Psyllid ID: psy14897

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
VKPFRSTQSCLVFPYSYGTKSGEQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRID
Secondary Structure (PSIPRED)
cccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEccccccEEEEEEcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEccHHHcccEEEccccccEEcEcccccccccccccEEEEccc
Coil and Loop (DISEMBL)
vkpfrstqsclvfpysygtksgeqistgkedrewigridyihsrnfihrdikpdnflmglgkrgnLVYIIDFglaknvpsspsyerhvttqttrigrid
Flexible Loop (DISEMBL)
vkpfrstqsclvfpysygtksgeqistgkedrewIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLaknvpsspsyerhvttqttrigrid
Low Complexity Region (SEG)
VKPFRSTQSCLVFPYSYGTKSGEQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRID
Disordered region (IsUnstruct)
*********CLVFPYSYGTK*********EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN**********************
Disordered Region (DISOPRED)
**PFRSTQSCLVFPYSYGTKSGEQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRID
Disordered Region (DISEMBL)
VKPFRSTQSCLVFPYSYGTKSGEQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP********************
Disordered Region (DISPRO)
VKPFRSTQSCLVFPYSYGTKSGEQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRID
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
VKPFRSTQSCLVFPYSYGTKSGEQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRID
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	99	2.2.26 [Sep-21-2011]
O76324	440	Discs overgrown protein k	yes	N/A	0.676	0.152	0.616	4e-17
Q5BP74	415	Casein kinase I isoform d	N/A	N/A	0.444	0.106	0.840	6e-17
Q6P647	415	Casein kinase I isoform d	yes	N/A	0.444	0.106	0.840	7e-17
Q9JMK2	416	Casein kinase I isoform e	yes	N/A	0.444	0.105	0.840	7e-17
P49674	416	Casein kinase I isoform e	yes	N/A	0.444	0.105	0.840	8e-17
Q5RC72	415	Casein kinase I isoform d	no	N/A	0.444	0.106	0.840	8e-17
Q06486	415	Casein kinase I isoform d	no	N/A	0.444	0.106	0.840	8e-17
Q9DC28	415	Casein kinase I isoform d	no	N/A	0.444	0.106	0.840	8e-17
P48730	415	Casein kinase I isoform d	no	N/A	0.444	0.106	0.840	8e-17
P35508	415	Casein kinase I isoform d	no	N/A	0.444	0.106	0.840	8e-17

>sp|O76324|DCO_DROME Discs overgrown protein kinase OS=Drosophila melanogaster GN=dco PE=1 SV=2

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 50/73 (68%), Gaps = 6/73 (8%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS------PSYER 86
           + I RIDYIHSR+FIHRDIKPDNFLMGLGK+GNLVYIIDFGLAK    +      P  E 
Sbjct: 111 QMISRIDYIHSRDFIHRDIKPDNFLMGLGKKGNLVYIIDFGLAKKFRDARSLKHIPYREN 170

Query: 87  HVTTQTTRIGRID 99
              T T R   I+
Sbjct: 171 KNLTGTARYASIN 183

Involved in circadian rhythms, viability and molecular oscillations of the clock genes period (per) and timeless (tim). Dbt reduces the stability and thus the accumulation of monomeric per proteins, probably through phosphorylation. No evident circadian oscillation is detected in head.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q5BP74|KC1D_XENLA Casein kinase I isoform delta OS=Xenopus laevis GN=csnk1d PE=1 SV=2

 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 37/44 (84%), Positives = 42/44 (95%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Isoform 1 can phosphorylate a large number of proteins. Isoform 2 has no kinase activity. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating per1 and per2, which may lead to their degradation. Participates in wnt signaling.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6P647|KC1D_XENTR Casein kinase I isoform delta OS=Xenopus tropicalis GN=csnk1d PE=2 SV=1

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 37/44 (84%), Positives = 42/44 (95%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating per1 and per2, which may lead to their degradation. Participates in wnt signaling.

Xenopus tropicalis (taxid: 8364)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9JMK2|KC1E_MOUSE Casein kinase I isoform epsilon OS=Mus musculus GN=Csnk1e PE=1 SV=2

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 37/44 (84%), Positives = 42/44 (95%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates DVL1. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating PER1 and PER2. Retains PER1 in the cytoplasm. Inhibits cytokine-induced granuloytic differentiation.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P49674|KC1E_HUMAN Casein kinase I isoform epsilon OS=Homo sapiens GN=CSNK1E PE=1 SV=1

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 37/44 (84%), Positives = 42/44 (95%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates DVL1. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating PER1 and PER2. Retains PER1 in the cytoplasm. Inhibits cytokine-induced granuloytic differentiation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5RC72|KC1D_PONAB Casein kinase I isoform delta OS=Pongo abelii GN=CSNK1D PE=2 SV=1

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 37/44 (84%), Positives = 42/44 (95%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154

Essential serine/threonine-protein kinase that regulates diverse cellular growth and survival processes including Wnt signaling, DNA repair and circadian rhythms. It can phosphorylate a large number of proteins. Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Phosphorylates connexin-43/GJA1, MAP1A, SNAPIN, MAPT/TAU, TOP2A, DCK, HIF1A, EIF6, p53/TP53, DVL2, DVL3, ESR1, AIB1/NCOA3, DNMT1, PKD2, YAP1, PER1 and PER2. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating PER1 and PER2, leading to retain PER1 in the cytoplasm. YAP1 phosphorylation promotes its SCF(beta-TRCP) E3 ubiquitin ligase-mediated ubiquitination and subsequent degradation. DNMT1 phosphorylation reduces its DNA-binding activity. Phosphorylation of ESR1 and AIB1/NCOA3 stimulates their activity and coactivation. Phosphorylation of DVL2 and DVL3 regulates WNT3A signaling pathway that controls neurite outgrowth. EIF6 phosphorylation promotes its nuclear export. Triggers down-regulation of dopamine receptors in the forebrain. Activates DCK in vitro by phosphorylation. TOP2A phosphorylation favors DNA cleavable complex formation. May regulate the formation of the mitotic spindle apparatus in extravillous trophoblast. Modulates connexin-43/GJA1 gap junction assembly by phosphorylation. Probably involved in lymphocyte physiology. Regulates fast synaptic transmission mediated by glutamate.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q06486|KC1D_RAT Casein kinase I isoform delta OS=Rattus norvegicus GN=Csnk1d PE=1 SV=2

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 37/44 (84%), Positives = 42/44 (95%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154

Essential serine/threonine-protein kinase that regulates diverse cellular growth and survival processes including Wnt signaling, DNA repair and circadian rhythms. It can phosphorylate a large number of proteins. Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Phosphorylates connexin-43/GJA1, MAP1A, SNAPIN, MAPT/TAU, TOP2A, DCK, HIF1A, EIF6, p53/TP53, DVL2, DVL3, ESR1, AIB1/NCOA3, DNMT1, PKD2, YAP1, PER1 and PER2. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating PER1 and PER2, leading to retain PER1 in the cytoplasm. YAP1 phosphorylation promotes its SCF(beta-TRCP) E3 ubiquitin ligase-mediated ubiquitination and subsequent degradation. DNMT1 phosphorylation reduces its DNA-binding activity. Phosphorylation of ESR1 and AIB1/NCOA3 stimulates their activity and coactivation. Phosphorylation of DVL2 and DVL3 regulates WNT3A signaling pathway that controls neurite outgrowth. EIF6 phosphorylation promotes its nuclear export. Triggers down-regulation of dopamine receptors in the forebrain. Activates DCK in vitro by phosphorylation. TOP2A phosphorylation favors DNA cleavable complex formation. May regulate the formation of the mitotic spindle apparatus in extravillous trophoblast. Modulates connexin-43/GJA1 gap junction assembly by phosphorylation. Probably involved in lymphocyte physiology. Regulates fast synaptic transmission mediated by glutamate.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q9DC28|KC1D_MOUSE Casein kinase I isoform delta OS=Mus musculus GN=Csnk1d PE=1 SV=2

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 37/44 (84%), Positives = 42/44 (95%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154

Essential serine/threonine-protein kinase that regulates diverse cellular growth and survival processes including Wnt signaling, DNA repair and circadian rhythms. It can phosphorylate a large number of proteins. Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Phosphorylates connexin-43/GJA1, MAP1A, SNAPIN, MAPT/TAU, TOP2A, DCK, HIF1A, EIF6, p53/TP53, DVL2, DVL3, ESR1, AIB1/NCOA3, DNMT1, PKD2, YAP1, PER1 and PER2. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating PER1 and PER2, leading to retain PER1 in the cytoplasm. YAP1 phosphorylation promotes its SCF(beta-TRCP) E3 ubiquitin ligase-mediated ubiquitination and subsequent degradation. DNMT1 phosphorylation reduces its DNA-binding activity. Phosphorylation of ESR1 and AIB1/NCOA3 stimulates their activity and coactivation. Phosphorylation of DVL2 and DVL3 regulates WNT3A signaling pathway that controls neurite outgrowth. EIF6 phosphorylation promotes its nuclear export. Triggers down-regulation of dopamine receptors in the forebrain. Activates DCK in vitro by phosphorylation. TOP2A phosphorylation favors DNA cleavable complex formation. May regulate the formation of the mitotic spindle apparatus in extravillous trophoblast. Modulates connexin-43/GJA1 gap junction assembly by phosphorylation. Probably involved in lymphocyte physiology. Regulates fast synaptic transmission mediated by glutamate.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 6

>sp|P48730|KC1D_HUMAN Casein kinase I isoform delta OS=Homo sapiens GN=CSNK1D PE=1 SV=2

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 37/44 (84%), Positives = 42/44 (95%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154

Essential serine/threonine-protein kinase that regulates diverse cellular growth and survival processes including Wnt signaling, DNA repair and circadian rhythms. It can phosphorylate a large number of proteins. Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Phosphorylates connexin-43/GJA1, MAP1A, SNAPIN, MAPT/TAU, TOP2A, DCK, HIF1A, EIF6, p53/TP53, DVL2, DVL3, ESR1, AIB1/NCOA3, DNMT1, PKD2, YAP1, PER1 and PER2. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating PER1 and PER2, leading to retain PER1 in the cytoplasm. YAP1 phosphorylation promotes its SCF(beta-TRCP) E3 ubiquitin ligase-mediated ubiquitination and subsequent degradation. DNMT1 phosphorylation reduces its DNA-binding activity. Phosphorylation of ESR1 and AIB1/NCOA3 stimulates their activity and coactivation. Phosphorylation of DVL2 and DVL3 regulates WNT3A signaling pathway that controls neurite outgrowth. EIF6 phosphorylation promotes its nuclear export. Triggers down-regulation of dopamine receptors in the forebrain. Activates DCK in vitro by phosphorylation. TOP2A phosphorylation favors DNA cleavable complex formation. May regulate the formation of the mitotic spindle apparatus in extravillous trophoblast. Modulates connexin-43/GJA1 gap junction assembly by phosphorylation. Probably involved in lymphocyte physiology. Regulates fast synaptic transmission mediated by glutamate.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 6

>sp|P35508|KC1D_BOVIN Casein kinase I isoform delta OS=Bos taurus GN=CSNK1D PE=2 SV=2

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 37/44 (84%), Positives = 42/44 (95%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154

Essential serine/threonine-protein kinase that regulates diverse cellular growth and survival processes including Wnt signaling, DNA repair and circadian rhythms. It can phosphorylate a large number of proteins. Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Phosphorylates connexin-43/GJA1, MAP1A, SNAPIN, MAPT/TAU, TOP2A, DCK, HIF1A, EIF6, p53/TP53, DVL2, DVL3, ESR1, AIB1/NCOA3, DNMT1, PKD2, YAP1, PER1 and PER2. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating PER1 and PER2, leading to retain PER1 in the cytoplasm. YAP1 phosphorylation promotes its SCF(beta-TRCP) E3 ubiquitin ligase-mediated ubiquitination and subsequent degradation. DNMT1 phosphorylation reduces its DNA-binding activity. Phosphorylation of ESR1 and AIB1/NCOA3 stimulates their activity and coactivation. Phosphorylation of DVL2 and DVL3 regulates WNT3A signaling pathway that controls neurite outgrowth. EIF6 phosphorylation promotes its nuclear export. Triggers down-regulation of dopamine receptors in the forebrain. Activates DCK in vitro by phosphorylation. TOP2A phosphorylation favors DNA cleavable complex formation. May regulate the formation of the mitotic spindle apparatus in extravillous trophoblast. Modulates connexin-43/GJA1 gap junction assembly by phosphorylation. Probably involved in lymphocyte physiology. Regulates fast synaptic transmission mediated by glutamate.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
307172667	987	Casein kinase I isoform epsilon [Campono	0.444	0.044	0.886	3e-16
440903043	466	Casein kinase I isoform epsilon [Bos gru	0.676	0.143	0.589	4e-16
383866089	897	PREDICTED: uncharacterized protein LOC10	0.444	0.049	0.886	4e-16
118151288	466	casein kinase I isoform epsilon [Bos tau	0.676	0.143	0.589	4e-16
157780891	416	casein kinase I epsilon [Ovis aries]	0.676	0.161	0.589	5e-16
328777991	900	PREDICTED: hypothetical protein LOC41210	0.444	0.048	0.886	5e-16
417401163	450	Putative casein kinase serine/threonine/	0.676	0.148	0.589	6e-16
432111955	807	Casein kinase I isoform epsilon [Myotis	0.676	0.083	0.589	6e-16
444727703	1003	Casein kinase I isoform delta [Tupaia ch	0.676	0.066	0.589	6e-16
380019715	837	PREDICTED: uncharacterized protein LOC10	0.444	0.052	0.886	7e-16

>gi|307172667|gb|EFN64010.1| Casein kinase I isoform epsilon [Camponotus floridanus]

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/44 (88%), Positives = 41/44 (93%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + I R DYIHSRNFIHRDIKPDNFLMGLGK+GNLVYIIDFGLAK
Sbjct: 111 QLISRTDYIHSRNFIHRDIKPDNFLMGLGKKGNLVYIIDFGLAK 154

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|440903043|gb|ELR53756.1| Casein kinase I isoform epsilon [Bos grunniens mutus]

 Score = 89.0 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 6/73 (8%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS------PSYER 86
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    +      P  E 
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 170

Query: 87  HVTTQTTRIGRID 99
              T T R   I+
Sbjct: 171 KNLTGTARYASIN 183

Source: Bos grunniens mutus

Species: Bos grunniens

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|383866089|ref|XP_003708504.1| PREDICTED: uncharacterized protein LOC100877380 [Megachile rotundata]

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/44 (88%), Positives = 41/44 (93%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + I R DYIHSRNFIHRDIKPDNFLMGLGK+GNLVYIIDFGLAK
Sbjct: 111 QLISRTDYIHSRNFIHRDIKPDNFLMGLGKKGNLVYIIDFGLAK 154

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118151288|ref|NP_001071577.1| casein kinase I isoform epsilon [Bos taurus] gi|111307192|gb|AAI20356.1| Casein kinase 1, epsilon [Bos taurus]

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 6/73 (8%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS------PSYER 86
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    +      P  E 
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 170

Query: 87  HVTTQTTRIGRID 99
              T T R   I+
Sbjct: 171 KNLTGTARYASIN 183

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|157780891|gb|ABV71923.1| casein kinase I epsilon [Ovis aries]

 Score = 88.6 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 6/73 (8%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS------PSYER 86
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    +      P  E 
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 170

Query: 87  HVTTQTTRIGRID 99
              T T R   I+
Sbjct: 171 KNLTGTARYASIN 183

Source: Ovis aries

Species: Ovis aries

Genus: Ovis

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328777991|ref|XP_395574.4| PREDICTED: hypothetical protein LOC412108 [Apis mellifera]

 Score = 88.2 bits (217), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 39/44 (88%), Positives = 41/44 (93%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + I R DYIHSRNFIHRDIKPDNFLMGLGK+GNLVYIIDFGLAK
Sbjct: 111 QLISRTDYIHSRNFIHRDIKPDNFLMGLGKKGNLVYIIDFGLAK 154

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|417401163|gb|JAA47474.1| Putative casein kinase serine/threonine/tyrosine protein kinase [Desmodus rotundus]

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 6/73 (8%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS------PSYER 86
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    +      P  E 
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 170

Query: 87  HVTTQTTRIGRID 99
              T T R   I+
Sbjct: 171 KNLTGTARYASIN 183

Source: Desmodus rotundus

Species: Desmodus rotundus

Genus: Desmodus

Family: Phyllostomidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432111955|gb|ELK34990.1| Casein kinase I isoform epsilon [Myotis davidii]

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 6/73 (8%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS------PSYER 86
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    +      P  E 
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 170

Query: 87  HVTTQTTRIGRID 99
              T T R   I+
Sbjct: 171 KNLTGTARYASIN 183

Source: Myotis davidii

Species: Myotis davidii

Genus: Myotis

Family: Vespertilionidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|444727703|gb|ELW68181.1| Casein kinase I isoform delta [Tupaia chinensis]

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 6/73 (8%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS------PSYER 86
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    +      P  E 
Sbjct: 363 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 422

Query: 87  HVTTQTTRIGRID 99
              T T R   I+
Sbjct: 423 KNLTGTARYASIN 435

Source: Tupaia chinensis

Species: Tupaia chinensis

Genus: Tupaia

Family: Tupaiidae

Order: Scandentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|380019715|ref|XP_003693748.1| PREDICTED: uncharacterized protein LOC100865911, partial [Apis florea]

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 39/44 (88%), Positives = 41/44 (93%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + I R DYIHSRNFIHRDIKPDNFLMGLGK+GNLVYIIDFGLAK
Sbjct: 111 QLISRTDYIHSRNFIHRDIKPDNFLMGLGKKGNLVYIIDFGLAK 154

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
UNIPROTKB|E1BGK5	188	CSNK1D "Casein kinase I isofor	0.555	0.292	0.678	4.1e-17
UNIPROTKB|B0QY35	311	CSNK1E "Casein kinase I isofor	0.555	0.176	0.678	4.1e-17
UNIPROTKB|B0QY36	225	CSNK1E "Casein kinase I isofor	0.555	0.244	0.678	4.1e-17
UNIPROTKB|H0Y2N6	120	CSNK1D "Casein kinase I isofor	0.555	0.458	0.678	4.1e-17
UNIPROTKB|H0Y645	270	CSNK1E "Casein kinase I isofor	0.555	0.203	0.678	4.1e-17
UNIPROTKB|J3QQI9	187	CSNK1D "Casein kinase I isofor	0.555	0.294	0.678	4.1e-17
UNIPROTKB|I3LP46	296	CSNK1E "Uncharacterized protei	0.555	0.185	0.678	4.1e-17
UNIPROTKB|B0QY34	336	CSNK1E "Casein kinase I isofor	0.555	0.163	0.678	6.3e-17
UNIPROTKB|I3LQW7	345	CSNK1D "Uncharacterized protei	0.555	0.159	0.678	7.4e-17
UNIPROTKB|I3LVF4	354	CSNK1D "Uncharacterized protei	0.555	0.155	0.678	8.5e-17

UNIPROTKB|E1BGK5 CSNK1D "Casein kinase I isoform delta" [Bos taurus (taxid:9913)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 38/56 (67%), Positives = 48/56 (85%)

Query:    33 EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
             + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    + +++ H+
Sbjct:   111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ-HI 165

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0034613 "cellular protein localization" evidence=IEA

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|B0QY35 CSNK1E "Casein kinase I isoform epsilon" [Homo sapiens (taxid:9606)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 38/56 (67%), Positives = 48/56 (85%)

Query:    33 EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
             + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    + +++ H+
Sbjct:   111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ-HI 165

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|B0QY36 CSNK1E "Casein kinase I isoform epsilon" [Homo sapiens (taxid:9606)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 38/56 (67%), Positives = 48/56 (85%)

Query:    33 EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
             + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    + +++ H+
Sbjct:   111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ-HI 165

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0034613 "cellular protein localization" evidence=IEA

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA

UNIPROTKB|H0Y2N6 CSNK1D "Casein kinase I isoform delta" [Homo sapiens (taxid:9606)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 38/56 (67%), Positives = 48/56 (85%)

Query:    33 EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
             + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    + +++ H+
Sbjct:    29 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ-HI 83

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|H0Y645 CSNK1E "Casein kinase I isoform epsilon" [Homo sapiens (taxid:9606)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 38/56 (67%), Positives = 48/56 (85%)

Query:    33 EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
             + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    + +++ H+
Sbjct:    49 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ-HI 103

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|J3QQI9 CSNK1D "Casein kinase I isoform delta" [Homo sapiens (taxid:9606)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 38/56 (67%), Positives = 48/56 (85%)

Query:    33 EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
             + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    + +++ H+
Sbjct:    74 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ-HI 128

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|I3LP46 CSNK1E "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 38/56 (67%), Positives = 48/56 (85%)

Query:    33 EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
             + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    + +++ H+
Sbjct:   111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ-HI 165

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|B0QY34 CSNK1E "Casein kinase I isoform epsilon" [Homo sapiens (taxid:9606)]

 Score = 210 (79.0 bits), Expect = 6.3e-17, P = 6.3e-17
 Identities = 38/56 (67%), Positives = 48/56 (85%)

Query:    33 EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
             + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    + +++ H+
Sbjct:   111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ-HI 165

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|I3LQW7 CSNK1D "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 210 (79.0 bits), Expect = 7.4e-17, P = 7.4e-17
 Identities = 38/56 (67%), Positives = 48/56 (85%)

Query:    33 EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
             + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    + +++ H+
Sbjct:    49 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ-HI 103

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|I3LVF4 CSNK1D "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 210 (79.0 bits), Expect = 8.5e-17, P = 8.5e-17
 Identities = 38/56 (67%), Positives = 48/56 (85%)

Query:    33 EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
             + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    + +++ H+
Sbjct:    49 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ-HI 103

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0051225 "spindle assembly" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0042752 "regulation of circadian rhythm" evidence=IEA

GO:0032922 "circadian regulation of gene expression" evidence=IEA

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005876 "spindle microtubule" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0001934 "positive regulation of protein phosphorylation" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q556Y4	KC1_DICDI	2, ., 7, ., 1, 1, ., 1	0.6071	0.5555	0.1291	yes	N/A
P49674	KC1E_HUMAN	2, ., 7, ., 1, 1, ., 1	0.8409	0.4444	0.1057	yes	N/A
Q6P647	KC1D_XENTR	2, ., 7, ., 1, 1, ., 1	0.8409	0.4444	0.1060	yes	N/A
P29295	HRR25_YEAST	2, ., 7, ., 1, 1, ., 1	0.75	0.4040	0.0809	yes	N/A
P40235	HHP1_SCHPO	2, ., 7, ., 1, 1, ., 1	0.75	0.4444	0.1205	yes	N/A
O76324	DCO_DROME	2, ., 7, ., 1, 1, ., 1	0.6164	0.6767	0.1522	yes	N/A
Q8IHZ9	KC1_PLAF7	2, ., 7, ., 1, 1, ., 1	0.6153	0.5252	0.1609	yes	N/A
Q20471	KIN20_CAEEL	2, ., 7, ., 1, 1, ., 1	0.7727	0.4444	0.0885	yes	N/A
Q9JMK2	KC1E_MOUSE	2, ., 7, ., 1, 1, ., 1	0.8409	0.4444	0.1057	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	99
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	6e-14
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-13
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-12
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	4e-12
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-11
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-10
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-10
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-10
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	5e-10
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-09
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	2e-09
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-09
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-09
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-09
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-09
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	7e-09
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	9e-09
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	1e-08
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	1e-08
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-08
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-08
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	4e-08
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	4e-08
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	5e-08
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	5e-08
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	5e-08
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	6e-08
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-07
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	1e-07
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-07
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-07
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-07
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	3e-07
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-07
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	4e-07
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	4e-07
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	5e-07
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	9e-07
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	9e-07
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	2e-06
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-06
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	3e-06
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-06
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	4e-06
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	4e-06
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	4e-06
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	4e-06
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	5e-06
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	5e-06
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	6e-06
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	6e-06
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	7e-06
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	8e-06
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	8e-06
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	8e-06
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	8e-06
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	8e-06
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-05
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	1e-05
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	1e-05
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-05
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	1e-05
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-05
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-05
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-05
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	1e-05
PRK09605	535	PRK09605, PRK09605, bifunctional UGMP family prote	1e-05
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	1e-05
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	1e-05
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	1e-05
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	2e-05
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-05
TIGR03724	199	TIGR03724, arch_bud32, Kae1-associated kinase Bud3	2e-05
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-05
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-05
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-05
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	2e-05
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-05
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-05
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	3e-05
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	3e-05
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	3e-05
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	3e-05
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	3e-05
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	3e-05
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-05
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	3e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	4e-05
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	4e-05
PRK14879	211	PRK14879, PRK14879, serine/threonine protein kinas	4e-05
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	4e-05
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	5e-05
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	5e-05
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	5e-05
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	5e-05
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	7e-05
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	7e-05
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	7e-05
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	8e-05
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	9e-05
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	9e-05
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	1e-04
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-04
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	1e-04
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	1e-04
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	1e-04
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-04
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	1e-04
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-04
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	2e-04
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	2e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-04
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-04
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	2e-04
pfam01636	238	pfam01636, APH, Phosphotransferase enzyme family	2e-04
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	2e-04
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-04
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-04
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	3e-04
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-04
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	3e-04
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	3e-04
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	3e-04
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	3e-04
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	3e-04
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	3e-04
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-04
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	4e-04
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	4e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	4e-04
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	4e-04
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	4e-04
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	5e-04
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	5e-04
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	5e-04
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	5e-04
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	5e-04
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	5e-04
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	5e-04
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	5e-04
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	5e-04
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	5e-04
PHA02882	294	PHA02882, PHA02882, putative serine/threonine kina	6e-04
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	6e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	6e-04
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	6e-04
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	6e-04
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	6e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	6e-04
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	7e-04
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	7e-04
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	7e-04
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	8e-04
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	8e-04
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	8e-04
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	9e-04
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	9e-04
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	0.001
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	0.001
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	0.001
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	0.001
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	0.001
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	0.001
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	0.001
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	0.001
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	0.002
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	0.002
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	0.002
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	0.002
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	0.002
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	0.002
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	0.002
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	0.002
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	0.002
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	0.002
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	0.002
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	0.002
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	0.002
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	0.003
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	0.003
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	0.003
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	0.003
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	0.003
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	0.003
COG3642	204	COG3642, COG3642, Mn2+-dependent serine/threonine	0.003
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	0.003
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	0.003
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	0.004
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	0.004
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	0.004
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	0.004
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	0.004
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	0.004
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 63.8 bits (156), Expect = 6e-14
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++Y+HS   IHRD+KP+N L  L      V + DFGL+K + S  S  +
Sbjct: 105 LEYLHSNGIIHRDLKPENIL--LDSDNGKVKLADFGLSKLLTSDKSLLK 151

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 62.2 bits (152), Expect = 4e-13
 Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 3/47 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           ++Y+HS+  +HRD+KP+N L  L + G+ V + DFGLA+ +      
Sbjct: 110 LEYLHSKGIVHRDLKPENIL--LDEDGH-VKLADFGLARQLDPGEKL 153

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 61.1 bits (149), Expect = 1e-12
 Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 5/54 (9%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK--NVPSSPSYERHVT 89
           ++Y+HS   IHRD+KP+N L  L + G  V I DFGLAK     SS       T
Sbjct: 111 LEYLHSNGIIHRDLKPENIL--LDENGV-VKIADFGLAKKLLKSSSSLTTFVGT 161

Length = 260

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 59.5 bits (145), Expect = 4e-12
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           + +IH   F HRD+KP+N L+       +V I DFGLA+ + S P Y  +V+T
Sbjct: 112 LAHIHKHGFFHRDLKPENLLV---SGPEVVKIADFGLAREIRSRPPYTDYVST 161

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 57.1 bits (139), Expect = 3e-11
 Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           ++Y+HS   I+RD+KP+N L  L   G++  + DFGLAK
Sbjct: 106 LEYLHSLGIIYRDLKPENIL--LDADGHIK-LTDFGLAK 141

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 55.5 bits (132), Expect = 1e-10
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 35  IGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           +  ++Y+HS+  IHRDIKP+N L  L + G +V +IDFGLAK +P   S        +T 
Sbjct: 111 LSALEYLHSKGIIHRDIKPENIL--LDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTS 168

Query: 95  IGRID 99
           +G   
Sbjct: 169 VGTPG 173

Length = 384

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 54.5 bits (132), Expect = 3e-10
 Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           ++Y+HS+  IHRD+KP+N L  L K  ++  I DFG AK +  + S
Sbjct: 115 LEYLHSKGIIHRDLKPENIL--LDKDMHIK-ITDFGTAKVLDPNSS 157

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 53.7 bits (130), Expect = 5e-10
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           + Y+HS   +HRDIK  N L+        V + DFG AK +   
Sbjct: 114 LAYLHSNGIVHRDIKGANILVDSDGV---VKLADFGCAKRLGDI 154

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 53.8 bits (130), Expect = 5e-10
 Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           +D +H   FIHRDIKPDN L  +   G+ + + DFGL K +  +
Sbjct: 114 LDSVHKLGFIHRDIKPDNIL--IDADGH-IKLADFGLCKKMNKA 154

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y HS   +HRD+KP N L+    R  ++ + DFGLA+
Sbjct: 111 LAYCHSHRILHRDLKPQNILIN---RDGVLKLADFGLAR 146

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 52.3 bits (126), Expect = 2e-09
 Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 3/42 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
           ++Y+HS+  IHRDIKPDN L  L ++G+ V+I DF +A  V 
Sbjct: 113 LEYLHSKGIIHRDIKPDNIL--LDEQGH-VHITDFNIATKVT 151

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 52.1 bits (126), Expect = 2e-09
 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 11/60 (18%)

Query: 38  IDYIHSRNFIHRDIKPDN-FLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIG 96
           + Y+HSR  +HRDIKP N FL        LV + DFG++K           V    T +G
Sbjct: 116 LKYLHSRKILHRDIKPQNIFLT----SNGLVKLGDFGISK------VLSSTVDLAKTVVG 165

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 3/46 (6%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           +Y+ S+NFIHRD+   N L+G      +V I DFGL++++     Y
Sbjct: 117 EYLESKNFIHRDLAARNCLVG---ENLVVKISDFGLSRDLYDDDYY 159

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 3/46 (6%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           +Y+ S+NFIHRD+   N L+G      +V I DFGL++++     Y
Sbjct: 116 EYLESKNFIHRDLAARNCLVG---ENLVVKISDFGLSRDLYDDDYY 158

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK--NVPSSPSYERHVTT 90
           + Y+HS   +HRDIK  N L  +   G L  + DFGLA+     +S  Y   V T
Sbjct: 113 LQYLHSNGILHRDIKGSNIL--INNDGVL-KLADFGLARPYTKRNSADYTNRVIT 164

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 50.7 bits (122), Expect = 7e-09
 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 6/54 (11%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ 91
           ++Y+HS   +HRD+KP+N L+     G L  + DFGLA++  S     R +T Q
Sbjct: 115 LEYLHSNWILHRDLKPNNLLI--ASDGVL-KLADFGLARSFGSPN---RKMTHQ 162

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 50.3 bits (121), Expect = 9e-09
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 5/47 (10%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGL-GKRGNLVYIIDFGLAKNVPSSPS 83
           ++Y+HS   IHRDIK  N L+   G+    V +IDFGL+  +  + +
Sbjct: 111 LEYLHSNGIIHRDIKAANILLTSDGE----VKLIDFGLSAQLSDTKA 153

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 50.1 bits (120), Expect = 1e-08
 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 5/54 (9%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS--PSYERHVT 89
           ID IH   +IHRDIKPDN L  L  +G+ + + DFGL   +  S    + R ++
Sbjct: 114 IDSIHKLGYIHRDIKPDNLL--LDAKGH-IKLSDFGLCTGLKKSHRTEFYRILS 164

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 50.2 bits (120), Expect = 1e-08
 Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           I+Y+HS+  +HRD+KPDN L+GL      V I+D+G A 
Sbjct: 126 IEYVHSKGVLHRDLKPDNILLGLFGE---VVILDWGAAI 161

Length = 932

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 3/38 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           ++Y+HS+N IHRDIK DN L  L K G+ V + DFG A
Sbjct: 129 LEYLHSQNVIHRDIKSDNIL--LSKDGS-VKLADFGFA 163

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH-VTTQTTR 94
           + + HS   +HRD+KP+N L+       ++ + DFGLA++  S      H V T+  R
Sbjct: 111 LAFCHSHGILHRDLKPENLLI---NTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYR 165

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 48.5 bits (116), Expect = 4e-08
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 4/58 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS-PSYERHVTTQTTR 94
           I++ HS N IHRDIKP+N L+    +  +V + DFG A+ + +    Y  +V T+  R
Sbjct: 113 IEFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYR 167

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 48.4 bits (116), Expect = 4e-08
 Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 4/45 (8%)

Query: 38  IDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           +DY+H+ R+ IHRDIKP N L  +  +G  V I DFG++K + ++
Sbjct: 112 LDYLHTKRHIIHRDIKPSNLL--INSKGE-VKIADFGISKVLENT 153

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 48.5 bits (116), Expect = 5e-08
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 5/59 (8%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS--YERHVTTQTTR 94
           I Y HS N IHRDIKP+N L+       ++ + DFG A+ + + P+     +V T+  R
Sbjct: 113 IAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARPASPLTDYVATRWYR 168

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 48.4 bits (115), Expect = 5e-08
 Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 3/49 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           + Y+HS+++IHRD+   N L+       LV I DFGLAK VP    Y R
Sbjct: 120 MAYLHSQHYIHRDLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYR 165

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 48.4 bits (116), Expect = 5e-08
 Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           ++Y+HS   IHRD+KPDN L  +   G+L  + DFGL+K
Sbjct: 106 LEYLHSNGIIHRDLKPDNIL--IDSNGHLK-LTDFGLSK 141

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 48.0 bits (115), Expect = 6e-08
 Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
            +Y+H+R  I+RD+KP+N L  L   G  V ++DFG AK
Sbjct: 106 FEYLHNRGIIYRDLKPENLL--LDSNG-YVKLVDFGFAK 141

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 7/58 (12%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGN-LVYIIDFGLAKNVPSSPSYERHVTTQ--TTR 94
           YIHS N IHRD+KP N L+      +  + I DFG+A+ + SSP+  ++  T+   TR
Sbjct: 122 YIHSANVIHRDLKPSNLLVN----EDCELRIGDFGMARGLSSSPTEHKYFMTEYVATR 175

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 47.5 bits (113), Expect = 1e-07
 Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 3/41 (7%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
           +Y+HS++ I+RD+KP+N L  L  +G+ V + DFG AK VP
Sbjct: 132 EYLHSKDIIYRDLKPENLL--LDNKGH-VKVTDFGFAKKVP 169

Length = 329

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 38  IDYIHSRNFIHRDIKPDN-FLMGLGKRGNLVYIIDFGLAK--NVPSSPSYE 85
           + Y+HS   +HRD+KP N  +MG G    +V I D GLA+  N P  P  +
Sbjct: 121 VHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLAD 171

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVT 89
           Y+HS N IHRD+KP N L+        + I DFGLA+ V      +  +T
Sbjct: 118 YLHSANVIHRDLKPSNILV---NSNCDLKICDFGLARGVDPDEDEKGFLT 164

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 46.7 bits (111), Expect = 2e-07
 Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 16/97 (16%)

Query: 1   VKPFRSTQS----CLVFPYSYGTKSGEQIST-GKEDREWIGR--------IDYIHSRNFI 47
            K + S QS     LV  Y  G      I T G    +W  +        ++ +H R  I
Sbjct: 60  AKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGII 119

Query: 48  HRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           HRDIKP+N L  + + G+L  + DFGL++N   +  +
Sbjct: 120 HRDIKPENLL--IDQTGHL-KLTDFGLSRNGLENKKF 153

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 46.2 bits (110), Expect = 3e-07
 Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 6/55 (10%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL--AKNVPSSPSYERHVTT 90
           + Y H R  +HRD+KP N L  + +RG L  + DFGL  AK+VPS  +Y   V T
Sbjct: 116 LAYCHQRRVLHRDLKPQNLL--ISERGEL-KLADFGLARAKSVPSK-TYSNEVVT 166

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 3/42 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
           ++Y+HS + ++RD+KP+N L  L   G +  I DFG AK V 
Sbjct: 114 LEYLHSLDIVYRDLKPENLL--LDSDGYI-KITDFGFAKRVK 152

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 46.0 bits (109), Expect = 4e-07
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 3/45 (6%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           R+ +  I Y+H R+ +HRDIKP N L+   K    V I DFG+++
Sbjct: 175 RQILSGIAYLHRRHIVHRDIKPSNLLINSAKN---VKIADFGVSR 216

Length = 353

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 45.9 bits (109), Expect = 4e-07
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 10/59 (16%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS-------SPSY 84
           E    +D +H   +IHRD+KP+NFL  +   G+ + + DFGL+K + +       SP Y
Sbjct: 109 EMFEAVDALHELGYIHRDLKPENFL--IDASGH-IKLTDFGLSKGIVTYANSVVGSPDY 164

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 45.4 bits (108), Expect = 5e-07
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+HS   +HRDIKP N    L   G +    DFG A 
Sbjct: 112 LAYLHSHGIVHRDIKPANIF--LDHNGVIKL-GDFGCAV 147

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 44.9 bits (107), Expect = 9e-07
 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           +D++HS   +HRD+KP N L+    +   V I DFGLA+
Sbjct: 120 VDFLHSHRIVHRDLKPQNILVTSDGQ---VKIADFGLAR 155

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 44.9 bits (107), Expect = 9e-07
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 9/49 (18%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGN---LVYIIDFGLAKNVPSSPSYE 85
           YIHS N IHRD+KP N L+      N    V + DFGLA+++       
Sbjct: 122 YIHSGNVIHRDLKPSNILL------NSDCRVKLADFGLARSLSELEENP 164

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 12/68 (17%)

Query: 24  QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           QI+ G         ++Y+ S+ F+HRD+   N L+G      +V I DFGL+++V     
Sbjct: 113 QIAKG---------MEYLASKKFVHRDLAARNCLVG---EDLVVKISDFGLSRDVYDDDY 160

Query: 84  YERHVTTQ 91
           Y +    +
Sbjct: 161 YRKKTGGK 168

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 44.3 bits (105), Expect = 1e-06
 Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 3/36 (8%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG 73
           + Y+HSR  IHRDIKP N L  L ++G  V + DFG
Sbjct: 118 LSYLHSRKIIHRDIKPSNIL--LTRKGQ-VKLCDFG 150

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 3/40 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           I+Y+H  + +HRDIK  N L  +  +G L  I DFGLA+ 
Sbjct: 128 INYLHENHILHRDIKAANIL--IDNQGIL-KIADFGLARP 164

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           +Y+ S+NF+HRD+   N L+       +V I DFGL++++     Y
Sbjct: 116 EYLESKNFVHRDLAARNCLVT---ENLVVKISDFGLSRDIYEDDYY 158

Length = 258

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 43.3 bits (102), Expect = 3e-06
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 3/37 (8%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL 74
           I+ +H   FIHRDIKPDN L+    R   + + DFGL
Sbjct: 114 IESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 43.3 bits (102), Expect = 3e-06
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 17/73 (23%)

Query: 18  GTKSGEQISTGKE-------DREW------IGRIDYIHSRNFI-HRDIKPDNFLMGLGKR 63
           G   GE  ++ KE       +R W      +  + Y+H    I HRD+ P+N ++G   +
Sbjct: 93  GAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDK 152

Query: 64  GNLVYIIDFGLAK 76
              V I DFGLAK
Sbjct: 153 ---VTITDFGLAK 162

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 43.2 bits (102), Expect = 4e-06
 Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG 73
           +D IHS  FIHRD+KPDN L  L K G+L  + DFG
Sbjct: 155 LDAIHSMGFIHRDVKPDNML--LDKSGHL-KLADFG 187

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 43.2 bits (102), Expect = 4e-06
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 3/37 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           YIHS N +HRD+KP N L+        + I DFGLA+
Sbjct: 120 YIHSANVLHRDLKPGNLLVNADCE---LKICDFGLAR 153

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 42.8 bits (101), Expect = 4e-06
 Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 3/39 (7%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           Y+H RN +HRDIK  N L  +   G +V + DFG+AK V
Sbjct: 117 YLHDRNTVHRDIKGANIL--VDTNG-VVKLADFGMAKQV 152

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 42.8 bits (101), Expect = 4e-06
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 5/55 (9%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK--NVPSSPSYERHVTT 90
           ++Y H +NF+HRDIK  N L  L  +G +  + DFGLA+  N   S  Y   V T
Sbjct: 129 LNYCHKKNFLHRDIKCSNIL--LNNKGQI-KLADFGLARLYNSEESRPYTNKVIT 180

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 42.6 bits (100), Expect = 5e-06
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVT 89
           RE +  ++++HS   IHRDIK DN L+G+      V + DFG    +  +P   +  T
Sbjct: 122 RECLQALEFLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQI--TPEQSKRST 174

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 42.9 bits (101), Expect = 5e-06
 Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           +DY+H    IHRD+KPDN L  +   G+ + + DFGL+K
Sbjct: 117 LDYLHRHGIIHRDLKPDNML--ISNEGH-IKLTDFGLSK 152

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 42.5 bits (100), Expect = 6e-06
 Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 3/43 (6%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           E +  I+ +H   FIHRDIKPDN L+    RG  + + DFGL+
Sbjct: 109 ECVLAIEAVHKLGFIHRDIKPDNILI---DRGGHIKLSDFGLS 148

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 42.4 bits (100), Expect = 6e-06
 Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 3/46 (6%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           E +  ++Y+HS+  ++RD+KP+N L  L K G++  + DFG AK +
Sbjct: 109 EIVCALEYLHSKEIVYRDLKPENIL--LDKEGHI-KLTDFGFAKKL 151

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 42.2 bits (100), Expect = 7e-06
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSP-SYERHVTT 90
           + ++H    +HRD+K  N L+    RG L  I DFGLA+   S    Y + V T
Sbjct: 119 VAHLHDNWILHRDLKTSNLLL--NNRGILK-ICDFGLAREYGSPLKPYTQLVVT 169

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 42.1 bits (99), Expect = 8e-06
 Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           I Y HS   +HRD+KP N L  + +R N + + DFGLA+
Sbjct: 115 IAYCHSHRVLHRDLKPQNLL--IDRRTNALKLADFGLAR 151

Length = 294

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 42.3 bits (99), Expect = 8e-06
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 16/78 (20%)

Query: 10  CLVFPYSYGTK-----SGEQISTGKEDR------EWIGRIDYIHSRNFIHRDIKPDNFLM 58
           C V  Y+ G +     S E++ T  E+R      E +  ++Y+HSR+ ++RDIK +N + 
Sbjct: 71  CFVMEYANGGELFFHLSRERVFT--EERARFYGAEIVSALEYLHSRDVVYRDIKLENLM- 127

Query: 59  GLGKRGNLVYIIDFGLAK 76
            L K G+ + I DFGL K
Sbjct: 128 -LDKDGH-IKITDFGLCK 143

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 42.0 bits (99), Expect = 8e-06
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 3/37 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           YIHS N +HRD+KP N L+        + I DFGLA+
Sbjct: 123 YIHSANVLHRDLKPSNLLL---NANCDLKICDFGLAR 156

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 42.0 bits (98), Expect = 8e-06
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           RE +  +D++HS   IHRDIK DN L+G+      V + DFG    +    S
Sbjct: 122 RECLQALDFLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQS 170

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 41.9 bits (99), Expect = 8e-06
 Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 5/44 (11%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK--NVP 79
           I Y HS   +HRD+KP N L  + + G L  + DFGLA+   VP
Sbjct: 112 IAYCHSHRVLHRDLKPQNLL--IDREGAL-KLADFGLARAFGVP 152

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 41.9 bits (99), Expect = 1e-05
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 3/37 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           Y+ SRN+IHRD+   N L+G      +  I DFGLA+
Sbjct: 118 YLESRNYIHRDLAARNILVG---ENLVCKIADFGLAR 151

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 41.9 bits (99), Expect = 1e-05
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK--NVPSSPSYERHVTT 90
           + Y+H+   +HRD+KP N L  +   G L  I DFGLA+  +      Y   V T
Sbjct: 112 VAYMHANGIMHRDLKPANLL--ISADGVL-KIADFGLARLFSEEEPRLYSHQVAT 163

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 3/40 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           + + HS N +HRD+KP N L  + K G L  + DFGLA+ 
Sbjct: 112 LAFCHSHNVLHRDLKPQNLL--INKNGEL-KLADFGLARA 148

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 4/59 (6%)

Query: 37  RIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV-PSSPSYERHVTTQTTR 94
            +++ H  N IHRD+KP+N L+    +   + + DFG A+ +      Y  +V T+  R
Sbjct: 112 AVNFCHKHNCIHRDVKPENILI---TKQGQIKLCDFGFARILTGPGDDYTDYVATRWYR 167

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 41.5 bits (97), Expect = 1e-05
 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 8/54 (14%)

Query: 40  YIHSRNFIHRDIKPDNFLMG-LGKRGNLVYIIDFGLA--KNVPSSPSYERHVTT 90
           YIH ++ +HRD+KP N L+  LG+    + + DFGLA  K++PS  +Y   V T
Sbjct: 118 YIHGQHILHRDLKPQNLLISYLGE----LKLADFGLARAKSIPSQ-TYSSEVVT 166

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)

Query: 1   VKPFRSTQSCL-VFPYSYGTKSGEQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMG 59
           V P+ S  S L +   SY     ++       +E +  ++Y+HS   IHRDIK  N L  
Sbjct: 77  VMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNIL-- 134

Query: 60  LGKRGNLVYIIDFGLA 75
           LG+ G+ V I DFG++
Sbjct: 135 LGEDGS-VKIADFGVS 149

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 41.7 bits (98), Expect = 1e-05
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYII-DFGLAKNVPSSPSYERHVTTQTT 93
           YIHS N +HRD+KP N  +      +LV  I DFGLA+ V    S++ +++    
Sbjct: 129 YIHSANVLHRDLKPANVFI---NTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLV 180

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 3/38 (7%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           YIHS N +HRD+KP N L  L    +L  I DFGLA+ 
Sbjct: 121 YIHSANVLHRDLKPSNLL--LNTNCDL-KICDFGLARI 155

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 12/57 (21%)

Query: 23  EQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
            QI+ G           Y+ S+ FIHRD+   N L+      + V I DFGL + +P
Sbjct: 104 VQIANGMR---------YLESKRFIHRDLAARNILLA---SDDKVKIGDFGLMRALP 148

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 41.4 bits (97), Expect = 1e-05
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 12/53 (22%)

Query: 24  QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           QIS+  E         Y+  +NFIHRD+   N L+G     +LV + DFGL++
Sbjct: 112 QISSAME---------YLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSR 152

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 5/38 (13%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNL-VYIIDFGLAK 76
           YIHS   IHRD+KP N    +    +  + I+DFGLA+
Sbjct: 133 YIHSAGIIHRDLKPSN----IAVNEDCELKILDFGLAR 166

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|236586 PRK09605, PRK09605, bifunctional UGMP family protein/serine/threonine protein kinase; Validated

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 7/44 (15%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           E + ++   H    +H D+   NF++    R + +Y+IDFGL K
Sbjct: 439 EIVAKL---HKAGIVHGDLTTSNFIV----RDDRLYLIDFGLGK 475

Length = 535

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 41.6 bits (97), Expect = 1e-05
 Identities = 22/37 (59%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL 74
           ID IH   FIHRDIKPDN L  L  +G+ V + DFGL
Sbjct: 114 IDSIHQLGFIHRDIKPDNLL--LDSKGH-VKLSDFGL 147

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 41.5 bits (97), Expect = 1e-05
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 6/55 (10%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL--AKNVPSSPSYERHVTT 90
           + Y H R  +HRD+KP N L  + ++G L  + DFGL  AK+VP+  +Y   V T
Sbjct: 116 LSYCHKRKILHRDLKPQNLL--INEKGEL-KLADFGLARAKSVPTK-TYSNEVVT 166

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 41.3 bits (97), Expect = 1e-05
 Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 5/40 (12%)

Query: 38  IDYIHSRNFIHRDIKPDNFLM-GLGKRGNLVYIIDFGLAK 76
           ++Y+H+   +HRD+KPDN L+  +G     + + DFGL+K
Sbjct: 114 LEYLHNYGIVHRDLKPDNLLITSMGH----IKLTDFGLSK 149

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 41.6 bits (97), Expect = 2e-05
 Identities = 22/37 (59%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL 74
           ID IH   FIHRDIKPDN L  L  +G+ V + DFGL
Sbjct: 114 IDAIHQLGFIHRDIKPDNLL--LDAKGH-VKLSDFGL 147

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 4/53 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           +D++H     HRDIKP+N L+    + +++ + DFG  + + S P Y  +++T
Sbjct: 113 LDHMHRNGIFHRDIKPENILI----KDDILKLADFGSCRGIYSKPPYTEYIST 161

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 15/81 (18%)

Query: 1   VKPFRSTQSCLVFPYSYGTKSGEQISTGKEDR-----EWIGRIDYIHSRNFIHRDIKPDN 55
           V P   T   +V  Y  G    + I  G ++        +G++   H    +H D+   N
Sbjct: 67  VDPDNKT---IVMEYIEGKPLKDVIEEGNDELLREIGRLVGKL---HKAGIVHGDLTTSN 120

Query: 56  FLMGLGKRGNLVYIIDFGLAK 76
            ++    R + +Y+IDFGL K
Sbjct: 121 IIV----RDDKLYLIDFGLGK 137

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 41.3 bits (97), Expect = 2e-05
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + YIH    +HRDIK  N  +    +  L+ + DFG++K
Sbjct: 114 VSYIHKAGILHRDIKTLNIFL---TKAGLIKLGDFGISK 149

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 41.1 bits (96), Expect = 2e-05
 Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 5/64 (7%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP--SSPSYERHVTT 90
           + I  I + H  + +HRDIKP+N L+      +++ + DFG A+N+   S+ +Y  +V T
Sbjct: 108 QLIKAIHWCHKNDIVHRDIKPENLLI---SHNDVLKLCDFGFARNLSEGSNANYTEYVAT 164

Query: 91  QTTR 94
           +  R
Sbjct: 165 RWYR 168

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 40.9 bits (96), Expect = 2e-05
 Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+HS N I+RD+KP+N L  L  +G++V + DFGL K
Sbjct: 109 LGYLHSLNIIYRDLKPENIL--LDSQGHVV-LTDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 40.8 bits (95), Expect = 2e-05
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++++ SR  IHRD+   N L+      N+V I DFGLA+++   P Y R
Sbjct: 192 MEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVR 237

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 40.6 bits (95), Expect = 2e-05
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS 80
           + ++H++  +HRD+K  N L+   K   +V I DFG++K + S
Sbjct: 114 LHHVHTKLILHRDLKTQNILL--DKHKMVVKIGDFGISKILSS 154

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 40.9 bits (96), Expect = 2e-05
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 3/37 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           Y+ ++N+IHRD+   N L+G     N+  + DFGLA+
Sbjct: 118 YLEAQNYIHRDLAARNVLVG---ENNICKVADFGLAR 151

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 40.9 bits (96), Expect = 3e-05
 Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 7/58 (12%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVY-IIDFGLAKNVPSSPSYE--RHVTTQTTR 94
           Y+HS   +HRDIKP N L+      N V  I DFGLA+      S    + V TQ  R
Sbjct: 118 YLHSAGILHRDIKPGNLLVN----SNCVLKICDFGLARVEEPDESKHMTQEVVTQYYR 171

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 40.8 bits (95), Expect = 3e-05
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++++ SR  IHRD+   N L+      N+V I DFGLA+++   P Y R
Sbjct: 187 MEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVR 232

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 40.8 bits (95), Expect = 3e-05
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 40.6 bits (95), Expect = 3e-05
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 16/78 (20%)

Query: 10  CLVFPYSYGTK-----SGEQISTGKEDR------EWIGRIDYIHSRNFIHRDIKPDNFLM 58
           C V  Y+ G +     S E++ +  EDR      E +  + Y+HS + ++RD+K +N + 
Sbjct: 71  CFVMEYANGGELFFHLSRERVFS--EDRARFYGAEIVSALGYLHSCDVVYRDLKLENLM- 127

Query: 59  GLGKRGNLVYIIDFGLAK 76
            L K G+ + I DFGL K
Sbjct: 128 -LDKDGH-IKITDFGLCK 143

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 40.5 bits (94), Expect = 3e-05
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           RE +  ++++HS   IHRDIK DN L+G+      V + DFG    +    S
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQS 171

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 40.3 bits (94), Expect = 3e-05
 Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           I Y+HS N I+RD+KP+N L  L  +G++V + DFGL K
Sbjct: 109 IGYLHSLNIIYRDLKPENIL--LDSQGHVV-LTDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS 80
           Y+H +  IHRDIK  N L    K G  V + DFG+A  +  
Sbjct: 114 YLHEQGVIHRDIKAANILT--TKDGV-VKLADFGVATKLND 151

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 40.4 bits (94), Expect = 3e-05
 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 6/55 (10%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL--AKNVPSSPSYERHVTT 90
           + YIH R  +HRD+KP N L  +   G L  + DFGL  AK+VPS  +Y   V T
Sbjct: 116 LSYIHQRYILHRDLKPQNLL--ISDTGEL-KLADFGLARAKSVPSH-TYSNEVVT 166

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 39.9 bits (94), Expect = 4e-05
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           ++Y+HS   IHRDIK  N L  L + G    + DFG++
Sbjct: 112 LEYLHSNKKIHRDIKAGNIL--LNEEGQ-AKLADFGVS 146

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 40.4 bits (94), Expect = 4e-05
 Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL--AKNVPSSPSYERHVTT 90
           Y H R  +HRD+KP N L  + +RG L  + DFGL  AK+VP+  +Y   V T
Sbjct: 119 YCHRRKVLHRDLKPQNLL--INERGEL-KLADFGLARAKSVPTK-TYSNEVVT 167

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional

 Score = 39.9 bits (94), Expect = 4e-05
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 9/71 (12%)

Query: 11  LVFPYSYGTKSGEQISTGKEDREWIGR-----IDYIHSRNFIHRDIKPDNFLMGLGKRGN 65
           +V  Y  G    + I++   +   + R     +  +HS   IH D+   N ++     G 
Sbjct: 76  IVMEYIEGEPLKDLINSNGMEELELSREIGRLVGKLHSAGIIHGDLTTSNMIL----SGG 131

Query: 66  LVYIIDFGLAK 76
            +Y+IDFGLA+
Sbjct: 132 KIYLIDFGLAE 142

Length = 211

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 40.2 bits (94), Expect = 4e-05
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++++ SR  IHRD+   N L+      N+V I DFGLA+++   P Y R
Sbjct: 186 MEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVR 231

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 39.9 bits (93), Expect = 5e-05
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 9/59 (15%)

Query: 9   SCLVFP------YSYGTKSGEQISTGK---EDREWIGRIDYIHSRNFIHRDIKPDNFLM 58
           +CLV P      Y+Y       +   +     R+ +  IDYIH    IHRDIK +N L+
Sbjct: 235 TCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLV 293

Length = 461

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 39.8 bits (93), Expect = 5e-05
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 5/53 (9%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN--VPSSPSYERHVTT 90
           + H    +HRD+KP N L  + K+  L+ I D GL +   +P   SY   + T
Sbjct: 125 HCHKHGVMHRDLKPQNLL--VDKQKGLLKIADLGLGRAFSIPVK-SYTHEIVT 174

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 40.0 bits (93), Expect = 5e-05
 Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG 73
           +D IHS  FIHRD+KPDN L  L K G+L  + DFG
Sbjct: 155 LDAIHSMGFIHRDVKPDNML--LDKSGHL-KLADFG 187

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 39.7 bits (93), Expect = 5e-05
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN--VPSSPSYERHVT 89
           + Y+H    IHRD+K  N L+        + I DFGLA+   +P+ P   + VT
Sbjct: 121 LQYLHENFIIHRDLKVSNLLL---TDKGCLKIADFGLARTYGLPAKPMTPKVVT 171

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 39.6 bits (92), Expect = 7e-05
 Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 6/55 (10%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL--AKNVPSSPSYERHVTT 90
           ++Y H R  +HRD+KP N L  + +RG L  + DFGL  AK++P+  +Y   V T
Sbjct: 117 LNYCHRRKVLHRDLKPQNLL--INERGEL-KLADFGLARAKSIPTK-TYSNEVVT 167

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 39.4 bits (92), Expect = 7e-05
 Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG 73
           E +  ID +H   ++HRDIKPDN L  L K G+ + + DFG
Sbjct: 110 EMVLAIDSVHQLGYVHRDIKPDNVL--LDKNGH-IRLADFG 147

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.4 bits (92), Expect = 7e-05
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)

Query: 27  TGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           T K  R+ +  ++Y+HS   +HRDIK  N L      GN V + DFG +K
Sbjct: 106 TRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSA--GN-VKLGDFGASK 152

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 39.5 bits (92), Expect = 8e-05
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 12/61 (19%)

Query: 24  QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           QI++G         + Y+ S NF+HRD+   N L+G   +   + I DFG+++N+ S   
Sbjct: 138 QIASG---------MKYLSSLNFVHRDLATRNCLVG---KNYTIKIADFGMSRNLYSGDY 185

Query: 84  Y 84
           Y
Sbjct: 186 Y 186

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 39.3 bits (91), Expect = 9e-05
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           RE +  ++++H+   IHRDIK DN L+G+   G+ V + DFG    +    S
Sbjct: 122 RECLQALEFLHANQVIHRDIKSDNVLLGM--DGS-VKLTDFGFCAQITPEQS 170

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 38.9 bits (91), Expect = 9e-05
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 3/47 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           +DY+ S+ +IHRD+   N L+   +  +LV I DFGLAK +P    Y
Sbjct: 122 MDYLGSQRYIHRDLAARNILV---ESEDLVKISDFGLAKVLPEDKDY 165

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL 74
           E    ++ +H   FIHRDIKPDN L+    R   + + DFGL
Sbjct: 109 ELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 3/37 (8%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL 74
           I+ +H   FIHRDIKPDN L+ L      + + DFGL
Sbjct: 114 IESVHKMGFIHRDIKPDNILIDLDGH---IKLTDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 12/63 (19%)

Query: 33  EWIGRI--------DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           EWI  I         Y+H    IHRDIK  N L  L K    V ++DFG++  +  S   
Sbjct: 113 EWIAYILRETLRGLAYLHENKVIHRDIKGQNIL--LTKNAE-VKLVDFGVSAQL-DSTLG 168

Query: 85  ERH 87
            R+
Sbjct: 169 RRN 171

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 38.9 bits (90), Expect = 1e-04
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 9/65 (13%)

Query: 23  EQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG----LAKNV 78
           EQI+T  E    +  + Y+HS+  IHRDIK D+ L+ L  R   V + DFG    ++K+V
Sbjct: 117 EQIATVCESV--LQALCYLHSQGVIHRDIKSDSILLTLDGR---VKLSDFGFCAQISKDV 171

Query: 79  PSSPS 83
           P   S
Sbjct: 172 PKRKS 176

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 38.9 bits (90), Expect = 1e-04
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 185

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 38.8 bits (90), Expect = 1e-04
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 4/39 (10%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+H R  +HRD+K  N  +    + NL+ I DFG+++
Sbjct: 119 VHYMHQRRILHRDLKAKNIFL----KNNLLKIGDFGVSR 153

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 39.0 bits (91), Expect = 1e-04
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           RE +  + YIH    IHRDIK  N L  +   GN V + DFG+A  +  + S
Sbjct: 108 REVLVALKYIHKVGVIHRDIKAANIL--VTNTGN-VKLCDFGVAALLNQNSS 156

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 131 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 184

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 38.4 bits (89), Expect = 1e-04
 Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 3/45 (6%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           R+++  +D++H+   +HRD+KP+N L+     G  V + DFGLA+
Sbjct: 115 RQFLRGLDFLHANCIVHRDLKPENILV---TSGGQVKLADFGLAR 156

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
           ++ +H  N IH DIK +N L    K    +Y+ D+GL K + +   Y+  +
Sbjct: 122 LNDLHKHNIIHNDIKLENVLYDRAKDR--IYLCDYGLCKIIGTPSCYDGTL 170

Length = 267

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           Y+   +FIHRDI   N L+     G +  I DFG+A+++  +  Y +
Sbjct: 131 YLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRK 177

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 3/50 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           ++++ S+  IHRD+   N L+      +++ I DFGLA+++     Y + 
Sbjct: 145 MEFLASKKCIHRDLAARNVLVT---EDHVMKIADFGLARDIHHIDYYRKT 191

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 9/61 (14%)

Query: 23  EQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG----LAKNV 78
           EQI+T       +  + ++H++  IHRDIK D+ L+        V + DFG    ++K V
Sbjct: 115 EQIAT--VCLAVLKALSFLHAQGVIHRDIKSDSILL---TSDGRVKLSDFGFCAQVSKEV 169

Query: 79  P 79
           P
Sbjct: 170 P 170

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           I + H    +HRD+KP N L  + KRG L  + DFGLA+
Sbjct: 113 IAFCHENRVLHRDLKPQNLL--INKRGEL-KLADFGLAR 148

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 38.1 bits (88), Expect = 2e-04
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           +D++HS   +HRD+KP N L+        + + DFGLA+
Sbjct: 123 LDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLAR 158

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|216618 pfam01636, APH, Phosphotransferase enzyme family

 Score = 37.9 bits (88), Expect = 2e-04
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 46  FIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
            +H D+ P N L+  G  G +  +IDF  A
Sbjct: 167 LVHGDLHPGNLLVDPG--GRVTGVIDFEDA 194

This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881. Length = 238

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 38.1 bits (88), Expect = 2e-04
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   ++     +V T+  R
Sbjct: 136 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTACTNFMMTPYVVTRYYR 189

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 38.1 bits (88), Expect = 2e-04
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 3/41 (7%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG 73
           E +  ID +H  +++HRDIKPDN LM +      + + DFG
Sbjct: 110 EMVIAIDSVHQLHYVHRDIKPDNILMDMNGH---IRLADFG 147

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 37.9 bits (88), Expect = 2e-04
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 5/55 (9%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           Y+HS   +HRD+KP N L+        + I DFGLA+     P    +V+T+  R
Sbjct: 123 YVHSAGVVHRDLKPSNILI---NENCDLKICDFGLAR--IQDPQMTGYVSTRYYR 172

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 12/61 (19%)

Query: 24  QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           QI+ G         ++Y+ S +F+HRD+   N L+G    G  V I DFGL++++ S+  
Sbjct: 132 QIAAG---------MEYLSSHHFVHRDLAARNCLVG---EGLTVKISDFGLSRDIYSADY 179

Query: 84  Y 84
           Y
Sbjct: 180 Y 180

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 10/53 (18%)

Query: 38  IDYIHSRN-----FIHRDIKPDN-FLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           +   H+R+      +HRD+KP N FL       N V + DFGLAK +    S+
Sbjct: 118 LYECHNRSDPGNTVLHRDLKPANIFLDA----NNNVKLGDFGLAKILGHDSSF 166

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 38.0 bits (88), Expect = 3e-04
 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 12/78 (15%)

Query: 11  LVFPYSYGTKSGEQISTGK--EDR------EWIGRIDYIHSRNFIHRDIKPDNFLMGLGK 62
           LV P+  GT  G+ +   K  EDR      + +  + YIH+   IHRD+KP N  + + +
Sbjct: 97  LVMPF-MGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGN--LAVNE 153

Query: 63  RGNLVYIIDFGLAKNVPS 80
              L  I+DFGLA+   S
Sbjct: 154 DCEL-KILDFGLARQTDS 170

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 37.7 bits (87), Expect = 3e-04
 Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+HS N ++RD+KP+N L  L  +G++V + DFGL K
Sbjct: 109 LGYLHSLNIVYRDLKPENIL--LDSQGHIV-LTDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 37.6 bits (87), Expect = 3e-04
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           +DY+ SR ++HRD+   N L+   +  + V I DFGL K + +   Y
Sbjct: 122 MDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKAIETDKEY 165

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 37.7 bits (87), Expect = 3e-04
 Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 3/36 (8%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG 73
           +D IHS   IHRD+KPDN L  L K G+L  + DFG
Sbjct: 155 LDAIHSMGLIHRDVKPDNML--LDKHGHL-KLADFG 187

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 37.5 bits (87), Expect = 3e-04
 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 9/42 (21%)

Query: 38  IDYIHSRNFIHRDIKPDNFLM---GLGKRGNLVYIIDFGLAK 76
           + ++HS++ IHRDIK  N L+   GL K G      DFG +K
Sbjct: 156 VHHVHSKHMIHRDIKSANILLCSNGLVKLG------DFGFSK 191

Length = 496

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           +Y+H    ++RD+KP+N L  L + G+++ + DF L+K     P    
Sbjct: 117 EYLHLLGIVYRDLKPENIL--LHESGHIM-LSDFDLSKQSDVEPPPVS 161

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 37.5 bits (87), Expect = 3e-04
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           Y+H    IHRD+K  N L+     G  + I DFG A
Sbjct: 118 YLHENQIIHRDVKGANLLI--DSTGQRLRIADFGAA 151

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 37.5 bits (87), Expect = 3e-04
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 9/66 (13%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ 91
           R+ +  ++Y+H+R  IHRDIK  N L  +  +G  + I DFG++K +      E +  + 
Sbjct: 113 RQILKGLNYLHNRGIIHRDIKGANIL--VDNKGG-IKISDFGISKKL------EANSLST 163

Query: 92  TTRIGR 97
            T   R
Sbjct: 164 KTNGAR 169

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 37.5 bits (87), Expect = 4e-04
 Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 3/47 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           + ++ S+N IHRD+   N L+  GK   +V I DFGLA+++ +  +Y
Sbjct: 154 MAFLASKNCIHRDLAARNVLLTHGK---IVKICDFGLARDIMNDSNY 197

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 12/61 (19%)

Query: 24  QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           QI++G         + Y+ S NF+HRD+   N L+G       + I DFG+++N+ S   
Sbjct: 137 QIASG---------MKYLASLNFVHRDLATRNCLVG---NHYTIKIADFGMSRNLYSGDY 184

Query: 84  Y 84
           Y
Sbjct: 185 Y 185

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           ++Y+ S+ ++HRD+   N L+   +  N V I DFGL K +P    Y
Sbjct: 121 MEYLGSKRYVHRDLATRNILV---ESENRVKIGDFGLTKVLPQDKEY 164

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 37.3 bits (87), Expect = 4e-04
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           RE +  + Y+H    IHRDIK  N L  L + G+ V + DFG++
Sbjct: 108 RETLKGLAYLHETGKIHRDIKGANIL--LTEDGD-VKLADFGVS 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 3/47 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           ++++ S+N +HRD+   N L+  GK   LV I DFGLA+++    +Y
Sbjct: 252 MEFLASKNCVHRDLAARNVLICEGK---LVKICDFGLARDIMRDSNY 295

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 37.0 bits (86), Expect = 5e-04
 Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           I + HSR  +HRD+KP N L  +  +G ++ + DFGLA+
Sbjct: 114 ILFCHSRRVLHRDLKPQNLL--IDNKG-VIKLADFGLAR 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 36.9 bits (85), Expect = 5e-04
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           Y+ S++F+HRD+   N L+G      LV I DFG++++V S+  Y
Sbjct: 138 YLASQHFVHRDLATRNCLVG---ANLLVKIGDFGMSRDVYSTDYY 179

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 37.2 bits (86), Expect = 5e-04
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           + ++ S+N IHRD+   N L+     G +  I DFGLA+++ +  +Y
Sbjct: 227 MSFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIRNDSNY 270

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 36.9 bits (85), Expect = 5e-04
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           + YIHS+   HRD+KP N L  +    + + + DFG AKN+
Sbjct: 183 LAYIHSKFICHRDLKPQNLL--IDPNTHTLKLCDFGSAKNL 221

Length = 440

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 36.9 bits (85), Expect = 5e-04
 Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           RE +  +DY+HS   IHRDIK  N L  L ++G+ V + DFG+A
Sbjct: 108 REILKGLDYLHSERKIHRDIKAANVL--LSEQGD-VKLADFGVA 148

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 36.7 bits (85), Expect = 5e-04
 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 5/47 (10%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNL-VYIIDFGLAKNVPSSPSYE 85
           Y+  R F+HRD+   N L+G     N+ V I DFGL++N+ S+  Y+
Sbjct: 145 YLSERKFVHRDLATRNCLVG----ENMVVKIADFGLSRNIYSADYYK 187

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 36.9 bits (85), Expect = 5e-04
 Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 3/47 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           ++++ S+N +HRD+   N L+  GK   +V I DFGLA+++    +Y
Sbjct: 250 MEFLASKNCVHRDLAARNVLLAQGK---IVKICDFGLARDIMHDSNY 293

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 37.0 bits (86), Expect = 5e-04
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 3/37 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           YIH    +HRD+K  N L+    +  ++ + DFGLA+
Sbjct: 134 YIHRNKILHRDMKAANILI---TKDGILKLADFGLAR 167

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 37.0 bits (86), Expect = 5e-04
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 6/57 (10%)

Query: 41  IHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK---NVPSSPSYERHVTTQTTR 94
           +H   F+HRD+ P N    +  +G +  I DFGLA+     P S +  +  T Q   
Sbjct: 135 LHKWYFMHRDLSPANIF--INSKG-ICKIADFGLARRYGYPPYSDTLSKDETMQRRE 188

Length = 335

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 36.7 bits (85), Expect = 5e-04
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 9/40 (22%)

Query: 40  YIHSRNFIHRDIKPDNFLM---GLGKRGNLVYIIDFGLAK 76
           Y+HS+  +HRD+K DN L+   G+ K      I DFG++K
Sbjct: 123 YLHSKGILHRDLKADNLLVDADGICK------ISDFGISK 156

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional

 Score = 36.9 bits (85), Expect = 6e-04
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 3/38 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           ++YIH     H DIKP+N ++    RG   YIID+G+A
Sbjct: 139 LEYIHEHGISHGDIKPENIMVDGNNRG---YIIDYGIA 173

Length = 294

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 36.9 bits (85), Expect = 6e-04
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG 73
           E +  I  IH  +++HRDIKPDN L+ +      + + DFG
Sbjct: 110 EMVLAIHSIHQLHYVHRDIKPDNVLLDMNGH---IRLADFG 147

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 36.7 bits (85), Expect = 6e-04
 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 3/47 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           +D++ S+N IHRD+   N L+     G +  I DFGLA+++ +  +Y
Sbjct: 225 MDFLASKNCIHRDVAARNVLL---TDGRVAKICDFGLARDIMNDSNY 268

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 36.7 bits (85), Expect = 6e-04
 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 5/48 (10%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNL-VYIIDFGLAKNVPSSPSY 84
           ++Y+ +RNFIHRD+   N ++    R ++ V + DFGL+K + S   Y
Sbjct: 126 MEYLSNRNFIHRDLAARNCML----REDMTVCVADFGLSKKIYSGDYY 169

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 37.0 bits (85), Expect = 6e-04
 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFL-MGLGKRGNLVYIIDFGLAK--NVPSSP 82
           I Y+H+   +HRD+KP N L MG G     V I D G A+  N P  P
Sbjct: 121 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 168

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 36.9 bits (85), Expect = 6e-04
 Identities = 18/37 (48%), Positives = 27/37 (72%), Gaps = 3/37 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           Y+HS N ++RD+KP+N L  L  +G++V + DFGL K
Sbjct: 111 YLHSINIVYRDLKPENIL--LDSQGHVV-LTDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 36.8 bits (86), Expect = 6e-04
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 3/37 (8%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           +Y+H    IHRDIK  N L  L + G+ V + DFG++
Sbjct: 112 EYLHEEGKIHRDIKAANIL--LSEEGD-VKLADFGVS 145

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 36.6 bits (84), Expect = 7e-04
 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFL-MGLGKRGNLVYIIDFGLAK--NVPSSP 82
           I Y+H+   +HRD+KP N L MG G     V I D G A+  N P  P
Sbjct: 121 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 168

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 36.4 bits (84), Expect = 7e-04
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 5/51 (9%)

Query: 29  KEDREWIGRIDYIHSRNFIHRDIKPDN-FLMGLGKRGNLVYIIDFGLAKNV 78
           K  ++ +  + Y+H+   +HRDIK +N  LM  G    ++ +IDFG A+ +
Sbjct: 106 KYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNG----IIKLIDFGCARRL 152

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 36.6 bits (85), Expect = 7e-04
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+H    ++RD+K DN L  L   G  V I DFGL K
Sbjct: 114 LQYLHENKIVYRDLKLDNLL--LDTEG-FVKIADFGLCK 149

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 36.6 bits (85), Expect = 8e-04
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 14/84 (16%)

Query: 3   PFRSTQSCLVFPYSYGT--KSGEQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL 60
              S  +C     S+ T      QI++G         + Y+ S NF+HRD+   N L+G 
Sbjct: 115 AETSGLACNSKSLSFSTLLYMATQIASG---------MRYLESLNFVHRDLATRNCLVG- 164

Query: 61  GKRGNLVYIIDFGLAKNVPSSPSY 84
             +   + I DFG+++N+ SS  Y
Sbjct: 165 --KNYTIKIADFGMSRNLYSSDYY 186

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 36.6 bits (84), Expect = 8e-04
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           + YIHS + IHRD+KP N  +        + I+DFGLA++
Sbjct: 133 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH 169

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 36.3 bits (84), Expect = 8e-04
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + YIH+ N  HRD+KP N L     +   + I DFGLA+
Sbjct: 116 LKYIHTANVFHRDLKPKNILANADCK---LKICDFGLAR 151

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 36.3 bits (84), Expect = 9e-04
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 12/69 (17%)

Query: 8   QSCLVFPYSYGTKSGEQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLV 67
           QS   F  +       +I  G         + ++H +  I+RD+K DN L  L K G+ +
Sbjct: 88  QSSGRFDEARARFYAAEIICG---------LQFLHKKGIIYRDLKLDNVL--LDKDGH-I 135

Query: 68  YIIDFGLAK 76
            I DFG+ K
Sbjct: 136 KIADFGMCK 144

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 36.2 bits (83), Expect = 9e-04
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL-AKNV 78
           R+ +  + Y+HS   IHRD+K  N L+ L      + + DFG+ AKNV
Sbjct: 117 RQMLEALQYLHSMKIIHRDLKAGNVLLTLDGD---IKLADFGVSAKNV 161

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 36.2 bits (84), Expect = 0.001
 Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 4/45 (8%)

Query: 38  IDYIHSR-NFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           ++Y+HS+ + IHRD+KP N L  + + G  V + DFG++  +  S
Sbjct: 116 LEYLHSKLSVIHRDVKPSNVL--INRNGQ-VKLCDFGISGYLVDS 157

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 36.2 bits (83), Expect = 0.001
 Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 3/44 (6%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           RE +  +DY+HS   IHRDIK  N L  L + G  V + DFG+A
Sbjct: 108 REILKGLDYLHSEKKIHRDIKAANVL--LSEHGE-VKLADFGVA 148

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++Y+ S+NFIHRD+   N ++        V + DFGL+K + S   Y +
Sbjct: 126 MEYLSSKNFIHRDLAARNCML---NENMTVCVADFGLSKKIYSGDYYRQ 171

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 35.9 bits (83), Expect = 0.001
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 7/51 (13%)

Query: 30  EDREWIGRI----DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           E R +I  I    D++H    I+RDIK +N L  L   G++V + DFGL+K
Sbjct: 106 EVRVYIAEIVLALDHLHQLGIIYRDIKLENIL--LDSEGHVV-LTDFGLSK 153

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 35.8 bits (82), Expect = 0.001
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + YIHS   IHRD+KP N  +        + I+DFGLA+
Sbjct: 131 LKYIHSAGIIHRDLKPSNVAV---NEDCELRILDFGLAR 166

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 35.6 bits (82), Expect = 0.001
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 3/38 (7%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           YIHS   IHRD+KP N  +        + I+DFGLA++
Sbjct: 132 YIHSAGIIHRDLKPGNLAV---NEDCELKILDFGLARH 166

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 35.9 bits (83), Expect = 0.001
 Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 16/76 (21%)

Query: 13  FPY---SYGTKSGEQISTGKEDRE--WIGRI--------DYIHSRNFIHRDIKPDNFLMG 59
           FPY    Y     + +  G E RE   I  I        D +HS   +HRD+KP N +  
Sbjct: 231 FPYNVEPYLLGKVQDLPKGLE-RENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFS 289

Query: 60  LGKRGNLVYIIDFGLA 75
            G       IID G A
Sbjct: 290 EGSGS--FKIIDLGAA 303

Length = 566

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 35.7 bits (82), Expect = 0.001
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           ++Y+ + NF+HRD+   N L+      N+  + DFGL K   S+
Sbjct: 115 MEYLEANNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASST 155

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 3/44 (6%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           +E +  +DY+HS   IHRDIK  N L  L ++G+ V + DFG+A
Sbjct: 108 KEILKGLDYLHSEKKIHRDIKAANVL--LSEQGD-VKLADFGVA 148

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 35.7 bits (82), Expect = 0.002
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 3/37 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           YI   N+IHRD++  N L+G    G +  I DFGLA+
Sbjct: 117 YIERMNYIHRDLRSANILVG---DGLVCKIADFGLAR 150

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 35.6 bits (82), Expect = 0.002
 Identities = 14/54 (25%), Positives = 27/54 (50%)

Query: 42  HSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRI 95
           H++  +HRD+KP N ++          ++DFG+   +P     +    T+TT +
Sbjct: 96  HNQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEV 149

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 35.6 bits (82), Expect = 0.002
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 40  YIHSRNFIHRDIKPDNFLMGL--GKRGNLVYIIDFGLAKNVPSSPSYER 86
           Y+   +FIHRD+   N L+         +V I DFGLA+++  S  Y +
Sbjct: 121 YLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRK 169

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 35.3 bits (81), Expect = 0.002
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           + +IH R  +HRDIK  N    L K G +  + DFG+A+ +  S     
Sbjct: 114 LKHIHDRKILHRDIKSQNIF--LSKNGMVAKLGDFGIARQLNDSMELAY 160

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 17/39 (43%), Positives = 28/39 (71%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           +D++HS   I+RD+KP+N L  L + G+ + + DFGL+K
Sbjct: 111 LDHLHSLGIIYRDLKPENIL--LDEEGH-IKLTDFGLSK 146

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 12/82 (14%)

Query: 4   FRSTQSCLVFP------YSYGTKSGEQI---STGKEDREWIGRIDYIHSRNFIHRDIKPD 54
                +C+V P      Y+Y TK    +        +++ +  + Y+H++  IHRD+K +
Sbjct: 127 VSGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTE 186

Query: 55  NFLMGLGKRGNLVYIIDFGLAK 76
           N  +      + V I D G A+
Sbjct: 187 NIFI---NDVDQVCIGDLGAAQ 205

Length = 357

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
           ++++H R  ++RD+KP+N L  L   GN V I D GLA  + 
Sbjct: 108 LEHLHQRRIVYRDLKPENVL--LDDHGN-VRISDLGLAVELK 146

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 3/38 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           ++++H R  I+RD+KP+N L  L   GN V I D GLA
Sbjct: 110 LEHLHQRRIIYRDLKPENVL--LDNDGN-VRISDLGLA 144

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 35.0 bits (81), Expect = 0.002
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 3/37 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           ++H R  I+RD+K DN L  L   G+ + I DFG+ K
Sbjct: 111 FLHERGIIYRDLKLDNVL--LDSEGH-IKIADFGMCK 144

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 35.0 bits (81), Expect = 0.002
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 4/41 (9%)

Query: 38  IDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           + Y+H     IHRD+KP N L+    RG  + + DFG++  
Sbjct: 113 LTYLHEKHKIIHRDVKPSNILV--NSRGQ-IKLCDFGVSGQ 150

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 35.0 bits (80), Expect = 0.002
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           Y+ S++F+HRD+   N L+G      LV I DFG++++V S+  Y
Sbjct: 135 YLASQHFVHRDLATRNCLVG---ENLLVKIGDFGMSRDVYSTDYY 176

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 35.0 bits (80), Expect = 0.002
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)

Query: 38  IDYIHSRNFIHRDIKPDN-FLMGLGKRGNLVYIIDFGLAKNVPSSPSYE 85
           +D +HSR  +HRD+K  N FLM  G    ++ + DFG +K    S S +
Sbjct: 182 LDEVHSRKMMHRDLKSANIFLMPTG----IIKLGDFGFSKQYSDSVSLD 226

Length = 478

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 35.1 bits (81), Expect = 0.003
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 12/55 (21%)

Query: 22  GEQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
             QI+ G         + Y+  +  +HRD+   N L+   K    V I DFGLAK
Sbjct: 115 CVQIAKG---------MSYLEEKRLVHRDLAARNVLV---KTPQHVKITDFGLAK 157

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 34.7 bits (80), Expect = 0.003
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           Y+ S  FIHRD+   N L+G     N+V + DFGLA+ V
Sbjct: 115 YLESNGFIHRDLAARNCLVG---EDNVVKVSDFGLARYV 150

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 34.9 bits (80), Expect = 0.003
 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 5/46 (10%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNL-VYIIDFGLAKNVPSSPSY 84
           Y+ S NF+HRD+   N L+G     NL + I DFG+++N+ +   Y
Sbjct: 153 YLSSLNFVHRDLATRNCLVG----ENLTIKIADFGMSRNLYAGDYY 194

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 35.0 bits (80), Expect = 0.003
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 3/35 (8%)

Query: 41  IHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           +H    +HRDIKP+N L+ +  +   V IIDFG A
Sbjct: 325 LHRIGIVHRDIKPENLLVTVDGQ---VKIIDFGAA 356

Length = 507

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 35.0 bits (80), Expect = 0.003
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           +Y+ S N ++RD+KP+N L+    +   + + DFG AK V
Sbjct: 145 EYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVV 181

Length = 340

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 34.9 bits (80), Expect = 0.003
 Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           ++ +H  N I+RD+KP+N L  L  +G++  + DFGL K
Sbjct: 106 LENLHKFNVIYRDLKPENIL--LDYQGHIA-LCDFGLCK 141

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|226168 COG3642, COG3642, Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

 Score = 34.6 bits (80), Expect = 0.003
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 7/42 (16%)

Query: 35  IGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           +G++   H    +H D+   N ++     G  +Y IDFGL +
Sbjct: 105 VGKL---HKAGIVHGDLTTSNIIL----SGGRIYFIDFGLGE 139

Length = 204

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 34.5 bits (79), Expect = 0.003
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 7/47 (14%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVY--IIDFGLAKNVPSSPSY 84
           Y+  +NF+HRD+   N L+      N  Y  I DFGL+K + +  SY
Sbjct: 110 YLEGKNFVHRDLAARNVLL-----VNQHYAKISDFGLSKALGADDSY 151

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 34.8 bits (80), Expect = 0.003
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 15/76 (19%)

Query: 10  CLVFP------YSYGTKSG----EQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMG 59
           C+V P      ++Y  +SG    EQ  T    R  +  + Y+H R  IHRD+K +N    
Sbjct: 162 CMVMPKYKCDLFTYVDRSGPLPLEQAIT--IQRRLLEALAYLHGRGIIHRDVKTENIF-- 217

Query: 60  LGKRGNLVYIIDFGLA 75
           L +  N V + DFG A
Sbjct: 218 LDEPENAV-LGDFGAA 232

Length = 392

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 34.7 bits (79), Expect = 0.004
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 12/76 (15%)

Query: 10  CLVFPYSYGTKSGEQISTGK---EDR------EWIGRIDYIHSRNFIHRDIKPDNFLMGL 60
           C V  Y  G +    +S  +   EDR      E +  +DY+HS   ++RD+K +N +  L
Sbjct: 71  CFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLM--L 128

Query: 61  GKRGNLVYIIDFGLAK 76
            K G+ + I DFGL K
Sbjct: 129 DKDGH-IKITDFGLCK 143

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 34.4 bits (79), Expect = 0.004
 Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           ++++H +  I+RD+KP+N L  L  +G+ V + DFGL K
Sbjct: 113 LEHLHQQGIIYRDLKPENIL--LDAQGH-VKLTDFGLCK 148

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 34.4 bits (79), Expect = 0.004
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)

Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           E +  I  +H   ++HRDIKP+N L+    R   + + DFG A
Sbjct: 110 ELVLAIHSVHQMGYVHRDIKPENVLI---DRTGHIKLADFGSA 149

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 34.4 bits (79), Expect = 0.004
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 6/55 (10%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK--NVPSSPSYERHVTT 90
           + + HS   +HRD+KP N L  +   G  + + DFGLA+   VP   +Y   V T
Sbjct: 113 LAFCHSHRVLHRDLKPQNLL--INTEGA-IKLADFGLARAFGVPVR-TYTHEVVT 163

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 34.3 bits (79), Expect = 0.004
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 4/39 (10%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL-AKN 77
           ++HS   IHRD+K  N L+        V + DFG+ AKN
Sbjct: 118 FLHSHKVIHRDLKAGNILL---TLDGDVKLADFGVSAKN 153

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 33.9 bits (78), Expect = 0.004
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 3/30 (10%)

Query: 46  FIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
             H D+ P N L+     G ++ IID+  A
Sbjct: 110 LCHGDLHPGNILV---DDGKILGIIDWEYA 136

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 34.4 bits (79), Expect = 0.004
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
           ++ +H    ++RD+KP+N L  L   G+ + I D GLA  +P
Sbjct: 115 LEDLHRERIVYRDLKPENIL--LDDYGH-IRISDLGLAVEIP 153

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	99
KOG0615|consensus	475		99.92
KOG0595|consensus	429		99.91
KOG0661|consensus	538		99.88
KOG0600|consensus	560		99.88
KOG0616|consensus	355		99.87
KOG0583|consensus	370		99.86
KOG0663|consensus	419		99.86
KOG0598|consensus	357		99.86
KOG0593|consensus	396		99.86
KOG0581|consensus	364		99.86
KOG0592|consensus	604		99.85
KOG0594|consensus	323		99.84
KOG0611|consensus	668		99.83
KOG0659|consensus	318		99.82
KOG0575|consensus	592		99.82
KOG0578|consensus	550		99.8
KOG0694|consensus	694		99.8
KOG0599|consensus	411		99.8
KOG0690|consensus	516		99.78
KOG0588|consensus	786		99.78
KOG0604|consensus	400		99.78
KOG0612|consensus	1317		99.77
KOG0192|consensus	362		99.76
KOG0660|consensus	359		99.76
KOG0197|consensus	468		99.76
KOG0033|consensus	355		99.75
KOG0585|consensus	576		99.75
KOG0696|consensus	683		99.75
KOG0658|consensus	364		99.74
KOG0586|consensus	596		99.74
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.73
KOG0589|consensus	426		99.73
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.73
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.72
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.72
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.71
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.71
KOG0198|consensus	313		99.71
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.71
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.71
KOG4717|consensus	864		99.71
KOG1187|consensus	361		99.71
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.71
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.71
KOG0032|consensus	382		99.71
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.7
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.7
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.7
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.7
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.7
KOG4721|consensus	904		99.7
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.7
KOG0580|consensus	281		99.7
PTZ00267	478	NIMA-related protein kinase; Provisional	99.7
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.7
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.7
KOG0605|consensus	550		99.7
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.7
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.7
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.7
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.7
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.7
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.7
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.7
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.69
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.69
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.69
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.69
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.69
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.69
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.69
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.69
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.69
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.69
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.69
KOG0666|consensus	438		99.69
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.69
KOG0669|consensus	376		99.69
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.69
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.68
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.68
KOG4250|consensus	732		99.68
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.68
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.68
KOG0986|consensus	591		99.68
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.68
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.67
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.67
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.67
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.66
KOG0582|consensus	516		99.66
KOG0591|consensus	375		99.66
KOG0614|consensus	732		99.66
KOG0667|consensus	586		99.65
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.65
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.65
PTZ00283	496	serine/threonine protein kinase; Provisional	99.64
KOG0695|consensus	593		99.64
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.64
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.63
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.63
PTZ00036	440	glycogen synthase kinase; Provisional	99.63
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.63
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.63
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.63
KOG0196|consensus	996		99.62
KOG4236|consensus	888		99.62
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.62
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.61
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.61
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.61
KOG1026|consensus	774		99.61
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.6
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.6
KOG0608|consensus	1034		99.59
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.59
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.59
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.59
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.58
KOG0662|consensus	292		99.58
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.58
KOG0194|consensus	474		99.58
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.58
KOG1035|consensus	1351		99.58
KOG0610|consensus	459		99.58
PHA03209	357	serine/threonine kinase US3; Provisional	99.57
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.57
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.57
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.57
KOG0607|consensus	463		99.57
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.57
KOG1989|consensus	738		99.57
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.57
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.57
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.57
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.57
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.56
PRK09188	365	serine/threonine protein kinase; Provisional	99.56
PHA02988	283	hypothetical protein; Provisional	99.56
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.56
PHA03212	391	serine/threonine kinase US3; Provisional	99.55
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.55
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.55
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.55
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.55
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.55
KOG0596|consensus	677		99.55
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.55
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.54
KOG0597|consensus	808		99.54
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.54
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.54
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.54
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.54
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.54
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.54
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.54
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.53
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.53
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.53
KOG1095|consensus	1025		99.53
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.53
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.53
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.53
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.53
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.53
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.53
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.53
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.53
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.53
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.53
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.53
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.53
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.53
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.52
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.52
KOG0584|consensus	632		99.52
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.52
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.52
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.52
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.52
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.52
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.52
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.52
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.52
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.52
KOG0579|consensus	1187		99.52
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.51
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.51
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.51
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.51
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.51
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.51
KOG0668|consensus	338		99.51
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.51
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.51
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.51
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.51
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.51
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.51
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.51
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.51
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.51
KOG1094|consensus	807		99.51
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.5
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.5
PHA03207	392	serine/threonine kinase US3; Provisional	99.5
PTZ00284	467	protein kinase; Provisional	99.5
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.5
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.5
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.5
KOG0603|consensus	612		99.5
KOG0201|consensus	467		99.5
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.5
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.5
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.5
PHA03211	461	serine/threonine kinase US3; Provisional	99.5
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.5
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.5
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.49
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.49
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.49
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.49
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.49
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.49
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.49
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.49
KOG3653|consensus	534		99.49
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.49
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.49
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.49
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.49
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.49
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.49
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.49
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.49
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.49
KOG0193|consensus	678		99.49
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.48
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.48
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.48
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.48
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.48
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.48
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.48
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.48
KOG1151|consensus	775		99.48
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.48
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.48
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.48
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.48
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.48
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.47
PHA03210	501	serine/threonine kinase US3; Provisional	99.47
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.47
KOG4279|consensus	1226		99.47
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.47
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.47
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.47
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.47
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.47
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.47
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.47
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.47
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.47
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.47
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.46
KOG0664|consensus	449		99.46
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.46
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.46
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.46
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.46
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.46
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.46
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.46
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.46
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.46
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.46
KOG4645|consensus	1509		99.46
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.46
KOG0577|consensus	948		99.46
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.46
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.46
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.46
KOG0984|consensus	282		99.45
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.45
KOG4257|consensus	974		99.45
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.45
KOG1345|consensus	378		99.45
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.45
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.45
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.45
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.45
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.45
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.45
KOG0665|consensus	369		99.45
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.45
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.45
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.44
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.44
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.44
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.44
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.44
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.44
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.44
PLN00181	793	protein SPA1-RELATED; Provisional	99.44
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.44
KOG0574|consensus	502		99.44
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.43
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.43
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.43
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.43
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.43
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.43
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.43
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.43
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.43
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.43
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.43
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.43
KOG0587|consensus	953		99.43
PLN00009	294	cyclin-dependent kinase A; Provisional	99.43
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.42
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.42
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.42
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.42
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.42
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.42
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.42
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.42
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.42
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.42
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.42
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.41
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.41
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.41
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.41
KOG2052|consensus	513		99.41
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.41
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.4
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.4
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.4
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.4
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.4
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.4
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.4
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.39
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.39
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.39
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.39
KOG0671|consensus	415		99.39
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.39
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.38
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.38
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.38
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.38
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.38
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.38
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.38
PRK12274	218	serine/threonine protein kinase; Provisional	99.38
PHA02882	294	putative serine/threonine kinase; Provisional	99.37
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.37
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.37
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.37
KOG1152|consensus	772		99.37
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.36
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.36
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.36
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.36
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.35
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.35
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.35
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.35
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.34
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.34
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.34
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.34
KOG2345|consensus	302		99.33
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.32
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.31
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.31
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.31
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.31
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.31
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.3
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.3
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.29
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.29
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.29
KOG0200|consensus	609		99.29
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.29
KOG4278|consensus	1157		99.29
KOG0670|consensus	752		99.29
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.29
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.27
smart00090	237	RIO RIO-like kinase.	99.27
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.27
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.26
KOG1027|consensus	903		99.25
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.25
PRK14879	211	serine/threonine protein kinase; Provisional	99.22
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.21
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.21
KOG1163|consensus	341		99.19
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.19
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.17
KOG0576|consensus	829		99.17
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.16
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.16
KOG0199|consensus	1039		99.16
KOG1167|consensus	418		99.11
PRK10345	210	hypothetical protein; Provisional	99.07
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.07
KOG1164|consensus	322		99.07
KOG1006|consensus	361		99.06
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.04
KOG0590|consensus	601		99.03
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.01
KOG0983|consensus	391		99.0
KOG1025|consensus	1177		98.98
KOG1290|consensus	590		98.86
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.8
KOG1166|consensus	974		98.79
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.76
KOG1165|consensus	449		98.76
KOG0603|consensus	612		98.74
KOG4158|consensus	598		98.73
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.72
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.7
KOG1033|consensus	516		98.61
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.58
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.52
KOG1024|consensus	563		98.51
KOG3087|consensus	229		98.48
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.47
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.42
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.35
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.21
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.17
KOG0590|consensus	601		97.91
KOG1023|consensus	484		97.89
KOG1266|consensus	458		97.87
KOG1240|consensus	1431		97.81
KOG0606|consensus	1205		97.76
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.47
PRK09902	216	hypothetical protein; Provisional	97.41
KOG1235|consensus	538		97.39
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.3
KOG3741|consensus	655		96.98
COG0661	517	AarF Predicted unusual protein kinase [General fun	96.8
KOG2268|consensus	465		96.3
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	96.07
KOG1243|consensus	690		95.96
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	95.03
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	94.98
KOG0601|consensus	524		94.7
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	94.64
KOG0606|consensus	1205		94.4
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	93.93
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	92.95
KOG0601|consensus	524		92.9
KOG0195|consensus	448		90.13
COG4248	637	Uncharacterized protein with protein kinase and he	90.0
PRK05231	319	homoserine kinase; Provisional	87.52
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	86.65
PF01636	239	APH: Phosphotransferase enzyme family This family	84.76
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	83.11
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	82.9
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	81.8
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	81.32
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	80.84

>KOG0615|consensus

Probab=99.92  E-value=3.7e-25  Score=142.05  Aligned_cols=92  Identities=28%  Similarity=0.428  Sum_probs=80.5

Q ss_pred             CCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +..||||||++||+|++++-.++         ++.|++.++.|||++||+|||+||+|+++........+|+.|||+|+.
T Consensus       249 ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~  328 (475)
T KOG0615|consen  249 DSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV  328 (475)
T ss_pred             CceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence            45699999999999999886543         889999999999999999999999999996444557899999999998


Q ss_pred             CCCCCCccceeeccceecccc
Q psy14897         78 VPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .....-..++|||..|.+||+
T Consensus       329 ~g~~sfm~TlCGTpsYvAPEV  349 (475)
T KOG0615|consen  329 SGEGSFMKTLCGTPSYVAPEV  349 (475)
T ss_pred             cccceehhhhcCCccccChhh
Confidence            876665678899999999985

>KOG0595|consensus

Probab=99.91  E-value=2.7e-24  Score=137.65  Aligned_cols=94  Identities=23%  Similarity=0.377  Sum_probs=83.0

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCC---CeEEEeec
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRG---NLVYIIDF   72 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~---~~~~l~d~   72 (99)
                      .++.+|+||||++||||..+++.++         ++.|++.|+.+||+++|+|||+||+|+++......   ..+|++||
T Consensus        80 ~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADF  159 (429)
T KOG0595|consen   80 DDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADF  159 (429)
T ss_pred             cCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEeccc
Confidence            4568999999999999999998653         88999999999999999999999999999643222   67899999


Q ss_pred             cceecCCCCCCccceeeccceecccc
Q psy14897         73 GLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |+|+.+.+..--.+.||+.-|.+||+
T Consensus       160 GfAR~L~~~~~a~tlcGSplYMAPEV  185 (429)
T KOG0595|consen  160 GFARFLQPGSMAETLCGSPLYMAPEV  185 (429)
T ss_pred             chhhhCCchhHHHHhhCCccccCHHH
Confidence            99999988877788999999999986

>KOG0661|consensus

Probab=99.88  E-value=1.9e-23  Score=136.02  Aligned_cols=87  Identities=29%  Similarity=0.474  Sum_probs=79.3

Q ss_pred             CeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          8 QSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      .+++|||||+. +|.+.++.+.          ++.||+.||.|+|.+|+.|||+||+|+++.   ....+|++|||+||.
T Consensus        84 ~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~---~~~~iKiaDFGLARe  159 (538)
T KOG0661|consen   84 ILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS---GNDVIKIADFGLARE  159 (538)
T ss_pred             eEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec---ccceeEecccccccc
Confidence            79999999987 8888877543          899999999999999999999999999993   356799999999999


Q ss_pred             CCCCCCccceeeccceecccc
Q psy14897         78 VPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +...+.|+.-+.|+||++||+
T Consensus       160 v~SkpPYTeYVSTRWYRAPEv  180 (538)
T KOG0661|consen  160 VRSKPPYTEYVSTRWYRAPEV  180 (538)
T ss_pred             cccCCCcchhhhcccccchHH
Confidence            999999999999999999996

>KOG0600|consensus

Probab=99.88  E-value=9.3e-23  Score=133.56  Aligned_cols=89  Identities=31%  Similarity=0.434  Sum_probs=77.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+.+|||||||++ ||.-.+...          -++.|++.|+.|||++++.|||+|..|+++   ++...+|++|||+|
T Consensus       190 ~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGLA  265 (560)
T KOG0600|consen  190 SGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---DNNGVLKIADFGLA  265 (560)
T ss_pred             CceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---cCCCCEEeccccce
Confidence            4679999999998 776666532          288999999999999999999999999999   47777999999999


Q ss_pred             ecCCCCC--Cccceeeccceecccc
Q psy14897         76 KNVPSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      +.+....  .++..+.|.||++||+
T Consensus       266 r~y~~~~~~~~T~rVvTLWYRpPEL  290 (560)
T KOG0600|consen  266 RFYTPSGSAPYTSRVVTLWYRPPEL  290 (560)
T ss_pred             eeccCCCCcccccceEEeeccChHH
Confidence            9775543  6789999999999996

>KOG0616|consensus

Probab=99.87  E-value=2.8e-22  Score=124.70  Aligned_cols=89  Identities=26%  Similarity=0.371  Sum_probs=79.5

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +.+.++|||||+.||.|++++++.+         ++.||+.|++|+|++++++||++|+|++++   ..+.+|+.|||+|
T Consensus       115 d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD---~~G~iKitDFGFA  191 (355)
T KOG0616|consen  115 DNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLD---QNGHIKITDFGFA  191 (355)
T ss_pred             cCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeec---cCCcEEEEeccce
Confidence            4467999999999999999998632         889999999999999999999999999995   6677999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.....  .-..|||..|.+||+
T Consensus       192 K~v~~r--T~TlCGTPeYLAPEi  212 (355)
T KOG0616|consen  192 KRVSGR--TWTLCGTPEYLAPEI  212 (355)
T ss_pred             EEecCc--EEEecCCccccChHH
Confidence            988766  367899999999986

>KOG0583|consensus

Probab=99.86  E-value=7.6e-22  Score=128.00  Aligned_cols=90  Identities=26%  Similarity=0.376  Sum_probs=79.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ..+++||||+.+|+|++.+..+         .+++|++.|+.|||+++++|||+|++|++++.+  ...+|+.|||++..
T Consensus        93 ~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~--~~~~Kl~DFG~s~~  170 (370)
T KOG0583|consen   93 TKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGN--EGNLKLSDFGLSAI  170 (370)
T ss_pred             CeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCC--CCCEEEeccccccc
Confidence            4589999999999999998752         389999999999999999999999999999622  16799999999998


Q ss_pred             C-CCCCCccceeeccceecccc
Q psy14897         78 V-PSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~-~~~~~~~~~~~t~~~~~~~~   98 (99)
                      . .........|||..|.+||+
T Consensus       171 ~~~~~~~l~t~cGsp~Y~aPEv  192 (370)
T KOG0583|consen  171 SPGEDGLLKTFCGSPAYAAPEV  192 (370)
T ss_pred             cCCCCCcccCCCCCcccCCHHH
Confidence            8 46667788999999999996

>KOG0663|consensus

Probab=99.86  E-value=3.4e-22  Score=126.13  Aligned_cols=88  Identities=24%  Similarity=0.339  Sum_probs=77.0

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +.+||||||+++ ||.+.+..-          -+..|++.|++|||.+.|+|||++++|+++   ...+.+|++|||+|+
T Consensus       150 d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm---~~~G~lKiaDFGLAR  225 (419)
T KOG0663|consen  150 DKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL---SHKGILKIADFGLAR  225 (419)
T ss_pred             ceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee---ccCCcEEecccchhh
Confidence            569999999998 888877542          277999999999999999999999999999   467779999999999


Q ss_pred             cCCCC-CCccceeeccceecccc
Q psy14897         77 NVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      .+... .++++.+.|.||++||+
T Consensus       226 ~ygsp~k~~T~lVVTLWYRaPEL  248 (419)
T KOG0663|consen  226 EYGSPLKPYTPLVVTLWYRAPEL  248 (419)
T ss_pred             hhcCCcccCcceEEEeeecCHHH
Confidence            98655 46788999999999986

>KOG0598|consensus

Probab=99.86  E-value=1.2e-21  Score=124.12  Aligned_cols=90  Identities=24%  Similarity=0.342  Sum_probs=78.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+|+|+||+.||+|+..|+++.         |+.+|+.||.|||+++|+|||+||+||+++   ....+++.|||+|+
T Consensus        97 ~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd---~~GHi~LtDFgL~k  173 (357)
T KOG0598|consen   97 EEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLD---EQGHIKLTDFGLCK  173 (357)
T ss_pred             CCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeec---CCCcEEEeccccch
Confidence            367999999999999999998543         789999999999999999999999999994   66779999999999


Q ss_pred             cC-CCCCCccceeeccceecccc
Q psy14897         77 NV-PSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~-~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .. ........+|||..|.+||+
T Consensus       174 ~~~~~~~~t~tfcGT~eYmAPEi  196 (357)
T KOG0598|consen  174 EDLKDGDATRTFCGTPEYMAPEI  196 (357)
T ss_pred             hcccCCCccccccCCccccChHH
Confidence            64 44445566899999999986

>KOG0593|consensus

Probab=99.86  E-value=3.9e-22  Score=124.66  Aligned_cols=90  Identities=31%  Similarity=0.453  Sum_probs=76.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhc---------cchHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIS---------TGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~---------~~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...+++||||+++.-|.+.-+         -++++.|++.++.|||+++++|||++|+|+++.   ....+|+.|||+|+
T Consensus        73 krklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit---~~gvvKLCDFGFAR  149 (396)
T KOG0593|consen   73 KRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT---QNGVVKLCDFGFAR  149 (396)
T ss_pred             cceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe---cCCcEEeccchhhH
Confidence            357899999999865554322         134899999999999999999999999999995   55669999999999


Q ss_pred             cCC-CCCCccceeeccceecccc
Q psy14897         77 NVP-SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~-~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+. +...|+.-+.|.||++||+
T Consensus       150 ~L~~pgd~YTDYVATRWYRaPEL  172 (396)
T KOG0593|consen  150 TLSAPGDNYTDYVATRWYRAPEL  172 (396)
T ss_pred             hhcCCcchhhhhhhhhhccChhh
Confidence            998 6778888899999999996

>KOG0581|consensus

Probab=99.86  E-value=4.6e-22  Score=126.12  Aligned_cols=86  Identities=29%  Similarity=0.444  Sum_probs=76.1

Q ss_pred             CeEEEEEeeCCCCchhhhcc---------chHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          8 QSCLVFPYSYGTKSGEQIST---------GKEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~---------~~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      .+.++||||++|+|++.++.         .+++.+++.||.|||. .+|+|||+||.|+++   .....+|++|||.+..
T Consensus       152 ~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv---NskGeVKicDFGVS~~  228 (364)
T KOG0581|consen  152 EISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV---NSKGEVKICDFGVSGI  228 (364)
T ss_pred             eEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee---ccCCCEEeccccccHH
Confidence            48999999999999999884         2378999999999995 899999999999999   4566799999999998


Q ss_pred             CCCCCCccceeeccceeccc
Q psy14897         78 VPSSPSYERHVTTQTTRIGR   97 (99)
Q Consensus        78 ~~~~~~~~~~~~t~~~~~~~   97 (99)
                      +.+. ...+++||..|.+||
T Consensus       229 lvnS-~a~tfvGT~~YMsPE  247 (364)
T KOG0581|consen  229 LVNS-IANTFVGTSAYMSPE  247 (364)
T ss_pred             hhhh-hcccccccccccChh
Confidence            8766 447789999999998

>KOG0592|consensus

Probab=99.85  E-value=1.9e-21  Score=128.37  Aligned_cols=90  Identities=27%  Similarity=0.396  Sum_probs=77.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc---------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST---------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~---------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...+|+|+||..+|+|.+.|+.         +-++.||+.++.|||++||||||+||+|+|++   ....+++.|||.|+
T Consensus       146 ~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd---~dmhikITDFGsAK  222 (604)
T KOG0592|consen  146 EESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLD---KDGHIKITDFGSAK  222 (604)
T ss_pred             ccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEc---CCCcEEEeeccccc
Confidence            3579999999999999999975         33889999999999999999999999999994   67789999999999


Q ss_pred             cCCCCCC--------------ccceeeccceecccc
Q psy14897         77 NVPSSPS--------------YERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~--------------~~~~~~t~~~~~~~~   98 (99)
                      .+.+...              ...++||..|.+||+
T Consensus       223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPEl  258 (604)
T KOG0592|consen  223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPEL  258 (604)
T ss_pred             cCChhhccccCccCcccccCcccceeeeecccCHHH
Confidence            8754321              155899999999985

>KOG0594|consensus

Probab=99.84  E-value=5.5e-21  Score=120.51  Aligned_cols=88  Identities=25%  Similarity=0.456  Sum_probs=75.9

Q ss_pred             CCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      +.+++||||++. ||..++..             +.++.|++.|+.|||+++|+|||+||+|+++.   ....+|++|||
T Consensus        90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~---~~G~lKlaDFG  165 (323)
T KOG0594|consen   90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLIS---SSGVLKLADFG  165 (323)
T ss_pred             ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEEC---CCCcEeeeccc
Confidence            478899999987 77776643             23789999999999999999999999999994   56778999999


Q ss_pred             ceecCC-CCCCccceeeccceecccc
Q psy14897         74 LAKNVP-SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~-~~~~~~~~~~t~~~~~~~~   98 (99)
                      +|+.+. +...+++.++|.||++||+
T Consensus       166 lAra~~ip~~~yt~evvTlWYRaPEv  191 (323)
T KOG0594|consen  166 LARAFSIPMRTYTPEVVTLWYRAPEV  191 (323)
T ss_pred             hHHHhcCCcccccccEEEeeccCHHH
Confidence            999876 5666888999999999985

>KOG0611|consensus

Probab=99.83  E-value=6.4e-21  Score=123.52  Aligned_cols=89  Identities=24%  Similarity=0.366  Sum_probs=80.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +.+.+||||..+|+|.+++.++         .+++||++++.|||.++++|||++.+||+++   ....+|++|||++..
T Consensus       126 dKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD---~N~NiKIADFGLSNl  202 (668)
T KOG0611|consen  126 DKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLD---QNNNIKIADFGLSNL  202 (668)
T ss_pred             ceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeec---CCCCeeeeccchhhh
Confidence            5799999999999999999753         3999999999999999999999999999996   334599999999998


Q ss_pred             CCCCCCccceeeccceecccc
Q psy14897         78 VPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +....-.+++||+.-|++|||
T Consensus       203 y~~~kfLqTFCGSPLYASPEI  223 (668)
T KOG0611|consen  203 YADKKFLQTFCGSPLYASPEI  223 (668)
T ss_pred             hccccHHHHhcCCcccCCccc
Confidence            887777788999999999987

>KOG0659|consensus

Probab=99.82  E-value=2.9e-20  Score=114.40  Aligned_cols=89  Identities=27%  Similarity=0.357  Sum_probs=76.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+.+.+|+||++. ||...++.+.          |+.+++.|+.|||++.+.|||+||.|+++.   ....+|++|||++
T Consensus        73 ~~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis---~~g~lKiADFGLA  148 (318)
T KOG0659|consen   73 KSNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLIS---SDGQLKIADFGLA  148 (318)
T ss_pred             CCceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEc---CCCcEEeecccch
Confidence            3678999999987 8888887643          889999999999999999999999999994   5667999999999


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +.+.+.. .+...+.|.||++||+
T Consensus       149 r~f~~p~~~~~~~V~TRWYRAPEL  172 (318)
T KOG0659|consen  149 RFFGSPNRIQTHQVVTRWYRAPEL  172 (318)
T ss_pred             hccCCCCcccccceeeeeccChHH
Confidence            9986543 4455689999999996

>KOG0575|consensus

Probab=99.82  E-value=4.1e-20  Score=123.05  Aligned_cols=91  Identities=24%  Similarity=0.282  Sum_probs=80.7

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +.+++|||.|++.+++|...++.++         +.+||+.|+.|||+.+|+|||++..|+++.   ....+|+.|||+|
T Consensus        89 Ds~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~---~~~~VKIgDFGLA  165 (592)
T KOG0575|consen   89 DSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLN---ENMNVKIGDFGLA  165 (592)
T ss_pred             cCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeec---CcCcEEeccccee
Confidence            4568999999999999999998544         889999999999999999999999999994   5556999999999


Q ss_pred             ecCCCC-CCccceeeccceecccc
Q psy14897         76 KNVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      ..+... ....+.|||.-|.+||+
T Consensus       166 t~le~~~Erk~TlCGTPNYIAPEV  189 (592)
T KOG0575|consen  166 TQLEYDGERKKTLCGTPNYIAPEV  189 (592)
T ss_pred             eeecCcccccceecCCCcccChhH
Confidence            988644 66688899999999996

>KOG0578|consensus

Probab=99.80  E-value=1.9e-19  Score=119.15  Aligned_cols=89  Identities=25%  Similarity=0.391  Sum_probs=76.9

Q ss_pred             CCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      +++|+|||||+||+|-+.+...        .++++++.||.|||.++|+|||++..|+++.   ....+|+.|||+|..+
T Consensus       343 deLWVVMEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~---~~g~vKltDFGFcaqi  419 (550)
T KOG0578|consen  343 DELWVVMEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT---MDGSVKLTDFGFCAQI  419 (550)
T ss_pred             ceeEEEEeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec---cCCcEEEeeeeeeecc
Confidence            7899999999999998887643        2789999999999999999999999999995   4555999999999988


Q ss_pred             CCCC-Cccceeeccceecccc
Q psy14897         79 PSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      .... +....+||..|.+||.
T Consensus       420 ~~~~~KR~TmVGTPYWMAPEV  440 (550)
T KOG0578|consen  420 SEEQSKRSTMVGTPYWMAPEV  440 (550)
T ss_pred             ccccCccccccCCCCccchhh
Confidence            6554 6677789999999884

>KOG0694|consensus

Probab=99.80  E-value=1.3e-19  Score=122.15  Aligned_cols=90  Identities=24%  Similarity=0.298  Sum_probs=76.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      .+.+|+||||+.|||+.-+....        -|+..++.||.|||+++|++||+|.+|++++   ..+.+|++|||+|+.
T Consensus       441 ~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD---~eGh~kiADFGlcKe  517 (694)
T KOG0694|consen  441 KEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLD---TEGHVKIADFGLCKE  517 (694)
T ss_pred             CCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEc---ccCcEEecccccccc
Confidence            36799999999999955444322        2789999999999999999999999999994   667799999999998


Q ss_pred             CC-CCCCccceeeccceecccc
Q psy14897         78 VP-SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~-~~~~~~~~~~t~~~~~~~~   98 (99)
                      -. .+....++|||..|.+||+
T Consensus       518 ~m~~g~~TsTfCGTpey~aPEi  539 (694)
T KOG0694|consen  518 GMGQGDRTSTFCGTPEFLAPEV  539 (694)
T ss_pred             cCCCCCccccccCChhhcChhh
Confidence            54 5566688999999999997

>KOG0599|consensus

Probab=99.80  E-value=3.9e-20  Score=114.85  Aligned_cols=89  Identities=24%  Similarity=0.365  Sum_probs=80.9

Q ss_pred             CCeEEEEEeeCCCCchhhhcc---------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST---------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~---------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      .-+++|||.+..|.|+++|.+         +++++|+..++.|+|.++|+|||++++||+.+   ....++++|||++..
T Consensus        96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILld---dn~~i~isDFGFa~~  172 (411)
T KOG0599|consen   96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLD---DNMNIKISDFGFACQ  172 (411)
T ss_pred             chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeec---cccceEEeccceeec
Confidence            457899999999999999964         45999999999999999999999999999995   445699999999999


Q ss_pred             CCCCCCccceeeccceecccc
Q psy14897         78 VPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.++.+....|||.+|.+||+
T Consensus       173 l~~GekLrelCGTPgYLAPEt  193 (411)
T KOG0599|consen  173 LEPGEKLRELCGTPGYLAPET  193 (411)
T ss_pred             cCCchhHHHhcCCCcccChhh
Confidence            999999999999999999985

>KOG0690|consensus

Probab=99.78  E-value=2.2e-19  Score=113.86  Aligned_cols=90  Identities=26%  Similarity=0.455  Sum_probs=79.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+|+||||..||.|+-.|...+         +...|++++.|||+++|+.||++.+|+++   ++...+|+.|||+|+
T Consensus       240 ~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDFGLCK  316 (516)
T KOG0690|consen  240 QDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDFGLCK  316 (516)
T ss_pred             CceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeecccch
Confidence            467999999999999998886543         67889999999999999999999999999   477789999999998


Q ss_pred             c-CCCCCCccceeeccceecccc
Q psy14897         77 N-VPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~-~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      . +..+.....+|||..|.+||.
T Consensus       317 E~I~~g~t~kTFCGTPEYLAPEV  339 (516)
T KOG0690|consen  317 EEIKYGDTTKTFCGTPEYLAPEV  339 (516)
T ss_pred             hcccccceeccccCChhhcCchh
Confidence            7 566677788999999999985

>KOG0588|consensus

Probab=99.78  E-value=3e-19  Score=120.43  Aligned_cols=90  Identities=26%  Similarity=0.345  Sum_probs=79.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ..++|+|.||+.+|.|++++-.+         +++.||+.|+.|||+.+|+|||++++|++++   ....+|++|||.|.
T Consensus        84 ~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd---~~~nIKIADFGMAs  160 (786)
T KOG0588|consen   84 KQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLD---VKNNIKIADFGMAS  160 (786)
T ss_pred             CceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhh---cccCEeeeccceee
Confidence            35799999999999999988543         3899999999999999999999999999996   33449999999999


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .-.++.-..+.||+.-|+.|||
T Consensus       161 Le~~gklLeTSCGSPHYA~PEI  182 (786)
T KOG0588|consen  161 LEVPGKLLETSCGSPHYAAPEI  182 (786)
T ss_pred             cccCCccccccCCCcccCCchh
Confidence            8777777788899999999997

>KOG0604|consensus

Probab=99.78  E-value=3.2e-19  Score=111.70  Aligned_cols=92  Identities=22%  Similarity=0.242  Sum_probs=78.3

Q ss_pred             CCeEEEEEeeCCCCchhhhccch-----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK-----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~-----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ..+.+|||.|+||+|++.++.+.           +.+||..++.|||+.+|.|||+|++|++.........+|+.|||+|
T Consensus       132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA  211 (400)
T KOG0604|consen  132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA  211 (400)
T ss_pred             eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence            56889999999999999997543           7899999999999999999999999999876566677999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.........+-|-|..|.+||.
T Consensus       212 K~t~~~~~L~TPc~TPyYvaPev  234 (400)
T KOG0604|consen  212 KETQEPGDLMTPCFTPYYVAPEV  234 (400)
T ss_pred             cccCCCccccCCcccccccCHHH
Confidence            98765555566677888888763

>KOG0612|consensus

Probab=99.77  E-value=5.3e-19  Score=124.37  Aligned_cols=90  Identities=26%  Similarity=0.327  Sum_probs=77.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +..+|+|||||.||||...+....         |...|+.|+.-+|+.|++|||++|.|++++   ..+.++++|||.|-
T Consensus       147 ~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld---~~GHikLADFGsCl  223 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLD---KSGHIKLADFGSCL  223 (1317)
T ss_pred             ccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEec---ccCcEeeccchhHH
Confidence            357999999999999999887533         668899999999999999999999999995   66779999999998


Q ss_pred             cCCCCC--Cccceeeccceecccc
Q psy14897         77 NVPSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      .+...+  .+...+||+.|.+||+
T Consensus       224 km~~dG~V~s~~aVGTPDYISPEv  247 (1317)
T KOG0612|consen  224 KMDADGTVRSSVAVGTPDYISPEV  247 (1317)
T ss_pred             hcCCCCcEEeccccCCCCccCHHH
Confidence            886443  4466689999999986

>KOG0192|consensus

Probab=99.76  E-value=2e-18  Score=111.72  Aligned_cols=88  Identities=26%  Similarity=0.377  Sum_probs=73.5

Q ss_pred             CeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCC-eeecCcCCCcEEEeeCCCC-CeEEEeeccc
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRN-FIHRDIKPDNFLMGLGKRG-NLVYIIDFGL   74 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~-i~h~~l~~~~~l~~~~~~~-~~~~l~d~g~   74 (99)
                      .+++||||+.+|+|..++...           +++.+|+.|+.|||+++ ++|+|+|+.|+++.   .. ..+|++|||+
T Consensus       114 ~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~---~~~~~~KI~DFGl  190 (362)
T KOG0192|consen  114 SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVD---LKGKTLKIADFGL  190 (362)
T ss_pred             ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEc---CCCCEEEECCCcc
Confidence            589999999999999999651           17899999999999999 99999999999995   44 4899999999


Q ss_pred             eecCCCC-CCccceeeccceecccc
Q psy14897         75 AKNVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      ++..... .......||..|.+||+
T Consensus       191 sr~~~~~~~~~~~~~GT~~wMAPEv  215 (362)
T KOG0192|consen  191 SREKVISKTSMTSVAGTYRWMAPEV  215 (362)
T ss_pred             ceeeccccccccCCCCCccccChhh
Confidence            9886543 23333678888889885

>KOG0660|consensus

Probab=99.76  E-value=4.2e-19  Score=112.50  Aligned_cols=88  Identities=30%  Similarity=0.372  Sum_probs=73.7

Q ss_pred             CCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +.+|+|+|+|+. ||...++.++         +..|++.|++|+|+.+++|||+||.|+++.   ....+|+.|||+|+.
T Consensus        99 ~DvYiV~elMet-DL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n---~~c~lKI~DFGLAR~  174 (359)
T KOG0660|consen   99 NDVYLVFELMET-DLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLN---ADCDLKICDFGLARY  174 (359)
T ss_pred             ceeEEehhHHhh-HHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeec---cCCCEEeccccceee
Confidence            568999999954 9999988654         679999999999999999999999999993   555679999999998


Q ss_pred             CCCC---CCccceeeccceecccc
Q psy14897         78 VPSS---PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~---~~~~~~~~t~~~~~~~~   98 (99)
                      ....   .-.+.-+.|.||++||+
T Consensus       175 ~~~~~~~~~mTeYVaTRWYRAPEl  198 (359)
T KOG0660|consen  175 LDKFFEDGFMTEYVATRWYRAPEL  198 (359)
T ss_pred             ccccCcccchhcceeeeeecCHHH
Confidence            8542   22244578999999996

>KOG0197|consensus

Probab=99.76  E-value=2.2e-18  Score=113.16  Aligned_cols=70  Identities=27%  Similarity=0.394  Sum_probs=62.6

Q ss_pred             CCeEEEEEeeCCCCchhhhccch-----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK-----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~-----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +.++||||||..|+|.++|+...           ++.||+.|+.||+++++||||+.+.|||++   ....+|++|||+|
T Consensus       274 ~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~---~~~~vKIsDFGLA  350 (468)
T KOG0197|consen  274 EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVD---EDLVVKISDFGLA  350 (468)
T ss_pred             CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeec---cCceEEEcccccc
Confidence            46899999999999999998621           789999999999999999999999999995   5667999999999


Q ss_pred             ecCC
Q psy14897         76 KNVP   79 (99)
Q Consensus        76 ~~~~   79 (99)
                      +.+.
T Consensus       351 r~~~  354 (468)
T KOG0197|consen  351 RLIG  354 (468)
T ss_pred             cccC
Confidence            9443

>KOG0033|consensus

Probab=99.75  E-value=3.1e-18  Score=105.07  Aligned_cols=92  Identities=27%  Similarity=0.413  Sum_probs=79.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      .-.|+|||+|.|++|..-+-.+         .+.+|++.++.|||.++|+|||++|.|+++..-.++..+|+.+||++..
T Consensus        83 ~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~  162 (355)
T KOG0033|consen   83 SFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIE  162 (355)
T ss_pred             ceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEE
Confidence            4579999999999997655432         2779999999999999999999999999998666777899999999999


Q ss_pred             CCCCCCccceeeccceecccc
Q psy14897         78 VPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +..+..-..++||..|.+||+
T Consensus       163 l~~g~~~~G~~GtP~fmaPEv  183 (355)
T KOG0033|consen  163 VNDGEAWHGFAGTPGYLSPEV  183 (355)
T ss_pred             eCCccccccccCCCcccCHHH
Confidence            986666677889999999985

>KOG0585|consensus

Probab=99.75  E-value=2.3e-18  Score=112.86  Aligned_cols=92  Identities=29%  Similarity=0.418  Sum_probs=74.8

Q ss_pred             CCCCCeEEEEEeeCCCCchh---------hhccchHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          4 FRSTQSCLVFPYSYGTKSGE---------QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         4 ~~~~~~~~v~e~~~~g~l~~---------~l~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      -..+.+|||+||+..|.+..         ...++++++.++.||.|||.++|+|||+||.|+++.   ....+|++|||.
T Consensus       180 P~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~---~~g~VKIsDFGV  256 (576)
T KOG0585|consen  180 PESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLS---SDGTVKISDFGV  256 (576)
T ss_pred             cccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEc---CCCcEEeeccce
Confidence            34578999999999986643         334567999999999999999999999999999995   557799999999


Q ss_pred             eecCC------CCCCccceeeccceecccc
Q psy14897         75 AKNVP------SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~------~~~~~~~~~~t~~~~~~~~   98 (99)
                      +..+.      ........+||.++.+||+
T Consensus       257 s~~~~~~~~~~~d~~L~~tvGTPAF~APE~  286 (576)
T KOG0585|consen  257 SNEFPQGSDEGSDDQLSRTVGTPAFFAPEL  286 (576)
T ss_pred             eeecccCCccccHHHHhhcCCCccccchHh
Confidence            98772      2233355688999988885

>KOG0696|consensus

Probab=99.75  E-value=3.4e-18  Score=111.28  Aligned_cols=89  Identities=22%  Similarity=0.260  Sum_probs=77.8

Q ss_pred             CCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +.+|+||||+.||+|...++.-.         ++.+|+.||-|||+++|+.||++..|++++   ....+|+.|||.+++
T Consensus       423 DRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd---~eGHiKi~DFGmcKE  499 (683)
T KOG0696|consen  423 DRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---SEGHIKIADFGMCKE  499 (683)
T ss_pred             hheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEec---cCCceEeeecccccc
Confidence            57899999999999998887532         789999999999999999999999999994   677799999999988


Q ss_pred             C-CCCCCccceeeccceecccc
Q psy14897         78 V-PSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~-~~~~~~~~~~~t~~~~~~~~   98 (99)
                      - -......++|||..|.+|||
T Consensus       500 ni~~~~TTkTFCGTPdYiAPEI  521 (683)
T KOG0696|consen  500 NIFDGVTTKTFCGTPDYIAPEI  521 (683)
T ss_pred             cccCCcceeeecCCCcccccce
Confidence            4 44455678899999999997

>KOG0658|consensus

Probab=99.74  E-value=1e-18  Score=110.91  Aligned_cols=88  Identities=25%  Similarity=0.316  Sum_probs=75.8

Q ss_pred             CeEEEEEeeCCCCchhhhcc-----c--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          8 QSCLVFPYSYGTKSGEQIST-----G--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~-----~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+.+|||||.. +|.+.++.     .        -+.-|+..|+.|||+.+|+|||+||.|++++  .....+|++|||.
T Consensus        96 ~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD--~~tg~LKicDFGS  172 (364)
T KOG0658|consen   96 YLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD--PDTGVLKICDFGS  172 (364)
T ss_pred             HHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc--CCCCeEEeccCCc
Confidence            45689999987 78777763     1        2789999999999999999999999999996  6678899999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |+.+..+.+..+-..|+-|++||+
T Consensus       173 AK~L~~~epniSYicSRyYRaPEL  196 (364)
T KOG0658|consen  173 AKVLVKGEPNISYICSRYYRAPEL  196 (364)
T ss_pred             ceeeccCCCceeEEEeccccCHHH
Confidence            999987766666778999999996

>KOG0586|consensus

Probab=99.74  E-value=4.4e-18  Score=113.57  Aligned_cols=90  Identities=21%  Similarity=0.366  Sum_probs=81.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc---------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST---------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~---------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...+|+||||..+|++++++..         +.++.|++.++.|||+++++|+|++++|+++.   ....++++|||++.
T Consensus       127 ~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~---~~mnikIaDfgfS~  203 (596)
T KOG0586|consen  127 EATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLD---ENMNIKIADFGFST  203 (596)
T ss_pred             cceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccc---cccceeeeccccce
Confidence            4679999999999999999864         33889999999999999999999999999994   55559999999999


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+.........||++.|++||+
T Consensus       204 ~~~~~~~lqt~cgsppyAaPEl  225 (596)
T KOG0586|consen  204 FFDYGLMLQTFCGSPPYAAPEL  225 (596)
T ss_pred             eecccccccccCCCCCccChHh
Confidence            9988888889999999999997

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.73  E-value=1.2e-17  Score=106.42  Aligned_cols=90  Identities=23%  Similarity=0.407  Sum_probs=73.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+....         ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++
T Consensus        67 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~---~~~~~kl~DfG~a~  143 (323)
T cd05571          67 HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLD---KDGHIKITDFGLCK  143 (323)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEeeCCCCc
Confidence            456899999999999988875432         678999999999999999999999999994   45569999999987


Q ss_pred             cCCC-CCCccceeeccceecccc
Q psy14897         77 NVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      .... .......++|..|.+||+
T Consensus       144 ~~~~~~~~~~~~~gt~~y~aPE~  166 (323)
T cd05571         144 EGISDGATMKTFCGTPEYLAPEV  166 (323)
T ss_pred             ccccCCCcccceecCccccChhh
Confidence            6432 223345678889999985

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0589|consensus

Probab=99.73  E-value=3.3e-18  Score=111.67  Aligned_cols=91  Identities=26%  Similarity=0.352  Sum_probs=78.4

Q ss_pred             CCCC-eEEEEEeeCCCCchhhhccch-----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          5 RSTQ-SCLVFPYSYGTKSGEQISTGK-----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         5 ~~~~-~~~v~e~~~~g~l~~~l~~~~-----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      .++. +++||+|++||++.+.++..+           |+.|++.++.|||++.+.|||+++.|+++.   +...+++.||
T Consensus        74 ~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt---k~~~VkLgDf  150 (426)
T KOG0589|consen   74 EDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT---KDKKVKLGDF  150 (426)
T ss_pred             cCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc---ccCceeecch
Confidence            3455 899999999999999887543           889999999999999999999999999994   5666899999


Q ss_pred             cceecCCCCC-Cccceeeccceecccc
Q psy14897         73 GLAKNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      |+|+.+.+.. .-.+.+||.-|..||+
T Consensus       151 GlaK~l~~~~~~a~tvvGTp~YmcPEi  177 (426)
T KOG0589|consen  151 GLAKILNPEDSLASTVVGTPYYMCPEI  177 (426)
T ss_pred             hhhhhcCCchhhhheecCCCcccCHHH
Confidence            9999988776 3466789999988886

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.73  E-value=1e-17  Score=108.31  Aligned_cols=70  Identities=33%  Similarity=0.452  Sum_probs=60.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...+++||||+.+|+|.+.+..+.         ++.|++.++.|+|+++++|+|++++|+++.   ....+++.|||+++
T Consensus        73 ~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~---~~~~vkL~DFGla~  149 (363)
T cd05628          73 KLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD---SKGHVKLSDFGLCT  149 (363)
T ss_pred             CCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCCEEEeeccCcc
Confidence            356899999999999999886432         789999999999999999999999999994   45569999999987


Q ss_pred             cC
Q psy14897         77 NV   78 (99)
Q Consensus        77 ~~   78 (99)
                      .+
T Consensus       150 ~~  151 (363)
T cd05628         150 GL  151 (363)
T ss_pred             cc
Confidence            54

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.72  E-value=1.8e-17  Score=107.63  Aligned_cols=90  Identities=26%  Similarity=0.348  Sum_probs=73.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ++..++||||+.+|+|.+.+....        ++.|++.++.|+|+++++|+|++++|+++.   ....++++|||++..
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~---~~~~~kL~DFG~a~~  191 (370)
T cd05621         115 DKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD---KHGHLKLADFGTCMK  191 (370)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCCEEEEeccccee
Confidence            456899999999999999886432        678999999999999999999999999994   556699999999987


Q ss_pred             CCCCC--Cccceeeccceecccc
Q psy14897         78 VPSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      +....  .....++|..|.+||+
T Consensus       192 ~~~~~~~~~~~~~gt~~Y~aPE~  214 (370)
T cd05621         192 MDETGMVRCDTAVGTPDYISPEV  214 (370)
T ss_pred             cccCCceecccCCCCcccCCHHH
Confidence            64332  1234568888999884

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.72  E-value=2.7e-17  Score=105.19  Aligned_cols=90  Identities=23%  Similarity=0.397  Sum_probs=72.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+|+|...+...         .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||+++
T Consensus        67 ~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~---~~~~~kL~DfG~~~  143 (328)
T cd05593          67 KDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLD---KDGHIKITDFGLCK  143 (328)
T ss_pred             CCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEEC---CCCcEEEecCcCCc
Confidence            45689999999999998877543         2779999999999999999999999999994   45669999999987


Q ss_pred             cCCC-CCCccceeeccceecccc
Q psy14897         77 NVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      .... .......++|..|.+||+
T Consensus       144 ~~~~~~~~~~~~~gt~~y~aPE~  166 (328)
T cd05593         144 EGITDAATMKTFCGTPEYLAPEV  166 (328)
T ss_pred             cCCCcccccccccCCcCccChhh
Confidence            6432 222334568888888885

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.71  E-value=3.3e-17  Score=104.47  Aligned_cols=90  Identities=22%  Similarity=0.236  Sum_probs=72.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|.+.+...         .++.|++.++.|+|+++++|+|++++|+++.   ....+++.|||++.
T Consensus        73 ~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~~~  149 (324)
T cd05587          73 MDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---AEGHIKIADFGMCK  149 (324)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEc---CCCCEEEeecCcce
Confidence            35689999999999998887542         2679999999999999999999999999994   45569999999987


Q ss_pred             cCCC-CCCccceeeccceecccc
Q psy14897         77 NVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      .... .......++|..|.+||+
T Consensus       150 ~~~~~~~~~~~~~gt~~y~aPE~  172 (324)
T cd05587         150 ENIFGGKTTRTFCGTPDYIAPEI  172 (324)
T ss_pred             ecCCCCCceeeecCCccccChhh
Confidence            5432 222334568888999885

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.71  E-value=4.6e-17  Score=102.12  Aligned_cols=90  Identities=22%  Similarity=0.306  Sum_probs=73.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++||||+.+|+|.+.+..           ..++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||+
T Consensus        72 ~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~---~~~~~kl~Dfg~  148 (285)
T cd05631          72 KDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLD---DRGHIRISDLGL  148 (285)
T ss_pred             CCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEeeCCC
Confidence            4568999999999999876632           12678999999999999999999999999994   455699999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +..+..........+|..|.+||+
T Consensus       149 ~~~~~~~~~~~~~~g~~~y~aPE~  172 (285)
T cd05631         149 AVQIPEGETVRGRVGTVGYMAPEV  172 (285)
T ss_pred             cEEcCCCCeecCCCCCCCccCHhh
Confidence            987655444455678888988885

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0198|consensus

Probab=99.71  E-value=4.4e-17  Score=103.51  Aligned_cols=89  Identities=28%  Similarity=0.401  Sum_probs=73.0

Q ss_pred             CeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ..++.|||+.+|+|.+.+...          .+.+|++.|+.|+|+++++|+|+|+.|+++.  .....+|++|||.+..
T Consensus        90 ~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~--~~~~~~KlaDFG~a~~  167 (313)
T KOG0198|consen   90 EYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLD--PSNGDVKLADFGLAKK  167 (313)
T ss_pred             eeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEe--CCCCeEEeccCccccc
Confidence            589999999999999988753          2789999999999999999999999999995  2146799999999887


Q ss_pred             CCC----CCCccceeeccceecccc
Q psy14897         78 VPS----SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~----~~~~~~~~~t~~~~~~~~   98 (99)
                      ...    ........||..|.+||.
T Consensus       168 ~~~~~~~~~~~~~~~Gtp~~maPEv  192 (313)
T KOG0198|consen  168 LESKGTKSDSELSVQGTPNYMAPEV  192 (313)
T ss_pred             cccccccccccccccCCccccCchh
Confidence            653    112234678888888875

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.71  E-value=5.4e-17  Score=103.52  Aligned_cols=90  Identities=24%  Similarity=0.418  Sum_probs=71.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+|+|...+...         .++.|++.++.|+|+ .+++|+|+++.|+++.   ....+++.|||++
T Consensus        67 ~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~---~~~~~kL~Dfg~~  143 (325)
T cd05594          67 HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLC  143 (325)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEEC---CCCCEEEecCCCC
Confidence            35689999999999998877543         267899999999997 7999999999999994   5566999999998


Q ss_pred             ecCCC-CCCccceeeccceecccc
Q psy14897         76 KNVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      +.... .......++|..|.+||+
T Consensus       144 ~~~~~~~~~~~~~~gt~~y~aPE~  167 (325)
T cd05594         144 KEGIKDGATMKTFCGTPEYLAPEV  167 (325)
T ss_pred             eecCCCCcccccccCCcccCCHHH
Confidence            76432 222234568888888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.71  E-value=3e-17  Score=104.73  Aligned_cols=90  Identities=26%  Similarity=0.424  Sum_probs=72.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+|+|...+...         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++.
T Consensus        67 ~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~~~  143 (323)
T cd05595          67 HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCK  143 (323)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEc---CCCCEEecccHHhc
Confidence            35689999999999998877543         2679999999999999999999999999994   55669999999987


Q ss_pred             cCCC-CCCccceeeccceecccc
Q psy14897         77 NVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      .... .......++|..|.+||+
T Consensus       144 ~~~~~~~~~~~~~gt~~y~aPE~  166 (323)
T cd05595         144 EGISDGATMKTFCGTPEYLAPEV  166 (323)
T ss_pred             cccCCCCccccccCCcCcCCccc
Confidence            6432 222334567888888885

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG4717|consensus

Probab=99.71  E-value=2.5e-17  Score=109.61  Aligned_cols=90  Identities=22%  Similarity=0.328  Sum_probs=82.4

Q ss_pred             CCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .++|+|.|.=++|||++++-.          ++|+.||+.++.|||...++|||++|+|+...  .+...+|+.|||++.
T Consensus        90 TKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF--EKlGlVKLTDFGFSN  167 (864)
T KOG4717|consen   90 TKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF--EKLGLVKLTDFGFSN  167 (864)
T ss_pred             ceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe--eecCceEeeeccccc
Confidence            468999999999999998853          34999999999999999999999999999875  567789999999999


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+.++.+....||+..|.+|||
T Consensus       168 kf~PG~kL~TsCGSLAYSAPEI  189 (864)
T KOG4717|consen  168 KFQPGKKLTTSCGSLAYSAPEI  189 (864)
T ss_pred             cCCCcchhhcccchhhccCchh
Confidence            9999999999999999999997

>KOG1187|consensus

Probab=99.71  E-value=3.1e-17  Score=106.35  Aligned_cols=89  Identities=26%  Similarity=0.303  Sum_probs=72.0

Q ss_pred             CeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhC---CeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSR---NFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~---~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      +.++|+|||.+|+|.+.|..+           +++.+++.|+.|||..   .++|+|+++.||+++   .....|++|||
T Consensus       146 ~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD---~~~~aKlsDFG  222 (361)
T KOG1187|consen  146 HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD---EDFNAKLSDFG  222 (361)
T ss_pred             eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC---CCCCEEccCcc
Confidence            489999999999999987542           4789999999999974   499999999999994   56678999999


Q ss_pred             ceecCCC-CCCccce-eeccceeccccC
Q psy14897         74 LAKNVPS-SPSYERH-VTTQTTRIGRID   99 (99)
Q Consensus        74 ~a~~~~~-~~~~~~~-~~t~~~~~~~~~   99 (99)
                      +|+.... ....... .||.+|..||+.
T Consensus       223 La~~~~~~~~~~~~~~~gt~gY~~PEy~  250 (361)
T KOG1187|consen  223 LAKLGPEGDTSVSTTVMGTFGYLAPEYA  250 (361)
T ss_pred             CcccCCccccceeeecCCCCccCChhhh
Confidence            9976554 3322223 789999999863

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.71  E-value=3.4e-17  Score=104.67  Aligned_cols=90  Identities=19%  Similarity=0.265  Sum_probs=72.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|.+.+..+         .++.|++.++.|+|+++++|+|++++|+++.   ....+++.|||+++
T Consensus        68 ~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~~  144 (329)
T cd05588          68 ESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLD---AEGHIKLTDYGMCK  144 (329)
T ss_pred             CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEECcCcccc
Confidence            45689999999999998877532         2778999999999999999999999999994   45669999999987


Q ss_pred             cC-CCCCCccceeeccceecccc
Q psy14897         77 NV-PSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~-~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .. .........++|..|.+||+
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~  167 (329)
T cd05588         145 EGIRPGDTTSTFCGTPNYIAPEI  167 (329)
T ss_pred             ccccCCCccccccCCccccCHHH
Confidence            53 22333344578888888875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=3.5e-17  Score=104.49  Aligned_cols=90  Identities=20%  Similarity=0.275  Sum_probs=72.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+....         ++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++.
T Consensus        68 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~a~  144 (330)
T cd05586          68 DSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLD---ATGHIALCDFGLSK  144 (330)
T ss_pred             CCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEecCCcCc
Confidence            356899999999999988775432         688999999999999999999999999994   45569999999987


Q ss_pred             cCCCC-CCccceeeccceecccc
Q psy14897         77 NVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      ..... ......++|..|.+||+
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~  167 (330)
T cd05586         145 ANLTDNKTTNTFCGTTEYLAPEV  167 (330)
T ss_pred             CCCCCCCCccCccCCccccCHHH
Confidence            64332 22234568888988884

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0032|consensus

Probab=99.71  E-value=4.2e-17  Score=106.27  Aligned_cols=93  Identities=26%  Similarity=0.391  Sum_probs=79.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCC-CCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKR-GNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~-~~~~~l~d~g~a~   76 (99)
                      .+.+++|||+++||+|++.+...        .++.|++.++.|||+.+++|+|++|+|+++..... ...+++.|||++.
T Consensus       108 ~~~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~  187 (382)
T KOG0032|consen  108 PDSVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK  187 (382)
T ss_pred             CCeEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence            35789999999999999988664        27899999999999999999999999999863332 2479999999999


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...........+||..|.+||.
T Consensus       188 ~~~~~~~~~~~~Gtp~y~APEv  209 (382)
T KOG0032|consen  188 FIKPGERLHTIVGTPEYVAPEV  209 (382)
T ss_pred             EccCCceEeeecCCccccCchh
Confidence            9887666677899999999985

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.70  E-value=5e-17  Score=105.56  Aligned_cols=90  Identities=27%  Similarity=0.366  Sum_probs=73.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ++..++||||+.+|+|.+.++...        ++.|++.++.|+|+++++|+|++++|+++.   ....+++.|||++..
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~---~~~~ikL~DfG~a~~  191 (371)
T cd05622         115 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCMK  191 (371)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEC---CCCCEEEEeCCceeE
Confidence            356899999999999998886432        678999999999999999999999999994   456699999999987


Q ss_pred             CCCCC--Cccceeeccceecccc
Q psy14897         78 VPSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      +....  .....++|..|.+||+
T Consensus       192 ~~~~~~~~~~~~~gt~~y~aPE~  214 (371)
T cd05622         192 MNKEGMVRCDTAVGTPDYISPEV  214 (371)
T ss_pred             cCcCCcccccCcccCccccCHHH
Confidence            65432  2234568888999884

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.70  E-value=4.2e-17  Score=103.99  Aligned_cols=90  Identities=22%  Similarity=0.351  Sum_probs=72.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+....         ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++
T Consensus        68 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~---~~~~~kl~DfG~a~  144 (325)
T cd05602          68 ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHIVLTDFGLCK  144 (325)
T ss_pred             CCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEEccCCCCc
Confidence            456899999999999988875432         679999999999999999999999999994   45569999999987


Q ss_pred             cCCC-CCCccceeeccceecccc
Q psy14897         77 NVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      .... .......++|..|.+||+
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~  167 (325)
T cd05602         145 ENIEHNGTTSTFCGTPEYLAPEV  167 (325)
T ss_pred             ccccCCCCcccccCCccccCHHH
Confidence            6432 222344578888998884

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.70  E-value=5e-17  Score=105.50  Aligned_cols=90  Identities=27%  Similarity=0.374  Sum_probs=73.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ++..++||||+.+|+|.+.+....        ++.|++.|+.|||+++++|+|++++|+++.   ....++++|||++..
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~---~~~~~kL~DfG~~~~  191 (370)
T cd05596         115 DKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCMK  191 (370)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEc---CCCCEEEEeccceee
Confidence            356899999999999999876532        678999999999999999999999999994   556699999999987


Q ss_pred             CCCCC--Cccceeeccceecccc
Q psy14897         78 VPSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      +....  .....++|..|.+||+
T Consensus       192 ~~~~~~~~~~~~~gt~~y~aPE~  214 (370)
T cd05596         192 MDANGMVRCDTAVGTPDYISPEV  214 (370)
T ss_pred             ccCCCcccCCCCCCCcCeECHHH
Confidence            64332  2234568888999884

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.70  E-value=4.5e-17  Score=103.67  Aligned_cols=90  Identities=26%  Similarity=0.355  Sum_probs=72.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|...+....         ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++
T Consensus        68 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~~~  144 (321)
T cd05603          68 AEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLD---SQGHVVLTDFGLCK  144 (321)
T ss_pred             CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEccCCCCc
Confidence            456899999999999988775422         678999999999999999999999999994   45569999999987


Q ss_pred             cCCC-CCCccceeeccceecccc
Q psy14897         77 NVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      .... .......++|..|.+||+
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~  167 (321)
T cd05603         145 EGVEPEETTSTFCGTPEYLAPEV  167 (321)
T ss_pred             cCCCCCCccccccCCcccCCHHH
Confidence            6422 222344567888888875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.70  E-value=4.2e-17  Score=104.18  Aligned_cols=90  Identities=21%  Similarity=0.286  Sum_probs=72.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|...+...         .++.|++.++.|+|+++++|+|++++|+++.   ....+++.|||++.
T Consensus        68 ~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~~~  144 (327)
T cd05617          68 TSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD---ADGHIKLTDYGMCK  144 (327)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe---CCCCEEEeccccce
Confidence            35689999999999998877542         2789999999999999999999999999995   45569999999987


Q ss_pred             cCC-CCCCccceeeccceecccc
Q psy14897         77 NVP-SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~-~~~~~~~~~~t~~~~~~~~   98 (99)
                      ... ........++|..|.+||+
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~  167 (327)
T cd05617         145 EGLGPGDTTSTFCGTPNYIAPEI  167 (327)
T ss_pred             eccCCCCceecccCCcccCCHHH
Confidence            532 2223344578888988885

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG4721|consensus

Probab=99.70  E-value=7.2e-18  Score=113.05  Aligned_cols=88  Identities=23%  Similarity=0.417  Sum_probs=78.7

Q ss_pred             CeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          8 QSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ..|+||||+..|.|...|+.++         |..+|+.|+.|||.+.|||||+|..|+++.   ....+|+.|||.++.+
T Consensus       186 cyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs---~~d~VKIsDFGTS~e~  262 (904)
T KOG4721|consen  186 CYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS---YDDVVKISDFGTSKEL  262 (904)
T ss_pred             eeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee---ccceEEeccccchHhh
Confidence            4689999999999999998765         779999999999999999999999999994   5566999999999999


Q ss_pred             CCCCCccceeeccceecccc
Q psy14897         79 PSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ........++||-.+.+||.
T Consensus       263 ~~~STkMSFaGTVaWMAPEv  282 (904)
T KOG4721|consen  263 SDKSTKMSFAGTVAWMAPEV  282 (904)
T ss_pred             hhhhhhhhhhhhHhhhCHHH
Confidence            88777788899988888874

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.70  E-value=4.9e-17  Score=103.85  Aligned_cols=90  Identities=23%  Similarity=0.277  Sum_probs=72.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+++||||+.+|+|.+.+..+.         ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++
T Consensus        77 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~---~~~~~kl~DfG~~~  153 (332)
T cd05614          77 EAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLD---SEGHVVLTDFGLSK  153 (332)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEEC---CCCCEEEeeCcCCc
Confidence            456899999999999998875432         678999999999999999999999999994   45569999999988


Q ss_pred             cCCCCC--Cccceeeccceecccc
Q psy14897         77 NVPSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      .+....  .....++|..|.+||+
T Consensus       154 ~~~~~~~~~~~~~~gt~~y~aPE~  177 (332)
T cd05614         154 EFLSEEKERTYSFCGTIEYMAPEI  177 (332)
T ss_pred             cccccCCCccccccCCccccCHHH
Confidence            654332  1223468888998885

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0580|consensus

Probab=99.70  E-value=2.7e-17  Score=100.10  Aligned_cols=91  Identities=25%  Similarity=0.385  Sum_probs=78.2

Q ss_pred             CCCCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          4 FRSTQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         4 ~~~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      ..+...|+++||..+|++...|+.+           .+..|++.|+.|+|.++++|||++|+|++++   ....++++||
T Consensus        92 hd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg---~~~~lkiAdf  168 (281)
T KOG0580|consen   92 HDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLG---SAGELKIADF  168 (281)
T ss_pred             eccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccC---CCCCeeccCC
Confidence            3557899999999999999988732           2889999999999999999999999999996   4455899999


Q ss_pred             cceecCCCCCCccceeeccceecccc
Q psy14897         73 GLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |.+-.-+ .....+.|||..|.+||.
T Consensus       169 GwsV~~p-~~kR~tlcgt~dyl~pEm  193 (281)
T KOG0580|consen  169 GWSVHAP-SNKRKTLCGTLDYLPPEM  193 (281)
T ss_pred             CceeecC-CCCceeeecccccCCHhh
Confidence            9987654 666788899999999984

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.70  E-value=6.8e-17  Score=107.92  Aligned_cols=90  Identities=23%  Similarity=0.321  Sum_probs=72.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      .+..++||||+.+|+|.+.+...             .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.||
T Consensus       137 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~---~~~~~kL~DF  213 (478)
T PTZ00267        137 DDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM---PTGIIKLGDF  213 (478)
T ss_pred             CCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC---CCCcEEEEeC
Confidence            46789999999999998866421             2678999999999999999999999999995   4556999999


Q ss_pred             cceecCCCCCC---ccceeeccceecccc
Q psy14897         73 GLAKNVPSSPS---YERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~---~~~~~~t~~~~~~~~   98 (99)
                      |+++.+.....   ....+||..|.+||+
T Consensus       214 gla~~~~~~~~~~~~~~~~gt~~y~aPE~  242 (478)
T PTZ00267        214 GFSKQYSDSVSLDVASSFCGTPYYLAPEL  242 (478)
T ss_pred             cCceecCCccccccccccCCCccccCHhH
Confidence            99987654321   234568888999875

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.70  E-value=5.2e-17  Score=104.86  Aligned_cols=70  Identities=33%  Similarity=0.454  Sum_probs=60.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|.+.+..+.         ++.|++.++.|+|+++++|+|++++|+++.   ....+++.|||++.
T Consensus        73 ~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~---~~~~vkL~DfG~~~  149 (360)
T cd05627          73 KRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLD---AKGHVKLSDFGLCT  149 (360)
T ss_pred             CCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC---CCCCEEEeeccCCc
Confidence            356899999999999999885432         789999999999999999999999999994   45669999999987


Q ss_pred             cC
Q psy14897         77 NV   78 (99)
Q Consensus        77 ~~   78 (99)
                      .+
T Consensus       150 ~~  151 (360)
T cd05627         150 GL  151 (360)
T ss_pred             cc
Confidence            54

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.70  E-value=5.6e-17  Score=103.21  Aligned_cols=90  Identities=23%  Similarity=0.321  Sum_probs=73.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+....         ++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++.
T Consensus        68 ~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~a~  144 (316)
T cd05592          68 KEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLD---KDGHIKIADFGMCK  144 (316)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEEC---CCCCEEEccCcCCe
Confidence            356899999999999988875432         789999999999999999999999999994   55669999999998


Q ss_pred             cCCCC-CCccceeeccceecccc
Q psy14897         77 NVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      ..... ......++|..|.+||+
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~  167 (316)
T cd05592         145 ENMNGEGKASTFCGTPDYIAPEI  167 (316)
T ss_pred             ECCCCCCccccccCCccccCHHH
Confidence            65332 22244578888988885

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0605|consensus

Probab=99.70  E-value=4.3e-17  Score=107.72  Aligned_cols=69  Identities=30%  Similarity=0.444  Sum_probs=61.5

Q ss_pred             CCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +.+|+||||+.|||+.+.|....         ++.+++.|+..+|..|++|||+||+|++++   ..+.+|++|||+|..
T Consensus       214 ~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD---~~GHiKLSDFGLs~g  290 (550)
T KOG0605|consen  214 EYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLID---AKGHIKLSDFGLSTG  290 (550)
T ss_pred             CeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeec---CCCCEeeccccccch
Confidence            57999999999999999986533         788999999999999999999999999995   667799999999864


Q ss_pred             C
Q psy14897         78 V   78 (99)
Q Consensus        78 ~   78 (99)
                      +
T Consensus       291 l  291 (550)
T KOG0605|consen  291 L  291 (550)
T ss_pred             h
Confidence            4

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.70  E-value=5.2e-17  Score=103.51  Aligned_cols=90  Identities=23%  Similarity=0.241  Sum_probs=72.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|.+.+...         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++
T Consensus        73 ~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~---~~~~~kL~DfG~~~  149 (323)
T cd05616          73 MDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---SEGHIKIADFGMCK  149 (323)
T ss_pred             CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEEC---CCCcEEEccCCCce
Confidence            35689999999999998877542         2789999999999999999999999999994   55669999999987


Q ss_pred             cCCCC-CCccceeeccceecccc
Q psy14897         77 NVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      ..... ......++|..|.+||+
T Consensus       150 ~~~~~~~~~~~~~gt~~y~aPE~  172 (323)
T cd05616         150 ENMWDGVTTKTFCGTPDYIAPEI  172 (323)
T ss_pred             ecCCCCCccccCCCChhhcCHHH
Confidence            64322 22234567888888885

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.70  E-value=5.3e-17  Score=103.46  Aligned_cols=90  Identities=20%  Similarity=0.273  Sum_probs=72.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|.+.+....         ++.|++.++.|+|+++++|+|+++.|+++.   ....++++|||+++
T Consensus        68 ~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~---~~~~~kL~DfG~~~  144 (320)
T cd05590          68 PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADFGMCK  144 (320)
T ss_pred             CCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEeeCCCCe
Confidence            456899999999999988775432         779999999999999999999999999994   45669999999987


Q ss_pred             cCCCC-CCccceeeccceecccc
Q psy14897         77 NVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      ..... ......++|..|.+||+
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~  167 (320)
T cd05590         145 EGIFNGKTTSTFCGTPDYIAPEI  167 (320)
T ss_pred             ecCcCCCcccccccCccccCHHH
Confidence            64322 22234567888888885

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.70  E-value=6.3e-17  Score=103.50  Aligned_cols=90  Identities=21%  Similarity=0.280  Sum_probs=72.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|...+...         .++.|++.++.|+|+++++|+|+++.|+++.   ....++++|||+++
T Consensus        68 ~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~---~~~~~kL~DfG~~~  144 (329)
T cd05618          68 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGMCK  144 (329)
T ss_pred             CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCCEEEeeCCccc
Confidence            35689999999999998877542         2778999999999999999999999999994   45669999999987


Q ss_pred             cCCC-CCCccceeeccceecccc
Q psy14897         77 NVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      .... .......++|..|.+||+
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~  167 (329)
T cd05618         145 EGLRPGDTTSTFCGTPNYIAPEI  167 (329)
T ss_pred             cccCCCCccccccCCccccCHHH
Confidence            6432 222344578888888885

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.70  E-value=6.3e-17  Score=103.12  Aligned_cols=90  Identities=24%  Similarity=0.349  Sum_probs=72.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+..+.         ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++.
T Consensus        68 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~---~~~~~kl~Dfg~~~  144 (323)
T cd05575          68 ADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLD---SQGHVVLTDFGLCK  144 (323)
T ss_pred             CCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEeccCCCc
Confidence            356899999999999988875432         679999999999999999999999999994   45669999999987


Q ss_pred             cCCCC-CCccceeeccceecccc
Q psy14897         77 NVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      ..... ......++|..|.+||+
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~  167 (323)
T cd05575         145 EGIEHSKTTSTFCGTPEYLAPEV  167 (323)
T ss_pred             ccccCCCccccccCChhhcChhh
Confidence            64332 22234567888888885

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.70  E-value=5.5e-17  Score=104.34  Aligned_cols=87  Identities=23%  Similarity=0.335  Sum_probs=72.5

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +..++||||+.+|+|.+.+...         .++.|++.++.|+|+++++|+|+++.|+++.   ....++++|||++..
T Consensus       104 ~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~---~~~~ikL~DFG~a~~  180 (340)
T PTZ00426        104 SYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD---KDGFIKMTDFGFAKV  180 (340)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC---CCCCEEEecCCCCee
Confidence            5689999999999999988643         2679999999999999999999999999994   556699999999987


Q ss_pred             CCCCCCccceeeccceecccc
Q psy14897         78 VPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +....  ...++|..|.+||+
T Consensus       181 ~~~~~--~~~~gt~~y~aPE~  199 (340)
T PTZ00426        181 VDTRT--YTLCGTPEYIAPEI  199 (340)
T ss_pred             cCCCc--ceecCChhhcCHHH
Confidence            64332  34577888888885

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=7.2e-17  Score=102.44  Aligned_cols=90  Identities=21%  Similarity=0.293  Sum_probs=72.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+....         ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++
T Consensus        65 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~---~~~~~kl~Dfg~~~  141 (312)
T cd05585          65 PEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLD---YQGHIALCDFGLCK  141 (312)
T ss_pred             CCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEEC---CCCcEEEEECcccc
Confidence            357899999999999998885432         678999999999999999999999999994   45569999999987


Q ss_pred             cCCCC-CCccceeeccceecccc
Q psy14897         77 NVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      ..... ......++|..|.+||+
T Consensus       142 ~~~~~~~~~~~~~gt~~y~aPE~  164 (312)
T cd05585         142 LNMKDDDKTNTFCGTPEYLAPEL  164 (312)
T ss_pred             cCccCCCccccccCCcccCCHHH
Confidence            64322 22234568888999885

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.70  E-value=6.6e-17  Score=102.95  Aligned_cols=90  Identities=22%  Similarity=0.226  Sum_probs=72.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|...+...         .++.|++.++.|||+++++|+|++++|+++.   ....+++.|||++.
T Consensus        68 ~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~---~~~~~kL~Dfg~~~  144 (321)
T cd05591          68 KDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLD---AEGHCKLADFGMCK  144 (321)
T ss_pred             CCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEeecccce
Confidence            35689999999999998877532         2679999999999999999999999999994   45569999999987


Q ss_pred             cCCCC-CCccceeeccceecccc
Q psy14897         77 NVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      ..... ......++|..|.+||+
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~  167 (321)
T cd05591         145 EGILNGVTTTTFCGTPDYIAPEI  167 (321)
T ss_pred             ecccCCccccccccCccccCHHH
Confidence            64322 22234567888888874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=5.7e-17  Score=103.66  Aligned_cols=88  Identities=24%  Similarity=0.365  Sum_probs=72.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+++...         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++.
T Consensus        73 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kL~Dfg~a~  149 (333)
T cd05600          73 DEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLID---ASGHIKLTDFGLSK  149 (333)
T ss_pred             CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCCEEEEeCcCCc
Confidence            45689999999999999988642         2678999999999999999999999999994   45669999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .....  ....++|..|.+||+
T Consensus       150 ~~~~~--~~~~~gt~~y~aPE~  169 (333)
T cd05600         150 GIVTY--ANSVVGSPDYMAPEV  169 (333)
T ss_pred             ccccc--cCCcccCccccChhH
Confidence            65442  234567888888885

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=7e-17  Score=104.82  Aligned_cols=69  Identities=32%  Similarity=0.471  Sum_probs=59.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..|+||||+.+|+|.+.+...         .++.|++.++.|+|+++++|+|++++|+++.   ....+++.|||+++
T Consensus        73 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~---~~~~~kl~DfGla~  149 (377)
T cd05629          73 AQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILID---RGGHIKLSDFGLST  149 (377)
T ss_pred             CCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---CCCCEEEeeccccc
Confidence            35689999999999999887542         2688999999999999999999999999994   45569999999986


Q ss_pred             c
Q psy14897         77 N   77 (99)
Q Consensus        77 ~   77 (99)
                      .
T Consensus       150 ~  150 (377)
T cd05629         150 G  150 (377)
T ss_pred             c
Confidence            4

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.69  E-value=7.9e-17  Score=103.08  Aligned_cols=90  Identities=27%  Similarity=0.290  Sum_probs=72.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+|+|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++
T Consensus        73 ~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~---~~~~~kl~DfG~a  149 (331)
T cd05624          73 ENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD---MNGHIRLADFGSC  149 (331)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc---CCCCEEEEeccce
Confidence            45689999999999999988642          1678999999999999999999999999994   4556999999999


Q ss_pred             ecCCCCCCc--cceeeccceecccc
Q psy14897         76 KNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      ..+......  ...++|..|.+||+
T Consensus       150 ~~~~~~~~~~~~~~~gt~~y~aPE~  174 (331)
T cd05624         150 LKMNQDGTVQSSVAVGTPDYISPEI  174 (331)
T ss_pred             eeccCCCceeeccccCCcccCCHHH
Confidence            876543322  23467888888874

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.69  E-value=7e-17  Score=104.97  Aligned_cols=69  Identities=30%  Similarity=0.448  Sum_probs=59.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+++||||+.+|+|.+.+...         .++.|++.++.|+|+++++|+|++++|+++.   ....++++|||++.
T Consensus        73 ~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~---~~g~~kL~DFGla~  149 (382)
T cd05625          73 KDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCT  149 (382)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEEeECCCCc
Confidence            35689999999999999887543         2678999999999999999999999999994   55669999999875


Q ss_pred             c
Q psy14897         77 N   77 (99)
Q Consensus        77 ~   77 (99)
                      .
T Consensus       150 ~  150 (382)
T cd05625         150 G  150 (382)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.69  E-value=6.8e-17  Score=103.06  Aligned_cols=90  Identities=23%  Similarity=0.325  Sum_probs=72.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+|+|...+...         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++
T Consensus        68 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~---~~~~~kL~DfG~~~  144 (325)
T cd05604          68 TEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLD---SQGHVVLTDFGLCK  144 (325)
T ss_pred             CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEeecCCcc
Confidence            45789999999999998877542         2789999999999999999999999999995   45569999999987


Q ss_pred             cCCC-CCCccceeeccceecccc
Q psy14897         77 NVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      .... .......++|..|.+||+
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~  167 (325)
T cd05604         145 EGIAQSDTTTTFCGTPEYLAPEV  167 (325)
T ss_pred             cCCCCCCCcccccCChhhCCHHH
Confidence            6432 222344568888888885

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=1e-16  Score=102.55  Aligned_cols=90  Identities=27%  Similarity=0.324  Sum_probs=72.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++.+++||||+.+|+|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++
T Consensus        73 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~  149 (331)
T cd05597          73 ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD---KNGHIRLADFGSC  149 (331)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEEC---CCCCEEEEECCce
Confidence            45689999999999999988541          2778999999999999999999999999994   4556999999998


Q ss_pred             ecCCCCCCc--cceeeccceecccc
Q psy14897         76 KNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      ..+......  ...++|..|.+||+
T Consensus       150 ~~~~~~~~~~~~~~~gt~~y~aPE~  174 (331)
T cd05597         150 LRLLADGTVQSNVAVGTPDYISPEI  174 (331)
T ss_pred             eecCCCCCccccceeccccccCHHH
Confidence            876543322  22467888888874

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.69  E-value=8.2e-17  Score=102.99  Aligned_cols=90  Identities=28%  Similarity=0.314  Sum_probs=72.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+|+|.+++...          .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||++
T Consensus        73 ~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~---~~~~~kL~DfG~a  149 (332)
T cd05623          73 ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD---MNGHIRLADFGSC  149 (332)
T ss_pred             CCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCCEEEeecchh
Confidence            35689999999999999998642          2678999999999999999999999999994   4556999999998


Q ss_pred             ecCCCCCCc--cceeeccceecccc
Q psy14897         76 KNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      ..+......  ...+||..|.+||+
T Consensus       150 ~~~~~~~~~~~~~~~gt~~y~aPE~  174 (332)
T cd05623         150 LKLMEDGTVQSSVAVGTPDYISPEI  174 (332)
T ss_pred             eecccCCcceecccccCccccCHHH
Confidence            765433221  23468888988884

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.69  E-value=7e-17  Score=102.75  Aligned_cols=90  Identities=22%  Similarity=0.297  Sum_probs=72.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+++||||+.+|+|.+.+..+.         ++.|++.++.|+|+++++|+|++++|+++.   ....+++.|||+++
T Consensus        68 ~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~---~~~~~kl~Dfg~~~  144 (316)
T cd05620          68 KEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLD---RDGHIKIADFGMCK  144 (316)
T ss_pred             CCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEeCccCCCe
Confidence            356899999999999988875432         678999999999999999999999999994   45569999999987


Q ss_pred             cCCC-CCCccceeeccceecccc
Q psy14897         77 NVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      .... .......++|..|.+||+
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~  167 (316)
T cd05620         145 ENVFGDNRASTFCGTPDYIAPEI  167 (316)
T ss_pred             ecccCCCceeccCCCcCccCHHH
Confidence            5422 222244567888888885

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=7.9e-17  Score=101.36  Aligned_cols=88  Identities=20%  Similarity=0.358  Sum_probs=72.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+++..+.         ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++.
T Consensus        73 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~---~~~~~kl~Dfg~~~  149 (291)
T cd05612          73 QRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD---KEGHIKLTDFGFAK  149 (291)
T ss_pred             CCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEEecCcch
Confidence            456899999999999998876432         779999999999999999999999999994   45569999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+....  ...+++..|.+||+
T Consensus       150 ~~~~~~--~~~~gt~~y~aPE~  169 (291)
T cd05612         150 KLRDRT--WTLCGTPEYLAPEV  169 (291)
T ss_pred             hccCCc--ccccCChhhcCHHH
Confidence            764432  23567888888874

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.69  E-value=7.6e-17  Score=103.07  Aligned_cols=88  Identities=24%  Similarity=0.418  Sum_probs=72.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+|+|.+.+....         ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++.
T Consensus        90 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~~~  166 (329)
T PTZ00263         90 ENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLD---NKGHVKVTDFGFAK  166 (329)
T ss_pred             CCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEC---CCCCEEEeeccCce
Confidence            457899999999999998876432         678999999999999999999999999994   55669999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ......  ...++|..|.+||+
T Consensus       167 ~~~~~~--~~~~gt~~y~aPE~  186 (329)
T PTZ00263        167 KVPDRT--FTLCGTPEYLAPEV  186 (329)
T ss_pred             EcCCCc--ceecCChhhcCHHH
Confidence            765432  33567888888874

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.69  E-value=9.9e-17  Score=104.04  Aligned_cols=68  Identities=32%  Similarity=0.464  Sum_probs=59.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+++||||+.+|+|.+.+....         ++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++.
T Consensus        73 ~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~---~~~~ikL~DFG~a~  149 (376)
T cd05598          73 KDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCT  149 (376)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEEC---CCCCEEEEeCCCCc
Confidence            457899999999999999886432         678999999999999999999999999994   55669999999875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0666|consensus

Probab=99.69  E-value=3.5e-17  Score=103.19  Aligned_cols=92  Identities=27%  Similarity=0.334  Sum_probs=75.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEe-eCCCCCeEEEe
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMG-LGKRGNLVYII   70 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~-~~~~~~~~~l~   70 (99)
                      +..+++++||.++ ||...++-+              .+.-|++.|+.|||++=++|||++|.||++. .......+|++
T Consensus       100 d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIa  178 (438)
T KOG0666|consen  100 DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIA  178 (438)
T ss_pred             CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEee
Confidence            6789999999998 888777532              2778999999999999999999999999984 22234789999


Q ss_pred             eccceecCCCC----CCccceeeccceecccc
Q psy14897         71 DFGLAKNVPSS----PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        71 d~g~a~~~~~~----~~~~~~~~t~~~~~~~~   98 (99)
                      |+|+++.+.+.    ....+.++|.||++||+
T Consensus       179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPEL  210 (438)
T KOG0666|consen  179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPEL  210 (438)
T ss_pred             cccHHHHhhccccccccCCceEEEEEecChHH
Confidence            99999987443    23466789999999996

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.69  E-value=8.8e-17  Score=104.56  Aligned_cols=69  Identities=30%  Similarity=0.408  Sum_probs=59.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|.+.+...         .++.|++.++.|+|+.+++|+|++++|+++.   ....+++.|||++.
T Consensus        73 ~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~---~~~~~kL~DFGl~~  149 (381)
T cd05626          73 KDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILID---LDGHIKLTDFGLCT  149 (381)
T ss_pred             CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEEC---CCCCEEEeeCcCCc
Confidence            45689999999999999887542         2678999999999999999999999999994   45669999999875


Q ss_pred             c
Q psy14897         77 N   77 (99)
Q Consensus        77 ~   77 (99)
                      .
T Consensus       150 ~  150 (381)
T cd05626         150 G  150 (381)
T ss_pred             c
Confidence            4

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0669|consensus

Probab=99.69  E-value=2.6e-17  Score=101.50  Aligned_cols=88  Identities=27%  Similarity=0.462  Sum_probs=75.4

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ..+++||+++++ ||+-.|...          +++.++..|+.|+|++.++|||+++.|+++   .....++++|||+++
T Consensus        97 ~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI---t~dgilklADFGlar  172 (376)
T KOG0669|consen   97 ATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI---TKDGILKLADFGLAR  172 (376)
T ss_pred             ceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE---cCCceEEeecccccc
Confidence            468999999998 777777543          378999999999999999999999999999   466789999999998


Q ss_pred             cCC-----CCCCccceeeccceecccc
Q psy14897         77 NVP-----SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~-----~~~~~~~~~~t~~~~~~~~   98 (99)
                      .++     ..+.|+.++.|.||++||+
T Consensus       173 ~fs~~~n~~kprytnrvvTLwYrppEl  199 (376)
T KOG0669|consen  173 AFSTSKNVVKPRYTNRVVTLWYRPPEL  199 (376)
T ss_pred             ceecccccCCCCcccceeeeecCCHHH
Confidence            764     3356788899999999985

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.69  E-value=1.1e-16  Score=102.24  Aligned_cols=90  Identities=24%  Similarity=0.318  Sum_probs=73.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+|+|.+++...          .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||++
T Consensus        73 ~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~---~~~~~kL~Dfg~a  149 (330)
T cd05601          73 KDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLID---RTGHIKLADFGSA  149 (330)
T ss_pred             CCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEEC---CCCCEEeccCCCC
Confidence            35689999999999999988653          2678999999999999999999999999994   5566999999999


Q ss_pred             ecCCCCCCc--cceeeccceecccc
Q psy14897         76 KNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      ..+......  ....+|..|.+||+
T Consensus       150 ~~~~~~~~~~~~~~~gt~~y~aPE~  174 (330)
T cd05601         150 ARLTANKMVNSKLPVGTPDYIAPEV  174 (330)
T ss_pred             eECCCCCceeeecccCCccccCHHH
Confidence            876543322  22357888888885

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=8e-17  Score=103.97  Aligned_cols=70  Identities=33%  Similarity=0.436  Sum_probs=60.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+..+         .++.|++.++.|+|+++++|+|++++|+++.   ....+++.|||++.
T Consensus        73 ~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~~~  149 (364)
T cd05599          73 ENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLD---AKGHIKLSDFGLCT  149 (364)
T ss_pred             CCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEeecccce
Confidence            45689999999999999987543         2789999999999999999999999999994   45569999999987


Q ss_pred             cC
Q psy14897         77 NV   78 (99)
Q Consensus        77 ~~   78 (99)
                      .+
T Consensus       150 ~~  151 (364)
T cd05599         150 GL  151 (364)
T ss_pred             ec
Confidence            64

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.68  E-value=1.5e-16  Score=101.48  Aligned_cols=90  Identities=22%  Similarity=0.260  Sum_probs=72.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+|+|.+.+....         ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~  148 (323)
T cd05584          72 GGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLD---AQGHVKLTDFGLCK  148 (323)
T ss_pred             CCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEeeCcCCe
Confidence            356899999999999998885432         678999999999999999999999999994   45669999999987


Q ss_pred             cCCCCC-Cccceeeccceecccc
Q psy14897         77 NVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ...... .....++|..|.+||+
T Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~  171 (323)
T cd05584         149 ESIHEGTVTHTFCGTIEYMAPEI  171 (323)
T ss_pred             ecccCCCcccccCCCccccChhh
Confidence            643322 2233467888999985

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG4250|consensus

Probab=99.68  E-value=1.5e-16  Score=107.98  Aligned_cols=93  Identities=18%  Similarity=0.379  Sum_probs=78.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch------------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCC-CCCeEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK------------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGK-RGNLVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~------------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~-~~~~~~l~d~   72 (99)
                      .....+||||+.+|||...|++=.            +...++.|+.|||.++|+|||+||.||+..... .....|+.||
T Consensus        89 ~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDf  168 (732)
T KOG4250|consen   89 TRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDF  168 (732)
T ss_pred             cccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecc
Confidence            345689999999999999997411            567889999999999999999999999874223 3345689999


Q ss_pred             cceecCCCCCCccceeeccceecccc
Q psy14897         73 GLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |.|+.+.+.....+.+||..|..|++
T Consensus       169 G~Arel~d~s~~~S~vGT~~YLhPel  194 (732)
T KOG4250|consen  169 GAARELDDNSLFTSLVGTEEYLHPEL  194 (732)
T ss_pred             cccccCCCCCeeeeecCchhhcChHH
Confidence            99999999988899999999999986

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.68  E-value=1.5e-16  Score=101.28  Aligned_cols=90  Identities=23%  Similarity=0.285  Sum_probs=72.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+...         .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++.
T Consensus        68 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Dfg~~~  144 (316)
T cd05619          68 KENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD---TDGHIKIADFGMCK  144 (316)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEccCCcce
Confidence            35688999999999999888642         2779999999999999999999999999994   45569999999987


Q ss_pred             cCCC-CCCccceeeccceecccc
Q psy14897         77 NVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      .... .......++|..|.+||+
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~  167 (316)
T cd05619         145 ENMLGDAKTCTFCGTPDYIAPEI  167 (316)
T ss_pred             ECCCCCCceeeecCCccccCHHH
Confidence            6432 222344567888988875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.68  E-value=1.3e-16  Score=101.82  Aligned_cols=90  Identities=22%  Similarity=0.243  Sum_probs=72.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|.+.+...         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++
T Consensus        73 ~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~---~~~~ikL~Dfg~~~  149 (323)
T cd05615          73 VDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD---SEGHIKIADFGMCK  149 (323)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEecccccc
Confidence            35689999999999998887542         2789999999999999999999999999995   45569999999987


Q ss_pred             cCCCCC-Cccceeeccceecccc
Q psy14897         77 NVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ...... .....++|..|.+||+
T Consensus       150 ~~~~~~~~~~~~~gt~~y~aPE~  172 (323)
T cd05615         150 EHMVDGVTTRTFCGTPDYIAPEI  172 (323)
T ss_pred             ccCCCCccccCccCCccccCHHH
Confidence            653322 2233467888888874

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0986|consensus

Probab=99.68  E-value=1.3e-16  Score=104.42  Aligned_cols=90  Identities=27%  Similarity=0.376  Sum_probs=80.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch-----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK-----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~-----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+.+|+|+..|+||||.-.|....           ++.+|+.|+.+||..+|+.||++|+||+++   ....++++|+|+
T Consensus       257 kd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLD---d~GhvRISDLGL  333 (591)
T KOG0986|consen  257 KDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLD---DHGHVRISDLGL  333 (591)
T ss_pred             CCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeec---cCCCeEeeccce
Confidence            467999999999999998886533           789999999999999999999999999995   556699999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |-.++.......++||.+|.+||+
T Consensus       334 Avei~~g~~~~~rvGT~GYMAPEv  357 (591)
T KOG0986|consen  334 AVEIPEGKPIRGRVGTVGYMAPEV  357 (591)
T ss_pred             EEecCCCCccccccCcccccCHHH
Confidence            999988888888899999999985

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=1.3e-16  Score=102.40  Aligned_cols=73  Identities=32%  Similarity=0.460  Sum_probs=62.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+|+|.+.+...         .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||++.
T Consensus        73 ~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~---~~~~~kL~Dfg~~~  149 (350)
T cd05573          73 EEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILID---ADGHIKLADFGLCK  149 (350)
T ss_pred             CCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEeecCCCCc
Confidence            45689999999999999988653         2678999999999999999999999999994   45669999999988


Q ss_pred             cCCCC
Q psy14897         77 NVPSS   81 (99)
Q Consensus        77 ~~~~~   81 (99)
                      .+...
T Consensus       150 ~~~~~  154 (350)
T cd05573         150 KMNKA  154 (350)
T ss_pred             cCccc
Confidence            76443

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.67  E-value=1.7e-16  Score=100.97  Aligned_cols=90  Identities=22%  Similarity=0.262  Sum_probs=72.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+|+|.+.+...         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++.
T Consensus        70 ~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~~~  146 (318)
T cd05582          70 EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSK  146 (318)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEEC---CCCcEEEeeccCCc
Confidence            45689999999999998887542         2789999999999999999999999999994   45569999999988


Q ss_pred             cCCCC-CCccceeeccceecccc
Q psy14897         77 NVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      ..... ......+++..|.+||+
T Consensus       147 ~~~~~~~~~~~~~g~~~y~aPE~  169 (318)
T cd05582         147 ESIDHEKKAYSFCGTVEYMAPEV  169 (318)
T ss_pred             ccCCCCCceecccCChhhcCHHH
Confidence            65443 22234567777888874

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.67  E-value=3.6e-16  Score=97.71  Aligned_cols=90  Identities=23%  Similarity=0.297  Sum_probs=72.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      +...++||||+.+|+|.+.+...           .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||+
T Consensus        65 ~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~~l~Dfg~  141 (277)
T cd05607          65 KTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD---DQGNCRLSDLGL  141 (277)
T ss_pred             CCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc---CCCCEEEeecee
Confidence            45689999999999998776421           2678999999999999999999999999994   455689999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +..+..........++..|.+||+
T Consensus       142 ~~~~~~~~~~~~~~~~~~y~aPE~  165 (277)
T cd05607         142 AVELKDGKTITQRAGTNGYMAPEI  165 (277)
T ss_pred             eeecCCCceeeccCCCCCccCHHH
Confidence            987755444344567778888874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.67  E-value=3.8e-16  Score=99.89  Aligned_cols=66  Identities=27%  Similarity=0.425  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCCCCcc---ceeeccceecccc
Q psy14897         30 EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYE---RHVTTQTTRIGRI   98 (99)
Q Consensus        30 ~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~~~---~~~~t~~~~~~~~   98 (99)
                      ++.|++.|+.|+|+++++|+|+++.|+++.   ....+++.|||+++.+.......   ...++..|.+||.
T Consensus       179 ~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~---~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~  247 (338)
T cd05102         179 YSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPES  247 (338)
T ss_pred             HHHHHHHHHHHHHHCCEECCCCccceEEEc---CCCcEEEeecccccccccCcchhcccCCCCCccccCcHH
Confidence            567999999999999999999999999995   44569999999998764332221   1223456777774

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.66  E-value=2.6e-16  Score=100.34  Aligned_cols=90  Identities=24%  Similarity=0.340  Sum_probs=72.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      .+..++||||+.+|+|...+....        ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++..
T Consensus        74 ~~~~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~---~~~~~kL~Dfg~~~~  150 (324)
T cd05589          74 EDHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLD---TEGFVKIADFGLCKE  150 (324)
T ss_pred             CCEEEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCcEEeCcccCCcc
Confidence            356899999999999988775432        789999999999999999999999999994   456799999999875


Q ss_pred             CCCC-CCccceeeccceecccc
Q psy14897         78 VPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      .... ......+++..|.+||+
T Consensus       151 ~~~~~~~~~~~~g~~~y~aPE~  172 (324)
T cd05589         151 GMGFGDRTSTFCGTPEFLAPEV  172 (324)
T ss_pred             CCCCCCcccccccCccccCHhH
Confidence            4322 22234567888888885

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0582|consensus

Probab=99.66  E-value=2.6e-16  Score=102.59  Aligned_cols=90  Identities=27%  Similarity=0.378  Sum_probs=74.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch-----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK-----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~-----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      +..+|+||.||.+|++.+.++...           +.++++.||.|+|.+|.||||+|+.||+++   ..+.++++|||.
T Consensus        96 ~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~---~dG~VkLadFgv  172 (516)
T KOG0582|consen   96 DSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILID---SDGTVKLADFGV  172 (516)
T ss_pred             cceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEc---CCCcEEEcCcee
Confidence            467999999999999999987532           679999999999999999999999999995   667799999998


Q ss_pred             eecCCCCCCc-----cceeeccceecccc
Q psy14897         75 AKNVPSSPSY-----ERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~-----~~~~~t~~~~~~~~   98 (99)
                      +..+......     ..+++|+++.+||.
T Consensus       173 sa~l~~~G~R~~~rf~tfvgtp~wmAPEv  201 (516)
T KOG0582|consen  173 SASLFDSGDRQVTRFNTFVGTPCWMAPEV  201 (516)
T ss_pred             eeeecccCceeeEeeccccCcccccChHH
Confidence            8776544321     23477888888885

>KOG0591|consensus

Probab=99.66  E-value=2.1e-17  Score=102.92  Aligned_cols=87  Identities=23%  Similarity=0.248  Sum_probs=73.6

Q ss_pred             eEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhh--CC--eeecCcCCCcEEEeeCCCCCeEEEee
Q psy14897          9 SCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHS--RN--FIHRDIKPDNFLMGLGKRGNLVYIID   71 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~--~~--i~h~~l~~~~~l~~~~~~~~~~~l~d   71 (99)
                      +++||||+++|||...++.             .+++.|++.++..||.  ..  ++|||+||.|+++.   ....+|+.|
T Consensus        95 lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~---~~gvvKLGD  171 (375)
T KOG0591|consen   95 LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT---ANGVVKLGD  171 (375)
T ss_pred             hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc---CCCceeecc
Confidence            8899999999999998863             2278999999999998  44  99999999999995   556799999


Q ss_pred             ccceecCCCCCCc-cceeeccceecccc
Q psy14897         72 FGLAKNVPSSPSY-ERHVTTQTTRIGRI   98 (99)
Q Consensus        72 ~g~a~~~~~~~~~-~~~~~t~~~~~~~~   98 (99)
                      ||+++.+...... .+.+||.-|.+||+
T Consensus       172 fGL~r~l~s~~tfA~S~VGTPyYMSPE~  199 (375)
T KOG0591|consen  172 FGLGRFLSSKTTFAHSLVGTPYYMSPER  199 (375)
T ss_pred             chhHhHhcchhHHHHhhcCCCcccCHHH
Confidence            9999988765433 45689999999985

>KOG0614|consensus

Probab=99.66  E-value=5.5e-17  Score=107.53  Aligned_cols=93  Identities=22%  Similarity=0.338  Sum_probs=82.4

Q ss_pred             CCCC-CCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          3 PFRS-TQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         3 ~~~~-~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      .|++ +.+||+||-+-||++.+.|+.+.         ++.-++.+..|||+++|+.||++|+|++++   ...-+|+.||
T Consensus       488 Tfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd---~~Gy~KLVDF  564 (732)
T KOG0614|consen  488 TFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLD---NRGYLKLVDF  564 (732)
T ss_pred             HhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeec---cCCceEEeeh
Confidence            3444 45899999999999999998765         556689999999999999999999999995   6677999999


Q ss_pred             cceecCCCCCCccceeeccceecccc
Q psy14897         73 GLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |+|+.+....+.-++|||..|.+|||
T Consensus       565 GFAKki~~g~KTwTFcGTpEYVAPEI  590 (732)
T KOG0614|consen  565 GFAKKIGSGRKTWTFCGTPEYVAPEI  590 (732)
T ss_pred             hhHHHhccCCceeeecCCcccccchh
Confidence            99999999888889999999999997

>KOG0667|consensus

Probab=99.65  E-value=2.7e-16  Score=105.56  Aligned_cols=89  Identities=20%  Similarity=0.329  Sum_probs=73.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch-----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK-----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~-----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+.+|+|+|.++. +|.++++.++           ++.||+.+|.+||..+|||.|+||+||++.. .....+|++|||.
T Consensus       260 r~HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~-~~r~~vKVIDFGS  337 (586)
T KOG0667|consen  260 RNHLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKD-PKRSRIKVIDFGS  337 (586)
T ss_pred             ccceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeecc-CCcCceeEEeccc
Confidence            4678999999987 9999998654           7899999999999999999999999999953 3445799999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |........  .-+-++-|++||+
T Consensus       338 Sc~~~q~vy--tYiQSRfYRAPEV  359 (586)
T KOG0667|consen  338 SCFESQRVY--TYIQSRFYRAPEV  359 (586)
T ss_pred             ccccCCcce--eeeeccccccchh
Confidence            887655442  4566788999986

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=7.4e-16  Score=96.66  Aligned_cols=90  Identities=23%  Similarity=0.319  Sum_probs=72.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+.+++||||+.+|+|.+.+...           .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||+
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~~l~Dfg~  148 (285)
T cd05605          72 KDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLD---DYGHIRISDLGL  148 (285)
T ss_pred             CCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEEC---CCCCEEEeeCCC
Confidence            35689999999999998776321           1678999999999999999999999999994   445699999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +..+.........+++..|.+||+
T Consensus       149 ~~~~~~~~~~~~~~~~~~y~aPE~  172 (285)
T cd05605         149 AVEIPEGETIRGRVGTVGYMAPEV  172 (285)
T ss_pred             ceecCCCCccccccCCCCccCcHH
Confidence            987654444344567788888874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.65  E-value=4.8e-16  Score=98.95  Aligned_cols=90  Identities=23%  Similarity=0.291  Sum_probs=71.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|...+....         ++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||+++
T Consensus        68 ~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~  144 (318)
T cd05570          68 KDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLD---SEGHIKIADFGMCK  144 (318)
T ss_pred             CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEEC---CCCcEEecccCCCe
Confidence            356899999999999988775432         678999999999999999999999999994   45569999999987


Q ss_pred             cCCC-CCCccceeeccceecccc
Q psy14897         77 NVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      .... .......+++..|.+||+
T Consensus       145 ~~~~~~~~~~~~~g~~~y~aPE~  167 (318)
T cd05570         145 EGILGGVTTSTFCGTPDYIAPEI  167 (318)
T ss_pred             ecCcCCCcccceecCccccCHHH
Confidence            5322 222234567888888875

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.64  E-value=6.1e-16  Score=103.85  Aligned_cols=87  Identities=25%  Similarity=0.302  Sum_probs=70.9

Q ss_pred             eEEEEEeeCCCCchhhhccc-------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          9 SCLVFPYSYGTKSGEQISTG-------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~l~~~-------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +++||||+.+|+|.+.+..+             .++.|++.++.|+|+++++|+|++|.|+++.   ....+++.|||++
T Consensus       114 i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~---~~~~vkL~DFGls  190 (496)
T PTZ00283        114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC---SNGLVKLGDFGFS  190 (496)
T ss_pred             EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe---CCCCEEEEecccC
Confidence            67999999999999887532             1678999999999999999999999999995   4556999999999


Q ss_pred             ecCCCCC---Cccceeeccceecccc
Q psy14897         76 KNVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                      +.+....   .....+||..|.+||+
T Consensus       191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~  216 (496)
T PTZ00283        191 KMYAATVSDDVGRTFCGTPYYVAPEI  216 (496)
T ss_pred             eeccccccccccccccCCcceeCHHH
Confidence            8764321   2234578888999985

>KOG0695|consensus

Probab=99.64  E-value=7.1e-16  Score=98.62  Aligned_cols=90  Identities=20%  Similarity=0.317  Sum_probs=78.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +..+++|.||+.||+|.-.++.++         +..+|+.++.|||++||+.||++..|++++   ....+|+.|+|.++
T Consensus       323 esrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlld---aeghikltdygmck  399 (593)
T KOG0695|consen  323 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLD---AEGHIKLTDYGMCK  399 (593)
T ss_pred             cceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEc---cCCceeecccchhh
Confidence            457899999999999987776433         668899999999999999999999999994   66779999999998


Q ss_pred             c-CCCCCCccceeeccceecccc
Q psy14897         77 N-VPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~-~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      . +.++....++|||.-|.+|||
T Consensus       400 e~l~~gd~tstfcgtpnyiapei  422 (593)
T KOG0695|consen  400 EGLGPGDTTSTFCGTPNYIAPEI  422 (593)
T ss_pred             cCCCCCcccccccCCCcccchhh
Confidence            7 566777788999999999987

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.64  E-value=1.2e-15  Score=95.82  Aligned_cols=90  Identities=24%  Similarity=0.331  Sum_probs=72.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++||||+.+++|.+.+...           .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||+
T Consensus        72 ~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~---~~~~~~l~Dfg~  148 (285)
T cd05630          72 KDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD---DHGHIRISDLGL  148 (285)
T ss_pred             CCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEeeccc
Confidence            35689999999999998877421           2678999999999999999999999999994   455699999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +............+++..|.+||.
T Consensus       149 ~~~~~~~~~~~~~~g~~~y~aPE~  172 (285)
T cd05630         149 AVHVPEGQTIKGRVGTVGYMAPEV  172 (285)
T ss_pred             eeecCCCccccCCCCCccccChHH
Confidence            887654444344567777777774

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.63  E-value=1.1e-15  Score=95.60  Aligned_cols=90  Identities=27%  Similarity=0.341  Sum_probs=70.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      ....++||||+.+|+|...+..             ..++.|++.++.|+|+++++|+|+++.|+++.   ....+++.||
T Consensus        65 ~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~df  141 (280)
T cd05608          65 KTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLD---NDGNVRISDL  141 (280)
T ss_pred             CCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeC
Confidence            3568999999999999876521             12779999999999999999999999999994   4556899999


Q ss_pred             cceecCCCCCC-ccceeeccceecccc
Q psy14897         73 GLAKNVPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      |.+..+..... .....+|..|.+||.
T Consensus       142 g~~~~~~~~~~~~~~~~g~~~y~aPE~  168 (280)
T cd05608         142 GLAVELKDGQSKTKGYAGTPGFMAPEL  168 (280)
T ss_pred             ccceecCCCCccccccCCCcCccCHHH
Confidence            99987644322 223456777888874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.63  E-value=1.2e-15  Score=95.63  Aligned_cols=89  Identities=25%  Similarity=0.349  Sum_probs=71.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ...+++||||+. ++|.+++..           ..++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~---~~~~~kl~Dfg~  156 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGL  156 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEc---CCCCEEEccccc
Confidence            346899999997 478777643           22789999999999999999999999999994   456699999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ++............++..|.+||.
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~  180 (290)
T cd07862         157 ARIYSFQMALTSVVVTLWYRAPEV  180 (290)
T ss_pred             eEeccCCcccccccccccccChHH
Confidence            987655444445567888888874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.63  E-value=8.8e-16  Score=101.76  Aligned_cols=87  Identities=22%  Similarity=0.321  Sum_probs=68.2

Q ss_pred             eEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          9 SCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +++||||+.+ ++.+.+..             ..++.|++.|+.|||+++++|+|++|+|+++.  .....+++.|||++
T Consensus       142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~--~~~~~vkL~DFGla  218 (440)
T PTZ00036        142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLID--PNTHTLKLCDFGSA  218 (440)
T ss_pred             EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEc--CCCCceeeeccccc
Confidence            6789999986 56554431             12678999999999999999999999999994  33446899999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.+..........+|..|.+||+
T Consensus       219 ~~~~~~~~~~~~~~t~~y~aPE~  241 (440)
T PTZ00036        219 KNLLAGQRSVSYICSRFYRAPEL  241 (440)
T ss_pred             hhccCCCCcccCCCCcCccCHHH
Confidence            87765544445577888999985

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.63  E-value=1.6e-15  Score=95.16  Aligned_cols=90  Identities=26%  Similarity=0.332  Sum_probs=72.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++||||+.+++|.+.+...           .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||+
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~---~~~~~kl~Dfg~  148 (285)
T cd05632          72 KDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD---DYGHIRISDLGL  148 (285)
T ss_pred             CCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC---CCCCEEEecCCc
Confidence            45689999999999998776421           2778999999999999999999999999994   445699999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.............++..|.+||.
T Consensus       149 ~~~~~~~~~~~~~~g~~~~~aPE~  172 (285)
T cd05632         149 AVKIPEGESIRGRVGTVGYMAPEV  172 (285)
T ss_pred             ceecCCCCcccCCCCCcCccChHH
Confidence            877654444444567888888874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.63  E-value=1.2e-15  Score=98.29  Aligned_cols=90  Identities=23%  Similarity=0.375  Sum_probs=71.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-----chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-----GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS   80 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-----~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~   80 (99)
                      .+.+++||||+.+|+|.+....     ..++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||+++.+..
T Consensus       144 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~~~~kL~DfG~~~~~~~  220 (353)
T PLN00034        144 NGEIQVLLEFMDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN---SAKNVKIADFGVSRILAQ  220 (353)
T ss_pred             CCeEEEEEecCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEEEcccccceeccc
Confidence            4568999999999998764322     23789999999999999999999999999994   556699999999987643


Q ss_pred             CC-Cccceeeccceecccc
Q psy14897         81 SP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        81 ~~-~~~~~~~t~~~~~~~~   98 (99)
                      .. ......+|..|.+||+
T Consensus       221 ~~~~~~~~~gt~~y~aPE~  239 (353)
T PLN00034        221 TMDPCNSSVGTIAYMSPER  239 (353)
T ss_pred             ccccccccccCccccCccc
Confidence            32 2234567888888884

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.63  E-value=1.9e-15  Score=102.83  Aligned_cols=90  Identities=20%  Similarity=0.316  Sum_probs=71.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcE
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNF   56 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~   56 (99)
                      +...++||||+.+++|.+.+...                             .++.|++.++.|+|+++++|+|++|+|+
T Consensus       207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NI  286 (566)
T PLN03225        207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNI  286 (566)
T ss_pred             CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHE
Confidence            45789999999999998877532                             2678999999999999999999999999


Q ss_pred             EEeeCCCCCeEEEeeccceecCCCCCC--ccceeeccceeccc
Q psy14897         57 LMGLGKRGNLVYIIDFGLAKNVPSSPS--YERHVTTQTTRIGR   97 (99)
Q Consensus        57 l~~~~~~~~~~~l~d~g~a~~~~~~~~--~~~~~~t~~~~~~~   97 (99)
                      ++.  .....++++|||+++.+.....  ....+++..|.+||
T Consensus       287 Ll~--~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE  327 (566)
T PLN03225        287 IFS--EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPE  327 (566)
T ss_pred             EEe--CCCCcEEEEeCCCccccccccccCCcccccCCCccChH
Confidence            985  2345699999999986543221  23456777888887

>KOG0196|consensus

Probab=99.62  E-value=3.8e-16  Score=107.38  Aligned_cols=74  Identities=20%  Similarity=0.386  Sum_probs=65.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+.+++|.|||++|+|+++|+.+.          ..++|+.|++||.+++.+|||+...|+++   +....+|++|||++
T Consensus       702 s~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV---NsnLvCKVsDFGLS  778 (996)
T KOG0196|consen  702 SKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV---NSNLVCKVSDFGLS  778 (996)
T ss_pred             CceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee---ccceEEEeccccce
Confidence            456899999999999999998764          67999999999999999999999999999   45667999999999


Q ss_pred             ecCCCCC
Q psy14897         76 KNVPSSP   82 (99)
Q Consensus        76 ~~~~~~~   82 (99)
                      +.+.+.+
T Consensus       779 Rvledd~  785 (996)
T KOG0196|consen  779 RVLEDDP  785 (996)
T ss_pred             eecccCC
Confidence            9886554

>KOG4236|consensus

Probab=99.62  E-value=6.6e-16  Score=103.20  Aligned_cols=94  Identities=21%  Similarity=0.272  Sum_probs=76.7

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ..+.+++|||-+.|.-|.-.|...+          +..||+-++.|||.++|+|.|+||+|+++.....-..+|+.|||+
T Consensus       634 T~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGf  713 (888)
T KOG4236|consen  634 TPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGF  713 (888)
T ss_pred             CCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccc
Confidence            3467899999997744544444322          679999999999999999999999999997655556799999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |+.++...-....+||..|.+||.
T Consensus       714 ARiIgEksFRrsVVGTPAYLaPEV  737 (888)
T KOG4236|consen  714 ARIIGEKSFRRSVVGTPAYLAPEV  737 (888)
T ss_pred             eeecchhhhhhhhcCCccccCHHH
Confidence            999877665567789999999984

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.62  E-value=1.3e-15  Score=97.22  Aligned_cols=87  Identities=26%  Similarity=0.366  Sum_probs=68.9

Q ss_pred             CeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ..++||||+. ++|.+.+...         .++.|++.|+.|||+++++|+|+++.|+++.   ....++++|||+++..
T Consensus        78 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kL~Dfg~~~~~  153 (338)
T cd07859          78 DIYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILAN---ADCKLKICDFGLARVA  153 (338)
T ss_pred             eEEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCcEEEccCcccccc
Confidence            4799999996 5888877543         2789999999999999999999999999994   5566999999998765


Q ss_pred             CCCCC----ccceeeccceecccc
Q psy14897         79 PSSPS----YERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~~----~~~~~~t~~~~~~~~   98 (99)
                      .....    ....++|..|.+||+
T Consensus       154 ~~~~~~~~~~~~~~~t~~y~aPE~  177 (338)
T cd07859         154 FNDTPTAIFWTDYVATRWYRAPEL  177 (338)
T ss_pred             ccccCccccccCCCCCCCcCCHHH
Confidence            32211    133467888999985

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.61  E-value=2.3e-15  Score=95.04  Aligned_cols=90  Identities=23%  Similarity=0.374  Sum_probs=68.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEE
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFL   57 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l   57 (99)
                      .+..++||||+.+|+|.+++...                            .++.|++.++.|+|+.+++|+|+++.|++
T Consensus        91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nil  170 (304)
T cd05096          91 EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCL  170 (304)
T ss_pred             CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheE
Confidence            35689999999999999887432                            37899999999999999999999999999


Q ss_pred             EeeCCCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         58 MGLGKRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        58 ~~~~~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      +.   ....+++.|||+++.+......   ....++..|.+||.
T Consensus       171 l~---~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~  211 (304)
T cd05096         171 VG---ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWEC  211 (304)
T ss_pred             Ec---CCccEEECCCccceecccCceeEecCcCCCCccccCHHH
Confidence            94   4566999999999876443221   11223455666663

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.61  E-value=2.4e-15  Score=93.36  Aligned_cols=71  Identities=23%  Similarity=0.248  Sum_probs=60.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIID   71 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d   71 (99)
                      ....++||||+.+|+|.+++...              .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|
T Consensus        67 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl~d  143 (269)
T cd05042          67 SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLT---ADLSVKIGD  143 (269)
T ss_pred             CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEec---CCCcEEEec
Confidence            45689999999999999987532              2678999999999999999999999999994   455689999


Q ss_pred             ccceecCC
Q psy14897         72 FGLAKNVP   79 (99)
Q Consensus        72 ~g~a~~~~   79 (99)
                      ||++....
T Consensus       144 fg~~~~~~  151 (269)
T cd05042         144 YGLALEQY  151 (269)
T ss_pred             cccccccc
Confidence            99987643

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.61  E-value=2.2e-15  Score=94.32  Aligned_cols=89  Identities=24%  Similarity=0.332  Sum_probs=70.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+|+|.+++..+.         ++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||++.
T Consensus        69 ~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~---~~~~~~l~dfg~~~  145 (279)
T cd05633          69 PDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLAC  145 (279)
T ss_pred             CCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEEC---CCCCEEEccCCcce
Confidence            456899999999999988875432         789999999999999999999999999994   44568999999987


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ....... ....++..|.+||.
T Consensus       146 ~~~~~~~-~~~~~~~~y~aPE~  166 (279)
T cd05633         146 DFSKKKP-HASVGTHGYMAPEV  166 (279)
T ss_pred             eccccCc-cCcCCCcCccCHHH
Confidence            6543322 23456777777774

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG1026|consensus

Probab=99.61  E-value=1.1e-15  Score=105.15  Aligned_cols=77  Identities=30%  Similarity=0.537  Sum_probs=67.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch-----------------------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK-----------------------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGK   62 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~-----------------------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~   62 (99)
                      ++..+||||||.+|||.++|+.+.                       ++.||+.|+.||.++.++|||+.++|++++   
T Consensus       561 ~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVg---  637 (774)
T KOG1026|consen  561 GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVG---  637 (774)
T ss_pred             CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceec---
Confidence            467899999999999999996421                       789999999999999999999999999995   


Q ss_pred             CCCeEEEeeccceecCCCCCCcc
Q psy14897         63 RGNLVYIIDFGLAKNVPSSPSYE   85 (99)
Q Consensus        63 ~~~~~~l~d~g~a~~~~~~~~~~   85 (99)
                      ....+|++|||+++.+.....|.
T Consensus       638 e~l~VKIsDfGLsRdiYssDYYk  660 (774)
T KOG1026|consen  638 ENLVVKISDFGLSRDIYSSDYYK  660 (774)
T ss_pred             cceEEEecccccchhhhhhhhhc
Confidence            56779999999999987776663

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.60  E-value=3.5e-15  Score=94.27  Aligned_cols=89  Identities=28%  Similarity=0.415  Sum_probs=68.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ....++||||+. +++.+.+..+          .++.|++.|+.|+|+++++|+|++|+|+++.   ....+++.|||.+
T Consensus        75 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~  150 (303)
T cd07869          75 KETLTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS---DTGELKLADFGLA  150 (303)
T ss_pred             CCeEEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECCCCcc
Confidence            356899999996 5776666432          2789999999999999999999999999994   4556999999998


Q ss_pred             ecCCCC-CCccceeeccceecccc
Q psy14897         76 KNVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      ...... .......++..|.+||+
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~aPE~  174 (303)
T cd07869         151 RAKSVPSHTYSNEVVTLWYRPPDV  174 (303)
T ss_pred             eeccCCCccCCCCcccCCCCChHH
Confidence            764322 22234567788888884

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.60  E-value=3.7e-15  Score=93.64  Aligned_cols=89  Identities=26%  Similarity=0.395  Sum_probs=69.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+ +|.+.+...          .++.|++.|+.|+|+++++|+|++|+|+++.   ....+++.|||++
T Consensus        75 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~DfG~~  150 (288)
T cd07871          75 ERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN---EKGELKLADFGLA  150 (288)
T ss_pred             CCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEECcCcce
Confidence            3468999999985 887776432          2678999999999999999999999999994   4556999999998


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +...... ......++..|.+||+
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~aPE~  174 (288)
T cd07871         151 RAKSVPTKTYSNEVVTLWYRPPDV  174 (288)
T ss_pred             eeccCCCccccCceecccccChHH
Confidence            7654322 2234467788888874

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0608|consensus

Probab=99.59  E-value=3.5e-15  Score=101.41  Aligned_cols=70  Identities=31%  Similarity=0.457  Sum_probs=61.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+++|+||||+.|||+.+.|..-.         ++.++..++.+.|..|+||||+|+.||+++   ....+|+.|||+|.
T Consensus       701 kdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILID---rdGHIKLTDFGLCT  777 (1034)
T KOG0608|consen  701 KDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCT  777 (1034)
T ss_pred             CCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEc---cCCceeeeeccccc
Confidence            468999999999999999886432         678899999999999999999999999994   67779999999986


Q ss_pred             cC
Q psy14897         77 NV   78 (99)
Q Consensus        77 ~~   78 (99)
                      -+
T Consensus       778 Gf  779 (1034)
T KOG0608|consen  778 GF  779 (1034)
T ss_pred             cc
Confidence            44

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.59  E-value=5.8e-15  Score=92.35  Aligned_cols=89  Identities=22%  Similarity=0.279  Sum_probs=70.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+...         .++.|++.++.|+|+.+++|+|+++.|+++.   ....++++|||.+.
T Consensus        69 ~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~---~~~~~kl~dfg~~~  145 (278)
T cd05606          69 PDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLAC  145 (278)
T ss_pred             CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC---CCCCEEEccCcCcc
Confidence            35689999999999998877543         2789999999999999999999999999995   44569999999987


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+..... ....++..|.+||.
T Consensus       146 ~~~~~~~-~~~~~~~~y~aPE~  166 (278)
T cd05606         146 DFSKKKP-HASVGTHGYMAPEV  166 (278)
T ss_pred             ccCccCC-cCcCCCcCCcCcHH
Confidence            6543322 23456777777764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.59  E-value=5.8e-15  Score=94.47  Aligned_cols=89  Identities=18%  Similarity=0.300  Sum_probs=71.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhC-CeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSR-NFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~-~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+|+|.+++...         .++.|++.++.|+|+. +++|+|+++.|+++.   ....+++.|||++
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~  151 (331)
T cd06649          75 DGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN---SRGEIKLCDFGVS  151 (331)
T ss_pred             CCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc---CCCcEEEccCccc
Confidence            45689999999999999988642         3678999999999986 699999999999994   4556999999998


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ..+.... .....++..|.+||+
T Consensus       152 ~~~~~~~-~~~~~g~~~y~aPE~  173 (331)
T cd06649         152 GQLIDSM-ANSFVGTRSYMSPER  173 (331)
T ss_pred             ccccccc-cccCCCCcCcCCHhH
Confidence            8764332 233467788888875

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.59  E-value=9e-15  Score=90.93  Aligned_cols=89  Identities=17%  Similarity=0.204  Sum_probs=67.2

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      ...++||||+.+|+|.+++...             .++.|++.|+.|+|+.+++|+|+++.|+++.   ....+++.|||
T Consensus        68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~---~~~~~~l~Dfg  144 (268)
T cd05086          68 IPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLT---SDLTVKVGDYG  144 (268)
T ss_pred             CccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEc---CCccEEecccc
Confidence            5679999999999999888642             2578999999999999999999999999994   45569999999


Q ss_pred             ceecCCCCC---Cccceeeccceecccc
Q psy14897         74 LAKNVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                      ++.......   .....+++..|.+||+
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~  172 (268)
T cd05086         145 IGPSRYKEDYIETEDDKCVPLRWLAPEL  172 (268)
T ss_pred             cccccCcchhhhcccCCcCcccccCchh
Confidence            876432111   1122345556666764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.58  E-value=6.3e-15  Score=92.22  Aligned_cols=90  Identities=27%  Similarity=0.430  Sum_probs=69.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc---------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST---------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~---------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.++.+......         ..++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||++.
T Consensus        72 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~---~~~~~kl~Dfg~~~  148 (287)
T cd07848          72 RGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS---HNDVLKLCDFGFAR  148 (287)
T ss_pred             CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEEeeccCcc
Confidence            3568999999998766554332         22789999999999999999999999999994   45569999999998


Q ss_pred             cCCCCC--Cccceeeccceecccc
Q psy14897         77 NVPSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      .+....  ......++..|.+||+
T Consensus       149 ~~~~~~~~~~~~~~~~~~y~aPE~  172 (287)
T cd07848         149 NLSEGSNANYTEYVATRWYRSPEL  172 (287)
T ss_pred             cccccccccccccccccccCCcHH
Confidence            764332  2233467888888874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0662|consensus

Probab=99.58  E-value=9.8e-16  Score=90.77  Aligned_cols=90  Identities=26%  Similarity=0.397  Sum_probs=72.6

Q ss_pred             CCCCeEEEEEeeCCCCchhhhc----------cchHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQIS----------TGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~----------~~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      +++++.+||||+.. +|..+..          .+.++.|++.|+.|+|++++.|||++|.|+++   .....+|++|||+
T Consensus        72 sdkkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---n~ngelkladfgl  147 (292)
T KOG0662|consen   72 SDKKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---NRNGELKLADFGL  147 (292)
T ss_pred             cCceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---ccCCcEEecccch
Confidence            56788999999975 4444332          23488999999999999999999999999999   4556699999999


Q ss_pred             eecCCCCC-Cccceeeccceecccc
Q psy14897         75 AKNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ++-+.-.. .+..-+.|.||++|..
T Consensus       148 arafgipvrcysaevvtlwyrppdv  172 (292)
T KOG0662|consen  148 ARAFGIPVRCYSAEVVTLWYRPPDV  172 (292)
T ss_pred             hhhcCCceEeeeceeeeeeccCcce
Confidence            99886554 4566688999999864

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.58  E-value=6.4e-15  Score=95.25  Aligned_cols=88  Identities=25%  Similarity=0.314  Sum_probs=69.5

Q ss_pred             CCeEEEEEeeCCCCchhhhcc-------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST-------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~-------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      ...++||||+.+ ++.+.+..       ..++.|++.++.|+|+++++|+|+++.|+++.   ....++++|||+++...
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a~~~~  177 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLARTAG  177 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEEC---CCCcEEEEeCCCccccC
Confidence            357999999976 55554432       23789999999999999999999999999994   45669999999998765


Q ss_pred             CCCCccceeeccceecccc
Q psy14897         80 SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        80 ~~~~~~~~~~t~~~~~~~~   98 (99)
                      .........+|..|.+||+
T Consensus       178 ~~~~~~~~~~t~~y~aPE~  196 (364)
T cd07875         178 TSFMMTPYVVTRYYRAPEV  196 (364)
T ss_pred             CCCcccCCcccCCcCCHHH
Confidence            5444445577888888885

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0194|consensus

Probab=99.58  E-value=2.3e-15  Score=99.81  Aligned_cols=70  Identities=30%  Similarity=0.442  Sum_probs=61.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ...+++|||++.||+|.++|+..+          ++.+.+.|+.|||+++++|||+..+|+++.   ....+|++|||++
T Consensus       233 ~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~---~~~~vKISDFGLs  309 (474)
T KOG0194|consen  233 EEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYS---KKGVVKISDFGLS  309 (474)
T ss_pred             CCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheec---CCCeEEeCccccc
Confidence            457899999999999999998643          789999999999999999999999999994   5556899999998


Q ss_pred             ecC
Q psy14897         76 KNV   78 (99)
Q Consensus        76 ~~~   78 (99)
                      +.-
T Consensus       310 ~~~  312 (474)
T KOG0194|consen  310 RAG  312 (474)
T ss_pred             cCC
Confidence            753

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.58  E-value=9.8e-15  Score=89.87  Aligned_cols=89  Identities=15%  Similarity=0.153  Sum_probs=67.6

Q ss_pred             CCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCC----CCCeEEEeec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGK----RGNLVYIIDF   72 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~----~~~~~~l~d~   72 (99)
                      ...++||||+.+|+|.+++....          ++.|++.++.|+|+++++|+|+++.|+++....    ....+++.||
T Consensus        73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df  152 (259)
T cd05037          73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP  152 (259)
T ss_pred             CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCC
Confidence            46789999999999999886422          678999999999999999999999999995222    1125899999


Q ss_pred             cceecCCCCCCccceeeccceecccc
Q psy14897         73 GLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |.+......   ....++..|.+||+
T Consensus       153 g~a~~~~~~---~~~~~~~~y~aPE~  175 (259)
T cd05037         153 GIPITVLSR---EERVERIPWIAPEC  175 (259)
T ss_pred             Ccccccccc---cccccCCCccChhh
Confidence            998875432   12334455666664

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG1035|consensus

Probab=99.58  E-value=2.3e-15  Score=106.98  Aligned_cols=89  Identities=28%  Similarity=0.382  Sum_probs=72.5

Q ss_pred             CCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ..+|+-|||++...+...++.+.          ++++|+.|+.|+|.++++|||+||.||+++   ....+|+.|||+|.
T Consensus       669 ~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd---~~~~VKIGDFGLAt  745 (1351)
T KOG1035|consen  669 LILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLD---SRNSVKIGDFGLAT  745 (1351)
T ss_pred             eEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEc---CCCCeeecccccch
Confidence            35899999999977777665432          689999999999999999999999999995   55569999999987


Q ss_pred             cC-------------------CCCCCccceeeccceecccc
Q psy14897         77 NV-------------------PSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~-------------------~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ..                   .+.+..+..+||..|.+||+
T Consensus       746 ~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEl  786 (1351)
T KOG1035|consen  746 DLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPEL  786 (1351)
T ss_pred             hhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHH
Confidence            61                   11124466799999999997

>KOG0610|consensus

Probab=99.58  E-value=9.9e-15  Score=94.52  Aligned_cols=70  Identities=26%  Similarity=0.441  Sum_probs=61.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch-----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK-----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~-----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++-.|+||||+.||+|...++.+.           |+.+++.||+|||-.||+.||+||+|+++.   ..+.+-+.||.+
T Consensus       149 ~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvr---edGHIMLsDFDL  225 (459)
T KOG0610|consen  149 DKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVR---EDGHIMLSDFDL  225 (459)
T ss_pred             cceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEe---cCCcEEeeeccc
Confidence            456899999999999999887543           789999999999999999999999999994   566789999998


Q ss_pred             eecC
Q psy14897         75 AKNV   78 (99)
Q Consensus        75 a~~~   78 (99)
                      +...
T Consensus       226 S~~~  229 (459)
T KOG0610|consen  226 SLRC  229 (459)
T ss_pred             cccC
Confidence            7654

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.57  E-value=9.5e-15  Score=94.43  Aligned_cols=88  Identities=22%  Similarity=0.389  Sum_probs=69.5

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++||||+. ++|.+++..+          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+.
T Consensus       130 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~  205 (357)
T PHA03209        130 AITCMVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIN---DVDQVCIGDLGAAQ  205 (357)
T ss_pred             CeeEEEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEecCcccc
Confidence            45789999996 4787776432          2789999999999999999999999999994   45568999999987


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ............+|..|.+||+
T Consensus       206 ~~~~~~~~~~~~gt~~y~aPE~  227 (357)
T PHA03209        206 FPVVAPAFLGLAGTVETNAPEV  227 (357)
T ss_pred             ccccCcccccccccccccCCee
Confidence            6544433344567888888875

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.57  E-value=9.2e-15  Score=89.97  Aligned_cols=90  Identities=24%  Similarity=0.453  Sum_probs=73.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ....++||||+.+++|.+++...         .++.|++.++.++|+++++|+|+++.|+++.   ....+++.|||.+.
T Consensus        70 ~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~---~~~~~~l~Dfg~~~  146 (260)
T PF00069_consen   70 DNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD---ENGEVKLIDFGSSV  146 (260)
T ss_dssp             SSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES---TTSEEEESSGTTTE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccc
Confidence            45688999999999999888722         2789999999999999999999999999994   56678999999987


Q ss_pred             cC-CCCCCccceeeccceecccc
Q psy14897         77 NV-PSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~-~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .. ..........++..|.+||+
T Consensus       147 ~~~~~~~~~~~~~~~~~y~aPE~  169 (260)
T PF00069_consen  147 KLSENNENFNPFVGTPEYMAPEV  169 (260)
T ss_dssp             ESTSTTSEBSSSSSSGGGSCHHH
T ss_pred             ccccccccccccccccccccccc
Confidence            64 22333345567888888875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.57  E-value=8e-15  Score=94.66  Aligned_cols=87  Identities=25%  Similarity=0.310  Sum_probs=68.1

Q ss_pred             CeEEEEEeeCCCCchhhhcc-------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCC
Q psy14897          8 QSCLVFPYSYGTKSGEQIST-------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS   80 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~-------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~   80 (99)
                      ..++||||+.+ ++.+.+..       ..++.|++.++.|||+++++|+|++++|+++.   ....+++.|||+++....
T Consensus       100 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~---~~~~~kl~Dfg~a~~~~~  175 (359)
T cd07876         100 DVYLVMELMDA-NLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLARTACT  175 (359)
T ss_pred             eeEEEEeCCCc-CHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEecCCCcccccc
Confidence            47999999986 45443321       23789999999999999999999999999994   456699999999987654


Q ss_pred             CCCccceeeccceecccc
Q psy14897         81 SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        81 ~~~~~~~~~t~~~~~~~~   98 (99)
                      ........+|..|.+||+
T Consensus       176 ~~~~~~~~~t~~y~aPE~  193 (359)
T cd07876         176 NFMMTPYVVTRYYRAPEV  193 (359)
T ss_pred             CccCCCCcccCCCCCchh
Confidence            443445577888888885

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.57  E-value=1.2e-14  Score=90.30  Aligned_cols=90  Identities=21%  Similarity=0.183  Sum_probs=68.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIID   71 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d   71 (99)
                      ....++||||+.+|+|.+++...              .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|
T Consensus        67 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~---~~~~~kL~d  143 (269)
T cd05087          67 VTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT---ADLTVKIGD  143 (269)
T ss_pred             CCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEECC
Confidence            35679999999999999887531              2678999999999999999999999999994   456699999


Q ss_pred             ccceecCCCCCCc---cceeeccceecccc
Q psy14897         72 FGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        72 ~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      ||.+........+   ....++..|.+||+
T Consensus       144 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  173 (269)
T cd05087         144 YGLSHNKYKEDYYVTPDQLWVPLRWIAPEL  173 (269)
T ss_pred             ccccccccCcceeecCCCcCCcccccCHhH
Confidence            9998754332211   12234555677764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0607|consensus

Probab=99.57  E-value=8.5e-15  Score=92.94  Aligned_cols=94  Identities=24%  Similarity=0.357  Sum_probs=72.1

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+.++|+|||-|.||+|.+.+..++         +...|+.++.|||.++|.|||++|+|++-.......-+|+.||.++
T Consensus       147 dd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLg  226 (463)
T KOG0607|consen  147 DDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLG  226 (463)
T ss_pred             ccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccc
Confidence            3467999999999999999987654         5677999999999999999999999998755555556899999887


Q ss_pred             ecCCCC--------CCccceeeccceecccc
Q psy14897         76 KNVPSS--------PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~--------~~~~~~~~t~~~~~~~~   98 (99)
                      .-+...        +...+-+|+..|.+||.
T Consensus       227 Sg~k~~~~~spastP~L~tPvGSAEfMAPEV  257 (463)
T KOG0607|consen  227 SGIKLNNDCSPASTPELLTPVGSAEFMAPEV  257 (463)
T ss_pred             cccccCCCCCCCCCccccCcccchhhcchhH
Confidence            654222        22233356666667764

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.57  E-value=9.1e-15  Score=91.46  Aligned_cols=88  Identities=27%  Similarity=0.425  Sum_probs=70.2

Q ss_pred             CCeEEEEEeeCCCCchhhhcc-----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST-----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~-----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ...++||||+.+ ++.+.+..           ..++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||++
T Consensus        80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~kl~dfg~~  155 (288)
T cd07863          80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGQVKLADFGLA  155 (288)
T ss_pred             ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECccCcc
Confidence            357999999985 77776643           22779999999999999999999999999994   4556999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.+..........++..|.+||.
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~  178 (288)
T cd07863         156 RIYSCQMALTPVVVTLWYRAPEV  178 (288)
T ss_pred             ccccCcccCCCccccccccCchH
Confidence            87655444445567888888884

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG1989|consensus

Probab=99.57  E-value=2.7e-15  Score=103.23  Aligned_cols=88  Identities=25%  Similarity=0.293  Sum_probs=70.1

Q ss_pred             CeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCC--eeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRN--FIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~--i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++.+.|||+.+|.|-+++..+           +++.+++.|+.+||...  +||||+|.+|+|+.   .....|++|||.
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls---~~g~~KLCDFGS  192 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS---ADGNYKLCDFGS  192 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc---CCCCEEeCcccc
Confidence            578999999999999998753           28899999999999987  99999999999994   556799999998


Q ss_pred             eecCCCCCCcc----------ceeeccceecccc
Q psy14897         75 AKNVPSSPSYE----------RHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~----------~~~~t~~~~~~~~   98 (99)
                      +......+...          ....|..|++||+
T Consensus       193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEM  226 (738)
T KOG1989|consen  193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEM  226 (738)
T ss_pred             cccccCCCccHHHHHHHHHHHHhhCCccccChHH
Confidence            76644333111          1134788999985

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.57  E-value=1.1e-14  Score=94.77  Aligned_cols=66  Identities=26%  Similarity=0.409  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCCCCcc---ceeeccceecccc
Q psy14897         30 EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYE---RHVTTQTTRIGRI   98 (99)
Q Consensus        30 ~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~~~---~~~~t~~~~~~~~   98 (99)
                      ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++.+.......   ...++..|.+||.
T Consensus       217 i~~qi~~aL~yLH~~giiHrDLkp~Nil~~---~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~  285 (374)
T cd05106         217 FSSQVAQGMDFLASKNCIHRDVAARNVLLT---DGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPES  285 (374)
T ss_pred             HHHHHHHHHHHHHHCCEEeccCchheEEEe---CCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHH
Confidence            678999999999999999999999999995   45669999999998764332111   1112345777763

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.57  E-value=9.6e-15  Score=93.62  Aligned_cols=89  Identities=19%  Similarity=0.306  Sum_probs=70.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhC-CeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSR-NFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~-~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+|+|.+++...         .++.|++.++.|+|+. +++|+|+++.|+++.   ....+++.|||++
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~  151 (333)
T cd06650          75 DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVS  151 (333)
T ss_pred             CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc---CCCCEEEeeCCcc
Confidence            45789999999999999988642         2678999999999975 799999999999994   4456999999998


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ..+.... .....++..|.+||+
T Consensus       152 ~~~~~~~-~~~~~~~~~y~aPE~  173 (333)
T cd06650         152 GQLIDSM-ANSFVGTRSYMSPER  173 (333)
T ss_pred             hhhhhhc-cccCCCCccccCHHH
Confidence            7654322 123457778888874

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.57  E-value=6.3e-15  Score=94.98  Aligned_cols=88  Identities=26%  Similarity=0.319  Sum_probs=69.5

Q ss_pred             CCeEEEEEeeCCCCchhhhcc-------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST-------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~-------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      ...++||||+.+ ++.+.+..       ..++.|++.|+.|+|+++++|+|++++|+++.   ....+++.|||+++...
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~---~~~~~kl~Dfg~~~~~~  170 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLARTAG  170 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEC---CCCCEEEeeCcccccCC
Confidence            357999999976 55544432       23789999999999999999999999999994   45569999999998765


Q ss_pred             CCCCccceeeccceecccc
Q psy14897         80 SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        80 ~~~~~~~~~~t~~~~~~~~   98 (99)
                      .........+|..|.+||+
T Consensus       171 ~~~~~~~~~~t~~y~aPE~  189 (355)
T cd07874         171 TSFMMTPYVVTRYYRAPEV  189 (355)
T ss_pred             CccccCCccccCCccCHHH
Confidence            5444455678888998885

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.57  E-value=1.2e-14  Score=94.52  Aligned_cols=66  Identities=24%  Similarity=0.387  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCCCCccc---eeeccceecccc
Q psy14897         30 EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER---HVTTQTTRIGRI   98 (99)
Q Consensus        30 ~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~~~~---~~~t~~~~~~~~   98 (99)
                      ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++.+........   ..++..|.+||.
T Consensus       219 ~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~  287 (375)
T cd05104         219 FSYQVAKGMSFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPES  287 (375)
T ss_pred             HHHHHHHHHHHHHHCCeeccCCchhhEEEE---CCCcEEEecCccceeccCcccccccCCCCCCcceeChhH
Confidence            567999999999999999999999999995   455689999999987644332111   112344777763

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.56  E-value=1.5e-14  Score=88.66  Aligned_cols=88  Identities=19%  Similarity=0.239  Sum_probs=67.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+...         .++.|++.++.|+|+++++|+|++|.|+++.   ....+++.|||.+.
T Consensus        57 ~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~df~~~~  133 (237)
T cd05576          57 EDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD---DRGHIQLTYFSRWS  133 (237)
T ss_pred             CCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEecccchh
Confidence            35789999999999998887542         2778999999999999999999999999995   44568999999876


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ......  ....++..|.+||.
T Consensus       134 ~~~~~~--~~~~~~~~y~aPE~  153 (237)
T cd05576         134 EVEDSC--DGEAVENMYCAPEV  153 (237)
T ss_pred             cccccc--ccCCcCccccCCcc
Confidence            554322  22334455666663

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.56  E-value=1.5e-14  Score=93.87  Aligned_cols=72  Identities=25%  Similarity=0.282  Sum_probs=59.5

Q ss_pred             CCeEEEEEeeCCCCchhhhc--cchHHHHHHHHHHHHhhCCeeecCc-CCCcEEEeeCCCCCeEEEeeccceecCCCC
Q psy14897          7 TQSCLVFPYSYGTKSGEQIS--TGKEDREWIGRIDYIHSRNFIHRDI-KPDNFLMGLGKRGNLVYIIDFGLAKNVPSS   81 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~--~~~~~~~i~~~l~~lh~~~i~h~~l-~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~   81 (99)
                      +..++||||+.|++|.....  ...++.|++.++.++|+.+++|+|+ +|.|+++.   ....+++.|||+|+.+...
T Consensus        91 ~~~~LVmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~---~~~~ikLiDFGlA~~~~~~  165 (365)
T PRK09188         91 GKDGLVRGWTEGVPLHLARPHGDPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG---PDGEAAVIDFQLASVFRRR  165 (365)
T ss_pred             CCcEEEEEccCCCCHHHhCccchHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc---CCCCEEEEECccceecccC
Confidence            56899999999999974321  2358899999999999999999999 99999994   3456899999999976543

>PHA02988 hypothetical protein; Provisional

Probab=99.56  E-value=1.4e-14  Score=90.97  Aligned_cols=87  Identities=17%  Similarity=0.160  Sum_probs=70.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++||||+.+|+|.+.+..++         ++.+++.++.++|+ .+++|+|+++.|+++.   ....+++.|||+++
T Consensus        95 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~---~~~~~kl~dfg~~~  171 (283)
T PHA02988         95 PRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVT---ENYKLKIICHGLEK  171 (283)
T ss_pred             CceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEEC---CCCcEEEcccchHh
Confidence            46899999999999999986532         77899999999998 4889999999999995   45669999999988


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+....  ....++..|.+||+
T Consensus       172 ~~~~~~--~~~~~~~~y~aPE~  191 (283)
T PHA02988        172 ILSSPP--FKNVNFMVYFSYKM  191 (283)
T ss_pred             hhcccc--ccccCcccccCHHH
Confidence            664432  23456677777775

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.56  E-value=2.6e-14  Score=88.98  Aligned_cols=88  Identities=20%  Similarity=0.274  Sum_probs=69.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.++++.+.         ++.|++.++.++|+.+++|+|+++.|+++.  .....+++.|||.+.
T Consensus        81 ~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~--~~~~~~~l~dfg~~~  158 (267)
T PHA03390         81 LKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYD--RAKDRIYLCDYGLCK  158 (267)
T ss_pred             CCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEe--CCCCeEEEecCccce
Confidence            457899999999999999886542         789999999999999999999999999995  233269999999988


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ......   ...++..|.+||.
T Consensus       159 ~~~~~~---~~~~~~~y~aPE~  177 (267)
T PHA03390        159 IIGTPS---CYDGTLDYFSPEK  177 (267)
T ss_pred             ecCCCc---cCCCCCcccChhh
Confidence            764332   2345666667763

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.55  E-value=1.8e-14  Score=94.36  Aligned_cols=88  Identities=26%  Similarity=0.359  Sum_probs=68.8

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ...++|||++. ++|.+.+...         .++.|++.|+.|+|+++++|+|++|.|+++.   ....+++.|||++..
T Consensus       156 ~~~~lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~---~~~~vkL~DFG~a~~  231 (391)
T PHA03212        156 KFTCLILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN---HPGDVCLGDFGAACF  231 (391)
T ss_pred             CeeEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc---CCCCEEEEeCCcccc
Confidence            45789999986 5787776532         2779999999999999999999999999994   445689999999875


Q ss_pred             CCCC--CCccceeeccceecccc
Q psy14897         78 VPSS--PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~--~~~~~~~~t~~~~~~~~   98 (99)
                      ....  ......++|..|.+||+
T Consensus       232 ~~~~~~~~~~~~~gt~~y~aPE~  254 (391)
T PHA03212        232 PVDINANKYYGWAGTIATNAPEL  254 (391)
T ss_pred             cccccccccccccCccCCCChhh
Confidence            4322  22234578888999885

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.55  E-value=2.2e-14  Score=91.03  Aligned_cols=92  Identities=25%  Similarity=0.282  Sum_probs=69.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc------------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC-CCCCe
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST------------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG-KRGNL   66 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~------------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~-~~~~~   66 (99)
                      +...++||||+.+ +|.+.+..                  ..++.|++.|+.|||+++++|+|++++|+++... .....
T Consensus        72 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~  150 (317)
T cd07868          72 DRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR  150 (317)
T ss_pred             CcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCc
Confidence            3457899999875 66665431                  2378999999999999999999999999998421 23456


Q ss_pred             EEEeeccceecCCCCC----Cccceeeccceecccc
Q psy14897         67 VYIIDFGLAKNVPSSP----SYERHVTTQTTRIGRI   98 (99)
Q Consensus        67 ~~l~d~g~a~~~~~~~----~~~~~~~t~~~~~~~~   98 (99)
                      +++.|||+++.+....    ......+|..|.+||+
T Consensus       151 ~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~  186 (317)
T cd07868         151 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPEL  186 (317)
T ss_pred             EEEeecCceeccCCCCccccccCCccccccccCCHH
Confidence            9999999998764322    2234567888999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.55  E-value=2.1e-14  Score=90.14  Aligned_cols=88  Identities=25%  Similarity=0.386  Sum_probs=70.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+++|.+.+....         ++.|++.++.++|+.+++|+++++.|+++.   ....+++.|||++.
T Consensus        73 ~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~dfg~~~  149 (290)
T cd05580          73 DSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD---SDGYIKITDFGFAK  149 (290)
T ss_pred             CCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---CCCCEEEeeCCCcc
Confidence            456899999999999998875432         678999999999999999999999999994   44568999999988


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ......  ...+++..|.+||.
T Consensus       150 ~~~~~~--~~~~~~~~y~aPE~  169 (290)
T cd05580         150 RVKGRT--YTLCGTPEYLAPEI  169 (290)
T ss_pred             ccCCCC--CCCCCCccccChhh
Confidence            765442  23456667777764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.55  E-value=2.8e-14  Score=89.04  Aligned_cols=90  Identities=24%  Similarity=0.432  Sum_probs=70.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      ....+++|||+.+|+|.+++...                         .++.|++.++.|||+++++|+|+++.|+++. 
T Consensus        80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~-  158 (283)
T cd05048          80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG-  158 (283)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc-
Confidence            35689999999999999888542                         2789999999999999999999999999994 


Q ss_pred             CCCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         61 GKRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                        ....+++.|||++.........   ....++..|.+||.
T Consensus       159 --~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  197 (283)
T cd05048         159 --EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEA  197 (283)
T ss_pred             --CCCcEEECCCcceeeccccccccccCCCcccccccCHHH
Confidence              4556899999998865433211   22244566777774

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.55  E-value=2.7e-14  Score=88.29  Aligned_cols=89  Identities=11%  Similarity=0.119  Sum_probs=67.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCC-----CCeEEEe
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKR-----GNLVYII   70 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~-----~~~~~l~   70 (99)
                      +...++||||+.+|+|.+++..+.          ++.|++.++.|+|+++++|+|+++.|+++..+..     ...+++.
T Consensus        71 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~  150 (258)
T cd05078          71 GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLS  150 (258)
T ss_pred             CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEec
Confidence            356899999999999999886432          6799999999999999999999999999952211     1237899


Q ss_pred             eccceecCCCCCCccceeeccceeccc
Q psy14897         71 DFGLAKNVPSSPSYERHVTTQTTRIGR   97 (99)
Q Consensus        71 d~g~a~~~~~~~~~~~~~~t~~~~~~~   97 (99)
                      |||.+.......   ...++..|.+||
T Consensus       151 d~g~~~~~~~~~---~~~~~~~y~aPE  174 (258)
T cd05078         151 DPGISITVLPKE---ILLERIPWVPPE  174 (258)
T ss_pred             ccccccccCCch---hccccCCccCch
Confidence            999887654332   234455566665

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.55  E-value=2e-14  Score=99.52  Aligned_cols=72  Identities=32%  Similarity=0.498  Sum_probs=61.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc---------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST---------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~---------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+++..         ..++.|++.+|.|||.++++|+|+++.|+++.   ....+++.|||+++
T Consensus        76 ~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~---~~g~vkL~DFGls~  152 (669)
T cd05610          76 ANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLIS---NEGHIKLTDFGLSK  152 (669)
T ss_pred             CCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEc---CCCCEEEEeCCCCc
Confidence            3568999999999999988753         23789999999999999999999999999995   44569999999998


Q ss_pred             cCCC
Q psy14897         77 NVPS   80 (99)
Q Consensus        77 ~~~~   80 (99)
                      ....
T Consensus       153 ~~~~  156 (669)
T cd05610         153 VTLN  156 (669)
T ss_pred             cccC
Confidence            6543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0596|consensus

Probab=99.55  E-value=1.6e-14  Score=96.52  Aligned_cols=90  Identities=20%  Similarity=0.295  Sum_probs=74.1

Q ss_pred             CCCCCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          3 PFRSTQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         3 ~~~~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      +..++.+||||||=+. ||..+|+.+.          +-.|++.+++++|..+|+|.|++|.|+++    ..+.+|++||
T Consensus       429 Ev~d~~lYmvmE~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl----VkG~LKLIDF  503 (677)
T KOG0596|consen  429 EVTDGYLYMVMECGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL----VKGRLKLIDF  503 (677)
T ss_pred             eccCceEEEEeecccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE----EeeeEEeeee
Confidence            4456789999998665 8888887643          56899999999999999999999999998    4567999999


Q ss_pred             cceecCCCCCCc---cceeeccceeccc
Q psy14897         73 GLAKNVPSSPSY---ERHVTTQTTRIGR   97 (99)
Q Consensus        73 g~a~~~~~~~~~---~~~~~t~~~~~~~   97 (99)
                      |.|..+......   ...+||.-|.+||
T Consensus       504 GIA~aI~~DTTsI~kdsQvGT~NYMsPE  531 (677)
T KOG0596|consen  504 GIANAIQPDTTSIVKDSQVGTVNYMSPE  531 (677)
T ss_pred             chhcccCccccceeeccccCcccccCHH
Confidence            999988665432   4558888888887

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.55  E-value=3e-14  Score=87.56  Aligned_cols=91  Identities=24%  Similarity=0.295  Sum_probs=72.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++||||+.+++|.+++...           .++.|++.++.++|+++++|+|+++.|+++.  .....+++.|||.
T Consensus        71 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~--~~~~~~~l~d~~~  148 (256)
T cd08220          71 DKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD--KHKMVVKIGDFGI  148 (256)
T ss_pred             CCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEccCCC
Confidence            45689999999999999887542           1678999999999999999999999999995  3445689999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.............++..|.+||.
T Consensus       149 ~~~~~~~~~~~~~~~~~~y~aPE~  172 (256)
T cd08220         149 SKILSSKSKAYTVVGTPCYISPEL  172 (256)
T ss_pred             ceecCCCccccccccCCcccCchh
Confidence            987755443334456777777774

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.54  E-value=3.1e-14  Score=87.85  Aligned_cols=88  Identities=20%  Similarity=0.299  Sum_probs=67.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      +...++||||+.+++|.++++.+           .++.|++.++.++|+++++|+|+++.|+++.   ....+++.|||+
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~  148 (256)
T cd05082          72 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVS---EDNVAKVSDFGL  148 (256)
T ss_pred             CCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEc---CCCcEEecCCcc
Confidence            35689999999999999987542           2678999999999999999999999999995   455689999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ++.......  ....+..|.+||+
T Consensus       149 ~~~~~~~~~--~~~~~~~y~aPE~  170 (256)
T cd05082         149 TKEASSTQD--TGKLPVKWTAPEA  170 (256)
T ss_pred             ceeccccCC--CCccceeecCHHH
Confidence            886543221  1222345666663

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG0597|consensus

Probab=99.54  E-value=8e-15  Score=98.47  Aligned_cols=89  Identities=25%  Similarity=0.416  Sum_probs=75.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc---------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST---------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~---------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...+|+|.||+.| +|+.++..         +.++.+++.++.|||+++|+|+|++|.||+++   .+..+|+.|||+|+
T Consensus        73 ~~~~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~---~~~~~KlcdFg~Ar  148 (808)
T KOG0597|consen   73 SAHLWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLE---KGGTLKLCDFGLAR  148 (808)
T ss_pred             cceEEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeec---CCCceeechhhhhh
Confidence            4679999999998 99999864         33889999999999999999999999999994   77779999999999


Q ss_pred             cCCCCCC-ccceeeccceecccc
Q psy14897         77 NVPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      ....... .++..||.-|.+||+
T Consensus       149 ~m~~~t~vltsikGtPlYmAPEl  171 (808)
T KOG0597|consen  149 AMSTNTSVLTSIKGTPLYMAPEL  171 (808)
T ss_pred             hcccCceeeeeccCcccccCHHH
Confidence            8765432 244578999999985

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.54  E-value=3.1e-14  Score=90.47  Aligned_cols=72  Identities=22%  Similarity=0.252  Sum_probs=61.5

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++|+||+.+|+|.+.+...          .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||+++
T Consensus        81 ~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~---~~~~~kl~DfG~a~  157 (316)
T cd05108          81 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVK---TPQHVKITDFGLAK  157 (316)
T ss_pred             CCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEec---CCCcEEEccccccc
Confidence            4578999999999999988653          2678999999999999999999999999994   44568999999998


Q ss_pred             cCCCC
Q psy14897         77 NVPSS   81 (99)
Q Consensus        77 ~~~~~   81 (99)
                      .+...
T Consensus       158 ~~~~~  162 (316)
T cd05108         158 LLGAD  162 (316)
T ss_pred             cccCC
Confidence            76543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.54  E-value=2.9e-14  Score=88.56  Aligned_cols=70  Identities=10%  Similarity=0.153  Sum_probs=59.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+|+|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        78 ~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~---~~~~~~l~dfg~~  154 (266)
T cd05064          78 GNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVN---SDLVCKISGFRRL  154 (266)
T ss_pred             CCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEc---CCCcEEECCCccc
Confidence            45789999999999999988642          2778999999999999999999999999994   4556899999976


Q ss_pred             ecC
Q psy14897         76 KNV   78 (99)
Q Consensus        76 ~~~   78 (99)
                      ...
T Consensus       155 ~~~  157 (266)
T cd05064         155 QED  157 (266)
T ss_pred             ccc
Confidence            654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.54  E-value=3.5e-14  Score=91.10  Aligned_cols=86  Identities=28%  Similarity=0.378  Sum_probs=69.0

Q ss_pred             CCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ...++++|++ +++|.+.++..        .++.|++.++.|+|+++++|+|+++.|+++.   ....++++|||+++..
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Dfg~~~~~  168 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDCELRILDFGLARQA  168 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEEC---CCCCEEEcCCccceec
Confidence            3578999987 66887776542        2789999999999999999999999999994   4556999999999876


Q ss_pred             CCCCCccceeeccceecccc
Q psy14897         79 PSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ....  ....+|..|.+||+
T Consensus       169 ~~~~--~~~~~t~~y~aPE~  186 (343)
T cd07878         169 DDEM--TGYVATRWYRAPEI  186 (343)
T ss_pred             CCCc--CCccccccccCchH
Confidence            5432  33567888888884

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.54  E-value=3e-14  Score=88.59  Aligned_cols=69  Identities=25%  Similarity=0.407  Sum_probs=58.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      ++..++||||+.+|+|.+++..                         ..++.|++.++.|+|+++++|+|+++.|+++. 
T Consensus        68 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~-  146 (270)
T cd05047          68 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG-  146 (270)
T ss_pred             CCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEc-
Confidence            3568999999999999888753                         22678999999999999999999999999994 


Q ss_pred             CCCCCeEEEeeccceec
Q psy14897         61 GKRGNLVYIIDFGLAKN   77 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~   77 (99)
                        ....+++.|||++..
T Consensus       147 --~~~~~kl~dfgl~~~  161 (270)
T cd05047         147 --ENYVAKIADFGLSRG  161 (270)
T ss_pred             --CCCeEEECCCCCccc
Confidence              556799999998753

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.54  E-value=2.7e-14  Score=100.92  Aligned_cols=90  Identities=26%  Similarity=0.313  Sum_probs=70.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc--------------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST--------------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGN   65 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~--------------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~   65 (99)
                      ++..++||||+++|+|.+.+..                    ..++.|++.++.|+|+++++|+|++|+|++++   ...
T Consensus        74 ~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd---~dg  150 (932)
T PRK13184         74 GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG---LFG  150 (932)
T ss_pred             CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEc---CCC
Confidence            3568999999999999887752                    12568999999999999999999999999994   445


Q ss_pred             eEEEeeccceecCCCCC-------------------Cccceeeccceecccc
Q psy14897         66 LVYIIDFGLAKNVPSSP-------------------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        66 ~~~l~d~g~a~~~~~~~-------------------~~~~~~~t~~~~~~~~   98 (99)
                      .+++.|||++.......                   .....+||..|.+||+
T Consensus       151 ~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~  202 (932)
T PRK13184        151 EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPER  202 (932)
T ss_pred             CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHH
Confidence            68999999998652110                   0112467888888885

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.54  E-value=5e-14  Score=88.10  Aligned_cols=89  Identities=19%  Similarity=0.203  Sum_probs=68.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++++||+.+|+|.+.+...          .++.|++.++.|+|+++++|+|+++.|+++.   ....++++|||.++
T Consensus        81 ~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~---~~~~~kl~Dfg~~~  157 (279)
T cd05111          81 ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLK---SDSIVQIADFGVAD  157 (279)
T ss_pred             CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEEcCCccce
Confidence            4578999999999999988542          2789999999999999999999999999994   45668999999998


Q ss_pred             cCCCCCC---ccceeeccceecccc
Q psy14897         77 NVPSSPS---YERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~---~~~~~~t~~~~~~~~   98 (99)
                      .+.....   .....++..|.+||.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~~pE~  182 (279)
T cd05111         158 LLYPDDKKYFYSEHKTPIKWMALES  182 (279)
T ss_pred             eccCCCcccccCCCCCcccccCHHH
Confidence            7643321   112233445666653

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=4.3e-14  Score=87.27  Aligned_cols=90  Identities=24%  Similarity=0.319  Sum_probs=70.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++|+||+.+++|.+.+...         .++.|++.++.++|+.+++|+|+++.|+++.   ....+++.|||.++
T Consensus        76 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~---~~~~~~l~dfg~~~  152 (263)
T cd06625          76 DETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASK  152 (263)
T ss_pred             CCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccce
Confidence            35789999999999998887532         3789999999999999999999999999995   44569999999987


Q ss_pred             cCCCCCCc----cceeeccceecccc
Q psy14897         77 NVPSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      .+......    ....++..|.+||+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~y~aPE~  178 (263)
T cd06625         153 RLQTICSSGTGMKSVTGTPYWMSPEV  178 (263)
T ss_pred             eccccccccccccCCCcCccccCcce
Confidence            65432211    22345667888874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.53  E-value=3.7e-14  Score=88.92  Aligned_cols=89  Identities=25%  Similarity=0.296  Sum_probs=69.4

Q ss_pred             CCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ...++||||+.+++|.+.+....         ++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||++..
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~  154 (290)
T cd05613          78 TKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKE  154 (290)
T ss_pred             CeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEC---CCCCEEEeeCcccee
Confidence            45789999999999999875432         567999999999999999999999999995   456699999999887


Q ss_pred             CCCCCC--ccceeeccceecccc
Q psy14897         78 VPSSPS--YERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~--~~~~~~t~~~~~~~~   98 (99)
                      +.....  .....++..|.+||.
T Consensus       155 ~~~~~~~~~~~~~~~~~y~aPE~  177 (290)
T cd05613         155 FHEDEVERAYSFCGTIEYMAPDI  177 (290)
T ss_pred             cccccccccccccCCcccCChhh
Confidence            644321  123346667777764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.53  E-value=5.6e-14  Score=87.80  Aligned_cols=72  Identities=26%  Similarity=0.389  Sum_probs=61.5

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++||||+.+|+|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++.
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~---~~~~~~l~dfg~~~  156 (284)
T cd05081          80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVE---SENRVKIGDFGLTK  156 (284)
T ss_pred             CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEEC---CCCeEEECCCcccc
Confidence            4689999999999999988532          2678999999999999999999999999994   45668999999998


Q ss_pred             cCCCC
Q psy14897         77 NVPSS   81 (99)
Q Consensus        77 ~~~~~   81 (99)
                      .+...
T Consensus       157 ~~~~~  161 (284)
T cd05081         157 VLPQD  161 (284)
T ss_pred             cccCC
Confidence            76443

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.53  E-value=2.5e-14  Score=88.77  Aligned_cols=89  Identities=22%  Similarity=0.307  Sum_probs=70.2

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ...++||||+.+|+|.+.+...           .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~---~~~~~~l~Dfg~~  158 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVS  158 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEEC---CCCCEEEccCCCc
Confidence            4578999999999999887642           1678999999999999999999999999995   4456999999998


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ....... ......++..|.+||+
T Consensus       159 ~~~~~~~~~~~~~~g~~~y~aPE~  182 (272)
T cd06637         159 AQLDRTVGRRNTFIGTPYWMAPEV  182 (272)
T ss_pred             eecccccccCCcccccccccCHhH
Confidence            7654321 2233456777888874

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG1095|consensus

Probab=99.53  E-value=8.7e-15  Score=103.50  Aligned_cols=77  Identities=25%  Similarity=0.450  Sum_probs=67.2

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccch----------------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEE
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTGK----------------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVY   68 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~~----------------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~   68 (99)
                      +....++++|||++|||.++|++.+                ++.+|+.|+.||+++.++|||+..+|+++.   ....+|
T Consensus       766 ~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~---~~r~VK  842 (1025)
T KOG1095|consen  766 DSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD---ERRVVK  842 (1025)
T ss_pred             CCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec---ccCcEE
Confidence            4567899999999999999998752                789999999999999999999999999995   447799


Q ss_pred             EeeccceecCCCCCCc
Q psy14897         69 IIDFGLAKNVPSSPSY   84 (99)
Q Consensus        69 l~d~g~a~~~~~~~~~   84 (99)
                      ++|||+|+.+.....|
T Consensus       843 IaDFGlArDiy~~~yy  858 (1025)
T KOG1095|consen  843 IADFGLARDIYDKDYY  858 (1025)
T ss_pred             EcccchhHhhhhchhe
Confidence            9999999977655544

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.53  E-value=4.6e-14  Score=87.35  Aligned_cols=72  Identities=25%  Similarity=0.386  Sum_probs=61.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ....++||||+.+|+|.+++..+          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++
T Consensus        66 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~  142 (257)
T cd05115          66 AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV---NQHYAKISDFGLS  142 (257)
T ss_pred             CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc---CCCcEEeccCCcc
Confidence            34679999999999999988532          2779999999999999999999999999994   4566899999998


Q ss_pred             ecCCC
Q psy14897         76 KNVPS   80 (99)
Q Consensus        76 ~~~~~   80 (99)
                      ..+..
T Consensus       143 ~~~~~  147 (257)
T cd05115         143 KALGA  147 (257)
T ss_pred             ccccC
Confidence            76543

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.53  E-value=4.8e-14  Score=88.16  Aligned_cols=71  Identities=31%  Similarity=0.465  Sum_probs=61.0

Q ss_pred             CCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ...++||||+.+|+|.+++...        .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++.+
T Consensus        81 ~~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~  157 (283)
T cd05080          81 KGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD---NDRLVKIGDFGLAKAV  157 (283)
T ss_pred             ceEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc---CCCcEEEeeccccccc
Confidence            4578999999999999887643        2779999999999999999999999999994   4556899999998876


Q ss_pred             CC
Q psy14897         79 PS   80 (99)
Q Consensus        79 ~~   80 (99)
                      ..
T Consensus       158 ~~  159 (283)
T cd05080         158 PE  159 (283)
T ss_pred             CC
Confidence            44

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.53  E-value=3.1e-14  Score=88.20  Aligned_cols=90  Identities=20%  Similarity=0.309  Sum_probs=70.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+.+...         .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+.
T Consensus        78 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~~l~dfg~~~  154 (267)
T cd06645          78 RDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT---DNGHVKLADFGVSA  154 (267)
T ss_pred             CCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECcceeee
Confidence            45689999999999999887543         2678999999999999999999999999994   45568999999987


Q ss_pred             cCCCCC-Cccceeeccceecccc
Q psy14897         77 NVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      .+.... ......++..|.+||.
T Consensus       155 ~~~~~~~~~~~~~~~~~y~aPE~  177 (267)
T cd06645         155 QITATIAKRKSFIGTPYWMAPEV  177 (267)
T ss_pred             EccCcccccccccCcccccChhh
Confidence            654322 1123356777777774

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.53  E-value=3.5e-14  Score=87.75  Aligned_cols=90  Identities=23%  Similarity=0.345  Sum_probs=71.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +...++||||+.+++|.+++....         ++.|++.++.|+|+++++|+++++.|+++.   ....+++.|||.+.
T Consensus        65 ~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~---~~~~~~l~df~~~~  141 (262)
T cd05572          65 KKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD---SNGYVKLVDFGFAK  141 (262)
T ss_pred             CCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc---CCCCEEEeeCCccc
Confidence            456899999999999999886432         678999999999999999999999999994   45669999999988


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ............++..|.+||.
T Consensus       142 ~~~~~~~~~~~~~~~~~~~PE~  163 (262)
T cd05572         142 KLKSGQKTWTFCGTPEYVAPEI  163 (262)
T ss_pred             ccCcccccccccCCcCccChhH
Confidence            7655432223355666777763

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.53  E-value=6e-14  Score=94.39  Aligned_cols=90  Identities=22%  Similarity=0.337  Sum_probs=68.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------------------------------hHHHHHHHHHHHHhhCCeeecCcC
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------------------------------KEDREWIGRIDYIHSRNFIHRDIK   52 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------------------------------~~~~~i~~~l~~lh~~~i~h~~l~   52 (99)
                      .+..++||||+.+|+|.+.+...                                 .++.|++.++.|+|+.+++|+|++
T Consensus       257 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLK  336 (507)
T PLN03224        257 KGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIK  336 (507)
T ss_pred             CCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCc
Confidence            45689999999999998876421                                 156889999999999999999999


Q ss_pred             CCcEEEeeCCCCCeEEEeeccceecCCCCCCcccee--eccceecccc
Q psy14897         53 PDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV--TTQTTRIGRI   98 (99)
Q Consensus        53 ~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~~~~~~--~t~~~~~~~~   98 (99)
                      +.|+++.   ....+++.|||++.............  .+..|.+||.
T Consensus       337 p~NILl~---~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~  381 (507)
T PLN03224        337 PENLLVT---VDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEE  381 (507)
T ss_pred             hHhEEEC---CCCcEEEEeCcCccccccCCccCccccCCCcceeChhh
Confidence            9999994   44569999999987654332222222  3567777774

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.53  E-value=2.5e-14  Score=101.61  Aligned_cols=92  Identities=22%  Similarity=0.353  Sum_probs=71.7

Q ss_pred             CCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhC-------CeeecCcCCCcEEEeeC-----
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSR-------NFIHRDIKPDNFLMGLG-----   61 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~-------~i~h~~l~~~~~l~~~~-----   61 (99)
                      ..+|+||||+.+|+|.+.+..             ..++.||+.+|.|||..       +|+|+|++|.||++...     
T Consensus        87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg  166 (1021)
T PTZ00266         87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG  166 (1021)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence            458999999999999988753             12779999999999984       49999999999998421     


Q ss_pred             ---------CCCCeEEEeeccceecCCCCCCccceeeccceecccc
Q psy14897         62 ---------KRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        62 ---------~~~~~~~l~d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                               .....+++.|||++..+.........++|..|.+||+
T Consensus       167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEv  212 (1021)
T PTZ00266        167 KITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPEL  212 (1021)
T ss_pred             cccccccccCCCCceEEccCCccccccccccccccCCCccccCHHH
Confidence                     1123489999999987654443345578888999885

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.53  E-value=2.7e-14  Score=90.31  Aligned_cols=69  Identities=25%  Similarity=0.430  Sum_probs=59.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      ++..++||||+.+|+|.+++...                         .++.|++.++.|+|+++++|+|+++.|+++. 
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~-  158 (303)
T cd05088          80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG-  158 (303)
T ss_pred             CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec-
Confidence            45689999999999999887521                         2678999999999999999999999999995 


Q ss_pred             CCCCCeEEEeeccceec
Q psy14897         61 GKRGNLVYIIDFGLAKN   77 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~   77 (99)
                        ....+++.|||++..
T Consensus       159 --~~~~~kl~dfg~~~~  173 (303)
T cd05088         159 --ENYVAKIADFGLSRG  173 (303)
T ss_pred             --CCCcEEeCccccCcc
Confidence              455689999998864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.53  E-value=3.5e-14  Score=89.95  Aligned_cols=89  Identities=26%  Similarity=0.389  Sum_probs=68.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+ ++.+.+...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++
T Consensus        76 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~  151 (309)
T cd07872          76 DKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLIN---ERGELKLADFGLA  151 (309)
T ss_pred             CCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECccccc
Confidence            4578999999986 777665432          2678999999999999999999999999994   4556999999998


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ....... ......++..|.+||+
T Consensus       152 ~~~~~~~~~~~~~~~~~~y~aPE~  175 (309)
T cd07872         152 RAKSVPTKTYSNEVVTLWYRPPDV  175 (309)
T ss_pred             eecCCCccccccccccccccCCHH
Confidence            7653322 2233456778888874

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.53  E-value=6.4e-14  Score=92.07  Aligned_cols=66  Identities=24%  Similarity=0.434  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         30 EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        30 ~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      ++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||+++.+......   ....++..|.+||.
T Consensus       242 ~~~qi~~aL~~LH~~~ivH~dikp~Nill~---~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~  310 (400)
T cd05105         242 FTYQVARGMEFLASKNCVHRDLAARNVLLA---QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPES  310 (400)
T ss_pred             HHHHHHHHHHHHHhCCeeCCCCChHhEEEe---CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhh
Confidence            667899999999999999999999999995   4556899999999876433221   11234455777774

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.53  E-value=3.2e-14  Score=88.16  Aligned_cols=90  Identities=22%  Similarity=0.312  Sum_probs=69.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+.+..+         .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+.
T Consensus        78 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~---~~~~~~l~dfg~~~  154 (267)
T cd06646          78 REKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT---DNGDVKLADFGVAA  154 (267)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCCEEECcCccce
Confidence            35689999999999999887532         2678999999999999999999999999994   44559999999988


Q ss_pred             cCCCCC-Cccceeeccceecccc
Q psy14897         77 NVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      .+.... ......++..|.+||.
T Consensus       155 ~~~~~~~~~~~~~~~~~y~~PE~  177 (267)
T cd06646         155 KITATIAKRKSFIGTPYWMAPEV  177 (267)
T ss_pred             eecccccccCccccCccccCHhH
Confidence            764322 1223355666777763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.53  E-value=5.9e-14  Score=87.70  Aligned_cols=89  Identities=11%  Similarity=0.160  Sum_probs=65.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCC----CCCeEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGK----RGNLVYIID   71 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~----~~~~~~l~d   71 (99)
                      +...++||||+.+|+|..++...          .++.|++.++.|+|+++++|+|+++.|+++....    ....+++.|
T Consensus        88 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d  167 (274)
T cd05076          88 GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSD  167 (274)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecC
Confidence            45689999999999998887542          2789999999999999999999999999985211    122478999


Q ss_pred             ccceecCCCCCCccceeeccceeccc
Q psy14897         72 FGLAKNVPSSPSYERHVTTQTTRIGR   97 (99)
Q Consensus        72 ~g~a~~~~~~~~~~~~~~t~~~~~~~   97 (99)
                      ||.+.......   ...++..|.+||
T Consensus       168 ~g~~~~~~~~~---~~~~~~~~~aPe  190 (274)
T cd05076         168 PGVSFTALSRE---ERVERIPWIAPE  190 (274)
T ss_pred             Ccccccccccc---ccccCCcccCch
Confidence            99876543221   123444556665

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.53  E-value=3.5e-14  Score=89.49  Aligned_cols=90  Identities=20%  Similarity=0.316  Sum_probs=70.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      .+..++||||+.+++|.+++...        .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++..
T Consensus        91 ~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~kL~dfg~~~~  167 (292)
T cd06658          91 GDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT---SDGRIKLSDFGFCAQ  167 (292)
T ss_pred             CCeEEEEEeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEEEccCcchhh
Confidence            45789999999999998877542        2789999999999999999999999999995   445689999999876


Q ss_pred             CCCCCC-ccceeeccceecccc
Q psy14897         78 VPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      +..... .....++..|.+||+
T Consensus       168 ~~~~~~~~~~~~~~~~y~aPE~  189 (292)
T cd06658         168 VSKEVPKRKSLVGTPYWMAPEV  189 (292)
T ss_pred             cccccccCceeecCccccCHHH
Confidence            543322 223456777878774

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.53  E-value=5.7e-14  Score=86.26  Aligned_cols=90  Identities=22%  Similarity=0.302  Sum_probs=71.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeE
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLV   67 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~   67 (99)
                      +...++||||+.+++|.+++...                  .++.|++.++.++|+++++|+|+++.|+++.   ....+
T Consensus        68 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~---~~~~~  144 (262)
T cd00192          68 EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG---EDLVV  144 (262)
T ss_pred             CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC---CCCcE
Confidence            46789999999999999988753                  2789999999999999999999999999995   44669


Q ss_pred             EEeeccceecCCCCC---Cccceeeccceecccc
Q psy14897         68 YIIDFGLAKNVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        68 ~l~d~g~a~~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                      ++.|||.+.......   ......++..|.+||.
T Consensus       145 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  178 (262)
T cd00192         145 KISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPES  178 (262)
T ss_pred             EEcccccccccccccccccccCCCcCccccCHHH
Confidence            999999998765432   1122344556777763

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.52  E-value=3e-14  Score=88.92  Aligned_cols=90  Identities=23%  Similarity=0.323  Sum_probs=69.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch-----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK-----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~-----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.+++|.+.+....           ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.
T Consensus        65 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~---~~~~~~l~dfg~  141 (277)
T cd05577          65 KDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLD---DHGNVRISDLGL  141 (277)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEccCcc
Confidence            356899999999999988775321           678999999999999999999999999994   455689999998


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.............++..|.+||.
T Consensus       142 ~~~~~~~~~~~~~~~~~~y~~PE~  165 (277)
T cd05577         142 AVELKGGKKIKGRAGTPGYMAPEV  165 (277)
T ss_pred             hhhhccCCccccccCCCCcCCHHH
Confidence            876543322233344556666663

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.52  E-value=6.9e-14  Score=86.39  Aligned_cols=73  Identities=22%  Similarity=0.314  Sum_probs=61.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ....++||||+.+|+|.+++...         .++.|++.++.++|+++++|+|++|.|+++.   ....+++.|||.++
T Consensus        67 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~---~~~~~kl~Dfg~~~  143 (257)
T cd05116          67 AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV---TQHYAKISDFGLSK  143 (257)
T ss_pred             CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc---CCCeEEECCCcccc
Confidence            34678999999999999888542         2779999999999999999999999999994   45668999999988


Q ss_pred             cCCCC
Q psy14897         77 NVPSS   81 (99)
Q Consensus        77 ~~~~~   81 (99)
                      .+...
T Consensus       144 ~~~~~  148 (257)
T cd05116         144 ALGAD  148 (257)
T ss_pred             ccCCC
Confidence            76443

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG0584|consensus

Probab=99.52  E-value=1.9e-14  Score=96.81  Aligned_cols=89  Identities=22%  Similarity=0.221  Sum_probs=76.2

Q ss_pred             CCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhC--CeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSR--NFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~--~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ..+.+|+|.+..|.|..++++.+         |++||+.||.|||++  .|+|||++-.||++.  .+.+.+|+.|+|+|
T Consensus       116 ~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLA  193 (632)
T KOG0584|consen  116 KTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLA  193 (632)
T ss_pred             ceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHH
Confidence            56889999999999999987643         999999999999987  599999999999985  56678999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ........ ...+||..+.+||+
T Consensus       194 tl~r~s~a-ksvIGTPEFMAPEm  215 (632)
T KOG0584|consen  194 TLLRKSHA-KSVIGTPEFMAPEM  215 (632)
T ss_pred             HHhhcccc-ceeccCccccChHH
Confidence            87654433 44789999999985

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.52  E-value=4.9e-14  Score=87.04  Aligned_cols=86  Identities=29%  Similarity=0.401  Sum_probs=67.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+++|.+.++..         .++.|++.++.|+|+.+++|+++++.|+++.   ....+++.|||+++
T Consensus        69 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~  145 (260)
T cd05611          69 KDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID---QTGHLKLTDFGLSR  145 (260)
T ss_pred             CCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCcEEEeecccce
Confidence            45689999999999999888542         2779999999999999999999999999994   45568999999887


Q ss_pred             cCCCCCCccceeeccceeccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGR   97 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~   97 (99)
                      ......   ...++..|.+||
T Consensus       146 ~~~~~~---~~~~~~~y~~pe  163 (260)
T cd05611         146 NGLENK---KFVGTPDYLAPE  163 (260)
T ss_pred             eccccc---cCCCCcCccChh
Confidence            654321   223455566665

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.52  E-value=5.6e-14  Score=88.56  Aligned_cols=69  Identities=22%  Similarity=0.344  Sum_probs=58.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      .+..++||||+.+|+|.+++..                         ..++.|++.++.|+|+++++|+|+++.|+++. 
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~-  153 (297)
T cd05089          75 RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG-  153 (297)
T ss_pred             CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC-
Confidence            3468999999999999988753                         12678999999999999999999999999995 


Q ss_pred             CCCCCeEEEeeccceec
Q psy14897         61 GKRGNLVYIIDFGLAKN   77 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~   77 (99)
                        ....+++.|||++..
T Consensus       154 --~~~~~kl~dfg~~~~  168 (297)
T cd05089         154 --ENLASKIADFGLSRG  168 (297)
T ss_pred             --CCCeEEECCcCCCcc
Confidence              455689999998864

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.52  E-value=6.7e-14  Score=86.15  Aligned_cols=89  Identities=17%  Similarity=0.278  Sum_probs=70.2

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ..+++||||+.+++|.+++...           .++.|++.++.++|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        73 ~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~---~~~~~~l~df~~~  149 (257)
T cd08223          73 GLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT---RTNIIKVGDLGIA  149 (257)
T ss_pred             CEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe---cCCcEEEecccce
Confidence            3578999999999998887541           3778999999999999999999999999995   4566999999998


Q ss_pred             ecCCCCCC-ccceeeccceecccc
Q psy14897         76 KNVPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      ..+..... .....++..|.+||+
T Consensus       150 ~~~~~~~~~~~~~~~~~~y~aPE~  173 (257)
T cd08223         150 RVLENQCDMASTLIGTPYYMSPEL  173 (257)
T ss_pred             EEecccCCccccccCCcCccChhH
Confidence            86643321 123356777888874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.52  E-value=6.1e-14  Score=87.65  Aligned_cols=89  Identities=22%  Similarity=0.281  Sum_probs=69.0

Q ss_pred             CCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      ...++||||+.+++|.+.+..             ..++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||
T Consensus        93 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~kl~dfg  169 (286)
T cd06638          93 DQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT---TEGGVKLVDFG  169 (286)
T ss_pred             CeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC---CCCCEEEccCC
Confidence            468999999999999887542             11678999999999999999999999999995   34458999999


Q ss_pred             ceecCCCCC-Cccceeeccceecccc
Q psy14897         74 LAKNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ++..+.... ......++..|.+||+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~y~aPE~  195 (286)
T cd06638         170 VSAQLTSTRLRRNTSVGTPFWMAPEV  195 (286)
T ss_pred             ceeecccCCCccccccCCCcccChhh
Confidence            988764322 1223356777888874

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.52  E-value=6.4e-14  Score=86.12  Aligned_cols=90  Identities=20%  Similarity=0.241  Sum_probs=71.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++||||+.+++|.+++...           .++.|++.++.|+|+.+++|+++++.|+++.   ....+++.|||.
T Consensus        71 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~---~~~~~~l~df~~  147 (256)
T cd08529          71 KGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD---AYDNVKIGDLGV  147 (256)
T ss_pred             CCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe---CCCCEEEccccc
Confidence            35689999999999999988653           2678999999999999999999999999995   445689999999


Q ss_pred             eecCCCCCCc-cceeeccceecccc
Q psy14897         75 AKNVPSSPSY-ERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~-~~~~~t~~~~~~~~   98 (99)
                      +..+...... ....++..|.+||+
T Consensus       148 ~~~~~~~~~~~~~~~~~~~y~aPE~  172 (256)
T cd08529         148 AKLLSDNTNFANTIVGTPYYLSPEL  172 (256)
T ss_pred             ceeccCccchhhccccCccccCHHH
Confidence            8876544322 22356677777774

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.52  E-value=7.8e-14  Score=88.10  Aligned_cols=89  Identities=21%  Similarity=0.304  Sum_probs=67.9

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG   61 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~   61 (99)
                      ...++||||+.+|+|.+++...                         .++.|++.++.|+|+++++|+|+++.|+++.  
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~--  171 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT--  171 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEc--
Confidence            4678999999999999987542                         1568999999999999999999999999994  


Q ss_pred             CCCCeEEEeeccceecCCCCCCcc---ceeeccceecccc
Q psy14897         62 KRGNLVYIIDFGLAKNVPSSPSYE---RHVTTQTTRIGRI   98 (99)
Q Consensus        62 ~~~~~~~l~d~g~a~~~~~~~~~~---~~~~t~~~~~~~~   98 (99)
                       ....+++.|||.++.+.......   ...++..|.+||.
T Consensus       172 -~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~  210 (304)
T cd05101         172 -ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEA  210 (304)
T ss_pred             -CCCcEEECCCccceecccccccccccCCCCCceeeCchh
Confidence             44568999999998764432211   1122345777763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.52  E-value=5e-14  Score=89.29  Aligned_cols=89  Identities=18%  Similarity=0.291  Sum_probs=70.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+++|.+++...         .++.|++.++.|+|+ .+++|+|+++.|+++.   ....+++.|||.+
T Consensus        71 ~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~  147 (308)
T cd06615          71 DGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVS  147 (308)
T ss_pred             CCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe---cCCcEEEccCCCc
Confidence            46789999999999999988542         378999999999997 6899999999999995   4456899999998


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ..+.... .....++..|.+||.
T Consensus       148 ~~~~~~~-~~~~~~~~~~~aPE~  169 (308)
T cd06615         148 GQLIDSM-ANSFVGTRSYMSPER  169 (308)
T ss_pred             ccccccc-cccCCCCcCccChhH
Confidence            7654332 133456667777764

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.52  E-value=4.7e-14  Score=87.94  Aligned_cols=90  Identities=14%  Similarity=0.248  Sum_probs=67.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCe
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNL   66 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~   66 (99)
                      ++..++||||+.+|+|.+++...                   .++.|++.++.|+|+.+++|+|+++.|+++.   ....
T Consensus        81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~---~~~~  157 (277)
T cd05062          81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFT  157 (277)
T ss_pred             CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc---CCCC
Confidence            45789999999999999887531                   1567899999999999999999999999995   4556


Q ss_pred             EEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         67 VYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        67 ~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      +++.|||+++.+......   ....++..|.+||+
T Consensus       158 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  192 (277)
T cd05062         158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES  192 (277)
T ss_pred             EEECCCCCccccCCcceeecCCCCccCHhhcChhH
Confidence            899999998765432211   11223445666664

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.52  E-value=7.2e-14  Score=87.20  Aligned_cols=71  Identities=23%  Similarity=0.232  Sum_probs=60.7

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...+++|||+.+|+|.+.+..+          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++
T Consensus        81 ~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~---~~~~~kL~dfG~~~  157 (279)
T cd05109          81 STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK---SPNHVKITDFGLAR  157 (279)
T ss_pred             CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc---CCCcEEECCCCcee
Confidence            3567999999999999988642          1689999999999999999999999999994   44568999999998


Q ss_pred             cCCC
Q psy14897         77 NVPS   80 (99)
Q Consensus        77 ~~~~   80 (99)
                      .+..
T Consensus       158 ~~~~  161 (279)
T cd05109         158 LLDI  161 (279)
T ss_pred             eccc
Confidence            7653

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0579|consensus

Probab=99.52  E-value=2.2e-14  Score=97.86  Aligned_cols=92  Identities=16%  Similarity=0.295  Sum_probs=74.8

Q ss_pred             CCCCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          4 FRSTQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         4 ~~~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      |-++++||+.||+.||.++..+-.          +-++.|++.++.|||+++|||||++..|+++.   -.+.++++|||
T Consensus        99 y~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~T---ldGdirLADFG  175 (1187)
T KOG0579|consen   99 YFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLT---LDGDIRLADFG  175 (1187)
T ss_pred             hccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEE---ecCcEeeeccc
Confidence            345789999999999998887643          22789999999999999999999999999985   45669999999


Q ss_pred             ceecCC-CCCCccceeeccceecccc
Q psy14897         74 LAKNVP-SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~-~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+.... .......+.||..+.+||.
T Consensus       176 VSAKn~~t~qkRDsFIGTPYWMAPEV  201 (1187)
T KOG0579|consen  176 VSAKNKSTRQKRDSFIGTPYWMAPEV  201 (1187)
T ss_pred             ccccchhHHhhhccccCCcccccchh
Confidence            876643 2334466789988888874

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.51  E-value=7.1e-14  Score=87.69  Aligned_cols=72  Identities=21%  Similarity=0.375  Sum_probs=61.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      ++.+++||||+.+|+|.+++..+                         .++.|++.++.|+|+.+++|+|+++.|+++. 
T Consensus        88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~-  166 (293)
T cd05053          88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT-  166 (293)
T ss_pred             CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc-
Confidence            45689999999999999888532                         2788999999999999999999999999994 


Q ss_pred             CCCCCeEEEeeccceecCCC
Q psy14897         61 GKRGNLVYIIDFGLAKNVPS   80 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~~~~   80 (99)
                        ....+++.|||.++.+..
T Consensus       167 --~~~~~kL~Dfg~~~~~~~  184 (293)
T cd05053         167 --EDHVMKIADFGLARDIHH  184 (293)
T ss_pred             --CCCeEEeCcccccccccc
Confidence              456789999999886644

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.51  E-value=7.4e-14  Score=87.62  Aligned_cols=90  Identities=23%  Similarity=0.340  Sum_probs=68.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKR   63 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~   63 (99)
                      .+..++||||+.+++|.+++...                      .++.|++.++.|+|+++++|+|++|.|+++.   .
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~---~  155 (288)
T cd05093          79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG---E  155 (288)
T ss_pred             CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc---c
Confidence            45789999999999998887521                      2678999999999999999999999999994   4


Q ss_pred             CCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         64 GNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        64 ~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      ...+++.|||.++.+......   ....++..|.+||.
T Consensus       156 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  193 (288)
T cd05093         156 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPES  193 (288)
T ss_pred             CCcEEeccCCccccccCCceeecCCCCCccccccCHHH
Confidence            556899999998865433211   11122445667763

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.51  E-value=9.6e-14  Score=87.93  Aligned_cols=92  Identities=25%  Similarity=0.281  Sum_probs=68.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc------------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC-CCCCe
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST------------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG-KRGNL   66 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~------------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~-~~~~~   66 (99)
                      +...++||||+.+ ++.+.+..                  ..++.|++.++.|+|+.+++|+|++++|+++..+ .....
T Consensus        72 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~  150 (317)
T cd07867          72 DRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR  150 (317)
T ss_pred             CCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCc
Confidence            4568999999876 66555421                  1367899999999999999999999999998321 23456


Q ss_pred             EEEeeccceecCCCCCC----ccceeeccceecccc
Q psy14897         67 VYIIDFGLAKNVPSSPS----YERHVTTQTTRIGRI   98 (99)
Q Consensus        67 ~~l~d~g~a~~~~~~~~----~~~~~~t~~~~~~~~   98 (99)
                      +++.|||+++.+.....    .....+|..|.+||+
T Consensus       151 ~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~  186 (317)
T cd07867         151 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPEL  186 (317)
T ss_pred             EEEeeccceeccCCCcccccccCcceecccccCcHH
Confidence            89999999987643321    233467888888884

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.51  E-value=7.4e-14  Score=86.72  Aligned_cols=90  Identities=13%  Similarity=0.176  Sum_probs=67.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCC----CCeEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKR----GNLVYIID   71 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~----~~~~~l~d   71 (99)
                      +...++||||+.+|+|..++..+          .++.|++.++.|+|+++++|+|++|.|+++.....    ...+++.|
T Consensus        76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d  155 (262)
T cd05077          76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSD  155 (262)
T ss_pred             CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence            45679999999999988877532          27899999999999999999999999999952211    11378999


Q ss_pred             ccceecCCCCCCccceeeccceecccc
Q psy14897         72 FGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        72 ~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ||.+.......   ...++..|.+||.
T Consensus       156 ~g~~~~~~~~~---~~~~~~~y~aPE~  179 (262)
T cd05077         156 PGIPITVLSRQ---ECVERIPWIAPEC  179 (262)
T ss_pred             CCCCccccCcc---cccccccccChhh
Confidence            99887653322   2345556677764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.51  E-value=5.5e-14  Score=87.78  Aligned_cols=90  Identities=21%  Similarity=0.303  Sum_probs=69.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ....+++|||+.+|+|.+.++..           .++.|++.++.|+|+.+++|+++++.|+++.   ....+++.|||.
T Consensus        91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~---~~~~~~l~dfg~  167 (282)
T cd06636          91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLT---ENAEVKLVDFGV  167 (282)
T ss_pred             CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCcc
Confidence            35679999999999998887542           1568999999999999999999999999995   445589999999


Q ss_pred             eecCCCC-CCccceeeccceecccc
Q psy14897         75 AKNVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      +...... .......++..|.+||.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~y~aPE~  192 (282)
T cd06636         168 SAQLDRTVGRRNTFIGTPYWMAPEV  192 (282)
T ss_pred             hhhhhccccCCCcccccccccCHhh
Confidence            8765322 12233456677777763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.51  E-value=1.1e-13  Score=86.62  Aligned_cols=72  Identities=26%  Similarity=0.408  Sum_probs=61.2

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++||||+.+++|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.++
T Consensus        81 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~---~~~~~~l~dfg~~~  157 (284)
T cd05079          81 NGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLTK  157 (284)
T ss_pred             CceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc---CCCCEEECCCcccc
Confidence            4688999999999999987532          2678999999999999999999999999994   45568999999988


Q ss_pred             cCCCC
Q psy14897         77 NVPSS   81 (99)
Q Consensus        77 ~~~~~   81 (99)
                      .+...
T Consensus       158 ~~~~~  162 (284)
T cd05079         158 AIETD  162 (284)
T ss_pred             ccccC
Confidence            76543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0668|consensus

Probab=99.51  E-value=1.5e-14  Score=88.41  Aligned_cols=96  Identities=27%  Similarity=0.388  Sum_probs=76.7

Q ss_pred             CCCCCCCCeEEEEEeeCCCCchhhhcc------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          1 VKPFRSTQSCLVFPYSYGTKSGEQIST------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         1 ~~~~~~~~~~~v~e~~~~g~l~~~l~~------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      |++-.+...-+||||+++.|+...-..      +.++.+++.++.|||++||.|||++|.|+.++  .....+++.|+|+
T Consensus       102 V~Dp~SktpaLiFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId--h~~rkLrlIDWGL  179 (338)
T KOG0668|consen  102 VKDPESKTPSLIFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID--HELRKLRLIDWGL  179 (338)
T ss_pred             hcCccccCchhHhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec--hhhceeeeeecch
Confidence            344556678899999999877654332      34789999999999999999999999999996  4556689999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |...-++..+..++.+.-+.=||+
T Consensus       180 AEFYHp~~eYnVRVASRyfKGPEL  203 (338)
T KOG0668|consen  180 AEFYHPGKEYNVRVASRYFKGPEL  203 (338)
T ss_pred             HhhcCCCceeeeeeehhhcCCchh
Confidence            999877777777777776666654

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.51  E-value=9.1e-14  Score=87.33  Aligned_cols=90  Identities=23%  Similarity=0.319  Sum_probs=68.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      .+..++||||+.+++|.+++..                         ..++.|++.++.|+|+++++|+|+++.|+++. 
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~-  157 (291)
T cd05094          79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG-  157 (291)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc-
Confidence            3568999999999999988743                         12678999999999999999999999999995 


Q ss_pred             CCCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         61 GKRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                        ....+++.|||.+.........   ....++..|.+||.
T Consensus       158 --~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~  196 (291)
T cd05094         158 --ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPES  196 (291)
T ss_pred             --cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHH
Confidence              4567999999998765432211   11233455677763

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.51  E-value=3.7e-14  Score=89.43  Aligned_cols=90  Identities=27%  Similarity=0.423  Sum_probs=70.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ....++||||+.+++|.+++...        .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+..
T Consensus        89 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~---~~~~~kl~dfg~~~~  165 (296)
T cd06654          89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQ  165 (296)
T ss_pred             CCEEEEeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc---CCCCEEECccccchh
Confidence            35689999999999999887543        2678999999999999999999999999995   445689999998876


Q ss_pred             CCCCCC-ccceeeccceecccc
Q psy14897         78 VPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      ...... .....++..|.+||.
T Consensus       166 ~~~~~~~~~~~~~~~~y~aPE~  187 (296)
T cd06654         166 ITPEQSKRSTMVGTPYWMAPEV  187 (296)
T ss_pred             ccccccccCcccCCccccCHHH
Confidence            543321 123356667777774

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.51  E-value=9.7e-14  Score=85.97  Aligned_cols=72  Identities=22%  Similarity=0.406  Sum_probs=61.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++||||+.+++|.+.+...           .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.
T Consensus        74 ~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~df~~  150 (263)
T cd05052          74 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGL  150 (263)
T ss_pred             CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCcEEeCCCcc
Confidence            45689999999999999887532           2678999999999999999999999999994   456699999999


Q ss_pred             eecCCC
Q psy14897         75 AKNVPS   80 (99)
Q Consensus        75 a~~~~~   80 (99)
                      +.....
T Consensus       151 ~~~~~~  156 (263)
T cd05052         151 SRLMTG  156 (263)
T ss_pred             cccccc
Confidence            887654

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.51  E-value=7.6e-14  Score=85.94  Aligned_cols=90  Identities=23%  Similarity=0.297  Sum_probs=71.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+.++++|||+.+|+|.+.+...           .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.
T Consensus        71 ~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~---~~~~~kl~d~~~  147 (256)
T cd08221          71 DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT---KAGLIKLGDFGI  147 (256)
T ss_pred             CCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe---CCCCEEECcCcc
Confidence            45689999999999999988653           2678999999999999999999999999995   445689999999


Q ss_pred             eecCCCCC-Cccceeeccceecccc
Q psy14897         75 AKNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +....... ......++..|.+||.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~y~ape~  172 (256)
T cd08221         148 SKILGSEYSMAETVVGTPYYMSPEL  172 (256)
T ss_pred             eEEcccccccccccCCCccccCHhh
Confidence            88764433 1223356677777764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.51  E-value=6.5e-14  Score=86.78  Aligned_cols=89  Identities=22%  Similarity=0.260  Sum_probs=69.2

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ..+++||||+.+++|.+++...         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+..
T Consensus        79 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~Dfg~~~~  155 (265)
T cd06652          79 RTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD---SVGNVKLGDFGASKR  155 (265)
T ss_pred             ceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec---CCCCEEECcCccccc
Confidence            4578999999999999887542         2789999999999999999999999999984   455689999999876


Q ss_pred             CCCCC----Cccceeeccceecccc
Q psy14897         78 VPSSP----SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~----~~~~~~~t~~~~~~~~   98 (99)
                      +....    ......++..|.+||.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~  180 (265)
T cd06652         156 LQTICLSGTGMKSVTGTPYWMSPEV  180 (265)
T ss_pred             cccccccccccccCCCCccccChhh
Confidence            53211    1122346667777774

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.51  E-value=7.7e-14  Score=87.55  Aligned_cols=71  Identities=18%  Similarity=0.343  Sum_probs=60.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCe
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNL   66 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~   66 (99)
                      .+..++||||+.+|+|.++++..                   .++.|++.++.|+|+++++|+|+++.|+++.   ....
T Consensus        81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~---~~~~  157 (288)
T cd05061          81 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFT  157 (288)
T ss_pred             CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc---CCCc
Confidence            35689999999999999998531                   2678999999999999999999999999995   4456


Q ss_pred             EEEeeccceecCC
Q psy14897         67 VYIIDFGLAKNVP   79 (99)
Q Consensus        67 ~~l~d~g~a~~~~   79 (99)
                      +++.|||+++.+.
T Consensus       158 ~~L~Dfg~~~~~~  170 (288)
T cd05061         158 VKIGDFGMTRDIY  170 (288)
T ss_pred             EEECcCCcccccc
Confidence            8999999987653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.51  E-value=8.5e-14  Score=85.75  Aligned_cols=90  Identities=24%  Similarity=0.276  Sum_probs=69.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++.+++||||+.+|++.+.+...           .++.|++.++.++|+++++|+|+++.|+++.   ....+++.|||.
T Consensus        70 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~---~~~~~~l~dfg~  146 (255)
T cd08219          70 DGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLT---QNGKVKLGDFGS  146 (255)
T ss_pred             CCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEC---CCCcEEEcccCc
Confidence            35689999999999998876431           2689999999999999999999999999994   455689999999


Q ss_pred             eecCCCCCCc-cceeeccceecccc
Q psy14897         75 AKNVPSSPSY-ERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~-~~~~~t~~~~~~~~   98 (99)
                      +......... ....++..|.+||.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~aPE~  171 (255)
T cd08219         147 ARLLTSPGAYACTYVGTPYYVPPEI  171 (255)
T ss_pred             ceeecccccccccccCCccccCHHH
Confidence            8876443221 22345666667763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.51  E-value=9.4e-14  Score=88.19  Aligned_cols=72  Identities=26%  Similarity=0.416  Sum_probs=60.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      ++..++||||+.+|+|.+++...                         .++.|++.++.|+|+++++|+|+++.|+++. 
T Consensus        90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~-  168 (314)
T cd05099          90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVT-  168 (314)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEc-
Confidence            35689999999999999887532                         1578999999999999999999999999995 


Q ss_pred             CCCCCeEEEeeccceecCCC
Q psy14897         61 GKRGNLVYIIDFGLAKNVPS   80 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~~~~   80 (99)
                        ....+++.|||.++....
T Consensus       169 --~~~~~kL~Dfg~~~~~~~  186 (314)
T cd05099         169 --EDNVMKIADFGLARGVHD  186 (314)
T ss_pred             --CCCcEEEccccccccccc
Confidence              445689999999986643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.51  E-value=8.3e-14  Score=86.20  Aligned_cols=91  Identities=21%  Similarity=0.335  Sum_probs=70.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+.++..         .++.|++.++.++|+++++|+++++.|+++.  ..+..+++.|||.+.
T Consensus        75 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~--~~~~~~~l~dfg~~~  152 (268)
T cd06630          75 DSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLID--STGQRLRIADFGAAA  152 (268)
T ss_pred             CCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEccccccc
Confidence            35689999999999999888542         2679999999999999999999999999984  334568999999987


Q ss_pred             cCCCCCCc-----cceeeccceecccc
Q psy14897         77 NVPSSPSY-----ERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~-----~~~~~t~~~~~~~~   98 (99)
                      .+......     ....++..|.+||+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~PE~  179 (268)
T cd06630         153 RLAAKGTGAGEFQGQLLGTIAFMAPEV  179 (268)
T ss_pred             ccccccccCCccccccccccceeCHhH
Confidence            76433111     12345667777764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG1094|consensus

Probab=99.51  E-value=1.1e-14  Score=98.08  Aligned_cols=77  Identities=25%  Similarity=0.433  Sum_probs=69.0

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccch-----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTGK-----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~~-----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      .++.++||+|||++|+|.+++.++.           ++.||+.|+.||.+.+++|+|+.+.|++++   ....+|++|||
T Consensus       606 ~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~---~e~~iKiadfg  682 (807)
T KOG1094|consen  606 QDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVD---GEFTIKIADFG  682 (807)
T ss_pred             cCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeec---CcccEEecCcc
Confidence            4678899999999999999997652           889999999999999999999999999995   66779999999


Q ss_pred             ceecCCCCCCc
Q psy14897         74 LAKNVPSSPSY   84 (99)
Q Consensus        74 ~a~~~~~~~~~   84 (99)
                      .++.+..++.+
T Consensus       683 msR~lysg~yy  693 (807)
T KOG1094|consen  683 MSRNLYSGDYY  693 (807)
T ss_pred             cccccccCCce
Confidence            99988777765

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.50  E-value=1e-13  Score=86.67  Aligned_cols=90  Identities=21%  Similarity=0.334  Sum_probs=67.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc--------------------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEe
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST--------------------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMG   59 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~--------------------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~   59 (99)
                      .+..++||||+.+++|.+++..                          ..++.|++.++.|+|+++++|+|++|.|+++.
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~  158 (283)
T cd05090          79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG  158 (283)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc
Confidence            4568999999999999888731                          12678999999999999999999999999995


Q ss_pred             eCCCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         60 LGKRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        60 ~~~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                         ....+++.|||++..+......   ....++..|.+||.
T Consensus       159 ---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  197 (283)
T cd05090         159 ---EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEA  197 (283)
T ss_pred             ---CCCcEEeccccccccccCCcceecccCCCccceecChHH
Confidence               4456899999999876433211   11223345666663

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.50  E-value=7.8e-14  Score=90.50  Aligned_cols=87  Identities=28%  Similarity=0.363  Sum_probs=67.1

Q ss_pred             CeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ..++||||+.+ +|.+.+...         .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||+++..
T Consensus        78 ~~~lv~e~~~~-~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~a~~~  153 (372)
T cd07853          78 EIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN---SNCVLKICDFGLARVE  153 (372)
T ss_pred             eEEEEeecccc-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEEC---CCCCEEeccccceeec
Confidence            68999999974 777666432         2679999999999999999999999999994   5567999999999865


Q ss_pred             CCCC--Cccceeeccceecccc
Q psy14897         79 PSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      ....  ......++..|.+||+
T Consensus       154 ~~~~~~~~~~~~~~~~y~aPE~  175 (372)
T cd07853         154 EPDESKHMTQEVVTQYYRAPEI  175 (372)
T ss_pred             ccCccccCCCCCcCCCcCCHHH
Confidence            4322  1223356777888874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.50  E-value=4.8e-14  Score=92.18  Aligned_cols=88  Identities=23%  Similarity=0.387  Sum_probs=69.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ...++|||++. ++|.+++...         .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++..
T Consensus       159 ~~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~---~~~~~~l~DfG~a~~  234 (392)
T PHA03207        159 STVCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLD---EPENAVLGDFGAACK  234 (392)
T ss_pred             CEEEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCCCEEEccCccccc
Confidence            46899999986 5777777432         2789999999999999999999999999994   556699999999877


Q ss_pred             CCCCCC---ccceeeccceecccc
Q psy14897         78 VPSSPS---YERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~---~~~~~~t~~~~~~~~   98 (99)
                      +.....   .....+|..|.+||+
T Consensus       235 ~~~~~~~~~~~~~~gt~~y~aPE~  258 (392)
T PHA03207        235 LDAHPDTPQCYGWSGTLETNSPEL  258 (392)
T ss_pred             cCcccccccccccccccCccCHhH
Confidence            654322   123467888888875

>PTZ00284 protein kinase; Provisional

Probab=99.50  E-value=7.5e-14  Score=93.09  Aligned_cols=89  Identities=26%  Similarity=0.306  Sum_probs=66.9

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCC-------------
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKR-------------   63 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~-------------   63 (99)
                      ...++|||++ +++|.+++..+         .++.|++.++.|||+ .+++|+|++++|+++.....             
T Consensus       205 ~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~  283 (467)
T PTZ00284        205 GHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPD  283 (467)
T ss_pred             ceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCC
Confidence            4578999987 56777766542         378999999999998 59999999999999952211             


Q ss_pred             CCeEEEeeccceecCCCCCCccceeeccceecccc
Q psy14897         64 GNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        64 ~~~~~l~d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...+++.|||.+.....  .....++|..|.+||+
T Consensus       284 ~~~vkl~DfG~~~~~~~--~~~~~~gt~~Y~APE~  316 (467)
T PTZ00284        284 PCRVRICDLGGCCDERH--SRTAIVSTRHYRSPEV  316 (467)
T ss_pred             CceEEECCCCccccCcc--ccccccCCccccCcHH
Confidence            12489999998764322  2245678999999985

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.50  E-value=1.3e-13  Score=84.79  Aligned_cols=71  Identities=23%  Similarity=0.361  Sum_probs=60.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+++|.+++...          .+..|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        65 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~  141 (252)
T cd05084          65 KQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT---EKNVLKISDFGMS  141 (252)
T ss_pred             CCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc---CCCcEEECccccC
Confidence            45689999999999999988532          1679999999999999999999999999994   4556899999998


Q ss_pred             ecCC
Q psy14897         76 KNVP   79 (99)
Q Consensus        76 ~~~~   79 (99)
                      ....
T Consensus       142 ~~~~  145 (252)
T cd05084         142 REEE  145 (252)
T ss_pred             cccc
Confidence            7654

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.50  E-value=1e-13  Score=86.48  Aligned_cols=74  Identities=23%  Similarity=0.375  Sum_probs=61.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEE
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYI   69 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l   69 (99)
                      .+..++||||+.+++|.+++...                .++.|++.++.|+|+++++|+|++++|+++..+.....+++
T Consensus        81 ~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl  160 (277)
T cd05036          81 RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKI  160 (277)
T ss_pred             CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEe
Confidence            45679999999999999987532                26789999999999999999999999999963333456899


Q ss_pred             eeccceecCC
Q psy14897         70 IDFGLAKNVP   79 (99)
Q Consensus        70 ~d~g~a~~~~   79 (99)
                      .|||.++.+.
T Consensus       161 ~dfg~~~~~~  170 (277)
T cd05036         161 ADFGMARDIY  170 (277)
T ss_pred             ccCccccccC
Confidence            9999988763

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.50  E-value=1.5e-13  Score=85.94  Aligned_cols=90  Identities=16%  Similarity=0.287  Sum_probs=68.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.++++...+..          ..++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||++
T Consensus        74 ~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~---~~~~~kl~dfg~~  150 (282)
T cd06643          74 ENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT---LDGDIKLADFGVS  150 (282)
T ss_pred             CCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---cCCCEEEcccccc
Confidence            4568999999999999887642          12778999999999999999999999999994   4456999999998


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ....... ......++..|.+||+
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~aPE~  174 (282)
T cd06643         151 AKNTRTIQRRDSFIGTPYWMAPEV  174 (282)
T ss_pred             ccccccccccccccccccccCHhh
Confidence            7653322 1122345666777764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG0603|consensus

Probab=99.50  E-value=5.6e-14  Score=94.62  Aligned_cols=90  Identities=21%  Similarity=0.347  Sum_probs=71.9

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...+.|+|||++.++.+.+.+...        .|+.+++.++.|||+++++|||++|.||++.  .....+++.+||.++
T Consensus       387 ~~~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~  464 (612)
T KOG0603|consen  387 DGKEIYLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWS  464 (612)
T ss_pred             CCceeeeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhh
Confidence            346789999999999887766432        3889999999999999999999999999994  245669999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...+.  +..-+-|..|.+||.
T Consensus       465 ~~~~~--~~tp~~t~~y~APEv  484 (612)
T KOG0603|consen  465 ELERS--CDTPALTLQYVAPEV  484 (612)
T ss_pred             hCchh--hcccchhhcccChhh
Confidence            87655  333455666777764

>KOG0201|consensus

Probab=99.50  E-value=6.7e-15  Score=95.72  Aligned_cols=91  Identities=27%  Similarity=0.414  Sum_probs=76.9

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..+|++|||+.||++.+.++...         +.++++.|+.|+|.++.+|+|+++.|+++.   ....+++.|||.+
T Consensus        82 ~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s---~~g~vkl~DfgVa  158 (467)
T KOG0201|consen   82 KGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS---ESGDVKLADFGVA  158 (467)
T ss_pred             ecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEe---ccCcEEEEeccee
Confidence            4567899999999999999887654         568999999999999999999999999994   4467999999998


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ..+.... ....++||.-+.+||+
T Consensus       159 ~ql~~~~~rr~tfvGTPfwMAPEV  182 (467)
T KOG0201|consen  159 GQLTNTVKRRKTFVGTPFWMAPEV  182 (467)
T ss_pred             eeeechhhccccccccccccchhh
Confidence            8775543 3367899999999985

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.50  E-value=1.1e-13  Score=86.82  Aligned_cols=89  Identities=22%  Similarity=0.262  Sum_probs=68.5

Q ss_pred             CCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      +..++||||+.+|+|.+.++.             ..++.|++.++.++|+.+++|+|+++.|+++.   ....+++.|||
T Consensus        97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~---~~~~~kl~dfg  173 (291)
T cd06639          97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLT---TEGGVKLVDFG  173 (291)
T ss_pred             CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEeecc
Confidence            468999999999999887642             11678999999999999999999999999994   45568999999


Q ss_pred             ceecCCCCCC-ccceeeccceecccc
Q psy14897         74 LAKNVPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      ++..+..... .....++..|.+||.
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~y~aPE~  199 (291)
T cd06639         174 VSAQLTSTRLRRNTSVGTPFWMAPEV  199 (291)
T ss_pred             cchhcccccccccCccCCccccChhh
Confidence            9886543221 122345666777763

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.50  E-value=1.6e-13  Score=85.64  Aligned_cols=72  Identities=22%  Similarity=0.248  Sum_probs=61.7

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++||||+.+|+|.+.+...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.++
T Consensus        81 ~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kL~dfg~~~  157 (279)
T cd05057          81 SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVK---TPQHVKITDFGLAK  157 (279)
T ss_pred             CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEc---CCCeEEECCCcccc
Confidence            5689999999999999987642          2779999999999999999999999999994   45568999999998


Q ss_pred             cCCCC
Q psy14897         77 NVPSS   81 (99)
Q Consensus        77 ~~~~~   81 (99)
                      .+...
T Consensus       158 ~~~~~  162 (279)
T cd05057         158 LLDVD  162 (279)
T ss_pred             cccCc
Confidence            76543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.50  E-value=1.1e-13  Score=85.01  Aligned_cols=89  Identities=22%  Similarity=0.303  Sum_probs=70.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +...++|+||+.+++|.+.+....         ++.|++.++.++|+.+++|+++++.|+++.   ....+++.|||.+.
T Consensus        74 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~---~~~~~kl~d~~~~~  150 (258)
T cd06632          74 EDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD---TNGVVKLADFGMAK  150 (258)
T ss_pred             CCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccCccce
Confidence            356899999999999998875432         678999999999999999999999999994   45669999999988


Q ss_pred             cCCCCCCccceeeccceeccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGR   97 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~   97 (99)
                      ............++..|.+||
T Consensus       151 ~~~~~~~~~~~~~~~~y~~pe  171 (258)
T cd06632         151 QVVEFSFAKSFKGSPYWMAPE  171 (258)
T ss_pred             eccccccccccCCCcceeCHH
Confidence            764433223345566677766

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.50  E-value=8.8e-14  Score=92.86  Aligned_cols=89  Identities=29%  Similarity=0.361  Sum_probs=69.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++|||++. ++|.+++..+          .++.|++.+|.|+|+++++|+|+++.|+++.   ....+++.|||++
T Consensus       232 ~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~---~~~~vkL~DFGla  307 (461)
T PHA03211        232 GGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN---GPEDICLGDFGAA  307 (461)
T ss_pred             CCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC---CCCCEEEcccCCc
Confidence            356789999995 5787776432          2789999999999999999999999999994   4456899999999


Q ss_pred             ecCCCCCC---ccceeeccceecccc
Q psy14897         76 KNVPSSPS---YERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~---~~~~~~t~~~~~~~~   98 (99)
                      +.+.....   ....+||..|.+||+
T Consensus       308 ~~~~~~~~~~~~~~~~GT~~Y~APE~  333 (461)
T PHA03211        308 CFARGSWSTPFHYGIAGTVDTNAPEV  333 (461)
T ss_pred             eecccccccccccccCCCcCCcCHHH
Confidence            86543221   123467888888875

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.50  E-value=1.5e-13  Score=85.23  Aligned_cols=90  Identities=17%  Similarity=0.245  Sum_probs=68.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.+|+|.+.+...           .++.|++.++.++|+.+++|+|+++.|+++.   ....+++.|||.
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~---~~~~~~L~dfg~  148 (262)
T cd05071          72 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGL  148 (262)
T ss_pred             CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc---CCCcEEeccCCc
Confidence            45679999999999999888641           2678999999999999999999999999995   455689999999


Q ss_pred             eecCCCCCCcc--ceeeccceecccc
Q psy14897         75 AKNVPSSPSYE--RHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~--~~~~t~~~~~~~~   98 (99)
                      +..+.......  ...++..|.+||.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~y~~PE~  174 (262)
T cd05071         149 ARLIEDNEYTARQGAKFPIKWTAPEA  174 (262)
T ss_pred             eeeccccccccccCCcccceecCHhH
Confidence            97664332211  1223445777763

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.50  E-value=1.3e-13  Score=86.11  Aligned_cols=89  Identities=20%  Similarity=0.289  Sum_probs=69.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhc-----cchHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQIS-----TGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS   80 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~-----~~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~   80 (99)
                      ++..++||||+.++++.....     ...++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||++..+..
T Consensus        71 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~---~~~~~~l~dfg~~~~~~~  147 (279)
T cd06619          71 ENRISICTEFMDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVN---TRGQVKLCDFGVSTQLVN  147 (279)
T ss_pred             CCEEEEEEecCCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEEC---CCCCEEEeeCCcceeccc
Confidence            356889999999998865432     123789999999999999999999999999995   456699999999887643


Q ss_pred             CCCccceeeccceecccc
Q psy14897         81 SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        81 ~~~~~~~~~t~~~~~~~~   98 (99)
                      .. ....+++..|.+||.
T Consensus       148 ~~-~~~~~~~~~y~aPE~  164 (279)
T cd06619         148 SI-AKTYVGTNAYMAPER  164 (279)
T ss_pred             cc-ccCCCCChhhcCcee
Confidence            32 233466777888874

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.49  E-value=1.4e-13  Score=88.45  Aligned_cols=65  Identities=28%  Similarity=0.441  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCCCCcc---ceeeccceeccc
Q psy14897         30 EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYE---RHVTTQTTRIGR   97 (99)
Q Consensus        30 ~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~~~---~~~~t~~~~~~~   97 (99)
                      ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++.+.......   ...++..|.+||
T Consensus       178 ~~~qi~~aL~~lH~~~ivHrDikp~Nill~---~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  245 (337)
T cd05054         178 YSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  245 (337)
T ss_pred             HHHHHHHHHHHHHhCCeecCCCCcceEEEe---CCCcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence            568999999999999999999999999995   44569999999998764433211   112344577776

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.49  E-value=1.4e-13  Score=86.69  Aligned_cols=72  Identities=26%  Similarity=0.461  Sum_probs=60.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRG   64 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~   64 (99)
                      ++..++||||+.+++|.+++...                     .++.|++.++.|+|+++++|+|++|.|+++.   ..
T Consensus        89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~---~~  165 (295)
T cd05097          89 DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVG---NH  165 (295)
T ss_pred             CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEc---CC
Confidence            45789999999999998887432                     1678999999999999999999999999994   44


Q ss_pred             CeEEEeeccceecCCC
Q psy14897         65 NLVYIIDFGLAKNVPS   80 (99)
Q Consensus        65 ~~~~l~d~g~a~~~~~   80 (99)
                      ..++++|||++..+..
T Consensus       166 ~~~kl~dfg~~~~~~~  181 (295)
T cd05097         166 YTIKIADFGMSRNLYS  181 (295)
T ss_pred             CcEEeccccccccccc
Confidence            5689999999876543

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.49  E-value=1.3e-13  Score=85.89  Aligned_cols=87  Identities=26%  Similarity=0.405  Sum_probs=69.8

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +..++||||+.+ ++.+.+..+          .++.|++.++.|+|+++++|+++++.|+++.   . ..+++.|||.+.
T Consensus        73 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~---~-~~~kl~dfg~~~  147 (282)
T cd07831          73 GRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK---D-DILKLADFGSCR  147 (282)
T ss_pred             CcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc---C-CCeEEEeccccc
Confidence            678999999975 777766532          2779999999999999999999999999995   3 679999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+..........++..|.+||.
T Consensus       148 ~~~~~~~~~~~~~~~~y~aPE~  169 (282)
T cd07831         148 GIYSKPPYTEYISTRWYRAPEC  169 (282)
T ss_pred             ccccCCCcCCCCCCcccCChhH
Confidence            7755544444556777888873

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.49  E-value=1.2e-13  Score=85.31  Aligned_cols=72  Identities=28%  Similarity=0.407  Sum_probs=61.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+++|.+++..+          .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+
T Consensus        71 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~dfg~~  147 (256)
T cd05059          71 QRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG---EDNVVKVSDFGLA  147 (256)
T ss_pred             CCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC---CCCcEEECCcccc
Confidence            35689999999999999887542          2679999999999999999999999999994   4556999999998


Q ss_pred             ecCCC
Q psy14897         76 KNVPS   80 (99)
Q Consensus        76 ~~~~~   80 (99)
                      +....
T Consensus       148 ~~~~~  152 (256)
T cd05059         148 RYVLD  152 (256)
T ss_pred             eeccc
Confidence            76543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.49  E-value=2.1e-13  Score=87.70  Aligned_cols=47  Identities=34%  Similarity=0.596  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897         30 EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus        30 ~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++..+.
T Consensus       184 ~~~qi~~al~~lH~~~i~H~dikp~Nil~~---~~~~~kl~dfg~~~~~~  230 (343)
T cd05103         184 YSFQVAKGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIY  230 (343)
T ss_pred             HHHHHHHHHHHHHhCCeecCCCccCeEEEc---CCCcEEEEecccccccc
Confidence            567999999999999999999999999995   44568999999988654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.49  E-value=1.4e-13  Score=86.53  Aligned_cols=89  Identities=27%  Similarity=0.436  Sum_probs=69.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+ +|+|.+.+...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++
T Consensus        74 ~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~---~~~~~~l~dfg~~  149 (298)
T cd07841          74 KSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA---SDGVLKLADFGLA  149 (298)
T ss_pred             CCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc---CCCCEEEccceee
Confidence            35689999999 88998887543          2779999999999999999999999999995   4556899999999


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ....... ......++..|.+||+
T Consensus       150 ~~~~~~~~~~~~~~~~~~y~aPE~  173 (298)
T cd07841         150 RSFGSPNRKMTHQVVTRWYRAPEL  173 (298)
T ss_pred             eeccCCCccccccccceeeeCHHH
Confidence            8765432 2223344556777763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.49  E-value=1.8e-13  Score=84.47  Aligned_cols=71  Identities=20%  Similarity=0.325  Sum_probs=60.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+|+|.+.+...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        71 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~d~g~~  147 (256)
T cd05114          71 QKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS---STGVVKVSDFGMT  147 (256)
T ss_pred             CCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc---CCCeEEECCCCCc
Confidence            35689999999999999887532          2678999999999999999999999999994   4566899999988


Q ss_pred             ecCC
Q psy14897         76 KNVP   79 (99)
Q Consensus        76 ~~~~   79 (99)
                      +...
T Consensus       148 ~~~~  151 (256)
T cd05114         148 RYVL  151 (256)
T ss_pred             cccC
Confidence            7653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.49  E-value=1.2e-13  Score=85.72  Aligned_cols=70  Identities=23%  Similarity=0.421  Sum_probs=58.9

Q ss_pred             CeEEEEEeeCCCCchhhhcc---------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          8 QSCLVFPYSYGTKSGEQIST---------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~---------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      ..++||||+.+|+|.+++..               ..++.|++.++.|+|+++++|+|++++|+++.   ....+++.||
T Consensus        80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Df  156 (272)
T cd05075          80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLN---ENMNVCVADF  156 (272)
T ss_pred             CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEc---CCCCEEECCC
Confidence            46899999999999887631               12678999999999999999999999999994   4556899999


Q ss_pred             cceecCCC
Q psy14897         73 GLAKNVPS   80 (99)
Q Consensus        73 g~a~~~~~   80 (99)
                      |.++.+..
T Consensus       157 g~~~~~~~  164 (272)
T cd05075         157 GLSKKIYN  164 (272)
T ss_pred             CcccccCc
Confidence            99887643

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG3653|consensus

Probab=99.49  E-value=1e-13  Score=91.13  Aligned_cols=90  Identities=19%  Similarity=0.244  Sum_probs=75.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhC---------CeeecCcCCCcEEEeeCCCCCeEE
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSR---------NFIHRDIKPDNFLMGLGKRGNLVY   68 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~---------~i~h~~l~~~~~l~~~~~~~~~~~   68 (99)
                      ..+.++|+||-..|+|-++|+.+        +++..++.||.|||+.         .|+|||++..|+++.   ++..+-
T Consensus       280 ~~eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK---~DlTcc  356 (534)
T KOG3653|consen  280 RMEYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVK---NDLTCC  356 (534)
T ss_pred             ccceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEc---cCCcEE
Confidence            45899999999999999999864        3788999999999963         599999999999994   667789


Q ss_pred             EeeccceecCCCCC---Cccceeeccceecccc
Q psy14897         69 IIDFGLAKNVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        69 l~d~g~a~~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                      ++|||+|..+.+..   .....+||+-|.+||+
T Consensus       357 IaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEv  389 (534)
T KOG3653|consen  357 IADFGLALRLEPGKPQGDTHGQVGTRRYMAPEV  389 (534)
T ss_pred             eeccceeEEecCCCCCcchhhhhhhhhhcCHHH
Confidence            99999999886442   2244689999999985

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.49  E-value=1.5e-13  Score=86.96  Aligned_cols=90  Identities=20%  Similarity=0.273  Sum_probs=68.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.+|+|.+++...           .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.
T Consensus       111 ~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~~l~dfg~  187 (302)
T cd05055         111 GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT---HGKIVKICDFGL  187 (302)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc---CCCeEEECCCcc
Confidence            35689999999999999887532           2678999999999999999999999999994   455689999999


Q ss_pred             eecCCCCCCcc---ceeeccceecccc
Q psy14897         75 AKNVPSSPSYE---RHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~---~~~~t~~~~~~~~   98 (99)
                      ++.+.......   ...++..|.+||.
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~  214 (302)
T cd05055         188 ARDIMNDSNYVVKGNARLPVKWMAPES  214 (302)
T ss_pred             cccccCCCceeecCCCCcccccCCHhh
Confidence            88764432211   1123445667763

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.49  E-value=1.3e-13  Score=86.09  Aligned_cols=89  Identities=27%  Similarity=0.463  Sum_probs=71.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ....++||||+ +++|.+.+..          ..++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+
T Consensus        71 ~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~---~~~~~~l~dfg~~  146 (286)
T cd07832          71 GSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS---ADGVLKIADFGLA  146 (286)
T ss_pred             CCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEc---CCCcEEEeeeeec
Confidence            45689999999 9999988743          22778999999999999999999999999995   4556899999998


Q ss_pred             ecCCCCC--Cccceeeccceecccc
Q psy14897         76 KNVPSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      .......  ......++..|.+||.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~y~aPE~  171 (286)
T cd07832         147 RLFSEEEPRLYSHQVATRWYRAPEL  171 (286)
T ss_pred             ccccCCCCCccccccCcccccCcee
Confidence            8765443  2334467778888874

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.49  E-value=1.2e-13  Score=86.19  Aligned_cols=90  Identities=28%  Similarity=0.423  Sum_probs=68.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc---------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST---------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~---------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ....++||||++++.+...+..         ..++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+.
T Consensus        72 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~  148 (286)
T cd07847          72 KRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT---KQGQIKLCDFGFAR  148 (286)
T ss_pred             CCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc---CCCcEEECccccce
Confidence            3468999999999888776542         22789999999999999999999999999994   44569999999998


Q ss_pred             cCCCCC-Cccceeeccceecccc
Q psy14897         77 NVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      .+.... ......++..|.+||.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~aPE~  171 (286)
T cd07847         149 ILTGPGDDYTDYVATRWYRAPEL  171 (286)
T ss_pred             ecCCCcccccCcccccccCCHHH
Confidence            765443 2222345566667663

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.49  E-value=1.3e-13  Score=85.16  Aligned_cols=72  Identities=22%  Similarity=0.397  Sum_probs=61.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.+|+|.+.+...           .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.
T Consensus        73 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~dfg~  149 (261)
T cd05072          73 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGL  149 (261)
T ss_pred             CCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec---CCCcEEECCCcc
Confidence            45689999999999999887532           2678999999999999999999999999994   556689999999


Q ss_pred             eecCCC
Q psy14897         75 AKNVPS   80 (99)
Q Consensus        75 a~~~~~   80 (99)
                      +.....
T Consensus       150 ~~~~~~  155 (261)
T cd05072         150 ARVIED  155 (261)
T ss_pred             ceecCC
Confidence            987643

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.49  E-value=1.6e-13  Score=84.80  Aligned_cols=71  Identities=24%  Similarity=0.428  Sum_probs=59.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+|+|.+++...          .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||++
T Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~---~~~~~kl~dfg~~  145 (262)
T cd05058          69 EGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD---ESFTVKVADFGLA  145 (262)
T ss_pred             CCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCcccc
Confidence            34578999999999999987532          1567999999999999999999999999994   4456899999998


Q ss_pred             ecCC
Q psy14897         76 KNVP   79 (99)
Q Consensus        76 ~~~~   79 (99)
                      +.+.
T Consensus       146 ~~~~  149 (262)
T cd05058         146 RDIY  149 (262)
T ss_pred             cccc
Confidence            7654

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.49  E-value=1.3e-13  Score=86.03  Aligned_cols=90  Identities=27%  Similarity=0.385  Sum_probs=70.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +...++||||+.+|+|.+.+..+.        ++.|++.++.|+|+.+++|+++++.|+++.   ....+++.|||.+..
T Consensus        74 ~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~---~~~~~~l~dfg~~~~  150 (277)
T cd06640          74 GTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQ  150 (277)
T ss_pred             CCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc---CCCCEEEccccccee
Confidence            456899999999999999886533        678999999999999999999999999995   455699999999877


Q ss_pred             CCCCCCc-cceeeccceecccc
Q psy14897         78 VPSSPSY-ERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~~-~~~~~t~~~~~~~~   98 (99)
                      +...... ....++..|.+||+
T Consensus       151 ~~~~~~~~~~~~~~~~y~apE~  172 (277)
T cd06640         151 LTDTQIKRNTFVGTPFWMAPEV  172 (277)
T ss_pred             ccCCccccccccCcccccCHhH
Confidence            6543321 22345666777774

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.49  E-value=1.8e-13  Score=84.92  Aligned_cols=73  Identities=19%  Similarity=0.325  Sum_probs=62.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+++|.+++...          .++.|++.++.++|+.+++|+|+++.|+++.   ....+++.|||.+
T Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~---~~~~~~l~dfg~~  153 (267)
T cd05066          77 SKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVN---SNLVCKVSDFGLS  153 (267)
T ss_pred             CCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEEC---CCCeEEeCCCCcc
Confidence            45789999999999999988642          2678999999999999999999999999994   4556899999998


Q ss_pred             ecCCCC
Q psy14897         76 KNVPSS   81 (99)
Q Consensus        76 ~~~~~~   81 (99)
                      ..+...
T Consensus       154 ~~~~~~  159 (267)
T cd05066         154 RVLEDD  159 (267)
T ss_pred             cccccc
Confidence            876543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.49  E-value=1.9e-13  Score=87.52  Aligned_cols=72  Identities=25%  Similarity=0.409  Sum_probs=60.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      ++..++||||+.+|+|.+++..+                         .++.|++.++.|+|+++++|+|+++.|+++. 
T Consensus        90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~-  168 (334)
T cd05100          90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT-  168 (334)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc-
Confidence            35689999999999999887532                         1578999999999999999999999999995 


Q ss_pred             CCCCCeEEEeeccceecCCC
Q psy14897         61 GKRGNLVYIIDFGLAKNVPS   80 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~~~~   80 (99)
                        ....+++.|||+++.+..
T Consensus       169 --~~~~~kL~Dfg~~~~~~~  186 (334)
T cd05100         169 --EDNVMKIADFGLARDVHN  186 (334)
T ss_pred             --CCCcEEECCcccceeccc
Confidence              445689999999886643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.49  E-value=2.2e-13  Score=84.81  Aligned_cols=90  Identities=21%  Similarity=0.321  Sum_probs=68.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGK   62 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~   62 (99)
                      ....++||||+.+++|.+++...                       .++.|++.++.++|+++++|+|+++.|+++.   
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~---  156 (280)
T cd05049          80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVG---  156 (280)
T ss_pred             CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEc---
Confidence            35789999999999999887532                       1578999999999999999999999999994   


Q ss_pred             CCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         63 RGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        63 ~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      ....+++.|||.+..+......   .....+..|.+||+
T Consensus       157 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~  195 (280)
T cd05049         157 YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPES  195 (280)
T ss_pred             CCCeEEECCcccceecccCcceecCCCCcccceecChhh
Confidence            4567999999998765332211   11223455777764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0193|consensus

Probab=99.49  E-value=5e-14  Score=94.77  Aligned_cols=89  Identities=21%  Similarity=0.308  Sum_probs=68.2

Q ss_pred             CCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ..+.+|.-+++|-+|..++..          ..+++|++.|+.|||+++|+|+|++..||++.   .+..+++.|||++.
T Consensus       460 p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~---~~~kVkIgDFGLat  536 (678)
T KOG0193|consen  460 PPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLH---EDLKVKIGDFGLAT  536 (678)
T ss_pred             CceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEc---cCCcEEEeccccee
Confidence            455788888888888887753          23889999999999999999999999999994   55779999999875


Q ss_pred             c---CCCCCCccceeeccceecccc
Q psy14897         77 N---VPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~---~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .   +....+...-.+...|.+||+
T Consensus       537 vk~~w~g~~q~~qp~gsilwmAPEv  561 (678)
T KOG0193|consen  537 VKTRWSGEQQLEQPHGSLLWMAPEV  561 (678)
T ss_pred             eeeeeccccccCCCccchhhhcHHH
Confidence            3   233333334445566677775

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.48  E-value=1.8e-13  Score=84.32  Aligned_cols=71  Identities=20%  Similarity=0.328  Sum_probs=59.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.+++|.+++...           .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.
T Consensus        70 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~---~~~~~kl~Dfg~  146 (254)
T cd05083          70 HNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS---EDGVAKVSDFGL  146 (254)
T ss_pred             CCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCcEEECCCcc
Confidence            35579999999999999887532           1678999999999999999999999999994   445689999999


Q ss_pred             eecCC
Q psy14897         75 AKNVP   79 (99)
Q Consensus        75 a~~~~   79 (99)
                      +....
T Consensus       147 ~~~~~  151 (254)
T cd05083         147 ARVGS  151 (254)
T ss_pred             ceecc
Confidence            87643

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.48  E-value=2.3e-13  Score=84.44  Aligned_cols=72  Identities=18%  Similarity=0.329  Sum_probs=60.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +...++||||+.+|+|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~---~~~~~kl~dfg~~  153 (269)
T cd05065          77 SRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVN---SNLVCKVSDFGLS  153 (269)
T ss_pred             CCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEc---CCCcEEECCCccc
Confidence            45689999999999999887642          2678999999999999999999999999994   4556899999988


Q ss_pred             ecCCC
Q psy14897         76 KNVPS   80 (99)
Q Consensus        76 ~~~~~   80 (99)
                      ..+..
T Consensus       154 ~~~~~  158 (269)
T cd05065         154 RFLED  158 (269)
T ss_pred             ccccc
Confidence            76543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.48  E-value=9.8e-14  Score=87.57  Aligned_cols=90  Identities=28%  Similarity=0.430  Sum_probs=70.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ++..++||||+.+++|.+++...        .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+..
T Consensus        88 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~---~~~~~~l~Dfg~~~~  164 (297)
T cd06656          88 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQ  164 (297)
T ss_pred             CCEEEEeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEECcCccceE
Confidence            45689999999999999887542        2678999999999999999999999999994   455689999999876


Q ss_pred             CCCCCCc-cceeeccceecccc
Q psy14897         78 VPSSPSY-ERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~~-~~~~~t~~~~~~~~   98 (99)
                      ....... ....++..|.+||.
T Consensus       165 ~~~~~~~~~~~~~~~~y~aPE~  186 (297)
T cd06656         165 ITPEQSKRSTMVGTPYWMAPEV  186 (297)
T ss_pred             ccCCccCcCcccCCccccCHHH
Confidence            5443322 22345666777763

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.48  E-value=2.2e-13  Score=85.60  Aligned_cols=90  Identities=18%  Similarity=0.285  Sum_probs=68.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.++++...+..          ..++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+
T Consensus        81 ~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~  157 (292)
T cd06644          81 DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT---LDGDIKLADFGVS  157 (292)
T ss_pred             CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc---CCCCEEEccCccc
Confidence            4578999999999999876642          12789999999999999999999999999994   4556999999988


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ....... ......++..|.+||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~y~aPE~  181 (292)
T cd06644         158 AKNVKTLQRRDSFIGTPYWMAPEV  181 (292)
T ss_pred             eeccccccccceecCCccccCcee
Confidence            7543321 1223345666777764

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.48  E-value=1.8e-13  Score=84.60  Aligned_cols=71  Identities=24%  Similarity=0.350  Sum_probs=60.5

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++||||+.+|+|.+++...          .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.++
T Consensus        72 ~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~d~g~~~  148 (256)
T cd05113          72 RPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD---DQGCVKVSDFGLSR  148 (256)
T ss_pred             CCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCCEEECCCccce
Confidence            4579999999999999887532          2779999999999999999999999999994   45569999999987


Q ss_pred             cCCC
Q psy14897         77 NVPS   80 (99)
Q Consensus        77 ~~~~   80 (99)
                      ....
T Consensus       149 ~~~~  152 (256)
T cd05113         149 YVLD  152 (256)
T ss_pred             ecCC
Confidence            6543

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.48  E-value=2e-13  Score=84.26  Aligned_cols=71  Identities=20%  Similarity=0.295  Sum_probs=61.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.+++|.+++...           .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.
T Consensus        74 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~---~~~~~kl~d~g~  150 (261)
T cd05148          74 GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG---EDLVCKVADFGL  150 (261)
T ss_pred             CCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc---CCceEEEccccc
Confidence            35689999999999999988642           2778999999999999999999999999994   556699999999


Q ss_pred             eecCC
Q psy14897         75 AKNVP   79 (99)
Q Consensus        75 a~~~~   79 (99)
                      +....
T Consensus       151 ~~~~~  155 (261)
T cd05148         151 ARLIK  155 (261)
T ss_pred             hhhcC
Confidence            87654

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.48  E-value=1.3e-13  Score=85.75  Aligned_cols=90  Identities=16%  Similarity=0.267  Sum_probs=68.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCe
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNL   66 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~   66 (99)
                      ....++||||+.+|+|.+++...                   .++.|++.++.|+|+.+++|+|+++.|+++.   ....
T Consensus        81 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~---~~~~  157 (277)
T cd05032          81 GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA---EDLT  157 (277)
T ss_pred             CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEc---CCCC
Confidence            45789999999999999887531                   2678999999999999999999999999995   4556


Q ss_pred             EEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         67 VYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        67 ~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      +++.|||.++.+......   ....++..|.+||.
T Consensus       158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  192 (277)
T cd05032         158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPES  192 (277)
T ss_pred             EEECCcccchhhccCcccccCCCCCccccccCHHH
Confidence            899999998765433211   12234455667763

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.48  E-value=1.4e-13  Score=84.94  Aligned_cols=90  Identities=28%  Similarity=0.340  Sum_probs=71.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +...++|+||+.+++|.+.+...         .++.|++.++.|+|+++++|+++++.|+++.   ....+++.|||.+.
T Consensus        72 ~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~---~~~~~~l~d~~~~~  148 (258)
T cd05578          72 EENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLD---EQGHVHITDFNIAT  148 (258)
T ss_pred             CCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEc---CCCCEEEeeccccc
Confidence            45689999999999999888654         2678999999999999999999999999994   45568999999988


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ............++..|.+||+
T Consensus       149 ~~~~~~~~~~~~~~~~y~~PE~  170 (258)
T cd05578         149 KVTPDTLTTSTSGTPGYMAPEV  170 (258)
T ss_pred             ccCCCccccccCCChhhcCHHH
Confidence            7654433333445566666663

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG1151|consensus

Probab=99.48  E-value=1.8e-13  Score=90.33  Aligned_cols=94  Identities=22%  Similarity=0.284  Sum_probs=76.3

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhC--CeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSR--NFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~--~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      +.+.+|-|+||++|.||+-+|+.++         +..||+.++.||...  .|+|-|++|.||++-....+..+|+.|||
T Consensus       539 DtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG  618 (775)
T KOG1151|consen  539 DTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG  618 (775)
T ss_pred             ccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence            4567899999999999999997654         778999999999975  69999999999998544446679999999


Q ss_pred             ceecCCCCCCc--------cceeeccceecccc
Q psy14897         74 LAKNVPSSPSY--------ERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~~--------~~~~~t~~~~~~~~   98 (99)
                      +++.+.+....        ....||.||.+||.
T Consensus       619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEc  651 (775)
T KOG1151|consen  619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPEC  651 (775)
T ss_pred             hhhhccCCccCcccceeeecccCceeeecCcce
Confidence            99987554321        33467999999985

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.48  E-value=1.1e-13  Score=87.32  Aligned_cols=90  Identities=21%  Similarity=0.320  Sum_probs=71.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ++..++||||+.+++|.+.+....        ++.|++.++.++|+.+++|+|+++.|+++.   ....+++.|||++..
T Consensus        90 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~---~~~~~kL~dfg~~~~  166 (297)
T cd06659          90 GEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLT---LDGRVKLSDFGFCAQ  166 (297)
T ss_pred             CCeEEEEEecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEc---cCCcEEEeechhHhh
Confidence            467899999999999988775432        779999999999999999999999999995   455699999999876


Q ss_pred             CCCCC-Cccceeeccceecccc
Q psy14897         78 VPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +.... ......++..|.+||.
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~  188 (297)
T cd06659         167 ISKDVPKRKSLVGTPYWMAPEV  188 (297)
T ss_pred             cccccccccceecCccccCHHH
Confidence            54332 1223456777877774

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.48  E-value=2.5e-13  Score=84.03  Aligned_cols=72  Identities=25%  Similarity=0.410  Sum_probs=60.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.+|+|.+++...           .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.
T Consensus        72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~---~~~~~~l~dfg~  148 (260)
T cd05069          72 EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG---DNLVCKIADFGL  148 (260)
T ss_pred             CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCeEEECCCcc
Confidence            45679999999999999887532           2678999999999999999999999999994   455689999999


Q ss_pred             eecCCC
Q psy14897         75 AKNVPS   80 (99)
Q Consensus        75 a~~~~~   80 (99)
                      +.....
T Consensus       149 ~~~~~~  154 (260)
T cd05069         149 ARLIED  154 (260)
T ss_pred             ceEccC
Confidence            876543

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.48  E-value=1.4e-13  Score=87.10  Aligned_cols=71  Identities=24%  Similarity=0.421  Sum_probs=60.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      .+..++||||+.+|+|.+++..+                         .++.|++.++.|+|+++++|+|+++.|+++. 
T Consensus        96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~-  174 (307)
T cd05098          96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-  174 (307)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEc-
Confidence            35689999999999999888532                         2678999999999999999999999999995 


Q ss_pred             CCCCCeEEEeeccceecCC
Q psy14897         61 GKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~~~   79 (99)
                        ....+++.|||.+..+.
T Consensus       175 --~~~~~kL~dfg~a~~~~  191 (307)
T cd05098         175 --EDNVMKIADFGLARDIH  191 (307)
T ss_pred             --CCCcEEECCCccccccc
Confidence              44568999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.48  E-value=1.8e-13  Score=85.35  Aligned_cols=90  Identities=28%  Similarity=0.388  Sum_probs=70.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ++..++||||+.+++|.+.+..+.        ++.|++.++.|+|+++++|+++++.|+++.   ....+++.|||++..
T Consensus        74 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~---~~~~~~l~dfg~~~~  150 (277)
T cd06642          74 GTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQ  150 (277)
T ss_pred             CCceEEEEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe---CCCCEEEcccccccc
Confidence            456899999999999998876532        678999999999999999999999999995   445689999999877


Q ss_pred             CCCCCC-ccceeeccceecccc
Q psy14897         78 VPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      +..... .....++..|.+||+
T Consensus       151 ~~~~~~~~~~~~~~~~y~aPE~  172 (277)
T cd06642         151 LTDTQIKRNTFVGTPFWMAPEV  172 (277)
T ss_pred             ccCcchhhhcccCcccccCHHH
Confidence            654321 122345666777764

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.48  E-value=1.9e-13  Score=85.77  Aligned_cols=89  Identities=19%  Similarity=0.246  Sum_probs=67.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc---------------------------------chHHHHHHHHHHHHhhCCeeecCcC
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST---------------------------------GKEDREWIGRIDYIHSRNFIHRDIK   52 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~---------------------------------~~~~~~i~~~l~~lh~~~i~h~~l~   52 (99)
                      ++..++||||+.+|+|.+++..                                 ..++.|++.++.|+|+.+++|+|++
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik  154 (290)
T cd05045          75 DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA  154 (290)
T ss_pred             CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence            3568899999999999987643                                 1367899999999999999999999


Q ss_pred             CCcEEEeeCCCCCeEEEeeccceecCCCCCCc---cceeeccceeccc
Q psy14897         53 PDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGR   97 (99)
Q Consensus        53 ~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~   97 (99)
                      +.|+++.   ....+++.|||+++.+.....+   ....++..|.+||
T Consensus       155 p~nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE  199 (290)
T cd05045         155 ARNVLVA---EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIE  199 (290)
T ss_pred             hheEEEc---CCCcEEeccccccccccCccchhcccCCCCCccccCHH
Confidence            9999994   4566899999998865433221   1122334566665

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.47  E-value=2.5e-13  Score=83.75  Aligned_cols=71  Identities=23%  Similarity=0.380  Sum_probs=61.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.+++|.++++..           .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.
T Consensus        72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~---~~~~~~l~d~g~  148 (256)
T cd05039          72 GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS---EDLVAKVSDFGL  148 (256)
T ss_pred             CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe---CCCCEEEccccc
Confidence            56789999999999999987542           2779999999999999999999999999995   445689999999


Q ss_pred             eecCC
Q psy14897         75 AKNVP   79 (99)
Q Consensus        75 a~~~~   79 (99)
                      ++...
T Consensus       149 ~~~~~  153 (256)
T cd05039         149 AKEAS  153 (256)
T ss_pred             ccccc
Confidence            88764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.47  E-value=1.8e-13  Score=92.14  Aligned_cols=88  Identities=20%  Similarity=0.243  Sum_probs=67.5

Q ss_pred             CCeEEEEEeeCCCCchhhhcc--------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST--------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~--------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      +..++|+|++.+ ++.+++..              ..++.|++.+|.|||+++++|+|+++.|+++.   ....+++.||
T Consensus       236 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~---~~~~vkL~DF  311 (501)
T PHA03210        236 ANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLN---CDGKIVLGDF  311 (501)
T ss_pred             CeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEEEeC
Confidence            467899998864 55554421              23789999999999999999999999999994   4556999999


Q ss_pred             cceecCCCCCCc--cceeeccceecccc
Q psy14897         73 GLAKNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      |+++.+......  ...+||..|.+||+
T Consensus       312 Gla~~~~~~~~~~~~~~~gt~~y~aPE~  339 (501)
T PHA03210        312 GTAMPFEKEREAFDYGWVGTVATNSPEI  339 (501)
T ss_pred             CCceecCcccccccccccCCcCCCCchh
Confidence            999877543221  23468888888885

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.47  E-value=3.3e-13  Score=84.19  Aligned_cols=89  Identities=30%  Similarity=0.483  Sum_probs=71.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++||||+ +|++.+.+...           .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.
T Consensus        70 ~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~---~~~~~~l~d~~~  145 (283)
T cd07830          70 NDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS---GPEVVKIADFGL  145 (283)
T ss_pred             CCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCCEEEeeccc
Confidence            56789999999 77888777542           1678999999999999999999999999995   456699999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.............++..|.+||.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~aPE~  169 (283)
T cd07830         146 AREIRSRPPYTDYVSTRWYRAPEI  169 (283)
T ss_pred             ceeccCCCCcCCCCCcccccCcee
Confidence            987765544444556677777773

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG4279|consensus

Probab=99.47  E-value=1.6e-13  Score=94.37  Aligned_cols=90  Identities=20%  Similarity=0.283  Sum_probs=75.6

Q ss_pred             CCeEEEEEeeCCCCchhhhccch------------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK------------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~------------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      +.+-+-||-+.||+|.+.|+...            +..||+.|++|||.+.|+|||+|-.|+++.  ...+.+|++|||.
T Consensus       645 Gf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TySGvlKISDFGT  722 (1226)
T KOG4279|consen  645 GFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYSGVLKISDFGT  722 (1226)
T ss_pred             CeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--eccceEEeccccc
Confidence            44567899999999999987532            779999999999999999999999999985  5677899999999


Q ss_pred             eecCCCCCC-ccceeeccceecccc
Q psy14897         75 AKNVPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      ++.+..-.+ ..++-||..|.+||+
T Consensus       723 sKRLAginP~TETFTGTLQYMAPEv  747 (1226)
T KOG4279|consen  723 SKRLAGINPCTETFTGTLQYMAPEV  747 (1226)
T ss_pred             chhhccCCccccccccchhhhChHh
Confidence            998755433 356778999999885

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.47  E-value=2.9e-13  Score=89.05  Aligned_cols=65  Identities=26%  Similarity=0.445  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCCCCc---cceeeccceeccc
Q psy14897         30 EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGR   97 (99)
Q Consensus        30 ~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~   97 (99)
                      ++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||+++.+......   ....++..|.+||
T Consensus       244 ~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~---~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE  311 (401)
T cd05107         244 FSYQVANGMEFLASKNCVHRDLAARNVLIC---EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPE  311 (401)
T ss_pred             HHHHHHHHHHHHhcCCcCcccCCcceEEEe---CCCEEEEEecCcceecccccccccCCCcCCCCceeChH
Confidence            456999999999999999999999999995   4566899999999865332211   1223445566665

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.47  E-value=2.6e-13  Score=84.29  Aligned_cols=73  Identities=21%  Similarity=0.333  Sum_probs=61.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +...++||||+.+|+|.+++...          .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||++
T Consensus        78 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~  154 (270)
T cd05056          78 ENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVS---SPDCVKLGDFGLS  154 (270)
T ss_pred             CCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEe---cCCCeEEccCcee
Confidence            45678999999999999988642          1678999999999999999999999999995   4456899999998


Q ss_pred             ecCCCC
Q psy14897         76 KNVPSS   81 (99)
Q Consensus        76 ~~~~~~   81 (99)
                      +.....
T Consensus       155 ~~~~~~  160 (270)
T cd05056         155 RYLEDE  160 (270)
T ss_pred             eecccc
Confidence            866443

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.47  E-value=1.2e-13  Score=86.20  Aligned_cols=89  Identities=22%  Similarity=0.335  Sum_probs=67.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhC-CeeecCcCCCcEEEeeCCCCCeEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSR-NFIHRDIKPDNFLMGLGKRGNLVYIID   71 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~-~i~h~~l~~~~~l~~~~~~~~~~~l~d   71 (99)
                      ++..++||||++ |+|.+.+..             ..++.|++.++.|+|++ +++|+|+++.|+++.   ....+++.|
T Consensus        72 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~---~~~~~kl~d  147 (283)
T cd06617          72 EGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLIN---RNGQVKLCD  147 (283)
T ss_pred             CCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---CCCCEEEee
Confidence            467899999997 466665532             12778999999999997 999999999999994   455699999


Q ss_pred             ccceecCCCCCCccceeeccceecccc
Q psy14897         72 FGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        72 ~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ||.++.+..........++..|.+||.
T Consensus       148 fg~~~~~~~~~~~~~~~~~~~y~aPE~  174 (283)
T cd06617         148 FGISGYLVDSVAKTIDAGCKPYMAPER  174 (283)
T ss_pred             cccccccccccccccccCCccccChhh
Confidence            999887654333233456667777763

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.47  E-value=3e-13  Score=83.59  Aligned_cols=90  Identities=21%  Similarity=0.268  Sum_probs=68.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ....++||||+.+++|.+.+..           ..++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~---~~~~~~l~dfg~  148 (260)
T cd05070          72 EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG---DGLVCKIADFGL  148 (260)
T ss_pred             CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe---CCceEEeCCcee
Confidence            3567999999999999988753           22678999999999999999999999999995   455689999999


Q ss_pred             eecCCCCCCcc--ceeeccceecccc
Q psy14897         75 AKNVPSSPSYE--RHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~--~~~~t~~~~~~~~   98 (99)
                      +..+.......  ...++..|.+||.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~y~aPE~  174 (260)
T cd05070         149 ARLIEDNEYTARQGAKFPIKWTAPEA  174 (260)
T ss_pred             eeeccCcccccccCCCCCccccChHH
Confidence            98764432111  1122345677763

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.47  E-value=3.2e-13  Score=83.73  Aligned_cols=72  Identities=18%  Similarity=0.314  Sum_probs=61.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+++|.+++...          .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||++
T Consensus        78 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~  154 (268)
T cd05063          78 FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVN---SNLECKVSDFGLS  154 (268)
T ss_pred             CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEc---CCCcEEECCCccc
Confidence            35689999999999998887542          2678999999999999999999999999994   4556899999998


Q ss_pred             ecCCC
Q psy14897         76 KNVPS   80 (99)
Q Consensus        76 ~~~~~   80 (99)
                      .....
T Consensus       155 ~~~~~  159 (268)
T cd05063         155 RVLED  159 (268)
T ss_pred             eeccc
Confidence            76643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.47  E-value=2.4e-13  Score=85.17  Aligned_cols=88  Identities=24%  Similarity=0.264  Sum_probs=67.7

Q ss_pred             CCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ...++||||+.+|+|.+.+..+.         ++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||+++.
T Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~---~~~~~~l~dfg~~~~  154 (288)
T cd05583          78 TKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD---SEGHVVLTDFGLSKE  154 (288)
T ss_pred             CEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEEECccccc
Confidence            46789999999999988875422         678999999999999999999999999995   445689999999877


Q ss_pred             CCCCCCc--cceeeccceeccc
Q psy14897         78 VPSSPSY--ERHVTTQTTRIGR   97 (99)
Q Consensus        78 ~~~~~~~--~~~~~t~~~~~~~   97 (99)
                      +......  ....++..|.+||
T Consensus       155 ~~~~~~~~~~~~~~~~~y~aPE  176 (288)
T cd05583         155 FLAEEEERAYSFCGTIEYMAPE  176 (288)
T ss_pred             cccccccccccccCCccccCHH
Confidence            5443221  1123555666665

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.47  E-value=2.3e-13  Score=85.89  Aligned_cols=90  Identities=26%  Similarity=0.407  Sum_probs=71.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      .+..++|+||+.+++|.+.+....        ++.|++.++.+||+.+++|+|+++.|+++.   ....+++.|||++..
T Consensus        88 ~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~---~~~~~kl~dfg~~~~  164 (296)
T cd06655          88 GDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG---MDGSVKLTDFGFCAQ  164 (296)
T ss_pred             CceEEEEEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccCccchh
Confidence            457899999999999998876532        678899999999999999999999999994   456699999999876


Q ss_pred             CCCCCCc-cceeeccceecccc
Q psy14897         78 VPSSPSY-ERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~~-~~~~~t~~~~~~~~   98 (99)
                      +...... ....++..|.+||.
T Consensus       165 ~~~~~~~~~~~~~~~~y~aPE~  186 (296)
T cd06655         165 ITPEQSKRSTMVGTPYWMAPEV  186 (296)
T ss_pred             cccccccCCCcCCCccccCcch
Confidence            5443322 22356677777774

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.47  E-value=3.6e-13  Score=82.71  Aligned_cols=71  Identities=25%  Similarity=0.389  Sum_probs=60.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+++|.+.+...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++
T Consensus        64 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~  140 (250)
T cd05085          64 RQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMS  140 (250)
T ss_pred             CCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEc---CCCeEEECCCccc
Confidence            35689999999999999887532          2678899999999999999999999999994   4566899999998


Q ss_pred             ecCC
Q psy14897         76 KNVP   79 (99)
Q Consensus        76 ~~~~   79 (99)
                      ....
T Consensus       141 ~~~~  144 (250)
T cd05085         141 RQED  144 (250)
T ss_pred             eecc
Confidence            7543

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.47  E-value=2e-13  Score=85.19  Aligned_cols=90  Identities=19%  Similarity=0.295  Sum_probs=69.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ....++||||+.+++|.+.+...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        74 ~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~---~~~~~~l~d~g~~  150 (280)
T cd06611          74 ENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT---LDGDVKLADFGVS  150 (280)
T ss_pred             CCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEC---CCCCEEEccCccc
Confidence            45689999999999999887542          2789999999999999999999999999994   4566999999987


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ....... ......++..|.+||.
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~~PE~  174 (280)
T cd06611         151 AKNKSTLQKRDTFIGTPYWMAPEV  174 (280)
T ss_pred             hhhcccccccceeecchhhcCHHH
Confidence            6553322 1122345556666653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.47  E-value=2.5e-13  Score=84.55  Aligned_cols=90  Identities=27%  Similarity=0.360  Sum_probs=70.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +...++||||+.+++|.++++...        ++.|++.++.|+|+.+++|+++++.|+++.   ....+++.|||.+..
T Consensus        74 ~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~  150 (277)
T cd06917          74 GPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT---NTGNVKLCDFGVAAL  150 (277)
T ss_pred             CCEEEEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc---CCCCEEEccCCceee
Confidence            456889999999999988876532        678999999999999999999999999995   456699999999887


Q ss_pred             CCCCCC-ccceeeccceecccc
Q psy14897         78 VPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      +..... .....++..|.+||.
T Consensus       151 ~~~~~~~~~~~~~~~~y~aPE~  172 (277)
T cd06917         151 LNQNSSKRSTFVGTPYWMAPEV  172 (277)
T ss_pred             cCCCccccccccCCcceeCHHH
Confidence            654321 122345666777763

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.46  E-value=3.2e-13  Score=85.55  Aligned_cols=70  Identities=21%  Similarity=0.360  Sum_probs=59.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..+++|||+.+|++.+.+...           .++.|++.++.|||+++++|+|+++.|+++.   ....+++.||+.
T Consensus        71 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~---~~~~~kl~d~~~  147 (314)
T cd08216          71 DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS---GDGKVVLSGLRY  147 (314)
T ss_pred             CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe---cCCceEEecCcc
Confidence            45689999999999998887642           2678999999999999999999999999995   445689999998


Q ss_pred             eecC
Q psy14897         75 AKNV   78 (99)
Q Consensus        75 a~~~   78 (99)
                      +..+
T Consensus       148 ~~~~  151 (314)
T cd08216         148 SVSM  151 (314)
T ss_pred             ceee
Confidence            7655

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0664|consensus

Probab=99.46  E-value=2.7e-15  Score=93.76  Aligned_cols=66  Identities=32%  Similarity=0.513  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCCCC--ccceeeccceecccc
Q psy14897         30 EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS--YERHVTTQTTRIGRI   98 (99)
Q Consensus        30 ~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~--~~~~~~t~~~~~~~~   98 (99)
                      +..||+.|++|+|+.+|.|||+||.|+++   .....+|+.|||+++.......  .+.-+.|+.|++|||
T Consensus       161 FlYQILRGLKYLHsA~ILHRDIKPGNLLV---NSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEi  228 (449)
T KOG0664|consen  161 FVYQILRGLKYLHTANILHRDIKPGNLLV---NSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPEL  228 (449)
T ss_pred             hHHHHHhhhHHHhhcchhhccCCCccEEe---ccCceEEecccccccccchhhhhhhHHHHHHHHhccHHH
Confidence            77999999999999999999999999999   4566789999999998755432  244577999999986

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.46  E-value=3e-13  Score=85.81  Aligned_cols=70  Identities=27%  Similarity=0.450  Sum_probs=59.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++||||+.+++|.+.+...           .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||+
T Consensus        73 ~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~  149 (316)
T cd05574          73 ETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH---ESGHIMLSDFDL  149 (316)
T ss_pred             CCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc---CCCCEEEeecch
Confidence            35689999999999999987642           1678999999999999999999999999995   445689999998


Q ss_pred             eecC
Q psy14897         75 AKNV   78 (99)
Q Consensus        75 a~~~   78 (99)
                      +...
T Consensus       150 ~~~~  153 (316)
T cd05574         150 SKQS  153 (316)
T ss_pred             hhcc
Confidence            7654

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.46  E-value=3.8e-13  Score=83.02  Aligned_cols=73  Identities=19%  Similarity=0.298  Sum_probs=62.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+++...         .++.|++.++.++|..+++|+|++++|+++.   ....+++.|||.++
T Consensus        67 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~---~~~~~kl~df~~~~  143 (257)
T cd05060          67 GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV---NRHQAKISDFGMSR  143 (257)
T ss_pred             CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc---CCCcEEeccccccc
Confidence            35679999999999999988642         2789999999999999999999999999995   45568999999988


Q ss_pred             cCCCC
Q psy14897         77 NVPSS   81 (99)
Q Consensus        77 ~~~~~   81 (99)
                      .+...
T Consensus       144 ~~~~~  148 (257)
T cd05060         144 ALGAG  148 (257)
T ss_pred             eeecC
Confidence            76433

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.46  E-value=3.9e-13  Score=83.42  Aligned_cols=91  Identities=21%  Similarity=0.290  Sum_probs=69.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      ++..++||||+.+++|.+.+...            .++.|++.++.|+|+++++|+++++.|+++.  .....+++.|||
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~--~~~~~~~l~dfg  154 (268)
T cd06624          77 NGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVN--TYSGVVKISDFG  154 (268)
T ss_pred             CCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc--CCCCeEEEecch
Confidence            45689999999999999987642            1568999999999999999999999999995  224568999999


Q ss_pred             ceecCCCCCC-ccceeeccceecccc
Q psy14897         74 LAKNVPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      .+..+..... .....++..|.+||+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~aPE~  180 (268)
T cd06624         155 TSKRLAGINPCTETFTGTLQYMAPEV  180 (268)
T ss_pred             hheecccCCCccccCCCCccccChhh
Confidence            9876543221 122345666777763

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.46  E-value=3.9e-13  Score=83.08  Aligned_cols=90  Identities=21%  Similarity=0.245  Sum_probs=69.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      ++..++||||+.+|+|.+.+..             ..++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.||
T Consensus        74 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~---~~~~~~l~d~  150 (267)
T cd08224          74 NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT---ATGVVKLGDL  150 (267)
T ss_pred             CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC---CCCcEEEecc
Confidence            3568999999999999887742             12678999999999999999999999999994   4456899999


Q ss_pred             cceecCCCCCC-ccceeeccceecccc
Q psy14897         73 GLAKNVPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      |.+..+..... .....++..|.+||.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~y~apE~  177 (267)
T cd08224         151 GLGRFFSSKTTAAHSLVGTPYYMSPER  177 (267)
T ss_pred             ceeeeccCCCcccceecCCccccCHHH
Confidence            99876543321 122345666777763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.46  E-value=2.6e-13  Score=84.19  Aligned_cols=89  Identities=24%  Similarity=0.303  Sum_probs=68.8

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ..++++|||+.+++|.+.+...         .++.|++.++.++|+.+++|+++++.|+++.   ....+++.|||+++.
T Consensus        79 ~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~---~~~~~~l~dfg~~~~  155 (266)
T cd06651          79 KTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKR  155 (266)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEccCCCccc
Confidence            4678999999999999887542         2789999999999999999999999999984   445689999999876


Q ss_pred             CCCCC----Cccceeeccceecccc
Q psy14897         78 VPSSP----SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~----~~~~~~~t~~~~~~~~   98 (99)
                      +....    ......++..|.+||.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~  180 (266)
T cd06651         156 LQTICMSGTGIRSVTGTPYWMSPEV  180 (266)
T ss_pred             cccccccCCccccCCccccccCHHH
Confidence            53321    1122345666777764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.46  E-value=3.5e-13  Score=85.21  Aligned_cols=69  Identities=29%  Similarity=0.518  Sum_probs=59.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+++|.++++..         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.++
T Consensus        73 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~---~~~~~~l~dfg~~~  149 (305)
T cd05609          73 KRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSK  149 (305)
T ss_pred             CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEEC---CCCCEEEeeCCCcc
Confidence            34679999999999999888542         2678999999999999999999999999994   45568999999876


Q ss_pred             c
Q psy14897         77 N   77 (99)
Q Consensus        77 ~   77 (99)
                      .
T Consensus       150 ~  150 (305)
T cd05609         150 I  150 (305)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.46  E-value=4e-13  Score=83.26  Aligned_cols=71  Identities=25%  Similarity=0.428  Sum_probs=59.7

Q ss_pred             CeEEEEEeeCCCCchhhhccc---------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG---------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~---------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      ..++||||+.+|+|.+.+...               .++.|++.++.|+|+++++|+|++++|+++.   ....+++.||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLR---EDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEEC---CCCeEEECCc
Confidence            478999999999998877321               1678999999999999999999999999994   4567899999


Q ss_pred             cceecCCCC
Q psy14897         73 GLAKNVPSS   81 (99)
Q Consensus        73 g~a~~~~~~   81 (99)
                      |.++.....
T Consensus       158 g~~~~~~~~  166 (273)
T cd05035         158 GLSKKIYSG  166 (273)
T ss_pred             cceeecccc
Confidence            999876433

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.46  E-value=3.8e-13  Score=83.37  Aligned_cols=71  Identities=20%  Similarity=0.366  Sum_probs=61.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+++|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        77 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~---~~~~~~l~dfg~~  153 (266)
T cd05033          77 SRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVN---SNLVCKVSDFGLS  153 (266)
T ss_pred             CCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCCEEECccchh
Confidence            45689999999999999987542          2678999999999999999999999999994   4556899999999


Q ss_pred             ecCC
Q psy14897         76 KNVP   79 (99)
Q Consensus        76 ~~~~   79 (99)
                      ..+.
T Consensus       154 ~~~~  157 (266)
T cd05033         154 RRLE  157 (266)
T ss_pred             hccc
Confidence            8764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.46  E-value=2.4e-13  Score=84.14  Aligned_cols=71  Identities=27%  Similarity=0.467  Sum_probs=61.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.++++..         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.++
T Consensus        78 ~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~---~~~~~~l~dfg~~~  154 (267)
T cd06628          78 ADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVD---NKGGIKISDFGISK  154 (267)
T ss_pred             CCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEc---CCCCEEecccCCCc
Confidence            45789999999999998888542         3779999999999999999999999999994   45568999999987


Q ss_pred             cCC
Q psy14897         77 NVP   79 (99)
Q Consensus        77 ~~~   79 (99)
                      .+.
T Consensus       155 ~~~  157 (267)
T cd06628         155 KLE  157 (267)
T ss_pred             ccc
Confidence            764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.46  E-value=3.1e-13  Score=84.82  Aligned_cols=89  Identities=24%  Similarity=0.379  Sum_probs=67.6

Q ss_pred             CCeEEEEEeeCCCCchhhhccc--------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCe
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG--------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNL   66 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~--------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~   66 (99)
                      ...++||||+.+++|.+++...                    .++.|++.++.|+|+.+++|+|+++.|+++.   ....
T Consensus        92 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~---~~~~  168 (296)
T cd05051          92 PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVG---KNYT  168 (296)
T ss_pred             CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeec---CCCc
Confidence            5789999999999999887432                    2678999999999999999999999999995   4466


Q ss_pred             EEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         67 VYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        67 ~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      +++.|||.++.+......   ....++..|.+||.
T Consensus       169 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  203 (296)
T cd05051         169 IKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWES  203 (296)
T ss_pred             eEEccccceeecccCcceeecCcCCCCceecCHHH
Confidence            899999998865433211   11223445666763

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG4645|consensus

Probab=99.46  E-value=1.6e-14  Score=103.48  Aligned_cols=90  Identities=21%  Similarity=0.413  Sum_probs=74.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+++-|||+++|+|.+.+...+         +-.|++.|+.|||..||+|||+++.|+++.   ....+|..|||.|.
T Consensus      1306 Rekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld---~~g~iK~~DFGsa~ 1382 (1509)
T KOG4645|consen 1306 REKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLD---FNGLIKYGDFGSAV 1382 (1509)
T ss_pred             HHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeee---cCCcEEeeccccee
Confidence            355678899999999999887543         678999999999999999999999999995   44579999999999


Q ss_pred             cCCCCC-----Cccceeeccceecccc
Q psy14897         77 NVPSSP-----SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-----~~~~~~~t~~~~~~~~   98 (99)
                      .+.+..     .....+||+.|.+||.
T Consensus      1383 ki~~~~~~~~~el~~~~GT~~YMAPEv 1409 (1509)
T KOG4645|consen 1383 KIKNNAQTMPGELQSMMGTPMYMAPEV 1409 (1509)
T ss_pred             EecCchhcCCHHHHhhcCCchhcCchh
Confidence            886542     1234588999999985

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.46  E-value=2.7e-13  Score=83.62  Aligned_cols=90  Identities=22%  Similarity=0.305  Sum_probs=69.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ...++++|||+.+++|.+.+...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        72 ~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~  148 (262)
T cd06613          72 RDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT---EDGDVKLADFGVS  148 (262)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC---CCCCEEECccccc
Confidence            45689999999999999887653          2789999999999999999999999999995   4556899999988


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ..+.... ......++..|.+||+
T Consensus       149 ~~~~~~~~~~~~~~~~~~y~~Pe~  172 (262)
T cd06613         149 AQLTATIAKRKSFIGTPYWMAPEV  172 (262)
T ss_pred             hhhhhhhhccccccCCccccCchh
Confidence            7654322 1122345556777764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0577|consensus

Probab=99.46  E-value=1e-14  Score=98.55  Aligned_cols=86  Identities=28%  Similarity=0.412  Sum_probs=69.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +.+.|+||||+-| +-.+.+.-+          .++.+.+.|+.|||+.+.||||++.-||++.   ....+|++|||.+
T Consensus        98 e~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs---e~g~VKLaDFGSA  173 (948)
T KOG0577|consen   98 EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS---EPGLVKLADFGSA  173 (948)
T ss_pred             cchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec---CCCeeeeccccch
Confidence            4567999999987 433333322          1678899999999999999999999999994   5677999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ....+..   +++||..+.+||.
T Consensus       174 si~~PAn---sFvGTPywMAPEV  193 (948)
T KOG0577|consen  174 SIMAPAN---SFVGTPYWMAPEV  193 (948)
T ss_pred             hhcCchh---cccCCccccchhH
Confidence            8776664   4799998888874

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.46  E-value=3.6e-13  Score=84.14  Aligned_cols=90  Identities=30%  Similarity=0.434  Sum_probs=69.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.++.+.......         .++.|++.++.|||..+++|+++++.|+++.   ....+++.|||.+.
T Consensus        72 ~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~---~~~~~kl~d~g~~~  148 (288)
T cd07833          72 KGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS---ESGVLKLCDFGFAR  148 (288)
T ss_pred             CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEEeeeccc
Confidence            35689999999987776554331         2678999999999999999999999999995   45669999999988


Q ss_pred             cCCCCC--Cccceeeccceecccc
Q psy14897         77 NVPSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      .+....  ......++.+|.+||+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~PE~  172 (288)
T cd07833         149 ALRARPASPLTDYVATRWYRAPEL  172 (288)
T ss_pred             ccCCCccccccCcccccCCcCCch
Confidence            765443  2233456777888874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.46  E-value=5e-13  Score=83.01  Aligned_cols=89  Identities=21%  Similarity=0.300  Sum_probs=68.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+.+...         .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+.
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~---~~~~~~l~d~~~~~  156 (272)
T cd06629          80 EEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD---ADGICKISDFGISK  156 (272)
T ss_pred             CCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc---CCCeEEEeeccccc
Confidence            35689999999999999887542         2678999999999999999999999999994   45679999999987


Q ss_pred             cCCCCCC---ccceeeccceeccc
Q psy14897         77 NVPSSPS---YERHVTTQTTRIGR   97 (99)
Q Consensus        77 ~~~~~~~---~~~~~~t~~~~~~~   97 (99)
                      .......   .....++..|.+||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~y~~PE  180 (272)
T cd06629         157 KSDDIYDNDQNMSMQGSVFWMAPE  180 (272)
T ss_pred             cccccccccccccccCCccccCHH
Confidence            6532211   11223455666665

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.46  E-value=3e-13  Score=84.50  Aligned_cols=89  Identities=26%  Similarity=0.403  Sum_probs=67.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++|+||+.+ ++.+.+..          ..++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        71 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~---~~~~~~l~dfg~~  146 (284)
T cd07839          71 DKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN---KNGELKLADFGLA  146 (284)
T ss_pred             CCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc---CCCcEEECccchh
Confidence            4568999999975 77666543          22789999999999999999999999999994   4566999999998


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +.+.... ......++..|.+||.
T Consensus       147 ~~~~~~~~~~~~~~~~~~y~aPE~  170 (284)
T cd07839         147 RAFGIPVRCYSAEVVTLWYRPPDV  170 (284)
T ss_pred             hccCCCCCCcCCCccccCCcChHH
Confidence            8654322 2223455677888874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0984|consensus

Probab=99.45  E-value=5.6e-14  Score=84.66  Aligned_cols=91  Identities=22%  Similarity=0.330  Sum_probs=72.1

Q ss_pred             CCCCCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhC-CeeecCcCCCcEEEeeCCCCCeEEE
Q psy14897          4 FRSTQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSR-NFIHRDIKPDNFLMGLGKRGNLVYI   69 (99)
Q Consensus         4 ~~~~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~-~i~h~~l~~~~~l~~~~~~~~~~~l   69 (99)
                      ++...+|+-||.|+. +|..+-+.             .+++-.++.++.|||++ .++|||++|.|+++   +....+|+
T Consensus       115 ~regdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI---n~~GqVKi  190 (282)
T KOG0984|consen  115 FREGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI---NYDGQVKI  190 (282)
T ss_pred             hccccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE---ccCCcEEE
Confidence            566789999998875 55554321             23678899999999975 89999999999999   57788999


Q ss_pred             eeccceecCCCCCCccceeeccceecccc
Q psy14897         70 IDFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        70 ~d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .|||.+..+.+.-..+...|.+.|.+||.
T Consensus       191 CDFGIsG~L~dSiAkt~daGCkpYmaPEr  219 (282)
T KOG0984|consen  191 CDFGISGYLVDSIAKTMDAGCKPYMAPER  219 (282)
T ss_pred             cccccceeehhhhHHHHhcCCCccCChhh
Confidence            99999998876655455677788888875

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.45  E-value=3.2e-13  Score=87.07  Aligned_cols=87  Identities=26%  Similarity=0.323  Sum_probs=67.5

Q ss_pred             CeEEEEEeeCCCCchhhhcc-------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCC
Q psy14897          8 QSCLVFPYSYGTKSGEQIST-------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS   80 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~-------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~   80 (99)
                      ..++||||+.+ +|.+.+..       ..++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.++....
T Consensus        95 ~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~---~~~~~kL~Dfg~~~~~~~  170 (353)
T cd07850          95 DVYLVMELMDA-NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLARTAGT  170 (353)
T ss_pred             cEEEEEeccCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEccCccceeCCC
Confidence            47999999975 66665532       23789999999999999999999999999994   455699999999987654


Q ss_pred             CCCccceeeccceecccc
Q psy14897         81 SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        81 ~~~~~~~~~t~~~~~~~~   98 (99)
                      ........++..|.+||.
T Consensus       171 ~~~~~~~~~~~~y~aPE~  188 (353)
T cd07850         171 SFMMTPYVVTRYYRAPEV  188 (353)
T ss_pred             CCCCCCCcccccccCHHH
Confidence            433334456777888874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG4257|consensus

Probab=99.45  E-value=1.1e-13  Score=94.16  Aligned_cols=81  Identities=22%  Similarity=0.344  Sum_probs=70.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +...|+|||...-|.|..+|+.++          ++.|++.++.|||+.+++|||+...|+++.   ...-+|++|||++
T Consensus       462 e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVs---Sp~CVKLaDFGLS  538 (974)
T KOG4257|consen  462 EQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVS---SPQCVKLADFGLS  538 (974)
T ss_pred             ccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeec---Ccceeeecccchh
Confidence            467899999999999999998765          789999999999999999999999999994   4455899999999


Q ss_pred             ecCCCCCCccceee
Q psy14897         76 KNVPSSPSYERHVT   89 (99)
Q Consensus        76 ~~~~~~~~~~~~~~   89 (99)
                      +.+.+...|....+
T Consensus       539 R~~ed~~yYkaS~~  552 (974)
T KOG4257|consen  539 RYLEDDAYYKASRG  552 (974)
T ss_pred             hhccccchhhcccc
Confidence            99988877655543

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.45  E-value=3.3e-13  Score=83.08  Aligned_cols=71  Identities=31%  Similarity=0.460  Sum_probs=60.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+.+...         .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||++.
T Consensus        65 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~---~~~~~~l~dfg~~~  141 (265)
T cd05579          65 KKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID---SNGHLKLTDFGLSK  141 (265)
T ss_pred             CcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEc---CCCCEEEEecccch
Confidence            45689999999999998887642         2789999999999999999999999999995   45568999999887


Q ss_pred             cCC
Q psy14897         77 NVP   79 (99)
Q Consensus        77 ~~~   79 (99)
                      ...
T Consensus       142 ~~~  144 (265)
T cd05579         142 VGL  144 (265)
T ss_pred             hcc
Confidence            643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG1345|consensus

Probab=99.45  E-value=2.3e-13  Score=84.87  Aligned_cols=74  Identities=24%  Similarity=0.406  Sum_probs=62.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      +-.++++||...|||.+-+...        +++.|+++++.|+|+++++|||++.+|+++... .-.++|+.|||.++..
T Consensus        95 d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~-df~rvKlcDFG~t~k~  173 (378)
T KOG1345|consen   95 DAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA-DFYRVKLCDFGLTRKV  173 (378)
T ss_pred             ceEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC-CccEEEeeeccccccc
Confidence            4567999999999999877543        488999999999999999999999999999533 3458999999998876


Q ss_pred             CCC
Q psy14897         79 PSS   81 (99)
Q Consensus        79 ~~~   81 (99)
                      ...
T Consensus       174 g~t  176 (378)
T KOG1345|consen  174 GTT  176 (378)
T ss_pred             Cce
Confidence            544

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.45  E-value=4.4e-13  Score=83.87  Aligned_cols=89  Identities=20%  Similarity=0.334  Sum_probs=67.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc------------hHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG------------KEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~------------~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      .+..++||||+.+++|.+++...            .++.|++.++.|+|+ .+++|+|+++.|+++.   ....+++.||
T Consensus        71 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~df  147 (286)
T cd06622          71 EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVN---GNGQVKLCDF  147 (286)
T ss_pred             CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEEC---CCCCEEEeec
Confidence            46789999999999998877652            267899999999997 5999999999999995   4566999999


Q ss_pred             cceecCCCCCCccceeeccceecccc
Q psy14897         73 GLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |.+..+.... .....++..|.+||.
T Consensus       148 g~~~~~~~~~-~~~~~~~~~y~aPE~  172 (286)
T cd06622         148 GVSGNLVASL-AKTNIGCQSYMAPER  172 (286)
T ss_pred             CCcccccCCc-cccCCCccCccCcch
Confidence            9987653321 122344555666653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.45  E-value=3.5e-13  Score=86.07  Aligned_cols=69  Identities=19%  Similarity=0.300  Sum_probs=56.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++||||+++|+|.+++..+           .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.+|+.
T Consensus        71 ~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~---~~~~~~l~~~~~  147 (327)
T cd08227          71 DNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVYLSGLRS  147 (327)
T ss_pred             CCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe---cCCcEEEcccch
Confidence            35689999999999998887531           2778999999999999999999999999995   445578888875


Q ss_pred             eec
Q psy14897         75 AKN   77 (99)
Q Consensus        75 a~~   77 (99)
                      ...
T Consensus       148 ~~~  150 (327)
T cd08227         148 NLS  150 (327)
T ss_pred             hhc
Confidence            443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.45  E-value=3.9e-13  Score=84.72  Aligned_cols=90  Identities=27%  Similarity=0.413  Sum_probs=69.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      .+..++|+||+.+++|.+++....        ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++..
T Consensus        88 ~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~---~~~~~kL~dfg~~~~  164 (293)
T cd06647          88 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQ  164 (293)
T ss_pred             CCcEEEEEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc---CCCCEEEccCcceec
Confidence            356899999999999998876532        678999999999999999999999999994   455689999998876


Q ss_pred             CCCCCCc-cceeeccceecccc
Q psy14897         78 VPSSPSY-ERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~~-~~~~~t~~~~~~~~   98 (99)
                      ....... ....++..|.+||.
T Consensus       165 ~~~~~~~~~~~~~~~~y~~PE~  186 (293)
T cd06647         165 ITPEQSKRSTMVGTPYWMAPEV  186 (293)
T ss_pred             ccccccccccccCChhhcCchh
Confidence            5443321 12245556666763

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.45  E-value=3.4e-13  Score=84.19  Aligned_cols=89  Identities=25%  Similarity=0.410  Sum_probs=67.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      ++..++||||+. +++.+.+..            ..++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||
T Consensus        71 ~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg  146 (285)
T cd07861          71 ESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID---NKGVIKLADFG  146 (285)
T ss_pred             CCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc---CCCcEEECccc
Confidence            467899999997 577766532            12689999999999999999999999999994   45669999999


Q ss_pred             ceecCCCCC-Cccceeeccceecccc
Q psy14897         74 LAKNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ++....... ......++..|.+||.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~y~aPE~  172 (285)
T cd07861         147 LARAFGIPVRVYTHEVVTLWYRAPEV  172 (285)
T ss_pred             ceeecCCCcccccCCcccccccChHH
Confidence            987653322 1122345666777763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.45  E-value=5e-13  Score=83.12  Aligned_cols=88  Identities=16%  Similarity=0.169  Sum_probs=66.2

Q ss_pred             CCeEEEEEeeCCCCchhhhccch------------------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEE
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK------------------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVY   68 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~------------------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~   68 (99)
                      +..++||||+.+|+|.+++....                  ++.|++.++.|+|+++++|+|+++.|+++.   ....++
T Consensus        81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~---~~~~~~  157 (275)
T cd05046          81 EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVS---SQREVK  157 (275)
T ss_pred             CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEe---CCCcEE
Confidence            56899999999999998875311                  678999999999999999999999999995   445688


Q ss_pred             EeeccceecCCCCC--Cccceeeccceeccc
Q psy14897         69 IIDFGLAKNVPSSP--SYERHVTTQTTRIGR   97 (99)
Q Consensus        69 l~d~g~a~~~~~~~--~~~~~~~t~~~~~~~   97 (99)
                      +.++|++.......  ......++..|.+||
T Consensus       158 l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE  188 (275)
T cd05046         158 VSLLSLSKDVYNSEYYKLRNALIPLRWLAPE  188 (275)
T ss_pred             EcccccccccCcccccccCCceeEEeecChh
Confidence            99999886543221  112223444566665

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.45  E-value=3.5e-13  Score=83.84  Aligned_cols=90  Identities=26%  Similarity=0.378  Sum_probs=71.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +...++|+||+.+++|.+.+....        ++.|++.++.++|+.+++|+++++.|+++.   ....+++.|||.+..
T Consensus        71 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~  147 (274)
T cd06609          71 GSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLS---EEGDVKLADFGVSGQ  147 (274)
T ss_pred             CCeEEEEEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEccccccee
Confidence            356899999999999999887532        779999999999999999999999999995   455689999999887


Q ss_pred             CCCCC-Cccceeeccceecccc
Q psy14897         78 VPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +.... ......++..|.+||.
T Consensus       148 ~~~~~~~~~~~~~~~~y~~PE~  169 (274)
T cd06609         148 LTSTMSKRNTFVGTPFWMAPEV  169 (274)
T ss_pred             ecccccccccccCCccccChhh
Confidence            65432 2223355666777774

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG0665|consensus

Probab=99.45  E-value=3.3e-14  Score=89.78  Aligned_cols=87  Identities=25%  Similarity=0.314  Sum_probs=69.8

Q ss_pred             CeEEEEEeeCCCCchhhhc-------cchHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCC
Q psy14897          8 QSCLVFPYSYGTKSGEQIS-------TGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS   80 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~-------~~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~   80 (99)
                      +.|+|||||.. +|-..+.       -+.+..|++.|++++|+.+|+|||++|+|+++   ......|+.|||+|+.-..
T Consensus        95 e~y~v~e~m~~-nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv---~~~~~lKi~dfg~ar~e~~  170 (369)
T KOG0665|consen   95 EVYLVMELMDA-NLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV---NSDCTLKILDFGLARTEDT  170 (369)
T ss_pred             hHHHHHHhhhh-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee---cchhheeeccchhhcccCc
Confidence            57899999986 5544432       13378999999999999999999999999999   4667799999999987655


Q ss_pred             CCCccceeeccceecccc
Q psy14897         81 SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        81 ~~~~~~~~~t~~~~~~~~   98 (99)
                      .-..+.-++|.-|++||+
T Consensus       171 ~~~mtpyVvtRyyrapev  188 (369)
T KOG0665|consen  171 DFMMTPYVVTRYYRAPEV  188 (369)
T ss_pred             ccccCchhheeeccCchh
Confidence            534466688899999985

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.45  E-value=3.7e-13  Score=83.48  Aligned_cols=90  Identities=26%  Similarity=0.415  Sum_probs=69.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIID   71 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~l~d   71 (99)
                      ++..++||||+.+++|.+.+..             ..++.|++.++.++|+ .+++|+|+++.|+++.   ....+++.|
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~---~~~~~~l~d  157 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLG---EDDKVTITD  157 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEEC---CCCcEEEec
Confidence            4678999999999999887632             1267899999999996 6899999999999994   456689999


Q ss_pred             ccceecCCCCCCccceeeccceecccc
Q psy14897         72 FGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        72 ~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ||.+.............++..|.+||.
T Consensus       158 fg~~~~~~~~~~~~~~~~~~~~~~Pe~  184 (269)
T cd08528         158 FGLAKQKQPESKLTSVVGTILYSCPEI  184 (269)
T ss_pred             ccceeecccccccccccCcccCcChhh
Confidence            999987655433334455666777764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.45  E-value=6.6e-13  Score=82.11  Aligned_cols=71  Identities=25%  Similarity=0.422  Sum_probs=60.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.+++|.+++...           .++.|++.++.++|+++++|+|+++.|+++.   ....+++.|||+
T Consensus        73 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~  149 (261)
T cd05068          73 EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG---ENNICKVADFGL  149 (261)
T ss_pred             CCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc---CCCCEEECCcce
Confidence            35689999999999999887542           2678999999999999999999999999995   445689999999


Q ss_pred             eecCC
Q psy14897         75 AKNVP   79 (99)
Q Consensus        75 a~~~~   79 (99)
                      +..+.
T Consensus       150 ~~~~~  154 (261)
T cd05068         150 ARVIK  154 (261)
T ss_pred             EEEcc
Confidence            98765

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.44  E-value=3.3e-13  Score=83.57  Aligned_cols=90  Identities=18%  Similarity=0.304  Sum_probs=68.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+.+...         .++.|++.++.|+|+.+++|+++++.|+++.   ....+++.|||.+.
T Consensus        74 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~  150 (265)
T cd06631          74 DNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM---PNGIIKLIDFGCAR  150 (265)
T ss_pred             CCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEEC---CCCeEEeccchhhH
Confidence            35689999999999999988642         2678999999999999999999999999994   45669999999887


Q ss_pred             cCCCCC-------Cccceeeccceecccc
Q psy14897         77 NVPSSP-------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-------~~~~~~~t~~~~~~~~   98 (99)
                      ......       ......++..|.+||.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~pe~  179 (265)
T cd06631         151 RLAWVGLHGTHSNMLKSMHGTPYWMAPEV  179 (265)
T ss_pred             hhhhccccccccccccccCCCccccChhh
Confidence            642211       1112345566677764

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.44  E-value=3.9e-13  Score=83.33  Aligned_cols=89  Identities=22%  Similarity=0.322  Sum_probs=68.2

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ...++||||+.+++|.+.+...         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++.
T Consensus        79 ~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~  155 (264)
T cd06653          79 KKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKR  155 (264)
T ss_pred             CEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECccccccc
Confidence            4578999999999998877542         2778999999999999999999999999994   445689999999886


Q ss_pred             CCCC----CCccceeeccceecccc
Q psy14897         78 VPSS----PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~----~~~~~~~~t~~~~~~~~   98 (99)
                      +...    .......++..|.+||+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~  180 (264)
T cd06653         156 IQTICMSGTGIKSVTGTPYWMSPEV  180 (264)
T ss_pred             cccccccCccccccCCcccccCHhh
Confidence            5321    11122345666777764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.44  E-value=6.6e-13  Score=82.15  Aligned_cols=71  Identities=21%  Similarity=0.382  Sum_probs=60.8

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ...+++|||+.+++|.+++...           .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+
T Consensus        73 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~  149 (260)
T cd05073          73 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCKIADFGLA  149 (260)
T ss_pred             CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCCcce
Confidence            5679999999999999888542           1678999999999999999999999999994   5567999999998


Q ss_pred             ecCCC
Q psy14897         76 KNVPS   80 (99)
Q Consensus        76 ~~~~~   80 (99)
                      ..+..
T Consensus       150 ~~~~~  154 (260)
T cd05073         150 RVIED  154 (260)
T ss_pred             eeccC
Confidence            76643

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.44  E-value=3.1e-13  Score=83.70  Aligned_cols=89  Identities=25%  Similarity=0.332  Sum_probs=68.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      ...++||||+.+++|.+.+...             .++.|++.++.|+|+.+++|+++++.|+++.   ....+++.|||
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~---~~~~~~l~d~~  158 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT---KNAEVKLVDFG  158 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc---cCCeEEECCCc
Confidence            4579999999999998876531             1778999999999999999999999999995   45669999999


Q ss_pred             ceecCCCCC-Cccceeeccceecccc
Q psy14897         74 LAKNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      .+....... ......++..|.+||+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~y~aPE~  184 (275)
T cd06608         159 VSAQLDSTLGRRNTFIGTPYWMAPEV  184 (275)
T ss_pred             cceecccchhhhcCccccccccCHhH
Confidence            887654322 1122345666666663

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.44  E-value=4.8e-13  Score=82.48  Aligned_cols=90  Identities=29%  Similarity=0.434  Sum_probs=71.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc---------chHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST---------GKEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~---------~~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ....++||||+.+++|.+.+..         ..++.|++.++.|+|+ .+++|+++++.|+++.   ....+++.|||.+
T Consensus        71 ~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~---~~~~~~l~df~~~  147 (264)
T cd06623          71 EGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN---SKGEVKIADFGIS  147 (264)
T ss_pred             CCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEEC---CCCCEEEccCccc
Confidence            3578999999999999998864         2378999999999999 9999999999999994   4566899999998


Q ss_pred             ecCCCCCCcc-ceeeccceecccc
Q psy14897         76 KNVPSSPSYE-RHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~-~~~~t~~~~~~~~   98 (99)
                      ..+....... ...++..|.+||.
T Consensus       148 ~~~~~~~~~~~~~~~~~~y~~pE~  171 (264)
T cd06623         148 KVLENTLDQCNTFVGTVTYMSPER  171 (264)
T ss_pred             eecccCCCcccceeecccccCHhh
Confidence            8765443322 3455666777763

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.44  E-value=5.9e-13  Score=81.83  Aligned_cols=90  Identities=20%  Similarity=0.297  Sum_probs=70.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +...++++||+.+++|.+.+...          .++.|++.++.|+|..+++|+++++.|+++.   ....+++.|||++
T Consensus        70 ~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~---~~~~~~l~dfg~~  146 (256)
T cd06612          70 NTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN---EEGQAKLADFGVS  146 (256)
T ss_pred             CCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC---CCCcEEEcccccc
Confidence            35689999999999999887531          2789999999999999999999999999994   4556899999998


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ..+.... ......++..|.+||+
T Consensus       147 ~~~~~~~~~~~~~~~~~~y~~PE~  170 (256)
T cd06612         147 GQLTDTMAKRNTVIGTPFWMAPEV  170 (256)
T ss_pred             hhcccCccccccccCCccccCHHH
Confidence            8765443 1222345666777763

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.44  E-value=6.3e-13  Score=83.71  Aligned_cols=71  Identities=27%  Similarity=0.488  Sum_probs=60.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGN   65 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~   65 (99)
                      ++..++||||+.+|+|.+++...                    .++.|++.++.|+|+++++|+|++|.|+++.   ...
T Consensus        91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~---~~~  167 (296)
T cd05095          91 SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVG---KNY  167 (296)
T ss_pred             CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEc---CCC
Confidence            35689999999999999887532                    2678999999999999999999999999995   455


Q ss_pred             eEEEeeccceecCC
Q psy14897         66 LVYIIDFGLAKNVP   79 (99)
Q Consensus        66 ~~~l~d~g~a~~~~   79 (99)
                      .+++.|||.++.+.
T Consensus       168 ~~~l~dfg~~~~~~  181 (296)
T cd05095         168 TIKIADFGMSRNLY  181 (296)
T ss_pred             CEEeccCccccccc
Confidence            68999999988654

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.44  E-value=1.5e-13  Score=96.66  Aligned_cols=92  Identities=8%  Similarity=0.038  Sum_probs=65.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC--------------
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG--------------   61 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~--------------   61 (99)
                      +..++.+|||+ +++|.+++...          .++.|++.|+.|||+++|+|||+||+|+++...              
T Consensus        52 ~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~  130 (793)
T PLN00181         52 DDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS  130 (793)
T ss_pred             cchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcc
Confidence            34677888987 45999988532          278999999999999999999999999998410              


Q ss_pred             --CCCCeEEEeeccceecCCCC-----------------CCccceeeccceecccc
Q psy14897         62 --KRGNLVYIIDFGLAKNVPSS-----------------PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        62 --~~~~~~~l~d~g~a~~~~~~-----------------~~~~~~~~t~~~~~~~~   98 (99)
                        .....+++.|||+++.....                 ......++|.+|.+||+
T Consensus       131 ~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~  186 (793)
T PLN00181        131 GSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE  186 (793)
T ss_pred             cccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence              12234677888877643110                 00112357888999985

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.44  E-value=5.7e-13  Score=83.14  Aligned_cols=90  Identities=28%  Similarity=0.394  Sum_probs=70.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +...++||||+.+++|.+.+....        ++.|++.++.++|+.+++|+|+++.|+++.   ....+++.|||++..
T Consensus        74 ~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~---~~~~~~l~dfg~~~~  150 (277)
T cd06641          74 DTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQ  150 (277)
T ss_pred             CCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC---CCCCEEEeeccccee
Confidence            456899999999999998876432        678999999999999999999999999994   455689999999876


Q ss_pred             CCCCCC-ccceeeccceecccc
Q psy14897         78 VPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      +..... .....++..|.+||+
T Consensus       151 ~~~~~~~~~~~~~~~~y~~PE~  172 (277)
T cd06641         151 LTDTQIKRNTFVGTPFWMAPEV  172 (277)
T ss_pred             cccchhhhccccCCccccChhh
Confidence            644321 122345666777764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG0574|consensus

Probab=99.44  E-value=3.1e-14  Score=90.06  Aligned_cols=92  Identities=21%  Similarity=0.361  Sum_probs=75.6

Q ss_pred             CCCCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          4 FRSTQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         4 ~~~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      |.+..+|+||||+..|++.+.++.+.          +.+..+.|+.|||...-+|||++.-|+++   ......|++|||
T Consensus        98 FK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL---NT~G~AKLADFG  174 (502)
T KOG0574|consen   98 FKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL---NTDGIAKLADFG  174 (502)
T ss_pred             ccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE---cccchhhhhhcc
Confidence            45678999999999999999987543          56778899999999999999999999999   567778999999


Q ss_pred             ceecCCCCC-Cccceeeccceecccc
Q psy14897         74 LAKNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      .+..+.+.- +.....||..+.+||.
T Consensus       175 VAGQLTDTMAKRNTVIGTPFWMAPEV  200 (502)
T KOG0574|consen  175 VAGQLTDTMAKRNTVIGTPFWMAPEV  200 (502)
T ss_pred             ccchhhhhHHhhCccccCcccccHHH
Confidence            998775542 3455678887777763

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.43  E-value=5.9e-13  Score=82.18  Aligned_cols=90  Identities=21%  Similarity=0.402  Sum_probs=69.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++|+||+.+++|.+.+....         ++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+.
T Consensus        71 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~---~~~~~kl~d~g~~~  147 (264)
T cd06626          71 REKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD---HNGVIKLGDFGCAV  147 (264)
T ss_pred             CCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccccccc
Confidence            457899999999999999876532         678999999999999999999999999995   45669999999988


Q ss_pred             cCCCCCCcc-----ceeeccceecccc
Q psy14897         77 NVPSSPSYE-----RHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~-----~~~~t~~~~~~~~   98 (99)
                      .........     ...++..|.+||.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~PE~  174 (264)
T cd06626         148 KLKNNTTTMGEEVQSLAGTPAYMAPEV  174 (264)
T ss_pred             ccCCCCCcccccccCCcCCcCccChhh
Confidence            764432211     1234555666663

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.43  E-value=4.2e-13  Score=83.85  Aligned_cols=89  Identities=17%  Similarity=0.218  Sum_probs=66.5

Q ss_pred             CCeEEEEEeeCCCCchhhhcc-------------------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST-------------------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG   61 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~-------------------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~   61 (99)
                      ...++++||+.+++|.+++..                         ..++.|++.++.|+|+++++|+|++|.|+++.  
T Consensus        81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~--  158 (283)
T cd05091          81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF--  158 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec--
Confidence            568899999999999888731                         12678999999999999999999999999984  


Q ss_pred             CCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         62 KRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        62 ~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                       ....+++.|||+++.+......   ....++..|.+||.
T Consensus       159 -~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  197 (283)
T cd05091         159 -DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEA  197 (283)
T ss_pred             -CCCceEecccccccccccchheeeccCccCCccccCHHH
Confidence             4455899999998866433211   11122445666663

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.43  E-value=6e-13  Score=83.56  Aligned_cols=88  Identities=24%  Similarity=0.340  Sum_probs=68.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +..++||||+.+ +|.+.+...          .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||.+.
T Consensus        79 ~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~---~~~~~~l~d~g~~~  154 (293)
T cd07843          79 DKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN---NRGILKICDFGLAR  154 (293)
T ss_pred             CcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CCCcEEEeecCcee
Confidence            679999999985 777766431          2789999999999999999999999999994   45669999999988


Q ss_pred             cCCCC-CCccceeeccceecccc
Q psy14897         77 NVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      .+... .......++..|.+||+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~aPE~  177 (293)
T cd07843         155 EYGSPLKPYTQLVVTLWYRAPEL  177 (293)
T ss_pred             eccCCccccccccccccccCchh
Confidence            76543 22233445666777764

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.43  E-value=4.5e-13  Score=84.74  Aligned_cols=71  Identities=24%  Similarity=0.251  Sum_probs=59.9

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++++||+.+|+|.+.+..+          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.++
T Consensus        81 ~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~---~~~~~kL~Dfg~~~  157 (303)
T cd05110          81 PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK---SPNHVKITDFGLAR  157 (303)
T ss_pred             CCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeec---CCCceEEccccccc
Confidence            3467899999999999887542          2678999999999999999999999999994   44568999999998


Q ss_pred             cCCC
Q psy14897         77 NVPS   80 (99)
Q Consensus        77 ~~~~   80 (99)
                      .+..
T Consensus       158 ~~~~  161 (303)
T cd05110         158 LLEG  161 (303)
T ss_pred             cccC
Confidence            7643

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.43  E-value=5e-13  Score=83.81  Aligned_cols=89  Identities=26%  Similarity=0.386  Sum_probs=65.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+ +|.+.+...          .++.|++.++.|+|+.+++|+|+++.|+++.   ....++++|||.+
T Consensus        75 ~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~  150 (291)
T cd07844          75 KKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS---ERGELKLADFGLA  150 (291)
T ss_pred             CCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEc---CCCCEEECccccc
Confidence            3568999999985 888776432          2678999999999999999999999999994   4456999999988


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +...... ......++..|.+||.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~aPE~  174 (291)
T cd07844         151 RAKSVPSKTYSNEVVTLWYRPPDV  174 (291)
T ss_pred             cccCCCCccccccccccccCCcHH
Confidence            7543211 1122234555666663

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.43  E-value=6.8e-13  Score=82.97  Aligned_cols=89  Identities=24%  Similarity=0.359  Sum_probs=66.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG   61 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~   61 (99)
                      .+..++||||+.+|+|.+++...                        .++.|++.++.|+|+.+++|+|+++.|+++.  
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~--  156 (280)
T cd05092          79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG--  156 (280)
T ss_pred             CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc--
Confidence            35689999999999998877431                        2678999999999999999999999999995  


Q ss_pred             CCCCeEEEeeccceecCCCCCCc---cceeeccceeccc
Q psy14897         62 KRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGR   97 (99)
Q Consensus        62 ~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~   97 (99)
                       ....+++.|||++........+   ....++..|.+||
T Consensus       157 -~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  194 (280)
T cd05092         157 -QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE  194 (280)
T ss_pred             -CCCCEEECCCCceeEcCCCceeecCCCccccccccCHH
Confidence             4566899999998765432211   1112234566666

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.43  E-value=8.8e-13  Score=81.01  Aligned_cols=71  Identities=24%  Similarity=0.411  Sum_probs=60.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ....++||||+.+++|.+++...          .++.+++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        64 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~---~~~~~~l~d~g~~  140 (251)
T cd05041          64 KQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMS  140 (251)
T ss_pred             CCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEc---CCCcEEEeecccc
Confidence            45689999999999998887432          2667899999999999999999999999994   4566999999998


Q ss_pred             ecCC
Q psy14897         76 KNVP   79 (99)
Q Consensus        76 ~~~~   79 (99)
                      ....
T Consensus       141 ~~~~  144 (251)
T cd05041         141 REEE  144 (251)
T ss_pred             cccc
Confidence            7653

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.43  E-value=5e-13  Score=84.34  Aligned_cols=89  Identities=27%  Similarity=0.397  Sum_probs=67.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+ +|.+.+...          .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+
T Consensus        76 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~  151 (301)
T cd07873          76 EKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLIN---ERGELKLADFGLA  151 (301)
T ss_pred             CCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEEC---CCCcEEECcCcch
Confidence            3568999999974 787766432          2678999999999999999999999999994   4556999999998


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ....... ......++..|.+||.
T Consensus       152 ~~~~~~~~~~~~~~~~~~y~~PE~  175 (301)
T cd07873         152 RAKSIPTKTYSNEVVTLWYRPPDI  175 (301)
T ss_pred             hccCCCCCcccccceeecccCcHH
Confidence            7643222 1222345667777764

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.43  E-value=1.2e-12  Score=80.28  Aligned_cols=90  Identities=27%  Similarity=0.395  Sum_probs=70.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +...++||||+.+++|.+.+....         ++.|++.++.++|+.+++|+++++.|+++.   ....+++.|||.+.
T Consensus        65 ~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~---~~~~~~l~d~~~~~  141 (250)
T cd05123          65 EEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD---ADGHIKLTDFGLAK  141 (250)
T ss_pred             CCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc---CCCcEEEeecCcce
Confidence            456899999999999998886432         678999999999999999999999999995   44568999999887


Q ss_pred             cCCCCC-Cccceeeccceecccc
Q psy14897         77 NVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ...... ......++..|.+||.
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~Pe~  164 (250)
T cd05123         142 ELSSEGSRTNTFCGTPEYLAPEV  164 (250)
T ss_pred             ecccCCCcccCCcCCccccChHH
Confidence            664431 2223345666777763

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.43  E-value=8.9e-13  Score=81.81  Aligned_cols=71  Identities=27%  Similarity=0.496  Sum_probs=59.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-h----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-K----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.+|+|.+++... .          ++.|++.|+.|||+++++|+++.+.|+++.   ....+|+.+||+
T Consensus        73 ~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~---~~~~~Kl~~f~~  149 (259)
T PF07714_consen   73 NEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD---SNGQVKLSDFGL  149 (259)
T ss_dssp             SSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE---TTTEEEEESTTT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccc
Confidence            35689999999999999988765 1          789999999999999999999999999995   456799999999


Q ss_pred             eecCC
Q psy14897         75 AKNVP   79 (99)
Q Consensus        75 a~~~~   79 (99)
                      +....
T Consensus       150 ~~~~~  154 (259)
T PF07714_consen  150 SRPIS  154 (259)
T ss_dssp             GEETT
T ss_pred             ccccc
Confidence            98773

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.43  E-value=8.7e-13  Score=82.78  Aligned_cols=89  Identities=26%  Similarity=0.390  Sum_probs=65.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+. +++.+.+..          ..++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+
T Consensus        75 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~  150 (291)
T cd07870          75 KETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS---YLGELKLADFGLA  150 (291)
T ss_pred             CCeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc---CCCcEEEeccccc
Confidence            356899999996 576665532          12678999999999999999999999999994   4556999999988


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +...... ......++..|.+||.
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~aPE~  174 (291)
T cd07870         151 RAKSIPSQTYSSEVVTLWYRPPDV  174 (291)
T ss_pred             cccCCCCCCCCCccccccccCCce
Confidence            7543221 1223345667777774

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.43  E-value=4.3e-13  Score=85.87  Aligned_cols=88  Identities=30%  Similarity=0.406  Sum_probs=68.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ...++||||+. |+|.+.+...         .++.|++.++.|||+++++|+++++.|+++.   ....++++|||.+..
T Consensus        81 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~dfg~~~~  156 (334)
T cd07855          81 KDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN---EDCELRIGDFGMARG  156 (334)
T ss_pred             ceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEeccccccee
Confidence            46899999996 5888777532         2778999999999999999999999999994   556699999999877


Q ss_pred             CCCCCCc-----cceeeccceecccc
Q psy14897         78 VPSSPSY-----ERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~~-----~~~~~t~~~~~~~~   98 (99)
                      .......     ....++.+|.+||.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~PE~  182 (334)
T cd07855         157 LSSSPTEHKYFMTEYVATRWYRAPEL  182 (334)
T ss_pred             ecccCcCCCcccccccccccccChHH
Confidence            6432211     22356777888874

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0587|consensus

Probab=99.43  E-value=6.6e-13  Score=92.35  Aligned_cols=91  Identities=24%  Similarity=0.346  Sum_probs=73.0

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccch-----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTGK-----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~~-----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      .++++|+||||+.+|+.-+..+.-+           +++.++.|+.+||.+.++|||++-.|+++.   ....+|+.|||
T Consensus        92 ~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT---~e~~VKLvDFG  168 (953)
T KOG0587|consen   92 NGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLT---ENAEVKLVDFG  168 (953)
T ss_pred             CCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEe---ccCcEEEeeee
Confidence            4689999999999999888775321           568899999999999999999999999995   55669999999


Q ss_pred             ceecCCCC-CCccceeeccceecccc
Q psy14897         74 LAKNVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      .+..+... ....+.+||..+.+||.
T Consensus       169 vSaQldsT~grRnT~iGtP~WMAPEV  194 (953)
T KOG0587|consen  169 VSAQLDSTVGRRNTFIGTPYWMAPEV  194 (953)
T ss_pred             eeeeeecccccccCcCCCccccccee
Confidence            98776432 33455677877777763

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.43  E-value=1.3e-12  Score=82.10  Aligned_cols=89  Identities=28%  Similarity=0.433  Sum_probs=65.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ....++||||+.+ ++.+.+...           .++.|++.++.|+|+++++|+++++.|+++.  ..+..+++.|||.
T Consensus        73 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~--~~~~~~kl~dfg~  149 (294)
T PLN00009         73 EKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLID--RRTNALKLADFGL  149 (294)
T ss_pred             CCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEE--CCCCEEEEccccc
Confidence            3578999999964 776665321           2678999999999999999999999999995  3345689999999


Q ss_pred             eecCCCCC-Cccceeeccceeccc
Q psy14897         75 AKNVPSSP-SYERHVTTQTTRIGR   97 (99)
Q Consensus        75 a~~~~~~~-~~~~~~~t~~~~~~~   97 (99)
                      +....... ......++..|.+||
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~~PE  173 (294)
T PLN00009        150 ARAFGIPVRTFTHEVVTLWYRAPE  173 (294)
T ss_pred             ccccCCCccccccCceeecccCHH
Confidence            87653321 122234556677776

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.42  E-value=7.5e-13  Score=83.04  Aligned_cols=88  Identities=28%  Similarity=0.422  Sum_probs=66.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      .+.+++||||+.+++|.+.+..             ..++.|++.++.|+|+.+++|+++++.|+++.   ....+++.||
T Consensus        73 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~---~~~~~~l~df  149 (287)
T cd06621          73 SSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT---RKGQVKLCDF  149 (287)
T ss_pred             CCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe---cCCeEEEeec
Confidence            3468999999999999876532             12789999999999999999999999999995   4456999999


Q ss_pred             cceecCCCCCCccceeeccceeccc
Q psy14897         73 GLAKNVPSSPSYERHVTTQTTRIGR   97 (99)
Q Consensus        73 g~a~~~~~~~~~~~~~~t~~~~~~~   97 (99)
                      |++........ ....++..|.+||
T Consensus       150 g~~~~~~~~~~-~~~~~~~~y~~pE  173 (287)
T cd06621         150 GVSGELVNSLA-GTFTGTSFYMAPE  173 (287)
T ss_pred             ccccccccccc-ccccCCccccCHH
Confidence            99876543221 1234455566665

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.42  E-value=6.7e-13  Score=82.20  Aligned_cols=89  Identities=22%  Similarity=0.259  Sum_probs=68.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      ++..+++|||+.+++|.+.++.             ..++.|++.++.|+|+++++|+|+++.|+++.   ....+++.||
T Consensus        74 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~df  150 (267)
T cd08229          74 DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDL  150 (267)
T ss_pred             CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEECcc
Confidence            4578999999999999887752             12678999999999999999999999999995   4456999999


Q ss_pred             cceecCCCCCC-ccceeeccceeccc
Q psy14897         73 GLAKNVPSSPS-YERHVTTQTTRIGR   97 (99)
Q Consensus        73 g~a~~~~~~~~-~~~~~~t~~~~~~~   97 (99)
                      |.+..+..... .....++..|.+||
T Consensus       151 g~~~~~~~~~~~~~~~~~~~~~~ape  176 (267)
T cd08229         151 GLGRFFSSKTTAAHSLVGTPYYMSPE  176 (267)
T ss_pred             hhhhccccCCcccccccCCcCccCHH
Confidence            98876543322 12234556666665

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.42  E-value=7.5e-13  Score=81.83  Aligned_cols=71  Identities=23%  Similarity=0.372  Sum_probs=60.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.+++|.+.+...           .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.
T Consensus        72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~  148 (260)
T cd05067          72 QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS---ETLCCKIADFGL  148 (260)
T ss_pred             cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc---CCCCEEEccCcc
Confidence            45689999999999999887531           2678999999999999999999999999995   455689999999


Q ss_pred             eecCC
Q psy14897         75 AKNVP   79 (99)
Q Consensus        75 a~~~~   79 (99)
                      +....
T Consensus       149 ~~~~~  153 (260)
T cd05067         149 ARLIE  153 (260)
T ss_pred             eeecC
Confidence            87765

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.42  E-value=7e-13  Score=79.45  Aligned_cols=67  Identities=16%  Similarity=0.215  Sum_probs=53.8

Q ss_pred             eEEEEEeeCCCCchhh-hcc--------chHHHHHHHHHHHH-hhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          9 SCLVFPYSYGTKSGEQ-IST--------GKEDREWIGRIDYI-HSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~-l~~--------~~~~~~i~~~l~~l-h~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      .++||||+.++++... +..        ..++.|++.++.++ |+.+++|+|++|.|+++.    ...+++.|||+|...
T Consensus        92 ~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~----~~~v~LiDFG~a~~~  167 (190)
T cd05147          92 HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH----DGKLYIIDVSQSVEH  167 (190)
T ss_pred             CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE----CCcEEEEEccccccC
Confidence            4899999999776543 222        22678999999999 699999999999999994    245899999998765


Q ss_pred             C
Q psy14897         79 P   79 (99)
Q Consensus        79 ~   79 (99)
                      .
T Consensus       168 ~  168 (190)
T cd05147         168 D  168 (190)
T ss_pred             C
Confidence            3

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.42  E-value=7.8e-13  Score=83.00  Aligned_cols=90  Identities=20%  Similarity=0.305  Sum_probs=70.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      .+..++|+||+.+++|.+.+...        .++.|++.++.++|+++++|+++++.|+++.   ....+++.|||.+..
T Consensus        88 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~d~g~~~~  164 (285)
T cd06648          88 GDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLT---SDGRVKLSDFGFCAQ  164 (285)
T ss_pred             CCeEEEEEeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEc---CCCcEEEcccccchh
Confidence            46789999999999999887543        2789999999999999999999999999994   456689999998776


Q ss_pred             CCCCC-Cccceeeccceecccc
Q psy14897         78 VPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ..... ......++..|.+||.
T Consensus       165 ~~~~~~~~~~~~~~~~y~aPE~  186 (285)
T cd06648         165 VSKEVPRRKSLVGTPYWMAPEV  186 (285)
T ss_pred             hccCCcccccccCCccccCHHH
Confidence            54322 1122346667777764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.42  E-value=7e-13  Score=83.64  Aligned_cols=90  Identities=20%  Similarity=0.296  Sum_probs=69.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ++..++||||+.+++|.+.+....        ++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+..
T Consensus        89 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~---~~~~~~l~dfg~~~~  165 (292)
T cd06657          89 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQ  165 (292)
T ss_pred             CCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEccccccee
Confidence            467899999999999988775432        789999999999999999999999999995   445689999998876


Q ss_pred             CCCCCC-ccceeeccceecccc
Q psy14897         78 VPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      +..... .....++..|.+||.
T Consensus       166 ~~~~~~~~~~~~~~~~y~~pE~  187 (292)
T cd06657         166 VSKEVPRRKSLVGTPYWMAPEL  187 (292)
T ss_pred             cccccccccccccCccccCHHH
Confidence            543321 122345666777763

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.42  E-value=5e-13  Score=82.28  Aligned_cols=89  Identities=25%  Similarity=0.283  Sum_probs=70.3

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-------------hHHHHHHHHHHHHh-----hCCeeecCcCCCcEEEeeCCCCCeEE
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-------------KEDREWIGRIDYIH-----SRNFIHRDIKPDNFLMGLGKRGNLVY   68 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-------------~~~~~i~~~l~~lh-----~~~i~h~~l~~~~~l~~~~~~~~~~~   68 (99)
                      ...+++|||+.+++|.+.+...             .++.|++.++.++|     +.+++|+|+++.|+++.   ....++
T Consensus        74 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~---~~~~~k  150 (265)
T cd08217          74 QTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD---ANNNVK  150 (265)
T ss_pred             CEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe---cCCCEE
Confidence            4579999999999999887542             26789999999999     89999999999999995   456799


Q ss_pred             EeeccceecCCCCCC-ccceeeccceecccc
Q psy14897         69 IIDFGLAKNVPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        69 l~d~g~a~~~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      +.|||.+..+..... .....++..|.+||.
T Consensus       151 l~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~  181 (265)
T cd08217         151 LGDFGLAKILGHDSSFAKTYVGTPYYMSPEQ  181 (265)
T ss_pred             EecccccccccCCcccccccccCCCccChhh
Confidence            999999887654432 223356667777764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.42  E-value=8.8e-13  Score=82.38  Aligned_cols=90  Identities=30%  Similarity=0.448  Sum_probs=69.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc---------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST---------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~---------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.++.+.+....         ..++.|++.++.|+|+.+++|+++++.|+++.   ....+++.|||++.
T Consensus        72 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~---~~~~~~l~dfg~~~  148 (286)
T cd07846          72 KKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFAR  148 (286)
T ss_pred             CCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCcEEEEeeeeee
Confidence            4568999999999888776542         22678999999999999999999999999994   45568999999988


Q ss_pred             cCCCCC-Cccceeeccceecccc
Q psy14897         77 NVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      .+.... ......++..|.+||+
T Consensus       149 ~~~~~~~~~~~~~~~~~y~aPE~  171 (286)
T cd07846         149 TLAAPGEVYTDYVATRWYRAPEL  171 (286)
T ss_pred             eccCCccccCcccceeeccCcHH
Confidence            754332 2222345667777774

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.42  E-value=9e-13  Score=81.21  Aligned_cols=71  Identities=24%  Similarity=0.376  Sum_probs=61.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccch-----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK-----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~-----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ...++||||+.+|+|.+.+..+.           ++.|++.++.|+|+++++|+++++.|+++.   ....+++.|||.+
T Consensus        68 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~---~~~~~kl~dfg~~  144 (257)
T cd05040          68 HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA---SDDKVKIGDFGLM  144 (257)
T ss_pred             CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe---cCCEEEecccccc
Confidence            56899999999999998875421           668999999999999999999999999995   4467999999998


Q ss_pred             ecCCC
Q psy14897         76 KNVPS   80 (99)
Q Consensus        76 ~~~~~   80 (99)
                      ..+..
T Consensus       145 ~~~~~  149 (257)
T cd05040         145 RALPQ  149 (257)
T ss_pred             ccccc
Confidence            87644

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.42  E-value=1.2e-12  Score=78.26  Aligned_cols=69  Identities=17%  Similarity=0.246  Sum_probs=55.5

Q ss_pred             eEEEEEeeCCCCchhh-hcc--------chHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          9 SCLVFPYSYGTKSGEQ-IST--------GKEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~-l~~--------~~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      .++||||+.++++... +..        ..++.|++.++.++|+ .+++|+|++|.|+++.    ...+++.|||++..+
T Consensus        92 ~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~----~~~~~liDFG~a~~~  167 (190)
T cd05145          92 NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH----DGKPYIIDVSQAVEL  167 (190)
T ss_pred             CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE----CCCEEEEEcccceec
Confidence            4899999998754332 221        2378999999999999 9999999999999994    355899999999877


Q ss_pred             CCC
Q psy14897         79 PSS   81 (99)
Q Consensus        79 ~~~   81 (99)
                      ...
T Consensus       168 ~~~  170 (190)
T cd05145         168 DHP  170 (190)
T ss_pred             CCC
Confidence            543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.42  E-value=9.3e-13  Score=83.39  Aligned_cols=88  Identities=24%  Similarity=0.317  Sum_probs=67.8

Q ss_pred             CCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +..++||||+.+ +|.+.+..          ..++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+.
T Consensus        81 ~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~kL~dfg~~~  156 (309)
T cd07845          81 DSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT---DKGCLKIADFGLAR  156 (309)
T ss_pred             CeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECccceee
Confidence            458999999975 67666543          22789999999999999999999999999994   55669999999998


Q ss_pred             cCCCC-CCccceeeccceecccc
Q psy14897         77 NVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      .+... .......++..|.+||.
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~  179 (309)
T cd07845         157 TYGLPAKPMTPKVVTLWYRAPEL  179 (309)
T ss_pred             ecCCccCCCCcccccccccChhh
Confidence            76543 22233345667788874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.41  E-value=1.4e-12  Score=80.14  Aligned_cols=88  Identities=24%  Similarity=0.371  Sum_probs=67.5

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +..+++|||+.+++|.+.+...           .++.|++.++.++|+.+++|+|+++.|+++.   ....+++.|||.+
T Consensus        74 ~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~---~~~~~~l~dfg~~  150 (258)
T smart00219       74 EPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG---ENLVVKISDFGLS  150 (258)
T ss_pred             CeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc---cCCeEEEcccCCc
Confidence            5789999999999998887532           2678999999999999999999999999994   4557999999998


Q ss_pred             ecCCCCCCccc--eeeccceeccc
Q psy14897         76 KNVPSSPSYER--HVTTQTTRIGR   97 (99)
Q Consensus        76 ~~~~~~~~~~~--~~~t~~~~~~~   97 (99)
                      ........+..  ..++..|.+||
T Consensus       151 ~~~~~~~~~~~~~~~~~~~y~~Pe  174 (258)
T smart00219      151 RDLYDDDYYKKKGGKLPIRWMAPE  174 (258)
T ss_pred             eecccccccccccCCCcccccChH
Confidence            87654422211  11334555555

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.41  E-value=1.4e-12  Score=81.91  Aligned_cols=87  Identities=25%  Similarity=0.394  Sum_probs=65.6

Q ss_pred             eEEEEEeeCCCCchhhhcc--------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          9 SCLVFPYSYGTKSGEQIST--------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~l~~--------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .++||||+.+ ++.+++..              ..++.|++.++.|+|+++++|+++++.|+++.  .....+++.|||.
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~--~~~~~~kl~dfg~  157 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVD--KQKGLLKIADLGL  157 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEe--cCCCeEEEeeccc
Confidence            7999999986 77776532              12789999999999999999999999999995  2256789999999


Q ss_pred             eecCCCC-CCccceeeccceecccc
Q psy14897         75 AKNVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      +..+... ..+....++..|.+||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~aPE~  182 (295)
T cd07837         158 GRAFSIPVKSYTHEIVTLWYRAPEV  182 (295)
T ss_pred             ceecCCCccccCCcccccCCCChHH
Confidence            8865332 22233345666777763

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.41  E-value=1.2e-12  Score=79.85  Aligned_cols=90  Identities=24%  Similarity=0.403  Sum_probs=72.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +...++++||+.+++|.+.+...          .++.|++.++.++|..+++|+++++.|+++.   ....+++.|||.+
T Consensus        69 ~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~~~~  145 (253)
T cd05122          69 KDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT---SDGEVKLIDFGLS  145 (253)
T ss_pred             CCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc---cCCeEEEeecccc
Confidence            35689999999999999887654          1678999999999999999999999999994   4567999999998


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .............++..|.+||+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~PE~  168 (253)
T cd05122         146 AQLSDTKARNTMVGTPYWMAPEV  168 (253)
T ss_pred             ccccccccccceecCCcccCHHH
Confidence            87765432234456667777764

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.41  E-value=6.5e-13  Score=82.24  Aligned_cols=89  Identities=22%  Similarity=0.259  Sum_probs=67.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      .+..++||||+.+|+|.+.+..             ..++.|++.++.|+|+++++|+|+++.|+++.   ....+++.||
T Consensus        74 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~---~~~~~~l~d~  150 (267)
T cd08228          74 DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDL  150 (267)
T ss_pred             CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc---CCCCEEECcc
Confidence            3568999999999999877632             12678999999999999999999999999995   4456899999


Q ss_pred             cceecCCCCCCc-cceeeccceeccc
Q psy14897         73 GLAKNVPSSPSY-ERHVTTQTTRIGR   97 (99)
Q Consensus        73 g~a~~~~~~~~~-~~~~~t~~~~~~~   97 (99)
                      |.+..+...... ....++..|.+||
T Consensus       151 g~~~~~~~~~~~~~~~~~~~~~~aPE  176 (267)
T cd08228         151 GLGRFFSSKTTAAHSLVGTPYYMSPE  176 (267)
T ss_pred             ccceeccchhHHHhcCCCCccccChh
Confidence            998876433211 1224455566666

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG2052|consensus

Probab=99.41  E-value=6.4e-13  Score=87.02  Aligned_cols=89  Identities=22%  Similarity=0.232  Sum_probs=73.5

Q ss_pred             CCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhC--------CeeecCcCCCcEEEeeCCCCCeEEEe
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSR--------NFIHRDIKPDNFLMGLGKRGNLVYII   70 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~--------~i~h~~l~~~~~l~~~~~~~~~~~l~   70 (99)
                      .++|+|.||-++|+|+++|...-        ++..++.||.+||..        .|.|||+|+.||++.   +...+-++
T Consensus       282 TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVK---kn~~C~IA  358 (513)
T KOG2052|consen  282 TQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTCCIA  358 (513)
T ss_pred             EEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEc---cCCcEEEe
Confidence            46999999999999999998643        778899999999963        489999999999995   55669999


Q ss_pred             eccceecCCCC-----CCccceeeccceecccc
Q psy14897         71 DFGLAKNVPSS-----PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        71 d~g~a~~~~~~-----~~~~~~~~t~~~~~~~~   98 (99)
                      |+|+|-.....     -.....+||.-|.+||+
T Consensus       359 DLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEv  391 (513)
T KOG2052|consen  359 DLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEV  391 (513)
T ss_pred             eceeeEEecccCCcccCCCCCccceeeccChHH
Confidence            99998765333     12356799999999985

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.41  E-value=8.5e-13  Score=83.45  Aligned_cols=91  Identities=26%  Similarity=0.323  Sum_probs=66.7

Q ss_pred             CCeEEEEEeeCCCCchhhhcc--------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEee-CCCCCeEEEee
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST--------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL-GKRGNLVYIID   71 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~--------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~-~~~~~~~~l~d   71 (99)
                      ..+++||||+.+ ++.+.+..              ..++.|++.++.|+|+.+++|+|+++.|+++.. ......+++.|
T Consensus        77 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~D  155 (316)
T cd07842          77 KSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGD  155 (316)
T ss_pred             ceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECC
Confidence            568999999976 56554421              126789999999999999999999999999952 11156799999


Q ss_pred             ccceecCCCCCC----ccceeeccceecccc
Q psy14897         72 FGLAKNVPSSPS----YERHVTTQTTRIGRI   98 (99)
Q Consensus        72 ~g~a~~~~~~~~----~~~~~~t~~~~~~~~   98 (99)
                      ||++..+.....    .....++..|.+||.
T Consensus       156 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  186 (316)
T cd07842         156 LGLARLFNAPLKPLADLDPVVVTIWYRAPEL  186 (316)
T ss_pred             CccccccCCCcccccccCCccccccccCHHH
Confidence            999886643322    123356777888873

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.40  E-value=1.1e-12  Score=82.28  Aligned_cols=71  Identities=30%  Similarity=0.534  Sum_probs=60.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------------------hHHHHHHHHHHHHhhCCeeecCcCCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------------------KEDREWIGRIDYIHSRNFIHRDIKPD   54 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~   54 (99)
                      +...++||||+.+|+|.+++...                               .++.|++.++.|+|.++++|+|+++.
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~  159 (288)
T cd05050          80 GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATR  159 (288)
T ss_pred             CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHh
Confidence            35689999999999999888531                               37899999999999999999999999


Q ss_pred             cEEEeeCCCCCeEEEeeccceecCC
Q psy14897         55 NFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus        55 ~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      |+++.   ....+++.|||.++.+.
T Consensus       160 nil~~---~~~~~~l~dfg~~~~~~  181 (288)
T cd05050         160 NCLVG---ENMVVKIADFGLSRNIY  181 (288)
T ss_pred             heEec---CCCceEECccccceecc
Confidence            99994   45568999999987653

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.40  E-value=1.7e-12  Score=79.96  Aligned_cols=72  Identities=26%  Similarity=0.443  Sum_probs=60.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ....++||||+.+++|.+.+...          .++.|++.++.++|+.+++|+|+++.|+++.   ....+++.|||.+
T Consensus        71 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~  147 (256)
T cd05112          71 RSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG---ENQVVKVSDFGMT  147 (256)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc---CCCeEEECCCcce
Confidence            35689999999999998887532          2678899999999999999999999999994   5566899999998


Q ss_pred             ecCCC
Q psy14897         76 KNVPS   80 (99)
Q Consensus        76 ~~~~~   80 (99)
                      .....
T Consensus       148 ~~~~~  152 (256)
T cd05112         148 RFVLD  152 (256)
T ss_pred             eeccc
Confidence            76543

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.40  E-value=1.2e-12  Score=80.60  Aligned_cols=90  Identities=21%  Similarity=0.296  Sum_probs=68.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.+++|.+.+...           .++.|++.++.++|+++++|+++++.|+++.   ....+++.|||.
T Consensus        71 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~---~~~~~~l~d~~~  147 (256)
T cd08218          71 NGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTIKLGDFGI  147 (256)
T ss_pred             CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEEeeccc
Confidence            45789999999999998877532           2678999999999999999999999999994   445689999999


Q ss_pred             eecCCCCCCc-cceeeccceecccc
Q psy14897         75 AKNVPSSPSY-ERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~-~~~~~t~~~~~~~~   98 (99)
                      +..+...... ....++..|.+||.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~pe~  172 (256)
T cd08218         148 ARVLNSTVELARTCIGTPYYLSPEI  172 (256)
T ss_pred             eeecCcchhhhhhccCCccccCHHH
Confidence            8766443211 12235555666663

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.40  E-value=1.1e-12  Score=80.63  Aligned_cols=88  Identities=22%  Similarity=0.339  Sum_probs=68.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      +...++||||+.+++|.+++...             .++.|++.++.++|+.+++|+++++.|+++.   ....+++.||
T Consensus        71 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~---~~~~~kl~d~  147 (256)
T cd08530          71 GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV---ANDLVKIGDL  147 (256)
T ss_pred             CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe---cCCcEEEeec
Confidence            46789999999999998887541             2678999999999999999999999999995   3556999999


Q ss_pred             cceecCCCCCCccceeeccceeccc
Q psy14897         73 GLAKNVPSSPSYERHVTTQTTRIGR   97 (99)
Q Consensus        73 g~a~~~~~~~~~~~~~~t~~~~~~~   97 (99)
                      |.+...... ......++..|.+||
T Consensus       148 g~~~~~~~~-~~~~~~~~~~~~~Pe  171 (256)
T cd08530         148 GISKVLKKN-MAKTQIGTPHYMAPE  171 (256)
T ss_pred             cchhhhccC-CcccccCCccccCHH
Confidence            998776544 222234555666665

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.40  E-value=4.5e-13  Score=82.82  Aligned_cols=89  Identities=21%  Similarity=0.354  Sum_probs=69.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++|+||+.+++|.+.+...          .++.|++.++.|+|+ .+++|+++++.|+++.   ....+++.|||.
T Consensus        71 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~---~~~~~~l~d~g~  147 (265)
T cd06605          71 NGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN---SRGQIKLCDFGV  147 (265)
T ss_pred             CCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC---CCCCEEEeeccc
Confidence            46789999999999999988643          277899999999999 9999999999999995   455699999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +..+..... ....++..|.+||.
T Consensus       148 ~~~~~~~~~-~~~~~~~~y~~PE~  170 (265)
T cd06605         148 SGQLVNSLA-KTFVGTSSYMAPER  170 (265)
T ss_pred             chhhHHHHh-hcccCChhccCHHH
Confidence            876543221 12455666666663

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.40  E-value=1.1e-12  Score=84.06  Aligned_cols=87  Identities=28%  Similarity=0.394  Sum_probs=67.1

Q ss_pred             CeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ..++||||+. ++|.+.+...         .++.|++.++.|+|+++++|+++++.|+++.   ....+++.|||++...
T Consensus        83 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~~~~~  158 (337)
T cd07858          83 DVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN---ANCDLKICDFGLARTT  158 (337)
T ss_pred             cEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECcCcccccc
Confidence            4799999996 5787776542         2789999999999999999999999999994   4556999999998876


Q ss_pred             CCCCC-ccceeeccceecccc
Q psy14897         79 PSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      ..... .....++..|.+||.
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~  179 (337)
T cd07858         159 SEKGDFMTEYVVTRWYRAPEL  179 (337)
T ss_pred             CCCcccccccccccCccChHH
Confidence            44321 122355677777773

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.40  E-value=1.4e-12  Score=80.78  Aligned_cols=74  Identities=22%  Similarity=0.296  Sum_probs=60.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCC--CCCeE
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGK--RGNLV   67 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~--~~~~~   67 (99)
                      .+..++||||+.+++|.+++...                .++.|++.++.|+|+.+++|+|+++.|+++..+.  ....+
T Consensus        71 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~  150 (269)
T cd05044          71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVV  150 (269)
T ss_pred             CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcce
Confidence            45689999999999999887531                1678999999999999999999999999985222  12268


Q ss_pred             EEeeccceecCC
Q psy14897         68 YIIDFGLAKNVP   79 (99)
Q Consensus        68 ~l~d~g~a~~~~   79 (99)
                      ++.|||+++.+.
T Consensus       151 ~l~dfg~~~~~~  162 (269)
T cd05044         151 KIGDFGLARDIY  162 (269)
T ss_pred             EECCcccccccc
Confidence            999999987654

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.39  E-value=1.3e-12  Score=82.39  Aligned_cols=88  Identities=27%  Similarity=0.429  Sum_probs=66.5

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++||||+.+ ++.+.+...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+.
T Consensus        92 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~  167 (310)
T cd07865          92 GSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT---KDGILKLADFGLAR  167 (310)
T ss_pred             ceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC---CCCcEEECcCCCcc
Confidence            356999999975 676655432          2789999999999999999999999999994   45669999999987


Q ss_pred             cCCCCCC-----ccceeeccceecccc
Q psy14897         77 NVPSSPS-----YERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~-----~~~~~~t~~~~~~~~   98 (99)
                      .+.....     .....++..|.+||+
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~  194 (310)
T cd07865         168 AFSLSKNSKPNRYTNRVVTLWYRPPEL  194 (310)
T ss_pred             cccCCcccCCCCccCcccCccccCcHH
Confidence            6643221     122345667888874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.39  E-value=1.6e-12  Score=79.74  Aligned_cols=89  Identities=21%  Similarity=0.295  Sum_probs=69.8

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ...++||||+.+++|.+.+...         .++.|++.++.++|+.+++|+++++.|+++.   ....+++.|||.+..
T Consensus        72 ~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~  148 (254)
T cd06627          72 DSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTT---KDGVVKLADFGVATK  148 (254)
T ss_pred             CEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEC---CCCCEEEecccccee
Confidence            5689999999999998887542         2779999999999999999999999999994   456689999999987


Q ss_pred             CCCCCCc-cceeeccceecccc
Q psy14897         78 VPSSPSY-ERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~~-~~~~~t~~~~~~~~   98 (99)
                      ....... ....++..|.+||.
T Consensus       149 ~~~~~~~~~~~~~~~~y~~pe~  170 (254)
T cd06627         149 LNDVSKDDASVVGTPYWMAPEV  170 (254)
T ss_pred             cCCCcccccccccchhhcCHhh
Confidence            6544321 22345566666663

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.39  E-value=1.1e-12  Score=80.98  Aligned_cols=90  Identities=28%  Similarity=0.431  Sum_probs=70.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      +...++||||+.+++|.+.+...            .++.|++.++.++|+.+++|+++++.|+++.   ....+++.|||
T Consensus        71 ~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~---~~~~~~l~df~  147 (267)
T cd06610          71 GDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG---EDGSVKIADFG  147 (267)
T ss_pred             CCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEcccc
Confidence            45689999999999998887531            2679999999999999999999999999995   34568999999


Q ss_pred             ceecCCCCCCc-----cceeeccceecccc
Q psy14897         74 LAKNVPSSPSY-----ERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~~-----~~~~~t~~~~~~~~   98 (99)
                      .+..+......     ....++..|.+||.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~  177 (267)
T cd06610         148 VSASLADGGDRTRKVRKTFVGTPCWMAPEV  177 (267)
T ss_pred             hHHHhccCccccccccccccCChhhcChHH
Confidence            98776543221     22345666777764

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.39  E-value=2.1e-12  Score=80.43  Aligned_cols=89  Identities=26%  Similarity=0.413  Sum_probs=69.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+ ++.+.+..+          .++.|++.++.++|+.+++|+|+++.|+++.   ....+++.|||.+
T Consensus        70 ~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~df~~~  145 (283)
T cd05118          70 KGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN---TEGVLKLADFGLA  145 (283)
T ss_pred             CCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC---CCCcEEEeeeeee
Confidence            3678999999976 777776543          2779999999999999999999999999994   4566999999998


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ....... ......++..|.+||.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~PE~  169 (283)
T cd05118         146 RSFGSPVRPYTHYVVTRWYRAPEL  169 (283)
T ss_pred             EecCCCcccccCccCcccccCcHH
Confidence            8765543 2223345666777764

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0671|consensus

Probab=99.39  E-value=2.8e-12  Score=82.59  Aligned_cols=89  Identities=20%  Similarity=0.352  Sum_probs=70.0

Q ss_pred             CCeEEEEEeeCCCCchhhhccch-----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCC-------------
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK-----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGK-------------   62 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~-----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~-------------   62 (99)
                      +..|+|+|.+.. +++++++++.           ++.|++.++.|||+.+++|-|++|+||++-.+.             
T Consensus       164 ghiCivfellG~-S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~  242 (415)
T KOG0671|consen  164 GHICIVFELLGL-STFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF  242 (415)
T ss_pred             CceEEEEeccCh-hHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccce
Confidence            567889998843 8899998754           678999999999999999999999999863211             


Q ss_pred             ----CCCeEEEeeccceecCCCCCCccceeeccceecccc
Q psy14897         63 ----RGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        63 ----~~~~~~l~d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                          +...+++.|||.|..-....  ...+.|+-|++||+
T Consensus       243 ~r~~ks~~I~vIDFGsAtf~~e~h--s~iVsTRHYRAPEV  280 (415)
T KOG0671|consen  243 IRPLKSTAIKVIDFGSATFDHEHH--STIVSTRHYRAPEV  280 (415)
T ss_pred             eccCCCcceEEEecCCcceeccCc--ceeeeccccCCchh
Confidence                12347899999987544333  55788999999996

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.39  E-value=1.7e-12  Score=80.13  Aligned_cols=70  Identities=29%  Similarity=0.469  Sum_probs=60.6

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ...++||||+.+++|.+.+...           .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        74 ~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~---~~~~~~l~d~g~~  150 (261)
T cd05034          74 EPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG---ENLVCKIADFGLA  150 (261)
T ss_pred             CceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc---CCCCEEECccccc
Confidence            5689999999999999888542           2778999999999999999999999999995   4566899999998


Q ss_pred             ecCC
Q psy14897         76 KNVP   79 (99)
Q Consensus        76 ~~~~   79 (99)
                      ..+.
T Consensus       151 ~~~~  154 (261)
T cd05034         151 RLIE  154 (261)
T ss_pred             eecc
Confidence            7664

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.38  E-value=1.6e-12  Score=80.79  Aligned_cols=72  Identities=29%  Similarity=0.456  Sum_probs=62.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+++|.+.+...         .++.|++.++.++|+.+++|+++++.|+++.   ....+++.|||.+.
T Consensus        74 ~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~---~~~~~~l~df~~~~  150 (280)
T cd05581          74 EENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD---KDMHIKITDFGTAK  150 (280)
T ss_pred             CceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEecCCcccc
Confidence            45789999999999999888654         2779999999999999999999999999994   45568999999987


Q ss_pred             cCCC
Q psy14897         77 NVPS   80 (99)
Q Consensus        77 ~~~~   80 (99)
                      ....
T Consensus       151 ~~~~  154 (280)
T cd05581         151 VLDP  154 (280)
T ss_pred             ccCC
Confidence            6643

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.38  E-value=1.3e-12  Score=81.82  Aligned_cols=88  Identities=22%  Similarity=0.354  Sum_probs=67.6

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +..++||||+.+++|.+.+...         .++.+++.++.|+|+ .+++|+++++.|+++.   ....+++.|||++.
T Consensus        76 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~d~gl~~  152 (284)
T cd06620          76 NNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVN---SRGQIKLCDFGVSG  152 (284)
T ss_pred             CEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEEC---CCCcEEEccCCccc
Confidence            5689999999999998877542         367899999999997 6899999999999994   45669999999887


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ....... ....++..|.+||.
T Consensus       153 ~~~~~~~-~~~~~~~~~~aPE~  173 (284)
T cd06620         153 ELINSIA-DTFVGTSTYMSPER  173 (284)
T ss_pred             chhhhcc-CccccCcccCCHHH
Confidence            5532211 23355666666663

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.38  E-value=1.5e-12  Score=83.06  Aligned_cols=88  Identities=27%  Similarity=0.336  Sum_probs=69.8

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ...++||||+.+ +|.+.+...         .++.|++.++.++|+.+++|+|+++.|+++.   ....+++.|||.+..
T Consensus        77 ~~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~---~~~~~~L~dfg~~~~  152 (330)
T cd07834          77 NDVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN---SNCDLKICDFGLARG  152 (330)
T ss_pred             cceEEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEcccCceEe
Confidence            368999999985 787777543         2779999999999999999999999999995   446799999999987


Q ss_pred             CCCCC----Cccceeeccceecccc
Q psy14897         78 VPSSP----SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~----~~~~~~~t~~~~~~~~   98 (99)
                      .....    ......++.+|.+||.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~aPE~  177 (330)
T cd07834         153 VDPDEDEKGFLTEYVVTRWYRAPEL  177 (330)
T ss_pred             ecccccccccccccccccCcCCcee
Confidence            65543    1233456777888874

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.38  E-value=2e-12  Score=82.72  Aligned_cols=70  Identities=21%  Similarity=0.344  Sum_probs=58.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+. |+|.+.+..+         .++.|++.++.++|+.+++|+|+++.|+++.   ....+++.|||.+.
T Consensus        92 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~---~~~~~kl~dfg~~~  167 (335)
T PTZ00024         92 GDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFIN---SKGICKIADFGLAR  167 (335)
T ss_pred             CCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEEC---CCCCEEECCcccee
Confidence            356899999997 5888877543         2789999999999999999999999999994   45568999999987


Q ss_pred             cCC
Q psy14897         77 NVP   79 (99)
Q Consensus        77 ~~~   79 (99)
                      ...
T Consensus       168 ~~~  170 (335)
T PTZ00024        168 RYG  170 (335)
T ss_pred             ecc
Confidence            654

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.38  E-value=2.5e-12  Score=82.39  Aligned_cols=88  Identities=32%  Similarity=0.428  Sum_probs=67.9

Q ss_pred             CCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ...++||||+.+ +|.+.+..+        .++.|++.++.|||+.+++|+|+++.|++++   ....+++.|||.+..+
T Consensus        82 ~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~---~~~~~kl~d~g~~~~~  157 (337)
T cd07852          82 KDIYLVFEYMET-DLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLN---SDCRVKLADFGLARSL  157 (337)
T ss_pred             ceEEEEeccccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEEeeccchhcc
Confidence            357999999974 887776542        2679999999999999999999999999995   5566999999998876


Q ss_pred             CCCC------Cccceeeccceecccc
Q psy14897         79 PSSP------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~------~~~~~~~t~~~~~~~~   98 (99)
                      ....      ......++..|.+||.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~aPE~  183 (337)
T cd07852         158 SELEENPENPVLTDYVATRWYRAPEI  183 (337)
T ss_pred             ccccccccCcchhcccccccccCcee
Confidence            4332      1122356777888873

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.38  E-value=1.5e-12  Score=83.76  Aligned_cols=89  Identities=27%  Similarity=0.377  Sum_probs=66.8

Q ss_pred             CCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ...++||||+.+ +|.+.+...        .++.|++.++.|||+.+++|+|+++.|+++.  .....+++.|||.++.+
T Consensus        89 ~~~~lv~e~~~~-~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~--~~~~~~kl~dfg~~~~~  165 (342)
T cd07854          89 NSVYIVQEYMET-DLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFIN--TEDLVLKIGDFGLARIV  165 (342)
T ss_pred             ceEEEEeecccc-cHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc--CCCceEEECCcccceec
Confidence            357899999974 887766532        2789999999999999999999999999984  34456899999998765


Q ss_pred             CCCC----Cccceeeccceecccc
Q psy14897         79 PSSP----SYERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~----~~~~~~~t~~~~~~~~   98 (99)
                      ....    ......++..|.+||.
T Consensus       166 ~~~~~~~~~~~~~~~~~~y~aPE~  189 (342)
T cd07854         166 DPHYSHKGYLSEGLVTKWYRSPRL  189 (342)
T ss_pred             CCccccccccccccccccccCHHH
Confidence            3221    1122345667888873

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.38  E-value=3.8e-12  Score=79.31  Aligned_cols=71  Identities=30%  Similarity=0.480  Sum_probs=61.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ....++||||+.+++|.+++....          ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        80 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~  156 (284)
T cd05038          80 GRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE---SEDLVKISDFGLA  156 (284)
T ss_pred             CCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEcccccc
Confidence            346899999999999999886432          778999999999999999999999999994   4566999999998


Q ss_pred             ecCC
Q psy14897         76 KNVP   79 (99)
Q Consensus        76 ~~~~   79 (99)
                      ....
T Consensus       157 ~~~~  160 (284)
T cd05038         157 KVLP  160 (284)
T ss_pred             cccc
Confidence            8765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.38  E-value=4e-12  Score=77.16  Aligned_cols=72  Identities=21%  Similarity=0.164  Sum_probs=58.7

Q ss_pred             CCeEEEEEeeCCCCchhhhcc--chHHHHHHHHHHHHhhCCeeecCc-CCCcEEEeeCCCCCeEEEeeccceecCCCC
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST--GKEDREWIGRIDYIHSRNFIHRDI-KPDNFLMGLGKRGNLVYIIDFGLAKNVPSS   81 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~--~~~~~~i~~~l~~lh~~~i~h~~l-~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~   81 (99)
                      +..+++|||+.|.+|...+..  ..++.|++.++.++|+.|++|+|+ ++.|+++.   ....++++|||++......
T Consensus        71 ~~~~lvmeyI~G~~L~~~~~~~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~---~~g~i~LIDFG~A~~~~~~  145 (218)
T PRK12274         71 DGRHLDRSYLAGAAMYQRPPRGDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ---EDGSPAVIDFQLAVRGNPR  145 (218)
T ss_pred             cCEEEEEeeecCccHHhhhhhhhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc---CCCCEEEEECCCceecCCc
Confidence            457999999999998765432  236789999999999999999999 78999994   3456899999999865443

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.37  E-value=1.8e-12  Score=81.73  Aligned_cols=66  Identities=27%  Similarity=0.399  Sum_probs=51.7

Q ss_pred             HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCCC--------Cccceeeccceecccc
Q psy14897         30 EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSP--------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        30 ~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~--------~~~~~~~t~~~~~~~~   98 (99)
                      ++.|++.++.|+|+++++|||++|+|+++.   ....+++.|||+++.+....        ......+|..|.+|++
T Consensus       131 i~~qi~~~l~~lH~~~iiHrDiKp~Nill~---~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~  204 (294)
T PHA02882        131 IMKDMLTTLEYIHEHGISHGDIKPENIMVD---GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDA  204 (294)
T ss_pred             HHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHH
Confidence            789999999999999999999999999994   44568999999998764221        1122357777887764

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.37  E-value=1.7e-12  Score=83.16  Aligned_cols=88  Identities=28%  Similarity=0.331  Sum_probs=67.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ...++|+||+.+ ++.+.+..+.        ++.|++.++.+||+.+++|+|+++.|+++.   ....+++.|||++...
T Consensus        81 ~~~~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~---~~~~~kl~dfg~~~~~  156 (336)
T cd07849          81 NDVYIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TNCDLKICDFGLARIA  156 (336)
T ss_pred             ceEEEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---CCCCEEECcccceeec
Confidence            357999999975 7777665432        678999999999999999999999999994   5566999999998765


Q ss_pred             CCCCCc----cceeeccceecccc
Q psy14897         79 PSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      ......    ....++..|.+||.
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~  180 (336)
T cd07849         157 DPEHDHTGFLTEYVATRWYRAPEI  180 (336)
T ss_pred             cccccccCCcCCcCcCCCccChHH
Confidence            432211    22356677777773

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.37  E-value=2.4e-12  Score=78.81  Aligned_cols=89  Identities=24%  Similarity=0.323  Sum_probs=71.5

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ...++|+||+.+++|.+.+...         .++.|++.++.|+|+.+++|+++++.|+++.   ....+++.|||.+..
T Consensus        74 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~---~~~~~~l~d~~~~~~  150 (260)
T cd06606          74 NTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD---SDGVVKLADFGCAKR  150 (260)
T ss_pred             CeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCCCEEEcccccEEe
Confidence            5689999999999999887653         2789999999999999999999999999994   456689999999887


Q ss_pred             CCCCCC---ccceeeccceecccc
Q psy14897         78 VPSSPS---YERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~---~~~~~~t~~~~~~~~   98 (99)
                      ......   .....++..|.+||.
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~~pE~  174 (260)
T cd06606         151 LGDIETGEGTGSVRGTPYWMAPEV  174 (260)
T ss_pred             cccccccccccCCCCCccccCHhh
Confidence            755432   233456666777764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.37  E-value=2.3e-12  Score=79.27  Aligned_cols=90  Identities=24%  Similarity=0.298  Sum_probs=68.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      +...++|+||+.+++|.+.+...           .++.|++.++.|+|+.+++|+|+++.|+++.  .....+++.|||.
T Consensus        71 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~--~~~~~~~l~d~~~  148 (257)
T cd08225          71 NGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLS--KNGMVAKLGDFGI  148 (257)
T ss_pred             CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEc--CCCCeEEeccccc
Confidence            45689999999999998877532           2678999999999999999999999999995  3344579999998


Q ss_pred             eecCCCCCCc-cceeeccceeccc
Q psy14897         75 AKNVPSSPSY-ERHVTTQTTRIGR   97 (99)
Q Consensus        75 a~~~~~~~~~-~~~~~t~~~~~~~   97 (99)
                      +..+...... ....++..|.+||
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~ape  172 (257)
T cd08225         149 ARQLNDSMELAYTCVGTPYYLSPE  172 (257)
T ss_pred             chhccCCcccccccCCCccccCHH
Confidence            8776543221 1223555666666

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG1152|consensus

Probab=99.37  E-value=1.4e-12  Score=87.96  Aligned_cols=89  Identities=24%  Similarity=0.305  Sum_probs=72.7

Q ss_pred             CCCeEEEEEeeC-CCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSY-GTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~-~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..|++||-=. +-||++++..+         .++.|++.++++||+.+|+|||+|-+|+.+.   ..+.+++.|||.+
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd---~~g~~klidfgsa  717 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVD---SNGFVKLIDFGSA  717 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEe---cCCeEEEeeccch
Confidence            345678888643 44888888543         3889999999999999999999999999995   5566999999998


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .....++ ...++||-.|++||+
T Consensus       718 a~~ksgp-fd~f~gtv~~aapev  739 (772)
T KOG1152|consen  718 AYTKSGP-FDVFVGTVDYAAPEV  739 (772)
T ss_pred             hhhcCCC-cceeeeeccccchhh
Confidence            8765554 577899999999985

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.36  E-value=2.5e-12  Score=82.26  Aligned_cols=88  Identities=30%  Similarity=0.403  Sum_probs=66.9

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ...++++||+. ++|.+.+...         .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+..
T Consensus        79 ~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~---~~~~~kl~Dfg~a~~  154 (332)
T cd07857          79 NELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN---ADCELKICDFGLARG  154 (332)
T ss_pred             CcEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc---CCCCEEeCcCCCcee
Confidence            35788888886 5788777532         2779999999999999999999999999994   455689999999986


Q ss_pred             CCCCCC-----ccceeeccceecccc
Q psy14897         78 VPSSPS-----YERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~-----~~~~~~t~~~~~~~~   98 (99)
                      +.....     .....++..|.+||.
T Consensus       155 ~~~~~~~~~~~~~~~~g~~~y~aPE~  180 (332)
T cd07857         155 FSENPGENAGFMTEYVATRWYRAPEI  180 (332)
T ss_pred             cccccccccccccCcccCccccCcHH
Confidence            643221     122356777888874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.36  E-value=3.8e-12  Score=78.02  Aligned_cols=88  Identities=28%  Similarity=0.423  Sum_probs=68.8

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      ...++|+||+.+++|.+.+...             .++.+++.++.++|+.+++|+++++.|+++.   ....+++.|||
T Consensus        72 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~---~~~~~~l~d~~  148 (258)
T cd08215          72 GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT---SNGLVKLGDFG  148 (258)
T ss_pred             CEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc---CCCcEEECCcc
Confidence            6789999999999998887642             2778999999999999999999999999994   45668999999


Q ss_pred             ceecCCCCC-Cccceeeccceeccc
Q psy14897         74 LAKNVPSSP-SYERHVTTQTTRIGR   97 (99)
Q Consensus        74 ~a~~~~~~~-~~~~~~~t~~~~~~~   97 (99)
                      .+....... ......++..|.+||
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~y~~pe  173 (258)
T cd08215         149 ISKVLSSTVDLAKTVVGTPYYLSPE  173 (258)
T ss_pred             ceeecccCcceecceeeeecccChh
Confidence            987664432 112234555566665

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.36  E-value=3.4e-12  Score=79.57  Aligned_cols=88  Identities=25%  Similarity=0.403  Sum_probs=68.7

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +..++||||+.+ +|.+.+...          .++.|++.++.++|..+++|+++++.|+++.   ....+++.|||.+.
T Consensus        73 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~---~~~~~~l~d~g~~~  148 (287)
T cd07840          73 GSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN---NDGVLKLADFGLAR  148 (287)
T ss_pred             CcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEc---CCCCEEEcccccee
Confidence            578999999985 787776543          2779999999999999999999999999995   45669999999988


Q ss_pred             cCCCCC--Cccceeeccceecccc
Q psy14897         77 NVPSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      ......  ......++..|.+||.
T Consensus       149 ~~~~~~~~~~~~~~~~~~y~~PE~  172 (287)
T cd07840         149 PYTKRNSADYTNRVITLWYRPPEL  172 (287)
T ss_pred             eccCCCcccccccccccccCCcee
Confidence            765442  1233345666777773

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.36  E-value=3e-12  Score=82.42  Aligned_cols=84  Identities=31%  Similarity=0.468  Sum_probs=64.6

Q ss_pred             CeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      ..++||||+ +++|.+.+...        .++.|++.++.|+|+.+++|+++++.|+++.   ....+++.|||.+....
T Consensus        94 ~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~---~~~~~kl~dfg~~~~~~  169 (343)
T cd07880          94 DFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLARQTD  169 (343)
T ss_pred             eEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccccccc
Confidence            458999998 66887776532        2789999999999999999999999999994   45568999999988654


Q ss_pred             CCCCccceeeccceeccc
Q psy14897         80 SSPSYERHVTTQTTRIGR   97 (99)
Q Consensus        80 ~~~~~~~~~~t~~~~~~~   97 (99)
                      ...  ....++..|.+||
T Consensus       170 ~~~--~~~~~~~~y~aPE  185 (343)
T cd07880         170 SEM--TGYVVTRWYRAPE  185 (343)
T ss_pred             cCc--cccccCCcccCHH
Confidence            322  2234566666666

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.35  E-value=3.9e-12  Score=78.55  Aligned_cols=88  Identities=22%  Similarity=0.338  Sum_probs=66.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      ....++||||+.+++|.+.+..             ..++.|++.++.|+|+.+++|+++++.|+++.   . ..+++.||
T Consensus        74 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~---~-~~~~l~d~  149 (260)
T cd08222          74 RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK---N-NLLKIGDF  149 (260)
T ss_pred             CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee---c-CCEeeccc
Confidence            4568999999999999887642             12678999999999999999999999999984   2 34899999


Q ss_pred             cceecCCCCCCc-cceeeccceeccc
Q psy14897         73 GLAKNVPSSPSY-ERHVTTQTTRIGR   97 (99)
Q Consensus        73 g~a~~~~~~~~~-~~~~~t~~~~~~~   97 (99)
                      |.+..+...... ....++..|.+||
T Consensus       150 g~~~~~~~~~~~~~~~~~~~~~~~pe  175 (260)
T cd08222         150 GVSRLLMGSCDLATTFTGTPYYMSPE  175 (260)
T ss_pred             CceeecCCCcccccCCCCCcCccCHH
Confidence            998776433221 2233455566665

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.35  E-value=4.6e-12  Score=79.15  Aligned_cols=90  Identities=24%  Similarity=0.393  Sum_probs=67.0

Q ss_pred             CCCCeEEEEEeeCCCCchhhhcc-----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQIST-----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~-----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      .++..++||||+. ++|.+.+..           ..++.|++.++.|+|+.+++|+++++.|+++.   ....+++.|||
T Consensus        70 ~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~---~~~~~~l~dfg  145 (284)
T cd07860          70 TENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG  145 (284)
T ss_pred             cCCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEeecc
Confidence            3457899999996 577776642           12678999999999999999999999999994   45568999999


Q ss_pred             ceecCCCCC-Cccceeeccceecccc
Q psy14897         74 LAKNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      .+..+.... ......++..|.+||+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~y~aPE~  171 (284)
T cd07860         146 LARAFGVPVRTYTHEVVTLWYRAPEI  171 (284)
T ss_pred             chhhcccCccccccccccccccCCeE
Confidence            987654322 2222345666777763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.35  E-value=3.3e-12  Score=80.01  Aligned_cols=90  Identities=30%  Similarity=0.431  Sum_probs=69.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++|+||+.+++|.+.+....          ++.|++.++.++|+.+++|+++++.|+++.   ....+++.|||.+
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~---~~~~~~l~d~~~~  163 (286)
T cd06614          87 GDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS---KDGSVKLADFGFA  163 (286)
T ss_pred             CCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc---CCCCEEECccchh
Confidence            357899999999999999887652          678999999999999999999999999994   4556899999987


Q ss_pred             ecCCCCCC-ccceeeccceecccc
Q psy14897         76 KNVPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      ........ .....++..|.+||+
T Consensus       164 ~~~~~~~~~~~~~~~~~~y~~PE~  187 (286)
T cd06614         164 AQLTKEKSKRNSVVGTPYWMAPEV  187 (286)
T ss_pred             hhhccchhhhccccCCcccCCHhH
Confidence            66543221 122234556666664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.35  E-value=5.4e-12  Score=78.54  Aligned_cols=89  Identities=28%  Similarity=0.443  Sum_probs=68.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+ +|.+.+...          .++.|++.++.++|+.+++|+++++.|+++.   ....+++.|||.+
T Consensus        70 ~~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~---~~~~~~l~d~g~~  145 (282)
T cd07829          70 ERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILIN---RDGVLKLADFGLA  145 (282)
T ss_pred             CCceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEc---CCCCEEEecCCcc
Confidence            3678999999984 888877653          2779999999999999999999999999995   4566899999998


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ....... .......+..|.+||.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~aPE~  169 (282)
T cd07829         146 RAFGIPLRTYTHEVVTLWYRAPEI  169 (282)
T ss_pred             cccCCCccccCccccCcCcCChHH
Confidence            8764432 2223344556777763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.34  E-value=4.6e-12  Score=79.74  Aligned_cols=87  Identities=30%  Similarity=0.432  Sum_probs=64.2

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++||||+.+ ++...+...          .++.|++.++.|||+.+++|+|+++.|+++.   ....+++.|||.+.
T Consensus        89 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~---~~~~~kl~dfg~~~  164 (302)
T cd07864          89 GAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN---NKGQIKLADFGLAR  164 (302)
T ss_pred             CcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCcEEeCcccccc
Confidence            368999999987 555554421          2779999999999999999999999999994   55669999999987


Q ss_pred             cCCCCC--Cccceeeccceeccc
Q psy14897         77 NVPSSP--SYERHVTTQTTRIGR   97 (99)
Q Consensus        77 ~~~~~~--~~~~~~~t~~~~~~~   97 (99)
                      .+....  .+....++..|.+||
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~~PE  187 (302)
T cd07864         165 LYNSEESRPYTNKVITLWYRPPE  187 (302)
T ss_pred             cccCCcccccccceeccCccChH
Confidence            654322  112223445566665

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.34  E-value=4.9e-12  Score=78.89  Aligned_cols=87  Identities=29%  Similarity=0.391  Sum_probs=66.7

Q ss_pred             CeEEEEEeeCCCCchhhhcc-----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          8 QSCLVFPYSYGTKSGEQIST-----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~-----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ..+++|||+.+ ++.+.+..           ..++.|++.++.++|+.+++|+++++.|+++.   ....+++.|||.+.
T Consensus        80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~---~~~~~~l~dfg~~~  155 (287)
T cd07838          80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT---SDGQVKIADFGLAR  155 (287)
T ss_pred             eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEc---cCCCEEEeccCcce
Confidence            38999999975 77776543           12779999999999999999999999999995   44669999999988


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+..........++..|.+||.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~PE~  177 (287)
T cd07838         156 IYSFEMALTSVVVTLWYRAPEV  177 (287)
T ss_pred             eccCCcccccccccccccChHH
Confidence            7654433333445666777763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.34  E-value=4.9e-12  Score=78.95  Aligned_cols=89  Identities=25%  Similarity=0.404  Sum_probs=66.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      .+..++||||+.+ +|.+++...            .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||
T Consensus        70 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~---~~~~~~l~d~g  145 (284)
T cd07836          70 ENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN---KRGELKLADFG  145 (284)
T ss_pred             CCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCcEEEeecc
Confidence            3568999999985 777765431            2789999999999999999999999999994   45568999999


Q ss_pred             ceecCCCCC-Cccceeeccceecccc
Q psy14897         74 LAKNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      .+....... ......++..|.+||.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~y~~PE~  171 (284)
T cd07836         146 LARAFGIPVNTFSNEVVTLWYRAPDV  171 (284)
T ss_pred             hhhhhcCCccccccccccccccChHH
Confidence            987653321 1122345666777763

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.34  E-value=7.7e-12  Score=79.62  Aligned_cols=86  Identities=27%  Similarity=0.405  Sum_probs=64.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +...++||||+.+ ++.+.+..          ..++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        97 ~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~---~~~~~kl~dfg~~  172 (317)
T cd06635          97 EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSA  172 (317)
T ss_pred             CCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEEC---CCCCEEEecCCCc
Confidence            3567999999975 66665532          12678999999999999999999999999994   4556999999988


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .......   ...++..|.+||+
T Consensus       173 ~~~~~~~---~~~~~~~y~aPE~  192 (317)
T cd06635         173 SIASPAN---SFVGTPYWMAPEV  192 (317)
T ss_pred             cccCCcc---cccCCccccChhh
Confidence            7554322   2345556666663

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG2345|consensus

Probab=99.33  E-value=3.5e-12  Score=78.55  Aligned_cols=89  Identities=24%  Similarity=0.340  Sum_probs=68.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccch-------------HHHHHHHHHHHHhhCC--eeecCcCCCcEEEeeCCCCCeEEEee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK-------------EDREWIGRIDYIHSRN--FIHRDIKPDNFLMGLGKRGNLVYIID   71 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~-------------~~~~i~~~l~~lh~~~--i~h~~l~~~~~l~~~~~~~~~~~l~d   71 (99)
                      ...|++++|...|+|.+.+...+             ++.+++.|++++|+..  ..|+|++|.|++..   ......+.|
T Consensus        96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls---~~~~~vl~D  172 (302)
T KOG2345|consen   96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS---DSGLPVLMD  172 (302)
T ss_pred             eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec---CCCceEEEe
Confidence            46899999999999999876432             7899999999999998  99999999999994   456688999


Q ss_pred             ccceecCCCCCCc----------cceeeccceecccc
Q psy14897         72 FGLAKNVPSSPSY----------ERHVTTQTTRIGRI   98 (99)
Q Consensus        72 ~g~a~~~~~~~~~----------~~~~~t~~~~~~~~   98 (99)
                      ||.+....-.-..          .....|..|++||+
T Consensus       173 ~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPEL  209 (302)
T KOG2345|consen  173 LGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPEL  209 (302)
T ss_pred             ccCccccceEeechHHHHHHHHHHHHhCCCcccCchh
Confidence            9987654211000          00123677888886

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.32  E-value=4.4e-12  Score=81.07  Aligned_cols=68  Identities=18%  Similarity=0.276  Sum_probs=56.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.++++.+.++..           .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.+|+.
T Consensus        71 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~---~~~~~~~~~~~~  147 (328)
T cd08226          71 GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS---GDGLVSLSGLSH  147 (328)
T ss_pred             CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe---CCCcEEEechHH
Confidence            35679999999999999887642           2778999999999999999999999999995   445688888875


Q ss_pred             ee
Q psy14897         75 AK   76 (99)
Q Consensus        75 a~   76 (99)
                      +.
T Consensus       148 ~~  149 (328)
T cd08226         148 LY  149 (328)
T ss_pred             Hh
Confidence            43

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.31  E-value=9.4e-12  Score=77.66  Aligned_cols=72  Identities=19%  Similarity=0.301  Sum_probs=60.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEE
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVY   68 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~   68 (99)
                      +...++++||+.+|+|.+++...                 .++.|++.++.|||+++++|+|+++.|+++.   ....++
T Consensus        81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~---~~~~~k  157 (280)
T cd05043          81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID---EELQVK  157 (280)
T ss_pred             CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc---CCCcEE
Confidence            35688999999999998887531                 1678999999999999999999999999994   446689


Q ss_pred             EeeccceecCCC
Q psy14897         69 IIDFGLAKNVPS   80 (99)
Q Consensus        69 l~d~g~a~~~~~   80 (99)
                      +.|||+++.+..
T Consensus       158 l~d~g~~~~~~~  169 (280)
T cd05043         158 ITDNALSRDLFP  169 (280)
T ss_pred             ECCCCCcccccC
Confidence            999999987643

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.31  E-value=1.3e-11  Score=77.09  Aligned_cols=89  Identities=28%  Similarity=0.436  Sum_probs=67.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+. ++|.+++...           .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.
T Consensus        70 ~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~---~~~~~~l~df~~  145 (283)
T cd07835          70 ENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLID---REGALKLADFGL  145 (283)
T ss_pred             CCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc---CCCcEEEeeccc
Confidence            367899999995 5788776532           2778999999999999999999999999995   456699999999


Q ss_pred             eecCCCCC-Cccceeeccceecccc
Q psy14897         75 AKNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +..+.... ......++..|.+||.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~aPE~  170 (283)
T cd07835         146 ARAFGVPVRTYTHEVVTLWYRAPEI  170 (283)
T ss_pred             ccccCCCccccCccccccCCCCCce
Confidence            87653221 1122344566777763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.31  E-value=9.6e-12  Score=77.24  Aligned_cols=68  Identities=24%  Similarity=0.438  Sum_probs=56.9

Q ss_pred             eEEEEEeeCCCCchhhhcc---------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          9 SCLVFPYSYGTKSGEQIST---------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~l~~---------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      .++++||+.+|+|.+++..               ..++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||
T Consensus        82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~---~~~~~kl~dfg  158 (273)
T cd05074          82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN---ENMTVCVADFG  158 (273)
T ss_pred             eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEc---CCCCEEECccc
Confidence            4788999999998776521               22779999999999999999999999999994   45568999999


Q ss_pred             ceecCC
Q psy14897         74 LAKNVP   79 (99)
Q Consensus        74 ~a~~~~   79 (99)
                      +++.+.
T Consensus       159 ~~~~~~  164 (273)
T cd05074         159 LSKKIY  164 (273)
T ss_pred             cccccc
Confidence            988654

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.31  E-value=8.3e-12  Score=80.42  Aligned_cols=85  Identities=28%  Similarity=0.396  Sum_probs=64.7

Q ss_pred             CeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      ..+++++++ +++|.+.++.+        .++.|++.++.|+|+.+++|+++++.|+++.   ....+++.|||++....
T Consensus        96 ~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kl~dfg~~~~~~  171 (345)
T cd07877          96 DVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTD  171 (345)
T ss_pred             cEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEc---CCCCEEEeccccccccc
Confidence            467888876 66887765432        2778999999999999999999999999995   44569999999987653


Q ss_pred             CCCCccceeeccceecccc
Q psy14897         80 SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        80 ~~~~~~~~~~t~~~~~~~~   98 (99)
                      ..  .....++..|.+||.
T Consensus       172 ~~--~~~~~~~~~y~aPE~  188 (345)
T cd07877         172 DE--MTGYVATRWYRAPEI  188 (345)
T ss_pred             cc--ccccccCCCccCHHH
Confidence            32  223456677777773

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.31  E-value=7.8e-12  Score=80.44  Aligned_cols=85  Identities=28%  Similarity=0.380  Sum_probs=66.3

Q ss_pred             CeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      ..++|+||+ +++|.+.+...        .++.|++.++.++|+.+++|+++++.|+++.   ....+++.|||.+....
T Consensus        94 ~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~---~~~~~kL~dfg~~~~~~  169 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN---EDCELKILDFGLARHTD  169 (343)
T ss_pred             cEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEcccccccccc
Confidence            489999998 55888876542        2778999999999999999999999999994   45669999999988764


Q ss_pred             CCCCccceeeccceecccc
Q psy14897         80 SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        80 ~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...  ....++..|.+||.
T Consensus       170 ~~~--~~~~~~~~y~aPE~  186 (343)
T cd07851         170 DEM--TGYVATRWYRAPEI  186 (343)
T ss_pred             ccc--cCCcccccccCHHH
Confidence            332  22355667777763

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.30  E-value=1.1e-11  Score=78.49  Aligned_cols=85  Identities=27%  Similarity=0.367  Sum_probs=62.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+ ++.+.+..          ..++.|++.++.|+|+.+++|+++++.|+++.   ....+++.|||++
T Consensus        87 ~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~---~~~~~kL~dfg~~  162 (307)
T cd06607          87 EHTAWLVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT---EPGTVKLADFGSA  162 (307)
T ss_pred             CCeEEEEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEC---CCCCEEEeecCcc
Confidence            4568999999975 55554432          12778999999999999999999999999995   4456999999988


Q ss_pred             ecCCCCCCccceeeccceeccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGR   97 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~   97 (99)
                      .......   ...++..|.+||
T Consensus       163 ~~~~~~~---~~~~~~~y~aPE  181 (307)
T cd06607         163 SLVSPAN---SFVGTPYWMAPE  181 (307)
T ss_pred             eecCCCC---CccCCccccCce
Confidence            7654332   223455566665

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.30  E-value=1.2e-11  Score=78.06  Aligned_cols=88  Identities=27%  Similarity=0.435  Sum_probs=65.0

Q ss_pred             CCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ..+++||||+.+ ++.+.+..          ..++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||+++
T Consensus        88 ~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~  163 (311)
T cd07866          88 GSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILID---NQGILKIADFGLAR  163 (311)
T ss_pred             ceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECcCccch
Confidence            457999999876 55554432          22789999999999999999999999999994   45568999999987


Q ss_pred             cCCCCCC------------ccceeeccceecccc
Q psy14897         77 NVPSSPS------------YERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~------------~~~~~~t~~~~~~~~   98 (99)
                      .......            +....++..|.+||+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  197 (311)
T cd07866         164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPEL  197 (311)
T ss_pred             hccCCCcccccCCcccccccccceeccCcCChHH
Confidence            6543221            112245666778874

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.29  E-value=2.5e-11  Score=72.90  Aligned_cols=73  Identities=19%  Similarity=0.207  Sum_probs=60.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhc---cchHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQIS---TGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS   81 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~---~~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~   81 (99)
                      ....++||||+.++++.....   ...++.+++.++.++|..+++|+|++|.|+++.   ....+++.|||.+......
T Consensus       103 ~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~---~~~~~~liDfg~~~~~~~~  178 (198)
T cd05144         103 WNRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVD---DDEKIYIIDWPQMVSTDHP  178 (198)
T ss_pred             cCCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEc---CCCcEEEEECCccccCCCc
Confidence            456799999999998876654   223778999999999999999999999999994   4567899999998766543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.29  E-value=1.4e-11  Score=78.97  Aligned_cols=86  Identities=24%  Similarity=0.290  Sum_probs=64.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +...++||||+. ++|.+.++..        .++.|++.++.++|+.+++|+++++.|+++.   ....+++.|||.+..
T Consensus        82 ~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~---~~~~~~l~dfg~~~~  157 (328)
T cd07856          82 LEDIYFVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN---ENCDLKICDFGLARI  157 (328)
T ss_pred             CCcEEEEeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeEC---CCCCEEeCccccccc
Confidence            346899999984 5787776542        2678999999999999999999999999994   455699999999876


Q ss_pred             CCCCCCccceeeccceeccc
Q psy14897         78 VPSSPSYERHVTTQTTRIGR   97 (99)
Q Consensus        78 ~~~~~~~~~~~~t~~~~~~~   97 (99)
                      .....  ....++..|.+||
T Consensus       158 ~~~~~--~~~~~~~~y~aPE  175 (328)
T cd07856         158 QDPQM--TGYVSTRYYRAPE  175 (328)
T ss_pred             cCCCc--CCCcccccccCce
Confidence            53322  2234455566666

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.29  E-value=2e-11  Score=77.66  Aligned_cols=86  Identities=27%  Similarity=0.414  Sum_probs=64.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ....++||||+.+ ++.+.+...          .++.|++.++.|+|+++++|+++++.|+++.   ....+++.|||.+
T Consensus        93 ~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~---~~~~~kL~dfg~~  168 (313)
T cd06633          93 EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSA  168 (313)
T ss_pred             CCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC---CCCCEEEeecCCC
Confidence            3568999999964 666655321          2678999999999999999999999999994   4456999999987


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ......   ....++..|.+||+
T Consensus       169 ~~~~~~---~~~~~~~~y~aPE~  188 (313)
T cd06633         169 SKSSPA---NSFVGTPYWMAPEV  188 (313)
T ss_pred             cccCCC---CCccccccccChhh
Confidence            654322   22355666777764

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0200|consensus

Probab=99.29  E-value=1.3e-11  Score=84.88  Aligned_cols=76  Identities=21%  Similarity=0.356  Sum_probs=66.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch-------------------------HHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK-------------------------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~-------------------------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      ++.+++|+||+.+|+|.++++.++                         ++.||+.|+.||++..++|||+..+|+++. 
T Consensus       374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~-  452 (609)
T KOG0200|consen  374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLIT-  452 (609)
T ss_pred             CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEec-
Confidence            467899999999999999987544                         579999999999999999999999999994 


Q ss_pred             CCCCCeEEEeeccceecCCCCCCc
Q psy14897         61 GKRGNLVYIIDFGLAKNVPSSPSY   84 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~~~~~~~~   84 (99)
                        ....+|++|||+|+.......+
T Consensus       453 --~~~~~kIaDFGlar~~~~~~~y  474 (609)
T KOG0200|consen  453 --KNKVIKIADFGLARDHYNKDYY  474 (609)
T ss_pred             --CCCEEEEccccceeccCCCCce
Confidence              5577999999999976665544

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.29  E-value=1.2e-11  Score=77.92  Aligned_cols=88  Identities=19%  Similarity=0.324  Sum_probs=64.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      +...++||||+.+ .+.+.+..          ..++.|++.++.|+|+ .+++|+|+++.|+++.   ....+++.|||.
T Consensus        86 ~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~---~~~~~kL~dfg~  161 (296)
T cd06618          86 DSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLD---ASGNVKLCDFGI  161 (296)
T ss_pred             CCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEc---CCCCEEECcccc
Confidence            4568999999864 55544432          2378999999999997 6999999999999994   455699999999


Q ss_pred             eecCCCCCCccceeeccceeccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGR   97 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~   97 (99)
                      +..+..........++..|.+||
T Consensus       162 ~~~~~~~~~~~~~~~~~~y~aPE  184 (296)
T cd06618         162 SGRLVDSKAKTRSAGCAAYMAPE  184 (296)
T ss_pred             chhccCCCcccCCCCCccccCHh
Confidence            87665433333334455566665

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG4278|consensus

Probab=99.29  E-value=3e-12  Score=87.51  Aligned_cols=71  Identities=21%  Similarity=0.427  Sum_probs=62.0

Q ss_pred             CeEEEEEeeCCCCchhhhccch-----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          8 QSCLVFPYSYGTKSGEQISTGK-----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~~-----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+|+|.|||..|+|.++|++-.           .+.||.+++.||..+++||||+...||+++   ....+|++|||+++
T Consensus       337 PFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg---EnhiVKvADFGLsR  413 (1157)
T KOG4278|consen  337 PFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHIVKVADFGLSR  413 (1157)
T ss_pred             CeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc---ccceEEeeccchhh
Confidence            5799999999999999997521           579999999999999999999999999996   45669999999999


Q ss_pred             cCCCC
Q psy14897         77 NVPSS   81 (99)
Q Consensus        77 ~~~~~   81 (99)
                      .+...
T Consensus       414 lMtgD  418 (1157)
T KOG4278|consen  414 LMTGD  418 (1157)
T ss_pred             hhcCC
Confidence            76543

>KOG0670|consensus

Probab=99.29  E-value=7.8e-12  Score=83.77  Aligned_cols=89  Identities=22%  Similarity=0.329  Sum_probs=72.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      .+.+|||||-+.- +|.+.|+.            +.|+.|+..+|..|-.++++|.|++|.||++.  .....+|++|||
T Consensus       506 knHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN--E~k~iLKLCDfG  582 (752)
T KOG0670|consen  506 KNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN--ESKNILKLCDFG  582 (752)
T ss_pred             cceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec--cCcceeeeccCc
Confidence            3679999998765 67777653            23899999999999999999999999999985  556678999999


Q ss_pred             ceecCCCCCCccceeeccceecccc
Q psy14897         74 LAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .|....... .++-.++..|++|||
T Consensus       583 SA~~~~ene-itPYLVSRFYRaPEI  606 (752)
T KOG0670|consen  583 SASFASENE-ITPYLVSRFYRAPEI  606 (752)
T ss_pred             ccccccccc-ccHHHHHHhccCcce
Confidence            998765433 355677888999987

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.29  E-value=2.8e-11  Score=72.48  Aligned_cols=70  Identities=26%  Similarity=0.449  Sum_probs=60.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      ....++||||+.|++|.+.+...  .++.+++.++.++|+.+++|+|+++.|+++.    ...+++.|||.+....
T Consensus        69 ~~~~~lv~e~~~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~liDfg~a~~~~  140 (199)
T TIGR03724        69 PDNKTIVMEYIEGKPLKDVIEEGNDELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLYLIDFGLGKYSD  140 (199)
T ss_pred             CCCCEEEEEEECCccHHHHHhhcHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEEEEECCCCcCCC
Confidence            34568999999999999887665  5899999999999999999999999999984    4568999999887643

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.27  E-value=1.5e-11  Score=78.01  Aligned_cols=85  Identities=26%  Similarity=0.385  Sum_probs=63.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ....++||||+. |++.+.+..          ..++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+
T Consensus        87 ~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~  162 (308)
T cd06634          87 EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSA  162 (308)
T ss_pred             CCeeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC---CCCcEEECCcccc
Confidence            456899999997 566665532          12678999999999999999999999999994   4566999999988


Q ss_pred             ecCCCCCCccceeeccceeccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGR   97 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~   97 (99)
                      .......   ...++..|.+||
T Consensus       163 ~~~~~~~---~~~~~~~y~aPE  181 (308)
T cd06634         163 SIMAPAN---XFVGTPYWMAPE  181 (308)
T ss_pred             eeecCcc---cccCCccccCHH
Confidence            7654332   234555566665

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>smart00090 RIO RIO-like kinase

Probab=99.27  E-value=1.7e-11  Score=75.80  Aligned_cols=71  Identities=15%  Similarity=0.197  Sum_probs=57.6

Q ss_pred             CCeEEEEEeeCCCCchhhh-cc--------chHHHHHHHHHHHHhhCC-eeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQI-ST--------GKEDREWIGRIDYIHSRN-FIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l-~~--------~~~~~~i~~~l~~lh~~~-i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++||||+.++++.... ..        ..++.|++.++.++|..+ ++|+|++|.|+++.    ...+++.|||.+.
T Consensus       121 ~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~----~~~i~LiDFg~a~  196 (237)
T smart00090      121 RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH----DGKVVIIDVSQSV  196 (237)
T ss_pred             cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE----CCCEEEEEChhhh
Confidence            4568999999998876543 11        247899999999999999 99999999999994    3458999999988


Q ss_pred             cCCCC
Q psy14897         77 NVPSS   81 (99)
Q Consensus        77 ~~~~~   81 (99)
                      .....
T Consensus       197 ~~~~~  201 (237)
T smart00090      197 ELDHP  201 (237)
T ss_pred             ccCCc
Confidence            65443

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.27  E-value=1.9e-11  Score=74.01  Aligned_cols=89  Identities=27%  Similarity=0.446  Sum_probs=72.0

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ...+++|||+.+++|.+.+...         .++.+++.++.++|..+++|+++++.|+++.   ....+++.|||.+..
T Consensus        60 ~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~---~~~~~~l~d~~~~~~  136 (244)
T smart00220       60 DKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLD---EDGHVKLADFGLARQ  136 (244)
T ss_pred             CEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEEC---CCCcEEEccccceee
Confidence            5689999999999999887542         2778999999999999999999999999995   446689999999988


Q ss_pred             CCCCCCccceeeccceecccc
Q psy14897         78 VPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...........++..|.+||.
T Consensus       137 ~~~~~~~~~~~~~~~~~~pE~  157 (244)
T smart00220      137 LDPGGLLTTFVGTPEYMAPEV  157 (244)
T ss_pred             eccccccccccCCcCCCCHHH
Confidence            765443444556667777764

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.26  E-value=1e-11  Score=84.34  Aligned_cols=70  Identities=23%  Similarity=0.427  Sum_probs=60.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhc-cchHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQIS-TGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~-~~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      ....++||||+++++|.+.+. ...++.+++.++.++|+.+++|+|++|.|+++.    ...+++.|||+++...
T Consensus       408 ~~~~~lv~E~~~g~~L~~~l~~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~----~~~~~liDFGla~~~~  478 (535)
T PRK09605        408 PEEKTIVMEYIGGKDLKDVLEGNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR----DDRLYLIDFGLGKYSD  478 (535)
T ss_pred             CCCCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE----CCcEEEEeCcccccCC
Confidence            346789999999999999885 344889999999999999999999999999993    3458899999998653

>KOG1027|consensus

Probab=99.25  E-value=1.8e-11  Score=85.09  Aligned_cols=92  Identities=20%  Similarity=0.205  Sum_probs=69.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC--CCCCeEEEe
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG--KRGNLVYII   70 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~--~~~~~~~l~   70 (99)
                      +.-.|+..|.+.- +|.+.+..             .....|++.|+.+||+.+++|||++|.|+++..+  ....+++++
T Consensus       575 ~qF~YIalELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iS  653 (903)
T KOG1027|consen  575 RQFLYIALELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKIS  653 (903)
T ss_pred             CceEEEEehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEec
Confidence            3457888887765 66666654             2267899999999999999999999999999643  223578899


Q ss_pred             eccceecCCCCCCccce----eeccceecccc
Q psy14897         71 DFGLAKNVPSSPSYERH----VTTQTTRIGRI   98 (99)
Q Consensus        71 d~g~a~~~~~~~~~~~~----~~t~~~~~~~~   98 (99)
                      |||+|+.+..+.+...+    -||.++.+||+
T Consensus       654 DfglsKkl~~~~sS~~r~s~~sGt~GW~APE~  685 (903)
T KOG1027|consen  654 DFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQ  685 (903)
T ss_pred             ccccccccCCCcchhhcccCCCCcccccCHHH
Confidence            99999999776544333    46777778875

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.25  E-value=1.5e-11  Score=77.03  Aligned_cols=89  Identities=19%  Similarity=0.298  Sum_probs=64.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhc--------------cchHHHHHHHHHHHHhhC-CeeecCcCCCcEEEeeCCCCCeEEEe
Q psy14897          6 STQSCLVFPYSYGTKSGEQIS--------------TGKEDREWIGRIDYIHSR-NFIHRDIKPDNFLMGLGKRGNLVYII   70 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~--------------~~~~~~~i~~~l~~lh~~-~i~h~~l~~~~~l~~~~~~~~~~~l~   70 (99)
                      ++..+++|||+.. ++.+...              ...++.|++.++.|+|+. +++|+|+++.|+++.   ....+++.
T Consensus        75 ~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~~kl~  150 (288)
T cd06616          75 EGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD---RNGNIKLC  150 (288)
T ss_pred             CCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc---cCCcEEEe
Confidence            4568899999864 4433211              123778999999999974 999999999999994   45569999


Q ss_pred             eccceecCCCCCCccceeeccceecccc
Q psy14897         71 DFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        71 d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |||+++.+..........++..|.+||.
T Consensus       151 dfg~~~~~~~~~~~~~~~~~~~y~aPE~  178 (288)
T cd06616         151 DFGISGQLVDSIAKTRDAGCRPYMAPER  178 (288)
T ss_pred             ecchhHHhccCCccccccCccCccCHHH
Confidence            9999876654333333456666777763

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.22  E-value=6.6e-11  Score=71.41  Aligned_cols=70  Identities=29%  Similarity=0.485  Sum_probs=59.8

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccc-----hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTG-----KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~-----~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ..+..++||||++|++|.+.+...     .++.+++.++.++|..+++|+|+++.|+++.    ...+++.|||.+...
T Consensus        70 ~~~~~~lv~e~~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a~~~  144 (211)
T PRK14879         70 DPENFIIVMEYIEGEPLKDLINSNGMEELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLAEFS  144 (211)
T ss_pred             eCCCCEEEEEEeCCcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCcccCC
Confidence            345678999999999999887642     5788999999999999999999999999994    345889999988764

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.21  E-value=6.4e-11  Score=76.20  Aligned_cols=85  Identities=28%  Similarity=0.411  Sum_probs=64.0

Q ss_pred             CeEEEEEeeCCCCchhhhcc-------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCC
Q psy14897          8 QSCLVFPYSYGTKSGEQIST-------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS   80 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~-------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~   80 (99)
                      ..++|+||+.. ++.+....       ..++.|++.++.|+|+.+++|+++++.|+++.   ....+++.|||+++....
T Consensus        94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~---~~~~~kL~dfg~~~~~~~  169 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN---EDCELKILDFGLARHADA  169 (342)
T ss_pred             eEEEEeccccc-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCCCCcCCCC
Confidence            46899999875 66554331       22678999999999999999999999999994   456699999999876533


Q ss_pred             CCCccceeeccceecccc
Q psy14897         81 SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        81 ~~~~~~~~~t~~~~~~~~   98 (99)
                      ..  ....++..|.+||.
T Consensus       170 ~~--~~~~~~~~y~aPE~  185 (342)
T cd07879         170 EM--TGYVVTRWYRAPEV  185 (342)
T ss_pred             CC--CCceeeecccChhh
Confidence            22  23455667777774

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.21  E-value=8.2e-11  Score=72.82  Aligned_cols=68  Identities=15%  Similarity=0.195  Sum_probs=56.0

Q ss_pred             eEEEEEeeCC-CCchhhhccc----hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          9 SCLVFPYSYG-TKSGEQISTG----KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         9 ~~~v~e~~~~-g~l~~~l~~~----~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      .++||||+.+ .+|.+.+...    ....+++.++.++|+.|++|+|++|.|+++.   ....++++|||.+....
T Consensus       121 ~~lV~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~GI~HrDlkp~NILv~---~~~~v~LIDfg~~~~~~  193 (239)
T PRK01723        121 ADILIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFHDAGVYHADLNAHNILLD---PDGKFWLIDFDRGELRT  193 (239)
T ss_pred             eeEEEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCCCCCCCCCchhEEEc---CCCCEEEEECCCcccCC
Confidence            3599999997 5888776543    2568899999999999999999999999995   33468999999887644

>KOG1163|consensus

Probab=99.19  E-value=9.3e-11  Score=72.44  Aligned_cols=74  Identities=46%  Similarity=0.782  Sum_probs=59.9

Q ss_pred             CCeEEEEEeeCCCCchhhhc--cc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQIS--TG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~--~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ..-.+|||.+ |.+|.+...  ++        .++.|++..++|+|.++++|||++|+|++.+.......+.++|||+|+
T Consensus        84 ~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK  162 (341)
T KOG1163|consen   84 DYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK  162 (341)
T ss_pred             ccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchh
Confidence            3467999988 457776553  11        268999999999999999999999999999866667788999999999


Q ss_pred             cCCCC
Q psy14897         77 NVPSS   81 (99)
Q Consensus        77 ~~~~~   81 (99)
                      .+.+.
T Consensus       163 ky~d~  167 (341)
T KOG1163|consen  163 KYRDI  167 (341)
T ss_pred             hhccc
Confidence            87443

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.19  E-value=8.2e-11  Score=84.23  Aligned_cols=86  Identities=10%  Similarity=0.181  Sum_probs=61.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc------chHHHHHHHHHHHHh---hCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST------GKEDREWIGRIDYIH---SRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~------~~~~~~i~~~l~~lh---~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+++|+|.++++.      .+++.|++.|+.|+|   +.+++|+|+++.|+++.   .....++. ++.+.
T Consensus       755 ~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~---~~~~~~~~-~~~~~  830 (968)
T PLN00113        755 EKGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID---GKDEPHLR-LSLPG  830 (968)
T ss_pred             CCCCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEEC---CCCceEEE-ecccc
Confidence            3568999999999999998854      337899999999999   66999999999999984   22223332 44443


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .....   ....+|..|.+||+
T Consensus       831 ~~~~~---~~~~~t~~y~aPE~  849 (968)
T PLN00113        831 LLCTD---TKCFISSAYVAPET  849 (968)
T ss_pred             ccccC---CCccccccccCccc
Confidence            32211   12356777888875

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.17  E-value=1.8e-10  Score=70.83  Aligned_cols=69  Identities=14%  Similarity=0.274  Sum_probs=57.0

Q ss_pred             CCeEEEEEeeCCCCchhhhcc-chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST-GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~-~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      +..++||||++|.+|.+.... .....++..++..+|..+++|+|++|.|+++.   ... +++.|||......
T Consensus       116 ~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~---~~g-i~liDfg~~~~~~  185 (232)
T PRK10359        116 HTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLHQHGMVSGDPHKGNFIVS---KNG-LRIIDLSGKRCTA  185 (232)
T ss_pred             CCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHHHcCCccCCCChHHEEEe---CCC-EEEEECCCccccc
Confidence            468899999999999776432 23567899999999999999999999999994   334 8999999877653

>KOG0576|consensus

Probab=99.17  E-value=2.9e-11  Score=82.70  Aligned_cols=92  Identities=24%  Similarity=0.339  Sum_probs=75.1

Q ss_pred             CCCCeEEEEEeeCCCCchhhh------c---cchHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQI------S---TGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l------~---~~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +++.+|+.|||+.+|+|.+.-      +   ....+++.+.+++|+|+.+=+|||++-.|+++.   ....++++|||.+
T Consensus        83 r~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt---d~gDvklaDfgvs  159 (829)
T KOG0576|consen   83 RRDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT---DEGDVKLADFGVS  159 (829)
T ss_pred             hhcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeec---ccCceeecccCch
Confidence            457899999999999998852      2   233679999999999999999999999999994   5566999999998


Q ss_pred             ecCCCC-CCccceeeccceeccccC
Q psy14897         76 KNVPSS-PSYERHVTTQTTRIGRID   99 (99)
Q Consensus        76 ~~~~~~-~~~~~~~~t~~~~~~~~~   99 (99)
                      ..+... .+...+.||.-+.+||.|
T Consensus       160 aqitati~KrksfiGtpywmapEva  184 (829)
T KOG0576|consen  160 AQITATIAKRKSFIGTPYWMAPEVA  184 (829)
T ss_pred             hhhhhhhhhhhcccCCccccchhHH
Confidence            776543 455678899888888864

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.16  E-value=2.3e-10  Score=68.79  Aligned_cols=89  Identities=27%  Similarity=0.399  Sum_probs=69.8

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++++||+.+++|.+++...          .++.+++.++.++|.+++.|+++++.|+++.   ....+++.|||.+.
T Consensus        70 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~---~~~~~~l~d~g~~~  146 (225)
T smart00221       70 EPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLG---MDGLVKLADFGLAR  146 (225)
T ss_pred             CceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeeCceee
Confidence            5689999999999998887542          2678899999999999999999999999995   34668999999988


Q ss_pred             cCCCCC--Cccceeeccceecccc
Q psy14897         77 NVPSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      ......  ......++..|.+||.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~pe~  170 (225)
T smart00221      147 FIHRDLAALLKTVKGTPFYLAPEV  170 (225)
T ss_pred             EecCcccccccceeccCCcCCHhH
Confidence            765442  2233455666666663

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.16  E-value=2.5e-10  Score=67.47  Aligned_cols=72  Identities=31%  Similarity=0.545  Sum_probs=61.6

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCC-CCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKR-GNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~-~~~~~l~d~g~a   75 (99)
                      ...+++|||+.+++|.+++...          .++.+++.++.++|+.+++|+|+++.|+++.   . ...+++.||+.+
T Consensus        64 ~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~---~~~~~~~l~d~~~~  140 (215)
T cd00180          64 NHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLD---SDNGKVKLADFGLS  140 (215)
T ss_pred             CeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEe---CCCCcEEEecCCce
Confidence            4689999999999999988654          2778999999999999999999999999995   3 466899999998


Q ss_pred             ecCCCC
Q psy14897         76 KNVPSS   81 (99)
Q Consensus        76 ~~~~~~   81 (99)
                      ......
T Consensus       141 ~~~~~~  146 (215)
T cd00180         141 KLLTSD  146 (215)
T ss_pred             EEccCC
Confidence            876543

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0199|consensus

Probab=99.16  E-value=1.5e-11  Score=84.74  Aligned_cols=73  Identities=21%  Similarity=0.365  Sum_probs=64.3

Q ss_pred             CCeEEEEEeeCCCCchhhhcc-c----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST-G----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~-~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ....||||....|+|.+.|++ .          .|+.||+.++.||.+++++|||+...|+++.   ....+|++|||+.
T Consensus       183 qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla---sprtVKI~DFGLm  259 (1039)
T KOG0199|consen  183 QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA---SPRTVKICDFGLM  259 (1039)
T ss_pred             chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec---ccceeeeecccce
Confidence            457899999999999999986 2          2889999999999999999999999999994   5677999999999


Q ss_pred             ecCCCCC
Q psy14897         76 KNVPSSP   82 (99)
Q Consensus        76 ~~~~~~~   82 (99)
                      +.+....
T Consensus       260 RaLg~ne  266 (1039)
T KOG0199|consen  260 RALGENE  266 (1039)
T ss_pred             eccCCCC
Confidence            9886554

>KOG1167|consensus

Probab=99.11  E-value=1.4e-10  Score=75.49  Aligned_cols=70  Identities=30%  Similarity=0.514  Sum_probs=59.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +++..+|+||+++.+..++...      +.+++.+..++.++|.+||+|||+||.|++..  .....-.+.|||+|..
T Consensus       107 nd~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n--~~t~rg~LvDFgLA~~  182 (418)
T KOG1167|consen  107 NDQVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYN--RRTQRGVLVDFGLAQR  182 (418)
T ss_pred             CCeeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccc--cccCCceEEechhHHH
Confidence            3678999999999887777654      34789999999999999999999999999985  5566677999999874

>PRK10345 hypothetical protein; Provisional

Probab=99.07  E-value=5.4e-10  Score=68.01  Aligned_cols=68  Identities=12%  Similarity=0.167  Sum_probs=51.2

Q ss_pred             EEEEe--eCCCCchhhhccch------HHHHHHHHH-HHHhhCCeeecCcCCCcEEEeeCC-CCCeEEEeeccceecC
Q psy14897         11 LVFPY--SYGTKSGEQISTGK------EDREWIGRI-DYIHSRNFIHRDIKPDNFLMGLGK-RGNLVYIIDFGLAKNV   78 (99)
Q Consensus        11 ~v~e~--~~~g~l~~~l~~~~------~~~~i~~~l-~~lh~~~i~h~~l~~~~~l~~~~~-~~~~~~l~d~g~a~~~   78 (99)
                      +|+||  ..+|+|.++++...      ++.|++.++ .|||+++++|+|++|.|+++.... ....+++.|++-+..+
T Consensus        82 ~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~  159 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF  159 (210)
T ss_pred             EEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence            78999  44789999986432      356777777 899999999999999999996322 2336899994444333

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.07  E-value=6.8e-10  Score=65.85  Aligned_cols=70  Identities=19%  Similarity=0.263  Sum_probs=56.0

Q ss_pred             CCeEEEEEeeCCC-----Cchhhhc---cchHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGT-----KSGEQIS---TGKEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g-----~l~~~l~---~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ...++||||+.++     .+.+...   ...++.+++.++.++|. .+++|+|++|.|+++.    ...+++.|||.+..
T Consensus        88 ~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~----~~~~~liDfg~a~~  163 (187)
T cd05119          88 NRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD----DGKVYIIDVPQAVE  163 (187)
T ss_pred             CCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE----CCcEEEEECccccc
Confidence            4578999999994     3333322   23478999999999999 9999999999999994    45589999999986


Q ss_pred             CCC
Q psy14897         78 VPS   80 (99)
Q Consensus        78 ~~~   80 (99)
                      ...
T Consensus       164 ~~~  166 (187)
T cd05119         164 IDH  166 (187)
T ss_pred             ccC
Confidence            654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1164|consensus

Probab=99.07  E-value=7.2e-10  Score=71.16  Aligned_cols=69  Identities=30%  Similarity=0.598  Sum_probs=54.3

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCC--CCCeEEEeecc
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGK--RGNLVYIIDFG   73 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~--~~~~~~l~d~g   73 (99)
                      ...++||+.+ |.+|.+..+..           .++.|++.+|.++|+.|++|||++|.|+.++...  ....+.+.|||
T Consensus        94 ~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG  172 (322)
T KOG1164|consen   94 DFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFG  172 (322)
T ss_pred             ceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence            3468888877 44777755321           2788999999999999999999999999997432  12568999999


Q ss_pred             cee
Q psy14897         74 LAK   76 (99)
Q Consensus        74 ~a~   76 (99)
                      +++
T Consensus       173 lar  175 (322)
T KOG1164|consen  173 LAR  175 (322)
T ss_pred             CCc
Confidence            999

>KOG1006|consensus

Probab=99.06  E-value=2.2e-11  Score=76.01  Aligned_cols=90  Identities=19%  Similarity=0.291  Sum_probs=66.5

Q ss_pred             CCCCCeEEEEEeeCCCCchhhhc------cchHHHH--------HHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEE
Q psy14897          4 FRSTQSCLVFPYSYGTKSGEQIS------TGKEDRE--------WIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVY   68 (99)
Q Consensus         4 ~~~~~~~~v~e~~~~g~l~~~l~------~~~~~~~--------i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~   68 (99)
                      |+++..|+.||.|+- +++.+-+      ...+..+        .+.+|.||-. ..++|||++|+||+++   ..+.+|
T Consensus       133 F~EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILld---r~G~vK  208 (361)
T KOG1006|consen  133 FSEGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLD---RHGDVK  208 (361)
T ss_pred             hcCCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEe---cCCCEe
Confidence            677889999999975 5544322      1222233        4567888885 5899999999999994   667799


Q ss_pred             EeeccceecCCCCCCccceeeccceeccc
Q psy14897         69 IIDFGLAKNVPSSPSYERHVTTQTTRIGR   97 (99)
Q Consensus        69 l~d~g~a~~~~~~~~~~~~~~t~~~~~~~   97 (99)
                      +.|||.+..+...-..+...|.+.|.+||
T Consensus       209 LCDFGIcGqLv~SiAkT~daGCrpYmAPE  237 (361)
T KOG1006|consen  209 LCDFGICGQLVDSIAKTVDAGCRPYMAPE  237 (361)
T ss_pred             eecccchHhHHHHHHhhhccCCccccChh
Confidence            99999998876665556667778888776

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.04  E-value=1.3e-09  Score=67.78  Aligned_cols=87  Identities=32%  Similarity=0.481  Sum_probs=69.6

Q ss_pred             eEEEEEeeCCCCchhhhccc------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCC-eEEEeeccce
Q psy14897          9 SCLVFPYSYGTKSGEQISTG------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGN-LVYIIDFGLA   75 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~l~~~------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~-~~~l~d~g~a   75 (99)
                      .+++++|+.++++.+.+...            .+..|++.++.++|+.+++|+|+++.|+++.   ... .+++.|||.+
T Consensus        73 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~---~~~~~~~l~dfg~~  149 (384)
T COG0515          73 LYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLD---RDGRVVKLIDFGLA  149 (384)
T ss_pred             EEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec---CCCCeEEEeccCcc
Confidence            68999999999998666532            1678999999999999999999999999984   333 6899999998


Q ss_pred             ecCCCCC-------Cccceeeccceecccc
Q psy14897         76 KNVPSSP-------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-------~~~~~~~t~~~~~~~~   98 (99)
                      +.+....       .....+++.+|.+|+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~  179 (384)
T COG0515         150 KLLPDPGSTSSIPALPSTSVGTPGYMAPEV  179 (384)
T ss_pred             eecCCCCccccccccccccccccccCCHHH
Confidence            8665433       2355678888888874

>KOG0590|consensus

Probab=99.03  E-value=5.1e-10  Score=77.03  Aligned_cols=84  Identities=21%  Similarity=0.269  Sum_probs=67.1

Q ss_pred             EEEEeeCCCCchhhhccc-h--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCC
Q psy14897         11 LVFPYSYGTKSGEQISTG-K--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS   81 (99)
Q Consensus        11 ~v~e~~~~g~l~~~l~~~-~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~   81 (99)
                      -+|||+.. ||++.+... .        ++.|++.|+.|+|+.|+.|+|++++|+++.   ....+++.|||.+..+.-.
T Consensus       398 ~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~---~~g~lki~Dfg~~~vf~~~  473 (601)
T KOG0590|consen  398 QSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT---ENGILKIIDFGAASVFRYP  473 (601)
T ss_pred             hhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe---cCCceEEeecCcceeeccC
Confidence            34999999 999988764 2        789999999999999999999999999994   4557999999998876322


Q ss_pred             C-----Cccceeeccceecccc
Q psy14897         82 P-----SYERHVTTQTTRIGRI   98 (99)
Q Consensus        82 ~-----~~~~~~~t~~~~~~~~   98 (99)
                      .     .....+|+..|.+||.
T Consensus       474 ~e~~~~~~~g~~gS~pY~apE~  495 (601)
T KOG0590|consen  474 WEKNIHESSGIVGSDPYLAPEV  495 (601)
T ss_pred             cchhhhhhcCcccCCcCcCccc
Confidence            1     2244577778887774

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.01  E-value=1.7e-09  Score=64.43  Aligned_cols=72  Identities=22%  Similarity=0.404  Sum_probs=59.5

Q ss_pred             CCCCCCeEEEEEeeCCCCchhhhccc--hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          3 PFRSTQSCLVFPYSYGTKSGEQISTG--KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         3 ~~~~~~~~~v~e~~~~g~l~~~l~~~--~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ++....-.++|||++|..|.+.+...  .+++.+=.-+.-||..+++|.|+.++|+.+.    +..+.+.|||++..-
T Consensus        68 dvD~~~~~I~me~I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~----~~~i~~IDfGLg~~s  141 (204)
T COG3642          68 DVDPDNGLIVMEYIEGELLKDALEEARPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS----GGRIYFIDFGLGEFS  141 (204)
T ss_pred             EEcCCCCEEEEEEeCChhHHHHHHhcchHHHHHHHHHHHHHHhcCeecCCCccceEEEe----CCcEEEEECCccccc
Confidence            44556778999999998888888776  5777777778889999999999999999983    334889999998753

>KOG0983|consensus

Probab=99.00  E-value=7.9e-10  Score=69.49  Aligned_cols=64  Identities=22%  Similarity=0.393  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCCCCccceeeccceeccc
Q psy14897         31 DREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGR   97 (99)
Q Consensus        31 ~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~~~~~~~t~~~~~~~   97 (99)
                      --.++.++.||-+ ++++|||++|.||+++   ....+|+.|||.+..+.+....+...|...|.+||
T Consensus       197 tva~v~AL~YLKeKH~viHRDvKPSNILlD---e~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPE  261 (391)
T KOG0983|consen  197 TVAIVKALYYLKEKHGVIHRDVKPSNILLD---ERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPE  261 (391)
T ss_pred             HHHHHHHHHHHHHhcceeecccCccceEEc---cCCCEEeecccccceeecccccccccCCccccCcc
Confidence            3457778899885 6899999999999995   56679999999999988887777788888888886

>KOG1025|consensus

Probab=98.98  E-value=2.3e-10  Score=80.21  Aligned_cols=73  Identities=23%  Similarity=0.253  Sum_probs=63.9

Q ss_pred             CCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +.+.+|++|+..|.|.++.+.++          |+.||+.|+.|||.++++|||+..+|+++.   ....+|+.|||+++
T Consensus       770 s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVk---sP~hvkitdfgla~  846 (1177)
T KOG1025|consen  770 STLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVK---SPNHVKITDFGLAK  846 (1177)
T ss_pred             chHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeec---CCCeEEEEecchhh
Confidence            34778999999999999998655          899999999999999999999999999994   55669999999999


Q ss_pred             cCCCCC
Q psy14897         77 NVPSSP   82 (99)
Q Consensus        77 ~~~~~~   82 (99)
                      .+.+..
T Consensus       847 ll~~d~  852 (1177)
T KOG1025|consen  847 LLAPDE  852 (1177)
T ss_pred             ccCccc
Confidence            876543

>KOG1290|consensus

Probab=98.86  E-value=2.5e-09  Score=71.29  Aligned_cols=52  Identities=29%  Similarity=0.480  Sum_probs=44.8

Q ss_pred             CCeEEEEEeeCCCCchhhhcc-----------chHHHHHHHHHHHHhh-CCeeecCcCCCcEEEe
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST-----------GKEDREWIGRIDYIHS-RNFIHRDIKPDNFLMG   59 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~-----------~~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~   59 (99)
                      ..+|||||++.. +|..+++.           +.+++|++.||.|||+ ++|||.|+||+|+++.
T Consensus       159 ~HVCMVfEvLGd-nLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  159 QHVCMVFEVLGD-NLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC  222 (590)
T ss_pred             cEEEEEehhhhh-HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence            468999999965 78887764           2389999999999996 6999999999999986

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.80  E-value=3e-08  Score=66.26  Aligned_cols=71  Identities=14%  Similarity=0.321  Sum_probs=55.3

Q ss_pred             CCeEEEEEeeCCCCchhhhcc-------chHHHHHHH-HHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST-------GKEDREWIG-RIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~-------~~~~~~i~~-~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      +..++||||++|+++.+....       ..++.+++. .+..+|..|++|+|++|.|+++.   ....+++.|||.+..+
T Consensus       231 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~---~~g~i~liDfG~~~~l  307 (437)
T TIGR01982       231 SERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHADLHPGNIFVL---KDGKIIALDFGIVGRL  307 (437)
T ss_pred             CCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCCCCcccEEEC---CCCcEEEEeCCCeeEC
Confidence            356899999999998876532       124555544 45678999999999999999994   4556899999999877


Q ss_pred             CC
Q psy14897         79 PS   80 (99)
Q Consensus        79 ~~   80 (99)
                      .+
T Consensus       308 ~~  309 (437)
T TIGR01982       308 SE  309 (437)
T ss_pred             CH
Confidence            54

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1166|consensus

Probab=98.79  E-value=3e-08  Score=71.03  Aligned_cols=72  Identities=33%  Similarity=0.470  Sum_probs=60.5

Q ss_pred             CCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEee----CCCCCeEEEeecc
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGL----GKRGNLVYIIDFG   73 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~----~~~~~~~~l~d~g   73 (99)
                      +..++|+||..-|+|.+.+...+         +..|++.-+..+|+.+|||.|+||.|+++..    ......++++|||
T Consensus       767 ~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG  846 (974)
T KOG1166|consen  767 NASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFG  846 (974)
T ss_pred             CcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecc
Confidence            56789999999999999998655         5689999999999999999999999999852    1123468999999


Q ss_pred             ceecC
Q psy14897         74 LAKNV   78 (99)
Q Consensus        74 ~a~~~   78 (99)
                      .+--+
T Consensus       847 ~siDm  851 (974)
T KOG1166|consen  847 RSIDM  851 (974)
T ss_pred             cceee
Confidence            88654

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.76  E-value=4.5e-08  Score=55.37  Aligned_cols=69  Identities=22%  Similarity=0.291  Sum_probs=55.3

Q ss_pred             CCeEEEEEeeCCCCchhh--hccchHHHHHHHHHHHHhhC---CeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQ--ISTGKEDREWIGRIDYIHSR---NFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~--l~~~~~~~~i~~~l~~lh~~---~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      +..+++|||+.++.+...  .....+..+++.++..+|..   +++|+|+++.|+++.   ....+++.||+.+...
T Consensus        66 ~~~~~v~e~~~g~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~---~~~~~~l~Df~~~~~~  139 (155)
T cd05120          66 GWSYLLMEWIEGETLDEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD---DGKILGIIDWEYAGYG  139 (155)
T ss_pred             CccEEEEEecCCeecccCCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE---CCcEEEEEecccccCC
Confidence            468999999999877643  22334678899999999984   699999999999995   3567899999988753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1165|consensus

Probab=98.76  E-value=2.2e-08  Score=64.53  Aligned_cols=73  Identities=37%  Similarity=0.635  Sum_probs=56.3

Q ss_pred             eEEEEEeeCCCCchhhhc--c--------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCC--CCCeEEEeecccee
Q psy14897          9 SCLVFPYSYGTKSGEQIS--T--------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGK--RGNLVYIIDFGLAK   76 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~l~--~--------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~--~~~~~~l~d~g~a~   76 (99)
                      --||+|.+ |.+|++...  .        -.++.|++..+.++|++.+|.||++|+|++++...  ....+.+.|||+|+
T Consensus        99 NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK  177 (449)
T KOG1165|consen   99 NILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK  177 (449)
T ss_pred             hhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence            45778877 446666543  1        12789999999999999999999999999997432  24468899999999


Q ss_pred             cCCCCC
Q psy14897         77 NVPSSP   82 (99)
Q Consensus        77 ~~~~~~   82 (99)
                      .+.++.
T Consensus       178 ~YrDp~  183 (449)
T KOG1165|consen  178 EYRDPK  183 (449)
T ss_pred             hhcCcc
Confidence            886553

>KOG0603|consensus

Probab=98.74  E-value=1.2e-09  Score=74.12  Aligned_cols=88  Identities=22%  Similarity=0.206  Sum_probs=74.3

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+++++++++|..+|+++..+....         +...++.++..+|+.+++++++|++|+++.   ..+.+++.|||++
T Consensus        68 t~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld---~~Ghi~~tdfgls  144 (612)
T KOG0603|consen   68 TDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLL---LEGHIKLTDFGLS  144 (612)
T ss_pred             cccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeec---ccCccccCCchhh
Confidence            4578899999999999999886543         567788999999999999999999999994   5566899999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +........   |||..|++|||
T Consensus       145 ke~v~~~~~---cgt~eymApEI  164 (612)
T KOG0603|consen  145 KEAVKEKIA---CGTYEYRAPEI  164 (612)
T ss_pred             hHhHhhhhc---ccchhhhhhHh
Confidence            987666433   99999999886

>KOG4158|consensus

Probab=98.73  E-value=3.6e-08  Score=64.99  Aligned_cols=70  Identities=23%  Similarity=0.272  Sum_probs=55.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC-CCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG-KRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~-~~~~~~~l~d~g~a~   76 (99)
                      ...+|+||.-+.. +|..++..+        -+..|++.++.+||.+++.|||+|..|+++..+ +....+.++|||.|-
T Consensus       315 ~~tlylvMkrY~~-tLr~yl~~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL  393 (598)
T KOG4158|consen  315 PKTLYLVMKRYRQ-TLREYLWTRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL  393 (598)
T ss_pred             CceEEEehhcchh-hHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence            3568999987776 666666432        267999999999999999999999999998633 334567899999864

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.72  E-value=5.2e-08  Score=58.80  Aligned_cols=70  Identities=14%  Similarity=0.233  Sum_probs=52.6

Q ss_pred             CCCeEEEEEeeCCCCchh-hhcc--------chHHHHHHHHHHHH-hhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGE-QIST--------GKEDREWIGRIDYI-HSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~-~l~~--------~~~~~~i~~~l~~l-h~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      -..-++||||+.++.+.. .++.        ..+..+++..+..+ |..+++|.|+++.|+++.    ...+.+.|||.+
T Consensus        96 ~~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~----~~~v~iIDF~qa  171 (197)
T cd05146          96 LKKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH----DGKVWFIDVSQS  171 (197)
T ss_pred             ecCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE----CCcEEEEECCCc
Confidence            356789999998753321 1211        23567889999888 899999999999999994    245899999988


Q ss_pred             ecCC
Q psy14897         76 KNVP   79 (99)
Q Consensus        76 ~~~~   79 (99)
                      -...
T Consensus       172 v~~~  175 (197)
T cd05146         172 VEPT  175 (197)
T ss_pred             eeCC
Confidence            7664

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.70  E-value=7.1e-08  Score=56.23  Aligned_cols=67  Identities=21%  Similarity=0.359  Sum_probs=53.3

Q ss_pred             CCeEEEEEeeCCCCchhh-hccchHHHHHHHHHHHHhhCCe-----eecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQ-ISTGKEDREWIGRIDYIHSRNF-----IHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~-l~~~~~~~~i~~~l~~lh~~~i-----~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ...++||||++|.++... ........++...+..+|+.++     +|+|+++.|+++.    ...+++.||+.+..
T Consensus        64 ~~~~lv~e~i~G~~l~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~~~liDf~~a~~  136 (170)
T cd05151          64 ETGVLITEFIEGSELLTEDFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGRLWLIDWEYAGM  136 (170)
T ss_pred             CCCeEEEEecCCCccccccccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCeEEEEecccccC
Confidence            346899999999887653 1223467889999999999874     9999999999984    34588999998874

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1033|consensus

Probab=98.61  E-value=3.5e-09  Score=70.81  Aligned_cols=85  Identities=19%  Similarity=0.259  Sum_probs=69.8

Q ss_pred             CeEEEEEeeCCCCchhhhccch------------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          8 QSCLVFPYSYGTKSGEQISTGK------------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~~------------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+++.|+++.-..|.+++..++            ++.|+..++.|   ++.+|+|+++.|++..   ....+++.|||+.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~---~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS---DDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccc---cchhhhhhhhhhe
Confidence            4789999999999999996432            77888889988   9999999999999984   4446899999987


Q ss_pred             ecCCCCC-------Cccceeeccceecccc
Q psy14897         76 KNVPSSP-------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-------~~~~~~~t~~~~~~~~   98 (99)
                      ......+       ..+..++|+||..||.
T Consensus       404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQ  433 (516)
T KOG1033|consen  404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQ  433 (516)
T ss_pred             eecccCCcccchhhhhhhcccccccCCHHH
Confidence            7665554       5567789999999974

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.58  E-value=1.6e-07  Score=55.00  Aligned_cols=54  Identities=11%  Similarity=0.077  Sum_probs=41.9

Q ss_pred             HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCCCCccceeeccceecccc
Q psy14897         30 EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        30 ~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ++.|++.|+.|+|+.+      ++.|+++.   ....+++  ||.+.......    ..+|..|.+||+
T Consensus        22 i~~qi~~~L~~lH~~~------kp~Nil~~---~~~~~~~--fG~~~~~~~~~----~~g~~~y~aPE~   75 (176)
T smart00750       22 VCLQCLRALRELHRQA------KSGNILLT---WDGLLKL--DGSVAFKTPEQ----SRVDPYFMAPEV   75 (176)
T ss_pred             HHHHHHHHHHHHHhcC------CcccEeEc---Cccceee--ccceEeecccc----CCCcccccChHH
Confidence            7899999999999998      89999984   4445666  99887654332    257788888885

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.52  E-value=6.2e-07  Score=54.43  Aligned_cols=72  Identities=21%  Similarity=0.287  Sum_probs=57.4

Q ss_pred             CeEEEEEeeCCC-Cchhhhcc---------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          8 QSCLVFPYSYGT-KSGEQIST---------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         8 ~~~~v~e~~~~g-~l~~~l~~---------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ..++|+|++++. +|.+.+..         ..++.++...+.-||..|++|.|+.+.|+++........+.++||..++.
T Consensus        91 ~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen   91 RSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             eEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            458999999985 68877764         23778888899999999999999999999996333234688999998776


Q ss_pred             CC
Q psy14897         78 VP   79 (99)
Q Consensus        78 ~~   79 (99)
                      ..
T Consensus       171 ~~  172 (206)
T PF06293_consen  171 RP  172 (206)
T ss_pred             CC
Confidence            43

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG1024|consensus

Probab=98.51  E-value=3.1e-07  Score=60.49  Aligned_cols=76  Identities=13%  Similarity=0.182  Sum_probs=64.2

Q ss_pred             CCCCeEEEEEeeCCCCchhhhcc-----c------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeE
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQIST-----G------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLV   67 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~-----~------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~   67 (99)
                      .....++++.++..|+|..+++.     -            ..+.|+..++.++|..+++|+|+..+|++++   ....+
T Consensus       359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvId---d~LqV  435 (563)
T KOG1024|consen  359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVID---DQLQV  435 (563)
T ss_pred             ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceeh---hheeE
Confidence            34678899999999999999971     0            1679999999999999999999999999994   55779


Q ss_pred             EEeeccceecCCCCCC
Q psy14897         68 YIIDFGLAKNVPSSPS   83 (99)
Q Consensus        68 ~l~d~g~a~~~~~~~~   83 (99)
                      |+.|-.+++.+-+...
T Consensus       436 kltDsaLSRDLFP~DY  451 (563)
T KOG1024|consen  436 KLTDSALSRDLFPGDY  451 (563)
T ss_pred             EeccchhccccCcccc
Confidence            9999999998765543

>KOG3087|consensus

Probab=98.48  E-value=6.2e-07  Score=53.84  Aligned_cols=72  Identities=21%  Similarity=0.295  Sum_probs=53.4

Q ss_pred             CCCeEEEEEeeCCC-Cchhhhcc-----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          6 STQSCLVFPYSYGT-KSGEQIST-----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         6 ~~~~~~v~e~~~~g-~l~~~l~~-----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      ...-.++|||++|. .+.+++..           ..+++.+=..+.-||.+.++|.|+..+|+++..+.......+.|||
T Consensus        82 ~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfg  161 (229)
T KOG3087|consen   82 TYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFG  161 (229)
T ss_pred             cCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeec
Confidence            45668999999873 45555532           1266777777889999999999999999998633344445799999


Q ss_pred             ceec
Q psy14897         74 LAKN   77 (99)
Q Consensus        74 ~a~~   77 (99)
                      ++..
T Consensus       162 ls~~  165 (229)
T KOG3087|consen  162 LSSV  165 (229)
T ss_pred             chhc
Confidence            9864

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.47  E-value=1e-06  Score=55.56  Aligned_cols=70  Identities=17%  Similarity=0.108  Sum_probs=55.1

Q ss_pred             CeEEEEEeeCCC-Cchhhhcc-----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC----CCCCeEEEee
Q psy14897          8 QSCLVFPYSYGT-KSGEQIST-----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG----KRGNLVYIID   71 (99)
Q Consensus         8 ~~~~v~e~~~~g-~l~~~l~~-----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~----~~~~~~~l~d   71 (99)
                      ..++|+|++.+. +|.+++..           ..++.++...+.-||..|++|+|+.+.|+++...    .....+.++|
T Consensus       109 ~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LID  188 (268)
T PRK15123        109 TSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVID  188 (268)
T ss_pred             eeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEE
Confidence            478999999986 67776531           1367788889999999999999999999999521    1245688999


Q ss_pred             ccceec
Q psy14897         72 FGLAKN   77 (99)
Q Consensus        72 ~g~a~~   77 (99)
                      |+.++.
T Consensus       189 l~r~~~  194 (268)
T PRK15123        189 LHRAQI  194 (268)
T ss_pred             CCcccc
Confidence            998854

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.42  E-value=8.2e-07  Score=53.33  Aligned_cols=69  Identities=28%  Similarity=0.401  Sum_probs=45.4

Q ss_pred             CCeEEEEEeeC--CCCchhhhcc-------chHHHHHHHHHHH-HhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSY--GTKSGEQIST-------GKEDREWIGRIDY-IHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~--~g~l~~~l~~-------~~~~~~i~~~l~~-lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +.-.+||||+.  |..+......       ..++.+++..+.. +|..+++|.|+.+.|+++.   .+ .+.+.|||.+.
T Consensus        79 ~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~---~~-~~~iIDf~qav  154 (188)
T PF01163_consen   79 NRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD---DG-KVYIIDFGQAV  154 (188)
T ss_dssp             ETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE---TT-CEEE--GTTEE
T ss_pred             eCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee---cc-eEEEEecCcce
Confidence            45689999999  5444332222       2266777775554 6799999999999999995   32 68999999887


Q ss_pred             cCC
Q psy14897         77 NVP   79 (99)
Q Consensus        77 ~~~   79 (99)
                      ...
T Consensus       155 ~~~  157 (188)
T PF01163_consen  155 DSS  157 (188)
T ss_dssp             ETT
T ss_pred             ecC
Confidence            655

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.35  E-value=2.8e-06  Score=52.23  Aligned_cols=66  Identities=24%  Similarity=0.346  Sum_probs=51.4

Q ss_pred             CeEEEEEeeCCCCchhhhcc-chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          8 QSCLVFPYSYGTKSGEQIST-GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~-~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ..++||||++|-.+.+...- ..+...+...+.-+|..|+.|.|..|.|+++.    ...+++.|++..+.
T Consensus       117 ~~~ll~EYIeG~~l~d~~~i~e~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~----~~~i~iID~~~k~~  183 (229)
T PF06176_consen  117 SYVLLMEYIEGVELNDIEDIDEDLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS----NNGIRIIDTQGKRM  183 (229)
T ss_pred             EEEEEEEEecCeecccchhcCHHHHHHHHHHHHHHHHcCCccCCCCcCcEEEE----CCcEEEEECccccc
Confidence            35689999999888665432 23556788889999999999999999999983    33388999976553

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.21  E-value=7.8e-06  Score=56.11  Aligned_cols=75  Identities=15%  Similarity=0.341  Sum_probs=50.7

Q ss_pred             CCeEEEEEeeCCCCchhh--hccc-----hHHHHHHH-HHHHHhhCCeeecCcCCCcEEEeeC-CCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQ--ISTG-----KEDREWIG-RIDYIHSRNFIHRDIKPDNFLMGLG-KRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~--l~~~-----~~~~~i~~-~l~~lh~~~i~h~~l~~~~~l~~~~-~~~~~~~l~d~g~a~~   77 (99)
                      +..++||||++|+++.+.  +...     .++...+. -+.-+...|++|+|.+|.|+++..+ .....+.+.|||....
T Consensus       234 t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~  313 (537)
T PRK04750        234 SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGS  313 (537)
T ss_pred             CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEE
Confidence            456799999999998763  3222     23332222 2233567899999999999999521 1113789999999987


Q ss_pred             CCCC
Q psy14897         78 VPSS   81 (99)
Q Consensus        78 ~~~~   81 (99)
                      +...
T Consensus       314 l~~~  317 (537)
T PRK04750        314 LNKE  317 (537)
T ss_pred             CCHH
Confidence            7543

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.17  E-value=4.1e-06  Score=53.34  Aligned_cols=85  Identities=19%  Similarity=0.275  Sum_probs=51.3

Q ss_pred             CeEEEEEeeCCCCchhhhcc---c-------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEee
Q psy14897          8 QSCLVFPYSYGTKSGEQIST---G-------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIID   71 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~---~-------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d   71 (99)
                      +.+++|+-+. +||.+.+..   .             .+-.|++..+.++|+.|++|.|++++|+++.   ..+.+.+.|
T Consensus       113 n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~---~~G~v~Lg~  188 (288)
T PF14531_consen  113 NRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLD---QDGGVFLGD  188 (288)
T ss_dssp             SEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE----TTS-EEE--
T ss_pred             hhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEc---CCCCEEEcC
Confidence            3466777664 477665431   0             1347889999999999999999999999994   567799999


Q ss_pred             ccceecCCCCCCccceeeccceecccc
Q psy14897         72 FGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        72 ~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |+...........  ...+..+.+||.
T Consensus       189 F~~~~r~g~~~~~--~~~~~~~~PPe~  213 (288)
T PF14531_consen  189 FSSLVRAGTRYRC--SEFPVAFTPPEL  213 (288)
T ss_dssp             GGGEEETTEEEEG--GGS-TTTS-HHH
T ss_pred             hHHHeecCceeec--cCCCcccCChhh
Confidence            9876654332211  233455666653

>KOG0590|consensus

Probab=97.91  E-value=3.2e-06  Score=58.69  Aligned_cols=89  Identities=25%  Similarity=0.330  Sum_probs=69.9

Q ss_pred             CCeEEEEEeeCCCCchhhh-cc----------chHHHHHHHHHHHHh-hCCeeecCcCCCcEEEeeCCCCC-eEEEeecc
Q psy14897          7 TQSCLVFPYSYGTKSGEQI-ST----------GKEDREWIGRIDYIH-SRNFIHRDIKPDNFLMGLGKRGN-LVYIIDFG   73 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l-~~----------~~~~~~i~~~l~~lh-~~~i~h~~l~~~~~l~~~~~~~~-~~~l~d~g   73 (99)
                      ...++.+||..++++++.+ ..          +.++.|+..++.|+| ..++.|++++|+|.++.   ... .++..|||
T Consensus        94 ~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~---~s~~~l~~~df~  170 (601)
T KOG0590|consen   94 RSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLD---ESGSALKIADFG  170 (601)
T ss_pred             cccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhc---cCCCcccCCCch
Confidence            4567889999999998887 32          338899999999999 99999999999999885   333 68999999


Q ss_pred             ceecCCC-CC---Cccceee-ccceecccc
Q psy14897         74 LAKNVPS-SP---SYERHVT-TQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~-~~---~~~~~~~-t~~~~~~~~   98 (99)
                      +|..+.. ..   .....+| +..|.+||.
T Consensus       171 ~At~~~~~~g~~~~~~~~~g~s~~y~a~E~  200 (601)
T KOG0590|consen  171 LATAYRNKNGAERSLKDRCGSSPPYGAPEH  200 (601)
T ss_pred             hhccccccCCcceeeecccCCCCCCCCccc
Confidence            9988765 22   2344477 778888774

>KOG1023|consensus

Probab=97.89  E-value=3.7e-05  Score=52.15  Aligned_cols=71  Identities=18%  Similarity=0.302  Sum_probs=60.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCe-eecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNF-IHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i-~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      +...+.|-+|+..|+|.+.+....          +.+.++.|+.|+|.-.+ .|..++..|++++   ....+|+.|||+
T Consensus        19 ~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd---~~w~lklt~~Gl   95 (484)
T KOG1023|consen   19 GPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVD---SRWVLKLTDFGL   95 (484)
T ss_pred             CCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceee---eeEEEEechhhh
Confidence            367889999999999999987633          56889999999997654 9999999999994   667899999999


Q ss_pred             eecCC
Q psy14897         75 AKNVP   79 (99)
Q Consensus        75 a~~~~   79 (99)
                      .....
T Consensus        96 ~~~~~  100 (484)
T KOG1023|consen   96 NSLLE  100 (484)
T ss_pred             ccccc
Confidence            87653

>KOG1266|consensus

Probab=97.87  E-value=3.9e-05  Score=50.00  Aligned_cols=54  Identities=15%  Similarity=0.262  Sum_probs=45.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhC--CeeecCcCCCcEEEe
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSR--NFIHRDIKPDNFLMG   59 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~--~i~h~~l~~~~~l~~   59 (99)
                      .....++.|||+.|++.++|++             ++|+.||+.++.|||++  .++|.++....+++.
T Consensus       144 ~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq  212 (458)
T KOG1266|consen  144 KPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ  212 (458)
T ss_pred             ccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeec
Confidence            3457889999999999999974             34999999999999987  488999988888873

>KOG1240|consensus

Probab=97.81  E-value=6.2e-06  Score=60.25  Aligned_cols=63  Identities=27%  Similarity=0.334  Sum_probs=48.0

Q ss_pred             EEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897         11 LVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus        11 ~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ||=+|+.+ +|.+.+..+.         ++-|++.++.-+|..+++|.|+|.+|+++.   .-..+.+.||..-+.
T Consensus        98 lvRqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT---SWNW~~LtDFAsFKP  169 (1431)
T KOG1240|consen   98 LVRQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT---SWNWLYLTDFASFKP  169 (1431)
T ss_pred             HHHHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe---eechhhhhcccccCC
Confidence            33345554 6777665443         678999999999999999999999999995   334478899986554

>KOG0606|consensus

Probab=97.76  E-value=1.5e-05  Score=58.01  Aligned_cols=66  Identities=27%  Similarity=0.402  Sum_probs=50.3

Q ss_pred             HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCC----------------CCccceeeccce
Q psy14897         30 EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS----------------PSYERHVTTQTT   93 (99)
Q Consensus        30 ~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~----------------~~~~~~~~t~~~   93 (99)
                      ...+++.+++|+|+-+++|+|+++.|.++.   .-..+|+.|||+++.....                -.-...|+|..|
T Consensus       148 lPvdmvla~Eylh~ygivhrdlkpdnllIT---~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPey  224 (1205)
T KOG0606|consen  148 LPVDMVLAVEYLHSYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEY  224 (1205)
T ss_pred             CcchhhHHhHhhccCCeecCCCCCCcceee---ecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccc
Confidence            445668999999999999999999999995   4456899999997653111                011345889999


Q ss_pred             ecccc
Q psy14897         94 RIGRI   98 (99)
Q Consensus        94 ~~~~~   98 (99)
                      ++|++
T Consensus       225 iaPeV  229 (1205)
T KOG0606|consen  225 IAPEV  229 (1205)
T ss_pred             cChhh
Confidence            98875

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.47  E-value=0.0009  Score=42.66  Aligned_cols=74  Identities=18%  Similarity=0.236  Sum_probs=54.6

Q ss_pred             CCCCCCCeEEEEEeeCCCCchhhh-cc---chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          2 KPFRSTQSCLVFPYSYGTKSGEQI-ST---GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         2 ~~~~~~~~~~v~e~~~~g~l~~~l-~~---~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +|+..+.-.+||||++|-.|...- +.   ..++..|+.-+.-.-..|++|.|++.=|+++.   ....+.+.||.-+-.
T Consensus       175 ~P~~~nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~---~dg~~~vIDwPQ~v~  251 (304)
T COG0478         175 KPIAWNRHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVT---EDGDIVVIDWPQAVP  251 (304)
T ss_pred             CccccccceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEe---cCCCEEEEeCccccc
Confidence            466777889999999996665433 12   22566677777666689999999999999995   444588999976654


Q ss_pred             C
Q psy14897         78 V   78 (99)
Q Consensus        78 ~   78 (99)
                      .
T Consensus       252 ~  252 (304)
T COG0478         252 I  252 (304)
T ss_pred             C
Confidence            4

>PRK09902 hypothetical protein; Provisional

Probab=97.41  E-value=0.00098  Score=40.96  Aligned_cols=69  Identities=12%  Similarity=-0.024  Sum_probs=53.2

Q ss_pred             eEEEEEeeCC-CCchhhhcc-----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          9 SCLVFPYSYG-TKSGEQIST-----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         9 ~~~v~e~~~~-g~l~~~l~~-----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      -++|+|-+.+ -+|.+++..           +.+..++...+.-+|+.++.|+++.+.||++... ....+.++||..++
T Consensus       100 A~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~-g~~~v~lIDlEk~r  178 (216)
T PRK09902        100 ALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTE-GKAEAGFLDLEKSR  178 (216)
T ss_pred             EEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCC-CCeeEEEEEhhccc
Confidence            6889997775 367777643           2467888999999999999999999999999421 23348899998776


Q ss_pred             cC
Q psy14897         77 NV   78 (99)
Q Consensus        77 ~~   78 (99)
                      ..
T Consensus       179 ~~  180 (216)
T PRK09902        179 RR  180 (216)
T ss_pred             hh
Confidence            54

>KOG1235|consensus

Probab=97.39  E-value=0.0012  Score=45.62  Aligned_cols=76  Identities=22%  Similarity=0.343  Sum_probs=52.2

Q ss_pred             CCCeEEEEEeeCCCCchhh--hccch-----HHHHHHHHH-HHHhhCCeeecCcCCCcEEEeeC-CCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQ--ISTGK-----EDREWIGRI-DYIHSRNFIHRDIKPDNFLMGLG-KRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~--l~~~~-----~~~~i~~~l-~~lh~~~i~h~~l~~~~~l~~~~-~~~~~~~l~d~g~a~   76 (99)
                      ...-.++|||++|..+.+.  +++++     +...+..+. .-+...|++|.|-.|-|+++..+ .....+.+.|+|+..
T Consensus       274 st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~  353 (538)
T KOG1235|consen  274 STKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYA  353 (538)
T ss_pred             CcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccc
Confidence            4578999999999877554  33332     333333322 23456789999999999999633 245678899999988


Q ss_pred             cCCCC
Q psy14897         77 NVPSS   81 (99)
Q Consensus        77 ~~~~~   81 (99)
                      .+...
T Consensus       354 ~is~~  358 (538)
T KOG1235|consen  354 VISHK  358 (538)
T ss_pred             cccHH
Confidence            76544

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.30  E-value=0.0015  Score=39.33  Aligned_cols=33  Identities=24%  Similarity=0.395  Sum_probs=24.1

Q ss_pred             CCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897         44 RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus        44 ~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ..++|.|+.+.|+++..+ ....+.+.||+.+..
T Consensus       174 ~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~~  206 (223)
T cd05154         174 PGLVHGDYRLGNVLFHPD-EPRVVAVLDWELATL  206 (223)
T ss_pred             cEEEECCCCcccEEEcCC-CCcEEEEEecccccc
Confidence            357899999999999511 134578999987763

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3741|consensus

Probab=96.98  E-value=0.0061  Score=42.26  Aligned_cols=78  Identities=14%  Similarity=0.140  Sum_probs=57.4

Q ss_pred             CCCCCCCeEEEEEeeCC-CCchhhhcc------------------------chHHHHHHHHHHHHhhCCeeecCcCCCcE
Q psy14897          2 KPFRSTQSCLVFPYSYG-TKSGEQIST------------------------GKEDREWIGRIDYIHSRNFIHRDIKPDNF   56 (99)
Q Consensus         2 ~~~~~~~~~~v~e~~~~-g~l~~~l~~------------------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~   56 (99)
                      +.|.+..+++|++|..+ ++|.+.-..                        ..++.|+..+|.++|+.|+..+.+.+.++
T Consensus       345 ~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kI  424 (655)
T KOG3741|consen  345 YTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKI  424 (655)
T ss_pred             hccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHe
Confidence            35667789999999886 344443210                        01689999999999999999999999999


Q ss_pred             EEeeCCCCCeEEEeeccceecCCCCC
Q psy14897         57 LMGLGKRGNLVYIIDFGLAKNVPSSP   82 (99)
Q Consensus        57 l~~~~~~~~~~~l~d~g~a~~~~~~~   82 (99)
                      ++.   ...++++...|....+...+
T Consensus       425 lv~---G~~RIriS~C~i~Dvl~~d~  447 (655)
T KOG3741|consen  425 LVT---GKMRIRISGCGIMDVLQEDP  447 (655)
T ss_pred             Eee---CcceEEEecccceeeecCCC
Confidence            984   44478888777766654443

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=96.80  E-value=0.0058  Score=42.21  Aligned_cols=73  Identities=18%  Similarity=0.361  Sum_probs=51.4

Q ss_pred             CCCeEEEEEeeCCCCchhhh--ccc-----hHHHHHHHH-HHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQI--STG-----KEDREWIGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l--~~~-----~~~~~i~~~-l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      .++-.++|||++|-.+.+..  ++.     .++..++.. +.-+-..|++|.|..|-|+++.   ....+-..|||....
T Consensus       238 t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~---~~g~i~~lDfGi~g~  314 (517)
T COG0661         238 TTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFFHADPHPGNILVR---SDGRIVLLDFGIVGR  314 (517)
T ss_pred             cCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCccceEEe---cCCcEEEEcCcceec
Confidence            35678999999998887763  322     133332222 2334568999999999999994   456688999998877


Q ss_pred             CCCC
Q psy14897         78 VPSS   81 (99)
Q Consensus        78 ~~~~   81 (99)
                      +.+.
T Consensus       315 l~~~  318 (517)
T COG0661         315 LDPK  318 (517)
T ss_pred             CCHH
Confidence            6543

>KOG2268|consensus

Probab=96.30  E-value=0.0091  Score=39.53  Aligned_cols=74  Identities=19%  Similarity=0.307  Sum_probs=56.3

Q ss_pred             CCCCCCCeEEEEEeeCCCCchhhh---ccchHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          2 KPFRSTQSCLVFPYSYGTKSGEQI---STGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         2 ~~~~~~~~~~v~e~~~~g~l~~~l---~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      +++..+.-++|||++.+-.|-..-   ....+...+..-+.-|...|+||.|...=|+++.   ....+.++||.-.-..
T Consensus       176 kpiD~~RH~Vvmelv~g~Pl~~v~~v~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~---dd~~i~vIDFPQmvS~  252 (465)
T KOG2268|consen  176 KPIDHNRHCVVMELVDGYPLRQVRHVEDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVK---DDDKIVVIDFPQMVST  252 (465)
T ss_pred             CcccccceeeHHHhhcccceeeeeecCChHHHHHHHHHHHHHHHHcCceecccchheeEEe---cCCCEEEeechHhhcc
Confidence            567788899999999987665433   2334667777778888999999999999999985   3555889999754433

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=96.07  E-value=0.055  Score=34.32  Aligned_cols=74  Identities=16%  Similarity=0.257  Sum_probs=52.8

Q ss_pred             CCCCCCCeEEEEEeeCCCC-chhhhc--------cchHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEEEee
Q psy14897          2 KPFRSTQSCLVFPYSYGTK-SGEQIS--------TGKEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIID   71 (99)
Q Consensus         2 ~~~~~~~~~~v~e~~~~g~-l~~~l~--------~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~l~d   71 (99)
                      +|+.-.+..+||||+.... -.-.|+        ...+..+++..+.-|-. .+++|.|++.=|+++.    ...+.++|
T Consensus       134 ~Pi~~~~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~----~~~p~iID  209 (268)
T COG1718         134 EPIAFRNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH----DGEPYIID  209 (268)
T ss_pred             CceeecCCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE----CCeEEEEE
Confidence            3455567789999998641 111121        23356778888887776 8999999999999994    34578999


Q ss_pred             ccceecCC
Q psy14897         72 FGLAKNVP   79 (99)
Q Consensus        72 ~g~a~~~~   79 (99)
                      ++-|-...
T Consensus       210 ~~QaV~~~  217 (268)
T COG1718         210 VSQAVTID  217 (268)
T ss_pred             CccccccC
Confidence            99877654

>KOG1243|consensus

Probab=95.96  E-value=0.044  Score=38.97  Aligned_cols=68  Identities=9%  Similarity=0.092  Sum_probs=51.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch------HHHHHHHHHHHHh-hCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK------EDREWIGRIDYIH-SRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~------~~~~i~~~l~~lh-~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ++.+|+|+|-+.  .|...+++..      -+.||+.+|.||| +++++|.++...++++   ......++.+|..+...
T Consensus        81 ~~~~ylvTErV~--Pl~~~lk~l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV---n~~GeWkLggle~v~~~  155 (690)
T KOG1243|consen   81 EGTLYLVTERVR--PLETVLKELGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV---NESGEWKLGGLELVSKA  155 (690)
T ss_pred             cCceEEEeeccc--cHHHHHHHhHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE---cCCCcEEEeeeEEEecc
Confidence            457899999776  4555554432      2588999999997 6899999999999998   45666888888776543

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=95.03  E-value=0.26  Score=30.46  Aligned_cols=29  Identities=24%  Similarity=0.312  Sum_probs=23.5

Q ss_pred             CeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897         45 NFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus        45 ~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .++|.|+.+.|+++.   .+....+.||+.+.
T Consensus       164 ~l~HgD~~~~Nil~~---~~~~~~iIDwe~a~  192 (244)
T cd05150         164 VVTHGDACLPNIIVD---PGKFSGFIDLGRLG  192 (244)
T ss_pred             EEECCCCCCccEEEe---CCcEEEEEEccccc
Confidence            489999999999994   34556899998775

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=94.98  E-value=0.12  Score=31.77  Aligned_cols=54  Identities=17%  Similarity=0.294  Sum_probs=40.2

Q ss_pred             EEEEEeeCCCCchhhhccchHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897         10 CLVFPYSYGTKSGEQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus        10 ~~v~e~~~~g~l~~~l~~~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      -+|.||+....    .....-+.++..-+..+|..+|+.+|++..|..-        -++.|||.+
T Consensus       153 aIVKD~v~~~~----~~~~~~~~~~~~dl~~~~k~gI~~~Dv~~~ny~~--------G~lvDfs~~  206 (207)
T PF13095_consen  153 AIVKDFVPDDP----PLQIRDIPQMLRDLKILHKLGIVPRDVKPRNYRG--------GKLVDFSSS  206 (207)
T ss_pred             EEEEeecCCcc----ccchhHHHHHHHHHHHHHHCCeeeccCccccccC--------CEEEecccC
Confidence            47888887644    1122356788889999999999999999988763        267888753

>KOG0601|consensus

Probab=94.70  E-value=0.013  Score=40.54  Aligned_cols=68  Identities=26%  Similarity=0.417  Sum_probs=50.3

Q ss_pred             CCeEEEEEeeCCCCchhhhcc---------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST---------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~---------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.++--||++++++...+..         .....|++.++.++|+..++|.|+++.|+++.  ..+...++.+++...
T Consensus       339 r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~--~~~~~~~~~~~~~~t  415 (524)
T KOG0601|consen  339 RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILIS--NDGFFSKLGDFGCWT  415 (524)
T ss_pred             ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeec--cchhhhhcccccccc
Confidence            455677889998876654421         22568899999999999999999999999984  212455677777654

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=94.64  E-value=0.49  Score=28.89  Aligned_cols=71  Identities=18%  Similarity=0.254  Sum_probs=45.9

Q ss_pred             CCeEEEEEeeCCC------CchhhhccchHHHHH----HHHHHHHhhCCeeecCcCCCcEEEeeCCCCC-eEEEee-ccc
Q psy14897          7 TQSCLVFPYSYGT------KSGEQISTGKEDREW----IGRIDYIHSRNFIHRDIKPDNFLMGLGKRGN-LVYIID-FGL   74 (99)
Q Consensus         7 ~~~~~v~e~~~~g------~l~~~l~~~~~~~~i----~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~-~~~l~d-~g~   74 (99)
                      ..+-+|+|.+.+.      +|.++++...+..++    -.-..++-+..|+.+|+++.|+++.....+. .+.+.| +|.
T Consensus        90 ~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~~~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~  169 (199)
T PF10707_consen   90 LGLGLVVELIRDADGNISPTLEDYLKEGGLTEELRQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGE  169 (199)
T ss_pred             CceEEEEEEEECCCCCcCccHHHHHHcCCccHHHHHHHHHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCCC
Confidence            3456788876642      456666554433333    3334678899999999999999997655555 455555 554


Q ss_pred             eec
Q psy14897         75 AKN   77 (99)
Q Consensus        75 a~~   77 (99)
                      ...
T Consensus       170 ~~~  172 (199)
T PF10707_consen  170 KEL  172 (199)
T ss_pred             ccc
Confidence            443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG0606|consensus

Probab=94.40  E-value=0.024  Score=42.30  Aligned_cols=70  Identities=24%  Similarity=0.280  Sum_probs=55.0

Q ss_pred             CCCCCeEEEEEeeCCCCchhhhcc---------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          4 FRSTQSCLVFPYSYGTKSGEQIST---------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         4 ~~~~~~~~v~e~~~~g~l~~~l~~---------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+...+++|++|+.+++|.+.+..         +.+...+..+..++|+..+.|++.++.+.+..   .....++.+++.
T Consensus       874 ~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~---~~gh~~l~~~~t  950 (1205)
T KOG0606|consen  874 PCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIA---YDGHRPLTDFGT  950 (1205)
T ss_pred             CCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhc---ccCCcccCcccc
Confidence            356788999999999999998753         22667788889999999899999999999874   444466777764


Q ss_pred             ee
Q psy14897         75 AK   76 (99)
Q Consensus        75 a~   76 (99)
                      .+
T Consensus       951 ~~  952 (1205)
T KOG0606|consen  951 LS  952 (1205)
T ss_pred             cc
Confidence            33

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=93.93  E-value=0.38  Score=29.01  Aligned_cols=67  Identities=16%  Similarity=0.174  Sum_probs=47.9

Q ss_pred             CCeEEEEEeeCCCCch-------hhhc-----cchHHHHHHHHHHHHhh---CCeeecCcCCCcEEEeeCCCCCeEEEee
Q psy14897          7 TQSCLVFPYSYGTKSG-------EQIS-----TGKEDREWIGRIDYIHS---RNFIHRDIKPDNFLMGLGKRGNLVYIID   71 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~-------~~l~-----~~~~~~~i~~~l~~lh~---~~i~h~~l~~~~~l~~~~~~~~~~~l~d   71 (99)
                      -..++|.||...+++.       .+..     +-+++.+++..+.+++.   ..+.-.|+++.|+.+.   ....+++.|
T Consensus        29 CG~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~---~~~~lk~iD  105 (188)
T PF12260_consen   29 CGRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVN---DDGRLKLID  105 (188)
T ss_pred             CCCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEe---CCCcEEEEe
Confidence            3567899999987553       3222     23478888888888886   3577799999999984   445688888


Q ss_pred             cccee
Q psy14897         72 FGLAK   76 (99)
Q Consensus        72 ~g~a~   76 (99)
                      .....
T Consensus       106 ld~v~  110 (188)
T PF12260_consen  106 LDDVF  110 (188)
T ss_pred             chhcc
Confidence            77543

Proteins in this uncharacterised family are described as transmembrane proteins.

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=92.95  E-value=0.21  Score=30.32  Aligned_cols=67  Identities=21%  Similarity=0.236  Sum_probs=47.2

Q ss_pred             CCeEEEEEeeCCCCchhhhc--cchHHHHHHHHHHHHhhCCeeecCcCCC--cEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQIS--TGKEDREWIGRIDYIHSRNFIHRDIKPD--NFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~--~~~~~~~i~~~l~~lh~~~i~h~~l~~~--~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +..++.|||++|-.|.+...  .++-...++..-.-|-..||-|.+++..  |+++    +...+.++||..|..
T Consensus        85 g~~~i~me~i~G~~L~~~~~~~~rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv----~~~~~~iIDFd~At~  155 (201)
T COG2112          85 GEDFIRMEYIDGRPLGKLEIGGDRKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLV----NDRDVYIIDFDSATF  155 (201)
T ss_pred             chhhhhhhhhcCcchhhhhhcccHHHHHHHHHHHHHHHHhccchhhhcCCceeEEe----cCCcEEEEEccchhh
Confidence            44566799999988877665  3445555666655567789999988764  4554    333588999998874

>KOG0601|consensus

Probab=92.90  E-value=0.15  Score=35.57  Aligned_cols=74  Identities=22%  Similarity=0.339  Sum_probs=51.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHH----HHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIG----RIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIID   71 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~----~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d   71 (99)
                      ++.+++-.|+.. .++.++-..          .....++..    |+.++|+.+++|.++++.|++..  .....+++.|
T Consensus       190 ~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~--~~~~s~~~~d  266 (524)
T KOG0601|consen  190 SGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTT--SDWTSCKLTD  266 (524)
T ss_pred             CCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecc--cccceeecCC
Confidence            345677777766 344443221          113455556    99999999999999999999985  2226688999


Q ss_pred             ccceecCCCCC
Q psy14897         72 FGLAKNVPSSP   82 (99)
Q Consensus        72 ~g~a~~~~~~~   82 (99)
                      |++...+.+..
T Consensus       267 f~~v~~i~~~~  277 (524)
T KOG0601|consen  267 FGLVSKISDGN  277 (524)
T ss_pred             cceeEEccCCc
Confidence            99888776554

>KOG0195|consensus

Probab=90.13  E-value=0.73  Score=30.09  Aligned_cols=53  Identities=6%  Similarity=0.060  Sum_probs=39.5

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCC--eeecCcCCCcEEEe
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRN--FIHRDIKPDNFLMG   59 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~--i~h~~l~~~~~l~~   59 (99)
                      -++.++..||..|+|...+-..           +++..++.|+.|+|+..  +..-.+....+.++
T Consensus       260 pnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmid  325 (448)
T KOG0195|consen  260 PNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMID  325 (448)
T ss_pred             CCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEec
Confidence            3578899999999999988542           38899999999999864  33334555666663

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=90.00  E-value=1.3  Score=30.79  Aligned_cols=40  Identities=18%  Similarity=0.365  Sum_probs=32.0

Q ss_pred             HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897         30 EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus        30 ~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      .++.++.+..-+|..|..-.|++.+|+++.   ....+.+.|-
T Consensus       122 vaRnlA~aFA~lH~~Gh~vGDVn~~~~lVs---d~~~V~LVds  161 (637)
T COG4248         122 VARNLASAFATLHEHGHVVGDVNQNSFLVS---DDSKVVLVDS  161 (637)
T ss_pred             HHHHHHHHHHHHHhcCCcccccCccceeee---cCceEEEEcc
Confidence            568888899999999999999999999995   4444555553

>PRK05231 homoserine kinase; Provisional

Probab=87.52  E-value=0.7  Score=29.74  Aligned_cols=30  Identities=40%  Similarity=0.490  Sum_probs=24.0

Q ss_pred             CCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897         44 RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus        44 ~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+++|.|+.+.|+++.   .+....+.||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~---~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFE---GDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEE---CCceEEEEeccccc
Confidence            4799999999999994   34445799998764

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=86.65  E-value=1.1  Score=27.62  Aligned_cols=29  Identities=38%  Similarity=0.708  Sum_probs=23.4

Q ss_pred             CeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897         45 NFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus        45 ~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .++|.|+.+.|+++.   .+....+.||+.+.
T Consensus       165 ~l~HGD~~~~Nvlv~---~~~i~giIDw~~a~  193 (235)
T cd05155         165 VWFHGDLAPGNLLVQ---DGRLSAVIDFGCLG  193 (235)
T ss_pred             eEEeCCCCCCcEEEE---CCCEEEEEeCcccC
Confidence            489999999999994   44455799999765

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=84.76  E-value=1.4  Score=26.43  Aligned_cols=32  Identities=34%  Similarity=0.453  Sum_probs=20.3

Q ss_pred             CCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897         44 RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus        44 ~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ..++|.|+.+.|+++.  ..+..+.+.||+.+..
T Consensus       166 ~~~~HgD~~~~Nil~~--~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVD--PSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             EEEE-SS-SGGGEEEE--SSTTEEEE--GTT-EE
T ss_pred             cEEEEeccccccceee--eccceeEEEecccceE
Confidence            4699999999999995  2345458999987654

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=83.11  E-value=8.2  Score=26.60  Aligned_cols=30  Identities=37%  Similarity=0.582  Sum_probs=25.3

Q ss_pred             CeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897         45 NFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus        45 ~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      .+.|+++...|+++.    .+.+.++||.+++--
T Consensus       342 ~fehrnlt~~niLId----~GnvtLIDfklsRl~  371 (488)
T COG5072         342 PFEHRNLTLDNILID----EGNVTLIDFKLSRLS  371 (488)
T ss_pred             Ccccccccccceeee----cCceEEEEeeeeecc
Confidence            688999999999993    456899999999843

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=82.90  E-value=4  Score=26.22  Aligned_cols=30  Identities=40%  Similarity=0.592  Sum_probs=24.1

Q ss_pred             CCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897         44 RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus        44 ~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+++|.|+.+.|+++.   ......+.||+.+.
T Consensus       187 ~~l~HgD~~~~Nvl~~---~~~~~~vIDfd~~~  216 (307)
T TIGR00938       187 RGVIHADLFPDNVLFD---GDSVKGVIDFYFAC  216 (307)
T ss_pred             CccCCCCCCcCcEEEE---CCceEEEeeccccc
Confidence            5799999999999995   33445799998774

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=81.80  E-value=2.1  Score=27.31  Aligned_cols=33  Identities=27%  Similarity=0.393  Sum_probs=24.2

Q ss_pred             CeeecCcCCCcEEEeeC-CCCCeEEEeeccceec
Q psy14897         45 NFIHRDIKPDNFLMGLG-KRGNLVYIIDFGLAKN   77 (99)
Q Consensus        45 ~i~h~~l~~~~~l~~~~-~~~~~~~l~d~g~a~~   77 (99)
                      .++|.|+.+.|+++..+ .....+.+.||..|..
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            58999999999998411 0024588999988753

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=81.32  E-value=2.6  Score=25.80  Aligned_cols=31  Identities=29%  Similarity=0.443  Sum_probs=24.2

Q ss_pred             CeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897         45 NFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus        45 ~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      .++|.|+.+.|++..  ..+..+.+.||..|..
T Consensus       171 ~l~H~Dl~~~Nil~~--~~~~~~~lIDwe~a~~  201 (235)
T cd05157         171 VFCHNDLLSGNIIYN--EEKNSVKFIDYEYAGY  201 (235)
T ss_pred             EEEcCCCCcCcEEEe--CCCCCEEEEEcccCCc
Confidence            589999999999985  2134588999987653

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=80.84  E-value=1.8  Score=27.46  Aligned_cols=30  Identities=40%  Similarity=0.530  Sum_probs=23.8

Q ss_pred             CCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897         44 RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus        44 ~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+++|.|+.+.|+++.   ......+.||..+.
T Consensus       175 ~~l~HgD~~~~Nil~~---~~~~~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFRDNVLFD---GDELSGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCcccEEEe---CCceEEEeehhhhc
Confidence            4699999999999994   34446799998764

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	99
4hni_A	296	Crystal Structure Of Ck1e In Complex With Pf4800567		7e-18
1ckj_A	317	Casein Kinase I Delta Truncation Mutant Containing		9e-18
3uys_A	296	Crystal Structure Of Apo Human Ck1d Length = 296		9e-18
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		2e-15
2cmw_A	310	Structure Of Human Casein Kinase 1 Gamma-1 In Compl		3e-09
4hgl_A	330	Crystal Structure Of Ck1g3 With Compound 1 Length =		5e-09
2chl_A	351	Structure Of Casein Kinase 1 Gamma 3 Length = 351		2e-08
2izr_A	330	Structure Of Casein Kinase Gamma 3 In Complex With		2e-08
2c47_A	313	Structure Of Casein Kinase 1 Gamma 2 Length = 313		2e-08
2csn_A	297	Binary Complex Of Casein Kinase-1 With Cki7 Length		4e-08
1eh4_A	298	Binary Complex Of Casein Kinase-1 From S. Pombe Wit		4e-08
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		5e-06
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		6e-06
3kk9_A	282	Camkii Substrate Complex B Length = 282		7e-06
3kk8_A	284	Camkii Substrate Complex A Length = 284		7e-06
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		8e-06
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		8e-06
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		1e-05
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		2e-05
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-05
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-05
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-05
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-05
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-05
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-05
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-05
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-05
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-05
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-05
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-05
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-05
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-05
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-05
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-05
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-05
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		2e-05
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-05
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-05
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		2e-05
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-05
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		2e-05
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		2e-05
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		2e-05
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-05
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		2e-05
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		2e-05
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		3e-05
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		3e-05
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		3e-05
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		3e-05
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		3e-05
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		3e-05
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		3e-05
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		3e-05
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		3e-05
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		3e-05
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		3e-05
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		3e-05
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		3e-05
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		3e-05
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		3e-05
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		3e-05
2oza_A	356	Structure Of P38alpha Complex Length = 356		3e-05
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		3e-05
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		4e-05
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		5e-05
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		5e-05
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		5e-05
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		5e-05
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		5e-05
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		5e-05
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		5e-05
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		5e-05
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		5e-05
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		5e-05
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		6e-05
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		6e-05
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		6e-05
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		7e-05
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		7e-05
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		8e-05
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		9e-05
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-04
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		1e-04
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-04
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		1e-04
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		2e-04
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		2e-04
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		2e-04
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		2e-04
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-04
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-04
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		2e-04
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		2e-04
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		2e-04
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-04
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-04
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		2e-04
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		2e-04
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		2e-04
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		2e-04
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		2e-04
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		2e-04
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		2e-04
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		2e-04
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		2e-04
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-04
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		3e-04
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		3e-04
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		3e-04
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		3e-04
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		3e-04
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		3e-04
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		3e-04
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		3e-04
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		3e-04
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		3e-04
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		3e-04
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		3e-04
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		3e-04
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		3e-04
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		3e-04
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		3e-04
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		3e-04
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		3e-04
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		3e-04
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		3e-04
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		3e-04
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		3e-04
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		3e-04
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		3e-04
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		4e-04
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		4e-04
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		4e-04
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		4e-04
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		4e-04
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		4e-04
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		4e-04
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		4e-04
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		5e-04
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		5e-04
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		5e-04
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		5e-04
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		5e-04
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		5e-04
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		5e-04
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		5e-04
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		5e-04
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		5e-04
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		5e-04
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		5e-04
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		5e-04
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		5e-04
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		5e-04
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		5e-04
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		5e-04
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		5e-04
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		5e-04
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		5e-04
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		6e-04
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		6e-04
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		6e-04
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		6e-04
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		6e-04
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		6e-04
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		7e-04
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		7e-04
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		8e-04
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		8e-04
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		8e-04
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		8e-04
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		8e-04
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		8e-04
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		9e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		9e-04
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		9e-04
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		9e-04
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		9e-04
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		9e-04

>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296

Iteration: 1
 Score = 85.5 bits (210), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 6/73 (8%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS------PSYER 86
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    +      P  E 
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 172
Query: 87  HVTTQTTRIGRID 99
              T T R   I+
Sbjct: 173 KNLTGTARYASIN 185

>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317

Iteration: 1
 Score = 85.1 bits (209), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 6/73 (8%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS------PSYER 86
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    +      P  E 
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 170
Query: 87  HVTTQTTRIGRID 99
              T T R   I+
Sbjct: 171 KNLTGTARYASIN 183

>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296

Iteration: 1
 Score = 85.1 bits (209), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 6/73 (8%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS------PSYER 86
           + I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    +      P  E 
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 172
Query: 87  HVTTQTTRIGRID 99
              T T R   I+
Sbjct: 173 KNLTGTARYASIN 185

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 31/44 (70%), Positives = 40/44 (90%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + I R++++HS++F+HRDIKPDNFLMGLG+R N VYIIDFGLAK
Sbjct: 111 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154

>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9- Isopropylpurine (Casp Target) Length = 310

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 43/58 (74%), Gaps = 3/58 (5%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGL--GKRGNLVYIIDFGLAKNVPSSPSYERHV 88
           + + R++Y+HS+N I+RD+KP+NFL+G    K+ ++++IIDFGLAK     P  ++H+
Sbjct: 105 QLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEY-IDPETKKHI 161

>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1 Length = 330

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGL--GKRGNLVYIIDFGLAKNVPSSPSYERHV 88
           + I R++Y+HS+N I+RD+KP+NFL+G    K   +++IIDFGLAK     P  ++H+
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEY-IDPETKKHI 169

>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3 Length = 351

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGL--GKRGNLVYIIDFGLAKNVPSSPSYERHV 88
           + I R++Y+HS+N I+RD+KP+NFL+G    K   +++IIDF LAK     P  ++H+
Sbjct: 134 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY-IDPETKKHI 190

>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With Inhibitor Length = 330

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGL--GKRGNLVYIIDFGLAKNVPSSPSYERHV 88
           + I R++Y+HS+N I+RD+KP+NFL+G    K   +++IIDF LAK     P  ++H+
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY-IDPETKKHI 169

>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 42/58 (72%), Gaps = 3/58 (5%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGL--GKRGNLVYIIDFGLAKNVPSSPSYERHV 88
           + I R++Y+H+++ I+RD+KP+NFL+G    KR + ++IIDFGLAK     P  ++H+
Sbjct: 108 QLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEY-IDPETKKHI 164

>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGL--GKRGNLVYIIDFGLAK 76
           ++ + R+  IH ++ ++RDIKPDNFL+G    K  N++Y++DFG+ K
Sbjct: 112 KQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 158

>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/47 (42%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGL--GKRGNLVYIIDFGLAK 76
           ++ + R+  IH ++ ++RDIKPDNFL+G    K  N++Y++DFG+ K
Sbjct: 113 KQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           Y+H  N +HRD+KP+N L+    R  L+ I+DFGL+
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           Y+H  N +HRD+KP+N L+    R  L+ I+DFGL+ +
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH 173

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           I Y HS   +HR++KP+N L+    +G  V + DFGLA  V  S ++
Sbjct: 117 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 163

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           I Y HS   +HR++KP+N L+    +G  V + DFGLA  V  S ++
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 164

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           I Y HS   +HR++KP+N L+    +G  V + DFGLA  V  S ++
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 164

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 30/44 (68%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           ++ +  + Y+H  N +HRD+KP+N L+   ++  L+ I+DFGL+
Sbjct: 143 KQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 6   STQSCLVFPYS-YGT--KSGEQISTGKEDR------EWIGRIDYIHSRNFIHRDIKPDNF 56
           ST+  L+  Y+  GT  +  +++S   E R      E    + Y HS+  IHRDIKP+N 
Sbjct: 80  STRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENL 139
Query: 57  LMGLGKRGNLVYIIDFGLAKNVPSS 81
           L  LG  G L  I DFG + + PSS
Sbjct: 140 L--LGSAGEL-KIADFGWSVHAPSS 161

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 133 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 178

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 166

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 166

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 164

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLL--LGSAGELK-IADFGWSVHAPSS 166

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 161

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 164

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 166

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 161

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 161

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 118 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 163

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSCHAPSS 162

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 166

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 162

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 162

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 165

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 164

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLL--LGSNGEL-KIADFGWSVHAPSS 165

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 161

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 161

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 6   STQSCLVFPYS-YGT--KSGEQISTGKEDR------EWIGRIDYIHSRNFIHRDIKPDNF 56
           +T+  L+  Y+  GT  +  +++S   E R      E    + Y HS+  IHRDIKP+N 
Sbjct: 77  ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 136
Query: 57  LMGLGKRGNLVYIIDFGLAKNVPSS 81
           L  LG  G L  I DFG + + PSS
Sbjct: 137 L--LGSAGEL-KIADFGWSVHAPSS 158

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 115 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 160

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLL--LGSNGEL-KIADFGWSVHAPSS 165

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 24  QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           ++   +  R+ +  I Y+H    +HRD+KP+N L+    +   + IIDFGL+ +  +S  
Sbjct: 131 EVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 190
Query: 84  YERHVTT 90
            +  + T
Sbjct: 191 MKDKIGT 197

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 22  GEQISTGKEDREW---IGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           G+Q  T +E  E    IG  I Y+HS N  HRD+KP+N L    +   ++ + DFG AK 
Sbjct: 154 GDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213
Query: 78  VPSSPS 83
             S  S
Sbjct: 214 TTSHNS 219

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 20  KSGEQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
           K   ++   +  R+ +  I Y+H    +HRD+KP+N L+    +   + IIDFGL+ +  
Sbjct: 121 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
Query: 80  SSPSYERHVTT 90
           +S   +  + T
Sbjct: 181 ASKKMKDKIGT 191

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 161

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 15  YSYGTKSGEQISTGKEDREW---IGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYII 70
           +S   + G+Q  T +E  E    IG  I ++HS N  HRD+KP+N L    ++  ++ + 
Sbjct: 114 FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLT 173
Query: 71  DFGLAK----NVPSSPSY 84
           DFG AK    N   +P Y
Sbjct: 174 DFGFAKETTQNALQTPCY 191

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 164

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 161

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 20  KSGEQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
           K   ++   +  R+ +  I Y+H    +HRD+KP+N L+    +   + IIDFGL+ +  
Sbjct: 145 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 204
Query: 80  SSPSYERHVTT 90
           +S   +  + T
Sbjct: 205 ASKKMKDKIGT 215

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 20  KSGEQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
           K   ++   +  R+ +  I Y+H    +HRD+KP+N L+    +   + IIDFGL+ +  
Sbjct: 144 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 203
Query: 80  SSPSYERHVTT 90
           +S   +  + T
Sbjct: 204 ASKKMKDKIGT 214

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 22  GEQISTGKEDREW---IGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           G+Q  T +E  E    IG  I Y+HS N  HRD+KP+N L    +   ++ + DFG AK 
Sbjct: 108 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 167
Query: 78  VPSSPS 83
             S  S
Sbjct: 168 TTSHNS 173

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 22  GEQISTGKEDREW---IGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           G+Q  T +E  E    IG  I Y+HS N  HRD+KP+N L    +   ++ + DFG AK 
Sbjct: 109 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 168
Query: 78  VPSSPS 83
             S  S
Sbjct: 169 TTSHNS 174

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 22  GEQISTGKEDREW---IGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           G+Q  T +E  E    IG  I Y+HS N  HRD+KP+N L    +   ++ + DFG AK 
Sbjct: 108 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 167
Query: 78  VPSSPS 83
             S  S
Sbjct: 168 TTSHNS 173

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 22  GEQISTGKEDREW---IGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           G+Q  T +E  E    IG  I Y+HS N  HRD+KP+N L    +   ++ + DFG AK 
Sbjct: 124 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 183
Query: 78  VPSSPS 83
             S  S
Sbjct: 184 TTSHNS 189

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 22  GEQISTGKEDREW---IGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           G+Q  T +E  E    IG  I Y+HS N  HRD+KP+N L    +   ++ + DFG AK 
Sbjct: 115 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 174
Query: 78  VPSSPS 83
             S  S
Sbjct: 175 TTSHNS 180

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 22  GEQISTGKEDREW---IGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           G+Q  T +E  E    IG  I Y+HS N  HRD+KP+N L    +   ++ + DFG AK 
Sbjct: 114 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 173
Query: 78  VPSSPS 83
             S  S
Sbjct: 174 TTSHNS 179

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 22  GEQISTGKEDREW---IGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           G+Q  T +E  E    IG  I Y+HS N  HRD+KP+N L    +   ++ + DFG AK 
Sbjct: 110 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169
Query: 78  VPSSPS 83
             S  S
Sbjct: 170 TTSHNS 175

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 22  GEQISTGKEDREW---IGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           G+Q  T +E  E    IG  I Y+HS N  HRD+KP+N L    +   ++ + DFG AK 
Sbjct: 116 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 175
Query: 78  VPSSPS 83
             S  S
Sbjct: 176 TTSHNS 181

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 22  GEQISTGKEDREW---IGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           G+Q  T +E  E    IG  I Y+HS N  HRD+KP+N L    +   ++ + DFG AK 
Sbjct: 160 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 219
Query: 78  VPSSPS 83
             S  S
Sbjct: 220 TTSHNS 225

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 22  GEQISTGKEDREW---IGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           G+Q  T +E  E    IG  I Y+HS N  HRD+KP+N L    +   ++ + DFG AK 
Sbjct: 154 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213
Query: 78  VPSSPS 83
             S  S
Sbjct: 214 TTSHNS 219

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 15  YSYGTKSGEQISTGKEDREW---IGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYII 70
           +S   + G+Q  T +E  E    IG  I ++HS N  HRD+KP+N L    ++  ++ + 
Sbjct: 95  FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLT 154
Query: 71  DFGLAK----NVPSSPSY 84
           DFG AK    N   +P Y
Sbjct: 155 DFGFAKETTQNALQTPCY 172

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 164

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 22  GEQISTGKEDREW---IGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           G+Q  T +E  E    IG  I Y+HS N  HRD+KP+N L    +   ++ + DFG AK 
Sbjct: 110 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169
Query: 78  VPSSPS 83
             S  S
Sbjct: 170 TTSHNS 175

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           I Y HS   +HR++KP+N L+    +G  V + DFGLA  V  S ++
Sbjct: 141 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 187

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           +++IH  + +HRD+KP+N L+    +G  V + DFGLA  V
Sbjct: 143 VNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV 183

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 142 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 187

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           R+ +  + YIHS+  IHRD+KP N  +   +    V I DFGLAKNV  S
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRN---VKIGDFGLAKNVHRS 169

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 142 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIADFGWSVHAPSS 187

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           R+ +  + YIHS+  IHRD+KP N  +   +    V I DFGLAKNV  S
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRN---VKIGDFGLAKNVHRS 169

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           I Y+H  N +HRD+KP+N L+   ++   + IIDFGL+
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 35  IGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS--YERHVTTQT 92
           I  I + HS N IHRDIKP+N L+    +  +V + DFG A+ + ++P   Y+  V T+ 
Sbjct: 134 INGIGFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTL-AAPGEVYDDEVATRW 189
Query: 93  TR 94
            R
Sbjct: 190 YR 191

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS 80
           E    + Y H R  IHRDIKP+N LMG   +G L  I DFG + + PS
Sbjct: 122 ELADALHYCHERKVIHRDIKPENLLMGY--KGEL-KIADFGWSVHAPS 166

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS 80
           E    + Y H R  IHRDIKP+N LMG   +G L  I DFG + + PS
Sbjct: 123 ELADALHYCHERKVIHRDIKPENLLMGY--KGEL-KIADFGWSVHAPS 167

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 31/42 (73%), Gaps = 3/42 (7%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
           ++Y+HS++ I+RD+KP+N L  L K G+ + I DFG AK VP
Sbjct: 119 LEYLHSKDIIYRDLKPENIL--LDKNGH-IKITDFGFAKYVP 157

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           I Y+H  N +HRD+KP+N L+   ++   + IIDFGL+
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           I Y+H  N +HRD+KP+N L+   ++   + IIDFGL+
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I +FG + + PSS
Sbjct: 118 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIANFGWSVHAPSS 163

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 36/71 (50%)
Query: 20  KSGEQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
           K   ++   +  R+ +  I Y H    +HRD+KP+N L+    +   + IIDFGL+ +  
Sbjct: 121 KRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
Query: 80  SSPSYERHVTT 90
           +S   +  + T
Sbjct: 181 ASKKXKDKIGT 191

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 22  GEQISTGKEDREW---IGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           G+Q  T +E  E    IG  I Y+HS N  HRD+KP+N L    +   ++ + DFG AK
Sbjct: 110 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E    + Y HS+  IHRDIKP+N L  LG  G L  I +FG + + PSS
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLL--LGSAGEL-KIANFGWSVHAPSS 164

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           R+    + Y+H++   HRDIKP+NFL    K    + ++DFGL+K
Sbjct: 175 RQIFSALHYLHNQGICHRDIKPENFLFSTNKSFE-IKLVDFGLSK 218

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           RE +  ++++HS   IHRDIK DN L+G+      V + DFG    +
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQI 166

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           RE +  ++++HS   IHRDIK DN L+G+      V + DFG    +
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQI 166

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           RE +  ++++HS   IHRDIK DN L+G+      V + DFG    +
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQI 166

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ 91
           ++++ SR  IHRD+   N L+      N+V I DFGLA+++  +P Y R   T+
Sbjct: 212 MEFLSSRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKNPDYVRKGDTR 262

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           Y+HS+++IHR++   N L+       LV I DFGLAK VP    Y R
Sbjct: 132 YLHSQHYIHRNLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYR 175

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S   E  V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMEPEVVTRYYR 192

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S   E  V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMEPEVVTRYYR 192

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 7/58 (12%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           E +  +DY+ ++  IHRD+KPDN L  L + G+ V+I DF +A  +P     E  +TT
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNIL--LDEHGH-VHITDFNIAAMLPR----ETQITT 173

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           R+ +  + YIHS+  IHR++KP N  +   +    V I DFGLAKNV  S
Sbjct: 123 RQILEALSYIHSQGIIHRNLKPXNIFIDESRN---VKIGDFGLAKNVHRS 169

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           R+++  +D++H+   +HRD+KP+N L+     G  V + DFGLA+
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVKLADFGLAR 160

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 12/76 (15%)
Query: 10  CLVFPYSYGTK-----SGEQISTGKEDR----EWIGRIDYIHSRNFIHRDIKPDNFLMGL 60
           C V  Y+ G +     S E++ T +  R    E +  ++Y+HSR+ ++RDIK +N +  L
Sbjct: 86  CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLM--L 143
Query: 61  GKRGNLVYIIDFGLAK 76
            K G+ + I DFGL K
Sbjct: 144 DKDGH-IKITDFGLCK 158

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 12/76 (15%)
Query: 10  CLVFPYSYGTK-----SGEQISTGKEDR----EWIGRIDYIHSRNFIHRDIKPDNFLMGL 60
           C V  Y+ G +     S E++ T +  R    E +  ++Y+HSR+ ++RDIK +N +  L
Sbjct: 81  CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLM--L 138
Query: 61  GKRGNLVYIIDFGLAK 76
            K G+ + I DFGL K
Sbjct: 139 DKDGH-IKITDFGLCK 153

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           ++ +  + Y HS++ +H+D+KP+N L       + + IIDFGLA+
Sbjct: 131 KQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           R+++  +D++H+   +HRD+KP+N L+     G  V + DFGLA+
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVKLADFGLAR 160

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           R+++  +D++H+   +HRD+KP+N L+     G  V + DFGLA+
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVKLADFGLAR 160

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIG 96
           ++H  N++H D+KP+N +M   KR N + +IDFGL  ++   P     VTT T    
Sbjct: 270 HMHENNYVHLDLKPEN-IMFTTKRSNELKLIDFGLTAHL--DPKQSVKVTTGTAEFA 323

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           R+++  +D++H+   +HRD+KP+N L+     G  V + DFGLA+
Sbjct: 127 RQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVKLADFGLAR 168

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIG 96
           ++H  N++H D+KP+N +M   KR N + +IDFGL  ++   P     VTT T    
Sbjct: 164 HMHENNYVHLDLKPEN-IMFTTKRSNELKLIDFGLTAHL--DPKQSVKVTTGTAEFA 217

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++++ SR  IHRD+   N L+      N+V I DFGLA+++   P Y R
Sbjct: 157 MEFLASRKXIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVR 202

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ 91
           + Y+HS   IHRD+KP N L+        + I DFG+A+ + +SP+  ++  T+
Sbjct: 171 LKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTE 221

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ 91
           + Y+HS   IHRD+KP N L+        + I DFG+A+ + +SP+  ++  T+
Sbjct: 172 LKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTE 222

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 12/76 (15%)
Query: 10  CLVFPYSYGTK-----SGEQISTGKEDR----EWIGRIDYIHSRNFIHRDIKPDNFLMGL 60
           C V  Y+ G +     S E++ T +  R    E +  ++Y+HSR+ ++RDIK +N +  L
Sbjct: 81  CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLM--L 138
Query: 61  GKRGNLVYIIDFGLAK 76
            K G+ + I DFGL K
Sbjct: 139 DKDGH-IKITDFGLCK 153

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 12/76 (15%)
Query: 10  CLVFPYSYGTK-----SGEQISTGKEDR----EWIGRIDYIHSRNFIHRDIKPDNFLMGL 60
           C V  Y+ G +     S E++ T +  R    E +  ++Y+HSR+ ++RDIK +N +  L
Sbjct: 84  CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLM--L 141
Query: 61  GKRGNLVYIIDFGLAK 76
            K G+ + I DFGL K
Sbjct: 142 DKDGH-IKITDFGLCK 156

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 12/76 (15%)
Query: 10  CLVFPYSYGTK-----SGEQISTGKEDR----EWIGRIDYIHSRNFIHRDIKPDNFLMGL 60
           C V  Y+ G +     S E++ T +  R    E +  ++Y+HSR+ ++RDIK +N +  L
Sbjct: 81  CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLM--L 138
Query: 61  GKRGNLVYIIDFGLAK 76
            K G+ + I DFGL K
Sbjct: 139 DKDGH-IKITDFGLCK 153

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           +++ H    +HRD+KP+N L+    +G  V + DFGLA  V
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV 156

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 12/76 (15%)
Query: 10  CLVFPYSYGTK-----SGEQISTGKEDR----EWIGRIDYIHSRNFIHRDIKPDNFLMGL 60
           C V  Y+ G +     S E++ T +  R    E +  ++Y+HSR+ ++RDIK +N +  L
Sbjct: 81  CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLM--L 138
Query: 61  GKRGNLVYIIDFGLAK 76
            K G+ + I DFGL K
Sbjct: 139 DKDGH-IKITDFGLCK 153

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           RE +  ++++HS   IHRDIK DN L+G+      V + DFG    +    S
Sbjct: 124 RECLQALEFLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQS 172

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+H    IHRD+KP+N L+   +   L+ I DFG +K
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+H    IHRD+KP+N L+   +   L+ I DFG +K
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+H    IHRD+KP+N L+   +   L+ I DFG +K
Sbjct: 126 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 164

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+H    IHRD+KP+N L+   +   L+ I DFG +K
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+H    IHRD+KP+N L+   +   L+ I DFG +K
Sbjct: 133 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 171

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 12/76 (15%)
Query: 10  CLVFPYSYGTK-----SGEQISTGKEDR----EWIGRIDYIHSRNFIHRDIKPDNFLMGL 60
           C V  Y+ G +     S E++ T +  R    E +  ++Y+HSR+ ++RDIK +N +  L
Sbjct: 81  CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLM--L 138
Query: 61  GKRGNLVYIIDFGLAK 76
            K G+ + I DFGL K
Sbjct: 139 DKDGH-IKITDFGLCK 153

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++++ SR  IHRD+   N L+      N+V I DFGLA+++   P Y R
Sbjct: 163 MEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVR 208

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++++ SR  IHRD+   N L+      N+V I DFGLA+++   P Y R
Sbjct: 161 MEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVR 206

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           + H    +HRD+KP+N L+    +G  V + DFGLA  V
Sbjct: 118 HCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEV 156

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++++ SR  IHRD+   N L+      N+V I DFGLA+++   P Y R
Sbjct: 157 MEFLASRKXIHRDLAARNILL---SEKNVVKIXDFGLARDIYKDPDYVR 202

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++++ SR  IHRD+   N L+      N+V I DFGLA+++   P Y R
Sbjct: 198 MEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVR 243

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           +++ H    +HRD+KP+N L+    +G  V + DFGLA  V
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV 156

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           ++ +  + Y H  N  HRD+KP+NFL       + + +IDFGLA
Sbjct: 113 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           ++ +  + Y H  N  HRD+KP+NFL       + + +IDFGLA
Sbjct: 130 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 173

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++++ SR  IHRD+   N L+      N+V I DFGLA+++   P Y R
Sbjct: 152 MEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVR 197

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++++ SR  IHRD+   N L+      N+V I DFGLA+++   P Y R
Sbjct: 152 MEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVR 197

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++++ SR  IHRD+   N L+      N+V I DFGLA+++   P Y R
Sbjct: 213 MEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVR 258

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++++ SR  IHRD+   N L+      N+V I DFGLA+++   P Y R
Sbjct: 204 MEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVR 249

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++++ SR  IHRD+   N L+      N+V I DFGLA+++   P Y R
Sbjct: 206 MEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVR 251

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+H    IHRD+KP+N L+   +   L+ I DFG +K
Sbjct: 266 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 304

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++++ SR  IHRD+   N L+      N+V I DFGLA+++   P Y R
Sbjct: 211 MEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVR 256

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+H    IHRD+KP+N L+   +   L+ I DFG +K
Sbjct: 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG 73
           +D IHS  FIHRD+KPDN L  L K G+L  + DFG
Sbjct: 186 LDAIHSMGFIHRDVKPDNML--LDKSGHL-KLADFG 218

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG 73
           +D IHS  FIHRD+KPDN L  L K G+L  + DFG
Sbjct: 186 LDAIHSMGFIHRDVKPDNML--LDKSGHL-KLADFG 218

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           Y+H++++IHR++   N L+       LV I DFGLAK VP    Y R
Sbjct: 132 YLHAQHYIHRNLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYR 175

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG 73
           +D IHS  FIHRD+KPDN L  L K G+L  + DFG
Sbjct: 181 LDAIHSMGFIHRDVKPDNML--LDKSGHL-KLADFG 213

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYR 192

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+H    +HRD+KP+N L    +  + + I DFGL+K
Sbjct: 119 VKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 12/58 (20%)
Query: 23  EQISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS 80
           EQI+ G         +DYIHS+  IHRD+KP N  +   K+   V I DFGL  ++ +
Sbjct: 143 EQITKG---------VDYIHSKKLIHRDLKPSNIFLVDTKQ---VKIGDFGLVTSLKN 188

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYR 192

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN-VPSSPS 83
           + +IHS    HRDIKP N L+    + N + + DFG AK  +PS PS
Sbjct: 154 VGFIHSLGICHRDIKPQNLLV--NSKDNTLKLCDFGSAKKLIPSEPS 198

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYR 185

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYR 192

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYR 192

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS-SPSYERHVTTQTTR 94
           ++Y+H    +HRD+KP+N L+       ++ + DFGLAK+  S + +Y   V T+  R
Sbjct: 125 LEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYR 179

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 186

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           + Y+H++++IHR +   N L+       LV I DFGLAK VP    Y R
Sbjct: 125 MAYLHAQHYIHRALAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYR 170

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           R+ +  + Y H  N IHRD+KP+N L+   +    V + DFG+A
Sbjct: 137 RQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA 180

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 186

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 193

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           + Y+H++++IHR +   N L+       LV I DFGLAK VP    Y R
Sbjct: 124 MAYLHAQHYIHRALAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYR 169

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 185

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 230

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 186

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 144 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 197

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 193

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 138 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 191

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 193

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 230

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
           Y+H++++IHRD+   N L+       LV I DFGLAK VP
Sbjct: 149 YLHAQHYIHRDLAARNVLL---DNDRLVKIGDFGLAKAVP 185

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL--AKNVPSSPSYERHVTT 90
           Y H +  +HRD+KP N L  + +RG L  + DFGL  AK++P+  +Y+  V T
Sbjct: 115 YCHRQKVLHRDLKPQNLL--INERGEL-KLADFGLARAKSIPTK-TYDNEVVT 163

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + + HSRN +HRD+KP N L+    R   + + DFGLA+
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLIN---RNGELKLADFGLAR 149

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           ++ +  I Y+H  N +HRDIKP+N L+        + I+DFGL+
Sbjct: 153 KQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           +DY+H++N IHRD+K +N  +     G  V I DFGLA
Sbjct: 145 MDYLHAKNIIHRDMKSNNIFL---HEGLTVKIGDFGLA 179

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG 73
           E +  ID +H  +++HRDIKPDN LM +      + + DFG
Sbjct: 183 EMVIAIDSVHQLHYVHRDIKPDNILMDMNGH---IRLADFG 220

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 38.5 bits (88), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 1   VKPFRSTQSCLVFPYSYGT--KSGEQISTGKEDR----EWIGRIDYIHSRNFIHRDIKPD 54
           VK   S    LVF Y   T  K   QI T  + R    E +  +DY HS+  +HRD+KP 
Sbjct: 102 VKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPH 161
Query: 55  NFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ 91
           N ++   ++   + +ID+GLA+    +  Y   V ++
Sbjct: 162 NVMIDHQQKK--LRLIDWGLAEFYHPAQEYNVRVASR 196

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 38.5 bits (88), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           ++ I  I+Y+H +  IHRDIKP N L+G       + I DFG++     S
Sbjct: 144 QDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNEFKGS 190

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 38.5 bits (88), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   ++     +V T+  R
Sbjct: 137 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTASTNFMMTPYVVTRYYR 190

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + YIHS N +HRD+KP N L+        + I DFGLA+
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTSD---LKICDFGLAR 174

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           E +  ++Y+H +  IHRD+KP+N L+        + I DFG AK
Sbjct: 118 EIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAK 158

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           E +  ++Y+H +  IHRD+KP+N L+        + I DFG AK
Sbjct: 145 EIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAK 185

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 33  EWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           E +  ++Y+H +  IHRD+KP+N L+        + I DFG AK
Sbjct: 117 EIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAK 157

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 1   VKPFRSTQSCLVFPYSYGT--KSGEQISTGKEDR----EWIGRIDYIHSRNFIHRDIKPD 54
           VK   S    LVF Y   T  K   QI T  + R    E +  +DY HS+  +HRD+KP 
Sbjct: 107 VKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPH 166
Query: 55  NFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ 91
           N ++   ++   + +ID+GLA+    +  Y   V ++
Sbjct: 167 NVMIDHQQKK--LRLIDWGLAEFYHPAQEYNVRVASR 201

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	99
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	2e-21
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	5e-21
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	9e-21
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	1e-20
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	2e-20
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	1e-19
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	2e-18
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-13
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-12
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-12
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-12
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-12
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-12
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-11
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-11
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-11
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-11
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	6e-11
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	6e-11
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	7e-11
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	7e-11
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	7e-11
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	7e-11
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	8e-11
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	9e-11
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	9e-11
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-10
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-10
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-10
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-10
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-10
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-10
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-10
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-10
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-10
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-10
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-10
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-10
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-10
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-10
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-10
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-10
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-10
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-10
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-10
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-10
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-10
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-10
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-10
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-10
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	3e-10
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-10
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-10
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	5e-10
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	6e-10
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	6e-10
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	7e-10
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	7e-10
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	7e-10
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	7e-10
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	8e-10
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	8e-10
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	8e-10
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	9e-10
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-09
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-09
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-09
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-09
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-09
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-09
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-09
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-09
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-09
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-09
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-09
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-09
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-09
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-09
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-09
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-09
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-09
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-09
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-09
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-09
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-09
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-09
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-09
3o0g_A	292	Cell division protein kinase 5; kinase activator c	3e-09
3niz_A	311	Rhodanese family protein; structural genomics, str	4e-09
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-09
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	4e-09
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-09
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-09
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	4e-09
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	5e-09
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	5e-09
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	5e-09
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	6e-09
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	7e-09
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	7e-09
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	7e-09
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	8e-09
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	9e-09
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	9e-09
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-08
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-08
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-08
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-08
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-08
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-08
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-08
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-08
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-08
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-08
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-08
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-08
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-08
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	3e-08
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-08
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-08
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	4e-08
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-08
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-08
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	5e-08
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	5e-08
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	5e-08
3rp9_A	458	Mitogen-activated protein kinase; structural genom	5e-08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	6e-08
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-08
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	7e-08
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-08
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	8e-08
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-07
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-07
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-07
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-07
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-07
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-07
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-07
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-07
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-07
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-07
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-07
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-07
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-07
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-07
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-07
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-07
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-07
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-07
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-07
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-07
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-07
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-07
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-07
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	3e-07
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-07
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-07
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	5e-07
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	6e-07
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-06
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-06
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-06
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-06
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-06
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-06
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-06
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-06
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-06
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-06
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	4e-06
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-06
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	5e-06
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	5e-06
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	6e-06
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	6e-06
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	6e-06
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	6e-06
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	7e-06
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	8e-06
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	9e-06
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-05
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-05
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-05
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-05
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-05
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-05
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-05
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-05
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-05
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-05
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-05
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-05
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	2e-05
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-05
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-05
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-05
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-05
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-05
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-05
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	3e-05
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-05
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-05
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	3e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-05
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-05
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-05
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	5e-05
3pls_A	298	Macrophage-stimulating protein receptor; protein k	5e-05
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-05
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	6e-05
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	6e-05
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	6e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	7e-05
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	8e-05
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	9e-05
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-04
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-04
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-04
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-04
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-04
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-04
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	5e-04
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	6e-04

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 85.1 bits (211), Expect = 2e-21
 Identities = 23/44 (52%), Positives = 34/44 (77%), Gaps = 2/44 (4%)

Query: 35  IGRIDYIHSRNFIHRDIKPDNFLMGLG--KRGNLVYIIDFGLAK 76
           I R++Y+HS+N I+RD+KP+NFL+G    K   +++IIDF LAK
Sbjct: 115 ISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 83.2 bits (206), Expect = 5e-21
 Identities = 20/44 (45%), Positives = 32/44 (72%), Gaps = 2/44 (4%)

Query: 35  IGRIDYIHSRNFIHRDIKPDNFLMGL--GKRGNLVYIIDFGLAK 76
           + R+  IH ++ ++RDIKPDNFL+G    K  N++Y++DFG+ K
Sbjct: 116 LARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 83.3 bits (206), Expect = 9e-21
 Identities = 6/42 (14%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 35  IGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           +  ++++H   ++H ++  +N  +    + + V +  +G A 
Sbjct: 169 LDALEFLHENEYVHGNVTAENIFVDPEDQ-SQVTLAGYGFAF 209

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 83.3 bits (206), Expect = 1e-20
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 35  IGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           +  ++YIH   ++H DIK  N L+      + VY++D+GLA 
Sbjct: 162 LDILEYIHEHEYVHGDIKASNLLLNYKN-PDQVYLVDYGLAY 202

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 82.1 bits (203), Expect = 2e-20
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 35  IGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           +  ++YIH   ++H DIK  N L+G     + VY+ D+GL+ 
Sbjct: 161 LDVLEYIHENEYVHGDIKAANLLLGYKNP-DQVYLADYGLSY 201

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 80.1 bits (198), Expect = 1e-19
 Identities = 37/42 (88%), Positives = 41/42 (97%)

Query: 35  IGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           I RI+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK
Sbjct: 115 ISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 77.4 bits (190), Expect = 2e-18
 Identities = 31/42 (73%), Positives = 39/42 (92%)

Query: 35  IGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           I R++++HS++F+HRDIKPDNFLMGLG+R N VYIIDFGLAK
Sbjct: 113 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 62.3 bits (152), Expect = 3e-13
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 11/67 (16%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ------ 91
           + YIHS+  IHRD+KP N    + +  N V I DFGLAKNV  S    +  +        
Sbjct: 129 LSYIHSQGIIHRDLKPMNIF--IDESRN-VKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185

Query: 92  --TTRIG 96
             T+ IG
Sbjct: 186 NLTSAIG 192

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 60.9 bits (148), Expect = 1e-12
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 10/57 (17%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVY-IIDFGLAKNVPS---------SPSY 84
           ++++     +HR+IKP N +  +G+ G  VY + DFG A+ +           +  Y
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEY 181

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 61.0 bits (148), Expect = 1e-12
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 10/57 (17%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVY-IIDFGLAKNVPS---------SPSY 84
           ++++     +HR+IKP N +  +G+ G  VY + DFG A+ +           +  Y
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEY 181

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 60.4 bits (146), Expect = 2e-12
 Identities = 8/39 (20%), Positives = 18/39 (46%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           +  +H    +H  ++P + +  L +RG  V++  F    
Sbjct: 219 LASLHHYGLVHTYLRPVDIV--LDQRGG-VFLTGFEHLV 254

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 59.7 bits (144), Expect = 3e-12
 Identities = 8/44 (18%), Positives = 15/44 (34%), Gaps = 3/44 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
              + S+  +H    PDN    +   G  + + D      V + 
Sbjct: 207 AANLQSKGLVHGHFTPDNLF--IMPDGR-LMLGDVSALWKVGTR 247

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 59.7 bits (144), Expect = 4e-12
 Identities = 8/39 (20%), Positives = 18/39 (46%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           +  +H    +H  ++P + +  L +RG  V++  F    
Sbjct: 224 LASLHHYGLVHTYLRPVDIV--LDQRGG-VFLTGFEHLV 259

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 57.3 bits (139), Expect = 2e-11
 Identities = 16/39 (41%), Positives = 24/39 (61%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+H    IHRD+KP+N L+   +   L+ I DFG +K
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 57.5 bits (139), Expect = 2e-11
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQT 92
           + Y+H++   HRDIKP+NFL     +   + ++DFGL+K      + E +  T  
Sbjct: 181 LHYLHNQGICHRDIKPENFLF-STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTK 234

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 3/44 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           + Y HS+  IHRDIKP+N L  LG  G L  I DFG + + PSS
Sbjct: 122 LSYCHSKRVIHRDIKPENLL--LGSAGELK-IADFGWSVHAPSS 162

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 56.6 bits (137), Expect = 3e-11
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 9/56 (16%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS---------SPSY 84
           + Y+H    IHRD+KP+N L+   +   L+ I DFG +K +           +P+Y
Sbjct: 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 307

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 56.1 bits (136), Expect = 6e-11
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + ++HS N  H DI+P+N +    +R + + II+FG A+
Sbjct: 115 LQFLHSHNIGHFDIRPENIIY-QTRRSSTIKIIEFGQAR 152

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 56.2 bits (135), Expect = 6e-11
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 9/56 (16%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS---------SPSY 84
           + Y+H    IHRD+KP+N ++  G +  +  IID G AK +           +  Y
Sbjct: 134 LRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQY 189

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 55.7 bits (135), Expect = 7e-11
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 9/55 (16%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQT 92
           +D  H+    HRD+KP+N L  +       Y++DFG+A              TQ 
Sbjct: 147 LDAAHAAGATHRDVKPENIL--VSADDF-AYLVDFGIASATTDEK------LTQL 192

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 55.7 bits (135), Expect = 7e-11
 Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 3/44 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           + Y H R  IHRDIKP+N L  +G +G L  I DFG + + PS 
Sbjct: 127 LHYCHERKVIHRDIKPENLL--MGYKGELK-IADFGWSVHAPSL 167

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 55.8 bits (135), Expect = 7e-11
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS 80
           +  IH    +H D+KP NFL+     G L  +IDFG+A  +  
Sbjct: 140 VHTIHQHGIVHSDLKPANFLI---VDGML-KLIDFGIANQMQP 178

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 55.7 bits (135), Expect = 7e-11
 Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 5/56 (8%)

Query: 35  IGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           +    Y+H    IHRD+K  N    L +    V I DFGLA         ER    
Sbjct: 125 VLGCQYLHRNRVIHRDLKLGNLF--LNEDLE-VKIGDFGLA-TKVEYDG-ERKKVL 175

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 55.4 bits (134), Expect = 8e-11
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           + ++HS+  +H D+KP N    LG RG    + DFGL   + ++
Sbjct: 170 LAHLHSQGLVHLDVKPANIF--LGPRGR-CKLGDFGLLVELGTA 210

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 55.4 bits (134), Expect = 9e-11
 Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 5/56 (8%)

Query: 35  IGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           +    Y+H    IHRD+K  N    L +   +  I DFGLA         ER    
Sbjct: 151 VLGCQYLHRNRVIHRDLKLGNLF--LNEDLEV-KIGDFGLA-TKVEYDG-ERKKVL 201

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 55.4 bits (134), Expect = 9e-11
 Identities = 17/41 (41%), Positives = 24/41 (58%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           I Y+HS N  HRD+KP+N L    +   ++ + DFG AK  
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 170

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 55.5 bits (134), Expect = 1e-10
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + ++H  + +H DIKP+N +    K+ + V IIDFGLA 
Sbjct: 162 LKHMHEHSIVHLDIKPENIMC-ETKKASSVKIIDFGLAT 199

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 55.5 bits (134), Expect = 1e-10
 Identities = 17/53 (32%), Positives = 31/53 (58%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           + Y+H  N +HRD+KP+N L+   ++  L+ I+DFGL+    +    +  + T
Sbjct: 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGT 201

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 55.5 bits (134), Expect = 1e-10
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQT 92
           +Y+H+R  +H D+K DN L  L   G+   + DFG A  +      +  +T   
Sbjct: 164 EYLHTRRILHGDVKADNVL--LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 55.5 bits (134), Expect = 1e-10
 Identities = 18/53 (33%), Positives = 30/53 (56%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           I Y+H    +HRD+KP+N L+    +   + IIDFGL+ +  +S   +  + T
Sbjct: 139 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 191

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 55.3 bits (134), Expect = 1e-10
 Identities = 16/39 (41%), Positives = 26/39 (66%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y HS++ +H+D+KP+N L       + + IIDFGLA+
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 55.3 bits (134), Expect = 1e-10
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           I Y+H  N +HRD+KP+N L+   ++   + IIDFGL+ 
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 55.3 bits (134), Expect = 1e-10
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           ++Y+H +  IHRD+KP+N L  L +  ++  I DFG AK +       R
Sbjct: 143 LEYLHGKGIIHRDLKPENIL--LNEDMHIQ-ITDFGTAKVLSPESKQAR 188

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 55.1 bits (133), Expect = 1e-10
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           I ++H    +H D+KP+N L  + +    + IIDFGLA+
Sbjct: 200 IRHMHQMYILHLDLKPENILC-VNRDAKQIKIIDFGLAR 237

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 55.2 bits (133), Expect = 1e-10
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS 80
           +  IH    +H D+KP NFL+     G L  +IDFG+A  +  
Sbjct: 168 VHTIHQHGIVHSDLKPANFLI---VDGML-KLIDFGIANQMQP 206

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 55.1 bits (133), Expect = 1e-10
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGR 97
           ++++HS+  +HRD+KP N           V + DFGL   +      +  +T        
Sbjct: 131 VEFLHSKGLMHRDLKPSNIF--FTMDDV-VKVGDFGLVTAMDQDEEEQTVLTPMPAYARH 187

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 55.0 bits (133), Expect = 1e-10
 Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 3/42 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
           +DY+ ++  IHRD+KPDN L  L + G+ V+I DF +A  +P
Sbjct: 128 LDYLQNQRIIHRDMKPDNIL--LDEHGH-VHITDFNIAAMLP 166

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 55.1 bits (133), Expect = 1e-10
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS 80
           +  IH    +H D+KP NFL+     G L  +IDFG+A  +  
Sbjct: 121 VHTIHQHGIVHSDLKPANFLI---VDGML-KLIDFGIANQMQP 159

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 35  IGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           I  + Y+HS   +HRD+   N L  L +  N+  I DFGLA      P  E+H T 
Sbjct: 122 ITGMLYLHSHGILHRDLTLSNLL--LTRNMNI-KIADFGLA-TQLKMPH-EKHYTL 172

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 55.2 bits (133), Expect = 1e-10
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + ++H  N++H D+KP+N +    KR N + +IDFGL  
Sbjct: 268 LCHMHENNYVHLDLKPENIMF-TTKRSNELKLIDFGLTA 305

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 54.9 bits (132), Expect = 2e-10
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 9/65 (13%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ------ 91
           ++++HS+  +HRD+KP N           V + DFGL   +      +  +T        
Sbjct: 177 VEFLHSKGLMHRDLKPSNIF--FTMDDV-VKVGDFGLVTAMDQDEEEQTVLTPMPAYATH 233

Query: 92  TTRIG 96
           T ++G
Sbjct: 234 TGQVG 238

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 17/39 (43%), Positives = 23/39 (58%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y H  N  HRD+KP+NFL       + + +IDFGLA 
Sbjct: 119 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 157

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 9/56 (16%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS---------SPSY 84
           I Y HS   +HR++KP+N L+    +G  V + DFGLA  V           +P Y
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 173

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 54.7 bits (132), Expect = 2e-10
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           I Y+H  N +HRD+KP+N L+   ++   + IIDFGL+ 
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 8/55 (14%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS--------SPSY 84
           + Y+H    +HRD+KP+N L    +  + + I DFGL+K   +        +P Y
Sbjct: 119 VKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGY 173

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 54.6 bits (132), Expect = 2e-10
 Identities = 18/38 (47%), Positives = 27/38 (71%), Gaps = 3/38 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           I+Y+H +  IHRDIKP N L  +G+ G+ + I DFG++
Sbjct: 150 IEYLHYQKIIHRDIKPSNLL--VGEDGH-IKIADFGVS 184

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 54.6 bits (132), Expect = 2e-10
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           +DYIHS+  I+RD+KP N    L      V I DFGL  
Sbjct: 135 VDYIHSKKLINRDLKPSNIF--LVDTKQ-VKIGDFGLVT 170

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 54.4 bits (131), Expect = 3e-10
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGL-GKRGNL-VYIIDFGLAKNVPSSPSYERHVTT 90
           + ++HS N +HRD+KP N L+ +    G +   I DFGL K +          + 
Sbjct: 131 LAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSG 185

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 54.3 bits (131), Expect = 3e-10
 Identities = 16/45 (35%), Positives = 26/45 (57%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSP 82
           I ++HS N  HRD+KP+N L    ++  ++ + DFG AK    + 
Sbjct: 141 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA 185

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 54.2 bits (131), Expect = 3e-10
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 9/56 (16%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS---------SPSY 84
           I Y HS   +HR++KP+N L+    +G  V + DFGLA  V           +P Y
Sbjct: 141 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 196

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 54.2 bits (131), Expect = 3e-10
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 10/57 (17%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS----------SPSY 84
           + + H    +HR++KP+N L+    +G  V + DFGLA  V            +P Y
Sbjct: 123 VLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGY 179

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 53.9 bits (130), Expect = 3e-10
 Identities = 17/39 (43%), Positives = 24/39 (61%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           I Y+H  N +HRDIKP+N L+        + I+DFGL+ 
Sbjct: 159 ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS 197

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 53.8 bits (130), Expect = 3e-10
 Identities = 13/39 (33%), Positives = 23/39 (58%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+H  N +H D+KP N L+        + I+DFG+++
Sbjct: 144 VYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR 182

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 53.5 bits (129), Expect = 5e-10
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
           + Y H  N IHRD+KP   L+   +    V +  FG+A  + 
Sbjct: 143 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 184

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 53.1 bits (128), Expect = 6e-10
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 5/58 (8%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIG 96
            Y+H++  +H+D+K  N     GK    V I DFGL   +       R       + G
Sbjct: 144 GYLHAKGILHKDLKSKNVFYDNGK----VVITDFGLFS-ISGVLQAGRREDKLRIQNG 196

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 53.1 bits (128), Expect = 6e-10
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+H    +HRD+KP+N L         + I DFGL+K
Sbjct: 161 VAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 53.1 bits (128), Expect = 7e-10
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
           + ++H    +HRD+KP+N L         + IIDFG A+  P
Sbjct: 119 VSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP 160

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 53.0 bits (128), Expect = 7e-10
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           +DY HS   +HRD+KP N ++    R   + +ID+GLA+       Y   V +
Sbjct: 143 LDYCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFYHPGQEYNVRVAS 193

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 53.2 bits (128), Expect = 7e-10
 Identities = 20/53 (37%), Positives = 27/53 (50%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           I Y+HS N  HRD+KP+N L    +   ++ + DFG AK   S  S      T
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 226

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 53.2 bits (128), Expect = 7e-10
 Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 3/44 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           +D IHS  FIHRD+KPDN L  L K G+L  + DFG    +   
Sbjct: 181 LDAIHSMGFIHRDVKPDNML--LDKSGHLK-LADFGTCMKMNKE 221

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 53.1 bits (128), Expect = 8e-10
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 3/41 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGN--LVYIIDFGLAK 76
           ++Y+H++  +HRD+KP N L  + + GN   + I DFG AK
Sbjct: 129 VEYLHAQGVVHRDLKPSNILY-VDESGNPESIRICDFGFAK 168

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 52.9 bits (127), Expect = 8e-10
 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 12/69 (17%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVY----------IIDFGLAKNVPSSPSYERH 87
           + ++HS   IHRD+KP N L+    R               I DFGL K + S  S  R 
Sbjct: 128 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR- 186

Query: 88  VTTQTTRIG 96
            T      G
Sbjct: 187 -TNLNNPSG 194

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 52.8 bits (127), Expect = 8e-10
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQT 92
           ID +H  +++HRDIKPDN L  +   G++  + DFG    +      +  V +  
Sbjct: 188 IDSVHQLHYVHRDIKPDNIL--MDMNGHIR-LADFGSCLKLME----DGTVQSSV 235

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 52.7 bits (127), Expect = 9e-10
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ-TTRIG 96
           +D++H++   HRD+KP+N L     + + V I DF L   +  +       T +  T  G
Sbjct: 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCG 183

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 38  IDYIHSRNFIHRDIKPDNFLM-GLGKRGNLVYIIDFGLAK 76
           + Y+HS+   H D+KP+N ++         + +IDFG+A 
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 52.6 bits (126), Expect = 1e-09
 Identities = 10/41 (24%), Positives = 21/41 (51%), Gaps = 4/41 (9%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           + Y+HS   ++ D+KP+N ++        + +ID G    +
Sbjct: 195 LSYLHSIGLVYNDLKPENIML----TEEQLKLIDLGAVSRI 231

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 4/54 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS-SPSYERHVTT 90
           +++ H  N IHRD+KP+N L+   K   +  + DFG A+ +   S  Y+  V T
Sbjct: 115 VNFCHKHNCIHRDVKPENILI--TKHSVI-KLCDFGFARLLTGPSDYYDDEVAT 165

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 52.4 bits (126), Expect = 1e-09
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           ++ IH++ + HRD+KP N L  LG  G  V ++D G          
Sbjct: 147 LEAIHAKGYAHRDLKPTNIL--LGDEGQPV-LMDLGSMNQACIHVE 189

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 52.3 bits (126), Expect = 1e-09
 Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 3/41 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNL--VYIIDFGLAK 76
           ++Y+H++   H D+KP+N ++ L K   +  + +IDFGLA 
Sbjct: 128 VNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAH 167

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 52.0 bits (125), Expect = 1e-09
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 4/45 (8%)

Query: 38  IDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
             YIH+ +N  HRD+KP N L  + K G +  + DFG ++ +   
Sbjct: 164 FSYIHNEKNICHRDVKPSNIL--MDKNGRVK-LSDFGESEYMVDK 205

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 52.0 bits (125), Expect = 2e-09
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           ID +H   ++HRDIKPDN L  L + G++  + DFG   
Sbjct: 175 IDSVHRLGYVHRDIKPDNIL--LDRCGHIR-LADFGSCL 210

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 4/54 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS-SPSYERHVTT 90
           I + HS N IHRDIKP+N L+   + G +  + DFG A+ + +    Y+  V T
Sbjct: 137 IGFCHSHNIIHRDIKPENILV--SQSGVV-KLCDFGFARTLAAPGEVYDDEVAT 187

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           +D++HS   +HRD+KP N L+     G +  + DFGLA+      +    V T
Sbjct: 133 LDFLHSHRVVHRDLKPQNILV--TSSGQI-KLADFGLARIYSFQMALTSVVVT 182

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 51.9 bits (125), Expect = 2e-09
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 12/56 (21%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS---------SPSY 84
           I  +H  N +HRD+KP+N L  L    N+  + DFG +  +           +PSY
Sbjct: 137 ICALHKLNIVHRDLKPENIL--LDDDMNIK-LTDFGFSCQLDPGEKLREVCGTPSY 189

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           +D++H+   +HRD+KP+N L+     G +  + DFGLA+      +    V T
Sbjct: 133 LDFLHANCIVHRDLKPENILV--TSGGTV-KLADFGLARIYSYQMALTPVVVT 182

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 52.0 bits (125), Expect = 2e-09
 Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 3/41 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNL--VYIIDFGLAK 76
           ++Y+H++   H D+KP+N ++ L K   +  + +IDFGLA 
Sbjct: 128 VNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAH 167

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 51.6 bits (124), Expect = 2e-09
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           + ++H R  +HRDIK  N  +    +   V + DFG+A+ + S+   
Sbjct: 138 LKHVHDRKILHRDIKSQNIFLT---KDGTVQLGDFGIARVLNSTVEL 181

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 51.5 bits (124), Expect = 2e-09
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           ++Y+HS+  +H+DIKP N L  L   G L  I   G+A
Sbjct: 122 LEYLHSQGIVHKDIKPGNLL--LTTGGTL-KISALGVA 156

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 51.5 bits (124), Expect = 2e-09
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           + YIH    +HRD+K  N L+   + G L  + DFGLA
Sbjct: 137 LYYIHRNKILHRDMKAANVLI--TRDGVL-KLADFGLA 171

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 51.5 bits (124), Expect = 2e-09
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           + Y+H    +HRDIK DN L  +     ++ I DFG +K +
Sbjct: 135 LKYLHDNQIVHRDIKGDNVL--INTYSGVLKISDFGTSKRL 173

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 51.6 bits (124), Expect = 2e-09
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           + ++H+ N +HRD+KP+N L  L     +  + DFG + ++
Sbjct: 213 VSFLHANNIVHRDLKPENIL--LDDNMQIR-LSDFGFSCHL 250

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 51.5 bits (124), Expect = 2e-09
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 3/38 (7%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           DY+H+++ IHRD+K +N  +      N V I DFGLA 
Sbjct: 134 DYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLAT 168

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA--KNVPSSP 82
           + + H    +HRD+KP N L+   KRG L  + DFGLA    +P + 
Sbjct: 121 LAFCHENKILHRDLKPQNLLI--NKRGQL-KLGDFGLARAFGIPVNT 164

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 51.5 bits (124), Expect = 2e-09
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKR-GNLVYIIDFGLAK 76
           + Y+HS    H D+KP+N ++         + IIDFGLA 
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + + HS   +HRD+KP N L+     G +  + DFGLA+
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLI--NTEGAI-KLADFGLAR 151

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 51.5 bits (123), Expect = 3e-09
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 12/67 (17%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMG--------LGKRGNLVYIIDFGLAKNVPSSPSYERHVT 89
           I+ +H    IH DIKPDNF++G               + +ID G + ++   P      T
Sbjct: 185 IEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPK----GT 240

Query: 90  TQTTRIG 96
             T +  
Sbjct: 241 IFTAKCE 247

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 51.1 bits (123), Expect = 3e-09
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           + Y H +  +HRD+K +N L  L    N + I DFG +
Sbjct: 127 VQYCHQKRIVHRDLKAENLL--LDADMN-IKIADFGFS 161

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + + HSRN +HRD+KP N L+   + G L  + +FGLA+
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLI--NRNGEL-KLANFGLAR 149

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + + H    +HRD+KP N L+     G L  + DFGLA+
Sbjct: 132 VAHCHQHRILHRDLKPQNLLI--NSDGAL-KLADFGLAR 167

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 50.7 bits (122), Expect = 4e-09
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 7/58 (12%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRI 95
           +++ H    IHRD+KP N ++        V ++DFG+A+ +  S +      TQT  +
Sbjct: 129 LNFSHQNGIIHRDVKPANIMI--SATNA-VKVMDFGIARAIADSGN----SVTQTAAV 179

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 50.7 bits (122), Expect = 4e-09
 Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 35  IGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           +  + Y+H     HRDIKP+N L  L +R NL  I DFGLA  V    + ER +  
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLL--LDERDNL-KISDFGLA-TVFRYNNRERLLNK 166

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 50.6 bits (122), Expect = 4e-09
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           I Y H R  +HRD+KP N L+   + G L  I DFGLA+
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLI--NREGEL-KIADFGLAR 148

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 50.9 bits (122), Expect = 4e-09
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           YIHS    HRDIKP N L  L     ++ + DFG AK +        ++ +
Sbjct: 171 YIHSFGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 219

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 50.7 bits (122), Expect = 5e-09
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 9/58 (15%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRI 95
           I + H    +HRDIKP N L+        + I DFG+AK +  +        TQT  +
Sbjct: 124 IKHAHDMRIVHRDIKPQNILI--DSNKT-LKIFDFGIAKALSETS------LTQTNHV 172

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 50.7 bits (122), Expect = 5e-09
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)

Query: 38  IDYIHSRNFIHRDIKPDNFLM---GLGKRGNLVYIIDFGLAK 76
           +++ HSR  +HRD+KP N L+      +   L  I DFGLA+
Sbjct: 145 VNFCHSRRCLHRDLKPQNLLLSVSDASETPVL-KIGDFGLAR 185

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 21/42 (50%), Positives = 31/42 (73%), Gaps = 3/42 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
           ++Y+HS++ I+RD+KP+N L  L K G++  I DFG AK VP
Sbjct: 119 LEYLHSKDIIYRDLKPENIL--LDKNGHIK-ITDFGFAKYVP 157

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 50.4 bits (121), Expect = 6e-09
 Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 3/43 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS 80
            +Y+HS + I+RD+KP+N L  + ++G +  + DFG AK V  
Sbjct: 154 FEYLHSLDLIYRDLKPENLL--IDQQGYIQ-VTDFGFAKRVKG 193

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 50.3 bits (121), Expect = 7e-09
 Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           ++Y+H    +HRD+KP+N L+   + G L  + DFGLAK
Sbjct: 125 LEYLHQHWILHRDLKPNNLLL--DENGVL-KLADFGLAK 160

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 50.3 bits (121), Expect = 7e-09
 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y H +  +HRD+KP N L+   +RG L  + DFGLA+
Sbjct: 113 LAYCHRQKVLHRDLKPQNLLI--NERGEL-KLADFGLAR 148

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 50.0 bits (120), Expect = 7e-09
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSP 82
           I + HSR  +HRDIK +N L  +  R     +IDFG    +   P
Sbjct: 152 IQHCHSRGVVHRDIKDENIL--IDLRRGCAKLIDFGSGALLHDEP 194

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 50.0 bits (120), Expect = 8e-09
 Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 35  IGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           +  + Y+H     HRDIKP+N L  L +R NL  I DFGLA  V    + ER +  
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLL--LDERDNL-KISDFGLA-TVFRYNNRERLLNK 166

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 50.0 bits (120), Expect = 9e-09
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 38  IDYIHSRN---FIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           + Y+HS      IHRD+KP N L  L   G ++ I DFG A ++ + 
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLL--LVAGGTVLKICDFGTACDIQTH 159

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 50.0 bits (120), Expect = 9e-09
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           + YIHS    HRDIKP N L  L     ++ +IDFG AK + +    
Sbjct: 154 LAYIHSIGICHRDIKPQNLL--LDPPSGVLKLIDFGSAKILIAGEPN 198

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 49.7 bits (119), Expect = 1e-08
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 3/44 (6%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           R+ +  + Y+  ++ IHRDIK +N +  + +    + +IDFG A
Sbjct: 137 RQLVSAVGYLRLKDIIHRDIKDENIV--IAEDFT-IKLIDFGSA 177

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 49.8 bits (119), Expect = 1e-08
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ 91
           ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+
Sbjct: 179 HLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTR 227

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 49.6 bits (119), Expect = 1e-08
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGR 97
           Y+HS N IHRD+   N L+        V + DFGLA+ +    +    + +      +
Sbjct: 123 YLHSMNIIHRDLNSHNCLVR---ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRK 177

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 49.6 bits (119), Expect = 1e-08
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
            +H    +HRD+ P N L+      N + I DF LA+   +  +   +VT 
Sbjct: 149 VLHEAGVVHRDLHPGNILL---ADNNDITICDFNLAREDTADANKTHYVTH 196

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 49.3 bits (118), Expect = 1e-08
 Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 12/63 (19%)

Query: 24  QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           QI  G           Y+H++++IHRD+   N L+       LV I DFGLAK VP    
Sbjct: 142 QICEGMA---------YLHAQHYIHRDLAARNVLLD---NDRLVKIGDFGLAKAVPEGHE 189

Query: 84  YER 86
           Y R
Sbjct: 190 YYR 192

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 49.3 bits (118), Expect = 1e-08
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y HS    HRD+K +N L+       L  I DFG +K
Sbjct: 129 VSYCHSMQICHRDLKLENTLLDGSPAPRL-KICDFGYSK 166

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 48.9 bits (117), Expect = 2e-08
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           + + H+   +HRDIK +N L+    RG  + +IDFG  
Sbjct: 162 VRHCHNCGVLHRDIKDENILID-LNRGE-LKLIDFGSG 197

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 48.8 bits (117), Expect = 2e-08
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           ++++HSR  +HRDIKP N    +   G  V + D GL +   S 
Sbjct: 149 LEHMHSRRVMHRDIKPANVF--ITATGV-VKLGDLGLGRFFSSK 189

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 48.9 bits (117), Expect = 2e-08
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N +  +     L  I+DFGLA+   +S     +V T+  R
Sbjct: 140 IKHLHSAGIIHRDLKPSNIV--VKSDCTLK-ILDFGLARTAGTSFMMTPYVVTRYYR 193

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 48.8 bits (117), Expect = 2e-08
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 16/67 (23%)

Query: 38  IDYIHSRN---FIHRDIKPDNFLMG-----LGKRGNLVYIIDFGLAKNVPSSPSYERHVT 89
           ++Y+H       IHRD+K  N L+            ++ I DFGLA+        E H T
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--------EWHRT 169

Query: 90  TQTTRIG 96
           T+ +  G
Sbjct: 170 TKMSAAG 176

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 35  IGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           +  +DY H    +HRD+KP+N L  L    N   I DFGL+
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVL--LDAHMNA-KIADFGLS 158

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 48.8 bits (117), Expect = 2e-08
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 3/38 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           I+Y H    +HRD+KP+N L  L    N V I DFGL+
Sbjct: 121 IEYCHRHKIVHRDLKPENLL--LDDNLN-VKIADFGLS 155

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 48.6 bits (116), Expect = 3e-08
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           +IHS    HRDIKP N L+   K   L  + DFG AK
Sbjct: 156 FIHSLGICHRDIKPQNLLVN-SKDNTLK-LCDFGSAK 190

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 48.4 bits (116), Expect = 3e-08
 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVT 89
           YIHS N +HRD+KP N    +     ++ I DFGLA+ +    S++ H++
Sbjct: 135 YIHSANVLHRDLKPANLF--INTEDLVLKIGDFGLARIMDPHYSHKGHLS 182

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 48.6 bits (116), Expect = 3e-08
 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 14/57 (24%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS----------SPSY 84
           +DY H    +HRD+KP+N L  L    N   I DFGL+ N+ S          SP+Y
Sbjct: 129 VDYCHRHMVVHRDLKPENVL--LDAHMN-AKIADFGLS-NMMSDGEFLRTSCGSPNY 181

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 48.3 bits (115), Expect = 3e-08
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 38  IDYIHSRNFIHRDIKPDNFL-MGLGKRGNLVYIIDFGLA 75
           I Y+H+   +HRD+KP N L MG G     V I D G A
Sbjct: 141 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 179

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 48.1 bits (115), Expect = 4e-08
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 12/61 (19%)

Query: 24  QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           QI  G         ++Y+ ++ +IHRD+   N L+      N V I DFGL K +P    
Sbjct: 153 QICKG---------MEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGLTKVLPQDKE 200

Query: 84  Y 84
           Y
Sbjct: 201 Y 201

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 48.1 bits (115), Expect = 4e-08
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 12/61 (19%)

Query: 24  QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           QI  G         ++Y+ ++ +IHRD+   N L+      N V I DFGL K +P    
Sbjct: 122 QICKG---------MEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGLTKVLPQDKE 169

Query: 84  Y 84
           +
Sbjct: 170 F 170

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 48.1 bits (115), Expect = 4e-08
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 3/38 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           ++++HS   IHRDIK DN L  LG  G+ V + DFG  
Sbjct: 129 LEFLHSNQVIHRDIKSDNIL--LGMDGS-VKLTDFGFC 163

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 48.0 bits (115), Expect = 5e-08
 Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           ++Y+HSR+ ++RDIK +N +  L K G+ + I DFGL K
Sbjct: 118 LEYLHSRDVVYRDIKLENLM--LDKDGH-IKITDFGLCK 153

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 47.7 bits (114), Expect = 5e-08
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
              +  + Y+H++  IHRDIK D+ L  L   G  V + DFG  
Sbjct: 148 EAVLQALAYLHAQGVIHRDIKSDSIL--LTLDGR-VKLSDFGFC 188

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 47.9 bits (114), Expect = 5e-08
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP 79
           ++ +H    ++RD+KP+N L  L   G+ + I D GLA +VP
Sbjct: 299 LEDLHRERIVYRDLKPENIL--LDDHGH-IRISDLGLAVHVP 337

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 47.9 bits (114), Expect = 5e-08
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           Y+HS   +HRD+KP N L  + +  ++  + DFGLA+ V    +    +      
Sbjct: 171 YVHSAGILHRDLKPANCL--VNQDCSV-KVCDFGLARTVDYPENGNSQLPISPRE 222

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 47.3 bits (113), Expect = 6e-08
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 38  IDYIHSRN--FIHRDIKPDNFLMGLGKRGNLVY--IIDFGLAKNVPSS 81
           I+Y+ ++N   +HRD++  N  +        V   + DFGL++    S
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS 182

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 47.3 bits (113), Expect = 6e-08
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 8/52 (15%)

Query: 38  IDYIHSRNF-----IHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           +   H R+      +HRD+KP N  +        V + DFGLA+ +    S+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLD---GKQNVKLGDFGLARILNHDTSF 172

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 17/39 (43%), Positives = 28/39 (71%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           +D++HS   I+RD+KP+N L  L + G++  + DFGL+K
Sbjct: 139 LDHLHSLGIIYRDLKPENIL--LDEEGHIK-LTDFGLSK 174

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 47.6 bits (113), Expect = 7e-08
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 3/47 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           ++++H+R  ++RD+KP N L  L + G++  I D GLA +      +
Sbjct: 305 LEHMHNRFVVYRDLKPANIL--LDEHGHVR-ISDLGLACDFSKKKPH 348

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 47.2 bits (113), Expect = 8e-08
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 9/56 (16%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGN---LVYIIDFGLAKNVPSSPSYERHVTTQT 92
            +H  N IHRD+KP N L+      N    + + DFGLA+ +  S +     T Q 
Sbjct: 127 VLHGSNVIHRDLKPSNLLI------NSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + ++H +  I+RD+KP+N +  L  +G++  + DFGL K
Sbjct: 134 LGHLHQKGIIYRDLKPENIM--LNHQGHVK-LTDFGLCK 169

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 47.1 bits (112), Expect = 1e-07
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 38  IDYIHSRN--FIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           + ++H +    IHRD+K +N L  L  +G +  + DFG A  +   P Y
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLL--LSNQGTIK-LCDFGSATTISHYPDY 194

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 46.9 bits (112), Expect = 1e-07
 Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           ++++H    I+RDIK +N L  L   G++V + DFGL+K
Sbjct: 172 LEHLHKLGIIYRDIKLENIL--LDSNGHVV-LTDFGLSK 207

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 46.9 bits (112), Expect = 1e-07
 Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + Y+HS N ++RD+KP+N L  L  +G++V + DFGL K
Sbjct: 152 LGYLHSLNIVYRDLKPENIL--LDSQGHIV-LTDFGLCK 187

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 46.9 bits (112), Expect = 1e-07
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 12/61 (19%)

Query: 24  QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           QI  G         +DY+ SR ++HRD+   N L+      + V I DFGL K + +   
Sbjct: 134 QICKG---------MDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLTKAIETDKE 181

Query: 84  Y 84
           Y
Sbjct: 182 Y 182

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 46.6 bits (111), Expect = 1e-07
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 12/61 (19%)

Query: 24  QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           QI  G         ++Y+ SR  +HRD+   N L+        V I DFGLAK +P    
Sbjct: 135 QICKG---------MEYLGSRRCVHRDLAARNILVE---SEAHVKIADFGLAKLLPLDKD 182

Query: 84  Y 84
           Y
Sbjct: 183 Y 183

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 46.6 bits (111), Expect = 1e-07
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           ++Y+H    IHRDIK  N L  L   G+   + DFG+A
Sbjct: 138 LEYLHFMRKIHRDIKAGNIL--LNTEGH-AKLADFGVA 172

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 46.5 bits (111), Expect = 1e-07
 Identities = 15/63 (23%), Positives = 20/63 (31%), Gaps = 16/63 (25%)

Query: 39  DYIHSRNFIHRDIKPDNFLM----------------GLGKRGNLVYIIDFGLAKNVPSSP 82
            YIHS + +H DIKP N  +                       +  I D G    + S  
Sbjct: 129 RYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ 188

Query: 83  SYE 85
             E
Sbjct: 189 VEE 191

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 46.8 bits (111), Expect = 1e-07
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 3/37 (8%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           DYIH   ++HR +K  + L  +   G  VY+      
Sbjct: 142 DYIHHMGYVHRSVKASHIL--ISVDGK-VYLSGLRSN 175

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 46.7 bits (111), Expect = 1e-07
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           ++++H RN I+RD+KP+N L  L   GN V I D GLA 
Sbjct: 302 LEHLHQRNIIYRDLKPENVL--LDDDGN-VRISDLGLAV 337

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + ++HS+  ++RD+K DN L  L K G++  I DFG+ K
Sbjct: 131 LQFLHSKGIVYRDLKLDNIL--LDKDGHIK-IADFGMCK 166

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 46.5 bits (111), Expect = 1e-07
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVT 89
           YIHS N +HRD+KP N L+        + I DFGLA+       +   +T
Sbjct: 143 YIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 189

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 46.6 bits (111), Expect = 1e-07
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 9/58 (15%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGN---LVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           Y+HS   +HRD+KP N L+      N    V + DFGL+++  +      ++      
Sbjct: 124 YLHSGGLLHRDMKPSNILL------NAECHVKVADFGLSRSFVNIRRVTNNIPLSINE 175

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 46.6 bits (111), Expect = 2e-07
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 3/36 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           YIHS + IHRD+KP N  +        + I+DFGLA
Sbjct: 147 YIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA 179

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 46.3 bits (110), Expect = 2e-07
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 3/38 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           + Y+HS N IHRD+K  N L  L + G  V + DFG A
Sbjct: 167 LAYLHSHNMIHRDVKAGNIL--LSEPGL-VKLGDFGSA 201

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + ++ S+  I+RD+K DN +  L   G++  I DFG+ K
Sbjct: 134 LFFLQSKGIIYRDLKLDNVM--LDSEGHIK-IADFGMCK 169

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           ++Y+H R  I+RD+K DN L  L   G++  + D+G+ K
Sbjct: 123 LNYLHERGIIYRDLKLDNVL--LDSEGHIK-LTDYGMCK 158

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           YIHS   +HRD+KP N  +        + I+DFGLA+
Sbjct: 141 YIHSAGVVHRDLKPGNLAV---NEDCELKILDFGLAR 174

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + ++H +  I+RD+K DN L  L   G+   + DFG+ K
Sbjct: 137 LMFLHDKGIIYRDLKLDNVL--LDHEGHCK-LADFGMCK 172

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 46.1 bits (109), Expect = 2e-07
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 12/64 (18%)

Query: 24  QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           Q++ G E         ++ SR  IHRD+   N L+      N+V I DFGLA+++   P 
Sbjct: 201 QVAKGME---------FLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPD 248

Query: 84  YERH 87
           Y R 
Sbjct: 249 YVRK 252

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 45.9 bits (109), Expect = 2e-07
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 9/47 (19%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGN---LVYIIDFGLAKNVPSSPS 83
           +IH    IHRD+KP N L+      N    V + DFGLA+ + S   
Sbjct: 144 FIHESGIIHRDLKPANCLL------NQDCSVKVCDFGLARTINSEKD 184

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 45.8 bits (109), Expect = 2e-07
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           YIH+   IHRD+KP N  +        + I+DFGLA
Sbjct: 143 YIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLA 175

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 45.8 bits (109), Expect = 3e-07
 Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 3/38 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           ++Y+H    IHRD+K  N L  LG+ G+ V I DFG++
Sbjct: 134 LEYLHKNGQIHRDVKAGNIL--LGEDGS-VQIADFGVS 168

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 45.8 bits (109), Expect = 3e-07
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 5/41 (12%)

Query: 38  IDYIHSRN--FIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           ++Y+H+RN   +HR++K  N L+        V + DFGL++
Sbjct: 150 MNYLHNRNPPIVHRNLKSPNLLVDKKYT---VKVCDFGLSR 187

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 45.8 bits (109), Expect = 3e-07
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           ++Y+H R  I+RD+K DN L  L   G++  + D+G+ K
Sbjct: 166 LNYLHERGIIYRDLKLDNVL--LDSEGHIK-LTDYGMCK 201

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 45.4 bits (108), Expect = 3e-07
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           RE +  + ++H    IHRDIK  N L  L +    V ++DFG++
Sbjct: 136 REILRGLSHLHQHKVIHRDIKGQNVL--LTENAE-VKLVDFGVS 176

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 45.0 bits (107), Expect = 4e-07
 Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 3/44 (6%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           RE +  +DY+HS   IHRDIK  N L  L + G  V + DFG+A
Sbjct: 126 REILKGLDYLHSEKKIHRDIKAANVL--LSEHGE-VKLADFGVA 166

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 45.0 bits (107), Expect = 5e-07
 Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 3/38 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           ++++HS+  IHRD+K  N L  +   G+ + + DFG++
Sbjct: 130 LNFLHSKRIIHRDLKAGNVL--MTLEGD-IRLADFGVS 164

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 45.0 bits (106), Expect = 6e-07
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + ++ S+  I+RD+K DN +  L   G++  I DFG+ K
Sbjct: 455 LFFLQSKGIIYRDLKLDNVM--LDSEGHIK-IADFGMCK 490

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVY-IIDFGLAKNVPSSPSYERHVTTQ 91
           + Y+H+R  IHRD+K  N L+      N V  I DFG++K        + H++T 
Sbjct: 152 LHYLHTRAIIHRDVKSINILLD----ENFVPKITDFGISKKGTE--LDQTHLSTV 200

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 43.4 bits (103), Expect = 1e-06
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 4/48 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           Y+ S+  IHRD+   N L+      N++ I DFG+++       Y   
Sbjct: 228 YLESKCCIHRDLAARNCLVT---EKNVLKISDFGMSREEADG-VYAAS 271

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 12/64 (18%)

Query: 24  QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           QI+ G           Y+     +HR++   N L+      + V + DFG+A  +P    
Sbjct: 123 QIAKGMY---------YLEEHGMVHRNLAARNVLLK---SPSQVQVADFGVADLLPPDDK 170

Query: 84  YERH 87
              +
Sbjct: 171 QLLY 174

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 43.4 bits (103), Expect = 2e-06
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 40  YIH--SRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
            +H  S N  HRDIKP N L  + +    + + DFG AK
Sbjct: 144 CLHLPSVNVCHRDIKPHNVL--VNEADGTLKLCDFGSAK 180

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
            ++ S+N IHRD+   N L+     G++  I DFGLA+++ +  +Y   
Sbjct: 178 AFLASKNCIHRDVAARNVLLT---NGHVAKIGDFGLARDIMNDSNYIVK 223

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 43.2 bits (102), Expect = 2e-06
 Identities = 16/48 (33%), Positives = 26/48 (54%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           Y+   +FIHRDI   N L+     G +  I DFG+A+++  +  Y + 
Sbjct: 196 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG 243

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 16/48 (33%), Positives = 26/48 (54%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           Y+   +FIHRDI   N L+     G +  I DFG+A+++  +  Y + 
Sbjct: 155 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 202

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           Y+   NF+HRD+   N L+      +   I DFGL+K + +  +Y
Sbjct: 132 YLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENY 173

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 42.7 bits (101), Expect = 3e-06
 Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 13/67 (19%)

Query: 38  IDYIHSRNF--------IHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVT 89
           + ++H   F         HRD+K  N L+   K+     I D GLA     S +      
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILV---KKNGQCCIADLGLAVMHSQSTNQLD--V 172

Query: 90  TQTTRIG 96
               R+G
Sbjct: 173 GNNPRVG 179

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 42.8 bits (101), Expect = 3e-06
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 13/67 (19%)

Query: 38  IDYIHSRNF--------IHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVT 89
           + ++H+  F         HRD+K  N L+   K+     I D GLA    S  +      
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVKFISDTNEV--DI 201

Query: 90  TQTTRIG 96
              TR+G
Sbjct: 202 PPNTRVG 208

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 42.6 bits (101), Expect = 3e-06
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
            ++ S+N IHRD+   N L+     G +  I DFGLA+++ +  +Y   
Sbjct: 159 AFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIKNDSNYVVK 204

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 42.2 bits (100), Expect = 4e-06
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           Y+ S+ FIHRD+   N L+      +LV I DFGL + +P +  +
Sbjct: 136 YLESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMRALPQNDDH 177

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 42.3 bits (100), Expect = 5e-06
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)

Query: 39  DYIHSRN--FIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
            ++H+R    IHRD+K DN  +  G  G+ V I D GLA    +S
Sbjct: 143 QFLHTRTPPIIHRDLKCDNIFIT-GPTGS-VKIGDLGLATLKRAS 185

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 41.8 bits (99), Expect = 5e-06
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           Y+ S++F+HRD+   N L+G      LV I DFG++++V S+  Y   
Sbjct: 148 YLASQHFVHRDLATRNCLVG---ANLLVKIGDFGMSRDVYSTDYYRVG 192

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 42.0 bits (99), Expect = 6e-06
 Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 4/40 (10%)

Query: 38  IDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           +DY+HS +N ++RD+K +N +  L K G++  I DFGL K
Sbjct: 261 LDYLHSEKNVVYRDLKLENLM--LDKDGHIK-ITDFGLCK 297

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 41.8 bits (99), Expect = 6e-06
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 12/61 (19%)

Query: 24  QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           QI+ G           Y+  R  +HRD+   N L+        V I DFGLAK + +   
Sbjct: 125 QIAKGMN---------YLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAKLLGAEEK 172

Query: 84  Y 84
            
Sbjct: 173 E 173

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 41.8 bits (99), Expect = 6e-06
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           ++H  + IHRDIK  N L  L +      I DFGLA+        +  +T+
Sbjct: 148 FLHENHHIHRDIKSANIL--LDEAFTAK-ISDFGLARASEKFA--QTVMTS 193

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Length = 540

 Score = 41.9 bits (99), Expect = 6e-06
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 6/67 (8%)

Query: 11  LVFPYSYGTKSGEQISTGKEDREWIGR-IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYI 69
           ++  Y  G  + + I    +    IG  +  +H  + IH D+   NF+         +YI
Sbjct: 416 IMMSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFD-----KDLYI 470

Query: 70  IDFGLAK 76
           IDFGL K
Sbjct: 471 IDFGLGK 477

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 41.9 bits (99), Expect = 7e-06
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           +++ SR  IHRD+   N L+      N+V I DFGLA+++   P Y R 
Sbjct: 162 EFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRK 207

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 41.5 bits (98), Expect = 8e-06
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           +++  ++ +HRD+   N L+     G +V I DFGLA+++ S  +Y   
Sbjct: 186 EFLEFKSCVHRDLAARNVLVT---HGKVVKICDFGLARDIMSDSNYVVR 231

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 41.3 bits (97), Expect = 9e-06
 Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 13/67 (19%)

Query: 38  IDYIHSR--------NFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVT 89
           + ++H             HRD+K  N L+   K+     I D GLA    S+        
Sbjct: 152 LAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTI--DI 206

Query: 90  TQTTRIG 96
               R+G
Sbjct: 207 APNHRVG 213

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 41.2 bits (97), Expect = 1e-05
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           +Y+ S+  IHRD+   N L+      N++ I DFGLA+++     Y++ 
Sbjct: 205 EYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKT 250

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 2/41 (4%), Positives = 11/41 (26%), Gaps = 5/41 (12%)

Query: 38  IDYIHSRNF--IHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
           + ++H+         +   + ++          I    +  
Sbjct: 124 MAFLHTLEPLIPRHALNSRSVMIDEDMT---ARISMADVKF 161

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           Y+  +NF+HRD+   N L+      +   I DFGL+K + +  SY
Sbjct: 125 YLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLSKALGADDSY 166

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 41.1 bits (96), Expect = 1e-05
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           Y+  +NF+HR++   N L+      +   I DFGL+K + +  SY
Sbjct: 451 YLEEKNFVHRNLAARNVLLV---NRHYAKISDFGLSKALGADDSY 492

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 40.8 bits (96), Expect = 1e-05
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 12/64 (18%)

Query: 24  QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           QI+ G           Y+  R  +HRD+   N L+        V I DFGLAK + +   
Sbjct: 125 QIAKGMN---------YLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAKLLGAEEK 172

Query: 84  YERH 87
               
Sbjct: 173 EYHA 176

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 12/64 (18%)

Query: 24  QISTGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           +I+ G           Y+++  F+HRD+   N ++        V I DFG+ +++  +  
Sbjct: 146 EIADGMA---------YLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETDY 193

Query: 84  YERH 87
           Y + 
Sbjct: 194 YRKG 197

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 4/48 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           Y+     IHRD+   N L+G      ++ + DFG+ + V     Y   
Sbjct: 119 YLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDD-QYTSS 162

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 40.9 bits (96), Expect = 1e-05
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           Y+   N++HRD++  N L+G      +  + DFGLA+ +  +    R 
Sbjct: 295 YVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQ 339

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           +Y+ S+  IHRD+   N L+      N++ I DFGLA+++ +   Y++ 
Sbjct: 171 EYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKT 216

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 40.6 bits (95), Expect = 2e-05
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           Y+   N++HRD++  N L+G      +  + DFGLA+ +  +    R 
Sbjct: 378 YVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQ 422

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 32  REWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
              +  + Y+      IHRD+KP N L  L +RG  + + DFG++  +    + +R    
Sbjct: 131 VAIVKALYYLKEKHGVIHRDVKPSNIL--LDERGQ-IKLCDFGISGRLVDDKAKDRSAGC 187

Query: 91  QT 92
             
Sbjct: 188 AA 189

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 40.3 bits (95), Expect = 2e-05
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           Y+     +HRD+   N L+     G  + I DFGL+++V    SY + 
Sbjct: 165 YLAEMKLVHRDLAARNILVA---EGRKMKISDFGLSRDVYEEDSYVKR 209

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 40.5 bits (95), Expect = 2e-05
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA 75
           +D +H    IH D+KP+N L+    R + + +IDFG +
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGR-SGIKVIDFGSS 249

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           +Y+ S+  IHRD+   N L+      N++ I DFGLA+++ +   Y++ 
Sbjct: 217 EYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKT 262

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           Y+   +F+HRD+   N L+G   +G +V I DFG+++++ S+  Y   
Sbjct: 173 YLAGLHFVHRDLATRNCLVG---QGLVVKIGDFGMSRDIYSTDYYRVG 217

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 40.0 bits (94), Expect = 2e-05
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 12/58 (20%)

Query: 33  EWIGRI--------DYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           E +G+I        +++      IHRDIKP N L  L + GN + + DFG++  +  S
Sbjct: 125 EILGKITLATVKALNHLKENLKIIHRDIKPSNIL--LDRSGN-IKLCDFGISGQLVDS 179

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 40.1 bits (94), Expect = 3e-05
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 3/39 (7%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           Y+  +NFIHR++   N L+G     +LV + DFGL++ +
Sbjct: 333 YLEKKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLM 368

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 12/69 (17%)

Query: 33  EWIGRI--------DYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           + +G+I        +++HS  + IHRD+KP N L  +   G  V + DFG++  +    +
Sbjct: 109 DILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVL--INALGQ-VKMCDFGISGYLVDDVA 165

Query: 84  YERHVTTQT 92
            +     + 
Sbjct: 166 KDIDAGCKP 174

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 3/47 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           Y+    ++HRD+   N L+       +  + DFGL++ +   P    
Sbjct: 166 YLSDLGYVHRDLAARNVLVD---SNLVCKVSDFGLSRVLEDDPDAAY 209

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           Y+ +RNF+HRD+   N ++        V + DFGL+K + S   Y + 
Sbjct: 162 YLSNRNFLHRDLAARNCMLR---DDMTVCVADFGLSKKIYSGDYYRQG 206

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 6/44 (13%)

Query: 47  IHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           IHRD+K  N L  L +    V + DFGLAK +    +   HVTT
Sbjct: 156 IHRDVKAANIL--LDEEFEAV-VGDFGLAKLMDYKDT---HVTT 193

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 39.5 bits (93), Expect = 3e-05
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 4/48 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           ++ S  FIHRD+   N L+    R   V + DFG+ + V     Y   
Sbjct: 119 FLESHQFIHRDLAARNCLVD---RDLCVKVSDFGMTRYVLDD-QYVSS 162

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 39.6 bits (93), Expect = 3e-05
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           +Y+   NF+HRD+   N L+      N+  + DFGL K   S+    +
Sbjct: 303 EYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQDTGK 347

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           Y+   NF+HRD+   N L+      N+  + DFGL K  
Sbjct: 132 YLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEA 167

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 39.6 bits (93), Expect = 4e-05
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           Y+  R F+HRD+   N L+G      +V I DFGL++N+ S+  Y+  
Sbjct: 189 YLSERKFVHRDLATRNCLVG---ENMVVKIADFGLSRNIYSADYYKAD 233

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           Y+ S+ F+HRD+   N L+       +V + DFGL++ V     Y   
Sbjct: 135 YLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVLDD-EYTSS 178

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 39.2 bits (92), Expect = 4e-05
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           Y+ SRNFIHRD+   N ++        V + DFGL++ + S   Y + 
Sbjct: 152 YLSSRNFIHRDLAARNCMLA---EDMTVCVADFGLSRKIYSGDYYRQG 196

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 39.3 bits (92), Expect = 5e-05
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 5/56 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRI 95
           Y+    ++HRD+   N L+       +  + DFGL + +   P      TT+  +I
Sbjct: 162 YLSDMGYVHRDLAARNILIN---SNLVCKVSDFGLGRVLEDDPEAAY--TTRGGKI 212

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 39.2 bits (92), Expect = 5e-05
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQT 92
           Y+  + F+HRD+   N ++        V + DFGLA+++     Y        
Sbjct: 139 YLAEQKFVHRDLAARNCMLD---ESFTVKVADFGLARDILDREYYSVQQHRHA 188

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           +I  RN+IHRD++  N L+          I DFGLA+ +  +  Y   
Sbjct: 124 FIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIEDN-EYTAR 167

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 38.8 bits (91), Expect = 6e-05
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRI 95
           Y+ S+ F+HRD+   N ++        V + DFGLA+++     Y         ++
Sbjct: 143 YLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDK-EYYSVHNKTGAKL 194

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 3/48 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           Y+ S + +H+D+   N L+        V I D GL + V ++  Y+  
Sbjct: 143 YLSSHHVVHKDLATRNVLVY---DKLNVKISDLGLFREVYAADYYKLL 187

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 39.1 bits (91), Expect = 6e-05
 Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 12/65 (18%)

Query: 38  IDYIHS---------RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
           + Y+H+             HRD+   N L  +   G  V I DFGL+  +  +       
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVL--VKNDGTCV-ISDFGLSMRLTGNRLVRPGE 180

Query: 89  TTQTT 93
                
Sbjct: 181 EDNAA 185

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 39.1 bits (91), Expect = 7e-05
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)

Query: 38  IDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS 81
           + Y+      +HRD+KP N L  +  RG  + + DFG++  +  S
Sbjct: 144 LTYLREKHKIMHRDVKPSNIL--VNSRGE-IKLCDFGVSGQLIDS 185

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 38.8 bits (91), Expect = 8e-05
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           Y+  +NFIHRD+   N L+G     +LV + DFGL++ +
Sbjct: 126 YLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLM 161

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 38.4 bits (90), Expect = 9e-05
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           Y+ S+ F+HRDI   N L+      + V + DFGL++ +  S  Y+  
Sbjct: 131 YLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKAS 175

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 3/47 (6%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYER 86
           Y+ + N++HRD+   N L+       +  + DFGL++ +   P    
Sbjct: 162 YLANMNYVHRDLAARNILVN---SNLVCKVSDFGLSRVLEDDPEATY 205

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 4/48 (8%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           +I  RN+IHRD++  N L+       +  I DFGLA+ +  +  Y   
Sbjct: 299 FIEQRNYIHRDLRAANILVS---ASLVCKIADFGLARVIEDN-EYTAR 342

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 38.3 bits (89), Expect = 1e-04
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           Y+ S+ F+HRDI   N L+      + V + DFGL++ +
Sbjct: 506 YLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYM 541

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 37.8 bits (88), Expect = 1e-04
 Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 13/57 (22%)

Query: 38  IDYIHSRNF----------IHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           + Y+H               HRDIK  N L+   K      I DFGLA    +  S 
Sbjct: 134 LAYLHEDIPGLKDGHKPAISHRDIKSKNVLL---KNNLTACIADFGLALKFEAGKSA 187

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV 78
           Y+ S N +HRDI   N L+        V + DFGL++ +
Sbjct: 128 YLESINCVHRDIAVRNILVA---SPECVKLGDFGLSRYI 163

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 40  YIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRI 95
           ++ S+ F+HRD+   N ++        V + DFGLA+++     ++        ++
Sbjct: 207 FLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDK-EFDSVHNKTGAKL 258

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 7/50 (14%), Positives = 15/50 (30%), Gaps = 5/50 (10%)

Query: 40  YIHSRNFIHRDIKPDNFL-----MGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           ++     IH ++   N L              + + D G++  V      
Sbjct: 128 FLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 36.5 bits (85), Expect = 5e-04
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN 77
           DY+  + FIHRD+   N L+G      +  I DFGL++ 
Sbjct: 156 DYLSQKQFIHRDLAARNILVG---ENYVAKIADFGLSRG 191

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 36.2 bits (84), Expect = 6e-04
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)

Query: 38  IDYIHSR-NFIHRDIKPDNFLMGLGKR---GNLVYIIDFGLA 75
           +DY+H R   IH DIKP+N LM +         + I D G A
Sbjct: 144 LDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	99
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.91
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.91
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.91
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.9
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.9
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.9
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.89
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.89
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.89
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.88
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.88
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.88
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.88
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.86
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.86
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.86
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.86
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.85
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.85
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.85
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.8
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.79
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.79
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.79
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.79
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.79
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.78
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.78
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.78
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.78
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.78
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.78
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.77
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.77
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.77
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.77
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.77
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.76
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.76
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.76
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.76
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.75
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.75
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.75
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.75
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.75
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.75
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.75
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.75
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.74
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.74
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.74
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.74
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.74
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.74
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.74
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.73
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.73
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.73
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.73
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.73
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.73
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.73
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.73
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.73
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.73
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.72
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.72
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.72
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.72
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.72
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.72
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.72
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.72
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.72
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.71
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.71
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.71
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.71
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.71
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.71
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.71
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.71
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.71
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.71
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.71
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.71
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.71
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.7
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.7
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.7
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.7
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.7
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.7
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.7
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.7
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.7
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.7
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.69
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.69
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.69
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.69
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.69
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.69
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.69
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.69
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.68
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.68
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.68
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.68
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.68
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.68
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.67
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.67
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.67
3bhy_A	283	Death-associated protein kinase 3; death associate	99.67
3niz_A	311	Rhodanese family protein; structural genomics, str	99.67
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.67
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.67
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.67
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.67
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.67
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.67
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.67
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.67
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.67
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.67
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.66
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.66
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.66
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.66
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.66
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.66
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.66
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.66
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.66
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.66
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.66
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.66
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.66
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.66
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.66
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.66
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.66
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.66
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.66
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.66
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.65
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.65
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.65
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.65
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.65
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.65
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.65
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.65
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.65
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.65
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.65
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.64
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.64
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.64
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.64
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.64
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.64
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.64
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.64
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.64
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.64
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.64
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.64
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.64
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.64
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.64
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.64
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.64
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.63
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.63
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.63
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.63
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.63
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.63
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.63
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.63
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.63
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.63
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.63
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.63
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.63
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.63
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.63
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.63
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.62
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.62
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.62
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.62
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.62
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.62
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.62
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.62
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.62
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.62
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.62
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.62
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.62
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.62
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.62
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.62
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.61
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.61
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.61
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.61
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.61
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.61
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.61
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.61
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.61
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.61
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.61
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.6
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.6
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.6
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.6
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.6
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.6
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.6
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.59
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.59
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.59
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.59
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.59
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.59
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.59
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.59
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.58
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.58
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.58
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.58
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.58
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.57
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.57
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.57
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.57
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.55
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.55
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.55
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.54
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.54
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.53
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.53
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.52
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.51
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.48
3uqc_A	286	Probable conserved transmembrane protein; structur	99.4
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.38
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.11
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.28
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.26
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.88
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	96.91
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	96.78
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	96.16
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	95.27
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	94.58
3ats_A	357	Putative uncharacterized protein; hypothetical pro	93.65
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	92.8
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	91.06
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	80.09

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.91  E-value=5.9e-25  Score=138.83  Aligned_cols=90  Identities=23%  Similarity=0.365  Sum_probs=77.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+|+||||++||+|.+.++...         ++.|++.|+.|||+++|+|||+||+|+++.   ....+|++|||+|+
T Consensus       104 ~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~---~~g~vKl~DFGla~  180 (311)
T 4aw0_A          104 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAK  180 (311)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             CCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEc---CCCCEEEEEcCCce
Confidence            467899999999999999986532         889999999999999999999999999994   55679999999999


Q ss_pred             cCCCCC---Cccceeeccceecccc
Q psy14897         77 NVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                      .+....   .....+||..|.+||+
T Consensus       181 ~~~~~~~~~~~~~~~GTp~YmAPEv  205 (311)
T 4aw0_A          181 VLSPESKQARANSFVGTAQYVSPEL  205 (311)
T ss_dssp             ECCTTTTCCCBCCCCSCGGGCCHHH
T ss_pred             ecCCCCCcccccCcccCcccCCHHH
Confidence            875432   2345689999999986

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.91  E-value=1.2e-24  Score=139.06  Aligned_cols=90  Identities=21%  Similarity=0.328  Sum_probs=77.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ++.+|+||||+++|+|.+++...+        ++.|++.||.|||+++|+|||+|++|+++.   ....+|++|||+|+.
T Consensus       143 ~~~~~ivmEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFGla~~  219 (346)
T 4fih_A          143 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQ  219 (346)
T ss_dssp             TTEEEEEECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEE
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEC---CCCCEEEecCcCcee
Confidence            467999999999999999886533        789999999999999999999999999994   556799999999998


Q ss_pred             CCCC-CCccceeeccceecccc
Q psy14897         78 VPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      +... ......+||.+|.+||+
T Consensus       220 ~~~~~~~~~~~~GTp~YmAPEv  241 (346)
T 4fih_A          220 VSKEVPRRKSLVGTPYWMAPEL  241 (346)
T ss_dssp             CCSSSCCBCCCCSCGGGCCHHH
T ss_pred             cCCCCCcccccccCcCcCCHHH
Confidence            7544 34456799999999986

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.91  E-value=2.9e-24  Score=140.21  Aligned_cols=90  Identities=21%  Similarity=0.328  Sum_probs=77.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ++.+|+||||++||+|.++++..+        ++.|++.||.|||+++|+|||+|++|+++.   ....+|++|||+|+.
T Consensus       220 ~~~~~iVmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~---~~g~vKl~DFGla~~  296 (423)
T 4fie_A          220 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQ  296 (423)
T ss_dssp             TTEEEEEEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEEC---TTCCEEECCCTTCEE
T ss_pred             CCEEEEEEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc---CCCCEEEecCccceE
Confidence            467999999999999999886533        889999999999999999999999999994   556799999999998


Q ss_pred             CCCC-CCccceeeccceecccc
Q psy14897         78 VPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      +... ......+||..|.+||+
T Consensus       297 ~~~~~~~~~~~~GTp~YmAPEv  318 (423)
T 4fie_A          297 VSKEVPRRKSLVGTPYWMAPEL  318 (423)
T ss_dssp             CCSSCCCBCCCEECTTTCCHHH
T ss_pred             CCCCCccccccccCcCcCCHHH
Confidence            7554 34466799999999986

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.90  E-value=2.4e-24  Score=137.29  Aligned_cols=91  Identities=21%  Similarity=0.279  Sum_probs=73.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+|+||||++||+|.++++...         ++.|++.||.|+|+++|+|||+||+|+++.  ..+..+|++|||+|+
T Consensus       122 ~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~--~~g~~vKl~DFGla~  199 (336)
T 4g3f_A          122 GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS--SDGSRAALCDFGHAL  199 (336)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEC--TTSCCEEECCCTTCE
T ss_pred             CCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEe--CCCCEEEEeeCCCCe
Confidence            456899999999999999986532         789999999999999999999999999995  233469999999999


Q ss_pred             cCCCCCC------ccceeeccceecccc
Q psy14897         77 NVPSSPS------YERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~------~~~~~~t~~~~~~~~   98 (99)
                      .+.....      ....+||..|.+||+
T Consensus       200 ~~~~~~~~~~~~~~~~~~GT~~YmAPE~  227 (336)
T 4g3f_A          200 CLQPDGLGKSLLTGDYIPGTETHMAPEV  227 (336)
T ss_dssp             EC------------CCCCCCGGGCCHHH
T ss_pred             EccCCCcccceecCCccccCccccCHHH
Confidence            8754321      123579999999985

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.90  E-value=2.6e-24  Score=135.55  Aligned_cols=90  Identities=22%  Similarity=0.268  Sum_probs=75.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+|+||||++||+|.+.+....         ++.|++.|+.|+|+++++|||+||+|+++.   ....+|++|||+|+
T Consensus        98 ~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFGla~  174 (304)
T 3ubd_A           98 EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSK  174 (304)
T ss_dssp             TTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---TTSCEEEESSEEEE
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEc---CCCCEEecccccce
Confidence            467899999999999999986532         789999999999999999999999999994   55669999999998


Q ss_pred             cCCCC-CCccceeeccceecccc
Q psy14897         77 NVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      ..... ......+||..|.+||+
T Consensus       175 ~~~~~~~~~~~~~GT~~YmAPE~  197 (304)
T 3ubd_A          175 ESIDHEKKAYSFCGTVEYMAPEV  197 (304)
T ss_dssp             C-----CCCCSCCCCGGGCCHHH
T ss_pred             eccCCCccccccccCcccCCHHH
Confidence            76443 33456789999999985

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.90  E-value=1.3e-24  Score=139.11  Aligned_cols=90  Identities=22%  Similarity=0.275  Sum_probs=75.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++.+|+||||++||+|.+++..+           .++.|++.|+.|+|+++|+|||+||+|+++.   ....+|++|||+
T Consensus        95 ~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFGl  171 (350)
T 4b9d_A           95 NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTVQLGDFGI  171 (350)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEEC---TTCCEEECSTTE
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CCCCEEEccccc
Confidence            46789999999999999998532           2789999999999999999999999999994   556799999999


Q ss_pred             eecCCCCC-Cccceeeccceecccc
Q psy14897         75 AKNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      |+.+.... .....+||..|.+||+
T Consensus       172 a~~~~~~~~~~~~~~GT~~YmAPE~  196 (350)
T 4b9d_A          172 ARVLNSTVELARACIGTPYYLSPEI  196 (350)
T ss_dssp             ESCCCHHHHHHHHHHSCCTTCCHHH
T ss_pred             ceeecCCcccccccCCCccccCHHH
Confidence            99775432 2245689999999986

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.89  E-value=6.6e-24  Score=132.19  Aligned_cols=89  Identities=22%  Similarity=0.391  Sum_probs=65.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+|+||||+ +|+|.+.+..+         .++.|++.|+.|+|+++++|||+||+|+++.   ....+|++|||+|+
T Consensus        85 ~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~---~~~~vkl~DFGla~  160 (275)
T 3hyh_A           85 KDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSN  160 (275)
T ss_dssp             SSEEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC---TTCCEEECCSSCC-
T ss_pred             CCEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEEC---CCCCEEEeecCCCe
Confidence            46789999999 67999888643         2889999999999999999999999999994   55669999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...........+||..|.+||+
T Consensus       161 ~~~~~~~~~~~~GT~~Y~APE~  182 (275)
T 3hyh_A          161 IMTDGNFLKTSCGSPNYAAPEV  182 (275)
T ss_dssp             --------------CTTSCHHH
T ss_pred             ecCCCCccCCeeECcccCChhh
Confidence            8766665567899999999986

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.89  E-value=9e-24  Score=132.43  Aligned_cols=89  Identities=21%  Similarity=0.203  Sum_probs=74.6

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCC--eeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRN--FIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~--i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +.+++||||+++|+|.+++...         .++.|++.|+.|||+++  |+|||+||+|+++.  .....+|++|||+|
T Consensus       102 ~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~--~~~g~vKl~DFGla  179 (290)
T 3fpq_A          102 KCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLA  179 (290)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES--STTSCEEECCTTGG
T ss_pred             cEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE--CCCCCEEEEeCcCC
Confidence            4579999999999999998653         27899999999999998  99999999999994  23456999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.... ......+||..|.+||+
T Consensus       180 ~~~~~-~~~~~~~GTp~YmAPE~  201 (290)
T 3fpq_A          180 TLKRA-SFAKAVIGTPEFMAPEM  201 (290)
T ss_dssp             GGCCT-TSBEESCSSCCCCCGGG
T ss_pred             EeCCC-CccCCcccCccccCHHH
Confidence            76433 33456789999999996

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.89  E-value=2.6e-23  Score=131.19  Aligned_cols=90  Identities=24%  Similarity=0.352  Sum_probs=71.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++++++||||+++|+|.+++...          .++.|++.|+.|||+++++|||+|++|++++   ....+|++|||+|
T Consensus       103 ~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~---~~~~~Ki~DFGla  179 (307)
T 3omv_A          103 KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH---EGLTVKIGDFGLA  179 (307)
T ss_dssp             SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE---TTEEEEECCCSSC
T ss_pred             CCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEEC---CCCcEEEeeccCc
Confidence            46789999999999999998542          2789999999999999999999999999995   5567999999999


Q ss_pred             ecCCCCC---Cccceeeccceecccc
Q psy14897         76 KNVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                      +......   .....+||..|.+||+
T Consensus       180 ~~~~~~~~~~~~~~~~GT~~ymAPE~  205 (307)
T 3omv_A          180 TVKSRWSGSQQVEQPTGSVLWMAPEV  205 (307)
T ss_dssp             BC------------CCCCTTSCCHHH
T ss_pred             eecccCCcceeecccccCCCccCHHH
Confidence            8764322   2345589999999985

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.88  E-value=3.5e-23  Score=130.18  Aligned_cols=88  Identities=17%  Similarity=0.265  Sum_probs=67.1

Q ss_pred             CeEEEEEeeCCCCchhhhccc------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+|+||||+.+|+|.+++..+            .++.|++.|+.|||+++++|||+||+|+++.   ....+|++|||+|
T Consensus        89 ~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~---~~~~vKl~DFGla  165 (299)
T 4g31_A           89 YLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT---MDDVVKVGDFGLV  165 (299)
T ss_dssp             EEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECCCCCC
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEEC---CCCcEEEccCccc
Confidence            479999999999999988642            2778999999999999999999999999994   4566999999999


Q ss_pred             ecCCCCC-------------Cccceeeccceecccc
Q psy14897         76 KNVPSSP-------------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-------------~~~~~~~t~~~~~~~~   98 (99)
                      +.+....             .....+||..|.+||+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~  201 (299)
T 4g31_A          166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQ  201 (299)
T ss_dssp             --------------------------CCCTTSCHHH
T ss_pred             eecCCCccccccccccccccccCCcccCccccCHHH
Confidence            8764332             1234579999999985

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.88  E-value=5.4e-23  Score=140.15  Aligned_cols=89  Identities=22%  Similarity=0.275  Sum_probs=77.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+|+||||+.||+|.+.+....         ++.|++.||.|||+++|+|||+||+|+++.   ....+|++|||+|+
T Consensus       264 ~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld---~~G~vKL~DFGlA~  340 (689)
T 3v5w_A          264 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLAC  340 (689)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEe---CCCCEEecccceee
Confidence            467899999999999999986532         889999999999999999999999999994   55679999999999


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+.... ....|||..|.+||+
T Consensus       341 ~~~~~~-~~t~~GTp~YmAPEv  361 (689)
T 3v5w_A          341 DFSKKK-PHASVGTHGYMAPEV  361 (689)
T ss_dssp             ECSSCC-CCSCCSCGGGCCHHH
T ss_pred             ecCCCC-CCCccCCcCccCHHH
Confidence            876543 345799999999985

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.88  E-value=1.4e-22  Score=130.20  Aligned_cols=91  Identities=22%  Similarity=0.357  Sum_probs=73.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      ++.+++||||+++|+|.+.++.      +.++.|++.|+.|+|+++++|||+||+|+++.  .....+|++|||+|+...
T Consensus        92 ~~~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~--~~~~~~kl~DFGla~~~~  169 (361)
T 4f9c_A           92 NDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYN--RRLKKYALVDFGLAQGTH  169 (361)
T ss_dssp             TTEEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCCTTCEECT
T ss_pred             CCEEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEe--CCCCeEEECcCCCCcccC
Confidence            4678999999999999998854      33889999999999999999999999999995  334679999999998653


Q ss_pred             CCC-----------------------------Cccceeeccceecccc
Q psy14897         80 SSP-----------------------------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        80 ~~~-----------------------------~~~~~~~t~~~~~~~~   98 (99)
                      ...                             .....+||.+|.+||+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~  217 (361)
T 4f9c_A          170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEV  217 (361)
T ss_dssp             TCSCGGGGGC--------------------------CCCCGGGCCHHH
T ss_pred             CccccccccccccccccccccccccccccccccccccccCccccCHHH
Confidence            321                             1234579999999985

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.88  E-value=2.6e-23  Score=139.90  Aligned_cols=91  Identities=16%  Similarity=0.247  Sum_probs=76.3

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccch------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTGK------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~~------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      .++..||||||++|++|.+.++.+.      ++.|++.||.|+|++||+|||+||+||++.   ....+|++|||+|+.+
T Consensus       313 d~~~~yLVMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~---~dg~vKL~DFGlAr~~  389 (569)
T 4azs_A          313 NAQSGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVD---ARQHARLIDFGSIVTT  389 (569)
T ss_dssp             CSSEEEEEEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEEC---TTSCEEECCCTTEESC
T ss_pred             ECCEEEEEEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEEC---CCCCEEEeecccCeeC
Confidence            3467999999999999999987543      899999999999999999999999999994   5567999999999977


Q ss_pred             CCCC-Cccceeeccceecccc
Q psy14897         79 PSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      .... .....+||..|.+||+
T Consensus       390 ~~~~~~~~t~vGTp~YmAPE~  410 (569)
T 4azs_A          390 PQDCSWPTNLVQSFFVFVNEL  410 (569)
T ss_dssp             C---CCSHHHHHHHHHHHHHH
T ss_pred             CCCCccccCceechhhccHHH
Confidence            5432 3355688999999886

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.86  E-value=3e-22  Score=126.06  Aligned_cols=88  Identities=23%  Similarity=0.225  Sum_probs=71.4

Q ss_pred             CeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhC--------CeeecCcCCCcEEEeeCCCCCeEEEee
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSR--------NFIHRDIKPDNFLMGLGKRGNLVYIID   71 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~--------~i~h~~l~~~~~l~~~~~~~~~~~l~d   71 (99)
                      .+++||||+++|+|.++++.+        +++.|++.|+.|+|++        +++|||+|++|++++   ....+|++|
T Consensus        75 ~~~lV~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~---~~~~~Ki~D  151 (303)
T 3hmm_A           75 QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTCCIAD  151 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEEC---TTSCEEECC
T ss_pred             EEEEEecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEEC---CCCCEEEEe
Confidence            579999999999999999754        3789999999999987        899999999999994   556799999


Q ss_pred             ccceecCCCCCC-----ccceeeccceecccc
Q psy14897         72 FGLAKNVPSSPS-----YERHVTTQTTRIGRI   98 (99)
Q Consensus        72 ~g~a~~~~~~~~-----~~~~~~t~~~~~~~~   98 (99)
                      ||+|+.......     ....+||..|.+||+
T Consensus       152 FGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~  183 (303)
T 3hmm_A          152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV  183 (303)
T ss_dssp             CTTCEEEETTTTEESCC-----CCGGGCCHHH
T ss_pred             CCCCccccCCCCceeeecccccccccccCHHH
Confidence            999987644322     123579999999985

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.86  E-value=8.1e-22  Score=132.82  Aligned_cols=92  Identities=21%  Similarity=0.377  Sum_probs=79.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++.+++||||++||+|.+.+..+          .++.|++.||.|||+++++|||++++|+++... ....+|+.|||+|
T Consensus       226 ~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~-~~~~vKl~DFG~a  304 (573)
T 3uto_A          226 DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLT  304 (573)
T ss_dssp             SSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCSSC
T ss_pred             CCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC-CCCCEEEeeccce
Confidence            46789999999999999988532          278999999999999999999999999999421 2356999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.+.........+||..|.+||+
T Consensus       305 ~~~~~~~~~~~~~GT~~y~APEv  327 (573)
T 3uto_A          305 AHLDPKQSVKVTTGTAEFAAPEV  327 (573)
T ss_dssp             EECCTTSEEEEECSSGGGCCHHH
T ss_pred             eEccCCCceeeeEECccccCHHH
Confidence            99887776677899999999985

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.86  E-value=2.6e-22  Score=126.23  Aligned_cols=90  Identities=23%  Similarity=0.340  Sum_probs=74.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKR   63 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~   63 (99)
                      ++.+++||||+++|+|.++|..+                      .++.|++.|+.|||+++++|||++++|++++   .
T Consensus        87 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~---~  163 (299)
T 4asz_A           87 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG---E  163 (299)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---G
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEEC---C
Confidence            46799999999999999998532                      2789999999999999999999999999995   4


Q ss_pred             CCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         64 GNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        64 ~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      ...+|++|||+|+........   ...++|..|.+||+
T Consensus       164 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~  201 (299)
T 4asz_A          164 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPES  201 (299)
T ss_dssp             GGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHH
T ss_pred             CCcEEECCcccceecCCCCceeecCceecChhhcCHHH
Confidence            566999999999876443322   23467888899885

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.86  E-value=6.8e-22  Score=125.76  Aligned_cols=90  Identities=22%  Similarity=0.342  Sum_probs=67.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG   61 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~   61 (99)
                      ++.+++||||+++|+|.+++...                        .++.|++.|+.|||+++++|||+|++|++++  
T Consensus       115 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~--  192 (329)
T 4aoj_A          115 GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG--  192 (329)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE--
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEEC--
Confidence            46789999999999999987532                        2789999999999999999999999999995  


Q ss_pred             CCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         62 KRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        62 ~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                       ....+|++|||+++.+......   ...++|..|.+||+
T Consensus       193 -~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~  231 (329)
T 4aoj_A          193 -QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPES  231 (329)
T ss_dssp             -TTTEEEECCCC----------------CCCCGGGCCHHH
T ss_pred             -CCCcEEEcccccceeccCCCcceecCcccccccccChhh
Confidence             5677999999999876443322   34568888999985

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.85  E-value=9.9e-22  Score=127.65  Aligned_cols=89  Identities=25%  Similarity=0.330  Sum_probs=73.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+|+||||++ |+|.+.+..+.         ++.|++.||.|||+++++|||+||+|+++.   ....+|++|||+|+
T Consensus       131 ~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~---~~~~~Ki~DFGla~  206 (398)
T 4b99_A          131 FKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN---ENCELKIGDFGMAR  206 (398)
T ss_dssp             CCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTCCEEECCCTTCB
T ss_pred             CCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccC---CCCCEEEeecceee
Confidence            367899999996 68988886532         889999999999999999999999999994   55679999999998


Q ss_pred             cCCCC-----CCccceeeccceecccc
Q psy14897         77 NVPSS-----PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~-----~~~~~~~~t~~~~~~~~   98 (99)
                      .+...     ......+||.+|.+||+
T Consensus       207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv  233 (398)
T 4b99_A          207 GLCTSPAEHQYFMTEYVATRWYRAPEL  233 (398)
T ss_dssp             CC-------CCCCCSSCCCCTTCCHHH
T ss_pred             ecccCccccccccccceeChHhcCHHH
Confidence            76432     22345689999999995

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.85  E-value=6.8e-22  Score=126.76  Aligned_cols=89  Identities=20%  Similarity=0.298  Sum_probs=74.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG   61 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~   61 (99)
                      +.+++||||+++|+|.++|+..                         .++.|++.|+.|||+++++|||++++|+++.  
T Consensus       142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~--  219 (353)
T 4ase_A          142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS--  219 (353)
T ss_dssp             SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC--
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeC--
Confidence            4689999999999999998531                         2678999999999999999999999999995  


Q ss_pred             CCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         62 KRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        62 ~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                       ....+|++|||+|+.+.....+   ...++|..|.+||+
T Consensus       220 -~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~  258 (353)
T 4ase_A          220 -EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET  258 (353)
T ss_dssp             -GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHH
T ss_pred             -CCCCEEECcchhhhhcccCCCceeeccccccccccCHHH
Confidence             4556999999999987554432   34567888999985

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.85  E-value=6.5e-22  Score=124.89  Aligned_cols=90  Identities=17%  Similarity=0.203  Sum_probs=74.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      ++.+++||||+++|+|.++|..+                         .++.|++.|+.|||+++++|||+++.|++++ 
T Consensus       101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~-  179 (308)
T 4gt4_A          101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY-  179 (308)
T ss_dssp             SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC-
Confidence            46789999999999999998431                         2789999999999999999999999999995 


Q ss_pred             CCCCCeEEEeeccceecCCCCC---Cccceeeccceecccc
Q psy14897         61 GKRGNLVYIIDFGLAKNVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                        ....+|++|||+++.+....   .....++|..|.+||+
T Consensus       180 --~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~  218 (308)
T 4gt4_A          180 --DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEA  218 (308)
T ss_dssp             --GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHH
T ss_pred             --CCCCEEECCcccceeccCCCceeEecccccCCcccCHHH
Confidence              45669999999998764332   2234578888999985

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.80  E-value=1.7e-19  Score=117.12  Aligned_cols=90  Identities=21%  Similarity=0.288  Sum_probs=75.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|...+...         .++.|++.++.|||+++++|+|++++|+++.   ....++++|||+++
T Consensus       125 ~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~---~~g~ikL~DFGla~  201 (396)
T 4dc2_A          125 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGMCK  201 (396)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCB
T ss_pred             CCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEC---CCCCEEEeecceee
Confidence            45689999999999999888643         2789999999999999999999999999994   55679999999998


Q ss_pred             cC-CCCCCccceeeccceecccc
Q psy14897         77 NV-PSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~-~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .. .........+||..|.+||+
T Consensus       202 ~~~~~~~~~~~~~gt~~Y~aPE~  224 (396)
T 4dc2_A          202 EGLRPGDTTSTFCGTPNYIAPEI  224 (396)
T ss_dssp             CCCCTTCCBCCCCBCGGGCCHHH
T ss_pred             ecccCCCccccccCCcccCCchh
Confidence            73 33444566789999999985

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.79  E-value=2.5e-19  Score=117.51  Aligned_cols=90  Identities=28%  Similarity=0.316  Sum_probs=75.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++.+++||||+.+|+|.+++...          .++.|++.++.|||+++++|+|++++|+++.   ....++++|||++
T Consensus       146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~---~~g~vkL~DFGla  222 (437)
T 4aw2_A          146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD---MNGHIRLADFGSC  222 (437)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEc---CCCCEEEcchhhh
Confidence            45689999999999999998652          2789999999999999999999999999994   5567999999999


Q ss_pred             ecCCCCCCc--cceeeccceecccc
Q psy14897         76 KNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      +.+......  ...+||..|.+||+
T Consensus       223 ~~~~~~~~~~~~~~~GT~~Y~APE~  247 (437)
T 4aw2_A          223 LKLMEDGTVQSSVAVGTPDYISPEI  247 (437)
T ss_dssp             EECCTTSCEECCSCCSCGGGCCHHH
T ss_pred             hhcccCCCcccccccCCcCeeChHH
Confidence            877554332  33589999999985

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.79  E-value=1.5e-19  Score=117.18  Aligned_cols=93  Identities=25%  Similarity=0.304  Sum_probs=70.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ...+++||||+.+|+|.+++..+           .++.|++.++.|||+++++|+|+++.|+++........+++.|||+
T Consensus       131 ~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~  210 (400)
T 1nxk_A          131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF  210 (400)
T ss_dssp             EEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             CcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccc
Confidence            34589999999999999988642           2789999999999999999999999999995322256799999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ++...........++|..|.+||+
T Consensus       211 a~~~~~~~~~~~~~gt~~y~aPE~  234 (400)
T 1nxk_A          211 AKETTSHNSLTTPCYTPYYVAPEV  234 (400)
T ss_dssp             CEECC-----------CTTCCGGG
T ss_pred             ccccCCCCccccCCCCCCccCHhh
Confidence            998766555566788999999986

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.79  E-value=1.4e-19  Score=114.73  Aligned_cols=90  Identities=18%  Similarity=0.372  Sum_probs=77.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+..+         .++.|++.++.|+|+++++|+|++|+|+++.   ....+++.|||++.
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~  162 (328)
T 3fe3_A           86 EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD---ADMNIKIADFGFSN  162 (328)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECSTTCCG
T ss_pred             CCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEc---CCCCEEEeeccCce
Confidence            45789999999999999988542         3789999999999999999999999999994   55669999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...........++|.+|.+||+
T Consensus       163 ~~~~~~~~~~~~gt~~y~aPE~  184 (328)
T 3fe3_A          163 EFTVGGKLDAFCGAPPYAAPEL  184 (328)
T ss_dssp             GGSSSCGGGTTSSSGGGCCHHH
T ss_pred             ecCCCCccccccCCcceeCccc
Confidence            8776666667789999999985

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.79  E-value=1.9e-19  Score=115.23  Aligned_cols=90  Identities=21%  Similarity=0.272  Sum_probs=71.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|.+.+...         .++.|++.++.|||+++++|+|++++|+++.   ....++++|||+++
T Consensus        96 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~---~~g~ikL~DFG~a~  172 (353)
T 3txo_A           96 PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADFGMCK  172 (353)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCB
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEEC---CCCCEEEcccccee
Confidence            35689999999999999888643         2789999999999999999999999999994   55679999999998


Q ss_pred             cCCC-CCCccceeeccceecccc
Q psy14897         77 NVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      .... .......+||..|.+||+
T Consensus       173 ~~~~~~~~~~~~~gt~~y~aPE~  195 (353)
T 3txo_A          173 EGICNGVTTATFCGTPDYIAPEI  195 (353)
T ss_dssp             CSCC---------CCGGGCCHHH
T ss_pred             ecccCCccccccCCCcCeEChhh
Confidence            6433 333455689999999985

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.79  E-value=5.5e-19  Score=112.49  Aligned_cols=90  Identities=24%  Similarity=0.418  Sum_probs=75.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|.+.+...         .++.|++.++.|||+++++|+|++++|+++.   ....+++.|||+++
T Consensus        77 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~vkL~DFG~a~  153 (337)
T 1o6l_A           77 HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCK  153 (337)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCB
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEEC---CCCCEEEeeccchh
Confidence            35789999999999999888643         2789999999999999999999999999994   55679999999998


Q ss_pred             cCC-CCCCccceeeccceecccc
Q psy14897         77 NVP-SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~-~~~~~~~~~~t~~~~~~~~   98 (99)
                      ... ........+||..|.+||+
T Consensus       154 ~~~~~~~~~~~~~gt~~y~aPE~  176 (337)
T 1o6l_A          154 EGISDGATMKTFCGTPEYLAPEV  176 (337)
T ss_dssp             CSCCTTCCBCCCEECGGGCCGGG
T ss_pred             hcccCCCcccccccChhhCChhh
Confidence            743 3334456789999999986

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.78  E-value=4.5e-19  Score=121.30  Aligned_cols=90  Identities=21%  Similarity=0.231  Sum_probs=76.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|.+.+...         .++.|++.||.|||+++++|+|++++|+++.   ....++++|||+++
T Consensus       414 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~---~~g~ikL~DFGla~  490 (674)
T 3pfq_A          414 MDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD---SEGHIKIADFGMCK  490 (674)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEEC---SSSCEEECCCTTCE
T ss_pred             CCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEc---CCCcEEEeecceee
Confidence            35689999999999999988642         2789999999999999999999999999994   55679999999998


Q ss_pred             cCC-CCCCccceeeccceecccc
Q psy14897         77 NVP-SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~-~~~~~~~~~~t~~~~~~~~   98 (99)
                      ... ........+||..|.+||+
T Consensus       491 ~~~~~~~~~~~~~GT~~Y~APE~  513 (674)
T 3pfq_A          491 ENIWDGVTTKTFCGTPDYIAPEI  513 (674)
T ss_dssp             ECCCTTCCBCCCCSCSSSCCHHH
T ss_pred             ccccCCcccccccCCCcccCHhh
Confidence            743 3334456789999999985

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.78  E-value=4e-19  Score=114.95  Aligned_cols=90  Identities=23%  Similarity=0.347  Sum_probs=78.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+...         .++.|++.|+.|||+++++|+|+++.|+++.   ....++++|||++.
T Consensus        87 ~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~vkL~DFG~a~  163 (384)
T 4fr4_A           87 EEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD---EHGHVHITDFNIAA  163 (384)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEC---CCCCEEEeccceee
Confidence            35689999999999999988653         2789999999999999999999999999994   55679999999999


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+.........+||..|.+||+
T Consensus       164 ~~~~~~~~~~~~gt~~Y~aPE~  185 (384)
T 4fr4_A          164 MLPRETQITTMAGTKPYMAPEM  185 (384)
T ss_dssp             ECCTTCCBCCCCSCGGGCCGGG
T ss_pred             eccCCCceeccCCCccccCCee
Confidence            8876666677789999999986

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.78  E-value=2.1e-19  Score=114.89  Aligned_cols=93  Identities=22%  Similarity=0.230  Sum_probs=74.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc--------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEee--------CCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST--------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL--------GKR   63 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~--------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~--------~~~   63 (99)
                      .+..++||||+.+|+|.+++..              ..++.|++.|+.|+|+++++|+|++++|+++..        ...
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~  218 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDL  218 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------
T ss_pred             CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccc
Confidence            4678999999999999999853              127899999999999999999999999999952        011


Q ss_pred             CCeEEEeeccceecCC---CCCCccceeeccceecccc
Q psy14897         64 GNLVYIIDFGLAKNVP---SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        64 ~~~~~l~d~g~a~~~~---~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...++++|||+++.+.   ........+||..|.+||+
T Consensus       219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~  256 (365)
T 3e7e_A          219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEM  256 (365)
T ss_dssp             CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHH
T ss_pred             cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHH
Confidence            5679999999997543   2333345678999999985

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.78  E-value=5.1e-19  Score=114.00  Aligned_cols=90  Identities=22%  Similarity=0.357  Sum_probs=75.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|.+.+....         ++.|++.++.|||+++++|+|++++|+++.   ....+++.|||+++
T Consensus       111 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~ikL~DFG~a~  187 (373)
T 2r5t_A          111 ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHIVLTDFGLCK  187 (373)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCCBCG
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEC---CCCCEEEeeCcccc
Confidence            357899999999999998886432         789999999999999999999999999994   55679999999998


Q ss_pred             cCC-CCCCccceeeccceecccc
Q psy14897         77 NVP-SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~-~~~~~~~~~~t~~~~~~~~   98 (99)
                      ... ........+||..|.+||+
T Consensus       188 ~~~~~~~~~~~~~gt~~y~aPE~  210 (373)
T 2r5t_A          188 ENIEHNSTTSTFCGTPEYLAPEV  210 (373)
T ss_dssp             GGBCCCCCCCSBSCCCCCCCHHH
T ss_pred             ccccCCCccccccCCccccCHHH
Confidence            643 3334456789999999985

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.78  E-value=5.5e-19  Score=113.13  Aligned_cols=90  Identities=21%  Similarity=0.217  Sum_probs=75.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|.+.+...         .++.|++.++.|||+++++|+|++++|+++.   ....+++.|||+++
T Consensus        93 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~vkL~DFG~a~  169 (353)
T 2i0e_A           93 MDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD---SEGHIKIADFGMCK  169 (353)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCB
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEc---CCCcEEEEeCCccc
Confidence            35789999999999999988642         2789999999999999999999999999994   55679999999998


Q ss_pred             cCCC-CCCccceeeccceecccc
Q psy14897         77 NVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      .... .......+||..|.+||+
T Consensus       170 ~~~~~~~~~~~~~gt~~y~aPE~  192 (353)
T 2i0e_A          170 ENIWDGVTTKTFCGTPDYIAPEI  192 (353)
T ss_dssp             CCCCTTCCBCCCCSCGGGCCHHH
T ss_pred             ccccCCcccccccCCccccChhh
Confidence            7432 333455689999999985

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.78  E-value=3e-19  Score=116.34  Aligned_cols=90  Identities=27%  Similarity=0.362  Sum_probs=75.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ++.+++||||+.+|+|.+.+....        ++.|++.++.|||+++++|+|++++|+++.   ....++++|||+++.
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~---~~g~ikL~DFG~a~~  217 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCMK  217 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEE
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeEC---CCCCEEEeccceeEe
Confidence            456899999999999999886432        789999999999999999999999999994   556799999999987


Q ss_pred             CCCCCC--ccceeeccceecccc
Q psy14897         78 VPSSPS--YERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~--~~~~~~t~~~~~~~~   98 (99)
                      +.....  ....+||..|.+||+
T Consensus       218 ~~~~~~~~~~~~~gt~~Y~APE~  240 (410)
T 3v8s_A          218 MNKEGMVRCDTAVGTPDYISPEV  240 (410)
T ss_dssp             CCTTSEEECCSCCSCGGGCCHHH
T ss_pred             eccCCcccccCCcCCccccCHHH
Confidence            755432  235689999999985

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.77  E-value=6.2e-19  Score=114.91  Aligned_cols=90  Identities=28%  Similarity=0.310  Sum_probs=75.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+.+++||||+.+|+|.+++...          .++.|++.++.|+|+++++|+|++++|+++.   ....++++|||++
T Consensus       133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld---~~g~vkL~DFGla  209 (412)
T 2vd5_A          133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLD---RCGHIRLADFGSC  209 (412)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeec---CCCCEEEeechhh
Confidence            35689999999999999998642          2789999999999999999999999999994   5567999999999


Q ss_pred             ecCCCCCCc--cceeeccceecccc
Q psy14897         76 KNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      +.+......  ...+||..|.+||+
T Consensus       210 ~~~~~~~~~~~~~~~Gt~~Y~APE~  234 (412)
T 2vd5_A          210 LKLRADGTVRSLVAVGTPDYLSPEI  234 (412)
T ss_dssp             EECCTTSCEECSSCCSCGGGCCHHH
T ss_pred             eeccCCCccccceeccccCcCCHHH
Confidence            887554332  34588999999985

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.77  E-value=7.3e-19  Score=112.25  Aligned_cols=90  Identities=23%  Similarity=0.305  Sum_probs=75.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|.+.+...         .++.|++.++.|||+++++|+|++++|+++.   ....+++.|||+++
T Consensus        90 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~vkL~DFG~a~  166 (345)
T 1xjd_A           90 KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---KDGHIKIADFGMCK  166 (345)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCB
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEEC---CCCCEEEeEChhhh
Confidence            35689999999999999988642         2789999999999999999999999999994   55679999999998


Q ss_pred             cCCC-CCCccceeeccceecccc
Q psy14897         77 NVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      .... .......+||..|.+||+
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~  189 (345)
T 1xjd_A          167 ENMLGDAKTNTFCGTPDYIAPEI  189 (345)
T ss_dssp             CCCCTTCCBCCCCSCGGGCCHHH
T ss_pred             hcccCCCcccCCCCCcccCChhh
Confidence            7533 233455688999999985

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.77  E-value=1.3e-18  Score=111.74  Aligned_cols=93  Identities=19%  Similarity=0.322  Sum_probs=77.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCC-CCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKR-GNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~-~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+|+|.+++...         .++.|++.++.|||+++++|+|++|+|+++..... ...+++.|||++
T Consensus        87 ~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a  166 (361)
T 2yab_A           87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (361)
T ss_dssp             SSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence            35689999999999999988643         27899999999999999999999999999842111 126999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ..+.........+||..|.+||+
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~  189 (361)
T 2yab_A          167 HEIEDGVEFKNIFGTPEFVAPEI  189 (361)
T ss_dssp             EECCTTCCCCCCCSCGGGCCHHH
T ss_pred             eEcCCCCccccCCCCccEECchH
Confidence            98876655566789999999985

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.77  E-value=8.3e-19  Score=111.88  Aligned_cols=90  Identities=21%  Similarity=0.283  Sum_probs=75.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|.+.+...         .++.|++.++.|||+++++|+|++++|+++.   ....+++.|||+++
T Consensus        82 ~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~~kL~DFG~a~  158 (345)
T 3a8x_A           82 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGMCK  158 (345)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCGGGCB
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEC---CCCCEEEEeccccc
Confidence            35789999999999999888642         2789999999999999999999999999994   55679999999998


Q ss_pred             cCC-CCCCccceeeccceecccc
Q psy14897         77 NVP-SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~-~~~~~~~~~~t~~~~~~~~   98 (99)
                      ... ........++|..|.+||+
T Consensus       159 ~~~~~~~~~~~~~gt~~y~aPE~  181 (345)
T 3a8x_A          159 EGLRPGDTTSTFCGTPNYIAPEI  181 (345)
T ss_dssp             CSCCTTCCBCCCCSCGGGCCHHH
T ss_pred             cccCCCCcccccCCCccccCccc
Confidence            643 3333455689999999985

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.77  E-value=1.1e-18  Score=111.92  Aligned_cols=93  Identities=28%  Similarity=0.413  Sum_probs=77.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+..+         .++.|++.++.|||+++++|+|++|+|+++........+++.|||++.
T Consensus       100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~  179 (362)
T 2bdw_A          100 ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI  179 (362)
T ss_dssp             SSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred             CCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence            35689999999999998887643         278999999999999999999999999999633334569999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...........++|..|.+||+
T Consensus       180 ~~~~~~~~~~~~gt~~y~aPE~  201 (362)
T 2bdw_A          180 EVNDSEAWHGFAGTPGYLSPEV  201 (362)
T ss_dssp             CCTTCCSCCCSCSCTTTCCHHH
T ss_pred             EecCCcccccCCCCccccCHHH
Confidence            8776655556788999999985

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.76  E-value=1.2e-18  Score=117.51  Aligned_cols=90  Identities=24%  Similarity=0.330  Sum_probs=77.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+.+++||||+.+|+|.+.+...           .++.|++.++.|||+++++|+|++++|+++.   ....++++|||+
T Consensus       256 ~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld---~~g~vKL~DFGl  332 (576)
T 2acx_A          256 KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD---DHGHIRISDLGL  332 (576)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCCTT
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEe---CCCCeEEEeccc
Confidence            45789999999999999887542           2789999999999999999999999999994   556799999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +..+.........+||..|.+||+
T Consensus       333 a~~~~~~~~~~~~~GT~~Y~APEv  356 (576)
T 2acx_A          333 AVHVPEGQTIKGRVGTVGYMAPEV  356 (576)
T ss_dssp             CEECCTTCCEECCCSCGGGCCHHH
T ss_pred             ceecccCccccccCCCccccCHHH
Confidence            998876655566789999999985

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.76  E-value=9.5e-19  Score=113.98  Aligned_cols=93  Identities=23%  Similarity=0.332  Sum_probs=70.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+....         ++.|++.++.|||+++++|+|++++|+++........+++.|||+++
T Consensus       211 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~  290 (419)
T 3i6u_A          211 AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  290 (419)
T ss_dssp             SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred             cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccce
Confidence            456899999999999998876432         78999999999999999999999999999533334469999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+.........++|..|.+||+
T Consensus       291 ~~~~~~~~~~~~gt~~y~aPE~  312 (419)
T 3i6u_A          291 ILGETSLMRTLCGTPTYLAPEV  312 (419)
T ss_dssp             SCC-----------CTTCCTTT
T ss_pred             ecCCCccccccCCCCCccCcee
Confidence            8766555566789999999986

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.76  E-value=8.1e-19  Score=111.05  Aligned_cols=89  Identities=22%  Similarity=0.243  Sum_probs=72.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc--------chHHHHHHHHHHHHh-hCCeeecCcCCCcEEEeeCC--------------
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST--------GKEDREWIGRIDYIH-SRNFIHRDIKPDNFLMGLGK--------------   62 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~--------~~~~~~i~~~l~~lh-~~~i~h~~l~~~~~l~~~~~--------------   62 (99)
                      .+.+++||||+.+|++.+.+..        ..++.|++.|+.|+| +++++|+|+||+|+++..+.              
T Consensus       134 ~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~  213 (336)
T 2vuw_A          134 DDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSST  213 (336)
T ss_dssp             TTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEE
T ss_pred             cCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCcccc
Confidence            6789999999999977666533        227899999999999 99999999999999996332              


Q ss_pred             ---CCCeEEEeeccceecCCCCCCccceeeccceecccc
Q psy14897         63 ---RGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        63 ---~~~~~~l~d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                         ....++++|||+++.....    ..++|..|.+||+
T Consensus       214 ~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aPE~  248 (336)
T 2vuw_A          214 IPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDEDL  248 (336)
T ss_dssp             EECTTEEEEECCCTTCBEEETT----EEECCCCTTCSGG
T ss_pred             ccCCCceEEEeeccccEecCCC----cEEEeecccChhh
Confidence               1127999999999876533    3578999999986

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.76  E-value=2e-18  Score=110.31  Aligned_cols=88  Identities=24%  Similarity=0.368  Sum_probs=74.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|.+.+...         .++.|++.++.|||+++++|+|++++|+++.   ....+++.|||+++
T Consensus       113 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~~kL~DFg~a~  189 (350)
T 1rdq_E          113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAK  189 (350)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEEC---CCCCEEEcccccce
Confidence            45689999999999999988642         2789999999999999999999999999994   55679999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ......  ...+||..|.+||+
T Consensus       190 ~~~~~~--~~~~gt~~y~aPE~  209 (350)
T 1rdq_E          190 RVKGRT--WTLCGTPEALAPEI  209 (350)
T ss_dssp             ECSSCB--CCCEECGGGCCHHH
T ss_pred             eccCCc--ccccCCccccCHHH
Confidence            765432  45688999999985

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.75  E-value=2e-18  Score=109.08  Aligned_cols=88  Identities=26%  Similarity=0.414  Sum_probs=74.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.+|+|.+.+....         ++.|++.++.|||+++++|+|++++|+++.   ....+++.|||+++
T Consensus        78 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~~kL~Dfg~a~  154 (318)
T 1fot_A           78 AQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD---KNGHIKITDFGFAK  154 (318)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC---TTSCEEECCCSSCE
T ss_pred             CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEc---CCCCEEEeecCcce
Confidence            356899999999999999886432         789999999999999999999999999994   55679999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ......  ...++|..|.+||+
T Consensus       155 ~~~~~~--~~~~gt~~y~aPE~  174 (318)
T 1fot_A          155 YVPDVT--YTLCGTPDYIAPEV  174 (318)
T ss_dssp             ECSSCB--CCCCSCTTTCCHHH
T ss_pred             ecCCcc--ccccCCccccCHhH
Confidence            765432  34678999999985

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.75  E-value=2.2e-18  Score=114.06  Aligned_cols=90  Identities=21%  Similarity=0.356  Sum_probs=77.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+++..+         .++.|++.|+.|||+++++|+|++++|+++.   ....++++|||++.
T Consensus        88 ~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~---~~~~vkL~DFG~a~  164 (476)
T 2y94_A           88 PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLD---AHMNAKIADFGLSN  164 (476)
T ss_dssp             SSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEC---TTCCEEECCCSSCE
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEe---cCCCeEEEeccchh
Confidence            35689999999999999988643         2789999999999999999999999999994   55669999999999


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...........++|..|.+||+
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~  186 (476)
T 2y94_A          165 MMSDGEFLRTSCGSPNYAAPEV  186 (476)
T ss_dssp             ECCTTCCBCCCCSCSTTCCHHH
T ss_pred             hccccccccccCCCcCeEChhh
Confidence            8776655566789999999985

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.75  E-value=2.8e-18  Score=108.38  Aligned_cols=92  Identities=22%  Similarity=0.373  Sum_probs=77.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+|+|.+.+...          .++.|++.++.|||+++++|+|++|+|+++... ....+++.|||++
T Consensus        73 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~-~~~~~kl~Dfg~a  151 (321)
T 1tki_A           73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQA  151 (321)
T ss_dssp             TTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCTTC
T ss_pred             CCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC-CCCCEEEEECCCC
Confidence            35689999999999999988643          278999999999999999999999999999521 1467999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ..+.........++|..|.+||+
T Consensus       152 ~~~~~~~~~~~~~gt~~y~aPE~  174 (321)
T 1tki_A          152 RQLKPGDNFRLLFTAPEYYAPEV  174 (321)
T ss_dssp             EECCTTCEEEEEESCGGGSCHHH
T ss_pred             eECCCCCccccccCChhhcCcHH
Confidence            98876665566778889999885

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.75  E-value=3.5e-18  Score=112.25  Aligned_cols=93  Identities=23%  Similarity=0.318  Sum_probs=76.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+|+|.+.+..+         .++.|++.++.|+|+++++|+|++|+|+++........+++.|||++.
T Consensus        82 ~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~  161 (444)
T 3soa_A           82 EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI  161 (444)
T ss_dssp             SSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred             CCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence            45689999999999998887643         278999999999999999999999999999643345679999999998


Q ss_pred             cCCCCC-Cccceeeccceecccc
Q psy14897         77 NVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ...... .....+||..|.+||+
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~APE~  184 (444)
T 3soa_A          162 EVEGEQQAWFGFAGTPGYLSPEV  184 (444)
T ss_dssp             CCCTTCCBCCCSCSCGGGCCHHH
T ss_pred             EecCCCceeecccCCcccCCHHH
Confidence            765443 2345678999999985

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.75  E-value=3.8e-18  Score=108.82  Aligned_cols=93  Identities=24%  Similarity=0.299  Sum_probs=74.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      ++..++||||+.+|+|.+.+..+             .++.|++.++.|||+++++|+|++++|+++........+++.||
T Consensus        98 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Df  177 (351)
T 3c0i_A           98 DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF  177 (351)
T ss_dssp             TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCC
T ss_pred             CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecC
Confidence            35689999999999998766421             27799999999999999999999999999963333455999999


Q ss_pred             cceecCCCCCC-ccceeeccceecccc
Q psy14897         73 GLAKNVPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      |++..+..... ....++|..|.+||+
T Consensus       178 g~a~~~~~~~~~~~~~~gt~~y~aPE~  204 (351)
T 3c0i_A          178 GVAIQLGESGLVAGGRVGTPHFMAPEV  204 (351)
T ss_dssp             TTCEECCTTSCBCCCCCSCGGGCCHHH
T ss_pred             cceeEecCCCeeecCCcCCcCccCHHH
Confidence            99988765432 344578999999985

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.75  E-value=4.9e-18  Score=107.37  Aligned_cols=93  Identities=22%  Similarity=0.300  Sum_probs=76.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCC-CCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGK-RGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~-~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+|+|.+++...         .++.|++.++.|||+++++|+|+++.|+++..+. ....+++.|||++
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a  165 (326)
T 2y0a_A           86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  165 (326)
T ss_dssp             SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence            35689999999999999988643         2789999999999999999999999999995221 1226999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ..+.........++|..|.+||+
T Consensus       166 ~~~~~~~~~~~~~gt~~y~aPE~  188 (326)
T 2y0a_A          166 HKIDFGNEFKNIFGTPEFVAPEI  188 (326)
T ss_dssp             EECCTTSCCCCCCSCTTTCCHHH
T ss_pred             eECCCCCccccccCCcCcCCcee
Confidence            98765555556688999999985

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.75  E-value=3.2e-18  Score=113.30  Aligned_cols=93  Identities=23%  Similarity=0.388  Sum_probs=77.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ....++||||+.+|+|.+.+..+         .++.|++.++.|||+++++|+|++|.|+++........++++|||++.
T Consensus       108 ~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~  187 (494)
T 3lij_A          108 KRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA  187 (494)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence            35689999999999998877532         278999999999999999999999999999533334569999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+.........++|..|.+||+
T Consensus       188 ~~~~~~~~~~~~gt~~y~aPE~  209 (494)
T 3lij_A          188 VFENQKKMKERLGTAYYIAPEV  209 (494)
T ss_dssp             ECBTTBCBCCCCSCTTTCCHHH
T ss_pred             ECCCCccccccCCCcCeeCHHH
Confidence            8776655566789999999985

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.75  E-value=5.1e-18  Score=106.04  Aligned_cols=90  Identities=26%  Similarity=0.416  Sum_probs=75.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      .+..++||||+.+|+|.+++...        .++.|++.++.|+|+++++|+|++++|+++.   ....+++.|||++..
T Consensus        89 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~~~  165 (297)
T 3fxz_A           89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQ  165 (297)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEE
T ss_pred             CCEEEEEEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEC---CCCCEEEeeCCCcee
Confidence            45689999999999999988643        2789999999999999999999999999994   456699999999987


Q ss_pred             CCCCC-Cccceeeccceecccc
Q psy14897         78 VPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +.... .....++|..|.+||+
T Consensus       166 ~~~~~~~~~~~~gt~~y~aPE~  187 (297)
T 3fxz_A          166 ITPEQSKRSTMVGTPYWMAPEV  187 (297)
T ss_dssp             CCSTTCCBCCCCSCGGGCCHHH
T ss_pred             cCCcccccCCccCCcCccChhh
Confidence            65443 3344578889999885

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.74  E-value=6.4e-18  Score=109.32  Aligned_cols=92  Identities=24%  Similarity=0.353  Sum_probs=76.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ....++||||+.+|+|.+.+...          .++.|++.++.|||+++++|+|++++|+++.. .....+++.|||++
T Consensus       120 ~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~~~vkL~DFG~a  198 (387)
T 1kob_A          120 KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLA  198 (387)
T ss_dssp             SSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTCCCEEECCCTTC
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEec-CCCCceEEEecccc
Confidence            45689999999999999988643          27899999999999999999999999999841 12356999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ..+.........++|..|.+||+
T Consensus       199 ~~~~~~~~~~~~~gt~~y~aPE~  221 (387)
T 1kob_A          199 TKLNPDEIVKVTTATAEFAAPEI  221 (387)
T ss_dssp             EECCTTSCEEEECSSGGGCCHHH
T ss_pred             eecCCCcceeeeccCCCccCchh
Confidence            98876655556678999999985

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.74  E-value=2e-18  Score=113.08  Aligned_cols=90  Identities=24%  Similarity=0.418  Sum_probs=72.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+.+++||||+.+|+|.+.+...         .++.|++.++.|||+ ++++|+|++++|+++.   ....++++|||++
T Consensus       220 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~---~~~~~kl~DFG~a  296 (446)
T 4ejn_A          220 HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLC  296 (446)
T ss_dssp             TTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEEC---SSSCEEECCCCCC
T ss_pred             CCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEEC---CCCCEEEccCCCc
Confidence            35689999999999998887542         278999999999998 9999999999999994   4567999999999


Q ss_pred             ecCCC-CCCccceeeccceecccc
Q psy14897         76 KNVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      +.... .......+||..|.+||+
T Consensus       297 ~~~~~~~~~~~~~~gt~~y~aPE~  320 (446)
T 4ejn_A          297 KEGIKDGATMKTFCGTPEYLAPEV  320 (446)
T ss_dssp             CTTCC-----CCSSSCGGGCCHHH
T ss_pred             eeccCCCcccccccCCccccCHhh
Confidence            86433 333455688999999985

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.74  E-value=4.9e-18  Score=113.94  Aligned_cols=90  Identities=26%  Similarity=0.344  Sum_probs=75.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      .+.+++||||+.+|+|.+.+...             .++.|++.++.|||+++++|+|++|+|+++.   ....+++.||
T Consensus       257 ~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~---~~g~vkL~DF  333 (543)
T 3c4z_A          257 KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD---DDGNVRISDL  333 (543)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCC
T ss_pred             CCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEe---CCCCEEEeec
Confidence            45689999999999998887532             1689999999999999999999999999994   5567999999


Q ss_pred             cceecCCCCCC-ccceeeccceecccc
Q psy14897         73 GLAKNVPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      |+++.+..... ....+||..|.+||+
T Consensus       334 Gla~~~~~~~~~~~~~~GT~~Y~APE~  360 (543)
T 3c4z_A          334 GLAVELKAGQTKTKGYAGTPGFMAPEL  360 (543)
T ss_dssp             TTCEECCTTCCCBCCCCSCTTTSCHHH
T ss_pred             ceeeeccCCCcccccccCCccccChhh
Confidence            99988765443 234589999999985

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.74  E-value=6.2e-18  Score=108.80  Aligned_cols=92  Identities=23%  Similarity=0.293  Sum_probs=76.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+|+|.+.+...          .++.|++.++.|||+++++|+|+++.|+++.. .....+++.|||++
T Consensus       158 ~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~~~~~~kl~DFG~a  236 (373)
T 2x4f_A          158 KNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLA  236 (373)
T ss_dssp             SSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE-TTTTEEEECCCSSC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEec-CCCCcEEEEeCCCc
Confidence            35689999999999998877532          26789999999999999999999999999832 23457999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.+.........++|..|.+||+
T Consensus       237 ~~~~~~~~~~~~~gt~~y~aPE~  259 (373)
T 2x4f_A          237 RRYKPREKLKVNFGTPEFLAPEV  259 (373)
T ss_dssp             EECCTTCBCCCCCSSCTTCCHHH
T ss_pred             eecCCccccccccCCCcEeChhh
Confidence            98876665566678999999984

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.74  E-value=7.2e-18  Score=105.89  Aligned_cols=88  Identities=17%  Similarity=0.274  Sum_probs=72.0

Q ss_pred             CeEEEEEeeCCCCchhhhccc------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ..++||||+++|+|.+++..+            .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++
T Consensus       135 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a  211 (332)
T 3qd2_B          135 YLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT---MDDVVKVGDFGLV  211 (332)
T ss_dssp             EEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTC
T ss_pred             eEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEe---CCCCEEEeecCcc
Confidence            379999999999999988642            3789999999999999999999999999994   5567999999999


Q ss_pred             ecCCCCC-------------Cccceeeccceecccc
Q psy14897         76 KNVPSSP-------------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-------------~~~~~~~t~~~~~~~~   98 (99)
                      +.+....             .....++|..|.+||+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  247 (332)
T 3qd2_B          212 TAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQ  247 (332)
T ss_dssp             EECSCC--------------CCCSCC-CGGGSCHHH
T ss_pred             cccccchhhccccccccccccccccCCCcCccChHH
Confidence            8875542             2233468888998885

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.74  E-value=8.1e-18  Score=105.75  Aligned_cols=92  Identities=16%  Similarity=0.294  Sum_probs=76.4

Q ss_pred             CCeEEEEEeeCCCCchhhhccc------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC-CCCCeEEEeecc
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG-KRGNLVYIIDFG   73 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~-~~~~~~~l~d~g   73 (99)
                      ...++||||+.+|+|.+++...            .++.|++.++.|||+++++|+|+++.|+++... .....+++.|||
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg  161 (319)
T 4euu_A           82 RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (319)
T ss_dssp             CCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred             ceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence            3679999999999999988642            278999999999999999999999999987322 234468999999


Q ss_pred             ceecCCCCCCccceeeccceecccc
Q psy14897         74 LAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +++.+.........++|..|.+||+
T Consensus       162 ~a~~~~~~~~~~~~~gt~~y~aPE~  186 (319)
T 4euu_A          162 AARELEDDEQFVSLYGTEEYLHPDM  186 (319)
T ss_dssp             TCEECCTTCCBCCCCSCGGGCCHHH
T ss_pred             CceecCCCCceeecccCCCccCHHH
Confidence            9998877666666778999999984

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.73  E-value=5e-18  Score=112.18  Aligned_cols=93  Identities=24%  Similarity=0.358  Sum_probs=75.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ....++||||+.+|+|.+.+...         .++.|++.++.|||+++++|+|++|.|+++........+++.|||++.
T Consensus        93 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  172 (486)
T 3mwu_A           93 SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (486)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence            35689999999999998877532         278999999999999999999999999999533345569999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+.........++|..|.+||+
T Consensus       173 ~~~~~~~~~~~~gt~~y~aPE~  194 (486)
T 3mwu_A          173 CFQQNTKMKDRIGTAYYIAPEV  194 (486)
T ss_dssp             TBCCC----CCTTGGGGCCGGG
T ss_pred             ECCCCCccCCCcCCCCCCCHHH
Confidence            7766655566789999999986

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.73  E-value=7.7e-18  Score=106.48  Aligned_cols=93  Identities=25%  Similarity=0.351  Sum_probs=62.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +...++||||+.+|+|.+.+..+.         ++.|++.++.|||+++++|+|+++.|+++........+++.|||+++
T Consensus        78 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~  157 (325)
T 3kn6_A           78 QLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR  157 (325)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCE
T ss_pred             CCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccce
Confidence            356899999999999999886532         78999999999999999999999999999633333479999999998


Q ss_pred             cCCCCC-Cccceeeccceecccc
Q psy14897         77 NVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ...... .....++|..|.+||+
T Consensus       158 ~~~~~~~~~~~~~~t~~y~aPE~  180 (325)
T 3kn6_A          158 LKPPDNQPLKTPCFTLHYAAPEL  180 (325)
T ss_dssp             ECCC-------------------
T ss_pred             ecCCCCCcccccCCCcCccCHHH
Confidence            765433 2345577889999985

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.73  E-value=7.8e-18  Score=111.71  Aligned_cols=93  Identities=26%  Similarity=0.319  Sum_probs=77.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ....++||||+.+|+|.+.+..+         .++.|++.++.|||+++++|+|++|+|+++........++++|||++.
T Consensus       118 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  197 (504)
T 3q5i_A          118 KKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS  197 (504)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCE
T ss_pred             CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCE
Confidence            35689999999999998887542         278999999999999999999999999999533223369999999999


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+.........++|..|.+||+
T Consensus       198 ~~~~~~~~~~~~gt~~y~aPE~  219 (504)
T 3q5i_A          198 FFSKDYKLRDRLGTAYYIAPEV  219 (504)
T ss_dssp             ECCTTSCBCCCCSCTTTCCHHH
T ss_pred             EcCCCCccccccCCcCCCCHHH
Confidence            8876655566789999999985

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.73  E-value=4.1e-18  Score=108.47  Aligned_cols=89  Identities=25%  Similarity=0.394  Sum_probs=75.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+ +|+|.+.+..+         .++.|++.++.|||+++++|+|++++|+++.   ....+++.|||++.
T Consensus        81 ~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~kl~DFG~s~  156 (336)
T 3h4j_B           81 PTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD---DNLNVKIADFGLSN  156 (336)
T ss_dssp             SSEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEEC---TTCCEEECCSSCTB
T ss_pred             CCEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEc---CCCCEEEEEeccce
Confidence            35689999999 67888877432         3789999999999999999999999999994   55679999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...........++|..|.+||+
T Consensus       157 ~~~~~~~~~~~~gt~~y~aPE~  178 (336)
T 3h4j_B          157 IMTDGNFLKTSCGSPNYAAPEV  178 (336)
T ss_dssp             TTTTSBTTCCCTTSTTTSCGGG
T ss_pred             eccCCcccccccCCcCcCCHHH
Confidence            8766655566789999999986

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.73  E-value=1.1e-17  Score=104.73  Aligned_cols=90  Identities=22%  Similarity=0.292  Sum_probs=72.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+|+|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~  155 (310)
T 3s95_A           79 DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVR---ENKNVVVADFGLA  155 (310)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEC---TTSCEEECCCTTC
T ss_pred             CCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEEC---CCCCEEEeecccc
Confidence            45689999999999999988652          2789999999999999999999999999994   5566999999999


Q ss_pred             ecCCCCCCc---------------cceeeccceecccc
Q psy14897         76 KNVPSSPSY---------------ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~---------------~~~~~t~~~~~~~~   98 (99)
                      .........               ...+||..|.+||+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  193 (310)
T 3s95_A          156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM  193 (310)
T ss_dssp             EECC--------------------CCCCSCGGGCCHHH
T ss_pred             eecccccccccccccccccccccccccCCCcceeCHHH
Confidence            876433221               14567888988884

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.73  E-value=4.1e-18  Score=109.13  Aligned_cols=92  Identities=23%  Similarity=0.298  Sum_probs=65.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+...         .++.|++.++.|||+++++|+|+++.|+++..+ ....+++.|||+++
T Consensus        88 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~-~~~~~kl~Dfg~a~  166 (361)
T 3uc3_A           88 PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS-PAPRLKICDFGYSK  166 (361)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSS-SSCCEEECCCCCC-
T ss_pred             CCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC-CCceEEEeecCccc
Confidence            45689999999999999887542         278999999999999999999999999999411 12348999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...........++|..|.+||+
T Consensus       167 ~~~~~~~~~~~~gt~~y~aPE~  188 (361)
T 3uc3_A          167 SSVLHSQPKSTVGTPAYIAPEV  188 (361)
T ss_dssp             --------------CTTSCHHH
T ss_pred             cccccCCCCCCcCCCCcCChhh
Confidence            6554444455678999999985

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.73  E-value=1.2e-17  Score=103.06  Aligned_cols=93  Identities=26%  Similarity=0.371  Sum_probs=77.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+.+..+         .++.|++.++.|+|+++++|+|+++.|+++..+.....+++.|||.+.
T Consensus        78 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~  157 (277)
T 3f3z_A           78 NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA  157 (277)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             CCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence            35689999999999998877542         278999999999999999999999999998433355679999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+..........+|..|.+||+
T Consensus       158 ~~~~~~~~~~~~~t~~y~aPE~  179 (277)
T 3f3z_A          158 RFKPGKMMRTKVGTPYYVSPQV  179 (277)
T ss_dssp             ECCTTSCBCCCCSCTTTCCHHH
T ss_pred             eccCccchhccCCCCCccChHH
Confidence            8776665566678888999884

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.73  E-value=7.7e-18  Score=108.44  Aligned_cols=88  Identities=32%  Similarity=0.443  Sum_probs=69.9

Q ss_pred             CCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ..+++||||+. |+|.+.++.+        .++.|++.++.|||+.+++|+|++|+|+++.   ....++++|||+++.+
T Consensus        84 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~~~  159 (388)
T 3oz6_A           84 RDVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLN---AECHVKVADFGLSRSF  159 (388)
T ss_dssp             SCEEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEES
T ss_pred             CEEEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEc---CCCCEEecCCcccccc
Confidence            46899999998 4888877643        2778999999999999999999999999994   5567999999999876


Q ss_pred             CCC----------------------CCccceeeccceecccc
Q psy14897         79 PSS----------------------PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~----------------------~~~~~~~~t~~~~~~~~   98 (99)
                      ...                      ......++|.+|.+||+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  201 (388)
T 3oz6_A          160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEI  201 (388)
T ss_dssp             SSCCCCCCCGGGCCC---------------CCCGGGGCCHHH
T ss_pred             cccccccccccccccccccccccccccccCCcccCCcCCHHH
Confidence            431                      12234578999999985

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.73  E-value=6e-18  Score=107.90  Aligned_cols=93  Identities=25%  Similarity=0.352  Sum_probs=66.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+...         .++.|++.++.|+|+++++|+|+++.|+++........+++.|||+++
T Consensus       120 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~  199 (349)
T 2w4o_A          120 PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK  199 (349)
T ss_dssp             SSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred             CCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence            35689999999999999888643         278999999999999999999999999999532335679999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...........++|..|.+||+
T Consensus       200 ~~~~~~~~~~~~gt~~y~aPE~  221 (349)
T 2w4o_A          200 IVEHQVLMKTVCGTPGYCAPEI  221 (349)
T ss_dssp             -------------CGGGSCHHH
T ss_pred             ccCcccccccccCCCCccCHHH
Confidence            7655544455678889999985

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.73  E-value=1.2e-17  Score=107.07  Aligned_cols=90  Identities=21%  Similarity=0.344  Sum_probs=77.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+++...         .++.|++.++.|+|+.+++|+|++|.|+++.   ....+++.|||++.
T Consensus       172 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~---~~~~ikl~DfG~~~  248 (365)
T 2y7j_A          172 SSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD---DNMQIRLSDFGFSC  248 (365)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred             CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEEEecCccc
Confidence            35689999999999999988643         2789999999999999999999999999994   55679999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+.........++|..|.+||+
T Consensus       249 ~~~~~~~~~~~~gt~~y~aPE~  270 (365)
T 2y7j_A          249 HLEPGEKLRELCGTPGYLAPEI  270 (365)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHH
T ss_pred             ccCCCcccccCCCCCCccChhh
Confidence            8876655566788999999985

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.72  E-value=1.5e-17  Score=106.80  Aligned_cols=90  Identities=20%  Similarity=0.303  Sum_probs=72.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      .+.+++||||+.+|+|.+++...                         .++.|++.++.|||+++++|+|+++.|+++. 
T Consensus       159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~-  237 (370)
T 2psq_A          159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-  237 (370)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC-
T ss_pred             CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEEC-
Confidence            46789999999999999988642                         1678999999999999999999999999994 


Q ss_pred             CCCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         61 GKRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                        ....+++.|||+++.+......   ....+|..|.+||+
T Consensus       238 --~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~  276 (370)
T 2psq_A          238 --ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA  276 (370)
T ss_dssp             --TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHH
T ss_pred             --CCCCEEEccccCCcccCcccceecccCCCcccceECHhH
Confidence              5567999999999876543321   22344567888874

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.72  E-value=6.5e-18  Score=106.60  Aligned_cols=88  Identities=20%  Similarity=0.275  Sum_probs=71.7

Q ss_pred             CeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhC---------CeeecCcCCCcEEEeeCCCCCeEEEe
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSR---------NFIHRDIKPDNFLMGLGKRGNLVYII   70 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~---------~i~h~~l~~~~~l~~~~~~~~~~~l~   70 (99)
                      ..++||||+.+|+|.++++..        .++.|++.++.|||+.         +++|+|+++.|+++.   ....++++
T Consensus        86 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~---~~~~~kL~  162 (336)
T 3g2f_A           86 EYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK---NDGTCVIS  162 (336)
T ss_dssp             EEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEEC---TTSCEEEC
T ss_pred             eEEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEc---CCCcEEEe
Confidence            568999999999999998643        2789999999999999         999999999999994   55679999


Q ss_pred             eccceecCCCCC---------Cccceeeccceecccc
Q psy14897         71 DFGLAKNVPSSP---------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        71 d~g~a~~~~~~~---------~~~~~~~t~~~~~~~~   98 (99)
                      |||++..+....         .....++|..|.+||+
T Consensus       163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  199 (336)
T 3g2f_A          163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEV  199 (336)
T ss_dssp             CCTTCEECSSSSCC---------CCTTSCGGGCCHHH
T ss_pred             eccceeecccccccCccccccccccCCCccceeCchh
Confidence            999998764321         1123467888999885

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.72  E-value=1.2e-17  Score=105.57  Aligned_cols=93  Identities=19%  Similarity=0.311  Sum_probs=71.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.+|+|.+.+...           .++.|++.++.|||+++++|+|+++.|+++........+++.|||+
T Consensus       101 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~  180 (327)
T 3lm5_A          101 TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM  180 (327)
T ss_dssp             SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred             CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence            45689999999999999987532           2789999999999999999999999999995322246799999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ++.+.........++|..|.+||+
T Consensus       181 a~~~~~~~~~~~~~gt~~y~aPE~  204 (327)
T 3lm5_A          181 SRKIGHACELREIMGTPEYLAPEI  204 (327)
T ss_dssp             CEEC---------CCCGGGCCHHH
T ss_pred             ccccCCccccccccCCcCccCCee
Confidence            998766555556678899999885

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.72  E-value=1.2e-17  Score=104.80  Aligned_cols=89  Identities=18%  Similarity=0.209  Sum_probs=70.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+ +++|.+.+...          .++.|++.++.|||+++++|+|+++.|+++.   ....++++|||++
T Consensus       129 ~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kl~DFG~a  204 (311)
T 3p1a_A          129 GGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG---PRGRCKLGDFGLL  204 (311)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---GGGCEEECCCTTC
T ss_pred             CCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---CCCCEEEccceee
Confidence            35689999999 56888776532          2789999999999999999999999999994   4556999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .............+|..|.+||+
T Consensus       205 ~~~~~~~~~~~~~gt~~y~aPE~  227 (311)
T 3p1a_A          205 VELGTAGAGEVQEGDPRYMAPEL  227 (311)
T ss_dssp             EECC------CCCCCGGGCCGGG
T ss_pred             eecccCCCCcccCCCccccCHhH
Confidence            88766555556678999999985

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.72  E-value=4.2e-17  Score=102.70  Aligned_cols=91  Identities=26%  Similarity=0.372  Sum_probs=76.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      ....++||||+.+++|.+.+..      ..++.|++.++.|||+++++|+|+++.|+++.  .....+++.|||+++.+.
T Consensus       105 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~--~~~~~~kl~Dfg~a~~~~  182 (330)
T 3nsz_A          105 SRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH  182 (330)
T ss_dssp             TCCEEEEEECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTTEEEECCCTTCEECC
T ss_pred             CCceEEEEeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEc--CCCCEEEEEeCCCceEcC
Confidence            4568999999999999888754      23789999999999999999999999999995  344479999999999876


Q ss_pred             CCCCccceeeccceecccc
Q psy14897         80 SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        80 ~~~~~~~~~~t~~~~~~~~   98 (99)
                      .........++..|.+||+
T Consensus       183 ~~~~~~~~~~~~~y~aPE~  201 (330)
T 3nsz_A          183 PGQEYNVRVASRYFKGPEL  201 (330)
T ss_dssp             TTCCCCSCCSCGGGCCHHH
T ss_pred             CCCccccccccccccChhh
Confidence            6665566678888888874

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.72  E-value=9.6e-18  Score=106.07  Aligned_cols=90  Identities=22%  Similarity=0.262  Sum_probs=69.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+|+|.+.+...         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~Dfg~~~  169 (327)
T 3a62_A           93 GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN---HQGHVKLTDFGLCK  169 (327)
T ss_dssp             SSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC---TTSCEEECCCSCC-
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEEC---CCCcEEEEeCCccc
Confidence            46789999999999999888643         2789999999999999999999999999994   55679999999987


Q ss_pred             cCCCC-CCccceeeccceecccc
Q psy14897         77 NVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      ..... ......++|..|.+||+
T Consensus       170 ~~~~~~~~~~~~~gt~~y~aPE~  192 (327)
T 3a62_A          170 ESIHDGTVTHTFCGTIEYMAPEI  192 (327)
T ss_dssp             ---------CTTSSCCTTSCHHH
T ss_pred             ccccCCccccccCCCcCccCHhh
Confidence            65332 22244578888999885

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.72  E-value=2.6e-17  Score=102.52  Aligned_cols=90  Identities=27%  Similarity=0.357  Sum_probs=73.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      .+..++||||+.+|+|.+.+...        .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++..
T Consensus       110 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg~~~~  186 (298)
T 2zv2_A          110 EDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNE  186 (298)
T ss_dssp             SSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCCTTCEE
T ss_pred             CCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC---CCCCEEEecCCCccc
Confidence            45689999999999998876532        2789999999999999999999999999994   455699999999987


Q ss_pred             CCCCC-Cccceeeccceecccc
Q psy14897         78 VPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +.... ......+|..|.+||+
T Consensus       187 ~~~~~~~~~~~~gt~~y~aPE~  208 (298)
T 2zv2_A          187 FKGSDALLSNTVGTPAFMAPES  208 (298)
T ss_dssp             CSSSSCEECCCCSCGGGCCGGG
T ss_pred             cccccccccCCcCCccccChhh
Confidence            75443 2244578889999985

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.72  E-value=7.5e-18  Score=104.79  Aligned_cols=89  Identities=21%  Similarity=0.210  Sum_probs=72.9

Q ss_pred             CCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHh--------hCCeeecCcCCCcEEEeeCCCCCeEEEe
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIH--------SRNFIHRDIKPDNFLMGLGKRGNLVYII   70 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh--------~~~i~h~~l~~~~~l~~~~~~~~~~~l~   70 (99)
                      ...++||||+.+|+|.++++...        ++.|++.++.|+|        +.+++|+|++++|+++.   ....+++.
T Consensus        79 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~---~~~~~kl~  155 (301)
T 3q4u_A           79 TQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK---KNGQCCIA  155 (301)
T ss_dssp             EEEEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEEC---TTSCEEEC
T ss_pred             ceeEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEc---CCCCEEEe
Confidence            45789999999999999986533        7899999999999        99999999999999994   55679999


Q ss_pred             eccceecCCCCCCc-----cceeeccceecccc
Q psy14897         71 DFGLAKNVPSSPSY-----ERHVTTQTTRIGRI   98 (99)
Q Consensus        71 d~g~a~~~~~~~~~-----~~~~~t~~~~~~~~   98 (99)
                      |||+++........     ...++|..|.+||+
T Consensus       156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~  188 (301)
T 3q4u_A          156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV  188 (301)
T ss_dssp             CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHH
T ss_pred             eCCCeeecccccccccccccccccccceeChhh
Confidence            99999765443221     23478889999985

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.72  E-value=2e-17  Score=105.39  Aligned_cols=93  Identities=22%  Similarity=0.257  Sum_probs=74.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC-CCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG-KRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~-~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+|+|.+.+..+.         ++.|++.++.|||+++++|+|++++|+++... .....+++.|||++
T Consensus        88 ~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a  167 (342)
T 2qr7_A           88 GKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFA  167 (342)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence            356899999999999999886432         78999999999999999999999999997421 11235899999999


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ..+.... .....++|..|.+||+
T Consensus       168 ~~~~~~~~~~~~~~gt~~y~aPE~  191 (342)
T 2qr7_A          168 KQLRAENGLLMTPCYTANFVAPEV  191 (342)
T ss_dssp             EECBCTTCCBCCSSCCSSCCCHHH
T ss_pred             ccCcCCCCceeccCCCccccCHHH
Confidence            8765432 3345578889999985

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.71  E-value=6.5e-18  Score=111.45  Aligned_cols=93  Identities=25%  Similarity=0.367  Sum_probs=78.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+..+         .++.|++.++.|||+++++|+|++|+|+++........++++|||++.
T Consensus        98 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  177 (484)
T 3nyv_A           98 KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST  177 (484)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred             CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence            35689999999999998887543         278999999999999999999999999999533345679999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+.........++|..|.+||+
T Consensus       178 ~~~~~~~~~~~~gt~~y~aPE~  199 (484)
T 3nyv_A          178 HFEASKKMKDKIGTAYYIAPEV  199 (484)
T ss_dssp             HBCCCCSHHHHTTGGGTCCHHH
T ss_pred             EcccccccccCCCCccccCcee
Confidence            8876666666788999999985

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.71  E-value=1.2e-17  Score=104.09  Aligned_cols=90  Identities=26%  Similarity=0.355  Sum_probs=69.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+++|+|.+++...         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++.
T Consensus        83 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~~  159 (294)
T 4eqm_A           83 DDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID---SNKTLKIFDFGIAK  159 (294)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCSSST
T ss_pred             CCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEEeCCCcc
Confidence            35689999999999999988643         2789999999999999999999999999994   55669999999998


Q ss_pred             cCCCCC--Cccceeeccceecccc
Q psy14897         77 NVPSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      .+....  .....++|..|.+||+
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE~  183 (294)
T 4eqm_A          160 ALSETSLTQTNHVLGTVQYFSPEQ  183 (294)
T ss_dssp             TC-------------CCSSCCHHH
T ss_pred             ccccccccccCccccCccccCHhH
Confidence            764432  2233468888999884

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.71  E-value=1.2e-17  Score=103.69  Aligned_cols=93  Identities=24%  Similarity=0.342  Sum_probs=70.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      ....++||||+.+|+|.+.+...             .++.|++.++.|||+++++|+|+++.|+++........+++.||
T Consensus        92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Df  171 (285)
T 3is5_A           92 YHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDF  171 (285)
T ss_dssp             SSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCC
T ss_pred             CCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEee
Confidence            35689999999999998877431             27899999999999999999999999999953334456999999


Q ss_pred             cceecCCCCCCccceeeccceecccc
Q psy14897         73 GLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |++..+..........+|..|.+||+
T Consensus       172 g~a~~~~~~~~~~~~~~t~~y~aPE~  197 (285)
T 3is5_A          172 GLAELFKSDEHSTNAAGTALYMAPEV  197 (285)
T ss_dssp             CCCCC----------CTTGGGCCHHH
T ss_pred             ecceecCCcccCcCcccccCcCChHH
Confidence            99987765555556678888999884

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.71  E-value=2.8e-17  Score=103.43  Aligned_cols=93  Identities=19%  Similarity=0.322  Sum_probs=75.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCC-CCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKR-GNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~-~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+++|.+++...         .++.|++.++.|+|+++++|+|+++.|+++..+.. ...+++.|||.+
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~  166 (321)
T 2a2a_A           87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (321)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence            35689999999999999988643         27899999999999999999999999999952111 116999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ..+..........+|..|.+||+
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~  189 (321)
T 2a2a_A          167 HEIEDGVEFKNIFGTPEFVAPEI  189 (321)
T ss_dssp             EECCTTCCCCCCCSCGGGCCHHH
T ss_pred             eecCccccccccCCCCCccCccc
Confidence            98766655556678889999884

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.71  E-value=3.6e-17  Score=103.82  Aligned_cols=90  Identities=20%  Similarity=0.224  Sum_probs=76.5

Q ss_pred             CCCeEEEEEeeCCC-Cchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGT-KSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g-~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+| +|.+++...         .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++
T Consensus       101 ~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~a  177 (335)
T 3dls_A          101 QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSA  177 (335)
T ss_dssp             SSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             CCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEc---CCCcEEEeecccc
Confidence            35688999999877 898888653         2789999999999999999999999999994   4567999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ..+.........++|..|.+||+
T Consensus       178 ~~~~~~~~~~~~~gt~~y~aPE~  200 (335)
T 3dls_A          178 AYLERGKLFYTFCGTIEYCAPEV  200 (335)
T ss_dssp             EECCTTCCBCEECSCGGGCCHHH
T ss_pred             eECCCCCceeccCCCccccChhh
Confidence            98876666666788999999985

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.71  E-value=9.8e-18  Score=107.07  Aligned_cols=90  Identities=24%  Similarity=0.279  Sum_probs=73.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+++..+         .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||+++
T Consensus       131 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~DfG~a~  207 (355)
T 1vzo_A          131 ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSK  207 (355)
T ss_dssp             TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEESCSSEEE
T ss_pred             CceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCcEEEeeCCCCe
Confidence            35689999999999999988643         2778999999999999999999999999994   55679999999998


Q ss_pred             cCCCCCC--ccceeeccceecccc
Q psy14897         77 NVPSSPS--YERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~--~~~~~~t~~~~~~~~   98 (99)
                      .+.....  ....++|..|.+||+
T Consensus       208 ~~~~~~~~~~~~~~gt~~y~aPE~  231 (355)
T 1vzo_A          208 EFVADETERAYDFCGTIEYMAPDI  231 (355)
T ss_dssp             ECCGGGGGGGCGGGSCCTTCCHHH
T ss_pred             ecccCCCCcccCcccCcCccChhh
Confidence            7643322  233478888999885

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.71  E-value=1.5e-17  Score=105.10  Aligned_cols=90  Identities=23%  Similarity=0.352  Sum_probs=73.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+|+|.+.+...         .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++.
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~kl~Dfg~a~  153 (323)
T 3tki_A           77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLAT  153 (323)
T ss_dssp             SSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred             CCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEe---CCCCEEEEEeeccc
Confidence            35679999999999999988754         2789999999999999999999999999994   55669999999998


Q ss_pred             cCCCCC---Cccceeeccceecccc
Q psy14897         77 NVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                      .+....   .....++|..|.+||+
T Consensus       154 ~~~~~~~~~~~~~~~gt~~y~aPE~  178 (323)
T 3tki_A          154 VFRYNNRERLLNKMCGTLPYVAPEL  178 (323)
T ss_dssp             ECEETTEECCBCSCCSCGGGSCHHH
T ss_pred             eeccCCcccccCCCccCcCccCcHH
Confidence            653222   2234578888988885

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.71  E-value=1.5e-17  Score=104.86  Aligned_cols=88  Identities=22%  Similarity=0.289  Sum_probs=73.1

Q ss_pred             CeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhC----------CeeecCcCCCcEEEeeCCCCCeEEE
Q psy14897          8 QSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSR----------NFIHRDIKPDNFLMGLGKRGNLVYI   69 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~----------~i~h~~l~~~~~l~~~~~~~~~~~l   69 (99)
                      .+++||||+.+|+|.++++.+.        ++.|++.++.|||+.          +++|+|++++|+++.   ....+++
T Consensus        96 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~---~~~~~kL  172 (322)
T 3soc_A           96 DLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLK---NNLTACI  172 (322)
T ss_dssp             EEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEEC---TTCCEEE
T ss_pred             eEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEEC---CCCeEEE
Confidence            4799999999999999986533        789999999999999          999999999999994   5567999


Q ss_pred             eeccceecCCCCCC---ccceeeccceecccc
Q psy14897         70 IDFGLAKNVPSSPS---YERHVTTQTTRIGRI   98 (99)
Q Consensus        70 ~d~g~a~~~~~~~~---~~~~~~t~~~~~~~~   98 (99)
                      .|||+++.+.....   ....++|..|.+||+
T Consensus       173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~  204 (322)
T 3soc_A          173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV  204 (322)
T ss_dssp             CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHH
T ss_pred             ccCCcccccccccCccccccCccCccccCHhh
Confidence            99999987644322   233578889999985

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.71  E-value=2.6e-17  Score=101.68  Aligned_cols=93  Identities=28%  Similarity=0.413  Sum_probs=76.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+++|.+.+..+         .++.|++.++.|+|+++++|+|+++.|+++..+.....+++.|||.+.
T Consensus        77 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~  156 (284)
T 3kk8_A           77 ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI  156 (284)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence            35679999999999998876542         278999999999999999999999999999643344569999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ............+|..|.+||+
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~  178 (284)
T 3kk8_A          157 EVNDSEAWHGFAGTPGYLSPEV  178 (284)
T ss_dssp             ECCSSCBCCCSCSCGGGCCHHH
T ss_pred             EcccCccccCCCCCcCCcCchh
Confidence            8776655556678888999885

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.71  E-value=1.6e-17  Score=108.58  Aligned_cols=88  Identities=26%  Similarity=0.377  Sum_probs=69.9

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ..+++||||+. |+|.+.++..         .++.|++.|+.|||+.+++|+|+++.|+++.   ....++++|||+++.
T Consensus       103 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~---~~~~~kL~DFGla~~  178 (432)
T 3n9x_A          103 DELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN---QDCSVKVCDFGLART  178 (432)
T ss_dssp             CCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEE
T ss_pred             CeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEEC---CCCCEEEccCCCccc
Confidence            56899999987 4998888653         2789999999999999999999999999994   556799999999987


Q ss_pred             CCCCC-----------------------Cccceeeccceecccc
Q psy14897         78 VPSSP-----------------------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~-----------------------~~~~~~~t~~~~~~~~   98 (99)
                      .....                       .....++|.+|.+||+
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~  222 (432)
T 3n9x_A          179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPEL  222 (432)
T ss_dssp             C-------------------------------CCCCCTTCCHHH
T ss_pred             ccccccccccccccccccccccccchhccccCCCCCccccCHHH
Confidence            65432                       1245678999999984

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.71  E-value=1.7e-17  Score=102.37  Aligned_cols=89  Identities=22%  Similarity=0.271  Sum_probs=75.0

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ...++||||+.+|+|.+++...           .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        93 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~  169 (284)
T 2a19_B           93 KCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV---DTKQVKIGDFGLV  169 (284)
T ss_dssp             EEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCCTTC
T ss_pred             ceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEc---CCCCEEECcchhh
Confidence            4579999999999999988542           2789999999999999999999999999995   4556999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ..+..........++..|.+||+
T Consensus       170 ~~~~~~~~~~~~~~~~~y~aPE~  192 (284)
T 2a19_B          170 TSLKNDGKRTRSKGTLRYMSPEQ  192 (284)
T ss_dssp             EESSCCSCCCCCCSCCTTSCHHH
T ss_pred             eeccccccccccCCcccccChhh
Confidence            88766555555678888888874

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.71  E-value=9.4e-18  Score=105.58  Aligned_cols=93  Identities=22%  Similarity=0.313  Sum_probs=75.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ....++||||+.+|+|.+.+...         .++.|++.++.|+|+++++|+|+++.|+++..+.....+++.|||++.
T Consensus        86 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  165 (322)
T 2ycf_A           86 AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  165 (322)
T ss_dssp             SSSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred             CCceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence            34589999999999998887543         278999999999999999999999999999533334459999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ............+|..|.+||+
T Consensus       166 ~~~~~~~~~~~~gt~~y~aPE~  187 (322)
T 2ycf_A          166 ILGETSLMRTLCGTPTYLAPEV  187 (322)
T ss_dssp             ECCCCHHHHHHHSCCTTCCHHH
T ss_pred             ecccccccccccCCcCccCchh
Confidence            8765443344567888888885

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.71  E-value=1.5e-17  Score=109.63  Aligned_cols=88  Identities=26%  Similarity=0.318  Sum_probs=65.8

Q ss_pred             CCeEEEEEeeCCCCchhhhcc-------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST-------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~-------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      ..+++||||+.++ +.+.+..       ..++.|++.|+.|||+.+++|+|++++|+++.   ....+++.|||+++...
T Consensus       140 ~~~~lv~E~~~~~-l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~---~~~~~kl~DFG~a~~~~  215 (464)
T 3ttj_A          140 QDVYLVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLARTAG  215 (464)
T ss_dssp             CEEEEEEECCSEE-HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCCCC----
T ss_pred             CeEEEEEeCCCCC-HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEe---CCCCEEEEEEEeeeecC
Confidence            4579999999874 5554432       23789999999999999999999999999994   55679999999999876


Q ss_pred             CCCCccceeeccceecccc
Q psy14897         80 SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        80 ~~~~~~~~~~t~~~~~~~~   98 (99)
                      ........++|.+|.+||+
T Consensus       216 ~~~~~~~~~gt~~y~aPE~  234 (464)
T 3ttj_A          216 TSFMMTPYVVTRYYRAPEV  234 (464)
T ss_dssp             -CCCC----CCCTTCCHHH
T ss_pred             CCcccCCCcccccccCHHH
Confidence            6655566789999999985

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.70  E-value=5.5e-17  Score=102.31  Aligned_cols=90  Identities=18%  Similarity=0.216  Sum_probs=70.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+|+|.+.+...          .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++
T Consensus        86 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~---~~~~~kl~Dfg~a  162 (325)
T 3kex_A           86 GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLK---SPSQVQVADFGVA  162 (325)
T ss_dssp             BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEES---SSSCEEECSCSGG
T ss_pred             CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEEC---CCCeEEECCCCcc
Confidence            46789999999999999988653          2789999999999999999999999999994   4566999999999


Q ss_pred             ecCCCCCC---ccceeeccceecccc
Q psy14897         76 KNVPSSPS---YERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~---~~~~~~t~~~~~~~~   98 (99)
                      +.+.....   .....++..|.+||+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~aPE~  188 (325)
T 3kex_A          163 DLLPPDDKQLLYSEAKTPIKWMALES  188 (325)
T ss_dssp             GGSCCCTTCCC-----CCTTTSCHHH
T ss_pred             cccCcccccccccCCCCcccccChHH
Confidence            88754432   233455667888874

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.70  E-value=2e-17  Score=108.55  Aligned_cols=88  Identities=26%  Similarity=0.377  Sum_probs=68.7

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ..+++||||+. |+|.+.+...         .++.|++.||.|||+.+++|+|++++|+++.   ....++++|||+++.
T Consensus       130 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~---~~~~~kl~DFGla~~  205 (458)
T 3rp9_A          130 DELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN---QDCSVKVCDFGLART  205 (458)
T ss_dssp             CCEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTCCEEECCCTTCBC
T ss_pred             ceEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEEC---CCCCEeecccccchh
Confidence            56899999975 6888877643         2789999999999999999999999999994   556799999999987


Q ss_pred             CCCCC----------------------------Cccceeeccceecccc
Q psy14897         78 VPSSP----------------------------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~----------------------------~~~~~~~t~~~~~~~~   98 (99)
                      +....                            .....++|.+|.+||+
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~  254 (458)
T 3rp9_A          206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPEL  254 (458)
T ss_dssp             TTSCTTCCCCCC---------------------------CCCTTCCHHH
T ss_pred             ccCccccccccccCccccccccccccccccccccccCCcccccccChHH
Confidence            64221                            2234577999999984

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.70  E-value=1.6e-17  Score=107.43  Aligned_cols=92  Identities=16%  Similarity=0.294  Sum_probs=75.8

Q ss_pred             CCeEEEEEeeCCCCchhhhccc------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC-CCCCeEEEeecc
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG-KRGNLVYIIDFG   73 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~-~~~~~~~l~d~g   73 (99)
                      ...++||||+.+|+|.+++...            .++.|++.++.|||+++++|+|+++.|+++... .....++++|||
T Consensus        82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG  161 (396)
T 4eut_A           82 RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (396)
T ss_dssp             CCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred             CeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence            3679999999999999988642            278999999999999999999999999987322 234468999999


Q ss_pred             ceecCCCCCCccceeeccceecccc
Q psy14897         74 LAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .++.+.........++|..|.+||+
T Consensus       162 ~a~~~~~~~~~~~~~gt~~y~aPE~  186 (396)
T 4eut_A          162 AARELEDDEQFVSLYGTEEYLHPDM  186 (396)
T ss_dssp             GCEECCCGGGSSCSSSCCTTCCHHH
T ss_pred             CceEccCCCccccccCCccccCHHH
Confidence            9998766655556678999999985

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.70  E-value=4.8e-17  Score=102.63  Aligned_cols=90  Identities=20%  Similarity=0.318  Sum_probs=74.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      .+..++||||+.+|+|.+++....        ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++..
T Consensus       114 ~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~~~~  190 (321)
T 2c30_A          114 GEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT---LDGRVKLSDFGFCAQ  190 (321)
T ss_dssp             TTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEE
T ss_pred             CCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCcEEEeeeeeeee
Confidence            356899999999999999886532        789999999999999999999999999994   456699999999987


Q ss_pred             CCCCC-Cccceeeccceecccc
Q psy14897         78 VPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +.... ......+|..|.+||+
T Consensus       191 ~~~~~~~~~~~~gt~~y~aPE~  212 (321)
T 2c30_A          191 ISKDVPKRKSLVGTPYWMAPEV  212 (321)
T ss_dssp             CCSSSCCBCCCCSCGGGCCHHH
T ss_pred             cccCccccccccCCccccCHhh
Confidence            65432 3345578888999885

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.70  E-value=2.6e-17  Score=103.71  Aligned_cols=89  Identities=21%  Similarity=0.259  Sum_probs=71.9

Q ss_pred             CCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhC--------CeeecCcCCCcEEEeeCCCCCeEEEe
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSR--------NFIHRDIKPDNFLMGLGKRGNLVYII   70 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~--------~i~h~~l~~~~~l~~~~~~~~~~~l~   70 (99)
                      ...++||||+.+|+|.++++...        ++.|++.++.|+|++        +++|+|+++.|+++.   ....+++.
T Consensus       108 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~---~~~~~kl~  184 (337)
T 3mdy_A          108 TQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK---KNGTCCIA  184 (337)
T ss_dssp             CEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEEC---TTSCEEEC
T ss_pred             CceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEEC---CCCCEEEE
Confidence            56899999999999999986532        789999999999998        999999999999994   55679999


Q ss_pred             eccceecCCCCCCc-----cceeeccceecccc
Q psy14897         71 DFGLAKNVPSSPSY-----ERHVTTQTTRIGRI   98 (99)
Q Consensus        71 d~g~a~~~~~~~~~-----~~~~~t~~~~~~~~   98 (99)
                      |||++..+......     ...++|..|.+||+
T Consensus       185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~  217 (337)
T 3mdy_A          185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEV  217 (337)
T ss_dssp             CCTTCEECC---------CCSSCSCGGGCCHHH
T ss_pred             eCCCceeeccccccccCCCCCCccCcceeChhh
Confidence            99999876443322     23478889999985

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.70  E-value=2.3e-17  Score=103.38  Aligned_cols=93  Identities=20%  Similarity=0.280  Sum_probs=69.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+..+         .++.|++.++.|||+++++|+|+++.|+++..+.....+++.|||++.
T Consensus        83 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~  162 (316)
T 2ac3_A           83 EDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGS  162 (316)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred             CCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence            35689999999999999988643         278999999999999999999999999999533333348999999987


Q ss_pred             cCCCCC--------Cccceeeccceecccc
Q psy14897         77 NVPSSP--------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~--------~~~~~~~t~~~~~~~~   98 (99)
                      .+....        .....++|..|.+||+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  192 (316)
T 2ac3_A          163 GIKLNGDCSPISTPELLTPCGSAEYMAPEV  192 (316)
T ss_dssp             -------------------CCSGGGCCHHH
T ss_pred             ccccCCccccccccccccccCCcCccChHH
Confidence            653221        1223457888999885

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.70  E-value=6.5e-17  Score=100.49  Aligned_cols=90  Identities=23%  Similarity=0.295  Sum_probs=76.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+++..+         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+.
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~  172 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSC  172 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred             CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEc---CCCcEEEecccchh
Confidence            35689999999999999988643         2789999999999999999999999999994   55569999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+..........++..|.+||+
T Consensus       173 ~~~~~~~~~~~~~~~~y~aPE~  194 (298)
T 1phk_A          173 QLDPGEKLREVCGTPSYLAPEI  194 (298)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHH
T ss_pred             hcCCCcccccccCCccccCHHH
Confidence            8766555556678888888874

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.70  E-value=1.3e-17  Score=106.85  Aligned_cols=86  Identities=15%  Similarity=0.123  Sum_probs=70.0

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEe
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYII   70 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~   70 (99)
                      ...++||||+. |+|.+++...                .++.|++.++.|||+++++|+|++|+|+++.   ....++++
T Consensus       161 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~---~~~~~kL~  236 (371)
T 3q60_A          161 ANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM---PDGRLMLG  236 (371)
T ss_dssp             EEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEC---TTSCEEEC
T ss_pred             eeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEEC---CCCCEEEE
Confidence            34899999999 8999988642                2458999999999999999999999999994   45569999


Q ss_pred             eccceecCCCCCCccceeeccceecccc
Q psy14897         71 DFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        71 d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |||+++......  ....+|..|.+||+
T Consensus       237 DFG~a~~~~~~~--~~~~~t~~y~aPE~  262 (371)
T 3q60_A          237 DVSALWKVGTRG--PASSVPVTYAPREF  262 (371)
T ss_dssp             CGGGEEETTCEE--EGGGSCGGGCCHHH
T ss_pred             ecceeeecCCCc--cCccCCcCCcChhh
Confidence            999998764332  13456688888885

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.70  E-value=7.5e-18  Score=112.94  Aligned_cols=88  Identities=22%  Similarity=0.358  Sum_probs=74.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCCCCc
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY   84 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~~   84 (99)
                      .+..++||||+++++|.+++.. ..++.|++.++.|+|+++++|+|+||+|+++.   .  .+++.|||+++........
T Consensus       411 ~~~~~lVmE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~---~--~~kL~DFGla~~~~~~~~~  485 (540)
T 3en9_A          411 LDNKRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFD---K--DLYIIDFGLGKISNLDEDK  485 (540)
T ss_dssp             TTTTEEEEECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEECTTCCTTSEEES---S--SEEECCCTTCEECCCHHHH
T ss_pred             CCccEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCHHHEEEC---C--eEEEEECccCEECCCcccc
Confidence            4567999999999999999875 45899999999999999999999999999994   3  6999999999987653221


Q ss_pred             --------cceeeccceecccc
Q psy14897         85 --------ERHVTTQTTRIGRI   98 (99)
Q Consensus        85 --------~~~~~t~~~~~~~~   98 (99)
                              ...++|..|.+||+
T Consensus       486 ~~~~~~~~~~~~GT~~y~APEv  507 (540)
T 3en9_A          486 AVDLIVFKKAVLSTHHEKFDEI  507 (540)
T ss_dssp             HHHHHHHHHHHHHHCGGGHHHH
T ss_pred             ccchhhhhhhhcCCCCcCCHHH
Confidence                    24578899988885

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.69  E-value=1.4e-17  Score=106.81  Aligned_cols=93  Identities=19%  Similarity=0.240  Sum_probs=72.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEE
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYI   69 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l   69 (99)
                      .+..++||||+.+|+|.+++...                .++.|++.++.|||+++++|+|++++|+++..+.....+++
T Consensus       146 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL  225 (367)
T 3l9p_A          146 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKI  225 (367)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEE
Confidence            45679999999999999988642                27899999999999999999999999999953334456999


Q ss_pred             eeccceecCCCC---CCccceeeccceecccc
Q psy14897         70 IDFGLAKNVPSS---PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        70 ~d~g~a~~~~~~---~~~~~~~~t~~~~~~~~   98 (99)
                      .|||+++.+...   .......+|..|.+||+
T Consensus       226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~  257 (367)
T 3l9p_A          226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEA  257 (367)
T ss_dssp             CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHH
T ss_pred             CCCccccccccccccccCCCcCCcccEECHHH
Confidence            999999754221   12233456778888874

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.69  E-value=1.5e-16  Score=100.04  Aligned_cols=90  Identities=20%  Similarity=0.217  Sum_probs=73.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      .+..++||||+.+|+|.+.+...             .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.||
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Df  183 (321)
T 2qkw_B          107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLD---ENFVPKITDF  183 (321)
T ss_dssp             TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEEC---TTCCEEECCC
T ss_pred             CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEEC---CCCCEEEeec
Confidence            45789999999999999988532             2789999999999999999999999999994   5567999999


Q ss_pred             cceecCCCCC---Cccceeeccceecccc
Q psy14897         73 GLAKNVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                      |++.......   ......+|..|.+||+
T Consensus       184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~  212 (321)
T 2qkw_B          184 GISKKGTELDQTHLSTVVKGTLGYIDPEY  212 (321)
T ss_dssp             TTCEECSSSSCCCCBCCCEEETTTCCHHH
T ss_pred             ccccccccccccccccccCCCccccCHHH
Confidence            9998654321   2233467888999884

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.69  E-value=1.8e-17  Score=106.00  Aligned_cols=89  Identities=20%  Similarity=0.315  Sum_probs=70.8

Q ss_pred             CeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ..++||||+ +++|.+++...          .++.|++.++.|||+++++|+|+++.|+++... ....+++.|||+++.
T Consensus       126 ~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~-~~~~~kl~DFG~a~~  203 (364)
T 3op5_A          126 YRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK-NPDQVYLVDYGLAYR  203 (364)
T ss_dssp             EEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESS-CTTCEEECCCTTCEE
T ss_pred             eEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecC-CCCeEEEEECCccee
Confidence            479999999 99999988643          278999999999999999999999999999521 345699999999987


Q ss_pred             CCCCCC--------ccceeeccceecccc
Q psy14897         78 VPSSPS--------YERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~--------~~~~~~t~~~~~~~~   98 (99)
                      +.....        ....++|..|.+||+
T Consensus       204 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  232 (364)
T 3op5_A          204 YCPEGVHKAYAADPKRCHDGTIEFTSIDA  232 (364)
T ss_dssp             SSGGGCCCCSSCCSSCCCCCCTTTCCHHH
T ss_pred             cccCCcccccccCcccccCCCCCccCHHH
Confidence            643211        133458888888874

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.69  E-value=8.2e-17  Score=100.69  Aligned_cols=87  Identities=26%  Similarity=0.420  Sum_probs=73.8

Q ss_pred             CeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ..++||||+.+ +|.+++...           .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||+++
T Consensus        93 ~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg~a~  168 (308)
T 3g33_A           93 KVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGTVKLADFGLAR  168 (308)
T ss_dssp             EEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEEC---TTSCEEECSCSCTT
T ss_pred             eEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc---CCCCEEEeeCcccc
Confidence            47899999984 888877542           2789999999999999999999999999994   55679999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...........++|..|.+||+
T Consensus       169 ~~~~~~~~~~~~gt~~y~aPE~  190 (308)
T 3g33_A          169 IYSYQMALTPVVVTLWYRAPEV  190 (308)
T ss_dssp             TSTTCCCSGGGGCCCSSCCHHH
T ss_pred             ccCCCcccCCccccccccCchH
Confidence            8766666666788999999985

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.69  E-value=5.7e-17  Score=102.44  Aligned_cols=90  Identities=17%  Similarity=0.215  Sum_probs=69.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+++|+|.+++...          .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a  198 (325)
T 3kul_A          122 GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVD---SNLVCKVSDFGLS  198 (325)
T ss_dssp             GGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCSSC
T ss_pred             CCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEC---CCCCEEECCCCcc
Confidence            35689999999999999998543          2789999999999999999999999999994   5567999999999


Q ss_pred             ecCCCCCCc----cceeeccceecccc
Q psy14897         76 KNVPSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      +.+......    ....+|..|.+||+
T Consensus       199 ~~~~~~~~~~~~~~~~~~t~~y~aPE~  225 (325)
T 3kul_A          199 RVLEDDPDAAYTTTGGKIPIRWTAPEA  225 (325)
T ss_dssp             EECC----CCEECC---CCGGGSCHHH
T ss_pred             cccccCccceeeccCCCCcccccCHhH
Confidence            877544321    11223446778874

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.69  E-value=5.1e-17  Score=102.58  Aligned_cols=92  Identities=27%  Similarity=0.404  Sum_probs=71.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCC--CCeEEEeecc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKR--GNLVYIIDFG   73 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~--~~~~~l~d~g   73 (99)
                      .+..++||||+ +++|.+++...          .++.|++.++.|||+++++|+|++++|+++..+..  ...+++.|||
T Consensus        77 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg  155 (330)
T 2izr_A           77 GKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA  155 (330)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred             CCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence            35679999999 89999988642          27899999999999999999999999999952211  1129999999


Q ss_pred             ceecCCCCCC--------ccceeeccceecccc
Q psy14897         74 LAKNVPSSPS--------YERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~--------~~~~~~t~~~~~~~~   98 (99)
                      +++.+.....        ....+||..|.+||+
T Consensus       156 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  188 (330)
T 2izr_A          156 LAKEYIDPETKKHIPYREHKSLTGTARYMSINT  188 (330)
T ss_dssp             TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHH
T ss_pred             cceeeecCCCCccccccccCCcCCCccccChHH
Confidence            9987644322        234578889998874

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.69  E-value=4.1e-17  Score=103.51  Aligned_cols=91  Identities=22%  Similarity=0.331  Sum_probs=61.6

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ...++||||+.+|+|.+++..+           .++.|++.++.|||+++++|+|+++.|+++..+.....+++.|||++
T Consensus        99 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~  178 (336)
T 3fhr_A           99 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA  178 (336)
T ss_dssp             EEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             ceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence            3479999999999999988643           27899999999999999999999999999953333556999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ....... ....++|..|.+||+
T Consensus       179 ~~~~~~~-~~~~~~t~~y~aPE~  200 (336)
T 3fhr_A          179 KETTQNA-LQTPCYTPYYVAPEV  200 (336)
T ss_dssp             EEC--------------------
T ss_pred             eeccccc-cccCCCCcCccChhh
Confidence            8765432 244577888999885

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.69  E-value=8e-17  Score=99.26  Aligned_cols=90  Identities=20%  Similarity=0.249  Sum_probs=71.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCC----------
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGK----------   62 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~----------   62 (99)
                      ++..++||||+++|+|.+++...             .++.|++.++.|+|+++++|+|++++|+++..+.          
T Consensus        83 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~  162 (289)
T 1x8b_A           83 DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGD  162 (289)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-------------
T ss_pred             CCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccc
Confidence            45789999999999999988642             2789999999999999999999999999995221          


Q ss_pred             ------CCCeEEEeeccceecCCCCCCccceeeccceecccc
Q psy14897         63 ------RGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        63 ------~~~~~~l~d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                            ....+++.|||.+.......   ...+|..|.+||+
T Consensus       163 ~~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~  201 (289)
T 1x8b_A          163 EDDWASNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEV  201 (289)
T ss_dssp             -------CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHH
T ss_pred             cccccCCceEEEEcccccccccCCcc---ccCCCccccChhH
Confidence                  33468999999998775443   2457888888874

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.68  E-value=6.4e-17  Score=104.10  Aligned_cols=89  Identities=22%  Similarity=0.332  Sum_probs=73.0

Q ss_pred             CCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      ..+++||||+.+ +|.+.+..             ..++.|++.++.|||+++++|+|+++.|+++.  .....+++.|||
T Consensus       111 ~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~--~~~~~~kl~Dfg  187 (383)
T 3eb0_A          111 KYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN--SKDNTLKLCDFG  187 (383)
T ss_dssp             CEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEE--TTTTEEEECCCT
T ss_pred             eEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEc--CCCCcEEEEECC
Confidence            348899999995 76666542             22789999999999999999999999999995  345679999999


Q ss_pred             ceecCCCCCCccceeeccceecccc
Q psy14897         74 LAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .++.+..........+|..|.+||+
T Consensus       188 ~a~~~~~~~~~~~~~~t~~y~aPE~  212 (383)
T 3eb0_A          188 SAKKLIPSEPSVAYICSRFYRAPEL  212 (383)
T ss_dssp             TCEECCTTSCCCCCCCCSSCCCHHH
T ss_pred             CCcccCCCCCCcCcccCCCccCHHH
Confidence            9998766665566678889999984

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.68  E-value=1.1e-16  Score=103.03  Aligned_cols=90  Identities=19%  Similarity=0.259  Sum_probs=72.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      ++..++||||+.+|+|.+++...                         .++.|++.++.|||+++++|+|+++.|+++. 
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-  225 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-  225 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-
T ss_pred             CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEc-
Confidence            45789999999999999988532                         2789999999999999999999999999994 


Q ss_pred             CCCCCeEEEeeccceecCCCCCC---ccceeeccceecccc
Q psy14897         61 GKRGNLVYIIDFGLAKNVPSSPS---YERHVTTQTTRIGRI   98 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~~~~~~~---~~~~~~t~~~~~~~~   98 (99)
                        ....++++|||+++.+.....   .....+|..|.+||+
T Consensus       226 --~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~  264 (382)
T 3tt0_A          226 --EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEA  264 (382)
T ss_dssp             --TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHH
T ss_pred             --CCCcEEEcccCcccccccccccccccCCCCCcceeCHHH
Confidence              456799999999987654321   223345667888874

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.68  E-value=7.8e-17  Score=103.41  Aligned_cols=86  Identities=33%  Similarity=0.509  Sum_probs=71.7

Q ss_pred             CCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ...++||||+ +++|.+.++...        ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+++..
T Consensus       103 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~~~  178 (367)
T 1cm8_A          103 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLARQA  178 (367)
T ss_dssp             CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEEC
T ss_pred             ceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEc---CCCCEEEEeeeccccc
Confidence            3569999999 779988876432        789999999999999999999999999994   4566999999999876


Q ss_pred             CCCCCccceeeccceecccc
Q psy14897         79 PSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...  ....++|.+|.+||+
T Consensus       179 ~~~--~~~~~~t~~y~aPE~  196 (367)
T 1cm8_A          179 DSE--MTGYVVTRWYRAPEV  196 (367)
T ss_dssp             CSS--CCSSCSCGGGCCTHH
T ss_pred             ccc--cCcCcCCCCcCCHHH
Confidence            543  244678999999985

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.68  E-value=1.7e-16  Score=102.10  Aligned_cols=90  Identities=18%  Similarity=0.207  Sum_probs=70.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+|+|.++++...          ++.|++.|+.|||+++++|+|+++.|+++.   ....++++|||++
T Consensus       184 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~---~~~~~kl~DfG~s  260 (377)
T 3cbl_A          184 KQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT---EKNVLKISDFGMS  260 (377)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCGGGC
T ss_pred             CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEc---CCCcEEECcCCCc
Confidence            457899999999999999886432          789999999999999999999999999994   5567999999999


Q ss_pred             ecCCCCCCc---cceeeccceecccc
Q psy14897         76 KNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      +........   ....++..|.+||+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~y~aPE~  286 (377)
T 3cbl_A          261 REEADGVYAASGGLRQVPVKWTAPEA  286 (377)
T ss_dssp             EECTTSEEECCSSCCEEEGGGSCHHH
T ss_pred             eecCCCceeecCCCCCCCcCcCCHhH
Confidence            875433211   11223556777774

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.68  E-value=7.4e-17  Score=101.36  Aligned_cols=90  Identities=21%  Similarity=0.297  Sum_probs=64.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc------------hHHHHHHHHHHHHhhCC--eeecCcCCCcEEEeeCCCCCeEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG------------KEDREWIGRIDYIHSRN--FIHRDIKPDNFLMGLGKRGNLVYIID   71 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~------------~~~~~i~~~l~~lh~~~--i~h~~l~~~~~l~~~~~~~~~~~l~d   71 (99)
                      .+..++||||+.+|+|.+.+...            .++.|++.++.|||+++  ++|+|+++.|+++.   ....+++.|
T Consensus       106 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~---~~~~~kL~D  182 (309)
T 3p86_A          106 PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVD---KKYTVKVCD  182 (309)
T ss_dssp             TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEEC---TTCCEEECC
T ss_pred             CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEe---CCCcEEECC
Confidence            45689999999999999988643            26789999999999999  99999999999994   556799999


Q ss_pred             ccceecCCCCC-Cccceeeccceecccc
Q psy14897         72 FGLAKNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        72 ~g~a~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ||+++...... ......+|..|.+||+
T Consensus       183 fg~a~~~~~~~~~~~~~~gt~~y~aPE~  210 (309)
T 3p86_A          183 FGLSRLKASTFLSSKSAAGTPEWMAPEV  210 (309)
T ss_dssp             CC-----------------CCTTSCHHH
T ss_pred             CCCCccccccccccccCCCCccccChhh
Confidence            99997654332 2244578888888885

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.68  E-value=1e-16  Score=99.44  Aligned_cols=92  Identities=43%  Similarity=0.670  Sum_probs=72.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+ +++|.+.+...          .++.|++.++.|+|+++++|+|+++.|+++........+++.|||.+
T Consensus        77 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~  155 (296)
T 3uzp_A           77 GDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA  155 (296)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred             CCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence            34579999999 88999988621          27899999999999999999999999999942224556999999999


Q ss_pred             ecCCCCCC--------ccceeeccceecccc
Q psy14897         76 KNVPSSPS--------YERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~--------~~~~~~t~~~~~~~~   98 (99)
                      ........        .....+|..|.+||+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  186 (296)
T 3uzp_A          156 KKYRDARTHQHIPYRENKNLTGTARYASINT  186 (296)
T ss_dssp             EECBCTTTCCBCCCCCSCCCCSCTTTCCHHH
T ss_pred             ccccccccccccccccccccccccccCChhh
Confidence            87654322        234567888888874

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.67  E-value=2.2e-16  Score=99.29  Aligned_cols=90  Identities=23%  Similarity=0.290  Sum_probs=73.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------hHHHHHHHHHHHHhhC---CeeecCcCCCcEEEeeCCCCCeEEE
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------KEDREWIGRIDYIHSR---NFIHRDIKPDNFLMGLGKRGNLVYI   69 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------~~~~~i~~~l~~lh~~---~i~h~~l~~~~~l~~~~~~~~~~~l   69 (99)
                      .+..++||||+.+|+|.+.+...             .++.|++.++.|+|++   +++|+|+++.|+++.   ....+++
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~---~~~~~kl  175 (326)
T 3uim_A           99 PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD---EEFEAVV  175 (326)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC---TTCCEEE
T ss_pred             CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC---CCCCEEe
Confidence            45689999999999999988642             2789999999999999   999999999999994   5567999


Q ss_pred             eeccceecCCCCCC--ccceeeccceecccc
Q psy14897         70 IDFGLAKNVPSSPS--YERHVTTQTTRIGRI   98 (99)
Q Consensus        70 ~d~g~a~~~~~~~~--~~~~~~t~~~~~~~~   98 (99)
                      .|||.+........  .....+|..|.+||+
T Consensus       176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~  206 (326)
T 3uim_A          176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY  206 (326)
T ss_dssp             CCCSSCEECCSSSSCEECCCCSCGGGCCHHH
T ss_pred             ccCccccccCcccccccccccCCcCccCHHH
Confidence            99999987654332  233457888999884

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.67  E-value=1.2e-16  Score=99.10  Aligned_cols=92  Identities=43%  Similarity=0.670  Sum_probs=72.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+ +++|.+.+...          .++.|++.++.|+|+++++|+|++++|+++........+++.|||.+
T Consensus        77 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a  155 (296)
T 4hgt_A           77 GDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA  155 (296)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred             CCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence            34578999999 88999988631          27899999999999999999999999999832224556999999999


Q ss_pred             ecCCCCCC--------ccceeeccceecccc
Q psy14897         76 KNVPSSPS--------YERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~--------~~~~~~t~~~~~~~~   98 (99)
                      +.......        .....+|..|.+||+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  186 (296)
T 4hgt_A          156 KKYRDARTHQHIPYRENKNLTGTARYASINT  186 (296)
T ss_dssp             EECBCTTTCCBCCCCCSCCCCSCGGGCCHHH
T ss_pred             eeccCcccCccCCCCcccccCCCccccchHH
Confidence            87654322        124467888888874

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.67  E-value=1.4e-16  Score=100.81  Aligned_cols=90  Identities=21%  Similarity=0.306  Sum_probs=72.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc--------------------------------hHHHHHHHHHHHHhhCCeeecCcCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG--------------------------------KEDREWIGRIDYIHSRNFIHRDIKP   53 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~--------------------------------~~~~~i~~~l~~lh~~~i~h~~l~~   53 (99)
                      .+..++||||+.+|+|.+++...                                .++.|++.++.|||+++++|+|++|
T Consensus       121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp  200 (344)
T 1rjb_A          121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAA  200 (344)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSG
T ss_pred             CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCh
Confidence            46789999999999999988642                                2789999999999999999999999


Q ss_pred             CcEEEeeCCCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         54 DNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        54 ~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      .|+++.   ....+++.|||++..+......   ....+|..|.+||+
T Consensus       201 ~NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~  245 (344)
T 1rjb_A          201 RNVLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPES  245 (344)
T ss_dssp             GGEEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHH
T ss_pred             hhEEEc---CCCcEEeCCCccCcccccCccceeccCccCccCccCHHH
Confidence            999995   5567999999999876443321   22345667888874

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.67  E-value=1.3e-16  Score=98.49  Aligned_cols=93  Identities=19%  Similarity=0.343  Sum_probs=70.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCC-CCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGK-RGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~-~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+++|.+++..+         .++.|++.++.|+|+++++|+|+++.|+++..+. ....+++.|||.+
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~  159 (283)
T 3bhy_A           80 KTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA  159 (283)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             CCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence            35689999999999999988542         2789999999999999999999999999995221 1226899999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .............++..|.+||+
T Consensus       160 ~~~~~~~~~~~~~~~~~y~aPE~  182 (283)
T 3bhy_A          160 HKIEAGNEFKNIFGTPEFVAPEI  182 (283)
T ss_dssp             EECC--------CCCGGGCCHHH
T ss_pred             eeccCCCcccccCCCcCccCcce
Confidence            88766554455678888888874

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.67  E-value=1.6e-16  Score=99.87  Aligned_cols=89  Identities=24%  Similarity=0.348  Sum_probs=70.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+ ++.+.+...          .++.|++.++.|||+++++|+|++++|+++.   ....+++.|||++
T Consensus        91 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a  166 (311)
T 3niz_A           91 ERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN---SDGALKLADFGLA  166 (311)
T ss_dssp             SSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTC
T ss_pred             CCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEEC---CCCCEEEccCcCc
Confidence            4578999999985 777766432          2789999999999999999999999999994   5566999999999


Q ss_pred             ecCCCC-CCccceeeccceecccc
Q psy14897         76 KNVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      +..... ......++|..|.+||+
T Consensus       167 ~~~~~~~~~~~~~~~t~~y~aPE~  190 (311)
T 3niz_A          167 RAFGIPVRSYTHEVVTLWYRAPDV  190 (311)
T ss_dssp             EETTSCCC---CCCCCCTTCCHHH
T ss_pred             eecCCCcccccCCcccCCcCCHHH
Confidence            876533 23344577888999884

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.67  E-value=3.1e-17  Score=102.88  Aligned_cols=87  Identities=23%  Similarity=0.386  Sum_probs=64.5

Q ss_pred             eEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          9 SCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      .++||||+++|+|.+++...         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++..+.
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~a~~~~  167 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIA  167 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE---TTSCEEECCCSCC----
T ss_pred             cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc---CCCCEEEeeccCccccc
Confidence            49999999999999988643         2789999999999999999999999999995   44569999999998764


Q ss_pred             CCC----Cccceeeccceecccc
Q psy14897         80 SSP----SYERHVTTQTTRIGRI   98 (99)
Q Consensus        80 ~~~----~~~~~~~t~~~~~~~~   98 (99)
                      ...    .....++|..|.+||+
T Consensus       168 ~~~~~~~~~~~~~gt~~y~aPE~  190 (311)
T 3ork_A          168 DSGNSVTQTAAVIGTAQYLSPEQ  190 (311)
T ss_dssp             --------------CCTTCCHHH
T ss_pred             ccccccccccccCcCcccCCHHH
Confidence            432    1223467888888875

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.67  E-value=1e-16  Score=106.31  Aligned_cols=92  Identities=38%  Similarity=0.610  Sum_probs=72.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+ +++|.+++..          ..++.|++.+|.|||+++++|+|+++.|+++........+++.|||++
T Consensus        75 ~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla  153 (483)
T 3sv0_A           75 GDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA  153 (483)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred             CCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcc
Confidence            35678999999 8899998863          127899999999999999999999999999943234567999999999


Q ss_pred             ecCCCCCCc--------cceeeccceecccc
Q psy14897         76 KNVPSSPSY--------ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~--------~~~~~t~~~~~~~~   98 (99)
                      +.+......        ...++|..|.+||+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~  184 (483)
T 3sv0_A          154 KKYRDTSTHQHIPYRENKNLTGTARYASVNT  184 (483)
T ss_dssp             EECBCTTTCCBCCCCCCCCCCSCTTTCCHHH
T ss_pred             eeccCCccccccccccccccCCCccccCHHH
Confidence            876544321        24577888888874

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.67  E-value=7.7e-17  Score=102.47  Aligned_cols=66  Identities=27%  Similarity=0.428  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         30 EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        30 ~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      ++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++..+......   ....+|..|.+||+
T Consensus       198 ~~~ql~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~  266 (359)
T 3vhe_A          198 YSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET  266 (359)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHH
T ss_pred             HHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCcEEEEeccceeeecccccchhccccCCCceeEChhh
Confidence            678999999999999999999999999994   4556999999999876443322   23456777888874

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.67  E-value=1.5e-16  Score=101.35  Aligned_cols=90  Identities=23%  Similarity=0.368  Sum_probs=72.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch-----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC-------------
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK-----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG-------------   61 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~-----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~-------------   61 (99)
                      .+..++||||+ +++|.+++....           ++.|++.++.|||+++++|+|++++|+++..+             
T Consensus       108 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~  186 (360)
T 3llt_A          108 YDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVT  186 (360)
T ss_dssp             TTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred             CCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccc
Confidence            35689999999 889998886432           78999999999999999999999999999421             


Q ss_pred             ---------CCCCeEEEeeccceecCCCCCCccceeeccceecccc
Q psy14897         62 ---------KRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        62 ---------~~~~~~~l~d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                               .....+++.|||++.......  ...++|..|.+||+
T Consensus       187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~--~~~~gt~~y~aPE~  230 (360)
T 3llt_A          187 DGKKIQIYRTKSTGIKLIDFGCATFKSDYH--GSIINTRQYRAPEV  230 (360)
T ss_dssp             TCCEEEEEEESCCCEEECCCTTCEETTSCC--CSCCSCGGGCCHHH
T ss_pred             ccccccccccCCCCEEEEeccCceecCCCC--cCccCcccccCcHH
Confidence                     124568999999998755433  34678889999985

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.67  E-value=9.4e-17  Score=98.83  Aligned_cols=90  Identities=22%  Similarity=0.351  Sum_probs=66.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+++...         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+.
T Consensus        83 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~~~  159 (276)
T 2h6d_A           83 PTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD---AHMNAKIADFGLSN  159 (276)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEEC---TTSCEEECCCCGGG
T ss_pred             CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEEC---CCCCEEEeeccccc
Confidence            35689999999999999988542         2789999999999999999999999999994   45569999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ............++..|.+||+
T Consensus       160 ~~~~~~~~~~~~~~~~y~aPE~  181 (276)
T 2h6d_A          160 MMSDGEFLRTSCGSPNYAAPEV  181 (276)
T ss_dssp             CCCC-------------CCTGG
T ss_pred             ccCCCcceecccCCccccCHHH
Confidence            7765544445577888888885

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.67  E-value=1.6e-16  Score=98.66  Aligned_cols=92  Identities=26%  Similarity=0.451  Sum_probs=71.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC--CCCCeEEEeecc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG--KRGNLVYIIDFG   73 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~--~~~~~~~l~d~g   73 (99)
                      ....++||||+ +++|.+++...          .++.|++.++.|+|+++++|+|+++.|+++..+  .....+++.|||
T Consensus        78 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg  156 (298)
T 1csn_A           78 GLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG  156 (298)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred             CceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence            35679999999 89999988642          278999999999999999999999999999522  122349999999


Q ss_pred             ceecCCCCCC--------ccceeeccceecccc
Q psy14897         74 LAKNVPSSPS--------YERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~--------~~~~~~t~~~~~~~~   98 (99)
                      ++..+.....        .....+|..|.+||+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  189 (298)
T 1csn_A          157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINT  189 (298)
T ss_dssp             TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHH
T ss_pred             cccccccccccccccccCccCCCCCcccCCchh
Confidence            9987654321        234567888888874

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.67  E-value=1.4e-16  Score=104.62  Aligned_cols=87  Identities=21%  Similarity=0.308  Sum_probs=68.6

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +..++||||+.+|+|.++++.+           .++.|++.++.|||+++++|+|+++.|+++.   ....++++|||++
T Consensus       260 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a  336 (450)
T 1k9a_A          260 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLT  336 (450)
T ss_dssp             SCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTSCEEECCCTTC
T ss_pred             CceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEC---CCCCEEEeeCCCc
Confidence            3689999999999999988642           2789999999999999999999999999994   5567999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +......  ....++..|.+||+
T Consensus       337 ~~~~~~~--~~~~~~~~y~aPE~  357 (450)
T 1k9a_A          337 KEASSTQ--DTGKLPVKWTAPEA  357 (450)
T ss_dssp             EECC--------CCCTTTSCHHH
T ss_pred             ccccccc--cCCCCCcceeCHHH
Confidence            8654332  22345666778774

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.67  E-value=2.1e-16  Score=99.48  Aligned_cols=89  Identities=21%  Similarity=0.388  Sum_probs=71.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEe
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYII   70 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~   70 (99)
                      ++..++||||+. |+|.+++...               .++.|++.++.|||+++++|+|++++|+++.   ....+++.
T Consensus        75 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~  150 (317)
T 2pmi_A           75 ENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN---KRGQLKLG  150 (317)
T ss_dssp             TTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEEC
T ss_pred             CCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEc---CCCCEEEC
Confidence            457899999998 4888877532               2678999999999999999999999999994   55669999


Q ss_pred             eccceecCCCC-CCccceeeccceecccc
Q psy14897         71 DFGLAKNVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        71 d~g~a~~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      |||++..+... ......++|..|.+||+
T Consensus       151 Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~  179 (317)
T 2pmi_A          151 DFGLARAFGIPVNTFSSEVVTLWYRAPDV  179 (317)
T ss_dssp             CCSSCEETTSCCCCCCCCCSCCTTCCHHH
T ss_pred             cCccceecCCCcccCCCCcccccccCchH
Confidence            99999876533 23344577888999884

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.67  E-value=7.8e-17  Score=100.18  Aligned_cols=89  Identities=22%  Similarity=0.307  Sum_probs=66.6

Q ss_pred             CCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++||||+.+|+|.+++....          ++.|++.++.|||+.+++|+|+++.|+++.   ....+++.|||++.
T Consensus        86 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~---~~~~~kl~Dfg~~~  162 (295)
T 3ugc_A           86 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGLTK  162 (295)
T ss_dssp             TSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCCSCC
T ss_pred             CceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEc---CCCeEEEccCcccc
Confidence            45899999999999999886432          789999999999999999999999999995   45679999999998


Q ss_pred             cCCCCCCc----cceeeccceecccc
Q psy14897         77 NVPSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      .+......    ....++..|.+||+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~aPE~  188 (295)
T 3ugc_A          163 VLPQDKEFFKVKEPGESPIFWYAPES  188 (295)
T ss_dssp             -------------CTTCGGGGCCHHH
T ss_pred             cccCCcceeeeccCCCCccceeCcHH
Confidence            76443221    12234555777774

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.67  E-value=9.8e-17  Score=103.28  Aligned_cols=90  Identities=17%  Similarity=0.193  Sum_probs=71.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++||||+.+|+|.+.+...           .++.|++.++.|||+++++|+|++++|+++.   ....+++.|||.
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~---~~~~~kl~dfg~  174 (389)
T 3gni_B           98 DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVYLSGLRS  174 (389)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCGGG
T ss_pred             CCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEccccc
Confidence            45689999999999999988643           2789999999999999999999999999994   556799999998


Q ss_pred             eecCCCC--------CCccceeeccceecccc
Q psy14897         75 AKNVPSS--------PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~--------~~~~~~~~t~~~~~~~~   98 (99)
                      +......        ......++|..|.+||+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  206 (389)
T 3gni_B          175 NLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV  206 (389)
T ss_dssp             CEECEETTEECSCBCCCCTTCTTTGGGSCHHH
T ss_pred             ceeeccccccccccccccccccccccccCHHH
Confidence            7654221        11122367777888874

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.66  E-value=1.2e-16  Score=103.29  Aligned_cols=88  Identities=26%  Similarity=0.334  Sum_probs=70.4

Q ss_pred             eEEEEEeeCCCCchhhhc------------cchHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          9 SCLVFPYSYGTKSGEQIS------------TGKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~l~------------~~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +++||||+.++.+.....            ...++.|++.++.|||+++++|+|++++|+++.  .....+++.|||+++
T Consensus       113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~--~~~~~~kL~DFG~a~  190 (394)
T 4e7w_A          113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD--PPSGVLKLIDFGSAK  190 (394)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCCTTCE
T ss_pred             EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEc--CCCCcEEEeeCCCcc
Confidence            789999998754332221            123789999999999999999999999999994  356679999999999


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+.........++|..|.+||+
T Consensus       191 ~~~~~~~~~~~~~t~~y~aPE~  212 (394)
T 4e7w_A          191 ILIAGEPNVSYICSRYYRAPEL  212 (394)
T ss_dssp             ECCTTCCCCSSCSCGGGCCHHH
T ss_pred             cccCCCCCcccccCcCccCHHH
Confidence            8766655566678999999984

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.66  E-value=6.3e-17  Score=102.83  Aligned_cols=91  Identities=21%  Similarity=0.327  Sum_probs=71.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ....++||||+ +++|.+++...         .++.|++.++.|||+++++|+|+++.|+++..+. ...+++.|||+++
T Consensus       124 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-~~~~kL~Dfg~a~  201 (345)
T 2v62_A          124 RSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKN-PDQVYLADYGLSY  201 (345)
T ss_dssp             CEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSS-TTSEEECCCTTCE
T ss_pred             CcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCC-CCcEEEEeCCCce
Confidence            45689999999 99999988753         2789999999999999999999999999996222 1269999999998


Q ss_pred             cCCCCC--------Cccceeeccceecccc
Q psy14897         77 NVPSSP--------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~--------~~~~~~~t~~~~~~~~   98 (99)
                      .+....        ......+|..|.+||+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  231 (345)
T 2v62_A          202 RYCPNGNHKQYQENPRKGHNGTIEFTSLDA  231 (345)
T ss_dssp             ESSGGGCCCCCCCCGGGCSCSCTTTCCHHH
T ss_pred             ecccccccccchhccccccCCCccccCHHH
Confidence            764321        1134467888888874

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.66  E-value=2.3e-16  Score=99.89  Aligned_cols=90  Identities=22%  Similarity=0.193  Sum_probs=73.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+.+..+         .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++.
T Consensus       113 ~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~---~~~~~kl~Dfg~~~  189 (335)
T 2owb_A          113 NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLAT  189 (335)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTCE
T ss_pred             CCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEc---CCCCEEEeeccCce
Confidence            35689999999999999887542         2789999999999999999999999999994   45669999999998


Q ss_pred             cCCCCC-Cccceeeccceecccc
Q psy14897         77 NVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      .+.... ......+|..|.+||+
T Consensus       190 ~~~~~~~~~~~~~gt~~y~aPE~  212 (335)
T 2owb_A          190 KVEYDGERKKVLCGTPNYIAPEV  212 (335)
T ss_dssp             ECCSTTCCBCCCCSCCSSCCHHH
T ss_pred             ecccCcccccccCCCccccCHHH
Confidence            765332 2344567888888874

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.66  E-value=1.4e-16  Score=102.59  Aligned_cols=90  Identities=18%  Similarity=0.219  Sum_probs=62.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+|+|.++++..          .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++
T Consensus       163 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~~~~kL~DFG~a  239 (373)
T 3c1x_A          163 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVKVADFGLA  239 (373)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCC---
T ss_pred             CCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEEC---CCCCEEEeecccc
Confidence            35689999999999999998643          2678999999999999999999999999994   5567999999999


Q ss_pred             ecCCCCCCc-----cceeeccceecccc
Q psy14897         76 KNVPSSPSY-----ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~-----~~~~~t~~~~~~~~   98 (99)
                      +.+......     ....++..|.+||+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~  267 (373)
T 3c1x_A          240 RDMYDKEFDSVHNKTGAKLPVKWMALES  267 (373)
T ss_dssp             ------------------CCGGGSCHHH
T ss_pred             ccccccccccccccCCCCCcccccChHH
Confidence            876433211     22234556777774

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.66  E-value=1.1e-16  Score=102.73  Aligned_cols=83  Identities=10%  Similarity=0.139  Sum_probs=68.1

Q ss_pred             eEEEEEeeCCCCchhhhccc----------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          9 SCLVFPYSYGTKSGEQISTG----------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~l~~~----------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      .++||||+ +|+|.+++...                .++.|++.++.|||+++++|+|++|.|+++.   ....++++||
T Consensus       175 ~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~---~~~~~kL~DF  250 (377)
T 3byv_A          175 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD---QRGGVFLTGF  250 (377)
T ss_dssp             EEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCG
T ss_pred             EEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEEec
Confidence            78999999 57999988631                2789999999999999999999999999995   4567999999


Q ss_pred             cceecCCCCCCccceeeccceecccc
Q psy14897         73 GLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |+++....  .....++ ..|.+||+
T Consensus       251 G~a~~~~~--~~~~~~g-~~y~aPE~  273 (377)
T 3byv_A          251 EHLVRDGA--RVVSSVS-RGFEPPEL  273 (377)
T ss_dssp             GGCEETTC--EEECCCC-TTCCCHHH
T ss_pred             hhheecCC--cccCCCC-cCccChhh
Confidence            99986433  2344566 88888875

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.66  E-value=1.9e-16  Score=99.80  Aligned_cols=90  Identities=24%  Similarity=0.280  Sum_probs=71.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ....++||||+++|+|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~~  174 (327)
T 3lxl_A           98 RQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE---SEAHVKIADFGLA  174 (327)
T ss_dssp             SCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCGGGC
T ss_pred             CceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEEC---CCCCEEEcccccc
Confidence            45588999999999999988642          2778999999999999999999999999995   4566999999999


Q ss_pred             ecCCCCCCc----cceeeccceecccc
Q psy14897         76 KNVPSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      .........    ....+|..|.+||+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~  201 (327)
T 3lxl_A          175 KLLPLDKDYYVVREPGQSPIFWYAPES  201 (327)
T ss_dssp             EECCTTCSEEECSSCCCSCGGGSCHHH
T ss_pred             eecccCCccceeeccCCccccccCHHH
Confidence            877544321    22345566888874

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.66  E-value=3.5e-16  Score=96.01  Aligned_cols=90  Identities=18%  Similarity=0.194  Sum_probs=70.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+++++|.+++...          .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~~l~Dfg~~  151 (268)
T 3sxs_A           75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVD---RDLCVKVSDFGMT  151 (268)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEEC---TTCCEEECCTTCE
T ss_pred             CCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEEC---CCCCEEEccCccc
Confidence            45689999999999999988643          2789999999999999999999999999994   5567999999999


Q ss_pred             ecCCCCCCc--cceeeccceecccc
Q psy14897         76 KNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      .........  ....++..|.+||+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~y~aPE~  176 (268)
T 3sxs_A          152 RYVLDDQYVSSVGTKFPVKWSAPEV  176 (268)
T ss_dssp             EECCTTCEEECCSCCCCGGGCCHHH
T ss_pred             eecchhhhhcccCCCcCcccCCHHH
Confidence            876544321  11223445778774

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.66  E-value=1.9e-16  Score=105.07  Aligned_cols=90  Identities=17%  Similarity=0.249  Sum_probs=70.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ....++||||+.+|+|.++++..           .++.|++.++.|||+++++|+|+++.|+++.   ....++++|||+
T Consensus       288 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~  364 (495)
T 1opk_A          288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG---ENHLVKVADFGL  364 (495)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---GGGCEEECCTTC
T ss_pred             CCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEC---CCCcEEEeeccc
Confidence            45789999999999999998642           2678999999999999999999999999994   455699999999


Q ss_pred             eecCCCCCCc--cceeeccceecccc
Q psy14897         75 AKNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      ++.+......  ....++..|.+||+
T Consensus       365 a~~~~~~~~~~~~~~~~~~~y~aPE~  390 (495)
T 1opk_A          365 SRLMTGDTYTAHAGAKFPIKWTAPES  390 (495)
T ss_dssp             EECCTTCCEECCTTCCCCGGGCCHHH
T ss_pred             ceeccCCceeecCCCcCCcceeCHhH
Confidence            9876443211  12233456777774

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.66  E-value=1.8e-16  Score=103.28  Aligned_cols=87  Identities=24%  Similarity=0.304  Sum_probs=70.0

Q ss_pred             eEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          9 SCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +++||||+.+ ++.+.+..             ..++.|++.++.|||+++++|+|++++|+++.  .....+++.|||++
T Consensus       128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~--~~~~~~kl~DFG~a  204 (420)
T 1j1b_A          128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSA  204 (420)
T ss_dssp             EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEE--TTTTEEEECCCTTC
T ss_pred             EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEe--CCCCeEEeccchhh
Confidence            6799999986 45444321             23789999999999999999999999999995  34456899999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.+.........++|.+|.+||+
T Consensus       205 ~~~~~~~~~~~~~~t~~y~aPE~  227 (420)
T 1j1b_A          205 KQLVRGEPNVSYICSRYYRAPEL  227 (420)
T ss_dssp             EECCTTCCCCSCCSCTTSCCHHH
T ss_pred             hhcccCCCceeeeeCCCcCCHHH
Confidence            98766555556688999999985

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.66  E-value=6.4e-17  Score=100.04  Aligned_cols=91  Identities=19%  Similarity=0.266  Sum_probs=62.3

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .++..++||||+.+|+|.+++..+.          ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||+
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~  162 (281)
T 1mp8_A           86 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGL  162 (281)
T ss_dssp             CSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECC---
T ss_pred             ccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEEC---CCCCEEECcccc
Confidence            3467899999999999999886432          679999999999999999999999999995   446799999999


Q ss_pred             eecCCCCCCc--cceeeccceecccc
Q psy14897         75 AKNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      ++........  ....++..|.+||+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~aPE~  188 (281)
T 1mp8_A          163 SRYMEDSTYYKASKGKLPIKWMAPES  188 (281)
T ss_dssp             ----------------CCGGGCCHHH
T ss_pred             ccccCcccccccccCCCcccccChhh
Confidence            9876543322  22234556888874

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.66  E-value=1.1e-16  Score=100.87  Aligned_cols=90  Identities=19%  Similarity=0.224  Sum_probs=69.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      .+..++||||+.+|+|.+++...                         .++.|++.++.|||+++++|+|+++.|+++. 
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-  176 (327)
T 1fvr_A           98 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG-  176 (327)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-
T ss_pred             CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEc-
Confidence            35689999999999999988542                         2789999999999999999999999999994 


Q ss_pred             CCCCCeEEEeeccceecCCCCCCccceeeccceecccc
Q psy14897         61 GKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                        ....+++.|||+++............++..|.+||+
T Consensus       177 --~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~  212 (327)
T 1fvr_A          177 --ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES  212 (327)
T ss_dssp             --GGGCEEECCTTCEESSCEECCC----CCTTTCCHHH
T ss_pred             --CCCeEEEcccCcCccccccccccCCCCCccccChhh
Confidence              445699999999985443332233445666777774

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.66  E-value=9.2e-17  Score=105.50  Aligned_cols=90  Identities=18%  Similarity=0.252  Sum_probs=70.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.+|+|.+++...           .++.|++.++.|||+++++|+|+++.|+++.   ....++++|||+
T Consensus       254 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DFG~  330 (454)
T 1qcf_A          254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCKIADFGL  330 (454)
T ss_dssp             SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC---TTCCEEECSTTG
T ss_pred             CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEC---CCCcEEEeeCCC
Confidence            45789999999999999998643           2689999999999999999999999999994   556799999999


Q ss_pred             eecCCCCCC--ccceeeccceecccc
Q psy14897         75 AKNVPSSPS--YERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~--~~~~~~t~~~~~~~~   98 (99)
                      ++.+.....  .....++..|.+||+
T Consensus       331 a~~~~~~~~~~~~~~~~~~~y~aPE~  356 (454)
T 1qcf_A          331 ARVIEDNEYTAREGAKFPIKWTAPEA  356 (454)
T ss_dssp             GGGBCCHHHHTTCSSSSCGGGSCHHH
T ss_pred             ceEcCCCceeccCCCcccccccCHHH
Confidence            987643211  111233456777774

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.66  E-value=1.4e-16  Score=98.79  Aligned_cols=90  Identities=29%  Similarity=0.400  Sum_probs=67.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+++|+|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~  163 (303)
T 1zy4_A           87 KSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID---ESRNVKIGDFGLA  163 (303)
T ss_dssp             EEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECCCCCC
T ss_pred             CCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEc---CCCCEEEeeCcch
Confidence            35689999999999999988632          2789999999999999999999999999994   5566999999998


Q ss_pred             ecCCCC---------------CCccceeeccceecccc
Q psy14897         76 KNVPSS---------------PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~---------------~~~~~~~~t~~~~~~~~   98 (99)
                      ......               .......+|..|.+||+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  201 (303)
T 1zy4_A          164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEV  201 (303)
T ss_dssp             SCTTC-------------------------CTTSCHHH
T ss_pred             hhcccccchhccccccccccccccccCCCcccccCccc
Confidence            765422               12234467788888874

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.66  E-value=1.7e-16  Score=102.03  Aligned_cols=90  Identities=17%  Similarity=0.242  Sum_probs=62.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+|+|.+++....          ++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++
T Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a  194 (373)
T 2qol_A          118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN---SNLVCKVSDFGLG  194 (373)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCC---
T ss_pred             CCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEc---CCCCEEECcCccc
Confidence            457899999999999999986432          789999999999999999999999999994   5567999999999


Q ss_pred             ecCCCCCCc----cceeeccceecccc
Q psy14897         76 KNVPSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      +.+......    ....++..|.+||+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~  221 (373)
T 2qol_A          195 RVLEDDPEAAYTTRGGKIPIRWTSPEA  221 (373)
T ss_dssp             -------------------CTTSCHHH
T ss_pred             cccccCCccceeccCCCcCCCccChhh
Confidence            876543211    11123445777774

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.66  E-value=7.4e-17  Score=99.86  Aligned_cols=90  Identities=11%  Similarity=0.131  Sum_probs=70.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCC-----CeEEEe
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRG-----NLVYII   70 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~-----~~~~l~   70 (99)
                      ++..++||||+.+|+|.+++....          ++.|++.++.|||+++++|+|++++|+++..+...     ..+++.
T Consensus        84 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~  163 (289)
T 4fvq_A           84 GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS  163 (289)
T ss_dssp             TTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred             CCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeec
Confidence            457899999999999999886432          78999999999999999999999999999532211     128999


Q ss_pred             eccceecCCCCCCccceeeccceecccc
Q psy14897         71 DFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        71 d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |||.+......   ....+|..|.+||+
T Consensus       164 Dfg~~~~~~~~---~~~~~~~~y~aPE~  188 (289)
T 4fvq_A          164 DPGISITVLPK---DILQERIPWVPPEC  188 (289)
T ss_dssp             CCCSCTTTSCH---HHHHHTTTTSCHHH
T ss_pred             cCcccccccCc---cccCCcCcccCHHH
Confidence            99998765432   23456777888874

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.66  E-value=1.6e-16  Score=100.34  Aligned_cols=88  Identities=23%  Similarity=0.226  Sum_probs=72.9

Q ss_pred             CeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHh--------hCCeeecCcCCCcEEEeeCCCCCeEEEee
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIH--------SRNFIHRDIKPDNFLMGLGKRGNLVYIID   71 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh--------~~~i~h~~l~~~~~l~~~~~~~~~~~l~d   71 (99)
                      ..++||||+.+|+|.+++...        .++.|++.++.|+|        +.+++|+|+++.|+++.   ....+++.|
T Consensus       114 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~---~~~~~kL~D  190 (342)
T 1b6c_B          114 QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTCCIAD  190 (342)
T ss_dssp             CEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEEC---TTSCEEECC
T ss_pred             eeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEEC---CCCCEEEEE
Confidence            689999999999999998653        27899999999999        89999999999999994   455799999


Q ss_pred             ccceecCCCCCC-----ccceeeccceecccc
Q psy14897         72 FGLAKNVPSSPS-----YERHVTTQTTRIGRI   98 (99)
Q Consensus        72 ~g~a~~~~~~~~-----~~~~~~t~~~~~~~~   98 (99)
                      ||++........     .....+|..|.+||+
T Consensus       191 fg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  222 (342)
T 1b6c_B          191 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV  222 (342)
T ss_dssp             CTTCEEEETTTTEEEECCCSCCCCGGGCCHHH
T ss_pred             CCCceeccccccccccccccCCcCcccCCHhh
Confidence            999987654431     233467888998885

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.66  E-value=1.9e-16  Score=98.58  Aligned_cols=89  Identities=22%  Similarity=0.321  Sum_probs=71.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++||||+.+|+|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+.
T Consensus        98 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~  174 (302)
T 4e5w_A           98 NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLTK  174 (302)
T ss_dssp             CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCCTTCE
T ss_pred             ceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEc---CCCCEEECcccccc
Confidence            5689999999999999988432          2789999999999999999999999999995   44579999999998


Q ss_pred             cCCCCCCc----cceeeccceecccc
Q psy14897         77 NVPSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      .+......    ....+|..|.+||+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~y~aPE~  200 (302)
T 4e5w_A          175 AIETDKEYYTVKDDRDSPVFWYAPEC  200 (302)
T ss_dssp             ECCTTCCEEECCCCTTCCGGGCCHHH
T ss_pred             cccCCCcceeccCCCCCCccccCCee
Confidence            77554321    22345566788874

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.66  E-value=1.3e-16  Score=99.77  Aligned_cols=90  Identities=27%  Similarity=0.432  Sum_probs=67.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+.+...         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+.
T Consensus        74 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~  150 (311)
T 4agu_A           74 KRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT---KHSVIKLCDFGFAR  150 (311)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             CCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEc---CCCCEEEeeCCCch
Confidence            35689999999999888876532         2789999999999999999999999999994   55679999999998


Q ss_pred             cCCCCC-Cccceeeccceecccc
Q psy14897         77 NVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ...... .....++|..|.+||+
T Consensus       151 ~~~~~~~~~~~~~~~~~y~aPE~  173 (311)
T 4agu_A          151 LLTGPSDYYDDEVATRWYRSPEL  173 (311)
T ss_dssp             ECC------------GGGCCHHH
T ss_pred             hccCcccccCCCcCCccccChHH
Confidence            765432 2345577888888874

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.66  E-value=2.1e-16  Score=100.04  Aligned_cols=92  Identities=24%  Similarity=0.424  Sum_probs=69.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------------------------------------------chHHHHHHH
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------------------------------------------GKEDREWIG   36 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------------------------------------------~~~~~~i~~   36 (99)
                      .+..++||||+.+|+|.+.+..                                                 ..++.|++.
T Consensus       100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~  179 (345)
T 3hko_A          100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS  179 (345)
T ss_dssp             SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence            3568999999999999988741                                                 127889999


Q ss_pred             HHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCCC-----Cccceeeccceecccc
Q psy14897         37 RIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSP-----SYERHVTTQTTRIGRI   98 (99)
Q Consensus        37 ~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~-----~~~~~~~t~~~~~~~~   98 (99)
                      ++.|||+++++|+|+++.|+++..+ ....+++.|||.+..+....     ......+|..|.+||+
T Consensus       180 ~l~~LH~~~ivH~Dlkp~NIll~~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~  245 (345)
T 3hko_A          180 ALHYLHNQGICHRDIKPENFLFSTN-KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEV  245 (345)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESCS-SSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHH
T ss_pred             HHHHHHHCCccccCCChhhEEEecC-CCceEEEeeccccccccccCccccccccccCCCccccCchh
Confidence            9999999999999999999999421 12269999999998653211     1234567888988884

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.65  E-value=2.2e-16  Score=98.07  Aligned_cols=89  Identities=26%  Similarity=0.405  Sum_probs=69.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+ ++.+.+..          ..++.|++.++.|+|+++++|+|++++|+++.   ....+++.|||.+
T Consensus        73 ~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~---~~~~~kl~Dfg~~  148 (292)
T 3o0g_A           73 DKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLA  148 (292)
T ss_dssp             TTEEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             CCEEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccc
Confidence            4568999999986 44444432          23789999999999999999999999999994   5566999999999


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ....... ......+|..|.+||+
T Consensus       149 ~~~~~~~~~~~~~~~t~~y~aPE~  172 (292)
T 3o0g_A          149 RAFGIPVRCYSAEVVTLWYRPPDV  172 (292)
T ss_dssp             EECCSCCSCCCSCCSCGGGCCHHH
T ss_pred             eecCCccccccCCccccCCcChHH
Confidence            8765332 3344577888999884

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.65  E-value=8.7e-17  Score=101.59  Aligned_cols=90  Identities=26%  Similarity=0.381  Sum_probs=70.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------------------------------hHHHHHHHHHHHHhhCCeeecCcC
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------------------------------KEDREWIGRIDYIHSRNFIHRDIK   52 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------------------------------~~~~~i~~~l~~lh~~~i~h~~l~   52 (99)
                      ++..++||||+.+|+|.+++...                                 .++.|++.++.|||+++++|+|++
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlk  201 (343)
T 1luf_A          122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA  201 (343)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            46789999999999999988642                                 178999999999999999999999


Q ss_pred             CCcEEEeeCCCCCeEEEeeccceecCCCCC---Cccceeeccceecccc
Q psy14897         53 PDNFLMGLGKRGNLVYIIDFGLAKNVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        53 ~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                      +.|+++.   ....+++.|||++..+....   ......+|..|.+||+
T Consensus       202 p~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~  247 (343)
T 1luf_A          202 TRNCLVG---ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPES  247 (343)
T ss_dssp             GGGEEEC---GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHH
T ss_pred             cceEEEC---CCCeEEEeecCCCcccccCccccccCCCcccceecChhh
Confidence            9999994   44569999999987653322   1123355677888874

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.65  E-value=4.8e-16  Score=96.57  Aligned_cols=90  Identities=22%  Similarity=0.193  Sum_probs=72.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+.+..+         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+.
T Consensus        87 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~  163 (294)
T 2rku_A           87 NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLAT  163 (294)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCE
T ss_pred             CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEc---CCCCEEEEeccCce
Confidence            35689999999999999887542         2789999999999999999999999999994   55669999999998


Q ss_pred             cCCCCC-Cccceeeccceecccc
Q psy14897         77 NVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ...... ......+|..|.+||+
T Consensus       164 ~~~~~~~~~~~~~~~~~y~aPE~  186 (294)
T 2rku_A          164 KVEYDGERKKVLCGTPNYIAPEV  186 (294)
T ss_dssp             ECCSTTCCBCCCCSCCSSCCHHH
T ss_pred             ecccCccccccccCCCCcCCcch
Confidence            765332 2334567888888874

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.65  E-value=3.7e-16  Score=97.14  Aligned_cols=90  Identities=19%  Similarity=0.239  Sum_probs=69.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+|+|.+++....          ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        99 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~a  175 (298)
T 3f66_A           99 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLA  175 (298)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTCCEEECSCGGG
T ss_pred             CCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEC---CCCCEEECccccc
Confidence            456899999999999999886422          678999999999999999999999999994   5567999999999


Q ss_pred             ecCCCCCC-----ccceeeccceecccc
Q psy14897         76 KNVPSSPS-----YERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~-----~~~~~~t~~~~~~~~   98 (99)
                      ..+.....     .....+|..|.+||+
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~  203 (298)
T 3f66_A          176 RDMYDKEYYSVHNKTGAKLPVKWMALES  203 (298)
T ss_dssp             CCCSCGGGCBC-----CCBCGGGSCHHH
T ss_pred             ccccccchhccccccCCCCCccccChHH
Confidence            87644321     122234556777764

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.65  E-value=3.2e-16  Score=96.65  Aligned_cols=90  Identities=23%  Similarity=0.272  Sum_probs=61.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+++|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        83 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~---~~~~~kl~dfg~~  159 (278)
T 3cok_A           83 SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT---RNMNIKIADFGLA  159 (278)
T ss_dssp             SSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEEC---TTCCEEECCCTTC
T ss_pred             CCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEEEeecce
Confidence            35689999999999999888653          2789999999999999999999999999994   5566999999999


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ....... ......+|..|.+||+
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~  183 (278)
T 3cok_A          160 TQLKMPHEKHYTLCGTPNYISPEI  183 (278)
T ss_dssp             EECC--------------------
T ss_pred             eeccCCCCcceeccCCCCcCCcch
Confidence            8765332 2234567888888885

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.65  E-value=3.1e-16  Score=97.25  Aligned_cols=89  Identities=22%  Similarity=0.210  Sum_probs=72.6

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCC--eeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRN--FIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~--i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ...++||||+.+|+|.+++...         .++.|++.++.|||+.+  ++|+|+++.|+++.  .....+++.|||.+
T Consensus       102 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~--~~~~~~kl~Dfg~~  179 (290)
T 1t4h_A          102 KCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLA  179 (290)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGG
T ss_pred             ceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE--CCCCCEEEeeCCCc
Confidence            4589999999999999988642         27899999999999999  99999999999994  24557999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...... ......+|..|.+||+
T Consensus       180 ~~~~~~-~~~~~~~t~~y~aPE~  201 (290)
T 1t4h_A          180 TLKRAS-FAKAVIGTPEFMAPEM  201 (290)
T ss_dssp             GGCCTT-SBEESCSSCCCCCGGG
T ss_pred             cccccc-ccccccCCcCcCCHHH
Confidence            755433 2344568888999985

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.65  E-value=1.3e-16  Score=99.15  Aligned_cols=90  Identities=24%  Similarity=0.381  Sum_probs=65.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ....++||||+.+++|.+.+...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++
T Consensus        91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~  167 (289)
T 3og7_A           91 APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLA  167 (289)
T ss_dssp             SSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---TTTEEEECCCC--
T ss_pred             CCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC---CCCCEEEccceec
Confidence            35689999999999999888532          2789999999999999999999999999995   4567999999998


Q ss_pred             ecCCCC---CCccceeeccceecccc
Q psy14897         76 KNVPSS---PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~---~~~~~~~~t~~~~~~~~   98 (99)
                      ......   .......+|..|.+||+
T Consensus       168 ~~~~~~~~~~~~~~~~gt~~y~aPE~  193 (289)
T 3og7_A          168 TEKSRWSGSHQFEQLSGSILWMAPEV  193 (289)
T ss_dssp             ----------------CCCTTCCHHH
T ss_pred             cccccccccccccccCCCccccCchh
Confidence            765432   22234567888888874

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.65  E-value=5.3e-16  Score=97.56  Aligned_cols=89  Identities=27%  Similarity=0.366  Sum_probs=71.6

Q ss_pred             CCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ...++||||+.+|+|.+++....        ++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||.+...
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~---~~~~~kl~Dfg~a~~~  184 (318)
T 3lxp_A          108 ASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLD---NDRLVKIGDFGLAKAV  184 (318)
T ss_dssp             TEEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCGGGCEEC
T ss_pred             ceEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEc---CCCCEEECCccccccc
Confidence            46799999999999999987543        789999999999999999999999999994   5567999999999887


Q ss_pred             CCCCCc----cceeeccceecccc
Q psy14897         79 PSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      ......    ....++..|.+||+
T Consensus       185 ~~~~~~~~~~~~~~~~~~y~aPE~  208 (318)
T 3lxp_A          185 PEGHEYYRVREDGDSPVFWYAPEC  208 (318)
T ss_dssp             CTTCSEEEC---CCCCGGGCCHHH
T ss_pred             cccccccccccCCCCCceeeChHH
Confidence            654321    22345566778874

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.65  E-value=4.7e-16  Score=106.42  Aligned_cols=93  Identities=23%  Similarity=0.334  Sum_probs=78.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      ++..++||||+.+|+|.+++...            .++.|++.++.|+|+.+++|+|+++.|+++..+.....+++.|||
T Consensus        90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A           90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence            56789999999999999988642            278999999999999999999999999999644344568999999


Q ss_pred             ceecCCCCCCccceeeccceecccc
Q psy14897         74 LAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+.............+|..|.+||+
T Consensus       170 ~a~~~~~~~~~~~~~gt~~Y~APE~  194 (676)
T 3qa8_A          170 YAKELDQGELCTEFVGTLQYLAPEL  194 (676)
T ss_dssp             CCCBTTSCCCCCCCCSCCTTCSSCS
T ss_pred             cccccccccccccccCCcccCChHH
Confidence            9998766655566688899999985

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.65  E-value=4.7e-16  Score=97.75  Aligned_cols=90  Identities=23%  Similarity=0.392  Sum_probs=71.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCC-----------
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKR-----------   63 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~-----------   63 (99)
                      ++..++||||+ +++|.+.+..+           .++.|++.++.|+|+++++|+|+++.|+++.....           
T Consensus        89 ~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~  167 (339)
T 1z57_A           89 HGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD  167 (339)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred             CCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence            35689999999 78998887543           27899999999999999999999999999852110           


Q ss_pred             -----CCeEEEeeccceecCCCCCCccceeeccceecccc
Q psy14897         64 -----GNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        64 -----~~~~~l~d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                           ...+++.|||.+.......  ...++|..|.+||+
T Consensus       168 ~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~gt~~y~aPE~  205 (339)
T 1z57_A          168 ERTLINPDIKVVDFGSATYDDEHH--STLVSTRHYRAPEV  205 (339)
T ss_dssp             EEEESCCCEEECCCSSCEETTSCC--CSSCSCGGGCCHHH
T ss_pred             cccccCCCceEeeCcccccCcccc--ccccCCccccChHH
Confidence                 3458999999998754432  34578889999885

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.65  E-value=1.3e-16  Score=101.50  Aligned_cols=89  Identities=15%  Similarity=0.279  Sum_probs=71.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCC--eEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGN--LVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~--~~~l~d~   72 (99)
                      ++..++||||+ +++|.+++...           .++.|++.++.|||+++++|+|+++.|+++.   ...  .+++.||
T Consensus       130 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~---~~~~~~~kl~Df  205 (352)
T 2jii_A          130 DKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD---PEDQSQVTLAGY  205 (352)
T ss_dssp             TTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEE---TTEEEEEEECCG
T ss_pred             CcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEc---CCCCceEEEecC
Confidence            46789999999 99999998753           1789999999999999999999999999995   333  7999999


Q ss_pred             cceecCCCCC--------Cccceeeccceecccc
Q psy14897         73 GLAKNVPSSP--------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~--------~~~~~~~t~~~~~~~~   98 (99)
                      |+++.+....        ......+|..|.+||+
T Consensus       206 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  239 (352)
T 2jii_A          206 GFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDL  239 (352)
T ss_dssp             GGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHH
T ss_pred             cceeeccCCCccccccccccccccCCccccCHHH
Confidence            9998764321        1133467888888874

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.64  E-value=3.9e-16  Score=99.17  Aligned_cols=89  Identities=26%  Similarity=0.412  Sum_probs=69.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+ ++.+.+..          ..++.|++.++.|||+++++|+|++++|+++.   ....+++.|||++
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~a  171 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLA  171 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc---CCCCEEEccchhc
Confidence            4568999999986 66555543          23789999999999999999999999999994   5567999999999


Q ss_pred             ecCCCC-----CCccceeeccceecccc
Q psy14897         76 KNVPSS-----PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~-----~~~~~~~~t~~~~~~~~   98 (99)
                      +.+...     ......++|..|.+||+
T Consensus       172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~  199 (351)
T 3mi9_A          172 RAFSLAKNSQPNRYTNRVVTLWYRPPEL  199 (351)
T ss_dssp             EECCCCSSSSCCCCCSSCSCGGGCCHHH
T ss_pred             ccccccccccccccCCcccccCccCchh
Confidence            876422     22344567888999884

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.64  E-value=2.4e-16  Score=98.80  Aligned_cols=89  Identities=25%  Similarity=0.399  Sum_probs=65.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc------------hHHHHHHHHHHHHhh---CCeeecCcCCCcEEEeeCCCCCeEEEe
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG------------KEDREWIGRIDYIHS---RNFIHRDIKPDNFLMGLGKRGNLVYII   70 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~------------~~~~~i~~~l~~lh~---~~i~h~~l~~~~~l~~~~~~~~~~~l~   70 (99)
                      .+..++||||+++|+|.+++...            .++.|++.++.|+|+   ++++|+|+++.|+++.  ..+..+++.
T Consensus        71 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~--~~~~~~kl~  148 (307)
T 2eva_A           71 LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV--AGGTVLKIC  148 (307)
T ss_dssp             TTTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEE--TTTTEEEEC
T ss_pred             cCCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEe--CCCCEEEEc
Confidence            35689999999999999988642            267899999999999   8999999999999995  344458999


Q ss_pred             eccceecCCCCCCccceeeccceecccc
Q psy14897         71 DFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        71 d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |||.+.......  ....+|..|.+||+
T Consensus       149 Dfg~~~~~~~~~--~~~~gt~~y~aPE~  174 (307)
T 2eva_A          149 DFGTACDIQTHM--TNNKGSAAWMAPEV  174 (307)
T ss_dssp             CCCC--------------CCTTSSCHHH
T ss_pred             cccccccccccc--ccCCCCCceEChhh
Confidence            999997654332  33467888888874

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.64  E-value=2.2e-16  Score=100.62  Aligned_cols=88  Identities=23%  Similarity=0.274  Sum_probs=62.4

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++||||+. |+|.+.+...          .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||.+.
T Consensus       107 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~~~  182 (362)
T 3pg1_A          107 HKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA---DNNDITICDFNLAR  182 (362)
T ss_dssp             CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECCTTC--
T ss_pred             ceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEc---CCCCEEEEecCccc
Confidence            35799999998 5777766533          2789999999999999999999999999994   55669999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ............+|..|.+||+
T Consensus       183 ~~~~~~~~~~~~~t~~y~aPE~  204 (362)
T 3pg1_A          183 EDTADANKTHYVTHRWYRAPEL  204 (362)
T ss_dssp             -------------CGGGCCHHH
T ss_pred             ccccccccceecccceecCcHH
Confidence            7655555556678888999884

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.64  E-value=1.9e-16  Score=102.32  Aligned_cols=88  Identities=18%  Similarity=0.315  Sum_probs=68.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+++||| +.+++|.+++...         .++.|++.++.|||+++++|+|++|+|+++.    ...+++.|||+++
T Consensus       128 ~~~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~----~~~~kl~DFG~a~  202 (390)
T 2zmd_A          128 DQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIAN  202 (390)
T ss_dssp             SSEEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES----SSCEEECCCSSSC
T ss_pred             CCEEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE----CCeEEEEecCccc
Confidence            456899999 5677998887643         2789999999999999999999999999993    2459999999998


Q ss_pred             cCCCCCC---ccceeeccceecccc
Q psy14897         77 NVPSSPS---YERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~---~~~~~~t~~~~~~~~   98 (99)
                      .+.....   ....++|..|.+||+
T Consensus       203 ~~~~~~~~~~~~~~~gt~~y~aPE~  227 (390)
T 2zmd_A          203 QMQPDTTSVVKDSQVGAVNYMPPEA  227 (390)
T ss_dssp             CC---------CCSCCCGGGCCHHH
T ss_pred             cccCCCccccCCCCCcCCCccChHH
Confidence            7654321   234578999999985

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.64  E-value=6.5e-16  Score=96.51  Aligned_cols=90  Identities=19%  Similarity=0.250  Sum_probs=71.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------------------------------hHHHHHHHHHHHHhhCCeeecCcC
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------------------------------KEDREWIGRIDYIHSRNFIHRDIK   52 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------------------------------~~~~~i~~~l~~lh~~~i~h~~l~   52 (99)
                      ++..++||||+.+|+|.+++...                                 .++.|++.++.|+|+++++|+|++
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dik  177 (314)
T 2ivs_A           98 DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLA  177 (314)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccc
Confidence            45789999999999999988531                                 268999999999999999999999


Q ss_pred             CCcEEEeeCCCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         53 PDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        53 ~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      +.|+++.   ....+++.|||++.........   ....++..|.+||+
T Consensus       178 p~NIli~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  223 (314)
T 2ivs_A          178 ARNILVA---EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIES  223 (314)
T ss_dssp             GGGEEEE---TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHH
T ss_pred             hheEEEc---CCCCEEEccccccccccccccceeccCCCCcccccChhh
Confidence            9999995   5567999999999876544322   22234556778774

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.64  E-value=2e-16  Score=97.22  Aligned_cols=90  Identities=20%  Similarity=0.307  Sum_probs=70.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+++|+|.+++....          ++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~  153 (269)
T 4hcu_A           77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMT  153 (269)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---GGGCEEECCTTGG
T ss_pred             CCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEc---CCCCEEecccccc
Confidence            456899999999999999885422          779999999999999999999999999994   4456999999999


Q ss_pred             ecCCCCC--Cccceeeccceecccc
Q psy14897         76 KNVPSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      .......  ......++..|.+||+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~y~aPE~  178 (269)
T 4hcu_A          154 RFVLDDQYTSSTGTKFPVKWASPEV  178 (269)
T ss_dssp             GGBCCHHHHSTTSTTCCGGGCCHHH
T ss_pred             ccccccccccccCcccccccCCHHH
Confidence            8654332  1122234556777774

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.64  E-value=3.7e-16  Score=97.57  Aligned_cols=90  Identities=19%  Similarity=0.285  Sum_probs=72.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEE
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLM   58 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~   58 (99)
                      .+..++||||+.+|+|.+++...                           .++.|++.++.|+|+++++|+|+++.|+++
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~  178 (313)
T 1t46_A           99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL  178 (313)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEE
Confidence            45789999999999999987532                           267899999999999999999999999999


Q ss_pred             eeCCCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         59 GLGKRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        59 ~~~~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      .   ....+++.|||.+.........   ....+|..|.+||+
T Consensus       179 ~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  218 (313)
T 1t46_A          179 T---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPES  218 (313)
T ss_dssp             E---TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHH
T ss_pred             c---CCCCEEEccccccccccccccceeccCCCCcceeeChHH
Confidence            5   5567999999999877554322   22345667888874

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.64  E-value=9.9e-16  Score=95.58  Aligned_cols=90  Identities=28%  Similarity=0.364  Sum_probs=72.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      .+..++||||+.+|+|.+.+...            .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||
T Consensus       102 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~Dfg  178 (307)
T 2nru_A          102 GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD---EAFTAKISDFG  178 (307)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCT
T ss_pred             CCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEc---CCCcEEEeecc
Confidence            45789999999999999887531            2789999999999999999999999999994   55679999999


Q ss_pred             ceecCCCCCC---ccceeeccceecccc
Q psy14897         74 LAKNVPSSPS---YERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~---~~~~~~t~~~~~~~~   98 (99)
                      .+........   .....+|..|.+||+
T Consensus       179 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~  206 (307)
T 2nru_A          179 LARASEKFAQTVMTSRIVGTTAYMAPEA  206 (307)
T ss_dssp             TCEECCSCSSCEECSSCCSCGGGCCHHH
T ss_pred             cccccccccccccccccCCCcCcCChHH
Confidence            9987654321   123467888888874

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.64  E-value=2.3e-16  Score=107.04  Aligned_cols=90  Identities=20%  Similarity=0.233  Sum_probs=68.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+|+|.+++...          .++.|++.|+.|||+++++|+|+++.|+++.   ....++++|||++
T Consensus       407 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~---~~~~vkL~DFGla  483 (613)
T 2ozo_A          407 AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLV---NRHYAKISDFGLS  483 (613)
T ss_dssp             SSSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCSTT
T ss_pred             cCCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEc---CCCcEEEeeccCc
Confidence            35689999999999999988532          2789999999999999999999999999995   4567999999999


Q ss_pred             ecCCCCCCcc----ceeeccceecccc
Q psy14897         76 KNVPSSPSYE----RHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~----~~~~t~~~~~~~~   98 (99)
                      +.+.......    ...++..|.+||+
T Consensus       484 ~~~~~~~~~~~~~~~~~~~~~y~APE~  510 (613)
T 2ozo_A          484 KALGADDSYYTARSAGKWPLKWYAPEC  510 (613)
T ss_dssp             TTCC--------------CCTTSCHHH
T ss_pred             ccccCCCceeeeccCCCCccceeCHhh
Confidence            8765432211    1123356777774

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.64  E-value=7.1e-16  Score=97.49  Aligned_cols=90  Identities=20%  Similarity=0.303  Sum_probs=71.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      .+..++||||+.+|+|.+++...                         .++.|++.++.|+|+++++|+|+++.|+++. 
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-  191 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-  191 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-
T ss_pred             CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEc-
Confidence            45789999999999999988542                         2678999999999999999999999999994 


Q ss_pred             CCCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         61 GKRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                        ....+++.|||++..+......   ....++..|.+||+
T Consensus       192 --~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  230 (334)
T 2pvf_A          192 --ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA  230 (334)
T ss_dssp             --TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHH
T ss_pred             --CCCCEEEccccccccccccccccccCCCCcccceeChHH
Confidence              5566999999999876544321   22234566788874

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.64  E-value=2.4e-16  Score=97.76  Aligned_cols=93  Identities=24%  Similarity=0.358  Sum_probs=74.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+.+...         .++.|++.++.|||+++++|+|+++.|+++........+++.|||.+.
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~  172 (287)
T 2wei_A           93 SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (287)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred             CCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence            35689999999999998877532         278999999999999999999999999999533334569999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ............++..|.+||+
T Consensus       173 ~~~~~~~~~~~~~~~~y~aPE~  194 (287)
T 2wei_A          173 CFQQNTKMKDRIGTAYYIAPEV  194 (287)
T ss_dssp             TBCCCSSCSCHHHHHTTCCHHH
T ss_pred             eecCCCccccccCcccccChHH
Confidence            7765544445567888888874

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.64  E-value=4.3e-16  Score=98.28  Aligned_cols=89  Identities=26%  Similarity=0.386  Sum_probs=66.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+ +|.+.+...          .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++
T Consensus        72 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a  147 (324)
T 3mtl_A           72 EKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN---ERGELKLADFGLA  147 (324)
T ss_dssp             SSCEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEEC---TTCCEEECSSSEE
T ss_pred             CCEEEEEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEEC---CCCCEEEccCccc
Confidence            4578999999985 887776532          2789999999999999999999999999994   4556999999999


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ....... .....++|..|.+||+
T Consensus       148 ~~~~~~~~~~~~~~~t~~y~aPE~  171 (324)
T 3mtl_A          148 RAKSIPTKTYDNEVVTLWYRPPDI  171 (324)
T ss_dssp             ECC------------CGGGCCHHH
T ss_pred             ccccCCccccccccCcccccChhh
Confidence            8664332 3344577888999884

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.64  E-value=2e-16  Score=100.50  Aligned_cols=88  Identities=19%  Similarity=0.322  Sum_probs=67.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||| +.+|+|.+++...         .++.|++.++.|||+++++|+|+++.|+++.    ...+++.|||+++
T Consensus        81 ~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~----~~~~kl~DFG~a~  155 (343)
T 3dbq_A           81 DQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIAN  155 (343)
T ss_dssp             SSEEEEEEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSC
T ss_pred             CCEEEEEEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE----CCcEEEeeccccc
Confidence            456899999 5677999888643         2789999999999999999999999999994    3569999999998


Q ss_pred             cCCCCCC---ccceeeccceecccc
Q psy14897         77 NVPSSPS---YERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~---~~~~~~t~~~~~~~~   98 (99)
                      .+.....   ....++|..|.+||+
T Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~  180 (343)
T 3dbq_A          156 QMQPDTTSVVKDSQVGTVNYMPPEA  180 (343)
T ss_dssp             CC------------CCCCSSCCHHH
T ss_pred             ccCcccccccCCCCcCCcCcCCHHH
Confidence            7654332   234578999999985

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.64  E-value=4.7e-16  Score=98.84  Aligned_cols=89  Identities=27%  Similarity=0.444  Sum_probs=72.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+ +|.+.+..+          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++
T Consensus        84 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg~a  159 (346)
T 1ua2_A           84 KSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD---ENGVLKLADFGLA  159 (346)
T ss_dssp             TTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECCCGGG
T ss_pred             CCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEc---CCCCEEEEecccc
Confidence            4578999999986 777776543          2789999999999999999999999999994   5567999999999


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +.+.... .....++|..|.+||+
T Consensus       160 ~~~~~~~~~~~~~~~t~~y~aPE~  183 (346)
T 1ua2_A          160 KSFGSPNRAYTHQVVTRWYRAPEL  183 (346)
T ss_dssp             STTTSCCCCCCCSCCCCTTCCHHH
T ss_pred             eeccCCcccCCcccccccccCchH
Confidence            8764332 3345678889999884

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.64  E-value=6.1e-16  Score=95.12  Aligned_cols=90  Identities=23%  Similarity=0.352  Sum_probs=72.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+.+...         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+.
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~  153 (276)
T 2yex_A           77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLAT  153 (276)
T ss_dssp             TTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred             CCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEc---cCCCEEEeeCCCcc
Confidence            35679999999999999988653         2789999999999999999999999999994   45669999999988


Q ss_pred             cCCCCC---Cccceeeccceecccc
Q psy14897         77 NVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                      .+....   ......++..|.+||+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~y~aPE~  178 (276)
T 2yex_A          154 VFRYNNRERLLNKMCGTLPYVAPEL  178 (276)
T ss_dssp             ECEETTEECCBCCCCSCGGGCCGGG
T ss_pred             ccCCCcchhcccCCccccCccChHH
Confidence            653321   1234467888888885

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.64  E-value=3.6e-16  Score=96.59  Aligned_cols=90  Identities=17%  Similarity=0.226  Sum_probs=70.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+|+|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~---~~~~~kl~Dfg~~  167 (283)
T 3gen_A           91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLS  167 (283)
T ss_dssp             SSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC---TTSCEEECSTTGG
T ss_pred             CCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEc---CCCCEEEcccccc
Confidence            45689999999999999988652          2789999999999999999999999999994   5556999999999


Q ss_pred             ecCCCCCC--ccceeeccceecccc
Q psy14897         76 KNVPSSPS--YERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~--~~~~~~t~~~~~~~~   98 (99)
                      ........  .....+|..|.+||+
T Consensus       168 ~~~~~~~~~~~~~~~~~~~y~aPE~  192 (283)
T 3gen_A          168 RYVLDDEYTSSVGSKFPVRWSPPEV  192 (283)
T ss_dssp             GGBCCHHHHSTTSTTSCGGGCCHHH
T ss_pred             ccccccccccccCCccCcccCCHHH
Confidence            86643211  112233456777764

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.64  E-value=2.7e-16  Score=100.84  Aligned_cols=88  Identities=25%  Similarity=0.314  Sum_probs=61.2

Q ss_pred             CCeEEEEEeeCCCCchhhhcc-------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST-------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~-------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      ...++||||+.+ +|.+.+..       ..++.|++.++.|||+++++|+|++++|+++.   ....+++.|||+++...
T Consensus       103 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~a~~~~  178 (371)
T 2xrw_A          103 QDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLARTAG  178 (371)
T ss_dssp             CEEEEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECCCCC-----
T ss_pred             cceEEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc---CCCCEEEEEeecccccc
Confidence            367999999985 67666642       23789999999999999999999999999994   55679999999998776


Q ss_pred             CCCCccceeeccceecccc
Q psy14897         80 SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        80 ~~~~~~~~~~t~~~~~~~~   98 (99)
                      ........++|..|.+||+
T Consensus       179 ~~~~~~~~~gt~~y~aPE~  197 (371)
T 2xrw_A          179 TSFMMTPYVVTRYYRAPEV  197 (371)
T ss_dssp             -----------CTTCCHHH
T ss_pred             cccccCCceecCCccCHHH
Confidence            5544455678899999985

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.63  E-value=3.1e-16  Score=107.08  Aligned_cols=90  Identities=18%  Similarity=0.250  Sum_probs=69.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+|+|.+++..+          .++.|++.|+.|||+++++|+|+++.|+++.   ....++++|||++
T Consensus       462 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~---~~~~vkL~DFG~a  538 (656)
T 2j0j_A          462 ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLS  538 (656)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCCCC
T ss_pred             cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEe---CCCCEEEEecCCC
Confidence            46789999999999999988643          2679999999999999999999999999995   4467999999999


Q ss_pred             ecCCCCCCc--cceeeccceecccc
Q psy14897         76 KNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      +........  ....++..|.+||+
T Consensus       539 ~~~~~~~~~~~~~~~~t~~y~aPE~  563 (656)
T 2j0j_A          539 RYMEDSTYYKASKGKLPIKWMAPES  563 (656)
T ss_dssp             CSCCC----------CCGGGCCHHH
T ss_pred             eecCCCcceeccCCCCCcceeCHHH
Confidence            876544322  22334567888874

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.63  E-value=9.7e-16  Score=94.50  Aligned_cols=90  Identities=20%  Similarity=0.250  Sum_probs=71.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++||||+.+++|.+++...           .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.
T Consensus        79 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~  155 (279)
T 1qpc_A           79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGL  155 (279)
T ss_dssp             SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTT
T ss_pred             CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEc---CCCCEEECCCcc
Confidence            45689999999999999988643           2689999999999999999999999999994   556699999999


Q ss_pred             eecCCCCCCc--cceeeccceecccc
Q psy14897         75 AKNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      +.........  ....++..|.+||+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~y~aPE~  181 (279)
T 1qpc_A          156 ARLIEDNEYTAREGAKFPIKWTAPEA  181 (279)
T ss_dssp             CEECSSSCEECCTTCCCCTTTSCHHH
T ss_pred             cccccCcccccccCCCCccCccChhh
Confidence            9876543211  22234556777774

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.63  E-value=4.6e-16  Score=96.24  Aligned_cols=89  Identities=26%  Similarity=0.359  Sum_probs=72.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+...         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+.
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~Dfg~~~  162 (284)
T 2vgo_A           86 RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG---YKGELKIADFGWSV  162 (284)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred             CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEc---CCCCEEEecccccc
Confidence            45689999999999999887642         2789999999999999999999999999994   45569999999987


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...... .....++..|.+||+
T Consensus       163 ~~~~~~-~~~~~~~~~y~aPE~  183 (284)
T 2vgo_A          163 HAPSLR-RRTMCGTLDYLPPEM  183 (284)
T ss_dssp             ECSSSC-BCCCCSCGGGCCHHH
T ss_pred             cCcccc-cccccCCCCcCCHHH
Confidence            654332 234567888888874

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.63  E-value=4.6e-16  Score=106.44  Aligned_cols=83  Identities=20%  Similarity=0.286  Sum_probs=67.7

Q ss_pred             eEEEEEeeCCCCchhhhcc-------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCC
Q psy14897          9 SCLVFPYSYGTKSGEQIST-------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS   81 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~l~~-------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~   81 (99)
                      .|+||||+.+++|.+.+..       ..++.|++.++.|+|+++++|+|+++.||++.   . ..+++.|||+++.....
T Consensus       159 ~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~---~-~~~kl~DFG~a~~~~~~  234 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT---E-EQLKLIDLGAVSRINSF  234 (681)
T ss_dssp             EEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---S-SCEEECCCTTCEETTCC
T ss_pred             eEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEe---C-CcEEEEecccchhcccC
Confidence            6999999999999887653       23789999999999999999999999999994   2 36899999999877544


Q ss_pred             CCccceeeccceecccc
Q psy14897         82 PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        82 ~~~~~~~~t~~~~~~~~   98 (99)
                         ...++|..|.+||+
T Consensus       235 ---~~~~gt~~y~aPE~  248 (681)
T 2pzi_A          235 ---GYLYGTPGFQAPEI  248 (681)
T ss_dssp             ---SCCCCCTTTSCTTH
T ss_pred             ---CccCCCccccCHHH
Confidence               34578999999985

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.63  E-value=1.5e-16  Score=108.28  Aligned_cols=90  Identities=19%  Similarity=0.238  Sum_probs=69.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+|+|.+++....         ++.|++.++.|||+++++|+|++++|+++.   ....++++|||+++
T Consensus       441 ~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~---~~~~~kL~DFGla~  517 (635)
T 4fl3_A          441 AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSK  517 (635)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCTTHHH
T ss_pred             cCCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEe---CCCCEEEEEcCCcc
Confidence            456889999999999999886432         789999999999999999999999999995   44579999999998


Q ss_pred             cCCCCCCc----cceeeccceecccc
Q psy14897         77 NVPSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      .+......    ....++..|.+||+
T Consensus       518 ~~~~~~~~~~~~~~~~~t~~y~APE~  543 (635)
T 4fl3_A          518 ALRADENYYKAQTHGKWPVKWYAPEC  543 (635)
T ss_dssp             HTTC-------------CGGGSCHHH
T ss_pred             ccccCccccccccCCCCceeeeChhh
Confidence            77544321    12234556778874

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.63  E-value=4.5e-16  Score=97.70  Aligned_cols=90  Identities=13%  Similarity=0.204  Sum_probs=71.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCe
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNL   66 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~   66 (99)
                      .+..++||||+.+|+|.+++...                   .++.|++.++.|+|+++++|+|+++.|+++.   ....
T Consensus       100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~---~~~~  176 (322)
T 1p4o_A          100 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFT  176 (322)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC---TTCC
T ss_pred             CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEc---CCCe
Confidence            45789999999999999988641                   1678999999999999999999999999994   5567


Q ss_pred             EEEeeccceecCCCCCC---ccceeeccceecccc
Q psy14897         67 VYIIDFGLAKNVPSSPS---YERHVTTQTTRIGRI   98 (99)
Q Consensus        67 ~~l~d~g~a~~~~~~~~---~~~~~~t~~~~~~~~   98 (99)
                      +++.|||+++.......   .....+|..|.+||+
T Consensus       177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  211 (322)
T 1p4o_A          177 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES  211 (322)
T ss_dssp             EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHH
T ss_pred             EEECcCccccccccccccccccCCCCCCCccChhh
Confidence            99999999886543321   122345667888874

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.63  E-value=3e-16  Score=96.86  Aligned_cols=89  Identities=28%  Similarity=0.382  Sum_probs=69.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+|+|.+.+...         .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++.
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~---~~~~~~l~Dfg~~~  157 (279)
T 3fdn_A           81 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV  157 (279)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEEC---TTSCEEECSCCEES
T ss_pred             CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEc---CCCCEEEEeccccc
Confidence            35689999999999998887542         3789999999999999999999999999994   55669999999886


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...... .....++..|.+||+
T Consensus       158 ~~~~~~-~~~~~~~~~y~aPE~  178 (279)
T 3fdn_A          158 HAPSSR-RTDLCGTLDYLPPEM  178 (279)
T ss_dssp             CC---------CCCCTTCCHHH
T ss_pred             cCCccc-ccccCCCCCccCHhH
Confidence            544332 234567888888874

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.63  E-value=6.4e-16  Score=96.36  Aligned_cols=90  Identities=28%  Similarity=0.401  Sum_probs=73.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +...++||||+.+++|.+++....        ++.|++.++.++|+.+++|+|+++.|+++.   ....+++.|||.+..
T Consensus        92 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~Dfg~~~~  168 (303)
T 3a7i_A           92 DTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQ  168 (303)
T ss_dssp             TTEEEEEEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEE
T ss_pred             CCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEEC---CCCCEEEeeccccee
Confidence            356899999999999999886532        789999999999999999999999999994   455699999999987


Q ss_pred             CCCCC-Cccceeeccceecccc
Q psy14897         78 VPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +.... ......++..|.+||+
T Consensus       169 ~~~~~~~~~~~~~~~~y~aPE~  190 (303)
T 3a7i_A          169 LTDTQIKRNTFVGTPFWMAPEV  190 (303)
T ss_dssp             CBTTBCCBCCCCSCGGGCCHHH
T ss_pred             cCccccccCccCCCcCccCHHH
Confidence            65432 2234567888888874

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.63  E-value=2.2e-16  Score=103.70  Aligned_cols=90  Identities=17%  Similarity=0.252  Sum_probs=66.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++||||+.+|+|.+++...           .++.|++.++.|||+++++|+|+++.|+++.   ....++++|||+
T Consensus       250 ~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DfG~  326 (452)
T 1fmk_A          250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGL  326 (452)
T ss_dssp             SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCCT
T ss_pred             CCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEC---CCCCEEECCCcc
Confidence            36789999999999999998642           2789999999999999999999999999994   445699999999


Q ss_pred             eecCCCCCC--ccceeeccceecccc
Q psy14897         75 AKNVPSSPS--YERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~--~~~~~~t~~~~~~~~   98 (99)
                      ++.+.....  .....++..|.+||.
T Consensus       327 a~~~~~~~~~~~~~~~~~~~y~aPE~  352 (452)
T 1fmk_A          327 ARLIEDNEYTARQGAKFPIKWTAPEA  352 (452)
T ss_dssp             TC--------------CCGGGSCHHH
T ss_pred             ceecCCCceecccCCcccccccCHhH
Confidence            987643321  112234556778774

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.63  E-value=8.1e-16  Score=97.39  Aligned_cols=89  Identities=20%  Similarity=0.314  Sum_probs=73.1

Q ss_pred             CCCeEEEEEeeCCCCchhh------hccc-----------hHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeE
Q psy14897          6 STQSCLVFPYSYGTKSGEQ------ISTG-----------KEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLV   67 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~------l~~~-----------~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~   67 (99)
                      .+..++||||+.+|+|.++      +...           .++.|++.++.|+|+ ++++|+|+++.|+++.   ....+
T Consensus       115 ~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~---~~~~~  191 (348)
T 2pml_X          115 YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD---KNGRV  191 (348)
T ss_dssp             SSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEEC---TTSCE
T ss_pred             CCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEc---CCCcE
Confidence            3578999999999999988      5431           278999999999999 9999999999999994   55679


Q ss_pred             EEeeccceecCCCCCCccceeeccceecccc
Q psy14897         68 YIIDFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        68 ~l~d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ++.|||.+...... ......++..|.+||+
T Consensus       192 kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~  221 (348)
T 2pml_X          192 KLSDFGESEYMVDK-KIKGSRGTYEFMPPEF  221 (348)
T ss_dssp             EECCCTTCEECBTT-EECSSCSCGGGCCGGG
T ss_pred             EEeccccccccccc-cccCCCCCcCccCchh
Confidence            99999999876443 2344567888888885

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.63  E-value=4e-16  Score=98.06  Aligned_cols=90  Identities=22%  Similarity=0.306  Sum_probs=67.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.+|+|.+++...           .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||+
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~---~~~~~kl~Dfg~  175 (326)
T 2x7f_A           99 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGV  175 (326)
T ss_dssp             CCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTCCEEECCCTT
T ss_pred             cceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEc---CCCCEEEeeCcC
Confidence            45789999999999999988642           2679999999999999999999999999994   556699999999


Q ss_pred             eecCCCCC-Cccceeeccceecccc
Q psy14897         75 AKNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +..+.... ......+|..|.+||+
T Consensus       176 ~~~~~~~~~~~~~~~~~~~y~aPE~  200 (326)
T 2x7f_A          176 SAQLDRTVGRRNTFIGTPYWMAPEV  200 (326)
T ss_dssp             TC-------------CCGGGCCHHH
T ss_pred             ceecCcCccccccccCCccccChhh
Confidence            88764332 2234467888888875

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.63  E-value=3e-16  Score=99.06  Aligned_cols=90  Identities=19%  Similarity=0.144  Sum_probs=70.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++|+||+.+|+|.+.+...          .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++
T Consensus        88 ~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a  164 (327)
T 3poz_A           88 TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLA  164 (327)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---ETTEEEECCTTHH
T ss_pred             cCCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEEC---CCCCEEEccCcce
Confidence            35678999999999999988652          2789999999999999999999999999995   4556999999999


Q ss_pred             ecCCCCCCc---cceeeccceecccc
Q psy14897         76 KNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      +.+......   ....+|..|.+||+
T Consensus       165 ~~~~~~~~~~~~~~~~~t~~y~aPE~  190 (327)
T 3poz_A          165 KLLGAEEKEYHAEGGKVPIKWMALES  190 (327)
T ss_dssp             HHHTTTCC-------CCCGGGSCHHH
T ss_pred             eEccCCcccccccCCCccccccChHH
Confidence            876543322   22234556788874

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.63  E-value=3.9e-16  Score=97.46  Aligned_cols=92  Identities=23%  Similarity=0.338  Sum_probs=73.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+.+...         .++.|++.++.|+|+++++|+|+++.|+++........+++.|||.+.
T Consensus        78 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~  157 (304)
T 2jam_A           78 TTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK  157 (304)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred             CCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence            35689999999999998887542         278999999999999999999999999998432345679999999987


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ..... .....++|..|.+||+
T Consensus       158 ~~~~~-~~~~~~~~~~y~aPE~  178 (304)
T 2jam_A          158 MEQNG-IMSTACGTPGYVAPEV  178 (304)
T ss_dssp             CCCCB-TTHHHHSCCCBCCTTT
T ss_pred             ecCCC-ccccccCCCCccChHH
Confidence            64432 2344567888999985

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.63  E-value=2.8e-16  Score=97.50  Aligned_cols=89  Identities=27%  Similarity=0.392  Sum_probs=67.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+ +|.+.+...          .++.|++.++.|+|+++++|+|++++|+++.   ....+++.|||++
T Consensus        72 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~  147 (288)
T 1ob3_A           72 KKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN---REGELKIADFGLA  147 (288)
T ss_dssp             SSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECCTTHH
T ss_pred             CCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEEeECccc
Confidence            4578999999986 787776532          2789999999999999999999999999994   5567999999999


Q ss_pred             ecCCCC-CCccceeeccceecccc
Q psy14897         76 KNVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      ...... .......+|..|.+||+
T Consensus       148 ~~~~~~~~~~~~~~~t~~y~aPE~  171 (288)
T 1ob3_A          148 RAFGIPVRKYTHEIVTLWYRAPDV  171 (288)
T ss_dssp             HHHCC---------CCCTTCCHHH
T ss_pred             cccCccccccccccccccccCchh
Confidence            876432 22344567888988884

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.63  E-value=4.3e-16  Score=96.25  Aligned_cols=90  Identities=18%  Similarity=0.208  Sum_probs=68.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+++|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        84 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~  160 (281)
T 3cc6_A           84 EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA---SPECVKLGDFGLS  160 (281)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE---ETTEEEECCCCGG
T ss_pred             CCCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEC---CCCcEEeCccCCC
Confidence            45679999999999999988542          2678999999999999999999999999995   4457999999999


Q ss_pred             ecCCCCCCc--cceeeccceecccc
Q psy14897         76 KNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      .........  ....++..|.+||+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~y~aPE~  185 (281)
T 3cc6_A          161 RYIEDEDYYKASVTRLPIKWMSPES  185 (281)
T ss_dssp             GCC---------CCCCCGGGCCHHH
T ss_pred             cccccccccccccCCCCcceeCchh
Confidence            876543321  22344566888874

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.62  E-value=8.1e-16  Score=100.69  Aligned_cols=92  Identities=20%  Similarity=0.235  Sum_probs=68.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCC--CCCeEEEeecc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGK--RGNLVYIIDFG   73 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~--~~~~~~l~d~g   73 (99)
                      ....++||||+. |+|.+++...          .++.|++.|+.|||+++++|+|++++|+++..+.  ....++++|||
T Consensus        90 ~~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG  168 (432)
T 3p23_A           90 RQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFG  168 (432)
T ss_dssp             TTEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTT
T ss_pred             CCEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEeccc
Confidence            345799999997 4888887542          3789999999999999999999999999994211  22357899999


Q ss_pred             ceecCCCCC----Cccceeeccceecccc
Q psy14897         74 LAKNVPSSP----SYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~----~~~~~~~t~~~~~~~~   98 (99)
                      +++.+....    .....++|..|.+||+
T Consensus       169 ~a~~~~~~~~~~~~~~~~~gt~~y~APE~  197 (432)
T 3p23_A          169 LCKKLAVGRHSFSRRSGVPGTEGWIAPEM  197 (432)
T ss_dssp             EEECC------------CCSCTTSCCGGG
T ss_pred             ceeeccCCCcceeeccccCCCcCccChhh
Confidence            998775432    2234578999999986

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.62  E-value=6.6e-16  Score=96.53  Aligned_cols=89  Identities=20%  Similarity=0.298  Sum_probs=71.5

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG   61 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~   61 (99)
                      ...++||||+.+|+|.+++...                         .++.|++.++.|+|+++++|+|+++.|+++.  
T Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~--  182 (316)
T 2xir_A          105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS--  182 (316)
T ss_dssp             SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC--
T ss_pred             CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC--
Confidence            4589999999999999987532                         2678999999999999999999999999994  


Q ss_pred             CCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         62 KRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        62 ~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                       ....+++.|||.++.+......   ....+|..|.+||+
T Consensus       183 -~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~  221 (316)
T 2xir_A          183 -EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET  221 (316)
T ss_dssp             -GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHH
T ss_pred             -CCCCEEECCCccccccccCccceeccCCCcceeecCchh
Confidence             4456999999999876544322   23456677888874

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.62  E-value=2.5e-16  Score=99.35  Aligned_cols=90  Identities=19%  Similarity=0.262  Sum_probs=71.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGK   62 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~   62 (99)
                      .+..++||||+.+|+|.+++...                       .++.|++.++.|+|+++++|+|+++.|+++.   
T Consensus       122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~---  198 (333)
T 2i1m_A          122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT---  198 (333)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE---
T ss_pred             CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC---
Confidence            45789999999999999988532                       2678999999999999999999999999995   


Q ss_pred             CCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         63 RGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        63 ~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      ....+++.|||++..+......   ....+|..|.+||+
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  237 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPES  237 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHH
T ss_pred             CCCeEEECccccccccccccceeecCCCCCCccccCHHH
Confidence            4567999999999866433221   22345667888874

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.62  E-value=1.2e-15  Score=96.46  Aligned_cols=90  Identities=20%  Similarity=0.339  Sum_probs=69.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC-------------
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG-------------   61 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~-------------   61 (99)
                      .+..++||||+ ++++.+.+...           .++.|++.++.|||+++++|+|+++.|+++...             
T Consensus        94 ~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~  172 (355)
T 2eu9_A           94 HGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCE  172 (355)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred             CCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccccc
Confidence            35689999999 55666665432           278999999999999999999999999998311             


Q ss_pred             ---CCCCeEEEeeccceecCCCCCCccceeeccceecccc
Q psy14897         62 ---KRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        62 ---~~~~~~~l~d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                         .....+++.|||++.......  ...++|..|.+||+
T Consensus       173 ~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~gt~~y~aPE~  210 (355)
T 2eu9_A          173 EKSVKNTSIRVADFGSATFDHEHH--TTIVATRHYRPPEV  210 (355)
T ss_dssp             EEEESCCCEEECCCTTCEETTSCC--CSSCSCGGGCCHHH
T ss_pred             ccccCCCcEEEeecCccccccccc--cCCcCCCcccCCee
Confidence               134568999999998754433  34578889999985

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.62  E-value=8e-16  Score=100.59  Aligned_cols=92  Identities=23%  Similarity=0.311  Sum_probs=68.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC--------
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG--------   61 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~--------   61 (99)
                      ++..++||||+. |+|.+.+...                .++.|++.|+.|||+++++|+|++|.|+++...        
T Consensus        81 ~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~  159 (434)
T 2rio_A           81 DRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQ  159 (434)
T ss_dssp             SSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCT
T ss_pred             CCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccc
Confidence            356899999996 5998887532                278999999999999999999999999999522        


Q ss_pred             --CCCCeEEEeeccceecCCCCCC-----ccceeeccceecccc
Q psy14897         62 --KRGNLVYIIDFGLAKNVPSSPS-----YERHVTTQTTRIGRI   98 (99)
Q Consensus        62 --~~~~~~~l~d~g~a~~~~~~~~-----~~~~~~t~~~~~~~~   98 (99)
                        .....++++|||++..+.....     ....++|..|.+||+
T Consensus       160 ~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~  203 (434)
T 2rio_A          160 TGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPEL  203 (434)
T ss_dssp             TCCCSCEEEECCCTTCEECCC--------------CCTTSCHHH
T ss_pred             cCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHH
Confidence              1234799999999988755432     123478889999984

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.62  E-value=5.8e-16  Score=95.09  Aligned_cols=92  Identities=22%  Similarity=0.355  Sum_probs=64.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCC---eeecCcCCCcEEEeeCC-----CCCeEEE
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRN---FIHRDIKPDNFLMGLGK-----RGNLVYI   69 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~---i~h~~l~~~~~l~~~~~-----~~~~~~l   69 (99)
                      ++..++||||+.+++|.+.+..+.        ++.|++.++.|+|+++   ++|+|+++.|+++....     ....+++
T Consensus        78 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl  157 (271)
T 3dtc_A           78 EPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKI  157 (271)
T ss_dssp             C--CEEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEE
T ss_pred             CCceEEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEE
Confidence            456899999999999999886433        7899999999999999   89999999999995211     1456999


Q ss_pred             eeccceecCCCCCCccceeeccceecccc
Q psy14897         70 IDFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        70 ~d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .|||.+........ ....+|..|.+||+
T Consensus       158 ~Dfg~~~~~~~~~~-~~~~~~~~y~aPE~  185 (271)
T 3dtc_A          158 TDFGLAREWHRTTK-MSAAGAYAWMAPEV  185 (271)
T ss_dssp             CCCCC--------------CCGGGSCHHH
T ss_pred             ccCCcccccccccc-cCCCCccceeCHHH
Confidence            99999987654432 34567888888874

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.62  E-value=5.4e-16  Score=97.38  Aligned_cols=89  Identities=25%  Similarity=0.340  Sum_probs=72.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ....++||||+. |+|.+++...           .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.
T Consensus        91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~---~~~~~kl~Dfg~  166 (326)
T 1blx_A           91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGL  166 (326)
T ss_dssp             EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECSCCS
T ss_pred             CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEc---CCCCEEEecCcc
Confidence            356899999998 5888887542           2789999999999999999999999999994   556799999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.............+|..|.+||+
T Consensus       167 ~~~~~~~~~~~~~~~~~~y~aPE~  190 (326)
T 1blx_A          167 ARIYSFQMALTSVVVTLWYRAPEV  190 (326)
T ss_dssp             CCCCCGGGGGCCCCCCCTTCCHHH
T ss_pred             cccccCCCCccccccccceeCHHH
Confidence            987654444445677888888874

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.62  E-value=4.9e-16  Score=100.60  Aligned_cols=92  Identities=25%  Similarity=0.292  Sum_probs=65.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc------------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC-CCCCe
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST------------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG-KRGNL   66 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~------------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~-~~~~~   66 (99)
                      +...++||||+.+ +|.+.+..                  ..++.|++.|+.|||+++++|+|+++.|+++... .....
T Consensus        92 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~  170 (405)
T 3rgf_A           92 DRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR  170 (405)
T ss_dssp             TTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTC
T ss_pred             CCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCc
Confidence            4568999999975 77666541                  2378999999999999999999999999999422 23457


Q ss_pred             EEEeeccceecCCCC----CCccceeeccceecccc
Q psy14897         67 VYIIDFGLAKNVPSS----PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        67 ~~l~d~g~a~~~~~~----~~~~~~~~t~~~~~~~~   98 (99)
                      ++++|||+++.+...    ......++|.+|.+||+
T Consensus       171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  206 (405)
T 3rgf_A          171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPEL  206 (405)
T ss_dssp             EEECCTTCCC----------------CCCTTCCHHH
T ss_pred             EEEEECCCceecCCCCcccccCCCceecCcccCchh
Confidence            999999999876432    22244578999999984

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.62  E-value=4.5e-16  Score=99.98  Aligned_cols=86  Identities=28%  Similarity=0.397  Sum_probs=57.9

Q ss_pred             CCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ...++||||+ +++|.+.++..        .++.|++.++.|||+.+++|+|+++.|+++.   ....+++.|||+++..
T Consensus       107 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~kL~DFG~a~~~  182 (367)
T 2fst_X          107 NDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT  182 (367)
T ss_dssp             CCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECC-------
T ss_pred             CeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEEC---CCCCEEEeeccccccc
Confidence            5679999999 67888877643        2789999999999999999999999999994   5567999999999876


Q ss_pred             CCCCCccceeeccceecccc
Q psy14897         79 PSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...  ....++|.+|.+||+
T Consensus       183 ~~~--~~~~~~t~~y~aPE~  200 (367)
T 2fst_X          183 ADE--MTGYVATRWYRAPEI  200 (367)
T ss_dssp             ----------CCCTTCCHHH
T ss_pred             ccc--CCCcCcCcCccChHH
Confidence            443  244678999999985

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.62  E-value=1.3e-15  Score=94.19  Aligned_cols=90  Identities=14%  Similarity=0.176  Sum_probs=70.3

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCC--eeecCcCCCcEEEeeCC--CCCeEEEeec
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRN--FIHRDIKPDNFLMGLGK--RGNLVYIIDF   72 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~--i~h~~l~~~~~l~~~~~--~~~~~~l~d~   72 (99)
                      +..++||||+.+|+|.+.+..+          .++.|++.++.|+|+++  ++|+|+++.|+++....  ....+++.||
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df  173 (287)
T 4f0f_A           94 NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF  173 (287)
T ss_dssp             TTTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred             CCCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence            3458999999999998877432          27899999999999999  99999999999994211  1123899999


Q ss_pred             cceecCCCCCCccceeeccceecccc
Q psy14897         73 GLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |.++.....  .....+|..|.+||+
T Consensus       174 g~~~~~~~~--~~~~~g~~~y~aPE~  197 (287)
T 4f0f_A          174 GLSQQSVHS--VSGLLGNFQWMAPET  197 (287)
T ss_dssp             TTCBCCSSC--EECCCCCCTTSCGGG
T ss_pred             Ccccccccc--ccccCCCccccCchh
Confidence            999855432  344678888999985

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.62  E-value=5.9e-16  Score=95.78  Aligned_cols=90  Identities=18%  Similarity=0.258  Sum_probs=71.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+.+++|.+++...           .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.
T Consensus        81 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~~l~Dfg~  157 (288)
T 3kfa_A           81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGL  157 (288)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEEC---GGGCEEECCCCG
T ss_pred             CCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEc---CCCCEEEccCcc
Confidence            45689999999999999988641           2678999999999999999999999999994   445699999999


Q ss_pred             eecCCCCCCc--cceeeccceecccc
Q psy14897         75 AKNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      +.........  ....++..|.+||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~aPE~  183 (288)
T 3kfa_A          158 SRLMTGDTYTAHAGAKFPIKWTAPES  183 (288)
T ss_dssp             GGTSCSSSSEEETTEEECGGGCCHHH
T ss_pred             ceeccCCccccccCCccccCcCChhh
Confidence            9876544321  22345566888874

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.62  E-value=5.7e-16  Score=98.85  Aligned_cols=86  Identities=26%  Similarity=0.400  Sum_probs=70.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+. |++.+.+..          ..++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++
T Consensus       126 ~~~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a  201 (348)
T 1u5q_A          126 EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSA  201 (348)
T ss_dssp             TTEEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---TTTEEEECCCTTC
T ss_pred             CCeEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEeeccCc
Confidence            456899999998 577666642          12789999999999999999999999999995   5567999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.....   ...++|..|.+||+
T Consensus       202 ~~~~~~---~~~~gt~~y~aPE~  221 (348)
T 1u5q_A          202 SIMAPA---NSFVGTPYWMAPEV  221 (348)
T ss_dssp             BSSSSB---CCCCSCGGGCCHHH
T ss_pred             eecCCC---CcccCCcceeCHhh
Confidence            876543   33578888999884

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.62  E-value=3.1e-16  Score=97.03  Aligned_cols=89  Identities=18%  Similarity=0.253  Sum_probs=62.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhC-CeeecCcCCCcEEEeeCCCCCeEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSR-NFIHRDIKPDNFLMGLGKRGNLVYIID   71 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~-~i~h~~l~~~~~l~~~~~~~~~~~l~d   71 (99)
                      ++..++||||+++ +|.+.+..             ..++.|++.++.|+|++ +++|+|+++.|+++.   ....+++.|
T Consensus        78 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~---~~~~~kl~D  153 (290)
T 3fme_A           78 EGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN---ALGQVKMCD  153 (290)
T ss_dssp             SSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEEC---TTCCEEBCC
T ss_pred             cCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---CCCCEEEee
Confidence            4578999999985 77666542             12789999999999998 999999999999994   456799999


Q ss_pred             ccceecCCCCCCccceeeccceecccc
Q psy14897         72 FGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        72 ~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ||.+.............+|..|.+||+
T Consensus       154 fg~~~~~~~~~~~~~~~~t~~y~aPE~  180 (290)
T 3fme_A          154 FGISGYLVDDVAKDIDAGCKPYMAPER  180 (290)
T ss_dssp             C---------------CCCCCCSCHHH
T ss_pred             cCCcccccccccccccCCCccccChhh
Confidence            999987766555455578888999885

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.62  E-value=8.6e-16  Score=100.38  Aligned_cols=89  Identities=21%  Similarity=0.304  Sum_probs=70.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+. ++|.+.+...           .++.|++.++.|||+++++|+|++++|+++..+ ....++++|||+
T Consensus       171 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~-~~~~vkL~DFG~  248 (429)
T 3kvw_A          171 RNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ-GRSGIKVIDFGS  248 (429)
T ss_dssp             TTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESST-TSCCEEECCCTT
T ss_pred             CCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccC-CCcceEEeeccc
Confidence            356899999997 5888877542           278999999999999999999999999999511 112389999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.......  ...++|..|.+||+
T Consensus       249 a~~~~~~~--~~~~gt~~y~aPE~  270 (429)
T 3kvw_A          249 SCYEHQRV--YTYIQSRFYRAPEV  270 (429)
T ss_dssp             CEETTCCC--CSSCSCGGGCCHHH
T ss_pred             ceecCCcc--cccCCCCCccChHH
Confidence            97654432  34578889999985

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.62  E-value=8e-16  Score=97.41  Aligned_cols=90  Identities=16%  Similarity=0.234  Sum_probs=65.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+|+|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus       118 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~~  194 (333)
T 1mqb_A          118 YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN---SNLVCKVSDFGLS  194 (333)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCCCC-
T ss_pred             CCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEEC---CCCcEEECCCCcc
Confidence            45789999999999999988643          2789999999999999999999999999994   5567999999999


Q ss_pred             ecCCCCCCc----cceeeccceecccc
Q psy14897         76 KNVPSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      +.+......    ....++..|.+||+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~  221 (333)
T 1mqb_A          195 RVLEDDPEATYTTSGGKIPIRWTAPEA  221 (333)
T ss_dssp             ----------------CCCGGGSCHHH
T ss_pred             hhhccccccccccCCCCccccccCchh
Confidence            876543211    11233556777774

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.62  E-value=1.1e-15  Score=96.41  Aligned_cols=89  Identities=24%  Similarity=0.317  Sum_probs=70.3

Q ss_pred             CCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++||||+.+++|.+++....          ++.|++.++.+||+++++|+|+++.|+++.   ....+++.|||.+.
T Consensus       117 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~---~~~~~kL~Dfg~~~  193 (326)
T 2w1i_A          117 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGLTK  193 (326)
T ss_dssp             -CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE---ETTEEEECCCTTCE
T ss_pred             CceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEc---CCCcEEEecCcchh
Confidence            36899999999999999886432          679999999999999999999999999995   45679999999998


Q ss_pred             cCCCCCCc----cceeeccceecccc
Q psy14897         77 NVPSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      ........    ....++..|.+||+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~y~aPE~  219 (326)
T 2w1i_A          194 VLPQDKEYYKVKEPGESPIFWYAPES  219 (326)
T ss_dssp             ECCSSCSEEECSSCCSCCGGGCCHHH
T ss_pred             hccccccccccccCCCCceeEECchh
Confidence            87554321    12234555777774

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.61  E-value=1.2e-15  Score=94.51  Aligned_cols=90  Identities=21%  Similarity=0.253  Sum_probs=71.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+++|.+++...          .++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+
T Consensus        81 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~Dfg~~  157 (287)
T 1u59_A           81 AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLS  157 (287)
T ss_dssp             SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---ETTEEEECCCTTC
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEc---CCCCEEECcccce
Confidence            45689999999999999988532          2789999999999999999999999999995   4557999999999


Q ss_pred             ecCCCCCCc----cceeeccceecccc
Q psy14897         76 KNVPSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      ..+......    ....+|..|.+||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~  184 (287)
T 1u59_A          158 KALGADDSYYTARSAGKWPLKWYAPEC  184 (287)
T ss_dssp             EECTTCSCEECCCCSSCCCGGGCCHHH
T ss_pred             eeeccCcceeeccccccccccccCHHH
Confidence            877544322    12234566788874

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.61  E-value=8.1e-16  Score=96.41  Aligned_cols=90  Identities=21%  Similarity=0.300  Sum_probs=66.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+.+++|.+++...         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+.
T Consensus       106 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~---~~~~~kl~Dfg~~~  182 (309)
T 2h34_A          106 DGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS---ADDFAYLVDFGIAS  182 (309)
T ss_dssp             TTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECSCCC--
T ss_pred             CCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEc---CCCCEEEecCccCc
Confidence            35689999999999999988643         2789999999999999999999999999994   45679999999987


Q ss_pred             cCCCCC--Cccceeeccceecccc
Q psy14897         77 NVPSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      ......  ......++..|.+||+
T Consensus       183 ~~~~~~~~~~~~~~~~~~y~aPE~  206 (309)
T 2h34_A          183 ATTDEKLTQLGNTVGTLYYMAPER  206 (309)
T ss_dssp             --------------CCGGGCCGGG
T ss_pred             cccccccccccccCCCcCccCHHH
Confidence            764432  2234467888888885

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.61  E-value=1.1e-15  Score=94.83  Aligned_cols=90  Identities=19%  Similarity=0.223  Sum_probs=70.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.+++|.+++..+         .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++.
T Consensus        89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~  165 (291)
T 1xbb_A           89 AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSK  165 (291)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCCTTCE
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEe---CCCcEEEccCCcce
Confidence            45789999999999999988643         2789999999999999999999999999995   44579999999998


Q ss_pred             cCCCCCCcc----ceeeccceecccc
Q psy14897         77 NVPSSPSYE----RHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~----~~~~t~~~~~~~~   98 (99)
                      .+.......    ...++..|.+||+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~y~aPE~  191 (291)
T 1xbb_A          166 ALRADENYYKAQTHGKWPVKWYAPEC  191 (291)
T ss_dssp             ECCTTCSEEEC----CCCGGGCCHHH
T ss_pred             eeccCCCcccccccCCCCceeeChHH
Confidence            775543321    1223455777764

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.61  E-value=1.3e-15  Score=95.22  Aligned_cols=89  Identities=27%  Similarity=0.402  Sum_probs=69.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ...++||||+. |+|.+.+....        ++.|++.++.|||+++++|+|+++.|+++.  .....+++.|||.++..
T Consensus        95 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--~~~~~~kl~Dfg~~~~~  171 (320)
T 2i6l_A           95 NSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN--TEDLVLKIGDFGLARIM  171 (320)
T ss_dssp             SEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE--TTTTEEEECCCTTCBCC
T ss_pred             CceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc--CCCCeEEEccCcccccc
Confidence            56899999998 58988876532        789999999999999999999999999995  34567999999999876


Q ss_pred             CCCC----Cccceeeccceecccc
Q psy14897         79 PSSP----SYERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~----~~~~~~~t~~~~~~~~   98 (99)
                      ....    ......++.+|.+||+
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~  195 (320)
T 2i6l_A          172 DPHYSHKGHLSEGLVTKWYRSPRL  195 (320)
T ss_dssp             --------CCCGGGSCCTTCCHHH
T ss_pred             CCCcccccccccccccccccCcHH
Confidence            4321    2233456777888874

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.61  E-value=1.3e-15  Score=94.43  Aligned_cols=91  Identities=21%  Similarity=0.293  Sum_probs=71.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      .+..++||||+.+++|.+++...            .++.|++.++.|+|+++++|+|+++.|+++.  .....+++.|||
T Consensus        91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~--~~~~~~kl~Dfg  168 (295)
T 2clq_A           91 NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLIN--TYSGVLKISDFG  168 (295)
T ss_dssp             TTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTCCEEECCTT
T ss_pred             CCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEE--CCCCCEEEeecc
Confidence            35689999999999999987643            1578999999999999999999999999995  325679999999


Q ss_pred             ceecCCCCC-Cccceeeccceecccc
Q psy14897         74 LAKNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      .+....... ......++..|.+||+
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~y~aPE~  194 (295)
T 2clq_A          169 TSKRLAGINPCTETFTGTLQYMAPEI  194 (295)
T ss_dssp             TCEESCC-----CCCCCCGGGCCHHH
T ss_pred             cccccCCCCCcccccCCCccccChhh
Confidence            998765432 2234467888888874

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.61  E-value=1.1e-15  Score=97.62  Aligned_cols=88  Identities=27%  Similarity=0.331  Sum_probs=71.4

Q ss_pred             CCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ...++||||+.+ +|.+.++...        ++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||.+...
T Consensus       103 ~~~~iv~e~~~~-~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a~~~  178 (364)
T 3qyz_A          103 KDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLARVA  178 (364)
T ss_dssp             CCEEEEEECCSE-EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEEC
T ss_pred             ceEEEEEcccCc-CHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEEC---CCCCEEEEeCcceEec
Confidence            468999999985 8888776432        789999999999999999999999999994   5566999999999876


Q ss_pred             CCCCC----ccceeeccceecccc
Q psy14897         79 PSSPS----YERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~~----~~~~~~t~~~~~~~~   98 (99)
                      .....    ....++|.+|.+||+
T Consensus       179 ~~~~~~~~~~~~~~gt~~y~aPE~  202 (364)
T 3qyz_A          179 DPDHDHTGFLTEYVATRWYRAPEI  202 (364)
T ss_dssp             CGGGCBCCTTCCCCSCGGGCCHHH
T ss_pred             CCCCCccccccccccccCCCCCHH
Confidence            53321    234478899999984

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.61  E-value=1e-15  Score=96.14  Aligned_cols=87  Identities=21%  Similarity=0.324  Sum_probs=61.7

Q ss_pred             eEEEEEeeCCCCchhhhccc---------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          9 SCLVFPYSYGTKSGEQISTG---------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~l~~~---------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      .++||||+.+|+|.+++...               .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||
T Consensus       106 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~---~~~~~kl~Dfg  182 (323)
T 3qup_A          106 PMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLA---EDMTVCVADFG  182 (323)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTSCEEECCCC
T ss_pred             cEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEc---CCCCEEEeecc
Confidence            38999999999999887431               2789999999999999999999999999994   55679999999


Q ss_pred             ceecCCCCCCcc---ceeeccceecccc
Q psy14897         74 LAKNVPSSPSYE---RHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~~~---~~~~t~~~~~~~~   98 (99)
                      .++.........   ...++..|.+||.
T Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~  210 (323)
T 3qup_A          183 LSRKIYSGDYYRQGCASKLPVKWLALES  210 (323)
T ss_dssp             C-----------------CCGGGCCHHH
T ss_pred             ccccccccccccccccccCcccccCchh
Confidence            998764433221   2233456777764

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.61  E-value=4.3e-16  Score=98.47  Aligned_cols=92  Identities=25%  Similarity=0.420  Sum_probs=66.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC--CCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG--KRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~--~~~~~~~l~d~g~   74 (99)
                      ++..++||||+.+ +|.+++...         .++.|++.++.|||+++++|+|++++|+++..+  .....+++.|||+
T Consensus       105 ~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~  183 (329)
T 3gbz_A          105 NHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL  183 (329)
T ss_dssp             TTEEEEEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred             CCEEEEEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence            3568999999985 888887643         278999999999999999999999999999522  1234589999999


Q ss_pred             eecCCCC-CCccceeeccceecccc
Q psy14897         75 AKNVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      +..+... ......++|..|.+||+
T Consensus       184 a~~~~~~~~~~~~~~~t~~y~aPE~  208 (329)
T 3gbz_A          184 ARAFGIPIRQFTHEIITLWYRPPEI  208 (329)
T ss_dssp             HHHHC-----------CCTTCCHHH
T ss_pred             ccccCCcccccCCCcCCccccCHHH
Confidence            9876433 23344567888999884

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.61  E-value=1.9e-15  Score=95.21  Aligned_cols=90  Identities=18%  Similarity=0.180  Sum_probs=73.3

Q ss_pred             CCCeEEEEEeeCC-CCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYG-TKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~-g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+ ++|.+++..+         .++.|++.++.|+|+++++|+|+++.|+++.  .....+++.|||++
T Consensus       120 ~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~--~~~~~~kL~Dfg~~  197 (320)
T 3a99_A          120 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDFGSG  197 (320)
T ss_dssp             SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTTEEEECCCTTC
T ss_pred             CCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEe--CCCCCEEEeeCccc
Confidence            3568999999986 7898887642         2789999999999999999999999999995  34567999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.+.... .....+|..|.+||+
T Consensus       198 ~~~~~~~-~~~~~gt~~y~aPE~  219 (320)
T 3a99_A          198 ALLKDTV-YTDFDGTRVYSPPEW  219 (320)
T ss_dssp             EECCSSC-BCCCCSCGGGSCHHH
T ss_pred             ccccccc-ccCCCCCccCCChHH
Confidence            8775432 344568888998884

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.61  E-value=6.6e-16  Score=95.28  Aligned_cols=87  Identities=21%  Similarity=0.308  Sum_probs=64.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +..++||||+.+|+|.+++...           .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~  164 (278)
T 1byg_A           88 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLT  164 (278)
T ss_dssp             -CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTSCEEECCCCC-
T ss_pred             CceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEe---CCCcEEEeecccc
Confidence            4689999999999999988642           2678999999999999999999999999994   4567999999998


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .......  ....++..|.+||+
T Consensus       165 ~~~~~~~--~~~~~~~~y~aPE~  185 (278)
T 1byg_A          165 KEASSTQ--DTGKLPVKWTAPEA  185 (278)
T ss_dssp             -------------CCTTTSCHHH
T ss_pred             ccccccc--cCCCccccccCHHH
Confidence            8654332  22345667888874

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.61  E-value=1.6e-15  Score=94.89  Aligned_cols=90  Identities=21%  Similarity=0.287  Sum_probs=72.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+++|.+++..          ..++.|++.++.|+|+.+++|+|+++.|+++.   ....+++.|||.+
T Consensus        96 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~  172 (314)
T 3com_A           96 NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN---TEGHAKLADFGVA  172 (314)
T ss_dssp             TTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTC
T ss_pred             CCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEEC---CCCCEEEeecccc
Confidence            3568999999999999998852          12789999999999999999999999999994   4566999999999


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ..+.... ......++..|.+||+
T Consensus       173 ~~~~~~~~~~~~~~~~~~y~aPE~  196 (314)
T 3com_A          173 GQLTDTMAKRNTVIGTPFWMAPEV  196 (314)
T ss_dssp             EECBTTBSCBCCCCSCGGGCCHHH
T ss_pred             hhhhhhccccCccCCCCCccChhh
Confidence            8765432 2234467888888874

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.60  E-value=7.6e-16  Score=97.26  Aligned_cols=90  Identities=31%  Similarity=0.452  Sum_probs=67.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc---------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST---------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~---------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||||+.++++...+..         ..++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+.
T Consensus        96 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~  172 (331)
T 4aaa_A           96 KKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFAR  172 (331)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCTTC-
T ss_pred             CCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEc---CCCcEEEEeCCCce
Confidence            3568999999999888876542         23789999999999999999999999999994   55579999999998


Q ss_pred             cCCCCC-Cccceeeccceecccc
Q psy14897         77 NVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      .+.... ......+|..|.+||+
T Consensus       173 ~~~~~~~~~~~~~~t~~y~aPE~  195 (331)
T 4aaa_A          173 TLAAPGEVYDDEVATRWYRAPEL  195 (331)
T ss_dssp             -----------CCCCCTTCCHHH
T ss_pred             eecCCccccCCCcCCccccCccc
Confidence            764432 2344567888888874

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.60  E-value=2.9e-16  Score=105.04  Aligned_cols=90  Identities=17%  Similarity=0.252  Sum_probs=69.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++||||+.+|+|.+++...           .++.|++.++.|||+++++|+|+++.|+++.   ....++++|||+
T Consensus       333 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~  409 (535)
T 2h8h_A          333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGL  409 (535)
T ss_dssp             SSSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCTTS
T ss_pred             eccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEc---CCCcEEEccccc
Confidence            36789999999999999998642           2789999999999999999999999999994   445699999999


Q ss_pred             eecCCCCCC--ccceeeccceecccc
Q psy14897         75 AKNVPSSPS--YERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~--~~~~~~t~~~~~~~~   98 (99)
                      ++.+.....  .....++..|.+||+
T Consensus       410 a~~~~~~~~~~~~~~~~~~~y~aPE~  435 (535)
T 2h8h_A          410 ARLIEDNEYTARQGAKFPIKWTAPEA  435 (535)
T ss_dssp             TTTCCCHHHHTTCSTTSCGGGSCHHH
T ss_pred             ceecCCCceecccCCcCcccccCHHH
Confidence            986643211  111233456777763

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.60  E-value=2e-15  Score=93.42  Aligned_cols=89  Identities=21%  Similarity=0.284  Sum_probs=69.4

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...++||||+.+|+|.+.+...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+.
T Consensus        93 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~---~~~~~kl~Dfg~~~  169 (291)
T 1u46_A           93 PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMR  169 (291)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE---ETTEEEECCCTTCE
T ss_pred             CCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEc---CCCCEEEccccccc
Confidence            4589999999999999988643          2789999999999999999999999999995   44579999999998


Q ss_pred             cCCCCCCc----cceeeccceecccc
Q psy14897         77 NVPSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      .+......    ....++..|.+||+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~y~aPE~  195 (291)
T 1u46_A          170 ALPQNDDHYVMQEHRKVPFAWCAPES  195 (291)
T ss_dssp             ECCC-CCEEEC-----CCGGGCCHHH
T ss_pred             cccccccchhhhccCCCCceeeCchh
Confidence            87544321    12344556888874

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.60  E-value=2.5e-16  Score=100.33  Aligned_cols=89  Identities=19%  Similarity=0.306  Sum_probs=70.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhC-CeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSR-NFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~-~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+|+|.+++...         .++.|++.++.|+|+. +++|+|+++.|+++.   ....+++.|||++
T Consensus       103 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~  179 (360)
T 3eqc_A          103 DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVS  179 (360)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC---TTCCEEECCCCCC
T ss_pred             CCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEEC---CCCCEEEEECCCC
Confidence            45689999999999999988653         3789999999999986 999999999999994   4566999999998


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ..+.... .....+|..|.+||+
T Consensus       180 ~~~~~~~-~~~~~gt~~y~aPE~  201 (360)
T 3eqc_A          180 GQLIDSM-ANSFVGTRSYMSPER  201 (360)
T ss_dssp             HHHHHHC-----CCCCTTCCHHH
T ss_pred             ccccccc-ccCCCCCCCeECHHH
Confidence            7553221 233567888888874

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.60  E-value=1.3e-15  Score=97.64  Aligned_cols=90  Identities=29%  Similarity=0.446  Sum_probs=68.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhC-CeeecCcCCCcEEEeeCC-----------
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSR-NFIHRDIKPDNFLMGLGK-----------   62 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~-~i~h~~l~~~~~l~~~~~-----------   62 (99)
                      ....++||||+ ++++.+.+...           .++.|++.++.|||++ +++|+|+++.|+++..+.           
T Consensus       117 ~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~  195 (397)
T 1wak_A          117 GTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEAT  195 (397)
T ss_dssp             EEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC
T ss_pred             CceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhH
Confidence            34689999999 45665554321           2789999999999998 999999999999995211           


Q ss_pred             -----------------------------------CCCeEEEeeccceecCCCCCCccceeeccceecccc
Q psy14897         63 -----------------------------------RGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        63 -----------------------------------~~~~~~l~d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                                                         ....+++.|||.+......  ....++|..|.+||+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aPE~  264 (397)
T 1wak_A          196 EWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEV  264 (397)
T ss_dssp             ---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCHHH
T ss_pred             HHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccCChh
Confidence                                               0126999999999876543  244578999999985

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.60  E-value=2.1e-15  Score=95.89  Aligned_cols=87  Identities=26%  Similarity=0.297  Sum_probs=69.5

Q ss_pred             eEEEEEeeCCCCchhhhc----c---------chHHHHHHHHHHHHh--hCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          9 SCLVFPYSYGTKSGEQIS----T---------GKEDREWIGRIDYIH--SRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~l~----~---------~~~~~~i~~~l~~lh--~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      .++||||+.++ +...+.    .         ..++.|++.++.|+|  +++++|+|+++.|+++.  .....+++.|||
T Consensus       101 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~--~~~~~~kl~Dfg  177 (360)
T 3e3p_A          101 LNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVN--EADGTLKLCDFG  177 (360)
T ss_dssp             EEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEE--TTTTEEEECCCT
T ss_pred             EEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEe--CCCCcEEEeeCC
Confidence            78999999974 433322    1         227899999999999  99999999999999995  335679999999


Q ss_pred             ceecCCCCCCccceeeccceecccc
Q psy14897         74 LAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ++..+..........+|..|.+||+
T Consensus       178 ~a~~~~~~~~~~~~~gt~~y~aPE~  202 (360)
T 3e3p_A          178 SAKKLSPSEPNVAYICSRYYRAPEL  202 (360)
T ss_dssp             TCBCCCTTSCCCSTTSCGGGCCHHH
T ss_pred             CceecCCCCCcccccCCcceeCHHH
Confidence            9998776655556678888999884

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.59  E-value=1.4e-15  Score=96.11  Aligned_cols=90  Identities=19%  Similarity=0.144  Sum_probs=64.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ....++|+||+.+|+|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++
T Consensus        88 ~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kL~DfG~a  164 (327)
T 3lzb_A           88 TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLA  164 (327)
T ss_dssp             SSSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---ETTEEEECCTTC-
T ss_pred             cCCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEc---CCCCEEEccCcce
Confidence            35688999999999999988642          2789999999999999999999999999995   4556999999999


Q ss_pred             ecCCCCCCc---cceeeccceecccc
Q psy14897         76 KNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      ..+......   ....+|..|.+||+
T Consensus       165 ~~~~~~~~~~~~~~~~~t~~y~aPE~  190 (327)
T 3lzb_A          165 KLLGAEEKEYHAEGGKVPIKWMALES  190 (327)
T ss_dssp             ---------------CCCGGGSCHHH
T ss_pred             eEccCccccccccCCCccccccCHHH
Confidence            876443322   22234556778774

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.59  E-value=8e-16  Score=96.93  Aligned_cols=93  Identities=19%  Similarity=0.243  Sum_probs=71.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEE
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYI   69 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l   69 (99)
                      .+..++||||+.+|+|.+++...                .++.|++.++.|||+++++|+|+++.|+++..+.....+++
T Consensus       105 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl  184 (327)
T 2yfx_A          105 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKI  184 (327)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEE
Confidence            45689999999999999988643                26799999999999999999999999999953334556999


Q ss_pred             eeccceecCCCCC---Cccceeeccceecccc
Q psy14897         70 IDFGLAKNVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        70 ~d~g~a~~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                      .|||++.......   ......++..|.+||+
T Consensus       185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  216 (327)
T 2yfx_A          185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEA  216 (327)
T ss_dssp             CCCHHHHHHHC------CCGGGSCGGGCCHHH
T ss_pred             CccccccccccccccccCCCcCCCcceeCHhH
Confidence            9999987543222   1122345677888874

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.59  E-value=2e-15  Score=94.12  Aligned_cols=71  Identities=14%  Similarity=0.185  Sum_probs=60.9

Q ss_pred             CCCCeEEEEEeeCCCCchhhhcc---chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCC
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQIST---GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS   80 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~---~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~   80 (99)
                      ..+..++||||+++|+|.+ +..   ..++.|++.++.++|+.+++|+|++|.|+++.    ...++++|||+++....
T Consensus       171 ~~~~~~lvmE~~~g~~L~~-l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~----~~~vkl~DFG~a~~~~~  244 (282)
T 1zar_A          171 AWEGNAVLMELIDAKELYR-VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS----EEGIWIIDFPQSVEVGE  244 (282)
T ss_dssp             EEETTEEEEECCCCEEGGG-CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE----TTEEEECCCTTCEETTS
T ss_pred             eccceEEEEEecCCCcHHH-cchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE----CCcEEEEECCCCeECCC
Confidence            3456799999999999998 532   24889999999999999999999999999994    56799999999987643

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.59  E-value=1.6e-15  Score=94.99  Aligned_cols=89  Identities=18%  Similarity=0.255  Sum_probs=67.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+++|.+++....          ++.|++.++.|+|+++++|+|+++.|+++.    ...+++.|||++
T Consensus       101 ~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~----~~~~~l~Dfg~~  176 (319)
T 2y4i_B          101 PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD----NGKVVITDFGLF  176 (319)
T ss_dssp             SSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC------CCEECCCSCC
T ss_pred             CCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe----CCCEEEeecCCc
Confidence            356899999999999999886532          789999999999999999999999999994    346899999987


Q ss_pred             ecCCCC------CCccceeeccceecccc
Q psy14897         76 KNVPSS------PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~------~~~~~~~~t~~~~~~~~   98 (99)
                      ......      .......++..|.+||+
T Consensus       177 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~  205 (319)
T 2y4i_B          177 SISGVLQAGRREDKLRIQNGWLCHLAPEI  205 (319)
T ss_dssp             C----------CCSCBCCSGGGGTSCHHH
T ss_pred             cccccccccccccccccCCCcccccChHH
Confidence            654211      12233456777888874

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.59  E-value=3.9e-15  Score=92.37  Aligned_cols=88  Identities=17%  Similarity=0.263  Sum_probs=68.7

Q ss_pred             CeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ..++||||+.+|+|.+.+...          .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||.++.
T Consensus        97 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~---~~~~~kl~Dfg~~~~  173 (298)
T 3pls_A           97 LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLD---ESFTVKVADFGLARD  173 (298)
T ss_dssp             CCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTCCEEECCTTSSCT
T ss_pred             CcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCcEEeCcCCCccc
Confidence            348999999999999988642          2778999999999999999999999999994   555799999999986


Q ss_pred             CCCCC-----Cccceeeccceecccc
Q psy14897         78 VPSSP-----SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~-----~~~~~~~t~~~~~~~~   98 (99)
                      +....     ......++..|.+||.
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~y~aPE~  199 (298)
T 3pls_A          174 ILDREYYSVQQHRHARLPVKWTALES  199 (298)
T ss_dssp             TTTGGGGCSCCSSCTTCGGGGSCHHH
T ss_pred             ccCCcccccccCcCCCCCccccChhh
Confidence            54321     1122345666777763

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.59  E-value=1.1e-15  Score=93.50  Aligned_cols=90  Identities=19%  Similarity=0.259  Sum_probs=70.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+++|.+++...          .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        75 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~---~~~~~kl~dfg~~  151 (267)
T 3t9t_A           75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMT  151 (267)
T ss_dssp             SSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---GGGCEEECCTTGG
T ss_pred             CCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEC---CCCCEEEcccccc
Confidence            45789999999999999988643          2779999999999999999999999999994   4456999999998


Q ss_pred             ecCCCCC--Cccceeeccceecccc
Q psy14897         76 KNVPSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      .......  ......++..|.+||+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~y~aPE~  176 (267)
T 3t9t_A          152 RFVLDDQYTSSTGTKFPVKWASPEV  176 (267)
T ss_dssp             GGBCCHHHHSTTSTTCCGGGCCHHH
T ss_pred             cccccccccccccccccccccChhh
Confidence            8654321  1112234556777764

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.59  E-value=3.8e-15  Score=95.81  Aligned_cols=89  Identities=19%  Similarity=0.298  Sum_probs=70.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHh--hCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIH--SRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh--~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      .+..++||||+.+ +|.+.+...           .++.|++.++.|+|  ..+++|+|++++|+++.. .....++++||
T Consensus       128 ~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~-~~~~~~kL~DF  205 (382)
T 2vx3_A          128 RNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN-PKRSAIKIVDF  205 (382)
T ss_dssp             TTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS-TTSCCEEECCC
T ss_pred             CCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec-CCCCcEEEEec
Confidence            3568999999965 888887542           27899999999999  478999999999999941 12456899999


Q ss_pred             cceecCCCCCCccceeeccceecccc
Q psy14897         73 GLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |++.......  ...++|..|.+||+
T Consensus       206 G~a~~~~~~~--~~~~~t~~y~aPE~  229 (382)
T 2vx3_A          206 GSSCQLGQRI--YQYIQSRFYRSPEV  229 (382)
T ss_dssp             TTCEETTCCC--CSSCSCGGGCCHHH
T ss_pred             cCceeccccc--ccccCCccccChHH
Confidence            9998775432  34678889999985

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.59  E-value=2.4e-15  Score=94.17  Aligned_cols=88  Identities=20%  Similarity=0.261  Sum_probs=63.1

Q ss_pred             CeEEEEEeeCCCCchhhhcc---------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          8 QSCLVFPYSYGTKSGEQIST---------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~---------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      ..++||||+.+|+|.+++..               ..++.|++.++.|||+++++|+|+++.|+++.   ....+++.||
T Consensus       115 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~---~~~~~kl~Df  191 (313)
T 3brb_A          115 KPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLR---DDMTVCVADF  191 (313)
T ss_dssp             CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEEC---TTSCEEECSC
T ss_pred             ccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCcEEEeec
Confidence            46999999999999988731               12789999999999999999999999999994   4556999999


Q ss_pred             cceecCCCCCCc---cceeeccceecccc
Q psy14897         73 GLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      |++..+......   ....++..|.+||.
T Consensus       192 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~  220 (313)
T 3brb_A          192 GLSKKIYSGDYYRQGRIAKMPVKWIAIES  220 (313)
T ss_dssp             SCC----------------CCGGGSCHHH
T ss_pred             CcceecccccccCcccccCCCccccCchh
Confidence            999876443211   22334556777764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.58  E-value=2.8e-15  Score=95.10  Aligned_cols=88  Identities=26%  Similarity=0.340  Sum_probs=69.0

Q ss_pred             CCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ...++||||+. |+|.+.+...        .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||++..+
T Consensus        87 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg~a~~~  162 (353)
T 2b9h_A           87 NEVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN---SNCDLKVCDFGLARII  162 (353)
T ss_dssp             CCEEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTCEEC
T ss_pred             ceEEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc---CCCcEEEEeccccccc
Confidence            56899999998 4888877543        2789999999999999999999999999994   5566999999999876


Q ss_pred             CCCCC-----------ccceeeccceecccc
Q psy14897         79 PSSPS-----------YERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~~-----------~~~~~~t~~~~~~~~   98 (99)
                      .....           ....++|..|.+||+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  193 (353)
T 2b9h_A          163 DESAADNSEPTGQQSGMVEFVATRWYRAPEV  193 (353)
T ss_dssp             C----------------CCCCCCGGGCCHHH
T ss_pred             ccccccccCccccccchhhccccccccCCee
Confidence            43221           122467888888884

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.58  E-value=2e-15  Score=93.75  Aligned_cols=90  Identities=26%  Similarity=0.353  Sum_probs=68.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-----------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEE
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-----------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVY   68 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-----------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~   68 (99)
                      .+..++||||+.+++|.+++..                 ..++.|++.++.|+|+++++|+|+++.|+++.   ....++
T Consensus        85 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~k  161 (303)
T 2vwi_A           85 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQ  161 (303)
T ss_dssp             SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTCCEE
T ss_pred             cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEc---CCCCEE
Confidence            4578999999999999988752                 12789999999999999999999999999994   456699


Q ss_pred             EeeccceecCCCCC------Cccceeeccceecccc
Q psy14897         69 IIDFGLAKNVPSSP------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        69 l~d~g~a~~~~~~~------~~~~~~~t~~~~~~~~   98 (99)
                      +.|||.+..+....      ......+|..|.+||+
T Consensus       162 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  197 (303)
T 2vwi_A          162 IADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV  197 (303)
T ss_dssp             ECCCHHHHHCC---------------CCCTTCCHHH
T ss_pred             EEeccchheeccCCCccchhhhcccCCCccccCHHH
Confidence            99999987664322      1123467788888874

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.58  E-value=5.1e-15  Score=90.61  Aligned_cols=85  Identities=7%  Similarity=0.039  Sum_probs=69.0

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCC--eeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRN--FIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~--i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      ...++||||+.+|+|.+++...           .++.|++.++.|+|+++  ++|+|+++.|+++.   ....+++.+++
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~---~~~~~~l~~~~  158 (271)
T 3kmu_A           82 PHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMID---EDMTARISMAD  158 (271)
T ss_dssp             SSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEEC---TTSCEEEEGGG
T ss_pred             CCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEc---CCcceeEEecc
Confidence            5789999999999999988643           27899999999999999  99999999999994   45567888888


Q ss_pred             ceecCCCCCCccceeeccceecccc
Q psy14897         74 LAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ++......    ...+|..|.+||+
T Consensus       159 ~~~~~~~~----~~~~t~~y~aPE~  179 (271)
T 3kmu_A          159 VKFSFQSP----GRMYAPAWVAPEA  179 (271)
T ss_dssp             SCCTTSCT----TCBSCGGGSCHHH
T ss_pred             ceeeeccc----CccCCccccChhh
Confidence            76553322    3467788888874

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.58  E-value=2.2e-15  Score=94.71  Aligned_cols=88  Identities=24%  Similarity=0.298  Sum_probs=59.4

Q ss_pred             CCeEEEEEeeCCCCchhhhcc------------chHHHHHHHHHHHHhhCC--eeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST------------GKEDREWIGRIDYIHSRN--FIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~------------~~~~~~i~~~l~~lh~~~--i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      ...++||||+. |+|.+++..            ..++.|++.++.|||+++  ++|+|+++.|+++.   ....+++.||
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~---~~~~~kl~Df  182 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS---NQGTIKLCDF  182 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEEC---TTSCEEBCCC
T ss_pred             ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEEC---CCCCEEEecC
Confidence            34789999996 688877653            127899999999999999  99999999999994   5556999999


Q ss_pred             cceecCCCCCCc-------------cceeeccceecccc
Q psy14897         73 GLAKNVPSSPSY-------------ERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~~-------------~~~~~t~~~~~~~~   98 (99)
                      |++..+......             ....+|..|.+||+
T Consensus       183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~  221 (337)
T 3ll6_A          183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEI  221 (337)
T ss_dssp             TTCBCCSSCC-----------------------------
T ss_pred             ccceeccccCcccccccccccchhhccccCCCCcCChhh
Confidence            999876543321             13457888888885

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.58  E-value=2.1e-15  Score=94.47  Aligned_cols=89  Identities=19%  Similarity=0.254  Sum_probs=69.5

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      ...++||||+.+|+|.+.+...             .++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||
T Consensus       103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~---~~~~~kl~dfg  179 (317)
T 2buj_A          103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG---DEGQPVLMDLG  179 (317)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCCS
T ss_pred             ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc---CCCCEEEEecC
Confidence            4678999999999998887641             2789999999999999999999999999994   45569999999


Q ss_pred             ceecCCCCCCc----------cceeeccceecccc
Q psy14897         74 LAKNVPSSPSY----------ERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~~----------~~~~~t~~~~~~~~   98 (99)
                      .+.........          ....+|..|.+||+
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  214 (317)
T 2buj_A          180 SMNQACIHVEGSRQALTLQDWAAQRCTISYRAPEL  214 (317)
T ss_dssp             SCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGG
T ss_pred             cchhcccccccccccccccccccccCCcccCCHhH
Confidence            88765322110          12234777888875

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.57  E-value=3.5e-15  Score=93.29  Aligned_cols=90  Identities=22%  Similarity=0.246  Sum_probs=62.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeec
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDF   72 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~   72 (99)
                      ++..++||||+.+|+|.+++..             ..++.|++.++.|+|+++++|+|+++.|+++.   ....+++.||
T Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~---~~~~~kl~Df  180 (310)
T 2wqm_A          104 DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDL  180 (310)
T ss_dssp             TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCC
T ss_pred             CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEc---CCCCEEEEec
Confidence            3568999999999999988753             12789999999999999999999999999994   4566999999


Q ss_pred             cceecCCCCC-Cccceeeccceecccc
Q psy14897         73 GLAKNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      |.+..+.... ......++..|.+||+
T Consensus       181 g~~~~~~~~~~~~~~~~~~~~y~aPE~  207 (310)
T 2wqm_A          181 GLGRFFSSKTTAAHSLVGTPYYMSPER  207 (310)
T ss_dssp             ------------------CCSSCCHHH
T ss_pred             cceeeecCCCccccccCCCeeEeChHH
Confidence            9988764432 2233467788888874

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.57  E-value=5e-15  Score=92.24  Aligned_cols=89  Identities=21%  Similarity=0.365  Sum_probs=67.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ....++||||+.++ +.+.+..           ..++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.
T Consensus        80 ~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~---~~~~~kl~dfg~  155 (305)
T 2wtk_C           80 KQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT---TGGTLKISALGV  155 (305)
T ss_dssp             --CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTT
T ss_pred             CCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---CCCcEEeecccc
Confidence            35789999999986 5554432           12789999999999999999999999999994   556799999999


Q ss_pred             eecCCCCC---Cccceeeccceecccc
Q psy14897         75 AKNVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                      +.......   ......+|..|.+||+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~  182 (305)
T 2wtk_C          156 AEALHPFAADDTCRTSQGSPAFQPPEI  182 (305)
T ss_dssp             CEECCTTCSSCEECCCCSCGGGCCHHH
T ss_pred             ccccCccccccccccCCCCCCCcChhh
Confidence            98764322   2233457788888874

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.57  E-value=5.6e-15  Score=92.15  Aligned_cols=76  Identities=26%  Similarity=0.385  Sum_probs=63.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      +...++||||+.+|+|.+.+...           .++.|++.++.|+|+++++|+|+++.|+++........+++.|||+
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~  166 (299)
T 3m2w_A           87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF  166 (299)
T ss_dssp             EEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred             CceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence            35689999999999999988643           2789999999999999999999999999996322256799999999


Q ss_pred             eecCCCC
Q psy14897         75 AKNVPSS   81 (99)
Q Consensus        75 a~~~~~~   81 (99)
                      +......
T Consensus       167 a~~~~~~  173 (299)
T 3m2w_A          167 AKETTGE  173 (299)
T ss_dssp             CEECTTC
T ss_pred             ccccccc
Confidence            9876543

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.57  E-value=3e-15  Score=93.63  Aligned_cols=90  Identities=24%  Similarity=0.252  Sum_probs=72.0

Q ss_pred             CCCeEEEEEe-eCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPY-SYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~-~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++|||| +.+++|.+++..+         .++.|++.++.|+|+++++|+|+++.|+++.  .....+++.|||.+
T Consensus       110 ~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--~~~~~~kl~dfg~~  187 (312)
T 2iwi_A          110 QEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILID--LRRGCAKLIDFGSG  187 (312)
T ss_dssp             ---CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEE--TTTTEEEECCCSSC
T ss_pred             CCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEe--CCCCeEEEEEcchh
Confidence            3568999999 7889999988643         2789999999999999999999999999994  34567999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ....... .....++..|.+||+
T Consensus       188 ~~~~~~~-~~~~~~~~~y~aPE~  209 (312)
T 2iwi_A          188 ALLHDEP-YTDFDGTRVYSPPEW  209 (312)
T ss_dssp             EECCSSC-BCCCCSCTTTSCHHH
T ss_pred             hhcccCc-ccccCCcccccCcee
Confidence            8765443 344567888888874

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.55  E-value=1.2e-15  Score=93.99  Aligned_cols=90  Identities=26%  Similarity=0.331  Sum_probs=69.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------hHHHHHHHHHHHHhhCC-----eeecCcCCCcEEEeeCCCCCeE
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------KEDREWIGRIDYIHSRN-----FIHRDIKPDNFLMGLGKRGNLV   67 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------~~~~~i~~~l~~lh~~~-----i~h~~l~~~~~l~~~~~~~~~~   67 (99)
                      ....++||||+++|+|.+++...             .++.|++.++.|+|+.+     ++|+|+++.|+++.   ....+
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~---~~~~~  155 (279)
T 2w5a_A           79 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD---GKQNV  155 (279)
T ss_dssp             GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEEC---SSSCE
T ss_pred             CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEc---CCCCE
Confidence            35689999999999999987532             27899999999999998     99999999999994   45569


Q ss_pred             EEeeccceecCCCCCC-ccceeeccceecccc
Q psy14897         68 YIIDFGLAKNVPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        68 ~l~d~g~a~~~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      ++.|||.+........ .....++..|.+||+
T Consensus       156 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  187 (279)
T 2w5a_A          156 KLGDFGLARILNHDTSFAKTFVGTPYYMSPEQ  187 (279)
T ss_dssp             EECCCCHHHHC---CHHHHHHHSCCTTCCHHH
T ss_pred             EEecCchheeeccccccccccCCCccccChHH
Confidence            9999999987654432 123457778888874

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.55  E-value=3.9e-15  Score=92.49  Aligned_cols=89  Identities=25%  Similarity=0.404  Sum_probs=70.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++||||+. |+|.+++...           .++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||.
T Consensus        74 ~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~  149 (299)
T 2r3i_A           74 ENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGL  149 (299)
T ss_dssp             TTEEEEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECSTTH
T ss_pred             CCceEEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEc---CCCCEEECcchh
Confidence            356899999998 5888877543           2789999999999999999999999999994   556799999999


Q ss_pred             eecCCCCC-Cccceeeccceecccc
Q psy14897         75 AKNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +....... ......+|..|.+||+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~aPE~  174 (299)
T 2r3i_A          150 ARAFGVPVRTYTHEVVTLWYRAPEI  174 (299)
T ss_dssp             HHHHCCCSBCTTSCBCCCTTCCHHH
T ss_pred             hhhccCCccccCcccccccccCcHH
Confidence            87754332 2234467888888874

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.55  E-value=5.7e-15  Score=94.17  Aligned_cols=88  Identities=26%  Similarity=0.343  Sum_probs=70.3

Q ss_pred             CeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhC-CeeecCcCCCcEEEeeC---CCCCeEEEeec
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSR-NFIHRDIKPDNFLMGLG---KRGNLVYIIDF   72 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~-~i~h~~l~~~~~l~~~~---~~~~~~~l~d~   72 (99)
                      ..++||||+ +++|.+.+...           .++.|++.++.|||++ +++|+|+++.|+++...   .....++++||
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Df  182 (373)
T 1q8y_A          104 HVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADL  182 (373)
T ss_dssp             EEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCC
T ss_pred             eEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEccc
Confidence            578999999 88998887541           2789999999999998 99999999999998422   12236899999


Q ss_pred             cceecCCCCCCccceeeccceecccc
Q psy14897         73 GLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        73 g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |++.......  ....+|..|.+||+
T Consensus       183 g~a~~~~~~~--~~~~~t~~y~aPE~  206 (373)
T 1q8y_A          183 GNACWYDEHY--TNSIQTREYRSPEV  206 (373)
T ss_dssp             TTCEETTBCC--CSCCSCGGGCCHHH
T ss_pred             ccccccCCCC--CCCCCCccccCcHH
Confidence            9998765432  34578889999885

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.54  E-value=1.1e-15  Score=95.07  Aligned_cols=90  Identities=18%  Similarity=0.307  Sum_probs=67.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+++|.+++..          ..++.|++.++.|+|+++++|+|+++.|+++.   ....+++.|||++
T Consensus        88 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~  164 (302)
T 2j7t_A           88 DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT---LEGDIRLADFGVS  164 (302)
T ss_dssp             C-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTSCEEECCCHHH
T ss_pred             CCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEC---CCCCEEEEECCCC
Confidence            4578999999999999887753          12789999999999999999999999999994   4566999999987


Q ss_pred             ecCCCC-CCccceeeccceecccc
Q psy14897         76 KNVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      ...... .......+|..|.+||+
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~  188 (302)
T 2j7t_A          165 AKNLKTLQKRDSFIGTPYWMAPEV  188 (302)
T ss_dssp             HHHHHHHHC-----CCGGGCCHHH
T ss_pred             ccccccccccccccCChhhcCCee
Confidence            543111 11123467777888874

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.54  E-value=6.9e-15  Score=94.34  Aligned_cols=84  Identities=27%  Similarity=0.411  Sum_probs=64.0

Q ss_pred             eEEEEEeeCCCCchhhhcc-------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCC
Q psy14897          9 SCLVFPYSYGTKSGEQIST-------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS   81 (99)
Q Consensus         9 ~~~v~e~~~~g~l~~~l~~-------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~   81 (99)
                      .++||||+. ++|.+.+..       ..++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||.++.....
T Consensus       122 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kL~Dfg~a~~~~~~  197 (371)
T 4exu_A          122 FYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKILDFGLARHADAE  197 (371)
T ss_dssp             CEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECSTTCC------
T ss_pred             EEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEEC---CCCCEEEEecCcccccccC
Confidence            499999998 477776643       23789999999999999999999999999994   5566999999999865443


Q ss_pred             CCccceeeccceecccc
Q psy14897         82 PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        82 ~~~~~~~~t~~~~~~~~   98 (99)
                      .  ...++|..|.+||+
T Consensus       198 ~--~~~~~t~~y~aPE~  212 (371)
T 4exu_A          198 M--TGYVVTRWYRAPEV  212 (371)
T ss_dssp             ----CTTCCCTTSCHHH
T ss_pred             c--CCcccCccccCHHH
Confidence            2  34567888988874

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.53  E-value=5.3e-15  Score=93.11  Aligned_cols=89  Identities=19%  Similarity=0.275  Sum_probs=57.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc--------------chHHHHHHHHHHHHhhC-CeeecCcCCCcEEEeeCCCCCeEEEe
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST--------------GKEDREWIGRIDYIHSR-NFIHRDIKPDNFLMGLGKRGNLVYII   70 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~--------------~~~~~~i~~~l~~lh~~-~i~h~~l~~~~~l~~~~~~~~~~~l~   70 (99)
                      .+..++||||+.+ +|.+.+..              ..++.|++.++.|+|+. +++|+|+++.|+++.   ....+++.
T Consensus        93 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~---~~~~~kl~  168 (327)
T 3aln_A           93 EGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD---RSGNIKLC  168 (327)
T ss_dssp             SSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEE---TTTEEEEC
T ss_pred             CCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEc---CCCCEEEc
Confidence            4568999999986 66665541              13789999999999998 999999999999995   55679999


Q ss_pred             eccceecCCCCCCccceeeccceecccc
Q psy14897         71 DFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        71 d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      |||+++.+..........+|..|.+||+
T Consensus       169 Dfg~~~~~~~~~~~~~~~gt~~y~aPE~  196 (327)
T 3aln_A          169 DFGISGQLVDSIAKTRDAGCRPYMAPER  196 (327)
T ss_dssp             CCSSSCC---------------------
T ss_pred             cCCCceecccccccccCCCCccccCcee
Confidence            9999987765544445578888999885

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.53  E-value=1.2e-14  Score=92.53  Aligned_cols=85  Identities=27%  Similarity=0.416  Sum_probs=65.1

Q ss_pred             CeEEEEEeeCCCCchhhhcc-------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCC
Q psy14897          8 QSCLVFPYSYGTKSGEQIST-------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPS   80 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~-------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~   80 (99)
                      ..++||||+. |+|.+.+..       ..++.|++.++.|||+++++|+|+++.|+++.   ....+++.|||.+.....
T Consensus       103 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~  178 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKILDFGLARHADA  178 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---TTCCEEECSTTCTTC---
T ss_pred             eEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeEC---CCCcEEEeecccccCCCC
Confidence            3599999998 488776643       23789999999999999999999999999994   456699999999876543


Q ss_pred             CCCccceeeccceecccc
Q psy14897         81 SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        81 ~~~~~~~~~t~~~~~~~~   98 (99)
                      .  .....+|..|.+||+
T Consensus       179 ~--~~~~~~t~~y~aPE~  194 (353)
T 3coi_A          179 E--MTGYVVTRWYRAPEV  194 (353)
T ss_dssp             -------CCSBCCSCHHH
T ss_pred             C--ccccccCcCcCCHHH
Confidence            3  234567888888874

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.52  E-value=1.1e-14  Score=91.19  Aligned_cols=88  Identities=19%  Similarity=0.322  Sum_probs=65.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+..++||| +.+++|.+++...         .++.|++.++.|+|+++++|+|+++.|+++.    ...+++.|||++.
T Consensus       100 ~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~----~~~~kL~Dfg~~~  174 (313)
T 3cek_A          100 DQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIAN  174 (313)
T ss_dssp             SSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSC
T ss_pred             CCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE----CCeEEEeeccccc
Confidence            356899999 5677998887643         2789999999999999999999999999994    3569999999998


Q ss_pred             cCCCCCC---ccceeeccceecccc
Q psy14897         77 NVPSSPS---YERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~---~~~~~~t~~~~~~~~   98 (99)
                      .+.....   .....+|..|.+||+
T Consensus       175 ~~~~~~~~~~~~~~~gt~~y~aPE~  199 (313)
T 3cek_A          175 QMQPDTTSVVKDSQVGTVNYMPPEA  199 (313)
T ss_dssp             C--------------CCGGGCCHHH
T ss_pred             cccCccccccccCCCCCCCcCCHHH
Confidence            7644322   133467888888875

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.51  E-value=1.1e-14  Score=91.09  Aligned_cols=89  Identities=20%  Similarity=0.355  Sum_probs=59.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhC-CeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSR-NFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~-~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .+..++||||+ ++.+......          ..++.|++.++.|+|++ +++|+|+++.|+++.   ....+++.|||+
T Consensus        96 ~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~  171 (318)
T 2dyl_A           96 NTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD---ERGQIKLCDFGI  171 (318)
T ss_dssp             SSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEEC---TTSCEEECCCTT
T ss_pred             CCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEEC---CCCCEEEEECCC
Confidence            45689999999 3344333321          13789999999999995 999999999999994   456699999999


Q ss_pred             eecCCCCCCccceeeccceecccc
Q psy14897         75 AKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +..+..........+|..|.+||+
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~  195 (318)
T 2dyl_A          172 SGRLVDDKAKDRSAGCAAYMAPER  195 (318)
T ss_dssp             C--------------CCTTCCHHH
T ss_pred             chhccCCccccccCCCccccChhh
Confidence            987765544455678888888875

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.48  E-value=4.7e-14  Score=91.77  Aligned_cols=84  Identities=10%  Similarity=0.110  Sum_probs=64.4

Q ss_pred             CeEEEEEeeCCCCchhhhcc----------------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEee
Q psy14897          8 QSCLVFPYSYGTKSGEQIST----------------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIID   71 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~----------------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d   71 (99)
                      ..+++|+++ +++|.++++.                ..++.|++.++.|||+++++|+|+|++|+++.   ....+++.|
T Consensus       179 ~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~---~~~~~kL~D  254 (413)
T 3dzo_A          179 SRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD---QRGGVFLTG  254 (413)
T ss_dssp             SEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECC
T ss_pred             ceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEe---cCCeEEEEe
Confidence            356666655 5688887731                12569999999999999999999999999995   455599999


Q ss_pred             ccceecCCCCCCccceeeccceecccc
Q psy14897         72 FGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        72 ~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ||+++.....  ....++ ..|.+||+
T Consensus       255 FG~a~~~~~~--~~~~~g-~~y~aPE~  278 (413)
T 3dzo_A          255 FEHLVRDGAS--AVSPIG-RGFAPPET  278 (413)
T ss_dssp             GGGCEETTEE--ECCCCC-TTTCCHHH
T ss_pred             ccceeecCCc--cccCCC-CceeCchh
Confidence            9998875433  334566 88888875

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.40  E-value=3.1e-13  Score=84.17  Aligned_cols=66  Identities=12%  Similarity=0.007  Sum_probs=55.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch-------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK-------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~-------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++||||+++++|.++++...       ++.|++.++.|+|+++++|+|++++|+++.   ....+++.+.+.
T Consensus       103 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~---~~g~~kl~~~~~  175 (286)
T 3uqc_A          103 RAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVS---IDGDVVLAYPAT  175 (286)
T ss_dssp             TTEEEEEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE---TTSCEEECSCCC
T ss_pred             CCcEEEEEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEc---CCCCEEEEeccc
Confidence            356899999999999999886532       789999999999999999999999999995   445577775554

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.38  E-value=1.5e-12  Score=80.09  Aligned_cols=70  Identities=16%  Similarity=0.197  Sum_probs=55.9

Q ss_pred             CCeEEEEEeeCC-C----Cchhhhcc------chHHHHHHHHHHHHh-hCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          7 TQSCLVFPYSYG-T----KSGEQIST------GKEDREWIGRIDYIH-SRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         7 ~~~~~v~e~~~~-g----~l~~~l~~------~~~~~~i~~~l~~lh-~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      +..++||||+.+ |    .|.+....      ..++.|++.++.++| +.+++|+|++|.|+++.   .  .++++|||+
T Consensus       141 ~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~---~--~~~liDFG~  215 (258)
T 1zth_A          141 MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYI---D--KVYFIDMGQ  215 (258)
T ss_dssp             ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEES---S--SEEECCCTT
T ss_pred             CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEc---C--cEEEEECcc
Confidence            456899999942 4    55554432      347899999999999 99999999999999994   2  689999999


Q ss_pred             eecCCCC
Q psy14897         75 AKNVPSS   81 (99)
Q Consensus        75 a~~~~~~   81 (99)
                      |......
T Consensus       216 a~~~~~~  222 (258)
T 1zth_A          216 AVTLRHP  222 (258)
T ss_dssp             CEETTST
T ss_pred             cccCCCc
Confidence            9876433

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.11  E-value=7e-11  Score=76.79  Aligned_cols=72  Identities=18%  Similarity=0.149  Sum_probs=55.3

Q ss_pred             CCeEEEEEeeCCCCchhhhcc---chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCC-------CeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST---GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRG-------NLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~---~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~-------~~~~l~d~g~a~   76 (99)
                      ...++||||++|+++......   ..++.|++.++.++|..+++|+|++|.|+++..+...       ..+.++||+-+-
T Consensus       184 ~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          184 SRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             ETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred             cCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence            345799999999888765532   3478999999999999999999999999999632211       136788988765


Q ss_pred             cC
Q psy14897         77 NV   78 (99)
Q Consensus        77 ~~   78 (99)
                      ..
T Consensus       264 ~~  265 (397)
T 4gyi_A          264 SM  265 (397)
T ss_dssp             ET
T ss_pred             cC
Confidence            54

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.28  E-value=1.4e-06  Score=53.11  Aligned_cols=67  Identities=25%  Similarity=0.290  Sum_probs=52.3

Q ss_pred             CCeEEEEEeeCCCCchhhh----ccchHHHHHHHHHHHHhh---------------------------------------
Q psy14897          7 TQSCLVFPYSYGTKSGEQI----STGKEDREWIGRIDYIHS---------------------------------------   43 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l----~~~~~~~~i~~~l~~lh~---------------------------------------   43 (99)
                      +..++||||++|.++.+.+    ....++.++...+..+|+                                       
T Consensus        83 ~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (263)
T 3tm0_A           83 GWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT  162 (263)
T ss_dssp             TEEEEEEECCSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTC
T ss_pred             CceEEEEEecCCeehhhccCCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccc
Confidence            4578999999998887753    123477888888999998                                       


Q ss_pred             --------------------CCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897         44 --------------------RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus        44 --------------------~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                                          ..++|.|+.+.|+++.   .+....+.||+.+.
T Consensus       163 ~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~---~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          163 PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVK---DGKVSGFIDLGRSG  212 (263)
T ss_dssp             SSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEE---TTEEEEECCCTTCE
T ss_pred             cCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEE---CCcEEEEEEchhcc
Confidence                                4489999999999984   34445799998764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.26  E-value=1.6e-06  Score=52.39  Aligned_cols=68  Identities=15%  Similarity=0.173  Sum_probs=49.4

Q ss_pred             CCeEEEEEeeCCCCch-hhhccchHHHHHHHHHHHHhhCC----------------------------------------
Q psy14897          7 TQSCLVFPYSYGTKSG-EQISTGKEDREWIGRIDYIHSRN----------------------------------------   45 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~-~~l~~~~~~~~i~~~l~~lh~~~----------------------------------------   45 (99)
                      +..++||||++|.++. .......+..++...+..+|+..                                        
T Consensus        88 ~~~~~v~e~i~G~~l~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (264)
T 1nd4_A           88 GRDWLLLGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP  167 (264)
T ss_dssp             SCEEEEEECCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred             CCCEEEEEecCCcccCcCcCCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence            4579999999998884 11111246677777777777643                                        


Q ss_pred             ------------------eeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897         46 ------------------FIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus        46 ------------------i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                                        ++|+|+++.|+++.   .+....+.||+.+..
T Consensus       168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~---~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          168 AELFARLKARMPDGEDLVVTHGDACLPNIMVE---NGRFSGFIDCGRLGV  214 (264)
T ss_dssp             HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEE---TTEEEEECCCTTCEE
T ss_pred             HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEE---CCcEEEEEcchhccc
Confidence                              99999999999994   344456999998764

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.88  E-value=4.5e-05  Score=48.54  Aligned_cols=69  Identities=16%  Similarity=0.284  Sum_probs=49.7

Q ss_pred             CCeEEEEEeeCCCCchhh-hc------cchHHHHHHHHHHHHhh------------------------------------
Q psy14897          7 TQSCLVFPYSYGTKSGEQ-IS------TGKEDREWIGRIDYIHS------------------------------------   43 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~-l~------~~~~~~~i~~~l~~lh~------------------------------------   43 (99)
                      +..++||||+.|..+.+. +.      ...+..++...+..+|+                                    
T Consensus       114 g~~~~vme~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (359)
T 3dxp_A          114 GRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES  193 (359)
T ss_dssp             SSCEEEEECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred             CCeEEEEEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence            347899999999877431 11      12356777888888886                                    


Q ss_pred             ----------------------CCeeecCcCCCcEEEeeCCCC-CeEEEeeccceec
Q psy14897         44 ----------------------RNFIHRDIKPDNFLMGLGKRG-NLVYIIDFGLAKN   77 (99)
Q Consensus        44 ----------------------~~i~h~~l~~~~~l~~~~~~~-~~~~l~d~g~a~~   77 (99)
                                            ..++|+|+++.|+++.  ..+ ..+.+.||+.+..
T Consensus       194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~--~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFH--PTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEEC--SSSSCEEEECCCTTCEE
T ss_pred             ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEe--CCCCcEEEEECcccccc
Confidence                                  3689999999999994  222 3468999998753

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=96.78  E-value=0.002  Score=40.02  Aligned_cols=31  Identities=35%  Similarity=0.549  Sum_probs=24.5

Q ss_pred             CeeecCcCCCcEEEeeCCC-CCeEEEeeccceec
Q psy14897         45 NFIHRDIKPDNFLMGLGKR-GNLVYIIDFGLAKN   77 (99)
Q Consensus        45 ~i~h~~l~~~~~l~~~~~~-~~~~~l~d~g~a~~   77 (99)
                      .++|.|+.+.|+++.  .. ...+.+.||+.+..
T Consensus       192 ~~~HgD~~~~N~l~~--~~~~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          192 CLIHNDFSSDHILFD--TEKNTICGIIDFGDAAI  223 (304)
T ss_dssp             EEECSCCCGGGEEEE--TTTTEEEEECCCTTCEE
T ss_pred             eeEeCCCCcccEEEe--CCCCCEEEEEeCCCCcc
Confidence            479999999999995  21 45578999998764

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=96.16  E-value=0.022  Score=35.52  Aligned_cols=33  Identities=45%  Similarity=0.694  Sum_probs=24.1

Q ss_pred             CeeecCcCCCcEEEeeCC-CCCeEEEeeccceec
Q psy14897         45 NFIHRDIKPDNFLMGLGK-RGNLVYIIDFGLAKN   77 (99)
Q Consensus        45 ~i~h~~l~~~~~l~~~~~-~~~~~~l~d~g~a~~   77 (99)
                      .++|.|+.+.|+++..+. .+....+.||+.+..
T Consensus       191 ~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          191 RLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             EEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             eeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            579999999999995110 144458999987754

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=95.27  E-value=0.066  Score=32.36  Aligned_cols=29  Identities=31%  Similarity=0.486  Sum_probs=22.8

Q ss_pred             eeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897         46 FIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus        46 i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ++|.|+.+.|+++.   ......+.||+.+..
T Consensus       195 l~HGDl~~~Nil~~---~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          195 VTHGDFSLDNLIFD---EGKLIGCIDVGRVGI  223 (272)
T ss_dssp             EECSCCCTTSEEEE---TTEEEEECCCTTCEE
T ss_pred             EEcCCCCCCeEEEE---CCeEEEEEECccccc
Confidence            78999999999994   344566899887653

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=93.65  E-value=0.15  Score=32.11  Aligned_cols=30  Identities=17%  Similarity=0.241  Sum_probs=23.9

Q ss_pred             CCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897         44 RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus        44 ~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ..++|.|+.+.|+++.   ......+.||..+.
T Consensus       222 ~~l~HgDl~~~Nil~~---~~~~~~vIDwe~a~  251 (357)
T 3ats_A          222 PVLLWGDARVGNVLYR---DFQPVAVLDWEMVA  251 (357)
T ss_dssp             CEEECSSCSGGGEEEE---TTEEEEECCGGGCE
T ss_pred             ceEEeCCCCCCeEEEe---CCcEEEEEcccccc
Confidence            4689999999999985   33446899998765

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=92.80  E-value=0.31  Score=30.05  Aligned_cols=28  Identities=29%  Similarity=0.440  Sum_probs=21.8

Q ss_pred             CeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897         45 NFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus        45 ~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .++|.|+.+.|++.    ....+.+.||..+.
T Consensus       174 ~l~HgDl~~~Nil~----~~~~~~lID~e~a~  201 (301)
T 3dxq_A          174 AACHCDPLCENFLD----TGERMWIVDWEYSG  201 (301)
T ss_dssp             EEECSCCCGGGEEE----CSSCEEECCCTTCE
T ss_pred             eeeccCCCcCCEEE----CCCCEEEEeccccc
Confidence            37999999999995    22346899998765

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=91.06  E-value=0.51  Score=29.24  Aligned_cols=30  Identities=27%  Similarity=0.551  Sum_probs=24.6

Q ss_pred             CCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897         44 RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus        44 ~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ..++|+|+.+.|+++.   ....+.+.||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~---~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLG---ENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEEC---GGGCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEe---CCCcEEEEehhhcc
Confidence            5799999999999983   33458899999775

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=80.09  E-value=2.4  Score=27.43  Aligned_cols=32  Identities=16%  Similarity=0.344  Sum_probs=25.3

Q ss_pred             hhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897         42 HSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus        42 h~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +...++|.|+.+.|+++.   .+. +.+.||+.+..
T Consensus       230 ~~~~liHGDl~~~Nil~~---~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVT---QDS-TQVIDPEFSFY  261 (420)
T ss_dssp             BCCEEECSCCSGGGEEEC---SSC-EEECCCTTCEE
T ss_pred             CCCeEEecCCCCCcEEEe---CCC-CEEEeCccccc
Confidence            356799999999999984   223 88999987764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	99
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-11
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	5e-11
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-10
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-10
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	8e-10
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-09
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-09
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-09
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-09
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	6e-09
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	7e-09
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-08
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-08
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-08
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-08
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-08
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-08
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-08
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-08
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-07
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-07
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-07
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-07
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-07
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-07
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-07
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	5e-07
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	5e-07
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	6e-07
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	9e-07
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-06
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-06
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-06
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-06
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	4e-06
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-06
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	6e-06
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	7e-06
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	9e-06
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-05
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-05
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-05
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-05
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	7e-05
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-04
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-04
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-04
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-04
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-04
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-04
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-04
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-04
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-04
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	5e-04
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-04
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	0.003
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	0.004

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (132), Expect = 5e-11
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVT 89
           + Y HS+  IHRDIKP+N L+G       + I DFG + + PSS       T
Sbjct: 119 LSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTTLCGT 167

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 5e-11
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTT 93
           ++++  ++ +HRD+   N L+     G +V I DFGLA+++ S  +Y      +  
Sbjct: 177 MEFLEFKSCVHRDLAARNVLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLP 229

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 53.7 bits (128), Expect = 2e-10
 Identities = 35/58 (60%), Positives = 45/58 (77%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRI 95
           I+YIHS+NFIHRD+KPDNFLMGLGK+GNLVYIIDFGLAK    + +++     +   +
Sbjct: 116 IEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL 173

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 3e-10
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
           ++Y+H    IHRD+K  N L      G+ + + DFG++     +       
Sbjct: 123 LNYLHDNKIIHRDLKAGNIL--FTLDGD-IKLADFGVSAKNTRTIQRRDSF 170

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 8e-10
 Identities = 18/90 (20%), Positives = 38/90 (42%), Gaps = 13/90 (14%)

Query: 10  CLVFPY-SYGTKSGEQISTGKEDREWIGRI--------DYIHSRN-FIHRDIKPDNFLMG 59
            +   +   G+        G+   + +G++         Y+  ++  +HRD+KP N L  
Sbjct: 80  SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL-- 137

Query: 60  LGKRGNLVYIIDFGLAKNVPSSPSYERHVT 89
           +  RG  + + DFG++  +  S +     T
Sbjct: 138 VNSRGE-IKLCDFGVSGQLIDSMANSFVGT 166

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 51.7 bits (123), Expect = 8e-10
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 12/89 (13%)

Query: 10  CLVFPYSYGTKSGEQISTGKEDREWIGR---------IDYIHSRNFIHRDIKPDNFLMGL 60
             +     G      +S      E   R         ++++H+R  ++RD+KP N L  L
Sbjct: 83  SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANIL--L 140

Query: 61  GKRGNLVYIIDFGLAKNVPSSPSYERHVT 89
            + G+ V I D GLA +      +    T
Sbjct: 141 DEHGH-VRISDLGLACDFSKKKPHASVGT 168

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 50.6 bits (120), Expect = 2e-09
 Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLG--KRGNLVYIIDFGLAKNVPSSPSYERHVT 89
           ++ + R+  IH ++ ++RDIKPDNFL+G    K  N++Y++DFG+ K      + +    
Sbjct: 108 KQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPY 167

Query: 90  TQTTRI 95
            +   +
Sbjct: 168 REKKNL 173

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 2e-09
 Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 12/93 (12%)

Query: 10  CLVFPYSYGTKSGEQISTGKEDREWIGR---------IDYIHSRNFIHRDIKPDNFLMGL 60
            L   Y  G +  ++I       E   +         + Y+H     HRDIKP+N L  L
Sbjct: 79  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLL--L 136

Query: 61  GKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTT 93
            +R N + I DFGLA     +           T
Sbjct: 137 DERDN-LKISDFGLATVFRYNNRERLLNKMCGT 168

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.8 bits (118), Expect = 4e-09
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTT 93
           + Y+  R F+HRD+   N L  +G+    V I DFGL++N+ S+  Y+        
Sbjct: 153 MAYLSERKFVHRDLATRNCL--VGENMV-VKIADFGLSRNIYSADYYKADGNDAIP 205

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 5e-09
 Identities = 20/59 (33%), Positives = 28/59 (47%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           +     I Y+HS N  HRD+KP+N L    +   ++ + DFG AK   S  S      T
Sbjct: 118 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 176

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (117), Expect = 6e-09
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTT 93
           +DY+H+++ IHRD+K +N    L +    V I DFGLA          +      +
Sbjct: 117 MDYLHAKSIIHRDLKSNNIF--LHEDLT-VKIGDFGLATVKSRWSGSHQFEQLSGS 169

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.8 bits (116), Expect = 7e-09
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           + Y+HS N IHRD+K  N L+       LV + DFG A  +  + S+
Sbjct: 128 LAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPANSF 171

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 2e-08
 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           + ++HS N  H DI+P+N +    +    + II+FG A+ +    ++    T 
Sbjct: 115 LQFLHSHNIGHFDIRPENIIYQTRRSST-IKIIEFGQARQLKPGDNFRLLFTA 166

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 47.4 bits (112), Expect = 3e-08
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           I  +H  N +HRD+KP+N L+        + + DFG +  +           T
Sbjct: 123 ICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGT 172

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 3e-08
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%)

Query: 38  IDYIHSRN--FIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVT 89
           + ++H+R    IHRD+K DN    +      V I D GLA    +S +     T
Sbjct: 125 LQFLHTRTPPIIHRDLKCDNIF--ITGPTGSVKIGDLGLATLKRASFAKAVIGT 176

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 47.4 bits (112), Expect = 3e-08
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           + ++H  N++H D+KP+N +    +   L  +IDFGL  ++    S 
Sbjct: 137 LCHMHENNYVHLDLKPENIMFTTKRSNELK-LIDFGLTAHLDPKQSV 182

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 4e-08
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIG 96
           + Y+  +NF+HRD+   N L  L  R     I DFGL+K + +  SY    +     + 
Sbjct: 122 MKYLEEKNFVHRDLAARNVL--LVNRHY-AKISDFGLSKALGADDSYYTARSAGKWPLK 177

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 5e-08
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ 91
            +    + Y+   N++HRD++  N L  +G+      + DFGLA+ +  +    R     
Sbjct: 120 AQIASGMAYVERMNYVHRDLRAANIL--VGENLV-CKVADFGLARLIEDNEYTARQGAKF 176

Query: 92  TTR 94
             +
Sbjct: 177 PIK 179

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 5e-08
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           + +I  RN+IHRD++  N L+          I DFGLA+ +  +    R       +
Sbjct: 122 MAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 175

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 46.6 bits (110), Expect = 5e-08
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           + ++H  + +H DIKP+N +    K  + V IIDFGLA  +      +    T
Sbjct: 140 LKHMHEHSIVHLDIKPENIMCETKKASS-VKIIDFGLATKLNPDEIVKVTTAT 191

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (107), Expect = 1e-07
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVT 89
            E +  ++Y+H +  IHRD+KP+N L+        + I DFG AK +       R  +
Sbjct: 115 AEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANS 169

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 1e-07
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
           + YIHS    HRDIKP N    L     ++ + DFG AK +        ++
Sbjct: 135 LAYIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 183

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 2e-07
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 11/87 (12%)

Query: 10  CLVFPYSYGTKSGEQISTGKEDREWIGRI--------DYIHSRNFIHRDIKPDNFLMGLG 61
            +V  Y  G    + ++    D   I  +        +++HS   IHRDIK DN L  LG
Sbjct: 93  WVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNIL--LG 150

Query: 62  KRGNLVYIIDFGLAKNVPSSPSYERHV 88
             G++    DFG    +    S    +
Sbjct: 151 MDGSVKL-TDFGFCAQITPEQSKRSTM 176

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.4 bits (104), Expect = 3e-07
 Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 3/39 (7%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK 76
            +Y+HS + I+RD+KP+N L  + ++G  + + DFG AK
Sbjct: 154 FEYLHSLDLIYRDLKPENLL--IDQQGY-IQVTDFGFAK 189

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (104), Expect = 3e-07
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTT 93
           ++++ SR  IHRD+   N L  L ++   V I DFGLA+++   P Y R    +  
Sbjct: 147 MEFLASRKCIHRDLAARNIL--LSEKNV-VKICDFGLARDIYKDPDYVRKGDARLP 199

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 3e-07
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTT 93
           + ++ S+N IHRD+   N L+     G +  I DFGLA+++ +  +Y      +  
Sbjct: 158 MAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIKNDSNYVVKGNARLP 210

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.4 bits (104), Expect = 3e-07
 Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ 91
           R     + Y+   N++HRD+   N L  +        + DFGL++ +    S   + +  
Sbjct: 135 RGIAAGMKYLADMNYVHRDLAARNIL--VNSNLV-CKVSDFGLSRFLEDDTSDPTYTSAL 191

Query: 92  TTRI 95
             +I
Sbjct: 192 GGKI 195

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 3e-07
 Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 11/101 (10%)

Query: 4   FRSTQSCLVFPYSYGTKSGEQISTGKEDREWIGRI--------DYIHSRNFIHRDIKPDN 55
               +   +  +  G    + + T     + I            YIHS N +HRD+KP N
Sbjct: 80  IEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN 139

Query: 56  FLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIG 96
            L  L    + + I DFGLA+       +   +T       
Sbjct: 140 LL--LNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRW 177

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.9 bits (103), Expect = 4e-07
 Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 3/47 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
           ++Y+HS++ I+RD+KP+N L  L K G+ + I DFG AK VP     
Sbjct: 117 LEYLHSKDIIYRDLKPENIL--LDKNGH-IKITDFGFAKYVPDVTYT 160

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 43.6 bits (102), Expect = 5e-07
 Identities = 10/49 (20%), Positives = 18/49 (36%), Gaps = 6/49 (12%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV--PSSPSY 84
           +   + R  +H D+   N L+        ++IIDF  +  V        
Sbjct: 116 VAKFYHRGIVHGDLSQYNVLVS----EEGIWIIDFPQSVEVGEEGWREI 160

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 43.7 bits (102), Expect = 5e-07
 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 8/87 (9%)

Query: 10  CLVFPYSYGTKSGEQISTGKED------REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKR 63
            LVF +   T   +   T  +        E +  +DY HS   +HRD+KP N +  +   
Sbjct: 108 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHE 165

Query: 64  GNLVYIIDFGLAKNVPSSPSYERHVTT 90
              + +ID+GLA+       Y   V +
Sbjct: 166 HRKLRLIDWGLAEFYHPGQEYNVRVAS 192

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 6e-07
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
            + +  +D++HS   +HRD+KP N L  +   G  + + DFGLA+      +    V T
Sbjct: 123 FQLLRGLDFLHSHRVVHRDLKPQNIL--VTSSGQ-IKLADFGLARIYSFQMALTSVVVT 178

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 9e-07
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 8/56 (14%)

Query: 38  IDYIHSRN-----FIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
           +   H R+      +HRD+KP N    L  + N V + DFGLA+ +    S+ +  
Sbjct: 122 LKECHRRSDGGHTVLHRDLKPANVF--LDGKQN-VKLGDFGLARILNHDTSFAKAF 174

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 2e-06
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ 91
            +    + Y+ S+ FIHRD+   N L  L  R   V I DFGL + +P +  +      +
Sbjct: 118 VQVAEGMGYLESKRFIHRDLAARNLL--LATRDL-VKIGDFGLMRALPQNDDHYVMQEHR 174

Query: 92  TTRIGRID 99
                   
Sbjct: 175 KVPFAWCA 182

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 2e-06
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTT 93
           ++Y+  R  +HRD+   N L  +    + V I DFGLAK + +          +  
Sbjct: 124 MNYLEDRRLVHRDLAARNVL--VKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVP 176

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 2e-06
 Identities = 14/54 (25%), Positives = 18/54 (33%), Gaps = 3/54 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ 91
           +         HRD+K  N L  + K G    I D GLA    S+          
Sbjct: 121 VGTQGKPAIAHRDLKSKNIL--VKKNGT-CCIADLGLAVRHDSATDTIDIAPNH 171

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 3e-06
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGR 97
           + Y+   NF+HRD+   N L  L  +     I DFGL+K + +  +Y +  T     +  
Sbjct: 120 MKYLEESNFVHRDLAARNVL--LVTQHY-AKISDFGLSKALRADENYYKAQTHGKWPVKW 176

Query: 98  ID 99
             
Sbjct: 177 YA 178

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 4e-06
 Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 14/96 (14%)

Query: 10  CLVFPYSYGTKSGEQIST-GKEDREWIGRI--------DYIHSRNFIHRDIKPDNFLMGL 60
            LVF +     +G   +   K     I R+         YIH    +HRD+K  N L+  
Sbjct: 93  YLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT- 151

Query: 61  GKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIG 96
             R  ++ + DFGLA+    S +        T R+ 
Sbjct: 152 --RDGVLKLADFGLARAF--SLAKNSQPNRYTNRVV 183

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 41.0 bits (95), Expect = 5e-06
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 3/61 (4%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ 91
            + +  I Y H R  +HRD+KP N L+    R   + I DFGLA+          H    
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEIVT 163

Query: 92  T 92
            
Sbjct: 164 L 164

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 6e-06
 Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 39  DYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRI 98
            Y+ + N++HRD+   N L  +        + DFGL++ +   P      +     I   
Sbjct: 124 KYLANMNYVHRDLAARNIL--VNSNLV-CKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT 180

Query: 99  D 99
            
Sbjct: 181 A 181

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 7e-06
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           +DY+  + FIHRD+   N L+G      +  I DFGL++              
Sbjct: 140 MDYLSQKQFIHRDLAARNILVG---ENYVAKIADFGLSRGQEVYVKKTMGRLP 189

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 9e-06
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
           ++Y+HSR+ ++RDIK +N +  L K G+ + I DFGL K   S  +  +  
Sbjct: 118 LEYLHSRDVVYRDIKLENLM--LDKDGH-IKITDFGLCKEGISDGATMKTF 165

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 1e-05
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVT 89
           + + H+   +HRDIK +N L  +      + +IDFG    +  +   +   T
Sbjct: 123 VRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSGALLKDTVYTDFDGT 172

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.3 bits (91), Expect = 2e-05
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY 84
            +    ++Y+  +NFIHRD+   N L  +G+    V + DFGL++ +      
Sbjct: 122 TQISSAMEYLEKKNFIHRDLAARNCL--VGENHL-VKVADFGLSRLMTGDTYT 171

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 2e-05
 Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 13/93 (13%)

Query: 10  CLVFPYSYGTKSGEQISTGKEDREWIGRIDYI----------HSRNFIHRDIKPDNFLMG 59
            +V PY         I     +      I +            S+ F+HRD+   N ++ 
Sbjct: 105 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML- 163

Query: 60  LGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQT 92
                  V + DFGLA+++        H  T  
Sbjct: 164 --DEKFTVKVADFGLARDMYDKEFDSVHNKTGA 194

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 3e-05
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS 83
           ++Y+   NF+HRD+   N L+      N+  + DFGL K   S+  
Sbjct: 116 MEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQD 158

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 4e-05
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           + Y+ S+ F+HRDI   N L+      + V + DFGL++ +  S  Y+        +
Sbjct: 121 LAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 174

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 7e-05
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
           + + HSRN +HRD+KP N L+    R   + + +FGLA+            
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLARAFGIPVRCYSAE 161

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 1e-04
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           + Y+     IHRD+   N L  +G+    + + DFG+ + V          T    +
Sbjct: 114 MAYLEEACVIHRDLAARNCL--VGENQV-IKVSDFGMTRFVLDDQYTSSTGTKFPVK 167

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 1e-04
 Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 10/92 (10%)

Query: 10  CLVFPYSYGTKSGEQISTGKEDREWIGR---------IDYIHSRNFIHRDIKPDNFLM-G 59
            L+     G +  + ++  +   E             + Y+HS    H D+KP+N ++  
Sbjct: 89  ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 148

Query: 60  LGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQ 91
                  + IIDFGLA  +     ++    T 
Sbjct: 149 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 180

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 1e-04
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 3/51 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHV 88
           + ++HS+  ++RD+K DN L+    +   + I DFG+ K      +     
Sbjct: 116 LQFLHSKGIVYRDLKLDNILLD---KDGHIKIADFGMCKENMLGDAKTNTF 163

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.6 bits (84), Expect = 1e-04
 Identities = 16/59 (27%), Positives = 26/59 (44%)

Query: 32  REWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
            + +  + Y+H    +HRD+KP+N L       + + I DFGL+K             T
Sbjct: 114 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 172

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 2e-04
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 3/57 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           ++Y+ S+ F+HRD+   N L+       +V + DFGL++ V          +    R
Sbjct: 113 MEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 166

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 2e-04
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERH 87
           ++++H    I+RDIK +N L+        V + DFGL+K   +  +   +
Sbjct: 142 LEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEFVADETERAY 188

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 3e-04
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTT 93
           ++Y+ S+  IHRD+   N L+      N++ I DFGLA+++     Y++    +  
Sbjct: 148 MEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLP 200

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 3e-04
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQT 92
           + + HS   +HRD+KP N L  +   G  + + DFGLA+          H     
Sbjct: 115 LAFCHSHRVLHRDLKPQNLL--INTEGA-IKLADFGLARAFGVPVRTYTHEVVTL 166

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (81), Expect = 3e-04
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTR 94
           I ++HS   IHRD+KP N ++   K    + I+DFGLA+   +S     +V T+  R
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 185

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (80), Expect = 5e-04
 Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 12/88 (13%)

Query: 10  CLVFPYSYGTKSGEQISTGKEDREWIGR---------IDYIHSRNFIHRDIKPDNFLMGL 60
            LVF +                     +         ++Y+H    +HRD+KP+N L  L
Sbjct: 76  SLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLL--L 133

Query: 61  GKRGNLVYIIDFGLAKNVPSSPSYERHV 88
            + G  + + DFGLAK+  S      H 
Sbjct: 134 DENGV-LKLADFGLAKSFGSPNRAYTHQ 160

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 35.1 bits (80), Expect = 5e-04
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTT 90
           +++ H    IHRD+KP N ++      N V ++DFG+A+ +  S +       
Sbjct: 124 LNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGNSVTQTAA 173

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.9 bits (74), Expect = 0.003
 Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 38  IDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTT 93
           + Y+++  F+HRD+   N ++        V I DFG+ +++  +  Y +       
Sbjct: 146 MAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 198

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.9 bits (74), Expect = 0.004
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 12/80 (15%)

Query: 10  CLVFPYSYGTKSGEQISTGKEDREWIGRI--------DYIHSRNFIHRDIKPDNFLMGLG 61
            LV P+  GT  G+ +   K   + I  +         YIH+   IHRD+KP N  +   
Sbjct: 99  YLVMPF-MGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN-- 155

Query: 62  KRGNLVYIIDFGLAKNVPSS 81
                + I+DFGLA+   S 
Sbjct: 156 -EDCELKILDFGLARQADSE 174

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	99
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.88
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.87
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.87
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.87
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.87
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.87
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.86
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.86
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.85
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.85
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.85
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.85
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.85
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.84
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.84
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.84
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.83
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.83
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.83
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.82
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.82
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.82
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.82
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.82
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.81
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.81
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.81
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.81
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.8
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.8
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.8
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.79
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.78
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.78
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.76
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.76
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.76
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.76
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.76
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.76
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.75
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.74
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.74
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.74
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.73
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.72
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.72
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.72
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.72
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.72
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.72
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.71
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.71
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.71
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.7
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.7
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.68
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.66
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.65
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.65
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.64
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.48
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.27
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	94.14
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	87.21

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.2e-23  Score=126.83  Aligned_cols=90  Identities=23%  Similarity=0.335  Sum_probs=75.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+++|+|.+.+..+.         ++.|++.|+.|||+++++|||++|+|+++.   ....+|++|||+|+
T Consensus        75 ~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~---~~~~~KL~DFG~a~  151 (271)
T d1nvra_          75 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLAT  151 (271)
T ss_dssp             TTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTCE
T ss_pred             CceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEEC---CCCCEEEccchhhe
Confidence            456899999999999999986532         889999999999999999999999999994   45569999999998


Q ss_pred             cCCCCC---Cccceeeccceecccc
Q psy14897         77 NVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                      .+....   .....+||..|.+||+
T Consensus       152 ~~~~~~~~~~~~~~~GT~~Y~APE~  176 (271)
T d1nvra_         152 VFRYNNRERLLNKMCGTLPYVAPEL  176 (271)
T ss_dssp             ECEETTEECCBCCCCSCGGGSCTHH
T ss_pred             eeccCCccccccceeeCcCccCHhH
Confidence            764332   2345689999999985

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=9e-23  Score=128.47  Aligned_cols=92  Identities=25%  Similarity=0.308  Sum_probs=79.6

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ..+|+||||++||+|.+++..+           .++.|++.|+.|||+++++|||++|+|+++........++++|||+|
T Consensus        82 ~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a  161 (335)
T d2ozaa1          82 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA  161 (335)
T ss_dssp             EEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             CEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccccccccccccee
Confidence            4589999999999999998642           27899999999999999999999999999964334557999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +...........+||..|.+||+
T Consensus       162 ~~~~~~~~~~~~~gt~~y~aPE~  184 (335)
T d2ozaa1         162 KETTSHNSLTTPCYTPYYVAPEV  184 (335)
T ss_dssp             EECCCCCCCCCCSCCCSSCCCCC
T ss_pred             eeccCCCccccccCCcccCCcHH
Confidence            98877766677789999999986

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.87  E-value=5.9e-23  Score=128.04  Aligned_cols=93  Identities=20%  Similarity=0.276  Sum_probs=65.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+++||||+++|+|.+++..+.         ++.|++.|+.|+|+++++|||++|+|+++........++++|||+|+
T Consensus        79 ~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~  158 (307)
T d1a06a_          79 GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK  158 (307)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC----
T ss_pred             CCEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeE
Confidence            467899999999999999986532         78999999999999999999999999998533345679999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...........+||..|.+||+
T Consensus       159 ~~~~~~~~~~~~GT~~y~APE~  180 (307)
T d1a06a_         159 MEDPGSVLSTACGTPGYVAPEV  180 (307)
T ss_dssp             --------------CTTSCHHH
T ss_pred             EccCCCeeeeeeeCccccCcHH
Confidence            8766655566789999999985

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.5e-22  Score=126.58  Aligned_cols=90  Identities=26%  Similarity=0.446  Sum_probs=77.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+++||||+.+|+|.+.+....         ++.|++.|+.|+|+++++|||++|+|+++.   ....++++|||+|+
T Consensus        77 ~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~---~~g~vkl~DFG~a~  153 (337)
T d1o6la_          77 HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCK  153 (337)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCB
T ss_pred             ccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEec---CCCCEEEeeccccc
Confidence            457899999999999999886532         789999999999999999999999999994   45679999999998


Q ss_pred             cCCC-CCCccceeeccceecccc
Q psy14897         77 NVPS-SPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~-~~~~~~~~~t~~~~~~~~   98 (99)
                      .... .......+||..|.+||+
T Consensus       154 ~~~~~~~~~~~~~GT~~Y~aPE~  176 (337)
T d1o6la_         154 EGISDGATMKTFCGTPEYLAPEV  176 (337)
T ss_dssp             CSCCTTCCBCCCEECGGGCCGGG
T ss_pred             ccccCCcccccceeCHHHhhhhh
Confidence            7654 334456789999999996

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.4e-22  Score=124.63  Aligned_cols=90  Identities=26%  Similarity=0.407  Sum_probs=76.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      ++..|+||||+.+|+|.+.+..+.        ++.|++.|+.|||+++++|||++|+|+++.   ....++++|||+|+.
T Consensus        89 ~~~~~ivmEy~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~---~~~~vkl~DFG~a~~  165 (293)
T d1yhwa1          89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQ  165 (293)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEE
T ss_pred             CCEEEEEEEecCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEEC---CCCcEeeccchhhee
Confidence            467899999999999998876432        789999999999999999999999999994   455699999999998


Q ss_pred             CCCCC-Cccceeeccceecccc
Q psy14897         78 VPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +.... .....+||..|.+||+
T Consensus       166 ~~~~~~~~~~~~gt~~Y~aPE~  187 (293)
T d1yhwa1         166 ITPEQSKRSTMVGTPYWMAPEV  187 (293)
T ss_dssp             CCSTTCCBCCCCSCGGGCCHHH
T ss_pred             eccccccccccccCCCccChhh
Confidence            75443 3455679999999985

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.7e-22  Score=123.68  Aligned_cols=89  Identities=28%  Similarity=0.382  Sum_probs=75.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+++||||+.+|+|.+.+....         ++.|++.|+.|||+++++|||++|+|+++.   ....+|++|||+|.
T Consensus        78 ~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~---~~~~~kl~DFG~a~  154 (263)
T d2j4za1          78 ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV  154 (263)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCCSCS
T ss_pred             CCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceec---CCCCEeecccceee
Confidence            457899999999999999886432         789999999999999999999999999994   55669999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...... ....+||..|.+||+
T Consensus       155 ~~~~~~-~~~~~Gt~~Y~APE~  175 (263)
T d2j4za1         155 HAPSSR-RTTLCGTLDYLPPEM  175 (263)
T ss_dssp             CCCCCC-CEETTEEGGGCCHHH
T ss_pred             ecCCCc-ccccCCCCcccCHHH
Confidence            765443 355689999999985

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.86  E-value=4.7e-22  Score=122.41  Aligned_cols=90  Identities=23%  Similarity=0.295  Sum_probs=78.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+|+||||+++|+|.+.++.+         .++.|++.|+.|||+++++|+|++|+|+++.   ....++++|||+++
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~---~~~~~kl~DFG~a~  158 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSC  158 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred             CcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEc---CCCCeEEccchhee
Confidence            46789999999999999998643         2889999999999999999999999999994   55669999999999


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+.........+||..|.+||+
T Consensus       159 ~~~~~~~~~~~~gt~~y~~PE~  180 (277)
T d1phka_         159 QLDPGEKLREVCGTPSYLAPEI  180 (277)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHH
T ss_pred             EccCCCceeeeeccCCCCCHHH
Confidence            8876655566788888888874

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.86  E-value=4.7e-22  Score=125.82  Aligned_cols=92  Identities=21%  Similarity=0.377  Sum_probs=78.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++.+++||||+++|+|.+.+...          .++.|++.|+.|||+++++|||++|+|+++... ....++++|||++
T Consensus        95 ~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~-~~~~vkL~DFG~a  173 (350)
T d1koaa2          95 DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLT  173 (350)
T ss_dssp             TTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TSCCEEECCCTTC
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccC-CCCeEEEeecchh
Confidence            46789999999999999988432          278999999999999999999999999998421 2356999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.+.........+||..|.+||+
T Consensus       174 ~~~~~~~~~~~~~gT~~Y~aPEv  196 (350)
T d1koaa2         174 AHLDPKQSVKVTTGTAEFAAPEV  196 (350)
T ss_dssp             EECCTTSCEEEECSCTTTCCHHH
T ss_pred             eecccccccceecCcccccCHHH
Confidence            98877766677889999999985

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=7.8e-22  Score=121.05  Aligned_cols=89  Identities=22%  Similarity=0.210  Sum_probs=74.1

Q ss_pred             CCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCC--eeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRN--FIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~--i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ..+++||||+++|+|.+++...         .++.|++.|+.|||+++  ++|||+||+|+++.  .....+|++|||+|
T Consensus        85 ~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~--~~~~~~Kl~DFGla  162 (270)
T d1t4ha_          85 KCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLA  162 (270)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGG
T ss_pred             CEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee--CCCCCEEEeecCcc
Confidence            4579999999999999988653         27899999999999998  99999999999994  23456999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +..... .....+||..|.+||+
T Consensus       163 ~~~~~~-~~~~~~GT~~Y~aPE~  184 (270)
T d1t4ha_         163 TLKRAS-FAKAVIGTPEFMAPEM  184 (270)
T ss_dssp             GGCCTT-SBEESCSSCCCCCGGG
T ss_pred             eeccCC-ccCCcccCccccCHHH
Confidence            864433 3356689999999986

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.85  E-value=1.4e-21  Score=123.78  Aligned_cols=92  Identities=23%  Similarity=0.338  Sum_probs=77.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++.+++||||+++|+|.+.+...          .++.|++.|+.|||+++++|||++|+|+++... ....++++|||+|
T Consensus        98 ~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~-~~~~vkL~DFGla  176 (352)
T d1koba_          98 KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK-KASSVKIIDFGLA  176 (352)
T ss_dssp             SSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TCCCEEECCCTTC
T ss_pred             CCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccccccccccccc-CCCeEEEeecccc
Confidence            46789999999999998876532          278999999999999999999999999998421 3456999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ..+.........++|..|.+||+
T Consensus       177 ~~~~~~~~~~~~~gt~~y~aPE~  199 (352)
T d1koba_         177 TKLNPDEIVKVTTATAEFAAPEI  199 (352)
T ss_dssp             EECCTTSCEEEECSSGGGCCHHH
T ss_pred             eecCCCCceeeccCcccccCHHH
Confidence            99877766667788999999985

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=5.1e-22  Score=122.85  Aligned_cols=90  Identities=23%  Similarity=0.365  Sum_probs=73.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+|+||||+++|+|.+.+....         ++.|++.|+.|+|+++++|||++|+|+++.   ....+++.|||+|+
T Consensus        80 ~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~---~~~~vkl~DFG~a~  156 (288)
T d1uu3a_          80 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAK  156 (288)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             CCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccC---CCceEEecccccce
Confidence            467899999999999999876432         789999999999999999999999999994   55669999999999


Q ss_pred             cCCCCC---Cccceeeccceecccc
Q psy14897         77 NVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                      .+....   .....+||..|.+||+
T Consensus       157 ~~~~~~~~~~~~~~~GT~~Y~APE~  181 (288)
T d1uu3a_         157 VLSPESKQARANSFVGTAQYVSPEL  181 (288)
T ss_dssp             ECC----------CCCCGGGCCHHH
T ss_pred             ecccCCcccccccccCCccccCcee
Confidence            875432   2234579999999985

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.85  E-value=8.6e-22  Score=125.14  Aligned_cols=89  Identities=22%  Similarity=0.275  Sum_probs=75.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+|+||||+.+|+|.+.+..+.         ++.|++.|+.|+|+++++|||+||+|+++.   ....+|++|||+|+
T Consensus        79 ~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~---~~g~iKl~DFGla~  155 (364)
T d1omwa3          79 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLAC  155 (364)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---SSSCEEECCCTTCE
T ss_pred             CCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEc---CCCcEEEeeeceee
Confidence            457899999999999999886432         789999999999999999999999999994   55669999999999


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+.... ....+||..|.+||+
T Consensus       156 ~~~~~~-~~~~~GT~~y~APE~  176 (364)
T d1omwa3         156 DFSKKK-PHASVGTHGYMAPEV  176 (364)
T ss_dssp             ECSSSC-CCSCCSCGGGCCHHH
T ss_pred             ecCCCc-ccccccccccchhHH
Confidence            775543 345689999999985

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=9.6e-23  Score=127.65  Aligned_cols=89  Identities=19%  Similarity=0.298  Sum_probs=73.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+.+++||||+.+|+|.+++..+         .++.|++.|+.|+|+ ++++|||+||+|+++.   ....+|++|||+|
T Consensus        76 ~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~---~~~~vkl~DFGla  152 (322)
T d1s9ja_          76 DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVS  152 (322)
T ss_dssp             SSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC---TTCCEEECCCCCC
T ss_pred             CCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeEC---CCCCEEEeeCCCc
Confidence            45789999999999999988643         278999999999997 5899999999999994   5567999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.+.... ....+||.+|.+||+
T Consensus       153 ~~~~~~~-~~~~~GT~~Y~APEv  174 (322)
T d1s9ja_         153 GQLIDSM-ANSFVGTRSYMSPER  174 (322)
T ss_dssp             HHHHHHT-C---CCSSCCCCHHH
T ss_pred             cccCCCc-cccccCCccccCchH
Confidence            8764332 245689999999985

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2e-21  Score=121.76  Aligned_cols=91  Identities=21%  Similarity=0.294  Sum_probs=74.9

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccc--------------------------------hHHHHHHHHHHHHhhCCeeecCcC
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTG--------------------------------KEDREWIGRIDYIHSRNFIHRDIK   52 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~--------------------------------~~~~~i~~~l~~lh~~~i~h~~l~   52 (99)
                      ..+.+++||||+++|+|.++++.+                                .++.|++.|+.|||+++++|||+|
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlK  191 (325)
T d1rjba_         112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA  191 (325)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred             eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCc
Confidence            346789999999999999988542                                178999999999999999999999


Q ss_pred             CCcEEEeeCCCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         53 PDNFLMGLGKRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        53 ~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      |+|+++.   ....+|++|||+|+........   ....+|..|.+||+
T Consensus       192 p~Nill~---~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~  237 (325)
T d1rjba_         192 ARNVLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPES  237 (325)
T ss_dssp             GGGEEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHH
T ss_pred             hhccccc---cCCeEEEeeccccccccCCCceeeeccccCCCccCChHH
Confidence            9999995   5567999999999876544322   24467888899884

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=7.4e-22  Score=121.46  Aligned_cols=90  Identities=23%  Similarity=0.330  Sum_probs=70.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +..+++||||+++|+|.+++...+          ++.|++.|+.|||+++++|+|++++|++++   ....+|++|||+|
T Consensus        75 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~---~~~~~Kl~DFGla  151 (276)
T d1uwha_          75 APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLA  151 (276)
T ss_dssp             SSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---TTSSEEECCCCCS
T ss_pred             ccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEc---CCCCEEEccccce
Confidence            356899999999999999885322          789999999999999999999999999995   4566999999999


Q ss_pred             ecCCCCC---Cccceeeccceecccc
Q psy14897         76 KNVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                      +......   ......+|..|.+||+
T Consensus       152 ~~~~~~~~~~~~~~~~gt~~y~APE~  177 (276)
T d1uwha_         152 TVKSRWSGSHQFEQLSGSILWMAPEV  177 (276)
T ss_dssp             CC------------CCCCGGGCCHHH
T ss_pred             eeccccCCcccccccccCcccCCHHH
Confidence            8764332   2244578888999985

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=2.4e-21  Score=121.13  Aligned_cols=88  Identities=26%  Similarity=0.396  Sum_probs=75.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+++||||+.||++...+...         .++.|++.|+.|+|+++++|||+||+|+++.   ....+|++|||+|+
T Consensus        76 ~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~---~~g~vkL~DFG~a~  152 (316)
T d1fota_          76 AQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD---KNGHIKITDFGFAK  152 (316)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC---TTSCEEECCCSSCE
T ss_pred             CCeeeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEc---CCCCEEEecCccce
Confidence            46789999999999998887643         2789999999999999999999999999994   55679999999999


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+....  ...+||..|.+||+
T Consensus       153 ~~~~~~--~~~~Gt~~Y~APE~  172 (316)
T d1fota_         153 YVPDVT--YTLCGTPDYIAPEV  172 (316)
T ss_dssp             ECSSCB--CCCCSCTTTCCHHH
T ss_pred             Eecccc--ccccCcccccCHHH
Confidence            875543  45789999999985

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=5.7e-22  Score=122.61  Aligned_cols=90  Identities=16%  Similarity=0.279  Sum_probs=73.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++.+++||||+.+|+|.+.+...          .++.|++.|+.|||+++++|||++|+|+++.   ....+|++|||+|
T Consensus        81 ~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~---~~~~~Kl~DFG~a  157 (288)
T d2jfla1          81 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVS  157 (288)
T ss_dssp             TTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             CCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeEC---CCCCEEEEechhh
Confidence            46789999999999999886432          2789999999999999999999999999994   4556999999999


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      +...... .....+||..|.+||+
T Consensus       158 ~~~~~~~~~~~~~~Gt~~y~APE~  181 (288)
T d2jfla1         158 AKNTRTIQRRDSFIGTPYWMAPEV  181 (288)
T ss_dssp             EECHHHHHHHTCCCSCCTTCCHHH
T ss_pred             hccCCCcccccccccccccCCHHH
Confidence            8764322 2234678999999985

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=6.6e-21  Score=117.83  Aligned_cols=93  Identities=22%  Similarity=0.300  Sum_probs=77.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCC-CCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGK-RGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~-~~~~~~l~d~g~a   75 (99)
                      ++.+++||||+++|+|.+.+..+.         ++.|++.|+.|||+++++|||++|+|+++.... ....+++.|||++
T Consensus        85 ~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a  164 (293)
T d1jksa_          85 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  164 (293)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             CCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhh
Confidence            467899999999999999886532         789999999999999999999999999985222 1235899999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ..+..........+|..|.+||+
T Consensus       165 ~~~~~~~~~~~~~~t~~y~APE~  187 (293)
T d1jksa_         165 HKIDFGNEFKNIFGTPEFVAPEI  187 (293)
T ss_dssp             EECTTSCBCSCCCCCGGGCCHHH
T ss_pred             hhcCCCccccccCCCCcccCHHH
Confidence            98876666666788889999985

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=4.8e-21  Score=118.60  Aligned_cols=90  Identities=19%  Similarity=0.259  Sum_probs=68.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      +..+++||||+++|+|.+++..+                         .++.|++.|+.|||+++++|||+||+|+++. 
T Consensus        90 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~-  168 (299)
T d1ywna1          90 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-  168 (299)
T ss_dssp             TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-
T ss_pred             CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeEC-
Confidence            35689999999999999988532                         2689999999999999999999999999994 


Q ss_pred             CCCCCeEEEeeccceecCCCCCC---ccceeeccceecccc
Q psy14897         61 GKRGNLVYIIDFGLAKNVPSSPS---YERHVTTQTTRIGRI   98 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~~~~~~~---~~~~~~t~~~~~~~~   98 (99)
                        ....+|++|||+|+.......   .....||..|.+||+
T Consensus       169 --~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~  207 (299)
T d1ywna1         169 --EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET  207 (299)
T ss_dssp             --GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHH
T ss_pred             --CCCcEEEccCcchhhccccccccccCceeeCccccchhH
Confidence              455699999999987644332   234578888999984

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.3e-21  Score=120.05  Aligned_cols=90  Identities=24%  Similarity=0.289  Sum_probs=63.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc-------------chHHHHHHHHHHHHhhCC-----eeecCcCCCcEEEeeCCCCCeE
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST-------------GKEDREWIGRIDYIHSRN-----FIHRDIKPDNFLMGLGKRGNLV   67 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~-------------~~~~~~i~~~l~~lh~~~-----i~h~~l~~~~~l~~~~~~~~~~   67 (99)
                      ++.+|+||||+++|+|.+.+..             ..++.|++.|+.|+|+++     ++|||++|+|+++.   ....+
T Consensus        77 ~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~---~~~~v  153 (269)
T d2java1          77 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD---GKQNV  153 (269)
T ss_dssp             --CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEEC---TTSCE
T ss_pred             CCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcC---CCCcE
Confidence            4568999999999999998753             127899999999999865     99999999999994   45679


Q ss_pred             EEeeccceecCCCCCC-ccceeeccceecccc
Q psy14897         68 YIIDFGLAKNVPSSPS-YERHVTTQTTRIGRI   98 (99)
Q Consensus        68 ~l~d~g~a~~~~~~~~-~~~~~~t~~~~~~~~   98 (99)
                      |++|||+|+.+..... ....++|..|.+||+
T Consensus       154 kl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~  185 (269)
T d2java1         154 KLGDFGLARILNHDTSFAKAFVGTPYYMSPEQ  185 (269)
T ss_dssp             EECCHHHHHHC-----------CCCSCCCHHH
T ss_pred             EEeeccceeecccCCCccccCCCCcccCCHHH
Confidence            9999999998765432 245678999999985

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.1e-20  Score=118.30  Aligned_cols=90  Identities=23%  Similarity=0.316  Sum_probs=75.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+|+||||+++|+|.+++....         ++.|++.|+.|||+++++|||++|+|+++.   ....+++.|||+++
T Consensus        75 ~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~---~~~~~kl~DFG~a~  151 (320)
T d1xjda_          75 KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---KDGHIKIADFGMCK  151 (320)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCB
T ss_pred             CCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeec---CCCceeccccchhh
Confidence            467999999999999999886432         789999999999999999999999999994   55679999999998


Q ss_pred             cCCCCC-Cccceeeccceecccc
Q psy14897         77 NVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ...... .....+||..|.+||+
T Consensus       152 ~~~~~~~~~~~~~gt~~y~aPE~  174 (320)
T d1xjda_         152 ENMLGDAKTNTFCGTPDYIAPEI  174 (320)
T ss_dssp             CCCCTTCCBCCCCSCGGGCCHHH
T ss_pred             hcccccccccccCCCCCcCCHHH
Confidence            765433 3344678999999985

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.1e-20  Score=118.28  Aligned_cols=92  Identities=22%  Similarity=0.372  Sum_probs=76.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++.+|+||||+.+|+|.+.+..+.          ++.|++.|+.|||+++++|||++|+|+++..+ ....+++.|||++
T Consensus        73 ~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~-~~~~ikl~DFG~~  151 (321)
T d1tkia_          73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQA  151 (321)
T ss_dssp             TTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCTTC
T ss_pred             CCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCC-CceEEEEcccchh
Confidence            467899999999999999886432          78999999999999999999999999998421 3346899999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +...........++|..|.+||+
T Consensus       152 ~~~~~~~~~~~~~~t~~y~ape~  174 (321)
T d1tkia_         152 RQLKPGDNFRLLFTAPEYYAPEV  174 (321)
T ss_dssp             EECCTTCEEEEEESCGGGSCHHH
T ss_pred             hccccCCcccccccccccccchh
Confidence            98876665566677888888764

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.82  E-value=3.3e-21  Score=120.15  Aligned_cols=87  Identities=28%  Similarity=0.378  Sum_probs=73.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+++||||+.+|++...+..+         .++.|++.|+.|||+++++|||++|+|+++.   ....++++|||+|.
T Consensus        87 ~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~---~~~~~Kl~DFG~a~  163 (309)
T d1u5ra_          87 EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSAS  163 (309)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---TTTEEEECCCTTCB
T ss_pred             CCEEEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEC---CCCCEEEeeccccc
Confidence            45789999999999887665432         2889999999999999999999999999995   55679999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .....   ...+||..|.+||+
T Consensus       164 ~~~~~---~~~~GT~~Y~APE~  182 (309)
T d1u5ra_         164 IMAPA---NSFVGTPYWMAPEV  182 (309)
T ss_dssp             SSSSB---CCCCSCGGGCCHHH
T ss_pred             ccCCC---CccccCccccCHHH
Confidence            76543   34689999999985

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=1.5e-20  Score=118.84  Aligned_cols=88  Identities=24%  Similarity=0.368  Sum_probs=75.4

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ....++||||+.+|+|.+.+...         .++.|++.||.|||+++++|||++|+|+++.   ....++++|||+|+
T Consensus       113 ~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~---~~g~ikL~DFG~a~  189 (350)
T d1rdqe_         113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAK  189 (350)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             ccccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccC---CCCCEEeeeceeee
Confidence            45689999999999999988643         2889999999999999999999999999994   45679999999999


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      .+....  ...+||..|.+||+
T Consensus       190 ~~~~~~--~~~~Gt~~Y~APE~  209 (350)
T d1rdqe_         190 RVKGRT--WTLCGTPEALAPEI  209 (350)
T ss_dssp             ECSSCB--CCCEECGGGCCHHH
T ss_pred             eccccc--ccccCccccCCHHH
Confidence            876443  45789999999985

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.8e-20  Score=114.04  Aligned_cols=90  Identities=20%  Similarity=0.250  Sum_probs=73.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ++..++||||+.+|+|.+.+...           .++.|++.|+.|+|+++++|+|++++|+++.   ....+|++|||+
T Consensus        79 ~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~---~~~~~Kl~DFGl  155 (272)
T d1qpca_          79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGL  155 (272)
T ss_dssp             SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTT
T ss_pred             cCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeee---cccceeeccccc
Confidence            46789999999999998866432           2789999999999999999999999999994   556799999999


Q ss_pred             eecCCCCCC--ccceeeccceecccc
Q psy14897         75 AKNVPSSPS--YERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~--~~~~~~t~~~~~~~~   98 (99)
                      |+.+.....  .....+|..|.+||+
T Consensus       156 a~~~~~~~~~~~~~~~gt~~y~APE~  181 (272)
T d1qpca_         156 ARLIEDNEYTAREGAKFPIKWTAPEA  181 (272)
T ss_dssp             CEECSSSCEECCTTCCCCTTTSCHHH
T ss_pred             eEEccCCccccccccCCcccccChHH
Confidence            998754432  233456778888874

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1e-20  Score=115.52  Aligned_cols=90  Identities=19%  Similarity=0.292  Sum_probs=65.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch----------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK----------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~----------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..++||||+.+|+|.+++....          ++.|++.|+.|+|+++++|+|++++|++++   ....+|++|||++
T Consensus        72 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~---~~~~~Kl~DFGla  148 (263)
T d1sm2a_          72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMT  148 (263)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEEC---GGGCEEECSCC--
T ss_pred             CCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeec---CCCCeEecccchh
Confidence            467999999999999999875422          789999999999999999999999999995   4556999999999


Q ss_pred             ecCCCCCCc--cceeeccceecccc
Q psy14897         76 KNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      +........  ....+|..|.+||+
T Consensus       149 ~~~~~~~~~~~~~~~gt~~y~aPE~  173 (263)
T d1sm2a_         149 RFVLDDQYTSSTGTKFPVKWASPEV  173 (263)
T ss_dssp             ----------------CTTSCCHHH
T ss_pred             eeccCCCceeecceecCcccCChHH
Confidence            876544322  23467788889885

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=1.8e-20  Score=115.69  Aligned_cols=91  Identities=19%  Similarity=0.273  Sum_probs=72.5

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      .++..++||||+++|+|.+.+...           .++.|++.|+.|||+++++|||+||+|++++   ....+|++|||
T Consensus        84 ~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~---~~~~~Kl~DFG  160 (287)
T d1opja_          84 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG  160 (287)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCC
T ss_pred             eCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEEC---CCCcEEEcccc
Confidence            346789999999999999988532           2679999999999999999999999999995   44569999999


Q ss_pred             ceecCCCCCCc--cceeeccceecccc
Q psy14897         74 LAKNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      +|+........  ....++..|.+||+
T Consensus       161 ~a~~~~~~~~~~~~~~~g~~~y~aPE~  187 (287)
T d1opja_         161 LSRLMTGDTYTAHAGAKFPIKWTAPES  187 (287)
T ss_dssp             CTTTCCSSSSEEETTEEECGGGCCHHH
T ss_pred             ceeecCCCCceeeccccccccccChHH
Confidence            99876544322  22345667778874

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.81  E-value=7.1e-20  Score=114.46  Aligned_cols=91  Identities=26%  Similarity=0.372  Sum_probs=77.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      ...+++||||+.+|+|....+.      +.++.|++.||.|||+++++|||++|+|+++.  ..+..+++.|||+|+.+.
T Consensus       104 ~~~~~~v~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~--~~~~~vkl~DFG~a~~~~  181 (328)
T d3bqca1         104 SRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH  181 (328)
T ss_dssp             TCSEEEEEECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTTEEEECCGGGCEECC
T ss_pred             CCceeEEEeecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEc--CCCCeeeecccccceecc
Confidence            4568999999999999886543      33889999999999999999999999999995  345568999999999887


Q ss_pred             CCCCccceeeccceecccc
Q psy14897         80 SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        80 ~~~~~~~~~~t~~~~~~~~   98 (99)
                      ........++|..|.+||.
T Consensus       182 ~~~~~~~~~~t~~y~aPE~  200 (328)
T d3bqca1         182 PGQEYNVRVASRYFKGPEL  200 (328)
T ss_dssp             TTCCCCSCCSCGGGCCHHH
T ss_pred             CCCcccccccCccccCccc
Confidence            6666667788999999985

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=2e-20  Score=116.10  Aligned_cols=91  Identities=16%  Similarity=0.231  Sum_probs=63.2

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .++.+++||||+++|+|.+++...          .++.|++.|+.|||+++++|||++++|++++   ....+|++|||+
T Consensus        98 ~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~---~~~~~Kl~DFGl  174 (299)
T d1jpaa_          98 KSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVN---SNLVCKVSDFGL  174 (299)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCC--
T ss_pred             eCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEEC---CCCcEEECCccc
Confidence            346789999999999999877642          2789999999999999999999999999994   556799999999


Q ss_pred             eecCCCCCCcc------ceeeccceecccc
Q psy14897         75 AKNVPSSPSYE------RHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~~------~~~~t~~~~~~~~   98 (99)
                      ++.+.......      ...+|..|.+||+
T Consensus       175 a~~~~~~~~~~~~~~~~~~~~t~~y~aPE~  204 (299)
T d1jpaa_         175 SRFLEDDTSDPTYTSALGGKIPIRWTAPEA  204 (299)
T ss_dssp             ---------------------CGGGSCHHH
T ss_pred             ceEccCCCCcceeeecccccCCccccCHHH
Confidence            98765432211      1234566777764

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.4e-20  Score=115.41  Aligned_cols=90  Identities=26%  Similarity=0.407  Sum_probs=74.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++.+++||||+.++++......+         .++.|++.|+.|||+++++|||+||+|+++.   ....+|++|||.++
T Consensus        72 ~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~---~~~~~KL~DFG~a~  148 (299)
T d1ua2a_          72 KSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD---ENGVLKLADFGLAK  148 (299)
T ss_dssp             TTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECCCGGGS
T ss_pred             CCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEec---CCCccccccCcccc
Confidence            46789999999998776655432         2789999999999999999999999999994   55679999999998


Q ss_pred             cCCCCC-Cccceeeccceecccc
Q psy14897         77 NVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ...... .....++|..|.+||+
T Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~  171 (299)
T d1ua2a_         149 SFGSPNRAYTHQVVTRWYRAPEL  171 (299)
T ss_dssp             TTTSCCCCCCCSCCCCTTCCHHH
T ss_pred             ccCCCcccccceecChhhccHHH
Confidence            775543 3345678999999985

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=7.6e-20  Score=112.83  Aligned_cols=90  Identities=21%  Similarity=0.253  Sum_probs=72.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++.+++||||+++|+|.+++...          .++.|++.|+.|+|+++++|+|++++|+++.   ....+|++|||++
T Consensus        80 ~~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~---~~~~~Kl~DFGla  156 (285)
T d1u59a_          80 AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLS  156 (285)
T ss_dssp             SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---ETTEEEECCCTTC
T ss_pred             cCeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeec---cCCceeeccchhh
Confidence            45789999999999999987532          2789999999999999999999999999995   4567999999999


Q ss_pred             ecCCCCCCc----cceeeccceecccc
Q psy14897         76 KNVPSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      +.+......    ....+|..|.+||+
T Consensus       157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~  183 (285)
T d1u59a_         157 KALGADDSYYTARSAGKWPLKWYAPEC  183 (285)
T ss_dssp             EECTTCSCEECCCCSSCCCGGGCCHHH
T ss_pred             hcccccccccccccccccCccccChHH
Confidence            987554322    22345667778874

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.4e-19  Score=111.19  Aligned_cols=90  Identities=19%  Similarity=0.238  Sum_probs=72.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ++..++||||+++|+|.+++....         ++.|++.|+.|+|+++++|||++|+|+++.   ....++++|||+++
T Consensus        79 ~~~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~---~~~~~kl~DFGla~  155 (277)
T d1xbba_          79 AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSK  155 (277)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCCTTCE
T ss_pred             cCCEEEEEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhccc---ccCcccccchhhhh
Confidence            456899999999999999886532         789999999999999999999999999995   45679999999999


Q ss_pred             cCCCCCCc----cceeeccceecccc
Q psy14897         77 NVPSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      .+......    ....+|..|.+||+
T Consensus       156 ~~~~~~~~~~~~~~~~gt~~y~APE~  181 (277)
T d1xbba_         156 ALRADENYYKAQTHGKWPVKWYAPEC  181 (277)
T ss_dssp             ECCTTCSEEEC----CCCGGGCCHHH
T ss_pred             hccccccccccccccCCCceecCchh
Confidence            87554322    22346677888874

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.8e-19  Score=110.38  Aligned_cols=90  Identities=18%  Similarity=0.183  Sum_probs=73.2

Q ss_pred             CCCeEEEEEeeCC-CCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYG-TKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~-g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+ +++.+.++.+         .++.|++.|+.|+|+++++|||++|+|+++.  .+...+++.|||+|
T Consensus        81 ~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~--~~~~~vkl~DFG~a  158 (273)
T d1xwsa_          81 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDFGSG  158 (273)
T ss_dssp             SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCCTTC
T ss_pred             CCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEe--cCCCeEEECccccc
Confidence            4578999999986 5666666532         2789999999999999999999999999995  34467999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +..... .....+||..|.+||+
T Consensus       159 ~~~~~~-~~~~~~GT~~y~aPE~  180 (273)
T d1xwsa_         159 ALLKDT-VYTDFDGTRVYSPPEW  180 (273)
T ss_dssp             EECCSS-CBCCCCSCGGGSCHHH
T ss_pred             eecccc-cccccccCCCcCCHHH
Confidence            875443 3456789999999985

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3.4e-19  Score=108.55  Aligned_cols=90  Identities=17%  Similarity=0.226  Sum_probs=73.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++.+++||||+++|++...+...          .++.|++.|+.|||+++++|+|+++.|++++   ....+|++|||++
T Consensus        71 ~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~---~~~~~kl~DfG~a  147 (258)
T d1k2pa_          71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLS  147 (258)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEEC---TTCCEEECCCSSC
T ss_pred             CCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEc---CCCcEEECcchhh
Confidence            46899999999999998886432          2789999999999999999999999999994   5567999999999


Q ss_pred             ecCCCCCCc--cceeeccceecccc
Q psy14897         76 KNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      +.+......  ....+|..|.+||+
T Consensus       148 ~~~~~~~~~~~~~~~~t~~y~aPE~  172 (258)
T d1k2pa_         148 RYVLDDEYTSSVGSKFPVRWSPPEV  172 (258)
T ss_dssp             CBCSSSSCCCCCCSCCCGGGCCHHH
T ss_pred             eeccCCCceeecccCCCCCcCCcHH
Confidence            876544322  23457778888885

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.76  E-value=1.8e-19  Score=110.46  Aligned_cols=88  Identities=23%  Similarity=0.376  Sum_probs=66.0

Q ss_pred             CeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          8 QSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ..|+||||+++|+|.+.+...         .++.|++.|+.|+|+++++|+|+||+|+++.   .....++.|||.+...
T Consensus        85 ~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~---~~~~~~l~d~~~~~~~  161 (277)
T d1o6ya_          85 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAI  161 (277)
T ss_dssp             EEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---TTSCEEECCCTTCEEC
T ss_pred             eEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccC---ccccceeehhhhhhhh
Confidence            478999999999999887543         2889999999999999999999999999995   4556899999988765


Q ss_pred             CCCC----Cccceeeccceecccc
Q psy14897         79 PSSP----SYERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~----~~~~~~~t~~~~~~~~   98 (99)
                      ....    .....+||..|.+||+
T Consensus       162 ~~~~~~~~~~~~~~Gt~~Y~aPE~  185 (277)
T d1o6ya_         162 ADSGNSVTQTAAVIGTAQYLSPEQ  185 (277)
T ss_dssp             C----------------TTCCHHH
T ss_pred             ccccccccccccccCcccccCHHH
Confidence            4332    2344578999999985

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.1e-19  Score=110.82  Aligned_cols=91  Identities=16%  Similarity=0.259  Sum_probs=67.8

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecc
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFG   73 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g   73 (99)
                      .+++.++||||+++|++...+...           .++.|++.|+.|||+++++|+|++++|++++   ....++++|||
T Consensus        82 ~~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~---~~~~~kl~DfG  158 (285)
T d1fmka3          82 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFG  158 (285)
T ss_dssp             CSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCC
T ss_pred             ecCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEEC---CCCcEEEcccc
Confidence            346789999999999998877532           2789999999999999999999999999995   44569999999


Q ss_pred             ceecCCCCC--Cccceeeccceecccc
Q psy14897         74 LAKNVPSSP--SYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~--~~~~~~~t~~~~~~~~   98 (99)
                      +++.+....  ......+|..|.+||+
T Consensus       159 la~~~~~~~~~~~~~~~gt~~y~aPE~  185 (285)
T d1fmka3         159 LARLIEDNEYTARQGAKFPIKWTAPEA  185 (285)
T ss_dssp             TTC--------------CCGGGSCHHH
T ss_pred             hhhhccCCCceeeccccccccccChHH
Confidence            998764333  2233457778888874

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2e-19  Score=110.18  Aligned_cols=91  Identities=18%  Similarity=0.246  Sum_probs=62.8

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      .++.+++||||+.+|++.+++...          .++.|++.|+.|+|+++++|+|++++|+++.   ....+|++|||+
T Consensus        78 ~~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~---~~~~~Kl~DfG~  154 (273)
T d1mp8a_          78 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGL  154 (273)
T ss_dssp             CSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECC---
T ss_pred             ecCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeec---CCCcEEEccchh
Confidence            356789999999999998876432          2789999999999999999999999999995   445699999999


Q ss_pred             eecCCCCCCc--cceeeccceecccc
Q psy14897         75 AKNVPSSPSY--ERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~--~~~~~t~~~~~~~~   98 (99)
                      ++.+......  ....+|..|.+||.
T Consensus       155 a~~~~~~~~~~~~~~~gt~~y~apE~  180 (273)
T d1mp8a_         155 SRYMEDSTYYKASKGKLPIKWMAPES  180 (273)
T ss_dssp             ----------------CCGGGCCHHH
T ss_pred             heeccCCcceeccceecCcccchhhH
Confidence            9876543322  33456777888874

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=3.8e-19  Score=110.40  Aligned_cols=88  Identities=22%  Similarity=0.211  Sum_probs=71.7

Q ss_pred             CeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhh--------CCeeecCcCCCcEEEeeCCCCCeEEEee
Q psy14897          8 QSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHS--------RNFIHRDIKPDNFLMGLGKRGNLVYIID   71 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~--------~~i~h~~l~~~~~l~~~~~~~~~~~l~d   71 (99)
                      .+++||||+++|+|.++++...        ++.|++.++.|+|+        ++++|+|++|+|+++.   ....+|++|
T Consensus        75 ~~~lv~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~---~~~~~Kl~D  151 (303)
T d1vjya_          75 QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTCCIAD  151 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEEC---TTSCEEECC
T ss_pred             EEEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEc---CCCCeEEEe
Confidence            5799999999999999997533        78999999999996        5999999999999994   556799999


Q ss_pred             ccceecCCCCC-----Cccceeeccceecccc
Q psy14897         72 FGLAKNVPSSP-----SYERHVTTQTTRIGRI   98 (99)
Q Consensus        72 ~g~a~~~~~~~-----~~~~~~~t~~~~~~~~   98 (99)
                      ||+++......     .....+||..|.+||+
T Consensus       152 FGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  183 (303)
T d1vjya_         152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV  183 (303)
T ss_dssp             CTTCEEEETTTTEECC----CCSCGGGCCHHH
T ss_pred             cCccccccCCCcceeccccceecccCcCChhh
Confidence            99998764432     1234578999999985

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=4.2e-19  Score=111.95  Aligned_cols=89  Identities=25%  Similarity=0.295  Sum_probs=70.1

Q ss_pred             CeEEEEEeeCCCCchhhhc---c---------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          8 QSCLVFPYSYGTKSGEQIS---T---------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~---~---------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+++||||+.++.+.....   .         +.++.|++.|+.|||+++++|||+||+|+++.  ..+..+++.|||++
T Consensus        93 ~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~--~~~~~~kl~DFG~a  170 (350)
T d1q5ka_          93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSA  170 (350)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC--TTTCCEEECCCTTC
T ss_pred             EEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEe--cCCCceeEecccch
Confidence            4789999998764333221   1         23789999999999999999999999999995  33456899999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +.+.........++|..|.+||.
T Consensus       171 ~~~~~~~~~~~~~gt~~y~aPE~  193 (350)
T d1q5ka_         171 KQLVRGEPNVSYICSRYYRAPEL  193 (350)
T ss_dssp             EECCTTSCCCSCCSCTTSCCHHH
T ss_pred             hhccCCcccccccccccccChHH
Confidence            98876665666788888888874

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=4.7e-19  Score=109.00  Aligned_cols=91  Identities=15%  Similarity=0.242  Sum_probs=66.7

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccc
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGL   74 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~   74 (99)
                      ..+..++||||+.+|++.+.+...          .++.|++.|+.|+|+++++|+|++|.|+++.   ....+|++|||+
T Consensus        80 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~---~~~~~Kl~DFGl  156 (283)
T d1mqba_          80 KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN---SNLVCKVSDFGL  156 (283)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCCCC
T ss_pred             cCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEEC---CCCeEEEcccch
Confidence            346789999999999988876532          2789999999999999999999999999994   556799999999


Q ss_pred             eecCCCCCCc----cceeeccceecccc
Q psy14897         75 AKNVPSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        75 a~~~~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      ++.+......    ....+|..|.+||+
T Consensus       157 a~~~~~~~~~~~~~~~~~gt~~Y~APE~  184 (283)
T d1mqba_         157 SRVLEDDPEATYTTSGGKIPIRWTAPEA  184 (283)
T ss_dssp             -----------------CCCGGGSCHHH
T ss_pred             hhcccCCCccceEeccCCCCccccCHHH
Confidence            9876543321    22346777888884

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=5.5e-19  Score=109.85  Aligned_cols=90  Identities=19%  Similarity=0.224  Sum_probs=72.2

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGL   60 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~   60 (99)
                      .+.+++||||+++|+|.+++..+                         .++.|++.|+.|+|+++++|+|+++.|+++. 
T Consensus        83 ~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~-  161 (309)
T d1fvra_          83 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG-  161 (309)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-
T ss_pred             CCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEc-
Confidence            45789999999999999988532                         2789999999999999999999999999995 


Q ss_pred             CCCCCeEEEeeccceecCCCCCCccceeeccceecccc
Q psy14897         61 GKRGNLVYIIDFGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        61 ~~~~~~~~l~d~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                        ....+|+.|||+++............+|..|.+||.
T Consensus       162 --~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~  197 (309)
T d1fvra_         162 --ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES  197 (309)
T ss_dssp             --GGGCEEECCTTCEESSCEECCC----CCTTTCCHHH
T ss_pred             --CCCceEEccccccccccccccccceecCCcccchHH
Confidence              455699999999987655544445567888888874

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=8e-19  Score=108.60  Aligned_cols=89  Identities=25%  Similarity=0.312  Sum_probs=73.3

Q ss_pred             CCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ...+++|||+.++.+......          ..++.|++.|+.|||+++++|||+||+|+++.   ....+++.|||+++
T Consensus        88 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~---~~~~~kl~dfg~~~  164 (305)
T d1blxa_          88 TKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGLAR  164 (305)
T ss_dssp             EEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECSCCSCC
T ss_pred             ceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEc---CCCCeeecchhhhh
Confidence            468999999998766443321          23789999999999999999999999999994   55679999999998


Q ss_pred             cCCCCCCccceeeccceecccc
Q psy14897         77 NVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ...........+||..|.+||+
T Consensus       165 ~~~~~~~~~~~~gT~~Y~APE~  186 (305)
T d1blxa_         165 IYSFQMALTSVVVTLWYRAPEV  186 (305)
T ss_dssp             CCCGGGGGCCCCCCCTTCCHHH
T ss_pred             hhcccccCCCcccChhhcCcch
Confidence            7766655567789999999985

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.9e-18  Score=107.03  Aligned_cols=91  Identities=19%  Similarity=0.269  Sum_probs=73.1

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccc-------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEe
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTG-------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMG   59 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~-------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~   59 (99)
                      .++.+++||||+++|+|.+++..+                         .++.|++.|+.|+|+++++|||++++|+++.
T Consensus        90 ~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~  169 (299)
T d1fgka_          90 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT  169 (299)
T ss_dssp             SSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             cCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeec
Confidence            356799999999999999988522                         2789999999999999999999999999994


Q ss_pred             eCCCCCeEEEeeccceecCCCCC---Cccceeeccceecccc
Q psy14897         60 LGKRGNLVYIIDFGLAKNVPSSP---SYERHVTTQTTRIGRI   98 (99)
Q Consensus        60 ~~~~~~~~~l~d~g~a~~~~~~~---~~~~~~~t~~~~~~~~   98 (99)
                         ....+|+.|||+++......   ......++..|.+||.
T Consensus       170 ---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  208 (299)
T d1fgka_         170 ---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEA  208 (299)
T ss_dssp             ---TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHH
T ss_pred             ---CCCCeEeccchhhccccccccccccccCCCChhhhhhhH
Confidence               55679999999998764432   2233466777777763

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3.1e-18  Score=107.74  Aligned_cols=88  Identities=27%  Similarity=0.354  Sum_probs=70.8

Q ss_pred             CeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          8 QSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      ..+++++|+.+|+|.+++..+.        ++.|++.|+.|||+++++|||+||+|+++.   ....+++.|||++....
T Consensus        84 ~~~~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~---~~~~~kl~DfG~a~~~~  160 (345)
T d1pmea_          84 KDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLARVAD  160 (345)
T ss_dssp             CCEEEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEECC
T ss_pred             ceEEEEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEEC---CCCCEEEcccCceeecc
Confidence            4456667788999999986533        789999999999999999999999999994   55679999999998764


Q ss_pred             CCC----Cccceeeccceecccc
Q psy14897         80 SSP----SYERHVTTQTTRIGRI   98 (99)
Q Consensus        80 ~~~----~~~~~~~t~~~~~~~~   98 (99)
                      ...    .....++|..|.+||+
T Consensus       161 ~~~~~~~~~~~~~gt~~y~aPE~  183 (345)
T d1pmea_         161 PDHDHTGFLTEYVATRWYRAPEI  183 (345)
T ss_dssp             GGGCBCCTTCCCCSCGGGCCGGG
T ss_pred             CCCccceeeccccccceechHHH
Confidence            332    2244578888999985

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=3.7e-18  Score=104.60  Aligned_cols=90  Identities=21%  Similarity=0.286  Sum_probs=69.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +...++||||+++|++.+.+..+          .++.|++.|+.|+|+++++|+|+++.|+++.   ....++++|||++
T Consensus        82 ~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~---~~~~vkl~DfGl~  158 (273)
T d1u46a_          82 TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA---TRDLVKIGDFGLM  158 (273)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE---ETTEEEECCCTTC
T ss_pred             ecchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccc---cccceeeccchhh
Confidence            45689999999999998876532          2789999999999999999999999999995   4457999999999


Q ss_pred             ecCCCCCCc----cceeeccceecccc
Q psy14897         76 KNVPSSPSY----ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~----~~~~~t~~~~~~~~   98 (99)
                      +.+......    ....++..|.+||+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~aPE~  185 (273)
T d1u46a_         159 RALPQNDDHYVMQEHRKVPFAWCAPES  185 (273)
T ss_dssp             EECCC-CCEEEC-----CCGGGCCHHH
T ss_pred             hhcccCCCcceecCccccCcccCCHHH
Confidence            987554322    12245566777764

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=3.8e-18  Score=106.09  Aligned_cols=90  Identities=19%  Similarity=0.285  Sum_probs=73.0

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc---------------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEE
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG---------------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLM   58 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~---------------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~   58 (99)
                      ....++||||+.+|+|.+++...                           .++.|++.|+.|||+++++|+|++++|+++
T Consensus        99 ~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~  178 (311)
T d1t46a_          99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL  178 (311)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccc
Confidence            35689999999999999987532                           278999999999999999999999999999


Q ss_pred             eeCCCCCeEEEeeccceecCCCCCCc---cceeeccceecccc
Q psy14897         59 GLGKRGNLVYIIDFGLAKNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        59 ~~~~~~~~~~l~d~g~a~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      .   ....++++|||.++........   ...++|..|.+||+
T Consensus       179 ~---~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~  218 (311)
T d1t46a_         179 T---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPES  218 (311)
T ss_dssp             E---TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHH
T ss_pred             c---ccCcccccccchheeccCCCcceEeeecccChHHcCHHH
Confidence            5   5667999999999877554322   23466777777764

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.72  E-value=7.5e-18  Score=104.03  Aligned_cols=92  Identities=26%  Similarity=0.446  Sum_probs=71.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeC--CCCCeEEEeecc
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLG--KRGNLVYIIDFG   73 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~--~~~~~~~l~d~g   73 (99)
                      +...++||||+ +++|.+.+...          .++.|++.++.|+|+++++|||+||+|+++...  .....+++.|||
T Consensus        73 ~~~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG  151 (293)
T d1csna_          73 GLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG  151 (293)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred             CCccEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccc
Confidence            35679999998 57888877532          278999999999999999999999999999532  124569999999


Q ss_pred             ceecCCCCC--------Cccceeeccceecccc
Q psy14897         74 LAKNVPSSP--------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        74 ~a~~~~~~~--------~~~~~~~t~~~~~~~~   98 (99)
                      +|+.+....        .....+||..|.+||+
T Consensus       152 ~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~  184 (293)
T d1csna_         152 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINT  184 (293)
T ss_dssp             TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHH
T ss_pred             eeEEcccCccccceeecccCceEEchhhcCHHH
Confidence            998764321        2234578999999985

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.9e-18  Score=106.86  Aligned_cols=90  Identities=19%  Similarity=0.144  Sum_probs=71.5

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++..+++|||+.+|+|.+.+..+          .++.|++.|+.|||+++++|||++++|+++.   ....+|++|||++
T Consensus        82 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~---~~~~~kl~DFGla  158 (317)
T d1xkka_          82 TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLA  158 (317)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---ETTEEEECCCSHH
T ss_pred             cCCeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeC---CCCCeEeeccccc
Confidence            45688999999999998877543          2789999999999999999999999999995   4567999999999


Q ss_pred             ecCCCCCCc---cceeeccceecccc
Q psy14897         76 KNVPSSPSY---ERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~---~~~~~t~~~~~~~~   98 (99)
                      +.+......   ....+|..|.+||+
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~y~APE~  184 (317)
T d1xkka_         159 KLLGAEEKEYHAEGGKVPIKWMALES  184 (317)
T ss_dssp             HHTTTTCC--------CCTTTSCHHH
T ss_pred             eecccccccccccccccCccccChHH
Confidence            887544322   22356888999984

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=7.1e-18  Score=105.01  Aligned_cols=89  Identities=18%  Similarity=0.221  Sum_probs=71.4

Q ss_pred             CCeEEEEEeeCCCCchhhhccc----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      +..++||||+++|+|.+++...          .++.|++.|+.|+|+.+++|+|+++.|++++   ....++++|||+++
T Consensus       102 ~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~---~~~~~kL~DFG~~~  178 (311)
T d1r0pa_         102 GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVKVADFGLAR  178 (311)
T ss_dssp             TEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTCCEEECSSGGGC
T ss_pred             CceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeEC---CCCCEEEecccchh
Confidence            4689999999999999877643          2789999999999999999999999999994   55679999999998


Q ss_pred             cCCCCCCc-----cceeeccceecccc
Q psy14897         77 NVPSSPSY-----ERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~~~-----~~~~~t~~~~~~~~   98 (99)
                      ........     ....+|..|.+||.
T Consensus       179 ~~~~~~~~~~~~~~~~~gt~~y~aPE~  205 (311)
T d1r0pa_         179 DMYDKEFDSVHNKTGAKLPVKWMALES  205 (311)
T ss_dssp             CTTTTTCCCTTCTTCSSCCGGGSCHHH
T ss_pred             hccccccccceecccccccccccChHH
Confidence            76543221     22346677777774

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.5e-18  Score=104.86  Aligned_cols=87  Identities=21%  Similarity=0.308  Sum_probs=65.0

Q ss_pred             CCeEEEEEeeCCCCchhhhccc-----------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG-----------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~-----------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      +.+++||||+++|+|.+++..+           .++.|++.|+.|||+++++|+|+++.|+++.   ....+++.|||.+
T Consensus        74 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~---~~~~~kl~dfg~s  150 (262)
T d1byga_          74 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLT  150 (262)
T ss_dssp             -CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTSCEEECCCCC-
T ss_pred             CcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheec---CCCCEeecccccc
Confidence            4589999999999999998543           2789999999999999999999999999994   5566999999999


Q ss_pred             ecCCCCCCccceeeccceecccc
Q psy14897         76 KNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      +......  ....++..|.+||+
T Consensus       151 ~~~~~~~--~~~~~~~~y~aPE~  171 (262)
T d1byga_         151 KEASSTQ--DTGKLPVKWTAPEA  171 (262)
T ss_dssp             -------------CCTTTSCHHH
T ss_pred             eecCCCC--ccccccccCCChHH
Confidence            8764432  33466777888874

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.72  E-value=5.6e-18  Score=104.63  Aligned_cols=92  Identities=42%  Similarity=0.612  Sum_probs=69.6

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .+..++||||+.+ ++...+..          ..++.|++.|+.|+|+++++|||++|+|+++........++++|||+|
T Consensus        75 ~~~~~ivme~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a  153 (299)
T d1ckia_          75 GDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA  153 (299)
T ss_dssp             TTEEEEEEECCCC-BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSC
T ss_pred             CCEEEEEEEEcCC-chhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcc
Confidence            3467889999854 55554432          127899999999999999999999999999853344557999999999


Q ss_pred             ecCCCCC--------Cccceeeccceecccc
Q psy14897         76 KNVPSSP--------SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~--------~~~~~~~t~~~~~~~~   98 (99)
                      +.+....        .....+||..|.+||+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  184 (299)
T d1ckia_         154 KKYRDARTHQHIPYRENKNLTGTARYASINT  184 (299)
T ss_dssp             EECBCTTTCCBCCCCBCCSCCCCSSSCCHHH
T ss_pred             eeccccccccceeccccCCcCCCccccCHHH
Confidence            9874432        1234578999999884

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=2.1e-18  Score=106.64  Aligned_cols=90  Identities=24%  Similarity=0.361  Sum_probs=69.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc----------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST----------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~----------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      ++.+++||||+.++.+......          ..++.|++.|+.|||+++++|||++|+|+++.   ....++++|||.|
T Consensus        73 ~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~---~~~~~kl~DFG~a  149 (298)
T d1gz8a_          73 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLA  149 (298)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECSTTHH
T ss_pred             ccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeec---ccCcceeccCCcc
Confidence            4578999999987544332221          22889999999999999999999999999994   4556899999999


Q ss_pred             ecCCCC-CCccceeeccceecccc
Q psy14897         76 KNVPSS-PSYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~-~~~~~~~~t~~~~~~~~   98 (99)
                      +..... .......+|..|.+||+
T Consensus       150 ~~~~~~~~~~~~~~gt~~y~apE~  173 (298)
T d1gz8a_         150 RAFGVPVRTYTHEVVTLWYRAPEI  173 (298)
T ss_dssp             HHHCCCSBCTTCCBCCCTTCCHHH
T ss_pred             eeccCCcccceeecccceeeehhh
Confidence            876443 33445578889988884

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.3e-17  Score=104.73  Aligned_cols=86  Identities=31%  Similarity=0.476  Sum_probs=70.3

Q ss_pred             CCeEEEEEeeCCCCchhhhccc--------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecC
Q psy14897          7 TQSCLVFPYSYGTKSGEQISTG--------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNV   78 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~~--------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~   78 (99)
                      ..+++||||+ +++|....+..        .++.|++.|+.|||+++++|+|++|+|+++.   ....+++.|||.|+..
T Consensus        96 ~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~---~~~~~kl~Dfg~a~~~  171 (346)
T d1cm8a_          96 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLARQA  171 (346)
T ss_dssp             CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEEC
T ss_pred             ceEEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcc---cccccccccccceecc
Confidence            3579999999 44666665432        2789999999999999999999999999994   5567999999999977


Q ss_pred             CCCCCccceeeccceecccc
Q psy14897         79 PSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        79 ~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ....  ...++|..|.+||+
T Consensus       172 ~~~~--~~~~~t~~y~aPE~  189 (346)
T d1cm8a_         172 DSEM--TGYVVTRWYRAPEV  189 (346)
T ss_dssp             CSSC--CSSCSCGGGCCTHH
T ss_pred             CCcc--ccccccccccCHHH
Confidence            5443  45678999999984

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=9.5e-18  Score=104.30  Aligned_cols=90  Identities=26%  Similarity=0.402  Sum_probs=69.9

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc---------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST---------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~---------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+.+++||||+.++.+......         ..++.|++.|+.|+|+++++|+|++++|+++.   ....+++.|||+++
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~---~~~~~kl~dfg~~~  165 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLAR  165 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCCTTCE
T ss_pred             CceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeec---CCCcEEeeecceee
Confidence            3568999999998766554432         23789999999999999999999999999994   55679999999998


Q ss_pred             cCCCCC-----Cccceeeccceecccc
Q psy14897         77 NVPSSP-----SYERHVTTQTTRIGRI   98 (99)
Q Consensus        77 ~~~~~~-----~~~~~~~t~~~~~~~~   98 (99)
                      .+....     .....++|.+|.+||+
T Consensus       166 ~~~~~~~~~~~~~~~~~gT~~Y~aPE~  192 (318)
T d3blha1         166 AFSLAKNSQPNRYTNRVVTLWYRPPEL  192 (318)
T ss_dssp             ECCC-----CCCCCSCCSCGGGCCHHH
T ss_pred             ecccccccccccccceecCHHHhhHHH
Confidence            764322     2234578999999984

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.70  E-value=4.1e-18  Score=105.52  Aligned_cols=90  Identities=26%  Similarity=0.366  Sum_probs=70.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc---------------------------------chHHHHHHHHHHHHhhCCeeecCcC
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST---------------------------------GKEDREWIGRIDYIHSRNFIHRDIK   52 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~---------------------------------~~~~~~i~~~l~~lh~~~i~h~~l~   52 (99)
                      .+..++||||+.+|+|.+++..                                 ..++.|++.|+.|+|+++++|+|++
T Consensus        88 ~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlK  167 (301)
T d1lufa_          88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA  167 (301)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEc
Confidence            4678999999999999998842                                 1268999999999999999999999


Q ss_pred             CCcEEEeeCCCCCeEEEeeccceecCCCCCC---ccceeeccceecccc
Q psy14897         53 PDNFLMGLGKRGNLVYIIDFGLAKNVPSSPS---YERHVTTQTTRIGRI   98 (99)
Q Consensus        53 ~~~~l~~~~~~~~~~~l~d~g~a~~~~~~~~---~~~~~~t~~~~~~~~   98 (99)
                      ++|++++   ....+|++|||+|+.+.....   ....+++..|.+||+
T Consensus       168 p~NILld---~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~  213 (301)
T d1lufa_         168 TRNCLVG---ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPES  213 (301)
T ss_dssp             GGGEEEC---GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHH
T ss_pred             ccceEEC---CCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHH
Confidence            9999995   455699999999986644322   123456667777774

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.2e-17  Score=103.80  Aligned_cols=89  Identities=13%  Similarity=0.213  Sum_probs=71.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccc-------------------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCe
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTG-------------------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNL   66 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~-------------------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~   66 (99)
                      ++..++||||+.+|+|.+++...                   .++.|++.|+.|||+++++|+|+++.|+++.   ....
T Consensus        95 ~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld---~~~~  171 (308)
T d1p4oa_          95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFT  171 (308)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC---TTCC
T ss_pred             CCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeec---CCce
Confidence            46789999999999999987532                   2789999999999999999999999999994   5567


Q ss_pred             EEEeeccceecCCCCCC---ccceeeccceeccc
Q psy14897         67 VYIIDFGLAKNVPSSPS---YERHVTTQTTRIGR   97 (99)
Q Consensus        67 ~~l~d~g~a~~~~~~~~---~~~~~~t~~~~~~~   97 (99)
                      +|++|||+++.+.....   .....+|..|.+||
T Consensus       172 ~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe  205 (308)
T d1p4oa_         172 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE  205 (308)
T ss_dssp             EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHH
T ss_pred             EEEeecccceeccCCcceeeccceecccccCCHH
Confidence            99999999987643322   23335667777765

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.7e-17  Score=103.74  Aligned_cols=89  Identities=24%  Similarity=0.277  Sum_probs=71.1

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ....++||||+.+|+|.+.+....         ++.|++.|+.|+|+++++|+|++|+|+++.   ....+++.|||+++
T Consensus       101 ~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~---~~~~vkL~DFG~a~  177 (322)
T d1vzoa_         101 ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSK  177 (322)
T ss_dssp             TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEESCSSEEE
T ss_pred             CCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeec---CCCCEEEeeccchh
Confidence            457899999999999999886532         789999999999999999999999999994   45679999999998


Q ss_pred             cCCCCCCc--cceeeccceeccc
Q psy14897         77 NVPSSPSY--ERHVTTQTTRIGR   97 (99)
Q Consensus        77 ~~~~~~~~--~~~~~t~~~~~~~   97 (99)
                      .+......  ....++..|.+||
T Consensus       178 ~~~~~~~~~~~~~~g~~~~~~pe  200 (322)
T d1vzoa_         178 EFVADETERAYDFCGTIEYMAPD  200 (322)
T ss_dssp             ECCGGGGGGGCGGGSCCTTCCHH
T ss_pred             hhcccccccccccccccccchhH
Confidence            77543322  2335566666665

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=4.5e-17  Score=102.76  Aligned_cols=90  Identities=24%  Similarity=0.264  Sum_probs=61.8

Q ss_pred             CCCeEEEEEeeCCCCchhhhcc------chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCC
Q psy14897          6 STQSCLVFPYSYGTKSGEQIST------GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVP   79 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~------~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~   79 (99)
                      .+.+|+||||+.++.+......      +.++.|++.|+.|||+++++|+|+||+|+++.   ....+++.|||+++...
T Consensus        94 ~~~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~---~~~~~kl~df~~~~~~~  170 (355)
T d2b1pa1          94 FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLARTAG  170 (355)
T ss_dssp             CCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCCCC-----
T ss_pred             CceeEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccc---cccceeeechhhhhccc
Confidence            3678999999987544433221      23889999999999999999999999999994   55668999999998877


Q ss_pred             CCCCccceeeccceecccc
Q psy14897         80 SSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        80 ~~~~~~~~~~t~~~~~~~~   98 (99)
                      ........++|..|.+||.
T Consensus       171 ~~~~~~~~~~t~~y~aPE~  189 (355)
T d2b1pa1         171 TSFMMTPYVVTRYYRAPEV  189 (355)
T ss_dssp             ----------CCTTCCHHH
T ss_pred             cccccccccccccccChhh
Confidence            6666666788999999985

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=4e-17  Score=102.43  Aligned_cols=88  Identities=26%  Similarity=0.386  Sum_probs=67.3

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch--------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceec
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK--------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKN   77 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~--------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~   77 (99)
                      +...++||||+.+|+|.+++..++        ++.|++.|+.|||+++++|||+||+|+++.   ....+++.|||.+..
T Consensus        94 ~~~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~---~~~~~kl~dfg~a~~  170 (348)
T d2gfsa1          94 EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARH  170 (348)
T ss_dssp             TCCCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECCC----C
T ss_pred             cCceEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccc---ccccccccccchhcc
Confidence            445677788889999999886543        789999999999999999999999999994   556689999999876


Q ss_pred             CCCCCCccceeeccceecccc
Q psy14897         78 VPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        78 ~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ....  .....+|..|.+||+
T Consensus       171 ~~~~--~~~~~g~~~y~apE~  189 (348)
T d2gfsa1         171 TDDE--MTGYVATRWYRAPEI  189 (348)
T ss_dssp             CTGG--GSSSCHHHHTSCHHH
T ss_pred             cCcc--cccccccccccCchh
Confidence            5433  244567777887774

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.65  E-value=4.6e-17  Score=99.95  Aligned_cols=91  Identities=26%  Similarity=0.337  Sum_probs=68.4

Q ss_pred             CCCCeEEEEEeeCCCCchhhhccc---------hHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccce
Q psy14897          5 RSTQSCLVFPYSYGTKSGEQISTG---------KEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLA   75 (99)
Q Consensus         5 ~~~~~~~v~e~~~~g~l~~~l~~~---------~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a   75 (99)
                      .++..+++|||+.++.+......+         .++.|++.|+.|+|+++++|||+||+|+++.   ....++++|||.+
T Consensus        71 ~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~---~~~~~kl~DfG~a  147 (286)
T d1ob3a_          71 TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN---REGELKIADFGLA  147 (286)
T ss_dssp             CSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECCTTHH
T ss_pred             cCCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEc---CCCCEEecccccc
Confidence            456789999999987777666533         2889999999999999999999999999994   5567999999999


Q ss_pred             ecCCCCC-Cccceeeccceecccc
Q psy14897         76 KNVPSSP-SYERHVTTQTTRIGRI   98 (99)
Q Consensus        76 ~~~~~~~-~~~~~~~t~~~~~~~~   98 (99)
                      ....... ......++..|.+||+
T Consensus       148 ~~~~~~~~~~~~~~~~~~y~~pE~  171 (286)
T d1ob3a_         148 RAFGIPVRKYTHEIVTLWYRAPDV  171 (286)
T ss_dssp             HHHCC---------CCCTTCCHHH
T ss_pred             eecccCccccceecccchhhhHHH
Confidence            8764432 2233456777777763

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=2.2e-16  Score=96.85  Aligned_cols=89  Identities=26%  Similarity=0.324  Sum_probs=69.7

Q ss_pred             CCCeEEEEEeeCCCCchhhhccch---------HHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897          6 STQSCLVFPYSYGTKSGEQISTGK---------EDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus         6 ~~~~~~v~e~~~~g~l~~~l~~~~---------~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      ....++|+|++.++++...+...+         ++.|++.|+.|+|+++++|+|++|+|+++.   ....+++.|||.++
T Consensus        73 ~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~---~~~~~kl~DFG~a~  149 (292)
T d1unla_          73 DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLAR  149 (292)
T ss_dssp             SSEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred             ccceeEEeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccc---cCCceeeeecchhh
Confidence            456799999999988887765432         789999999999999999999999999994   55679999999998


Q ss_pred             cCCCCCCc-cceeeccceeccc
Q psy14897         77 NVPSSPSY-ERHVTTQTTRIGR   97 (99)
Q Consensus        77 ~~~~~~~~-~~~~~t~~~~~~~   97 (99)
                      ........ ....++..+.+||
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~pe  171 (292)
T d1unla_         150 AFGIPVRCYSAEVVTLWYRPPD  171 (292)
T ss_dssp             ECCSCCSCCCSCCSCGGGCCHH
T ss_pred             cccCCCccceeeccccchhhhh
Confidence            87554322 2234455566655

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.48  E-value=3.4e-14  Score=82.58  Aligned_cols=71  Identities=14%  Similarity=0.167  Sum_probs=56.6

Q ss_pred             CCeEEEEEeeCCCCchhhhcc--chHHHHHHHHHHHHhhCCeeecCcCCCcEEEeeCCCCCeEEEeeccceecCCCC
Q psy14897          7 TQSCLVFPYSYGTKSGEQIST--GKEDREWIGRIDYIHSRNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAKNVPSS   81 (99)
Q Consensus         7 ~~~~~v~e~~~~g~l~~~l~~--~~~~~~i~~~l~~lh~~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~~~~~~   81 (99)
                      ...+++|||+.++.+......  ..++.|++.++.++|+++++|+|++|.|+++.    ...+++.|||.|......
T Consensus        83 ~~~~lvme~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~----~~~~~liDFG~a~~~~~~  155 (191)
T d1zara2          83 EGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS----EEGIWIIDFPQSVEVGEE  155 (191)
T ss_dssp             ETTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE----TTEEEECCCTTCEETTST
T ss_pred             cCCEEEEEeeccccccchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeee----CCCEEEEECCCcccCCCC
Confidence            345799999998766543322  34889999999999999999999999999995    234889999999876533

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.27  E-value=6e-12  Score=78.78  Aligned_cols=89  Identities=21%  Similarity=0.257  Sum_probs=63.7

Q ss_pred             CeEEEEEeeCCCCchhhhc------------cchHHHHHHHHHHHHhh-CCeeecCcCCCcEEEeeCCC---CCeEEEee
Q psy14897          8 QSCLVFPYSYGTKSGEQIS------------TGKEDREWIGRIDYIHS-RNFIHRDIKPDNFLMGLGKR---GNLVYIID   71 (99)
Q Consensus         8 ~~~~v~e~~~~g~l~~~l~------------~~~~~~~i~~~l~~lh~-~~i~h~~l~~~~~l~~~~~~---~~~~~l~d   71 (99)
                      ..+++|++...+.......            ...++.|++.|+.|+|+ .+++|||++|+|+++.....   ...+++.|
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~d  175 (362)
T d1q8ya_          96 GVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIAD  175 (362)
T ss_dssp             EEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECC
T ss_pred             ceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEee
Confidence            3566777666544322211            12378999999999998 88999999999999853221   12578999


Q ss_pred             ccceecCCCCCCccceeeccceecccc
Q psy14897         72 FGLAKNVPSSPSYERHVTTQTTRIGRI   98 (99)
Q Consensus        72 ~g~a~~~~~~~~~~~~~~t~~~~~~~~   98 (99)
                      ||.+.......  ...++|..|.+||+
T Consensus       176 fg~s~~~~~~~--~~~~gt~~y~aPE~  200 (362)
T d1q8ya_         176 LGNACWYDEHY--TNSIQTREYRSPEV  200 (362)
T ss_dssp             CTTCEETTBCC--CSCCSCGGGCCHHH
T ss_pred             ccccccccccc--ccccccccccChhh
Confidence            99998765443  45678999999984

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.14  E-value=0.099  Score=29.93  Aligned_cols=29  Identities=28%  Similarity=0.478  Sum_probs=22.5

Q ss_pred             CeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897         45 NFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus        45 ~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .++|.|+.+.|+++.   .+....+.||+.+.
T Consensus       184 ~l~HgD~~~~Nil~~---~~~~~~lIDwe~a~  212 (263)
T d1j7la_         184 VFSHGDLGDSNIFVK---DGKVSGFIDLGRSG  212 (263)
T ss_dssp             EEECSCCCTTSEEEE---TTEEEEECCCTTCE
T ss_pred             EEEEeeccCcceeec---CCceEEEeechhcc
Confidence            378999999999994   34445689988765

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=87.21  E-value=0.12  Score=30.66  Aligned_cols=30  Identities=33%  Similarity=0.403  Sum_probs=24.2

Q ss_pred             CCeeecCcCCCcEEEeeCCCCCeEEEeecccee
Q psy14897         44 RNFIHRDIKPDNFLMGLGKRGNLVYIIDFGLAK   76 (99)
Q Consensus        44 ~~i~h~~l~~~~~l~~~~~~~~~~~l~d~g~a~   76 (99)
                      .+++|.|+.+.|+++.   ......+.||+.+.
T Consensus       183 ~giIHgDl~~dNvl~~---~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFL---GDELSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGGEEEE---TTEEEEECCCTTCE
T ss_pred             cccccCCcchhhhhcc---cccceeEecccccc
Confidence            4799999999999994   44456899999764