Confidence 445566566 77999999998775 899999974 22110000 00111223455543 246
Q ss_pred EEEcCCccccCCeeEEEEeecCce------e--eEeeeeEEeeee----ecccccCCCCceeecCCCeEEEecCCCCCCc
Q psy14896 258 LIINDPRQVEDRGSYHCKASNKFG------S--IISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325 (813)
Q Consensus 258 l~i~~~~~~~d~G~Y~C~a~n~~g------~--~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~ 325 (813)
|.|.+. +.+|+|.|.|.|.|..| . .....+.|.|.. +|.+........+..|+.++|.|.+....|.
T Consensus 82 L~I~~v-~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~ 160 (228)
T 3bae_H 82 MKITSV-DTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPE 160 (228)
T ss_dssp EEECSC-CGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSS
T ss_pred EEEcCC-CcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCC
Confidence 888885 89999999999998754 1 122346677653 2222222222335678889999997555587
Q ss_pred c-eEEEeeccccccccCCccEEEc----cCccEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 326 V-NYYWARDYFPNFVEEDKRVFVS----YDGALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 326 ~-~v~W~k~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
+ .++|++++..+.......+... ..+.|.|..+..+| |.|+|.|.|..+.
T Consensus 161 p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~ 215 (228)
T 3bae_H 161 PVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASS 215 (228)
T ss_dssp CCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred CEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCC
Confidence 7 9999999876422211111111 12358888888766 9999999998874
No 439
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.60 E-value=2.7e-15 Score=127.57 Aligned_cols=81 Identities=19% Similarity=0.219 Sum_probs=70.7
Q ss_pred CCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceee-----------ecceEEEECCCCCCCCEEEEEEEEcCCCceEE
Q psy14896 684 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE-----------NFNRILTIPNVKVEDQGEYICRASNDRSALES 752 (813)
Q Consensus 684 ~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~-----------~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 752 (813)
...+..+.|.|.+.|+|.|.|+|+|||.+|..+.+.. ...+.|.|.++..+|+|.|+|+|.|.+|.+++
T Consensus 12 ~~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~ 91 (126)
T 1he7_A 12 AVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASA 91 (126)
T ss_dssp CCCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEE
T ss_pred CccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEE
Confidence 3467899999999999999999999999998765421 12468999999999999999999999999999
Q ss_pred EEEEEEEcCCcc
Q psy14896 753 SVTISIQAEPNF 764 (813)
Q Consensus 753 ~~~l~V~~~P~~ 764 (813)
++.|.|..+|.-
T Consensus 92 t~~l~v~~~P~~ 103 (126)
T 1he7_A 92 SIMAAFMDNPFE 103 (126)
T ss_dssp EEEECCCSCTTS
T ss_pred EEEEEEEcCCCC
Confidence 999999988854
No 440
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.60 E-value=1.7e-14 Score=142.68 Aligned_cols=178 Identities=14% Similarity=0.192 Sum_probs=111.1
Q ss_pred ceeeCCCceeecCCCccccccEEEEeeeccC--CCCeEEEeecc--ccccccccc------ccccC-CCccEEee-----
Q psy14896 191 YFIKQPTDVVFDLSKRSILNDITLSCYAGGY--PNPSYEWFKED--YVQDRLVAN------LIDPL-SDKRFTLS----- 254 (813)
Q Consensus 191 ~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~--P~p~v~W~k~g--~~l~~~~~~------~~~~~-~~~~~~~~----- 254 (813)
.++..|..+.+.+| ++++|.|.+.+. +.+.|.|||+. ..+...... ..... ...|+.+.
T Consensus 3 ~v~q~p~~v~~~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~ 77 (242)
T 1hxm_B 3 HLEQPQISSTKTLS-----KTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPET 77 (242)
T ss_dssp EEECCCSEEEEETT-----CCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTT
T ss_pred ccCcCCceEEecCC-----CcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCC
Confidence 34555677777777 779999999875 67899999964 222111000 00111 34566543
Q ss_pred -CCeEEEcCCccccCCeeEEEEeecCc------eeeEeeeeEEeeeee-------cccccC-CCCceeecCCCeEEEecC
Q psy14896 255 -GGNLIINDPRQVEDRGSYHCKASNKF------GSIISESVQLAFGFI-------GEFNLK-RAPEIGNQNWGKAMFCDP 319 (813)
Q Consensus 255 -~~~l~i~~~~~~~d~G~Y~C~a~n~~------g~~~s~~~~l~v~~~-------~~~~~~-~~~~~~~~~~~~~l~C~~ 319 (813)
+.+|.|.+. +.+|+|.|.|.+.+.. .......+.|.|... |.+.+. +....+..|+.++|.|.+
T Consensus 78 ~~~~L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~ 156 (242)
T 1hxm_B 78 STSTLTIHNV-EKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLL 156 (242)
T ss_dssp TEEEEEECSC-CGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEE
T ss_pred cEEEEEECCC-CcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEE
Confidence 236888885 8999999999999753 112234567777652 223332 222344568889999997
Q ss_pred CCCCCc-ceEEEeeccc-cccccCCccEEEccC------ccEEEeeeeecCCeeeEEEEeeecccc
Q psy14896 320 PTNYPG-VNYYWARDYF-PNFVEEDKRVFVSYD------GALYFSALEQIDAGNYSCNVQSKVSDT 377 (813)
Q Consensus 320 ~~~~p~-~~v~W~k~~~-~~~~~~~~~~~~~~~------~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 377 (813)
.+..|. +.++|++++. ++.......... .+ ..|.|..+.. | |.|+|.|.|..+..
T Consensus 157 ~g~~P~~~~v~W~~~~~~~l~~~~~~~~~~-~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~ 219 (242)
T 1hxm_B 157 EKFFPDVIKIHWEEKKSNTILGSQEGNTMK-TNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKN 219 (242)
T ss_dssp EEESSCCEEEEEEESSSCCCCCCEECCCEE-CSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGG
T ss_pred eeEECCCeEEEEEcCCCEeecCccccceec-CCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCC
Confidence 644575 8999999987 442111111111 22 2577877664 5 99999999988753
No 441
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.60 E-value=1.3e-15 Score=151.12 Aligned_cols=167 Identities=17% Similarity=0.248 Sum_probs=96.4
Q ss_pred CceeccCCCceEEeCCCCCCC--ccEEEEccCCC--CCc-c--------------cCCCeEEEeeC-----ccEEEEeec
Q psy14896 577 PEIGNQNWGKAMFCDPPTNYP--GVNYYWARDYF--PNF-V--------------EEDKRVFVSYD-----GALYFSALE 632 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~p--~~~v~W~k~~~--~~~-~--------------~~~~~~~~~~~-----~~L~i~~~~ 632 (813)
+..+.+|+.++|.|.+ .+.+ .+.+.|||... ... + ....|+.+..+ .+|+|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (257)
T 3bn9_D 9 GGLVKPGGSLRLSCAA-SGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLR 87 (257)
T ss_dssp CEEECTTCEEEEEEEE-ESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCC
T ss_pred CEEEcCCCcEEEEEEe-ccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCC
Confidence 4567889999999998 5555 57899998642 110 0 11356666542 369999999
Q ss_pred ccCCeeEEEEEEeeecC--------cc--ccCceeeEEEccCC-CccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-C
Q psy14896 633 QIDAGNYSCNVQSKVSD--------TG--RNGPFFPLKVFPHS-NFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-P 700 (813)
Q Consensus 633 ~~d~G~Y~C~a~n~~g~--------~~--~~~~~~~l~v~~~p-~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P 700 (813)
.+|+|.|.|.+.|..|. .. .......|.|...+ ..+.+.. ......+.+|+.++|.|.+.|. |
T Consensus 88 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~-----~~p~~~~~~g~~v~L~C~~~g~~P 162 (257)
T 3bn9_D 88 AEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFP-----LAPSSKSTSGGTAALGCLVKDYFP 162 (257)
T ss_dssp GGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECC-----CCC-----------CCCEEEEEBS
T ss_pred hhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEE-----ecCcccccCCCcEEEEEEEeeEEC
Confidence 99999999999987651 00 11122467777521 1111110 0101235689999999999986 8
Q ss_pred CC-eEEEEeCCcccCCCc---eee-----ecceEEEECCCCCCCCEEEEEEEEcCCCce
Q psy14896 701 VP-SYNWTRRGSPLPRNA---YFE-----NFNRILTIPNVKVEDQGEYICRASNDRSAL 750 (813)
Q Consensus 701 ~p-~i~W~k~g~~l~~~~---~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 750 (813)
.| .|+|+|+|..+.... ... ...+.|.|.++..+| |.|+|.|.|..+..
T Consensus 163 ~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~ 220 (257)
T 3bn9_D 163 EPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 220 (257)
T ss_dssp SCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTE
T ss_pred CCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCc
Confidence 77 999999998753211 001 113468898888888 99999999975443
No 442
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.59 E-value=8.7e-15 Score=144.77 Aligned_cols=180 Identities=13% Similarity=0.177 Sum_probs=111.3
Q ss_pred CceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeeccc--cccccc-----ccccccCCCccEEee-----CCe
Q psy14896 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY--VQDRLV-----ANLIDPLSDKRFTLS-----GGN 257 (813)
Q Consensus 190 P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~--~l~~~~-----~~~~~~~~~~~~~~~-----~~~ 257 (813)
+.++..|..+.+.+| ++++|.|.+.+ |.+.|.|||... .+.... ..........|+.+. +.+
T Consensus 3 ~~v~~~p~~v~v~~G-----~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s 76 (240)
T 3q5y_A 3 SGVVQSPRHIIKEKG-----GRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSE 76 (240)
T ss_dssp CCCEEECSEEEEETT-----CCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEE
T ss_pred cccccCcceeeecCC-----CcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEE
Confidence 345666777888777 77999999987 888999999321 110000 000011122344432 236
Q ss_pred EEEcCCccccCCeeEEEEeec--CceeeEeeeeEEeeee------ecccccC-CCCceeecCCCeEEEecCCCCCCcc-e
Q psy14896 258 LIINDPRQVEDRGSYHCKASN--KFGSIISESVQLAFGF------IGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGV-N 327 (813)
Q Consensus 258 l~i~~~~~~~d~G~Y~C~a~n--~~g~~~s~~~~l~v~~------~~~~~~~-~~~~~~~~~~~~~l~C~~~~~~p~~-~ 327 (813)
|.|.+. +.+|+|.|+|.|.+ .........+.|.|.. +|.+.+. +....+..|+.++|.|.+....|.+ .
T Consensus 77 L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 155 (240)
T 3q5y_A 77 MNMSAL-ELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVE 155 (240)
T ss_dssp EEECSC-CGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEE
T ss_pred EEECcC-ChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeE
Confidence 888885 89999999999983 3222234455666652 2222222 2223445678899999975546766 8
Q ss_pred EEEeeccccccccCC--ccEEEccCc------cEEEeeeeecC-CeeeEEEEeeeccc
Q psy14896 328 YYWARDYFPNFVEED--KRVFVSYDG------ALYFSALEQID-AGNYSCNVQSKVSD 376 (813)
Q Consensus 328 v~W~k~~~~~~~~~~--~~~~~~~~~------~L~i~~v~~~D-~G~Y~C~a~n~~g~ 376 (813)
++|+|||+++..... .......++ .|.|..+..+| .|.|+|.|.|....
T Consensus 156 v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 156 LSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp EEEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EEEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 999999987532110 011222334 38888888888 67999999987653
No 443
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.59 E-value=2e-15 Score=150.50 Aligned_cols=164 Identities=12% Similarity=0.134 Sum_probs=107.9
Q ss_pred CCceeccCCCceEEeCCCCCCCccEEEEccCCCCC----cc-----------cCCC-eEEEeeCcc--EEEEeecccCCe
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPN----FV-----------EEDK-RVFVSYDGA--LYFSALEQIDAG 637 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~----~~-----------~~~~-~~~~~~~~~--L~i~~~~~~d~G 637 (813)
....+.+|+.++|.|.+ .+.+.+.+.|||..... .. .... |+.+..++. |+|.+++.+|+|
T Consensus 9 ~~v~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~DsG 87 (253)
T 3to4_D 9 RWRLVPRGQAVNLRCIL-KNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQGR 87 (253)
T ss_dssp SEEEEESSCCEEEEEEC-SCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCSSCE
T ss_pred CeEEEeCCCcEEEEEEe-CCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChhhCe
Confidence 34567889999999988 57788999999832110 00 0011 666655444 999999999999
Q ss_pred eEEEEEEeeecC---ccccCceeeEEEccC------CCccccccCCCCCCCCCcCCCCCCeEEEEEEecC-CCCC-eEEE
Q psy14896 638 NYSCNVQSKVSD---TGRNGPFFPLKVFPH------SNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG-YPVP-SYNW 706 (813)
Q Consensus 638 ~Y~C~a~n~~g~---~~~~~~~~~l~v~~~------p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g-~P~p-~i~W 706 (813)
.|.|.+.+..+. .........|.|... |.+... ......+..|+.++|.|.+.| .|+| .|+|
T Consensus 88 ~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~-------~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W 160 (253)
T 3to4_D 88 TLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVF-------EPSEAEISHTQKATLVCLATGFYPDHVELSW 160 (253)
T ss_dssp EEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEE-------ECCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred EEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEe-------CCChhhcccCCceEEEEEEceEECCcEEEEE
Confidence 999999876431 111112235666532 211110 001112335789999999998 6666 8999
Q ss_pred EeCCcccCCCceee---------------ecceEEEECCCCCCC-CEEEEEEEEcCC
Q psy14896 707 TRRGSPLPRNAYFE---------------NFNRILTIPNVKVED-QGEYICRASNDR 747 (813)
Q Consensus 707 ~k~g~~l~~~~~~~---------------~~~~~L~i~~v~~~d-~G~Y~C~a~N~~ 747 (813)
+|||.++..+.... ...+.|.|.....+| .|.|+|.|.|..
T Consensus 161 ~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 161 WVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp EETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred EECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 99999886543221 112468888888888 779999999974
No 444
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.59 E-value=9.8e-15 Score=142.36 Aligned_cols=173 Identities=15% Similarity=0.197 Sum_probs=108.3
Q ss_pred CCceeecCCCccccccEEEEeeeccCC--CCeEEEeecc--cccccccc-------cccccCCCccEEee------CCeE
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------GGNL 258 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g--~~l~~~~~-------~~~~~~~~~~~~~~------~~~l 258 (813)
|..+.+.+| ++|+|.|.+.+.| .+.|.|||+. ..+..... .........|+.+. +.+|
T Consensus 7 p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 81 (223)
T 1dee_B 7 SGGGVVQPG-----KSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYL 81 (223)
T ss_dssp ECCCEECTT-----CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEE
T ss_pred CCCEEEcCC-----CcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEE
Confidence 345666566 7799999998865 4789999964 22110000 00111223466543 2368
Q ss_pred EEcCCccccCCeeEEEEeecCce----e-eEeeeeEEeeee----ecccccCCCCceeecCCCeEEEecCCCCCCcc-eE
Q psy14896 259 IINDPRQVEDRGSYHCKASNKFG----S-IISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NY 328 (813)
Q Consensus 259 ~i~~~~~~~d~G~Y~C~a~n~~g----~-~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v 328 (813)
.|.+. +.+|+|.|.|.+.|..| . .....+.|.|.. +|.+........+..|+.++|.|.+....|.+ ++
T Consensus 82 ~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v 160 (223)
T 1dee_B 82 QMNSL-RAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITF 160 (223)
T ss_dssp EECSC-CGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEE
T ss_pred EECCC-CHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEE
Confidence 88885 89999999999998753 1 223445777753 22222212222346788889999976555876 99
Q ss_pred EEee-ccccccccC-------CccEEEccCccEEEeeeee--cCCeeeEEEEeeeccc
Q psy14896 329 YWAR-DYFPNFVEE-------DKRVFVSYDGALYFSALEQ--IDAGNYSCNVQSKVSD 376 (813)
Q Consensus 329 ~W~k-~~~~~~~~~-------~~~~~~~~~~~L~i~~v~~--~D~G~Y~C~a~n~~g~ 376 (813)
+|++ ||.++.... ...+. ..+.|.|..... +|.|.|+|.|.|..+.
T Consensus 161 ~W~~~~g~~l~~~~~~~~~~~~~~~~--~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~ 216 (223)
T 1dee_B 161 SWKYKNNSDISSTRGFPSVLRGGKYA--ATSQVLLPSKDVAQGTNEHVVCKVQHPNGN 216 (223)
T ss_dssp EEEETTSCBCSCEEECCCEEETTEEE--EEEEEEEECTTTTSTTCCEEEEEEECTTCC
T ss_pred EeEccCCCccceeEECCccccCCeEE--EEEEEEEcHHHhccCCCCEEEEEEEeCCCC
Confidence 9999 888753200 01111 123577877765 7899999999998764
No 445
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.58 E-value=1.1e-14 Score=145.24 Aligned_cols=175 Identities=14% Similarity=0.175 Sum_probs=109.4
Q ss_pred eCCCceeecCCCccccccEEEEeeeccCC--CCeEEEeecc--cccccccc-------cccccCCCccEEee------CC
Q psy14896 194 KQPTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------GG 256 (813)
Q Consensus 194 ~~p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g--~~l~~~~~-------~~~~~~~~~~~~~~------~~ 256 (813)
.+|....+.+| ++|+|.|.+.+.| .+.|.|||+. ..+..... .........|+.+. +.
T Consensus 11 ~~p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 85 (261)
T 2xqy_G 11 QQPGAELVKPG-----ASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTV 85 (261)
T ss_dssp ECCSEEEECTT-----CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEE
T ss_pred ECCCCEEEcCC-----CCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEE
Confidence 34566667666 7799999999877 6899999984 22211000 00011123455543 24
Q ss_pred eEEEcCCccccCCeeEEEEeecCcee--eEeeeeEEeeee----ecccccCCCCceeecCCCeEEEecCCCCCCcc-eEE
Q psy14896 257 NLIINDPRQVEDRGSYHCKASNKFGS--IISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYY 329 (813)
Q Consensus 257 ~l~i~~~~~~~d~G~Y~C~a~n~~g~--~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~ 329 (813)
+|.|.+. +.+|+|.|.|.+.|..+. .....+.|.|.. +|.+.+......+..|+.++|.|.+....|.+ .|+
T Consensus 86 sL~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~ 164 (261)
T 2xqy_G 86 YIQLSSL-TSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLT 164 (261)
T ss_dssp EEEECSC-CGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEcCC-CcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEE
Confidence 6888885 899999999999986431 123445677654 22222222223356788889999975445776 999
Q ss_pred EeeccccccccCCccEEE----ccCccEEEeeeeecCCeeeEEEEeeecc
Q psy14896 330 WARDYFPNFVEEDKRVFV----SYDGALYFSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 330 W~k~~~~~~~~~~~~~~~----~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 375 (813)
|++++.++.......+.. ...+.|.|..+..+| |.|+|.|.|...
T Consensus 165 W~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~ 213 (261)
T 2xqy_G 165 WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPAS 213 (261)
T ss_dssp EGGGTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGG
T ss_pred EecCCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCC
Confidence 999998643221111111 112468898888888 999999999654
No 446
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.58 E-value=6.5e-15 Score=146.23 Aligned_cols=178 Identities=17% Similarity=0.202 Sum_probs=110.6
Q ss_pred CceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecc--ccccccc----cc-ccccC-CCccEEeeC-----C
Q psy14896 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED--YVQDRLV----AN-LIDPL-SDKRFTLSG-----G 256 (813)
Q Consensus 190 P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g--~~l~~~~----~~-~~~~~-~~~~~~~~~-----~ 256 (813)
+.++..|..+.+.+| ++++|.| ..+.|.+.|.|||.. ....... .. ..... ...|+.+.. .
T Consensus 3 ~~v~~~p~~v~v~~G-----~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 76 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMG-----QMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYF 76 (245)
T ss_dssp CCCEEECSEEEEETT-----CCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCE
T ss_pred cceEeCCceEEecCC-----CCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceE
Confidence 456677788888777 7799999 667789999999931 1110000 00 00011 114555432 2
Q ss_pred eEEEcCCccccCCeeEEEEeecCc---eeeEeeeeEEeeee------ecccccC-CCCceeecCCCeEEEecCCCCCCcc
Q psy14896 257 NLIINDPRQVEDRGSYHCKASNKF---GSIISESVQLAFGF------IGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGV 326 (813)
Q Consensus 257 ~l~i~~~~~~~d~G~Y~C~a~n~~---g~~~s~~~~l~v~~------~~~~~~~-~~~~~~~~~~~~~l~C~~~~~~p~~ 326 (813)
+|.|.+. +.+|+|.|+|.|.+.. ....+..+.|.|.. +|.+.+. +....+..|+.++|.|.+....|.+
T Consensus 77 sL~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~ 155 (245)
T 4ei6_B 77 TLKIQPT-ALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH 155 (245)
T ss_dssp EEEECSC-CGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSC
T ss_pred EEEECCC-CHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCC
Confidence 6888885 8999999999999532 22224456666653 2333222 2223455688899999975445655
Q ss_pred -eEEEeeccccccccCCccEEEc--------cCc------cEEEeeeeecC-CeeeEEEEeeeccc
Q psy14896 327 -NYYWARDYFPNFVEEDKRVFVS--------YDG------ALYFSALEQID-AGNYSCNVQSKVSD 376 (813)
Q Consensus 327 -~v~W~k~~~~~~~~~~~~~~~~--------~~~------~L~i~~v~~~D-~G~Y~C~a~n~~g~ 376 (813)
.++|+|||.++.. ..+.... .++ .|.|.....+| .|.|+|.|.|....
T Consensus 156 ~~v~W~~~g~~l~~--~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 156 VELSWWVNGKEVHS--GVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp EEEEEEETTEEECT--TEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred eEEEEEECCEECCC--CcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 8999999987432 1111110 133 37788887888 89999999987543
No 447
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.58 E-value=3.3e-15 Score=147.40 Aligned_cols=164 Identities=15% Similarity=0.203 Sum_probs=106.0
Q ss_pred CCceeccCCCceEEeCCCCCCCccEEEEccCCCCCc---c------------cCCCeEEEee----CccEEEEeecccCC
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNF---V------------EEDKRVFVSY----DGALYFSALEQIDA 636 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~~---~------------~~~~~~~~~~----~~~L~i~~~~~~d~ 636 (813)
....+.+|+.++|.|.+ . .+.+.|.|+|++.... + ....|+.+.. +.+|.|.+++.+|+
T Consensus 7 ~~v~v~~G~~v~L~C~~-~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~ 84 (238)
T 1bec_A 7 RNKVAVTGGKVTLSCQQ-T-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQT 84 (238)
T ss_dssp SEEEEETTCCEEEEEEE-S-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGC
T ss_pred CeeEEeCCCcEEEEEEe-C-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccC
Confidence 34567889999999998 3 3578999999642100 0 0134555542 23699999999999
Q ss_pred eeEEEEEEeeecC--ccccCceeeEEEccC------CCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CCC-eEEE
Q psy14896 637 GNYSCNVQSKVSD--TGRNGPFFPLKVFPH------SNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVP-SYNW 706 (813)
Q Consensus 637 G~Y~C~a~n~~g~--~~~~~~~~~l~v~~~------p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~p-~i~W 706 (813)
|.|.|.+.|..+. .........|.|... |.+... .+....+.+|+.++|.|.+.|. |.| .|+|
T Consensus 85 G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~-------~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W 157 (238)
T 1bec_A 85 SVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLF-------EPSKAEIANKQKATLVCLARGFFPDHVELSW 157 (238)
T ss_dssp EEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEE-------CCCSTTCSSSCSCSEEEEEEEEBSCCEEEEE
T ss_pred EEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEE-------CCChHHcccCCceEEEEEEeeEeCCCcEEEE
Confidence 9999999987421 000112245777652 222111 1112346789999999999986 655 9999
Q ss_pred EeCCcccCCCceee-----ecc------eEEEECCCCCCC-CEEEEEEEEcCCC
Q psy14896 707 TRRGSPLPRNAYFE-----NFN------RILTIPNVKVED-QGEYICRASNDRS 748 (813)
Q Consensus 707 ~k~g~~l~~~~~~~-----~~~------~~L~i~~v~~~d-~G~Y~C~a~N~~G 748 (813)
+|||.++..+.... ..+ +.|.|.....+| .|.|+|.|.|...
T Consensus 158 ~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 211 (238)
T 1bec_A 158 WVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGL 211 (238)
T ss_dssp EETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCC
T ss_pred EECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCC
Confidence 99999886653221 112 235555444444 6799999999743
No 448
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.58 E-value=1.5e-15 Score=151.22 Aligned_cols=168 Identities=15% Similarity=0.174 Sum_probs=109.0
Q ss_pred CCCceeccCCCceEEeCCCCCCCccEEEEccCCCCC----cc-----------cCCCeEEEee----CccEEEEeecccC
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPN----FV-----------EEDKRVFVSY----DGALYFSALEQID 635 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~k~~~~~----~~-----------~~~~~~~~~~----~~~L~i~~~~~~d 635 (813)
+....+.+|+.++|.|.+ . .+.+.+.|+|+.... .. ....|+.+.. +.+|.|.+++.+|
T Consensus 10 p~~v~v~~G~~v~L~C~~-~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D 87 (252)
T 1oga_E 10 PKYLFRKEGQNVTLSCEQ-N-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNP 87 (252)
T ss_dssp CSEEEEETTCCEEECCEE-C-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCC
T ss_pred CCeEEEcCCCcEEEEEEe-C-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhh
Confidence 344567899999999998 3 357899999864210 00 1235666653 3479999999999
Q ss_pred CeeEEEEEEeeecCccccCceeeEEEcc------CCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CC-CeEEEE
Q psy14896 636 AGNYSCNVQSKVSDTGRNGPFFPLKVFP------HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PV-PSYNWT 707 (813)
Q Consensus 636 ~G~Y~C~a~n~~g~~~~~~~~~~l~v~~------~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~-p~i~W~ 707 (813)
+|.|.|.+.|..+..........|.|.. +|.+... .+....+.+|+.++|.|.+.|. |. +.|+|+
T Consensus 88 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~-------~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~ 160 (252)
T 1oga_E 88 TAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVF-------EPSEAEISHTQKATLVCLATGFYPDHVELSWW 160 (252)
T ss_dssp CEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEE-------CCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEE-------CCChhhhccCCceEEEEEEeeEcCCCcEEEEE
Confidence 9999999998621101101123566653 2222110 0111234579999999999986 65 499999
Q ss_pred eCCcccCCCceee---------ec------ceEEEECCCCCC-CCEEEEEEEEcCCCceE
Q psy14896 708 RRGSPLPRNAYFE---------NF------NRILTIPNVKVE-DQGEYICRASNDRSALE 751 (813)
Q Consensus 708 k~g~~l~~~~~~~---------~~------~~~L~i~~v~~~-d~G~Y~C~a~N~~G~~~ 751 (813)
|||..+..+.... .. .+.|+|.....+ |.|.|+|.|.|......
T Consensus 161 ~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~~ 220 (252)
T 1oga_E 161 VNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 220 (252)
T ss_dssp ETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCCC
Confidence 9999886553221 11 234888776654 67899999999865443
No 449
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.58 E-value=4.1e-14 Score=132.91 Aligned_cols=192 Identities=15% Similarity=0.172 Sum_probs=120.6
Q ss_pred eeeCCCceeecCCCccccccEEEEeeec-cCC---CCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAG-GYP---NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~-g~P---~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
+...|....+..| +.++|+|.+. |.| ...++|||||..+. . ..++|.+... ...
T Consensus 5 Vs~~P~~~~i~~G-----dsVTLTatVaGGkP~pspyTYqWyKDG~~Is----------G------aT~tLti~s~-t~s 62 (304)
T 3shs_A 5 VSIQSNKRCFLAG-----DGFTLTATVAGDEPLPSNLTYTWTKDDQPHE----------N------NTATLTVADA-TSE 62 (304)
T ss_dssp EEEEESCSSBCTT-----CCEEEEEEEEESSSCCCCEEEEEEETTEECS----------C------CSSEEEESSC-CGG
T ss_pred EEeCCCCccccCC-----CCEEEEEEecCCCCCCCCceEEEEECCcccc----------C------CcceEEeeec-ccc
Confidence 3444566666566 7799999985 667 34899999997541 1 1346666664 799
Q ss_pred CCeeEEEEeecCceeeE-eeeeEEeeeeecccccC-CCCceeecCCCeEEEecC--CCCCC-----cceEEEeecccccc
Q psy14896 268 DRGSYHCKASNKFGSII-SESVQLAFGFIGEFNLK-RAPEIGNQNWGKAMFCDP--PTNYP-----GVNYYWARDYFPNF 338 (813)
Q Consensus 268 d~G~Y~C~a~n~~g~~~-s~~~~l~v~~~~~~~~~-~~~~~~~~~~~~~l~C~~--~~~~p-----~~~v~W~k~~~~~~ 338 (813)
|+|.|+|++.|..|... +..+.+.....+.+.+. +.+.....+..+.|.+.+ .+|.| ..++.|+||+..
T Consensus 63 dSG~YqCvVTDa~Gcs~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~-- 140 (304)
T 3shs_A 63 NAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDV-- 140 (304)
T ss_dssp GCEEEEEEEEETTTCCEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEE--
T ss_pred CCeEEEEEEEECCCCeeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeE--
Confidence 99999999999777542 33343333222222222 222233344556777766 56666 579999999864
Q ss_pred ccCCccEEEccCccEEEeeeeecCCeeeEEEEeeeccccCCCCCceeeEEccCCcccccccCCCCCCCCCcCCCCCCcEE
Q psy14896 339 VEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVR 418 (813)
Q Consensus 339 ~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~ 418 (813)
+.....|++...+..++|.|+|+++|..+. ...+..+.+.+..-+-.. ....+..+..|+.+.
T Consensus 141 --------IsgAq~lT~sS~TateaG~YtV~VTn~~~~-c~~s~~~~i~~~~~~v~~--------~~~~~~~~~~~~~~~ 203 (304)
T 3shs_A 141 --------IDTTQDITIQEFTADKNGVYTVKVWGESED-SAASASTKIMLATMNVDQ--------DVVESKTVALGNEIS 203 (304)
T ss_dssp --------EESSSEEEECSCCGGGCEEEEEEEESSSGG-GCEEEEEEEEECEEEEEE--------CCCSEEEEETTSCEE
T ss_pred --------ccCccccceeeEEecCCeEEEEEEEcCCCC-cccccceEEEEEccccch--------hheEeehhhcCcEEE
Confidence 223336888889999999999999988652 222333444443211100 112335678889988
Q ss_pred EEEEEe
Q psy14896 419 LECVAF 424 (813)
Q Consensus 419 l~C~~~ 424 (813)
|...++
T Consensus 204 ~~~~~~ 209 (304)
T 3shs_A 204 LNYVVS 209 (304)
T ss_dssp ECCEEE
T ss_pred EEEEEe
Confidence 877664
No 450
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.58 E-value=4.7e-15 Score=123.05 Aligned_cols=90 Identities=29% Similarity=0.448 Sum_probs=72.4
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEee--C--CeEEEcCCc
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--G--GNLIINDPR 264 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~--~--~~l~i~~~~ 264 (813)
||.|...|.++.+.+| +++.|.|.+.|.|.|.|+|+|||.+|.. ....++.+. + .+|.|.+.
T Consensus 5 PP~i~~~p~~~~v~~G-----~~~~l~C~~~g~P~p~v~W~k~g~~i~~--------~~~~~~~~~~~~~~~~L~I~~~- 70 (100)
T 3knb_A 5 PPKIEALPSDISIDEG-----KVLTVACAFTGEPTPEVTWSCGGRKIHS--------QEQGRFHIENTDDLTTLIIMDV- 70 (100)
T ss_dssp EEEECCCCSEEEEETT-----SEEEEEEEEEEESCCEEEEEETTEECCT--------TGGGTEEEEECSSEEEEEESSC-
T ss_pred CCEEEeCCCcEEEeCC-----CeEEEEEEEEEecCCEEEEEECceEeee--------eccceeeeecccceEEEEEcCC-
Confidence 6899999999998887 6799999999999999999999987632 222344332 2 25777775
Q ss_pred cccCCeeEEEEeecCceeeEeeeeEEeee
Q psy14896 265 QVEDRGSYHCKASNKFGSIISESVQLAFG 293 (813)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~ 293 (813)
+.+|+|.|+|.|+|..|.. +.++.|.|.
T Consensus 71 ~~~D~G~Y~C~a~N~~G~~-~~~~~l~V~ 98 (100)
T 3knb_A 71 QKQDGGLYTLSLGNEFGSD-SATVNIHIR 98 (100)
T ss_dssp CGGGCEEEEEEEEETTEEE-EEEEEEEEE
T ss_pred CccCCEEEEEEEEECCCEE-EEEEEEEEE
Confidence 8999999999999999987 667788774
No 451
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.57 E-value=4.6e-15 Score=145.36 Aligned_cols=175 Identities=15% Similarity=0.134 Sum_probs=111.7
Q ss_pred CCceeccCCCceEEeCCCCCC--CccEEEEccCCC--CCc--c-----------c-CCCeEEEeeC-----ccEEEEeec
Q psy14896 576 APEIGNQNWGKAMFCDPPTNY--PGVNYYWARDYF--PNF--V-----------E-EDKRVFVSYD-----GALYFSALE 632 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~--p~~~v~W~k~~~--~~~--~-----------~-~~~~~~~~~~-----~~L~i~~~~ 632 (813)
....+.+|+.++|.|.+ .+. +...+.|||... ... + . ...|+.+..+ .+|+|.+++
T Consensus 9 ~~v~~~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (230)
T 1ypz_F 9 ISISRPRDETAQISCKV-FIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLE 87 (230)
T ss_dssp SEEEEETTSCEEEEEEE-CCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCC
T ss_pred CEEEEeCCCcEEEEEEe-eccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCC
Confidence 34567889999999998 443 567899998532 110 0 0 2456766543 269999999
Q ss_pred ccCCeeEEEEEEeeecC-ccccCceeeEEEcc---------CCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CC
Q psy14896 633 QIDAGNYSCNVQSKVSD-TGRNGPFFPLKVFP---------HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PV 701 (813)
Q Consensus 633 ~~d~G~Y~C~a~n~~g~-~~~~~~~~~l~v~~---------~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~ 701 (813)
.+|+|.|.|.+.|..+. .........|.|.. +|..... . +....+..|+.++|.|.+.|. |.
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~------~-p~~~~v~~g~~~~L~C~~~g~~P~ 160 (230)
T 1ypz_F 88 EEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIF------L-PSVAETNLHKTGTYLCLLEAFFPD 160 (230)
T ss_dssp GGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEE------C-CCHHHHHHHSCEEEEEEEEEESSC
T ss_pred hhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEE------C-CCchhhccCCcceEEEEEeeecCC
Confidence 99999999999884100 00111224677752 1211110 0 111234568999999999986 75
Q ss_pred -CeEEEEe-CCcccCCCce---eee-----cceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCC
Q psy14896 702 -PSYNWTR-RGSPLPRNAY---FEN-----FNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 762 (813)
Q Consensus 702 -p~i~W~k-~g~~l~~~~~---~~~-----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 762 (813)
+.|+|+| ||..|..... ... ..+.|+|..... | |.|+|.|.|..+... +.+.|..||
T Consensus 161 ~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~~~--~~~~~~fp~ 227 (230)
T 1ypz_F 161 VIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNKGG--ADQAIFFPS 227 (230)
T ss_dssp CCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCTTT--SCEEEEECC
T ss_pred CeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCCCc--eeEeeecCC
Confidence 5999999 8887754321 111 135699988876 5 999999999876432 333444555
No 452
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.57 E-value=1.9e-14 Score=140.17 Aligned_cols=173 Identities=13% Similarity=0.165 Sum_probs=106.4
Q ss_pred CCceeecCCCccccccEEEEeeeccCC--CCeEEEeeccc--cccccc---------ccccccCCCccEEee-CC-----
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKEDY--VQDRLV---------ANLIDPLSDKRFTLS-GG----- 256 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g~--~l~~~~---------~~~~~~~~~~~~~~~-~~----- 256 (813)
|..+.+.+| ++|+|.|.+.+.+ .+.|.|||... .+.... ..........|+.+. ++
T Consensus 7 p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 81 (221)
T 3m8o_H 7 SGGGLVQPG-----GSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTA 81 (221)
T ss_dssp ESCEEECTT-----CCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEE
T ss_pred cCCEEEcCC-----CCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEE
Confidence 444566566 7799999998743 67999998542 111000 000111123455543 11
Q ss_pred eEEEcCCccccCCeeEEEEeecCce-eeEeeeeEEeeee----ecccccCCCCceeecCCCeEEEecCCCCCCc--ceEE
Q psy14896 257 NLIINDPRQVEDRGSYHCKASNKFG-SIISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG--VNYY 329 (813)
Q Consensus 257 ~l~i~~~~~~~d~G~Y~C~a~n~~g-~~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~--~~v~ 329 (813)
+|.|.+. +.+|+|.|.|.+.|... ......+.|.|.. .|.+........ .+|+.++|.|.+....|. +.++
T Consensus 82 sL~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~-~~g~~v~L~C~~~~~~P~~~~~v~ 159 (221)
T 3m8o_H 82 FLQMNSL-KSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST-QPDGNVVIACLVQGFFPQEPLSVT 159 (221)
T ss_dssp EEEECSC-CGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC-CCTTEEEEEEEEEEEBSSCSEEEE
T ss_pred EEEECCC-CHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc-ccCCCEEEEEEEEeeECCCCEEEE
Confidence 4888885 89999999999998631 2223445566542 122221112222 678889999997555776 5999
Q ss_pred EeeccccccccCCccEEEccC------ccEEEeeeeecCCeeeEEEEeeecc
Q psy14896 330 WARDYFPNFVEEDKRVFVSYD------GALYFSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 330 W~k~~~~~~~~~~~~~~~~~~------~~L~i~~v~~~D~G~Y~C~a~n~~g 375 (813)
|+++|+++............+ +.|.|..+..+|+|.|+|.|.|..+
T Consensus 160 W~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~ 211 (221)
T 3m8o_H 160 WSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTN 211 (221)
T ss_dssp ESCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTS
T ss_pred EEECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCC
Confidence 999998763211111110122 2588999999999999999999764
No 453
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.56 E-value=6.5e-15 Score=146.16 Aligned_cols=172 Identities=17% Similarity=0.196 Sum_probs=95.6
Q ss_pred CCceeecCCCccccccEEEEeeeccCC--CCeEEEeeccc--ccccccc-------cccccCCCccEEee------CCeE
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKEDY--VQDRLVA-------NLIDPLSDKRFTLS------GGNL 258 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g~--~l~~~~~-------~~~~~~~~~~~~~~------~~~l 258 (813)
|....+.+| ++|+|.|.+.+.| .+.|.|||... .+..... .........|+.+. +.+|
T Consensus 7 p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 81 (257)
T 3bn9_D 7 SGGGLVKPG-----GSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYL 81 (257)
T ss_dssp ECCEEECTT-----CEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEE
T ss_pred cCCEEEcCC-----CcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEE
Confidence 344566566 7799999998876 67899999742 2110000 00011123455543 2368
Q ss_pred EEcCCccccCCeeEEEEeecCce----------e--eEeeeeEEeeee----ecccccCCCCceeecCCCeEEEecCCCC
Q psy14896 259 IINDPRQVEDRGSYHCKASNKFG----------S--IISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTN 322 (813)
Q Consensus 259 ~i~~~~~~~d~G~Y~C~a~n~~g----------~--~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~ 322 (813)
.|.+. +.+|+|.|.|.+.|..| . .....+.|.|.. +|.+.+......+..|..++|.|.+...
T Consensus 82 ~I~~v-~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~ 160 (257)
T 3bn9_D 82 QMSSL-RAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDY 160 (257)
T ss_dssp EEESC-CGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEE
T ss_pred EECCC-ChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeE
Confidence 88885 89999999999998765 1 123445677754 2333322222345678888999997655
Q ss_pred CCcc-eEEEeeccccccccCCccEEEccCc------cEEEeeeeecCCeeeEEEEeeecc
Q psy14896 323 YPGV-NYYWARDYFPNFVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 323 ~p~~-~v~W~k~~~~~~~~~~~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g 375 (813)
.|.+ .|+|+|++.++.......+ ...++ .|.|.++..+| |.|+|.|.|...
T Consensus 161 ~P~pi~v~W~k~g~~~~~~~~~~~-~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~ 218 (257)
T 3bn9_D 161 FPEPVTVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 218 (257)
T ss_dssp BSSCCEEEETTTTCCSSCEECCCE-ECTTSCEEEEEECCCC--------CEEEEEEEGGG
T ss_pred ECCCcEEEEeeCCCcCCcEecCCe-EcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCC
Confidence 5876 9999999986422211111 12333 47788888778 999999999654
No 454
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.56 E-value=1.4e-14 Score=146.01 Aligned_cols=178 Identities=16% Similarity=0.156 Sum_probs=109.8
Q ss_pred CceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeec--ccccccccc-----ccccc-CCCccEEee-----CC
Q psy14896 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE--DYVQDRLVA-----NLIDP-LSDKRFTLS-----GG 256 (813)
Q Consensus 190 P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~--g~~l~~~~~-----~~~~~-~~~~~~~~~-----~~ 256 (813)
+.++..|..+.+.+| ++++|.|.+. .|.+.|.|||. +..+..... ..... ....|+.+. +.
T Consensus 27 ~~v~~~p~~v~v~~G-----~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 100 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKG-----KYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVS 100 (268)
T ss_dssp SSCBCCCSEEEEETT-----CCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSE
T ss_pred ceeEeCCCEEEecCC-----CCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEE
Confidence 456666777888777 7799999997 48889999993 322110000 00000 111455543 44
Q ss_pred eEEEcCCccccCCeeEEEEeecC-ceeeEeeeeEEeeee------ecccccC-CCCceeecCCCeEEEecCCCCCCcc-e
Q psy14896 257 NLIINDPRQVEDRGSYHCKASNK-FGSIISESVQLAFGF------IGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGV-N 327 (813)
Q Consensus 257 ~l~i~~~~~~~d~G~Y~C~a~n~-~g~~~s~~~~l~v~~------~~~~~~~-~~~~~~~~~~~~~l~C~~~~~~p~~-~ 327 (813)
+|.|.+. +.+|+|.|+|.|.|. ........+.|.|.. +|.+.+. .....+..|+.++|.|.+....|.+ .
T Consensus 101 sL~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~ 179 (268)
T 3pl6_D 101 TLKIQRT-ERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 179 (268)
T ss_dssp EEEECSC-CGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEE
T ss_pred EEEECCC-CcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeE
Confidence 6888885 899999999999974 222224445666654 2222222 2223345688899999975445544 9
Q ss_pred EEEeeccccccccCCccEE--------EccCc------cEEEeeeeecC-CeeeEEEEeeeccc
Q psy14896 328 YYWARDYFPNFVEEDKRVF--------VSYDG------ALYFSALEQID-AGNYSCNVQSKVSD 376 (813)
Q Consensus 328 v~W~k~~~~~~~~~~~~~~--------~~~~~------~L~i~~v~~~D-~G~Y~C~a~n~~g~ 376 (813)
++|+|||+++.. ..+.. ...++ .|.|.....+| +|.|+|.|.|....
T Consensus 180 v~W~~~g~~l~~--~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 180 LSWWVNGKEVHS--GVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp EEEEESSSEECT--TEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EEEEECCEECCC--CeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 999999987522 11111 00223 45666666666 99999999997653
No 455
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.56 E-value=7e-15 Score=145.95 Aligned_cols=177 Identities=17% Similarity=0.165 Sum_probs=108.8
Q ss_pred eeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecc--cccccccc----cccccCCCccEEee-----CCeEEE
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED--YVQDRLVA----NLIDPLSDKRFTLS-----GGNLII 260 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g--~~l~~~~~----~~~~~~~~~~~~~~-----~~~l~i 260 (813)
++..|..+.+.+| ++|+|.|.+.+.|.+.|.|||.. ..+..... .........|+.+. +.+|.|
T Consensus 4 v~~~p~~v~v~~G-----~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 78 (245)
T 3nfj_J 4 IHQWPATLVQPVG-----SPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSS 78 (245)
T ss_dssp EEEECSEEEEETT-----CCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEE
T ss_pred eeCCCceEEecCC-----CCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEE
Confidence 4455677777777 77999999999899999999942 21110000 00001112344332 236888
Q ss_pred cCCccccCCeeEEEEeecCc-----eeeEeeeeEEeeee------ecccccCC-CCceeecCCCeEEEecCCCCCCcc-e
Q psy14896 261 NDPRQVEDRGSYHCKASNKF-----GSIISESVQLAFGF------IGEFNLKR-APEIGNQNWGKAMFCDPPTNYPGV-N 327 (813)
Q Consensus 261 ~~~~~~~d~G~Y~C~a~n~~-----g~~~s~~~~l~v~~------~~~~~~~~-~~~~~~~~~~~~l~C~~~~~~p~~-~ 327 (813)
.+. +.+|+|.|+|.|.|.. .......+.|.|.. +|.+.+.. ....+..|+.++|.|.+....|++ .
T Consensus 79 ~~v-~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~ 157 (245)
T 3nfj_J 79 KKL-LLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVE 157 (245)
T ss_dssp SSC-CGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEE
T ss_pred CCC-ChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEE
Confidence 885 8999999999999832 22223445666654 22222221 222344588899999975445554 8
Q ss_pred EEEeeccccccccCCccEEEc--------cCc------cEEEeeeeecC-CeeeEEEEeeeccc
Q psy14896 328 YYWARDYFPNFVEEDKRVFVS--------YDG------ALYFSALEQID-AGNYSCNVQSKVSD 376 (813)
Q Consensus 328 v~W~k~~~~~~~~~~~~~~~~--------~~~------~L~i~~v~~~D-~G~Y~C~a~n~~g~ 376 (813)
++|+|||+++.. ....... .++ .|.|.....+| .|.|+|.|.|....
T Consensus 158 v~W~k~g~~l~~--~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~ 219 (245)
T 3nfj_J 158 LSWWVNGKEVHS--GVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp EEEEETTEEECT--TEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred EEEEECCEECCC--CcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCC
Confidence 999999987532 1111100 223 57777777778 67999999987654
No 456
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.56 E-value=5.1e-15 Score=121.58 Aligned_cols=79 Identities=24% Similarity=0.335 Sum_probs=69.3
Q ss_pred CcCCCCCCeEEEEEEecCCCCCeEEEEeCC--cccCCCceee--ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEE
Q psy14896 681 PEAPKAGDKVRLECVAFGYPVPSYNWTRRG--SPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 756 (813)
Q Consensus 681 ~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g--~~l~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 756 (813)
...+.+|+.+.|.|.+.|.|.|.|+|+|+| ..+....... .....|.|.+++.+|+|.|+|.|.|..|..+.++.|
T Consensus 11 ~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l 90 (93)
T 1wit_A 11 KIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIFEV 90 (93)
T ss_dssp EEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred ceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEEcCCCeEEEEEEE
Confidence 467899999999999999999999999999 8886654332 334789999999999999999999999999999999
Q ss_pred EEE
Q psy14896 757 SIQ 759 (813)
Q Consensus 757 ~V~ 759 (813)
.|+
T Consensus 91 ~V~ 93 (93)
T 1wit_A 91 IVQ 93 (93)
T ss_dssp EEC
T ss_pred EEC
Confidence 884
No 457
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.56 E-value=2.9e-14 Score=138.14 Aligned_cols=172 Identities=15% Similarity=0.219 Sum_probs=104.3
Q ss_pred CCceeecCCCccccccEEEEeeeccCC--CCeEEEeecc--cccccccc------cccccCCCccEEee---C---CeEE
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA------NLIDPLSDKRFTLS---G---GNLI 259 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g--~~l~~~~~------~~~~~~~~~~~~~~---~---~~l~ 259 (813)
|..+.+.+| ++++|.|.+.+.| .+.|.|||+. ..+..... .........|+.+. . .+|.
T Consensus 7 p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 81 (215)
T 1c5d_H 7 SGPGLVQPS-----QTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLK 81 (215)
T ss_dssp ECCCEECTT-----CCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEE
T ss_pred CCCeeecCC-----CcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEE
Confidence 455666666 7799999998865 5789999974 22110000 00011223465543 1 2688
Q ss_pred EcCCccccCCeeEEEEeecCcee--eEeeeeEEeeee----ecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEEee
Q psy14896 260 INDPRQVEDRGSYHCKASNKFGS--IISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWAR 332 (813)
Q Consensus 260 i~~~~~~~d~G~Y~C~a~n~~g~--~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W~k 332 (813)
|.+. +.+|+|.|.|.+.|..+. .....+.|.|.. +|.+.+......+..|+.++|.|.+.+..|.+ .++|++
T Consensus 82 I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 160 (215)
T 1c5d_H 82 MNSL-QTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNS 160 (215)
T ss_dssp ESSC-CGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGG
T ss_pred ECCC-CcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEcc
Confidence 8885 899999999999986432 113345666653 22222222223456788899999976555877 999999
Q ss_pred ccccccccCCccEEEccCccEE----EeeeeecCCeeeEEEEeeeccc
Q psy14896 333 DYFPNFVEEDKRVFVSYDGALY----FSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~L~----i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
++..+......... ..+.+. +.....+| |.|+|.|.|..+.
T Consensus 161 ~g~~~~~~~~~~~~--~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~ 205 (215)
T 1c5d_H 161 GALSSDVHTFPAVL--QSGLYTLTSSVTSSTWPS-QTVTCNVAHPASS 205 (215)
T ss_dssp GTTCCSCCBCCCEE--ETTEEEEEEEEEESSTTT-SCCEEEEEEGGGT
T ss_pred CCccCceEecCccc--CCCCEEEEEEEecccCCC-CeEEEEEEeCCCC
Confidence 98764322222221 124322 22333345 9999999998874
No 458
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.56 E-value=7.3e-15 Score=124.68 Aligned_cols=100 Identities=21% Similarity=0.343 Sum_probs=67.2
Q ss_pred eeEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCcee--eecceEEEECCCCCC
Q psy14896 657 FPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF--ENFNRILTIPNVKVE 734 (813)
Q Consensus 657 ~~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~--~~~~~~L~i~~v~~~ 734 (813)
+.|.+..+|.+.. ......+.+|++++|.|.+.|.|.|.++|+|+|..+....++ .....+|.|.+++.+
T Consensus 3 ~~v~~~~~P~~~~--------~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 74 (108)
T 3kvq_A 3 LTVLERVAPTITG--------NLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKE 74 (108)
T ss_dssp --------CCCBS--------CCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGG
T ss_pred eeECccCCCceec--------CCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcc
Confidence 3455555665433 223467889999999999999999999999999998765433 344678999999999
Q ss_pred CCEEEEEEEEcCCCceEEEEEEEEEcCCcc
Q psy14896 735 DQGEYICRASNDRSALESSVTISIQAEPNF 764 (813)
Q Consensus 735 d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~ 764 (813)
|+|.|+|.|.|..|..+..+.|.|..+|..
T Consensus 75 D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~ 104 (108)
T 3kvq_A 75 DEGLYTCQACSVLGCAKVEAFFIIEGAQEK 104 (108)
T ss_dssp GCEEEEEEEC----CEEEEEEEEEEC----
T ss_pred cCEEEEEEEEeCCCceEEEEEEEEeCCCcc
Confidence 999999999999999999999999988764
No 459
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=1.2e-14 Score=125.37 Aligned_cols=82 Identities=21% Similarity=0.398 Sum_probs=71.4
Q ss_pred CcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCc-eee--ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEE
Q psy14896 681 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA-YFE--NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 757 (813)
Q Consensus 681 ~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~-~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 757 (813)
...+.+|++++|.|.+.|.|.|.|+|+|+|..+.... .+. .....|+|.+++.+|+|.|+|.|.|..|..+..+.|.
T Consensus 33 ~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~ 112 (118)
T 2e7c_A 33 TYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDTSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIR 112 (118)
T ss_dssp CEEEESSSCEEEEEEEEEESCCEEEEEETTEECCCSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEEEE
T ss_pred CEEEECCCEEEEEEEEccCCCCEEEEEECCEECCCCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEEE
Confidence 3678899999999999999999999999999987332 222 2245699999999999999999999999999999999
Q ss_pred EEcCC
Q psy14896 758 IQAEP 762 (813)
Q Consensus 758 V~~~P 762 (813)
|.++|
T Consensus 113 V~~~P 117 (118)
T 2e7c_A 113 VVEKA 117 (118)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 99887
No 460
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.55 E-value=1.6e-14 Score=122.92 Aligned_cols=84 Identities=14% Similarity=0.208 Sum_probs=67.1
Q ss_pred CCCCCcCCCCCCeEEEEEEecCC---CCCeEEEEeCCcc-cC--CCceee----------ecceEEEECCCCCCCCEEEE
Q psy14896 677 PKTFPEAPKAGDKVRLECVAFGY---PVPSYNWTRRGSP-LP--RNAYFE----------NFNRILTIPNVKVEDQGEYI 740 (813)
Q Consensus 677 ~~~~~~~~~~G~~v~l~C~~~g~---P~p~i~W~k~g~~-l~--~~~~~~----------~~~~~L~i~~v~~~d~G~Y~ 740 (813)
..+.++.+.+|++++|.|.+.|. |.|.|+|||++.. +. .+.++. .....|+|.+++.+|+|.|+
T Consensus 12 ~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~ 91 (126)
T 2dav_A 12 EKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYR 91 (126)
T ss_dssp SCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEE
T ss_pred EcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEE
Confidence 34455778999999999999875 8999999997421 11 111111 12478999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEEc
Q psy14896 741 CRASNDRSALESSVTISIQA 760 (813)
Q Consensus 741 C~a~N~~G~~~~~~~l~V~~ 760 (813)
|+|.|..|..+++++|+|+.
T Consensus 92 Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 92 CEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp EEEECSSCEEEECCEEEEEC
T ss_pred EEEEeCCCcEEEEEEEEEEe
Confidence 99999999999999999998
No 461
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.55 E-value=1.2e-14 Score=147.29 Aligned_cols=180 Identities=15% Similarity=0.199 Sum_probs=112.0
Q ss_pred CCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecc--ccccccc-------ccccccCCCccEEee-----
Q psy14896 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED--YVQDRLV-------ANLIDPLSDKRFTLS----- 254 (813)
Q Consensus 189 ~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g--~~l~~~~-------~~~~~~~~~~~~~~~----- 254 (813)
.+.++..|..+.+.+| ++++|.|.+.+.|.+.|.|||++ ..+.... ..........|+.+.
T Consensus 24 ~~~v~~~p~~v~v~~G-----~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~ 98 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSG-----TSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLT 98 (279)
T ss_dssp CCCEEEECSEEEEETT-----SCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSS
T ss_pred cceEEeCCCeEEecCC-----CeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCC
Confidence 3567777888888777 67999999988899999999975 2111000 000111123455543
Q ss_pred CCeEEEcCCccccCCeeEEEEeecCce-----eeEeeeeEEeeee------ecccccC-CCCceeecCCCeEEEecCCCC
Q psy14896 255 GGNLIINDPRQVEDRGSYHCKASNKFG-----SIISESVQLAFGF------IGEFNLK-RAPEIGNQNWGKAMFCDPPTN 322 (813)
Q Consensus 255 ~~~l~i~~~~~~~d~G~Y~C~a~n~~g-----~~~s~~~~l~v~~------~~~~~~~-~~~~~~~~~~~~~l~C~~~~~ 322 (813)
+.+|.|.+. +.+|+|.|+|.|.|..+ ......+.|.|.. +|.+.+. +....+.+|+.++|.|.+...
T Consensus 99 ~~sL~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~ 177 (279)
T 2wbj_D 99 LSTLTVTSA-HPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF 177 (279)
T ss_dssp EEEEEESSC-CGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEE
T ss_pred EEEEEEccC-CccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeE
Confidence 236888885 89999999999998421 1112345566654 2222222 112234468889999997544
Q ss_pred CCc-ceEEEeeccccccccCCccEE------E--ccCcc------EEEeeeeecC-CeeeEEEEeeeccc
Q psy14896 323 YPG-VNYYWARDYFPNFVEEDKRVF------V--SYDGA------LYFSALEQID-AGNYSCNVQSKVSD 376 (813)
Q Consensus 323 ~p~-~~v~W~k~~~~~~~~~~~~~~------~--~~~~~------L~i~~v~~~D-~G~Y~C~a~n~~g~ 376 (813)
.|. ++|+|+|||+++... .... + ..+++ |.|.....+| .|.|+|.|.|....
T Consensus 178 ~P~~~~v~W~k~g~~l~~~--~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~ 245 (279)
T 2wbj_D 178 YPDHVELSWWVNGKEVHSG--VSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 245 (279)
T ss_dssp BSSCEEEEEEETTEECCTT--EEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBC
T ss_pred cCCCcEEEEEECCEECCCC--cccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCC
Confidence 465 899999999875321 1110 0 12333 6666666654 67899999997653
No 462
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.55 E-value=6.3e-15 Score=122.79 Aligned_cols=80 Identities=21% Similarity=0.312 Sum_probs=70.7
Q ss_pred cCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceee-----ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEE
Q psy14896 682 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE-----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 756 (813)
Q Consensus 682 ~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 756 (813)
..+.+|++++|.|.+.|.|.|.|+|+|+|..+..+.++. ....+|.|.+++.+|+|.|+|.|.|..|..+.++.|
T Consensus 15 ~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 94 (99)
T 1g1c_A 15 QTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSHAFL 94 (99)
T ss_dssp EEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEEEEE
Confidence 567899999999999999999999999999987665432 334589999999999999999999999999999999
Q ss_pred EEEcC
Q psy14896 757 SIQAE 761 (813)
Q Consensus 757 ~V~~~ 761 (813)
.|.++
T Consensus 95 ~V~~~ 99 (99)
T 1g1c_A 95 LVQAK 99 (99)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 99753
No 463
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=1.3e-14 Score=125.19 Aligned_cols=98 Identities=27% Similarity=0.346 Sum_probs=80.6
Q ss_pred CCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCC-cee-eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEE
Q psy14896 680 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 757 (813)
Q Consensus 680 ~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~-~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 757 (813)
....+.+|++++|.|.+.|.|.|.|+|+|+|..+... .++ ...+++|.|.+++.+|+|.|+|.|.|..|..+..+.|.
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 95 (118)
T 2eo9_A 16 VNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIE 95 (118)
T ss_dssp CCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECSSCEEEEECCEE
T ss_pred CCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCCCcEEEEEEEE
Confidence 3366889999999999999999999999999988642 222 23456899999999999999999999999999999999
Q ss_pred EEcCCcc--cccCCceeecCCC
Q psy14896 758 IQAEPNF--TIPLTDKHMDNQA 777 (813)
Q Consensus 758 V~~~P~~--~~~~~~~~~~~g~ 777 (813)
|..+|.+ ...+.+..+.+|.
T Consensus 96 V~~~~~p~~~~~~~~~~~~~G~ 117 (118)
T 2eo9_A 96 VQEFGVPVQPPRPTDPNLIPSA 117 (118)
T ss_dssp EECCSCCCCCCCCCCCCCCCCC
T ss_pred EEeCCCCccCCCCCCCccCCCC
Confidence 9988654 3445566666654
No 464
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.54 E-value=1.6e-14 Score=123.93 Aligned_cols=89 Identities=27% Similarity=0.384 Sum_probs=75.2
Q ss_pred CCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCC-ceee--e---cceEEEECCCCCCCCEEEEEEEEcCCCce
Q psy14896 677 PKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFE--N---FNRILTIPNVKVEDQGEYICRASNDRSAL 750 (813)
Q Consensus 677 ~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~-~~~~--~---~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 750 (813)
..+....+.+|++++|.|.+.|.|.|.|+|+|+|..+... .++. . ...+|.|.+++.+|+|.|+|.|.|..|..
T Consensus 20 ~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~ 99 (116)
T 2kkq_A 20 YKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVT 99 (116)
T ss_dssp SCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEEE
T ss_pred eCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCeE
Confidence 3444577899999999999999999999999999988753 3322 1 12389999999999999999999999999
Q ss_pred EEEEEEEEEcCCccc
Q psy14896 751 ESSVTISIQAEPNFT 765 (813)
Q Consensus 751 ~~~~~l~V~~~P~~~ 765 (813)
+..+.|.|..+|...
T Consensus 100 ~~~~~l~V~~~p~~~ 114 (116)
T 2kkq_A 100 TCNTRLDVTARPNQT 114 (116)
T ss_dssp EEEEEEEEECCSCCC
T ss_pred EEEEEEEEeCCCCCC
Confidence 999999999988654
No 465
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.54 E-value=1e-14 Score=115.90 Aligned_cols=75 Identities=20% Similarity=0.411 Sum_probs=63.9
Q ss_pred cCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceee----ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEE
Q psy14896 682 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 757 (813)
Q Consensus 682 ~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 757 (813)
+.+.+|++++|.|.+.| |.|.|+|+|||.+|..+.++. ....+|+|.+++.+|+|.|+|.|.| ++.++.|.
T Consensus 6 v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~a~l~ 80 (84)
T 2lu7_A 6 VRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRIFLVS 80 (84)
T ss_dssp EEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEEEEEE
T ss_pred EEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEEEEEE
Confidence 56789999999999976 999999999999998776542 2346899999999999999999855 57888999
Q ss_pred EEcC
Q psy14896 758 IQAE 761 (813)
Q Consensus 758 V~~~ 761 (813)
|+.|
T Consensus 81 V~eP 84 (84)
T 2lu7_A 81 VEEP 84 (84)
T ss_dssp ECCC
T ss_pred EECC
Confidence 9765
No 466
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.54 E-value=7.6e-15 Score=144.22 Aligned_cols=122 Identities=15% Similarity=0.215 Sum_probs=92.0
Q ss_pred CCCCCeEEEEEEecCC---CCC-eEEEEeCCcccCCCce-----e----eecceEEEECCCCCCCCEEEEEEEEcCCCce
Q psy14896 684 PKAGDKVRLECVAFGY---PVP-SYNWTRRGSPLPRNAY-----F----ENFNRILTIPNVKVEDQGEYICRASNDRSAL 750 (813)
Q Consensus 684 ~~~G~~v~l~C~~~g~---P~p-~i~W~k~g~~l~~~~~-----~----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 750 (813)
+.+|++++|.|.+.|. |.+ .|+|+|++..+..... . ......|.|.+++.+|+|.|+|.|.|..|..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 6799999999999987 876 9999999877653211 0 1123579999999999999999999998864
Q ss_pred E--EEEEE--EEEcCCcccccCCceeecCCCeEEEEEEEccc-CC-ceEEEEECCEecccc
Q psy14896 751 E--SSVTI--SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGV-PD-VTYSWFRNGELGHQM 805 (813)
Q Consensus 751 ~--~~~~l--~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~~v~W~k~g~~l~~~ 805 (813)
. ..+.+ .+..+|.+...+.......|+.++|.|.+.|. |+ +.|.|+|||++|...
T Consensus 109 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 169 (239)
T 1i1c_A 109 PIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENY 169 (239)
T ss_dssp CEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSE
T ss_pred CcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCc
Confidence 3 34433 45577876544443333458899999999984 54 489999999999654
No 467
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.53 E-value=3.5e-14 Score=139.28 Aligned_cols=173 Identities=13% Similarity=0.163 Sum_probs=103.2
Q ss_pred CCceeecCCCccccccEEEEeeeccCC--CCeEEEeecc--cccccccc------cccccCCCccEEee----CC--eEE
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA------NLIDPLSDKRFTLS----GG--NLI 259 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~P--~p~v~W~k~g--~~l~~~~~------~~~~~~~~~~~~~~----~~--~l~ 259 (813)
|....+.+| ++++|.|.+.+.| .+.+.|||.. ..+..... .........|+.+. ++ +|.
T Consensus 7 p~~~~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 81 (232)
T 1dn0_B 7 WGAGLLKPS-----ETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLK 81 (232)
T ss_dssp ECCCEECTT-----SCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEE
T ss_pred CCCEEEeCC-----CcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEE
Confidence 344566565 7799999998765 6799999964 22110000 00111123466543 12 688
Q ss_pred EcCCccccCCeeEEEEee--cCcee---eEeeeeEEeeeee----cccccCCCCceeecC-CCeEEEecCCCCCCcc-eE
Q psy14896 260 INDPRQVEDRGSYHCKAS--NKFGS---IISESVQLAFGFI----GEFNLKRAPEIGNQN-WGKAMFCDPPTNYPGV-NY 328 (813)
Q Consensus 260 i~~~~~~~d~G~Y~C~a~--n~~g~---~~s~~~~l~v~~~----~~~~~~~~~~~~~~~-~~~~l~C~~~~~~p~~-~v 328 (813)
|.+. +.+|+|.|.|.+. +..+. .....+.|.|... |.+........+..| +.++|.|.+....|.+ .+
T Consensus 82 I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v 160 (232)
T 1dn0_B 82 LSSV-TAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITF 160 (232)
T ss_dssp ECSC-CGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEE
T ss_pred ECCC-CcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEE
Confidence 8885 8999999999998 42121 1234456777542 222211112233467 7889999976556876 99
Q ss_pred EEee-cccccccc-------CCccEEEccCccEEEeeeee--cCCeeeEEEEeeeccc
Q psy14896 329 YWAR-DYFPNFVE-------EDKRVFVSYDGALYFSALEQ--IDAGNYSCNVQSKVSD 376 (813)
Q Consensus 329 ~W~k-~~~~~~~~-------~~~~~~~~~~~~L~i~~v~~--~D~G~Y~C~a~n~~g~ 376 (813)
+|++ ||..+... ....+. ..+.|.|..... +|.|.|+|.|.|..+.
T Consensus 161 ~W~~~~g~~l~~~~~~~~~~~~~~~~--~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~ 216 (232)
T 1dn0_B 161 SWKYKNNSDISSTRGFPSVLRGGKYA--ATSQVLLPSKDVMAGTDEHVVCKVQHPNGN 216 (232)
T ss_dssp EEEETTSCEECCEEECCCEEETTEEE--EEEEEEECTTCC---CCCEEEEEEECTTCC
T ss_pred EEEcCCCCceeeEEECCccccCCcEE--EEEEEEEcHHHhcccCCCeEEEEEEeCCCC
Confidence 9999 88764220 001111 123688888876 8899999999998764
No 468
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=1.3e-14 Score=120.44 Aligned_cols=82 Identities=18% Similarity=0.353 Sum_probs=70.1
Q ss_pred CCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceee----ecceEEEECCCCCCCCEEEEEEEEcCCCceEEE
Q psy14896 678 KTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSALESS 753 (813)
Q Consensus 678 ~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 753 (813)
.+....+.+|++++|.|.+ .|.|.|+|+|||.+|..+.++. .....|.|.++..+|+|.|+|.|.|. ..+.+
T Consensus 13 ~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~~~~ 88 (100)
T 2yuz_A 13 PLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY--NVTLP 88 (100)
T ss_dssp CCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS--CCCEE
T ss_pred cCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC--CeeEE
Confidence 3445678999999999999 7999999999999998776542 22358999999999999999999998 67889
Q ss_pred EEEEEEcCCc
Q psy14896 754 VTISIQAEPN 763 (813)
Q Consensus 754 ~~l~V~~~P~ 763 (813)
+.|.|..+|.
T Consensus 89 a~L~V~~~P~ 98 (100)
T 2yuz_A 89 AKVHVISGPS 98 (100)
T ss_dssp EEEEEECCSC
T ss_pred EEEEEeCCCC
Confidence 9999999885
No 469
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.53 E-value=2e-14 Score=118.45 Aligned_cols=78 Identities=19% Similarity=0.277 Sum_probs=70.7
Q ss_pred CCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEE
Q psy14896 680 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI 758 (813)
Q Consensus 680 ~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 758 (813)
....+.+|++++|.|.+.|.| |.|+|+|+|..+..+.++...++.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|
T Consensus 17 ~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 17 ESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRITGEEVEVRDSIPADSGLYACVTSSPSGSDTTYFSVNV 94 (95)
T ss_dssp CCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEECSSEEEESSCCGGGSEEEEEEEEETTEEEEEEEEEEE
T ss_pred ceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEeCCEEEECCCChHHCEEEEEEeccCCCcEEEEEEEEE
Confidence 346789999999999999998 799999999999877776666789999999999999999999999999999999887
No 470
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.53 E-value=2.7e-14 Score=151.02 Aligned_cols=165 Identities=11% Similarity=0.171 Sum_probs=105.7
Q ss_pred cccEEEEeeeccC-CCC---eEEEeecccccccccccccccCCCccEEeeCCeEEEcCCccccCCeeEEEEeecCceee-
Q psy14896 209 LNDITLSCYAGGY-PNP---SYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSI- 283 (813)
Q Consensus 209 g~~v~l~C~~~g~-P~p---~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~- 283 (813)
|++++|.|.+.|. |.| .|+|||++.++............+..+. ...+|.|.. ++.+|+|.|+|.|.|..+..
T Consensus 183 g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~-~~s~L~I~~-~~~~D~g~Y~C~~~~~~~~~~ 260 (376)
T 2aty_A 183 TLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFR-SVSELPIMH-QDWLNGKEFKCRVNSAAFPAP 260 (376)
T ss_pred CCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEE-EEEEEEech-HhccCCCEEEEEEecCCCCCc
Confidence 4779999999987 433 7999999976532211111111222222 133577765 48999999999999886632
Q ss_pred EeeeeEE--eeeeecccccCCCCceeecCCCeEEEecCCCCCC-cceEEEeeccccccccCCccEEEccCcc------EE
Q psy14896 284 ISESVQL--AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP-GVNYYWARDYFPNFVEEDKRVFVSYDGA------LY 354 (813)
Q Consensus 284 ~s~~~~l--~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p-~~~v~W~k~~~~~~~~~~~~~~~~~~~~------L~ 354 (813)
....+.+ .+..+|.+.+...+.....++.++|.|.+.+.+| .++|+|+|||+++......+.....+++ |.
T Consensus 261 ~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~L~ 340 (376)
T 2aty_A 261 IEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSKLN 340 (376)
T ss_pred eEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEEEE
Confidence 2223322 3444555655555555556788999999755455 4799999999875332223333345553 55
Q ss_pred EeeeeecCCeeeEEEEeeecc
Q psy14896 355 FSALEQIDAGNYSCNVQSKVS 375 (813)
Q Consensus 355 i~~v~~~D~G~Y~C~a~n~~g 375 (813)
|.....+|.|.|+|.|.|...
T Consensus 341 i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 341 VQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred EcHHHhCCCCcEEEEEEeCCC
Confidence 666666679999999998654
No 471
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.52 E-value=1.4e-14 Score=121.72 Aligned_cols=81 Identities=16% Similarity=0.250 Sum_probs=71.3
Q ss_pred cCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeee----cceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEE
Q psy14896 682 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN----FNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 757 (813)
Q Consensus 682 ~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 757 (813)
..+.+|++++|.|.+.|.|.|.|+|+|+|..+..+.++.. ...+|.|.+++.+|+|.|+|.|.|..|..+..+.|.
T Consensus 18 ~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~ 97 (103)
T 3qp3_A 18 HRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLD 97 (103)
T ss_dssp EEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred eEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEEEE
Confidence 5678999999999999999999999999999977654422 235799999999999999999999999999999999
Q ss_pred EEcCC
Q psy14896 758 IQAEP 762 (813)
Q Consensus 758 V~~~P 762 (813)
|.+++
T Consensus 98 V~~~~ 102 (103)
T 3qp3_A 98 VTGGD 102 (103)
T ss_dssp EECC-
T ss_pred EECCC
Confidence 98753
No 472
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.52 E-value=3.1e-14 Score=141.75 Aligned_cols=174 Identities=14% Similarity=0.167 Sum_probs=104.3
Q ss_pred CCceeecCCCccccccEEEEeeeccC--CCCeEEEeeccc--cccccc-------ccccccCCCccEEee------CCeE
Q psy14896 196 PTDVVFDLSKRSILNDITLSCYAGGY--PNPSYEWFKEDY--VQDRLV-------ANLIDPLSDKRFTLS------GGNL 258 (813)
Q Consensus 196 p~~~~v~~g~~~~g~~v~l~C~~~g~--P~p~v~W~k~g~--~l~~~~-------~~~~~~~~~~~~~~~------~~~l 258 (813)
|..+.+.+| ++|+|.|.+.+. +.+.+.|||... ...... ..........|+.+. +.+|
T Consensus 7 p~~v~v~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 81 (253)
T 3liz_H 7 SGGGLVQPG-----GSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFL 81 (253)
T ss_dssp ECCCEECTT-----CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEE
T ss_pred CCCEEECCC-----CcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEE
Confidence 345566565 779999999763 467899999642 111000 000111223455543 1238
Q ss_pred EEcCCccccCCeeEEEEeecCc---eeeEeeeeEEeee----eecccccCCCCceeecCCCeEEEecCCCCCCcc-eEEE
Q psy14896 259 IINDPRQVEDRGSYHCKASNKF---GSIISESVQLAFG----FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYW 330 (813)
Q Consensus 259 ~i~~~~~~~d~G~Y~C~a~n~~---g~~~s~~~~l~v~----~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~v~W 330 (813)
.|.+. +.+|+|.|.|.+.|.. .......+.|.|. ..|.+........+..|+.++|.|.+....|.+ .++|
T Consensus 82 ~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W 160 (253)
T 3liz_H 82 QMSSL-KSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW 160 (253)
T ss_dssp EECSC-CGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEE
T ss_pred EECCC-ChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEE
Confidence 88885 8999999999999862 1112344566664 223333223333455688899999976557876 9999
Q ss_pred eeccccccccCCccEEE----ccCccEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 331 ARDYFPNFVEEDKRVFV----SYDGALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 331 ~k~~~~~~~~~~~~~~~----~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
++++..+.......... ...+.|.|.....+| |.|+|.|.|..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~ 209 (253)
T 3liz_H 161 NSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASS 209 (253)
T ss_dssp GGGTBCTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGT
T ss_pred EeCCeecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCC
Confidence 99997532221111111 112468899999999 9999999998764
No 473
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.52 E-value=1.9e-14 Score=120.05 Aligned_cols=82 Identities=21% Similarity=0.351 Sum_probs=70.8
Q ss_pred CcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCcee---e--ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEE
Q psy14896 681 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF---E--NFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 755 (813)
Q Consensus 681 ~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~---~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 755 (813)
...+.+|++++|.|.+.|.|.|.|+|+|+|..+...... . ....+|.|.+++.+|+|.|+|.|.|..|..+.++.
T Consensus 14 ~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 93 (100)
T 2kdg_A 14 NMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQ 93 (100)
T ss_dssp CEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEE
Confidence 366889999999999999999999999999988765421 1 12248999999999999999999999999999999
Q ss_pred EEEEcCC
Q psy14896 756 ISIQAEP 762 (813)
Q Consensus 756 l~V~~~P 762 (813)
|.|..+|
T Consensus 94 l~V~~~e 100 (100)
T 2kdg_A 94 LDVLAKE 100 (100)
T ss_dssp EEEECCC
T ss_pred EEEEecC
Confidence 9998654
No 474
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.52 E-value=4.3e-14 Score=139.32 Aligned_cols=176 Identities=14% Similarity=0.227 Sum_probs=110.9
Q ss_pred CCceeccCCCceEEeCCCCCCC----ccEEEEccCCCC--C-cc-------------------cCCCeEEEeeCc-----
Q psy14896 576 APEIGNQNWGKAMFCDPPTNYP----GVNYYWARDYFP--N-FV-------------------EEDKRVFVSYDG----- 624 (813)
Q Consensus 576 ~~~~~~~g~~~~l~C~~~~~~p----~~~v~W~k~~~~--~-~~-------------------~~~~~~~~~~~~----- 624 (813)
.+..+.+|+.++|.|.+ .+.+ ...+.|||.... . .+ ....|+.+..+.
T Consensus 8 ~~~~v~~G~~v~L~C~~-~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 86 (239)
T 3tv3_H 8 GPTLVEASETLSLTCAV-SGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLV 86 (239)
T ss_dssp SCSEECTTSCEEEEEEE-ESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEE
T ss_pred CCEEEcCCCCEEEEEEE-cCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEE
Confidence 34567889999999998 4444 458999984311 0 00 112456555432
Q ss_pred cEEEEeecccCCeeEEEEEEeeecC----------ccccCceeeEEEccC-CCccccccCCCCCCCCCcCCCCCCeEEEE
Q psy14896 625 ALYFSALEQIDAGNYSCNVQSKVSD----------TGRNGPFFPLKVFPH-SNFQQLKFPNNFPKTFPEAPKAGDKVRLE 693 (813)
Q Consensus 625 ~L~i~~~~~~d~G~Y~C~a~n~~g~----------~~~~~~~~~l~v~~~-p~~~~~~~p~~~~~~~~~~~~~G~~v~l~ 693 (813)
+|.|.+++.+|+|.|.|.+.+..+. .........|.|... +..+.+.. ......+..|+.++|.
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~-----~~~~~~~~~g~~v~l~ 161 (239)
T 3tv3_H 87 FLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFP-----LAPSSKSTSGGTAALG 161 (239)
T ss_dssp EEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEE-----ECCCCCC--TTEEEEE
T ss_pred EEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEE-----ECCChhhccCCcEEEE
Confidence 3999999999999999999886421 001112235666522 11111110 0111345679999999
Q ss_pred EEecC-CCCC-eEEEEeCCcccCCCc--------eeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEE
Q psy14896 694 CVAFG-YPVP-SYNWTRRGSPLPRNA--------YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI 758 (813)
Q Consensus 694 C~~~g-~P~p-~i~W~k~g~~l~~~~--------~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 758 (813)
|.+.| .|++ .++|+++|..+.... ......+.|+|.....+| |.|+|.|.|..+.......|.+
T Consensus 162 C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 235 (239)
T 3tv3_H 162 CLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 235 (239)
T ss_dssp EEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEecc
Confidence 99998 4544 589999997542111 011113579999998899 9999999999887776666654
No 475
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.52 E-value=2.9e-14 Score=123.05 Aligned_cols=96 Identities=21% Similarity=0.299 Sum_probs=75.7
Q ss_pred eEEEccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeee--------cceEEEEC
Q psy14896 658 PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN--------FNRILTIP 729 (813)
Q Consensus 658 ~l~v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~--------~~~~L~i~ 729 (813)
.|.|..+|.+.... .....+...|.|.+.|.|.|.++|+|+|..+..+.+... ..+.|.|.
T Consensus 2 ~L~V~~pP~i~~~~-----------~~~~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~ 70 (118)
T 1wwc_A 2 ALTVYYPPRVVSLE-----------EPELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFN 70 (118)
T ss_dssp --CCCCCCCCCCCC-----------CCCCCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEE
T ss_pred EEEEecCCceeccC-----------CCeeccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEEC
Confidence 46677777654321 112236788999999999999999999999987653321 35689999
Q ss_pred CCCCCCCEEEEEEEEcCCCceEEEEEEEEEcCCcc
Q psy14896 730 NVKVEDQGEYICRASNDRSALESSVTISIQAEPNF 764 (813)
Q Consensus 730 ~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P~~ 764 (813)
+++.+|+|.|+|.|.|..|..++++.|.|..+|..
T Consensus 71 ~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~ 105 (118)
T 1wwc_A 71 KPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFP 105 (118)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEECCSCCCCC
T ss_pred CCChhcCEEEEEEEECCCCeEeeEEEEEEccCCCc
Confidence 99999999999999999999999999999988854
No 476
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.52 E-value=9.9e-14 Score=118.81 Aligned_cols=94 Identities=22% Similarity=0.285 Sum_probs=76.0
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEee----CCeEEEcCC
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS----GGNLIINDP 263 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~----~~~l~i~~~ 263 (813)
.||.|+..|.++.+.+| ++++|.|.+.|.|.|.|.|||+|..+. .+.++.+. .++|.|.+.
T Consensus 6 ~pp~i~~~~~~~~v~~G-----~~v~l~C~~~g~p~p~i~W~k~~~~~~----------~~~~~~~~~~~~~~~L~I~~v 70 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAG-----ESVELFGKVTGTQPITCTWMKFRKQIQ----------ESEHMKVENSENGSKLTILAA 70 (114)
T ss_dssp CCCEESCCCCSEEEETT-----CCEEEEEEEESSSSCEEEEEESSSBCC----------CSSSEEEEECSSEEEEEETTC
T ss_pred CCCEEEeCCCCeEEeCC-----CeEEEEEEEEcCCCCEEEEEECCEECc----------CCCCEEEEEcCCEEEEEECCC
Confidence 46889988999998887 669999999999999999999998763 22344443 346788775
Q ss_pred ccccCCeeEEEEeecCceeeEeeeeEEeeeeeccc
Q psy14896 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF 298 (813)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~ 298 (813)
+.+|+|.|+|.|.|..|.. +..+.|.|...|..
T Consensus 71 -~~~D~G~Y~C~a~N~~g~~-~~~~~l~V~~~p~~ 103 (114)
T 2cqv_A 71 -RQEHCGCYTLLVENKLGSR-QAQVNLTVVDKPDP 103 (114)
T ss_dssp -CTTTCEEEEEEEECSSCEE-ECCEEEEEECSCSC
T ss_pred -ChhcCEEEEEEEEECCCcE-EEEEEEEEECCCCC
Confidence 8999999999999999977 66888888766543
No 477
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=2.9e-14 Score=121.35 Aligned_cols=86 Identities=19% Similarity=0.270 Sum_probs=73.1
Q ss_pred CCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCC-ceeee-----cceEEEECCCCCCCCEEEEEEEEcCCCceEEE
Q psy14896 680 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFEN-----FNRILTIPNVKVEDQGEYICRASNDRSALESS 753 (813)
Q Consensus 680 ~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~-~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 753 (813)
....+.+|++++|.|.+.|.|.|.|+|+|+|..+... .++.. ....|.|.+++.+|+|.|+|.|.|..|..+..
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~ 95 (110)
T 2dm2_A 16 KHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCT 95 (110)
T ss_dssp CCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCCEEEC
T ss_pred cCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCeEEEE
Confidence 3467899999999999999999999999999998753 33221 12379999999999999999999999999999
Q ss_pred EEEEEEcCCccc
Q psy14896 754 VTISIQAEPNFT 765 (813)
Q Consensus 754 ~~l~V~~~P~~~ 765 (813)
+.|.|..+|..+
T Consensus 96 ~~l~V~~~~~~P 107 (110)
T 2dm2_A 96 GRLMVQAVNSGP 107 (110)
T ss_dssp CCEEEECCSCCS
T ss_pred EEEEEECCCCCC
Confidence 999999887543
No 478
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.51 E-value=1.5e-14 Score=131.53 Aligned_cols=88 Identities=23% Similarity=0.374 Sum_probs=72.5
Q ss_pred cCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeee-----cceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEE
Q psy14896 682 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN-----FNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 756 (813)
Q Consensus 682 ~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 756 (813)
..+.+|++++|.|.+.|.|.|.|+|+|+|..+..+.++.. ....|.|.+++.+|+|.|+|.|.|..|..+..+.|
T Consensus 51 ~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 130 (154)
T 1fhg_A 51 MEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAEL 130 (154)
T ss_dssp EEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEEE
Confidence 6789999999999999999999999999999987665432 24589999999999999999999999999999999
Q ss_pred EEEcCCcccccCC
Q psy14896 757 SIQAEPNFTIPLT 769 (813)
Q Consensus 757 ~V~~~P~~~~~~~ 769 (813)
.|..+|.+...+.
T Consensus 131 ~V~~~p~~~~~~~ 143 (154)
T 1fhg_A 131 LVETMGKEGEGEG 143 (154)
T ss_dssp EEECC--------
T ss_pred EEeCcCcCCCCCC
Confidence 9999998765443
No 479
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=1.5e-14 Score=120.74 Aligned_cols=81 Identities=22% Similarity=0.440 Sum_probs=70.9
Q ss_pred cCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCC-cee-eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEE
Q psy14896 682 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 759 (813)
Q Consensus 682 ~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~-~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 759 (813)
..+.+|++++|.|.+.|.|.|.|+|+|+|..+... .++ ...+++|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 18 ~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (100)
T 2edj_A 18 QTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVT 97 (100)
T ss_dssp EEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEECSSCCCBCCEEEEEE
T ss_pred EEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCCCCEEEEEEEEEe
Confidence 56789999999999999999999999999988732 222 2345689999999999999999999999999999999999
Q ss_pred cCC
Q psy14896 760 AEP 762 (813)
Q Consensus 760 ~~P 762 (813)
++|
T Consensus 98 ~~~ 100 (100)
T 2edj_A 98 ESG 100 (100)
T ss_dssp SCC
T ss_pred cCC
Confidence 875
No 480
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.51 E-value=1.1e-15 Score=148.02 Aligned_cols=159 Identities=19% Similarity=0.207 Sum_probs=100.5
Q ss_pred CCCceeccCCCceEEeCCCCCCCc---cEEEEccCCCCCccc--------CCCeEEEeeCccEEEEeecccCCeeEEEEE
Q psy14896 575 RAPEIGNQNWGKAMFCDPPTNYPG---VNYYWARDYFPNFVE--------EDKRVFVSYDGALYFSALEQIDAGNYSCNV 643 (813)
Q Consensus 575 ~~~~~~~~g~~~~l~C~~~~~~p~---~~v~W~k~~~~~~~~--------~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 643 (813)
+....+.+|+.++|.|.+ .+.++ +.|+| ++ .+.... .+.++ ...++|.|.++..+|+|.|+|.|
T Consensus 11 P~~~~v~~G~~v~L~C~~-~g~~p~~~~~v~W-~~-~~~~~~~~~~~~~~~~g~~--~~~~~L~I~~~~~~D~g~Y~C~~ 85 (214)
T 1ow0_A 11 PALEDLLLGSEANLTCTL-TGLRDASGVTFTW-TP-SSGKSAVQGPPERDLCGCY--SVSSVLPGCAEPWNHGKTFTCTA 85 (214)
T ss_dssp CCHHHHHHCSSCCCEEEE-TTCCSCCCCCCCB-SS-CSSCCCEECCCCCCSTTCC--CEEEECTTTHHHHHHTCEEEEEE
T ss_pred cChHHhccCCCcEEEEEE-eeeECCCCeEEEE-cC-CCCCCcccCCceECCCCcE--EEEEEEEEeHHHcCCCCeEEEEE
Confidence 344556789999999999 45543 68999 44 332110 01111 12345888999999999999999
Q ss_pred EeeecCccccCceeeEE---EccCCCccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-CC-CeEEEEeCCcccCCCce
Q psy14896 644 QSKVSDTGRNGPFFPLK---VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PV-PSYNWTRRGSPLPRNAY 718 (813)
Q Consensus 644 ~n~~g~~~~~~~~~~l~---v~~~p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P~-p~i~W~k~g~~l~~~~~ 718 (813)
.|..+.... ...+. +..+|.+... + .....+..|+.++|.|.+.|. |+ +.|+|+|||..|..+..
T Consensus 86 ~~~~~~~~~---~~~i~~~~~~~~P~v~~~--~-----~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~ 155 (214)
T 1ow0_A 86 AYPESKTPL---TATLSKSGNTFRPEVHLL--P-----PPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKY 155 (214)
T ss_dssp CCSSCSSCE---EEEEECCSSCCCCEEEEE--C-----CCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGS
T ss_pred ecCCCCCce---eEeeccCCCCCCCEEEec--C-----CCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCce
Confidence 998754211 12222 2233432211 1 111346789999999999986 53 49999999998865521
Q ss_pred -----eee---cce------EEEECCCCCCCCEEEEEEEEcCCC
Q psy14896 719 -----FEN---FNR------ILTIPNVKVEDQGEYICRASNDRS 748 (813)
Q Consensus 719 -----~~~---~~~------~L~i~~v~~~d~G~Y~C~a~N~~G 748 (813)
... .++ .|.|.....+|.|.|+|.|.|..-
T Consensus 156 ~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 156 LTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp EECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred eecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCC
Confidence 111 233 345544444568999999999753
No 481
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=3.7e-14 Score=117.80 Aligned_cols=81 Identities=19% Similarity=0.276 Sum_probs=72.5
Q ss_pred cCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEcC
Q psy14896 682 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 761 (813)
Q Consensus 682 ~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 761 (813)
..+.+|+.++|.|.+.|.| |.|+|+|+|..+....++......|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+
T Consensus 13 ~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 91 (99)
T 2cr3_A 13 FLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRITGEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDA 91 (99)
T ss_dssp CCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEECSSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEECBCSC
T ss_pred eEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEECCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEEecC
Confidence 5688999999999999987 799999999999777666555789999999999999999999999999999999999876
Q ss_pred Cc
Q psy14896 762 PN 763 (813)
Q Consensus 762 P~ 763 (813)
|.
T Consensus 92 ~~ 93 (99)
T 2cr3_A 92 LP 93 (99)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 482
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.50 E-value=2.3e-14 Score=140.75 Aligned_cols=176 Identities=15% Similarity=0.279 Sum_probs=107.1
Q ss_pred CceeccCCCceEEeCCCCCC----CccEEEEccCCCC---Ccc----------------cCCCeEEEeeCc-----cEEE
Q psy14896 577 PEIGNQNWGKAMFCDPPTNY----PGVNYYWARDYFP---NFV----------------EEDKRVFVSYDG-----ALYF 628 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~~~----p~~~v~W~k~~~~---~~~----------------~~~~~~~~~~~~-----~L~i 628 (813)
+..+.+|+.++|.|.+ .+. +...|.|||.... ..+ ....|+.+..+. +|+|
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 87 (232)
T 3qhz_H 9 PALVKPTQTLTLTCSF-SGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTM 87 (232)
T ss_dssp CSEECTTSCEEEEEEE-ESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEE
T ss_pred CEEECCCCcEEEEEEE-eCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEE
Confidence 3567889999999998 332 2334599984211 000 112466665433 4999
Q ss_pred EeecccCCeeEEEEEEeeecCc-----cccCceeeEEEccC-CCccccccCCCCCCCCCcCCCCCCeEEEEEEecCCCC-
Q psy14896 629 SALEQIDAGNYSCNVQSKVSDT-----GRNGPFFPLKVFPH-SNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV- 701 (813)
Q Consensus 629 ~~~~~~d~G~Y~C~a~n~~g~~-----~~~~~~~~l~v~~~-p~~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~P~- 701 (813)
.+++.+|+|.|.|.+.+..+.. ........|.|... +..+.+.. ......+..|+.++|.|.+.|.++
T Consensus 88 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~-----~~~~~~~~~g~~v~L~C~~~~~~P~ 162 (232)
T 3qhz_H 88 TNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFP-----LAPSSKSTSGGTAALGCLVKDYFPE 162 (232)
T ss_dssp CSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEE-----ECC-------CEEEEEEEEEEEBSS
T ss_pred CcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEE-----ecccccccCCCcEEEEEEEeeEeCC
Confidence 9999999999999998763110 11112245666521 11111110 011134567999999999998554
Q ss_pred -CeEEEEeCCcccCCCc--------eeeecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEE
Q psy14896 702 -PSYNWTRRGSPLPRNA--------YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 759 (813)
Q Consensus 702 -p~i~W~k~g~~l~~~~--------~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 759 (813)
..++|+|+|..+.... ......+.|+|.....+| |.|+|.|.|..+.......|.+.
T Consensus 163 ~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~~ 228 (232)
T 3qhz_H 163 PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 228 (232)
T ss_dssp CCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred CeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCCC
Confidence 3688999997542111 111113579999999999 99999999998887777776553
No 483
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.50 E-value=2.2e-14 Score=121.49 Aligned_cols=81 Identities=23% Similarity=0.465 Sum_probs=70.5
Q ss_pred cCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceeee----cceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEE
Q psy14896 682 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN----FNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 757 (813)
Q Consensus 682 ~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 757 (813)
..+.+|++++|.|.+.|.|.|.|+|+|+|..+..+.++.. ...+|.|.+++.+|+|.|+|.|.|..|..+..+.|.
T Consensus 23 ~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~ 102 (107)
T 3irg_B 23 VRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVT 102 (107)
T ss_dssp EEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEEEE
Confidence 5678999999999999999999999999999876654422 233899999999999999999999999999999999
Q ss_pred EEcCC
Q psy14896 758 IQAEP 762 (813)
Q Consensus 758 V~~~P 762 (813)
|..+|
T Consensus 103 V~~~P 107 (107)
T 3irg_B 103 VLEPP 107 (107)
T ss_dssp EEC--
T ss_pred EEcCC
Confidence 99887
No 484
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.49 E-value=5.3e-14 Score=123.80 Aligned_cols=79 Identities=24% Similarity=0.355 Sum_probs=66.5
Q ss_pred CcCCCCCCeEEEEEEecCCCCCeEEEEeCC----------------------------cccC-CCcee--e--ecceEEE
Q psy14896 681 PEAPKAGDKVRLECVAFGYPVPSYNWTRRG----------------------------SPLP-RNAYF--E--NFNRILT 727 (813)
Q Consensus 681 ~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g----------------------------~~l~-~~~~~--~--~~~~~L~ 727 (813)
...+.+|++++|.|.+.|.|.|.|+|+|+| ..|. ...++ . ...+.|+
T Consensus 27 ~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~L~ 106 (139)
T 1gxe_A 27 TIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFT 106 (139)
T ss_dssp EEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEEEE
T ss_pred CEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEEEE
Confidence 467899999999999999999999999999 4542 22222 1 1235799
Q ss_pred ECCCCCCCCEEEEEEEEcCCCceEEEEEEEEE
Q psy14896 728 IPNVKVEDQGEYICRASNDRSALESSVTISIQ 759 (813)
Q Consensus 728 i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 759 (813)
|.+++.+|+|.|+|+|.|.+|.++.++.|.|.
T Consensus 107 I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 107 VEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp CSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred ECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 99999999999999999999999999999985
No 485
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.49 E-value=9.9e-14 Score=114.88 Aligned_cols=80 Identities=20% Similarity=0.317 Sum_probs=70.2
Q ss_pred CcCCCCCCeEEEEEEecCC-CCCeEEEEeCCcccCCCceeee----cceEEEECCCCCCCCEEEEEEEEcCCCceEEEEE
Q psy14896 681 PEAPKAGDKVRLECVAFGY-PVPSYNWTRRGSPLPRNAYFEN----FNRILTIPNVKVEDQGEYICRASNDRSALESSVT 755 (813)
Q Consensus 681 ~~~~~~G~~v~l~C~~~g~-P~p~i~W~k~g~~l~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 755 (813)
...+.+|++++|.|.+.|. |.|.|+|+|++..+..+.++.. ....|.|.+++.+|+|.|+|.|.|..|..+.++.
T Consensus 10 ~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 89 (97)
T 2bk8_A 10 HAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAE 89 (97)
T ss_dssp CEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEEEE
Confidence 3678999999999999997 9999999999999877665432 2348999999999999999999999999999999
Q ss_pred EEEEc
Q psy14896 756 ISIQA 760 (813)
Q Consensus 756 l~V~~ 760 (813)
|.|.+
T Consensus 90 l~V~~ 94 (97)
T 2bk8_A 90 LFVKG 94 (97)
T ss_dssp EEETT
T ss_pred EEEEe
Confidence 99874
No 486
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.49 E-value=4.4e-15 Score=143.71 Aligned_cols=176 Identities=13% Similarity=0.114 Sum_probs=104.2
Q ss_pred ceeeCCCceeecCCCccccccEEEEeeeccCCC---CeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 191 YFIKQPTDVVFDLSKRSILNDITLSCYAGGYPN---PSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 191 ~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~---p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
.++..|....+.+| ++++|.|.+.|.+. +.|.| ++..+............+.++. ...+|.|.+ ++.+
T Consensus 6 v~~~~P~~~~v~~G-----~~v~L~C~~~g~~p~~~~~v~W--~~~~~~~~~~~~~~~~~~g~~~-~~~~L~I~~-~~~~ 76 (214)
T 1ow0_A 6 LSLHRPALEDLLLG-----SEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYS-VSSVLPGCA-EPWN 76 (214)
T ss_dssp CEEECCCHHHHHHC-----SSCCCEEEETTCCSCCCCCCCB--SSCSSCCCEECCCCCCSTTCCC-EEEECTTTH-HHHH
T ss_pred EEEECcChHHhccC-----CCcEEEEEEeeeECCCCeEEEE--cCCCCCCcccCCceECCCCcEE-EEEEEEEeH-HHcC
Confidence 34455777776666 77999999998754 69999 4444322110000001111221 233566644 4789
Q ss_pred CCeeEEEEeecCceee-EeeeeE-EeeeeecccccCCC-CceeecCCCeEEEecCCCCCCc-ceEEEeeccccccccC--
Q psy14896 268 DRGSYHCKASNKFGSI-ISESVQ-LAFGFIGEFNLKRA-PEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEE-- 341 (813)
Q Consensus 268 d~G~Y~C~a~n~~g~~-~s~~~~-l~v~~~~~~~~~~~-~~~~~~~~~~~l~C~~~~~~p~-~~v~W~k~~~~~~~~~-- 341 (813)
|+|.|+|.|.|..+.. ....+. +.+..+|.+.+... ...+..|+.++|.|.+.+.+|. ++|+|+|||.++....
T Consensus 77 D~g~Y~C~~~~~~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~ 156 (214)
T 1ow0_A 77 HGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYL 156 (214)
T ss_dssp HTCEEEEEECCSSCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSE
T ss_pred CCCeEEEEEecCCCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCcee
Confidence 9999999999977642 122222 12334444443322 2234567778999997554565 6999999998753321
Q ss_pred CccEEEc---cCccEEEee---eee---cCCeeeEEEEeeecc
Q psy14896 342 DKRVFVS---YDGALYFSA---LEQ---IDAGNYSCNVQSKVS 375 (813)
Q Consensus 342 ~~~~~~~---~~~~L~i~~---v~~---~D~G~Y~C~a~n~~g 375 (813)
....... .+|++.+.. +.. +|.|.|+|.|.|...
T Consensus 157 ~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 157 TWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp ECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred ecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCC
Confidence 1123444 566655543 333 458999999998764
No 487
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=6.6e-14 Score=116.49 Aligned_cols=78 Identities=28% Similarity=0.444 Sum_probs=69.2
Q ss_pred cCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCcee-eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEE
Q psy14896 682 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 759 (813)
Q Consensus 682 ~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 759 (813)
..+.+|++++|.|.+.|.|.|.|+|+|+|..+...... ......|.|.+++.+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 21 ~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 99 (99)
T 2yr3_A 21 CAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTVH 99 (99)
T ss_dssp EEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEECSSCEEEEECCEEEC
T ss_pred CEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEeeCCeEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEEC
Confidence 56889999999999999999999999999998765433 3445789999999999999999999999999999998874
No 488
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.49 E-value=1.6e-13 Score=135.36 Aligned_cols=177 Identities=14% Similarity=0.170 Sum_probs=105.4
Q ss_pred eeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeeccc--cccccc---c--cccccCCCccEEee-----CCeEE
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY--VQDRLV---A--NLIDPLSDKRFTLS-----GGNLI 259 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~--~l~~~~---~--~~~~~~~~~~~~~~-----~~~l~ 259 (813)
++..|..+.+.+| ++|+|.|.+.+ +.+.|.|||++. .+.... . .........|+.+. +.+|.
T Consensus 2 v~q~p~~v~v~~G-----~~v~L~C~~~~-~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~ 75 (238)
T 1bec_A 2 VTQSPRNKVAVTG-----GKVTLSCQQTN-NHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLI 75 (238)
T ss_dssp EEEECSEEEEETT-----CCEEEEEEESS-CCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEE
T ss_pred cccCCCeeEEeCC-----CcEEEEEEeCC-CCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEE
Confidence 3445677777777 77999999964 788999999752 111000 0 00011123455442 23688
Q ss_pred EcCCccccCCeeEEEEeecCce----eeEeeeeEEeeee------ecccccC-CCCceeecCCCeEEEecCCCCCCc-ce
Q psy14896 260 INDPRQVEDRGSYHCKASNKFG----SIISESVQLAFGF------IGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPG-VN 327 (813)
Q Consensus 260 i~~~~~~~d~G~Y~C~a~n~~g----~~~s~~~~l~v~~------~~~~~~~-~~~~~~~~~~~~~l~C~~~~~~p~-~~ 327 (813)
|.+. +.+|+|.|+|.+.|..+ ......+.|.|.. +|.+.+. +....+..|+.++|.|.+.+..|. +.
T Consensus 76 I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~ 154 (238)
T 1bec_A 76 LELA-TPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVE 154 (238)
T ss_dssp ESSC-CGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEE
T ss_pred EecC-CcccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcE
Confidence 8885 89999999999998742 1123345566654 2223222 222344578889999997544575 49
Q ss_pred EEEeeccccccccCC--ccEEEccCccEEE------eeeeecC-CeeeEEEEeeecc
Q psy14896 328 YYWARDYFPNFVEED--KRVFVSYDGALYF------SALEQID-AGNYSCNVQSKVS 375 (813)
Q Consensus 328 v~W~k~~~~~~~~~~--~~~~~~~~~~L~i------~~v~~~D-~G~Y~C~a~n~~g 375 (813)
++|+|||.++..... .......++++.+ .....+| .|.|+|.|.|...
T Consensus 155 v~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 211 (238)
T 1bec_A 155 LSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGL 211 (238)
T ss_dssp EEEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCC
T ss_pred EEEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCC
Confidence 999999987432111 0112233554433 3333334 5789999999743
No 489
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.49 E-value=1.5e-13 Score=134.47 Aligned_cols=175 Identities=14% Similarity=0.159 Sum_probs=106.0
Q ss_pred eeCCCceeecCCCccccccEEEEeeeccC--CCCeEEEeecc--ccccccccc---c--cc-cCCCccEEee--C----C
Q psy14896 193 IKQPTDVVFDLSKRSILNDITLSCYAGGY--PNPSYEWFKED--YVQDRLVAN---L--ID-PLSDKRFTLS--G----G 256 (813)
Q Consensus 193 ~~~p~~~~v~~g~~~~g~~v~l~C~~~g~--P~p~v~W~k~g--~~l~~~~~~---~--~~-~~~~~~~~~~--~----~ 256 (813)
+..|..+.+.+| ++++|.|.+.+. +.+.+.|||.. ..+...... . .. .....|+.+. . .
T Consensus 5 ~q~p~~v~~~~G-----~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 79 (230)
T 1ypz_F 5 EQPEISISRPRD-----ETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTS 79 (230)
T ss_dssp ECSCSEEEEETT-----SCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEE
T ss_pred cccCCEEEEeCC-----CcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEE
Confidence 344667777777 679999999874 66799999964 221100000 0 00 0134555543 1 1
Q ss_pred eEEEcCCccccCCeeEEEEeecC---ceeeEeeeeEEeeee---------ecccccCC-CCceeecCCCeEEEecCCCCC
Q psy14896 257 NLIINDPRQVEDRGSYHCKASNK---FGSIISESVQLAFGF---------IGEFNLKR-APEIGNQNWGKAMFCDPPTNY 323 (813)
Q Consensus 257 ~l~i~~~~~~~d~G~Y~C~a~n~---~g~~~s~~~~l~v~~---------~~~~~~~~-~~~~~~~~~~~~l~C~~~~~~ 323 (813)
+|.|.+. +.+|+|.|.|.+.+. ........+.|.|.. +|.+.+.. ....+..|..++|.|.+....
T Consensus 80 ~L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~ 158 (230)
T 1ypz_F 80 ILTIYSL-EEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFF 158 (230)
T ss_dssp EEEECSC-CGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEES
T ss_pred EEEECcC-ChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeec
Confidence 6788875 899999999999984 111223445677752 23222222 122344578899999976555
Q ss_pred Cc-ceEEEee-ccccccccCCccEEEccCc------cEEEeeeeecCCeeeEEEEeeeccc
Q psy14896 324 PG-VNYYWAR-DYFPNFVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSD 376 (813)
Q Consensus 324 p~-~~v~W~k-~~~~~~~~~~~~~~~~~~~------~L~i~~v~~~D~G~Y~C~a~n~~g~ 376 (813)
|. +.|+|++ ||+++.......+. ..++ .|.|..... | |.|+|.|.|..+.
T Consensus 159 P~~~~v~W~~~~g~~l~~~~~~~~~-~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 159 PDVIRVYWKEKDGNTILDSQEGDTL-KTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp SCCCEEEEECTTSSCBCCCEECCCE-EETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred CCCeEEEEEccCCeEccccccceee-cCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 76 6999999 88764211111111 2233 477777665 4 9999999997653
No 490
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.49 E-value=3.4e-13 Score=129.36 Aligned_cols=174 Identities=21% Similarity=0.274 Sum_probs=107.3
Q ss_pred eeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeeccc--ccccccccccccCCCccEEee-C------CeEEEcC
Q psy14896 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY--VQDRLVANLIDPLSDKRFTLS-G------GNLIIND 262 (813)
Q Consensus 192 ~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~--~l~~~~~~~~~~~~~~~~~~~-~------~~l~i~~ 262 (813)
++..|..+.+.+| ++++|.|.+.+.+ +.|.|||... .+..............|+.+. + .+|.|.+
T Consensus 4 v~q~p~~v~v~~G-----~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~ 77 (207)
T 1ypz_E 4 VEQSPSALSLHEG-----TDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRD 77 (207)
T ss_dssp EEESCSEEEEETT-----CCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECS
T ss_pred cEECCCeEEEccC-----CcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECC
Confidence 3445677777777 7799999998754 5899999642 111000000001123344443 1 3688888
Q ss_pred CccccCCeeEEEEeecCce---------e-eEeeeeEEeeeeecccccCCCCceeecCCCeEEEecCCCCCCc-ceEEEe
Q psy14896 263 PRQVEDRGSYHCKASNKFG---------S-IISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWA 331 (813)
Q Consensus 263 ~~~~~d~G~Y~C~a~n~~g---------~-~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~v~W~ 331 (813)
. +.+|+|.|.|.+.+..+ . .....+.|.|..... ....|.......+++|.|.+....|. +.++|+
T Consensus 78 v-~~~D~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~--~~~~P~v~~~~~~~~l~C~~~g~~P~~~~v~W~ 154 (207)
T 1ypz_E 78 A-QLEDSGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQ--PPAKPSVFIMKNGTNVACLVKDFYPKEVTISLR 154 (207)
T ss_dssp C-CGGGCEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCC--CCCCCEEEEEEETTEEEEEEEEESSSCCEEEEE
T ss_pred C-CHHHCEEEEEEEecCCcccccccccceeeecCccEEEEccCCC--CCCCCeEEEeCCCCeEEEEEeeEeCCCeEEEEe
Confidence 5 99999999999998642 1 112345677653211 11122222223357999997666676 899999
Q ss_pred eccccccccCCccEEEccCccEEEeeeee-cCCeeeEEEEeeeccc
Q psy14896 332 RDYFPNFVEEDKRVFVSYDGALYFSALEQ-IDAGNYSCNVQSKVSD 376 (813)
Q Consensus 332 k~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~g~ 376 (813)
++ .++. .....+....+|.+.+..... +|.|.|+|.|.|..+.
T Consensus 155 ~~-~~l~-~~~~~~~~~~~g~y~~~~~~~~~~~~~ytC~v~~~~~~ 198 (207)
T 1ypz_E 155 SS-KKIV-EFDPAIVISPSGKYSAVKLGQYGDSNSVTCSVQHNSET 198 (207)
T ss_dssp CS-SEEE-ECCCEEEECTTSSEEEEECEEESSTTTCEEEEEETTEE
T ss_pred cC-Cccc-CCccceEEcCCCcEEEEEeecccCCCcEEEEEEECCcc
Confidence 99 6542 223334446678777766655 6789999999997653
No 491
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=2.4e-13 Score=117.21 Aligned_cols=98 Identities=27% Similarity=0.405 Sum_probs=78.8
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEE-eeCCeEEEcCCccc
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFT-LSGGNLIINDPRQV 266 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~ 266 (813)
.+|.|+..|.+..+.+| ++++|.|.+.|.|.|.|.|||+|..+. ..+.++. ..+++|.|.+. +.
T Consensus 7 ~pP~i~~~p~~~~v~~G-----~~v~l~C~~~g~p~p~i~W~k~g~~~~---------~~~~~~~~~~~~~L~i~~v-~~ 71 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVD-----GTFVLSCVATGSPVPTILWRKDGVLVS---------TQDSRIKQLENGVLQIRYA-KL 71 (118)
T ss_dssp CSCCCSBCCCCEEEETT-----CEEEEECBCCCSSCCEEEEEESSSBCC---------TTSTTEEEEETTEEEEESC-CG
T ss_pred CCCEEEcCCCCEEEcCC-----CeEEEEEEEEecCCCEEEEEECCEECc---------CCCCeEEEccCCEEEEccC-Cc
Confidence 47889999999988887 669999999999999999999998662 1233333 45788999886 89
Q ss_pred cCCeeEEEEeecCceeeEeeeeEEeeeeecccccC
Q psy14896 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301 (813)
Q Consensus 267 ~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~ 301 (813)
+|+|.|+|.|.|..|.. +..+.|.|...+.+.+.
T Consensus 72 ~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~p~~~ 105 (118)
T 2eo9_A 72 GDTGRYTCIASTPSGEA-TWSAYIEVQEFGVPVQP 105 (118)
T ss_dssp GGCCCEEEEEECSSCEE-EEECCEEEECCSCCCCC
T ss_pred CCCEEEEEEEEcCCCcE-EEEEEEEEEeCCCCccC
Confidence 99999999999999986 66788888766554433
No 492
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=3.1e-14 Score=119.84 Aligned_cols=84 Identities=19% Similarity=0.254 Sum_probs=67.2
Q ss_pred CCCCcCCCCCCeEEEEEEecCC---CCCeEEEEeCCc-ccCC--Cceee----------ecceEEEECCCCCCCCEEEEE
Q psy14896 678 KTFPEAPKAGDKVRLECVAFGY---PVPSYNWTRRGS-PLPR--NAYFE----------NFNRILTIPNVKVEDQGEYIC 741 (813)
Q Consensus 678 ~~~~~~~~~G~~v~l~C~~~g~---P~p~i~W~k~g~-~l~~--~~~~~----------~~~~~L~i~~v~~~d~G~Y~C 741 (813)
.+.++.+.+|++++|.|.+.|. |.|.|+|||++. .+.. +.++. .....|+|.+++.+|+|.|+|
T Consensus 18 ~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 97 (118)
T 2edn_A 18 KPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRL 97 (118)
T ss_dssp CCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEE
T ss_pred CCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEE
Confidence 3444778999999999999875 789999999742 2221 11111 124789999999999999999
Q ss_pred EEEcCCCceEEEEEEEEEcC
Q psy14896 742 RASNDRSALESSVTISIQAE 761 (813)
Q Consensus 742 ~a~N~~G~~~~~~~l~V~~~ 761 (813)
+|+|..|..++.+.|.|+.|
T Consensus 98 evsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 98 EVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp EEECSSCEEEEEECCEEECC
T ss_pred EEEEcCCcEEEEEEEEEEcC
Confidence 99999999999999999875
No 493
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=1.8e-13 Score=113.99 Aligned_cols=93 Identities=28% Similarity=0.463 Sum_probs=75.5
Q ss_pred CCCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEE-eeCCeEEEcCCcc
Q psy14896 187 PRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFT-LSGGNLIINDPRQ 265 (813)
Q Consensus 187 ~~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~ 265 (813)
..+|.|...|.+..+.+| ++++|.|.+.|.|.|.|.|+|+|..+. ..+.++. ..+++|.|.+. +
T Consensus 6 ~~~P~i~~~p~~~~v~~G-----~~~~l~C~~~g~p~p~v~W~~~~~~~~---------~~~~~~~~~~~~~L~i~~v-~ 70 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVD-----GTALLKCKATGDPLPVISWLKEGFTFP---------GRDPRATIQEQGTLQIKNL-R 70 (100)
T ss_dssp CSSCEEEECCCCEEEESS-----SEEEECCEEECSSCCEEEEEESSSEES---------SSCSSCEECTTCCEEEESC-C
T ss_pred CCCCEEEeCcCCEEEcCC-----CcEEEEEEEEEcCCCEEEEEECCEECC---------CCCCCEEEcCCCEEEEccC-C
Confidence 357899999999988877 669999999999999999999998663 1223333 34778999885 8
Q ss_pred ccCCeeEEEEeecCceeeEeeeeEEeeeee
Q psy14896 266 VEDRGSYHCKASNKFGSIISESVQLAFGFI 295 (813)
Q Consensus 266 ~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~ 295 (813)
.+|+|.|+|.|.|..|.. +..+.|.|..+
T Consensus 71 ~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~ 99 (100)
T 2edj_A 71 ISDTGTYTCVATSSSGET-SWSAVLDVTES 99 (100)
T ss_dssp TTTCCEEEEEEECSSCCC-BCCEEEEEESC
T ss_pred cccCEEEEEEEEcCCCCE-EEEEEEEEecC
Confidence 999999999999999987 67788887543
No 494
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.48 E-value=4.5e-14 Score=117.55 Aligned_cols=79 Identities=23% Similarity=0.401 Sum_probs=68.6
Q ss_pred cCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCce-ee----ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEE
Q psy14896 682 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY-FE----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 756 (813)
Q Consensus 682 ~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~-~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 756 (813)
..+.+|++++|.|.+.|.|.|.|+|+|+|..+..+.. +. ....+|.|.+++.+|+|.|+|.|.|..|..+.++.|
T Consensus 15 ~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~~~l 94 (99)
T 1u2h_A 15 QSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARL 94 (99)
T ss_dssp EEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCceeEEEEE
Confidence 5678999999999999999999999999998876532 21 122379999999999999999999999999999999
Q ss_pred EEEc
Q psy14896 757 SIQA 760 (813)
Q Consensus 757 ~V~~ 760 (813)
.|.+
T Consensus 95 ~V~~ 98 (99)
T 1u2h_A 95 EVRG 98 (99)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9975
No 495
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.48 E-value=1.2e-13 Score=135.33 Aligned_cols=176 Identities=16% Similarity=0.253 Sum_probs=112.6
Q ss_pred CceeccCCCceEEeCCCC-CCCccEEEEccCCCCC----c-------------ccCCCeEEEeeCcc-----EEEEeecc
Q psy14896 577 PEIGNQNWGKAMFCDPPT-NYPGVNYYWARDYFPN----F-------------VEEDKRVFVSYDGA-----LYFSALEQ 633 (813)
Q Consensus 577 ~~~~~~g~~~~l~C~~~~-~~p~~~v~W~k~~~~~----~-------------~~~~~~~~~~~~~~-----L~i~~~~~ 633 (813)
...+.+|+.++|.|.+.. ..+...+.|||..... . .....|+.+..++. |+|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (230)
T 3n9g_H 9 AEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRS 88 (230)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCh
Confidence 456788999999999832 1345689999742110 0 01134666654433 99999999
Q ss_pred cCCeeEEEEEEeeec-----CccccCceeeEEEccCCC-ccccccCCCCCCCCCcCCCCCCeEEEEEEecCC-C-CCeEE
Q psy14896 634 IDAGNYSCNVQSKVS-----DTGRNGPFFPLKVFPHSN-FQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-P-VPSYN 705 (813)
Q Consensus 634 ~d~G~Y~C~a~n~~g-----~~~~~~~~~~l~v~~~p~-~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~-P-~p~i~ 705 (813)
+|+|.|.|.+.+..+ ..........|.|...+. ...+.. ......+.+|+.++|.|.+.+. | .+.++
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~-----~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~ 163 (230)
T 3n9g_H 89 EDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFP-----LAPSSKSTSGGTAALGCLVKDYFPEPVTVS 163 (230)
T ss_dssp GGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEE-----ECCCCCCCTTCEEEEEEEEEEEBSSCCEEE
T ss_pred hhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEe-----cCCCccccCCCCEEEEEEEEeEECCCEEEE
Confidence 999999999987531 111111224577753221 111110 0111335689999999999985 4 34799
Q ss_pred EEeCCcccCCCcee----------eecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEEEEc
Q psy14896 706 WTRRGSPLPRNAYF----------ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 760 (813)
Q Consensus 706 W~k~g~~l~~~~~~----------~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 760 (813)
| +|..+..+... ....+.|+|.....+| |.|+|.|.|..+.......|.|..
T Consensus 164 W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~~ 225 (230)
T 3n9g_H 164 W--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPKS 225 (230)
T ss_dssp E--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCCT
T ss_pred E--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCCC
Confidence 9 77666432110 1113479999999999 999999999988877777776653
No 496
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.47 E-value=1.9e-13 Score=114.72 Aligned_cols=94 Identities=14% Similarity=0.201 Sum_probs=74.3
Q ss_pred CCCCCCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEee--C--CeEE
Q psy14896 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--G--GNLI 259 (813)
Q Consensus 184 ~~~~~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~--~--~~l~ 259 (813)
..+..+|.|+..|.+..+.+| +++.|.|.+.|.|.|.|.|+|+|..+.. ..++.+. . .+|.
T Consensus 3 l~~~~~P~~~~~~~~~~v~~G-----~~v~l~C~~~g~p~p~i~W~k~~~~~~~----------~~~~~~~~~~~~~~L~ 67 (103)
T 3qp3_A 3 FTLDHAPRITLRMRSHRVPCG-----QNTRFILNVQSKPTAEVKWYHNGVELQE----------SSKIHYTNTSGVLTLE 67 (103)
T ss_dssp TTTCEEEEEEECCCCEEEETT-----CCEEEEEEEEEESCCEEEEEETTEECCC----------CSSEEEEEETTEEEEE
T ss_pred CCCCCCCEEEeCCcceEEeCC-----CeEEEEEEEEecCCCEEEEEECCEECCC----------CCCEEEEECCCEEEEE
Confidence 345567899999999998887 6699999999999999999999987632 2233332 2 2577
Q ss_pred EcCCccccCCeeEEEEeecCceeeEeeeeEEeeee
Q psy14896 260 INDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294 (813)
Q Consensus 260 i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~ 294 (813)
|.+. +.+|+|.|+|.|.|..|.. +..+.|.|..
T Consensus 68 i~~~-~~~D~G~Y~C~a~N~~G~~-~~~~~l~V~~ 100 (103)
T 3qp3_A 68 ILDC-HTDDSGTYRAVCTNYKGEA-SDYATLDVTG 100 (103)
T ss_dssp ECSC-CGGGCEEEEEEEEETTEEE-EEEEEEEEEC
T ss_pred EcCC-CcccCEEEEEEEEeCCCcE-EEEEEEEEEC
Confidence 7775 8999999999999999987 6677777753
No 497
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.47 E-value=2.3e-13 Score=116.59 Aligned_cols=97 Identities=24% Similarity=0.388 Sum_probs=77.3
Q ss_pred CCCCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEee-C--C--eEEE
Q psy14896 186 IPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS-G--G--NLII 260 (813)
Q Consensus 186 ~~~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~-~--~--~l~i 260 (813)
...+|.|+..|.+..+.+| ++++|.|.+.|.|.|.|.|+|+|..+.. ...++.+. + + +|.|
T Consensus 12 ~~~~p~f~~~p~~~~v~~G-----~~v~L~C~~~g~p~p~v~W~k~~~~~~~---------~~~~~~~~~~~~~~~~L~I 77 (116)
T 2kkq_A 12 HKRAPMFIYKPQSKKVLEG-----DSVKLECQISAIPPPKLFWKRNNEMVQF---------NTDRISLYQDNTGRVTLLI 77 (116)
T ss_dssp CCBCCCBSSCCCCEEEETT-----EEEEEEEEBCCBSCCEEEEEETTEECCC---------CBTTEEEEECTTCEEEEEE
T ss_pred CCCCCeEEeCCCcEEEeCC-----CcEEEEEEEeccCCCEEEEEECCEECcC---------CCCeEEEEeCCCCeEEEEE
Confidence 3457899999999998888 6699999999999999999999986631 22344432 2 2 6888
Q ss_pred cCCccccCCeeEEEEeecCceeeEeeeeEEeeeeeccc
Q psy14896 261 NDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF 298 (813)
Q Consensus 261 ~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~ 298 (813)
.+. +.+|+|.|+|.|.|..|.. +..+.|.|..+|..
T Consensus 78 ~~v-~~~D~G~Y~C~a~N~~G~~-~~~~~l~V~~~p~~ 113 (116)
T 2kkq_A 78 KDV-NKKDAGWYTVSAVNEAGVT-TCNTRLDVTARPNQ 113 (116)
T ss_dssp EEE-CGGGCEEEEEEEEETTEEE-EEEEEEEEECCSCC
T ss_pred CCC-CcccCEEEEEEEEcCCCeE-EEEEEEEEeCCCCC
Confidence 875 8999999999999999987 67888888776654
No 498
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.47 E-value=8.1e-14 Score=113.56 Aligned_cols=78 Identities=21% Similarity=0.312 Sum_probs=64.3
Q ss_pred CCCcCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceee----ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEE
Q psy14896 679 TFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSALESSV 754 (813)
Q Consensus 679 ~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~ 754 (813)
+.+..+.+|++++|.|.+.+ |+|.|+|+|||.+|..+.++. ....+|.|.+++.+|+|.|+|.|.|. ..++
T Consensus 12 ~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~----~~sa 86 (93)
T 1waa_A 12 LYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT----KSAA 86 (93)
T ss_dssp CCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE----EEEE
T ss_pred CcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC----cEEE
Confidence 33467899999999999987 557999999999998766442 22358999999999999999999884 5788
Q ss_pred EEEEEcC
Q psy14896 755 TISIQAE 761 (813)
Q Consensus 755 ~l~V~~~ 761 (813)
.|.|.++
T Consensus 87 ~L~V~~~ 93 (93)
T 1waa_A 87 NLKVKEL 93 (93)
T ss_dssp EEEEECC
T ss_pred EEEEEcC
Confidence 8888754
No 499
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.47 E-value=2.4e-13 Score=111.90 Aligned_cols=87 Identities=16% Similarity=0.251 Sum_probs=72.2
Q ss_pred CCCceeeCCCceeecCCCccccccEEEEeeeccCCCCeEEEeecccccccccccccccCCCccEEeeCCeEEEcCCcccc
Q psy14896 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (813)
Q Consensus 188 ~~P~~~~~p~~~~v~~g~~~~g~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (813)
.||.|...|.+..+.+| +++.|.|.+.|.| |.|.|||+|..+. .+.++.+.+++|.|.+. +.+
T Consensus 8 ~pp~~~~~~~~~~v~~G-----~~v~l~C~~~g~p-p~i~W~k~g~~~~----------~~~~~~~~~~~L~i~~~-~~~ 70 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPG-----DLLQLRCRLRDDV-QSINWLRDGVQLV----------ESNRTRITGEEVEVRDS-IPA 70 (95)
T ss_dssp CSCCBTTBBCCEEECTT-----SCEEEECCEESSC-CEEEEEBTTBCCC----------CCSSEEECSSEEEESSC-CGG
T ss_pred CCCEEEcCcceEEEcCC-----CeEEEEEECCCCC-CceEEEECCEecC----------CCCCEEEeCCEEEECCC-ChH
Confidence 46888888888888777 6699999999988 8999999998652 34466667888999886 899
Q ss_pred CCeeEEEEeecCceeeEeeeeEEee
Q psy14896 268 DRGSYHCKASNKFGSIISESVQLAF 292 (813)
Q Consensus 268 d~G~Y~C~a~n~~g~~~s~~~~l~v 292 (813)
|+|.|+|.|.|..|.. +..+.|.|
T Consensus 71 D~G~Y~C~a~n~~g~~-~~~~~l~V 94 (95)
T 2ckn_A 71 DSGLYACVTSSPSGSD-TTYFSVNV 94 (95)
T ss_dssp GSEEEEEEEEETTEEE-EEEEEEEE
T ss_pred HCEEEEEEeccCCCcE-EEEEEEEE
Confidence 9999999999999986 56666665
No 500
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.47 E-value=9.1e-14 Score=112.36 Aligned_cols=72 Identities=21% Similarity=0.396 Sum_probs=59.7
Q ss_pred cCCCCCCeEEEEEEecCCCCCeEEEEeCCcccCCCceee----ecceEEEECCCCCCCCEEEEEEEEcCCCceEEEEEEE
Q psy14896 682 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 757 (813)
Q Consensus 682 ~~~~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 757 (813)
+.+.+|+++.|.|.+.+ |.|.|+|+|||++|..+.++. +...+|.|.+++.+|+|.|+|.|.|. +.++.|+
T Consensus 16 v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~----~~~~~lt 90 (91)
T 2lvc_A 16 VHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDE----CAYFTVT 90 (91)
T ss_dssp EECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSC----EEEEEEE
T ss_pred EEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcce----EEEEEEE
Confidence 34678999999999976 889999999999998776542 23457999999999999999999764 6777776
Q ss_pred E
Q psy14896 758 I 758 (813)
Q Consensus 758 V 758 (813)
|
T Consensus 91 V 91 (91)
T 2lvc_A 91 I 91 (91)
T ss_dssp C
T ss_pred C
Confidence 5
Done!