BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy149
(86 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|350417323|ref|XP_003491366.1| PREDICTED: DNA polymerase alpha subunit B-like [Bombus impatiens]
Length = 593
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 56/77 (72%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
+ + ++V+AGP+T SD L+Y+PL DL+ V+ EP++LIL+GP ++ +HP + SL ET
Sbjct: 339 KDIKIYVAAGPFTPSDNLNYQPLWDLMERVVEDEPNMLILVGPFVEYTHPEIKKCSLKET 398
Query: 66 FEDFYVKLIDSIVQPLE 82
F+DF+ L+ I+Q L+
Sbjct: 399 FQDFFDTLLTKILQYLQ 415
>gi|242003174|ref|XP_002422639.1| DNA polymerase subunit alpha B, putative [Pediculus humanus
corporis]
gi|212505440|gb|EEB09901.1| DNA polymerase subunit alpha B, putative [Pediculus humanus
corporis]
Length = 460
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 54/76 (71%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
LS+ V++GPYT SD+++Y+PL DL+ V EP LIL GP +++ HP+ LAET E
Sbjct: 230 LSVMVASGPYTPSDSMTYQPLLDLMKEVVNVEPHALILTGPFIESDHPVFSENMLAETME 289
Query: 68 DFYVKLIDSIVQPLEK 83
DF K+++ I++P+E+
Sbjct: 290 DFLEKIMEKIMKPIER 305
>gi|357628416|gb|EHJ77759.1| DNA-directed DNA polymerase alpha 2 [Danaus plexippus]
Length = 586
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 52/74 (70%)
Query: 5 RRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAE 64
+ +LSM V+AGPYT S+ +SY+PL+D IA +P V+I+ GP +D H + + S+AE
Sbjct: 332 KGTLSMVVAAGPYTTSNNMSYEPLKDFIAYLNTHKPHVVIMTGPFVDCEHEKVKDNSMAE 391
Query: 65 TFEDFYVKLIDSIV 78
T++ F+ KLIDS+
Sbjct: 392 TYKSFFDKLIDSLA 405
>gi|340714315|ref|XP_003395675.1| PREDICTED: DNA polymerase alpha subunit B-like [Bombus terrestris]
Length = 593
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 56/77 (72%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
+ + ++V+AGP+T SD L+Y+PL DL+ V+ EP++LIL+GP ++ +HP + SL ET
Sbjct: 339 KDIKIYVAAGPFTPSDNLNYQPLWDLMERVVEDEPNMLILVGPFVEYTHPEIKKCSLKET 398
Query: 66 FEDFYVKLIDSIVQPLE 82
F+DF+ L+ I+Q L+
Sbjct: 399 FQDFFDTLLTKILQYLQ 415
>gi|156384823|ref|XP_001633332.1| predicted protein [Nematostella vectensis]
gi|156220400|gb|EDO41269.1| predicted protein [Nematostella vectensis]
Length = 607
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+AGPYT SD+L Y+PL DLI + + +PD+LIL+GP +D+ H + N L ETFE
Sbjct: 349 VVVAAGPYTTSDSLMYEPLADLIRMVQKNKPDLLILLGPFVDSKHEKIENVDLDETFESL 408
Query: 70 YVKLIDSIVQPLEKPG 85
+ + +D I Q E+ G
Sbjct: 409 FKRQVDLITQATERQG 424
>gi|328788469|ref|XP_001120826.2| PREDICTED: DNA polymerase alpha subunit B [Apis mellifera]
Length = 582
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 55/75 (73%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
+ ++V+ GP+T SD L+Y+PL DL+ ++EP++LILIGP ++ +HP + N +L ET++
Sbjct: 330 IKIYVAVGPFTPSDNLNYQPLWDLMNRVAEEEPNILILIGPFIEYTHPEIKNCTLKETYQ 389
Query: 68 DFYVKLIDSIVQPLE 82
DF+ ++ I+Q L+
Sbjct: 390 DFFDAILMKILQYLQ 404
>gi|380025274|ref|XP_003696402.1| PREDICTED: DNA polymerase alpha subunit B-like [Apis florea]
Length = 531
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 55/75 (73%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
+ ++V+ GP+T SD L+Y+PL DL+ V++EP++LILIGP ++ +HP + +L ET++
Sbjct: 279 IKIYVAVGPFTSSDNLNYQPLWDLMNRVVEEEPNILILIGPFIEYTHPEIKKCTLKETYQ 338
Query: 68 DFYVKLIDSIVQPLE 82
DF+ ++ I+Q L+
Sbjct: 339 DFFDTILMKILQYLQ 353
>gi|348514227|ref|XP_003444642.1| PREDICTED: DNA polymerase alpha subunit B isoform 1 [Oreochromis
niloticus]
Length = 602
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
L++ V+ GPYT SD+L++ PL DLI + V+ PDV +L+GP +D+ H + + ETFE
Sbjct: 344 LNVLVACGPYTPSDSLTFDPLLDLINVIVRDRPDVCLLLGPFVDSKHEQIEKAQVTETFE 403
Query: 68 DFYVKLIDSIV 78
+ + + I+SIV
Sbjct: 404 NIFNRCIESIV 414
>gi|432877683|ref|XP_004073218.1| PREDICTED: DNA polymerase alpha subunit B-like [Oryzias latipes]
Length = 603
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 49/71 (69%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
L++ V+ GPYT SD+L++ PL DLI++ + PDV +++GP +D+ H + G + ETFE
Sbjct: 345 LNVLVACGPYTPSDSLTFDPLLDLISVITRDRPDVCLMLGPFVDSRHEQIEKGQVTETFE 404
Query: 68 DFYVKLIDSIV 78
+ + I+SIV
Sbjct: 405 GIFSRCIESIV 415
>gi|390332265|ref|XP_003723454.1| PREDICTED: DNA polymerase alpha subunit B-like isoform 1
[Strongylocentrotus purpuratus]
Length = 604
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETF 66
+L + V+AGP++ SD LS +PLEDLI + + PD IL+GP +D H + +GSL E++
Sbjct: 344 NLHLLVAAGPFSTSDNLSLEPLEDLIKVIKKTRPDACILLGPFVDVEHGQIKDGSLGESY 403
Query: 67 EDFYVKLIDSIVQPLEKPG 85
+ + ++ +IV+ E G
Sbjct: 404 DKVFSDIVQAIVRKTESVG 422
>gi|115803045|ref|XP_780208.2| PREDICTED: DNA polymerase alpha subunit B-like isoform 2
[Strongylocentrotus purpuratus]
Length = 604
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETF 66
+L + V+AGP++ SD LS +PLEDLI + + PD IL+GP +D H + +GSL E++
Sbjct: 344 NLHLLVAAGPFSTSDNLSLEPLEDLIKVIKKTRPDACILLGPFVDVEHGQIKDGSLGESY 403
Query: 67 EDFYVKLIDSIVQPLEKPG 85
+ + ++ +IV+ E G
Sbjct: 404 DKVFSDIVQAIVRKTESVG 422
>gi|348514229|ref|XP_003444643.1| PREDICTED: DNA polymerase alpha subunit B isoform 2 [Oreochromis
niloticus]
Length = 621
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
L++ V+ GPYT SD+L++ PL DLI + V+ PDV +L+GP +D+ H + + ETFE
Sbjct: 363 LNVLVACGPYTPSDSLTFDPLLDLINVIVRDRPDVCLLLGPFVDSKHEQIEKAQVTETFE 422
Query: 68 DFYVKLIDSIV 78
+ + + I+SIV
Sbjct: 423 NIFNRCIESIV 433
>gi|383863803|ref|XP_003707369.1| PREDICTED: DNA polymerase alpha subunit B-like [Megachile
rotundata]
Length = 593
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 55/77 (71%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
+ L ++V+ GP+T S+ L+Y+PL DL+ ++EP+VLIL+GP ++ +HP + +L +T
Sbjct: 339 KDLRIYVAVGPFTASNNLNYQPLWDLMERVSEEEPNVLILVGPFIEYTHPEIKKCTLKDT 398
Query: 66 FEDFYVKLIDSIVQPLE 82
+++F+ K++ I Q L+
Sbjct: 399 YQEFFDKILARITQCLQ 415
>gi|410913631|ref|XP_003970292.1| PREDICTED: DNA polymerase alpha subunit B-like [Takifugu rubripes]
Length = 598
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 4 TRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLA 63
T +++ V+ GPYT SD+L++ PL DLI + + PDV IL+GP +D+ H + +
Sbjct: 337 TEEPVNILVACGPYTPSDSLTFDPLLDLIHVIARDRPDVCILLGPFVDSKHEQIEKAQVT 396
Query: 64 ETFEDFYVKLIDSIVQPLEKPG 85
ETFE + + ++SIV + G
Sbjct: 397 ETFEAIFSRCMESIVDGTKSTG 418
>gi|195349906|ref|XP_002041483.1| GM10379 [Drosophila sechellia]
gi|194123178|gb|EDW45221.1| GM10379 [Drosophila sechellia]
Length = 609
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R L V++GP+T S L Y+PL DL+ PDVL+L GP LD H ++ G LAET
Sbjct: 358 RELQFVVASGPFTDSTDLFYEPLHDLLKYLKDHRPDVLVLTGPFLDADHKMV--GELAET 415
Query: 66 FEDFYVKLIDSIVQPL 81
F+ F+ K+I I++ +
Sbjct: 416 FDTFFEKMIGGIMEAI 431
>gi|195503826|ref|XP_002098816.1| GE23725 [Drosophila yakuba]
gi|194184917|gb|EDW98528.1| GE23725 [Drosophila yakuba]
Length = 609
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R L V++GP+T S L Y+PL DL+ PDVL+L GP LD H ++ G LAET
Sbjct: 358 RELQFVVASGPFTDSTDLFYEPLHDLLKYIKDHRPDVLVLTGPFLDADHKMV--GELAET 415
Query: 66 FEDFYVKLIDSIVQPL 81
F+ F+ K+I I++ +
Sbjct: 416 FDTFFEKMIAGIMEAI 431
>gi|194745768|ref|XP_001955359.1| GF16278 [Drosophila ananassae]
gi|190628396|gb|EDV43920.1| GF16278 [Drosophila ananassae]
Length = 601
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R L V+AGP+T S L Y+PL DL+ PDVL+L GP LD H + G LAET
Sbjct: 350 RELQFVVAAGPFTDSTDLCYEPLHDLLNYLKDHRPDVLVLTGPFLDADHKTV--GELAET 407
Query: 66 FEDFYVKLIDSIV 78
F+ F+ K+I I+
Sbjct: 408 FDSFFEKMIAGIM 420
>gi|221459889|ref|NP_733206.3| DNA polymerase alpha 73kD [Drosophila melanogaster]
gi|229462839|sp|Q9VB62.2|DPOA2_DROME RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 73 kDa subunit
gi|220903233|gb|AAF56680.4| DNA polymerase alpha 73kD [Drosophila melanogaster]
Length = 609
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R L V++GP+T S L Y+PL DL+ PDVL+L GP LD H ++ G LAET
Sbjct: 358 RELQFVVASGPFTDSTDLFYEPLHDLLKYLKDHRPDVLVLTGPFLDADHKMV--GELAET 415
Query: 66 FEDFYVKLIDSIVQPL 81
F+ F+ K+I I++ +
Sbjct: 416 FDTFFEKMIGGIMESI 431
>gi|16768544|gb|AAL28491.1| GM08365p [Drosophila melanogaster]
Length = 609
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R L V++GP+T S L Y+PL DL+ PDVL+L GP LD H ++ G LAET
Sbjct: 358 RELQFVVASGPFTDSTDLFYEPLHDLLKYLKDHRPDVLVLTGPFLDADHKMV--GELAET 415
Query: 66 FEDFYVKLIDSIVQPL 81
F+ F+ K+I I++ +
Sbjct: 416 FDTFFEKMIGGIMESI 431
>gi|198451445|ref|XP_001358373.2| GA19232 [Drosophila pseudoobscura pseudoobscura]
gi|198131493|gb|EAL27512.2| GA19232 [Drosophila pseudoobscura pseudoobscura]
Length = 609
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R L V+AGPYT S L Y PL DL+ PDVL+L+GP +D H L+ +AET
Sbjct: 355 RELQFVVAAGPYTHSTDLFYDPLHDLLKYLKDHRPDVLVLVGPFVDADHKLV--AEMAET 412
Query: 66 FEDFYVKLIDSIV 78
F+ F+ K+I I+
Sbjct: 413 FDSFFEKMISGIM 425
>gi|47225240|emb|CAG09740.1| unnamed protein product [Tetraodon nigroviridis]
Length = 347
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 52/83 (62%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
+++ +++ V+ GPYT SD+L++ PL DLI + + PDV IL+GP +D+ H + +
Sbjct: 85 MSKEPVNILVACGPYTPSDSLTFDPLLDLIHVITRDGPDVCILLGPFVDSKHEQIEKAQV 144
Query: 63 AETFEDFYVKLIDSIVQPLEKPG 85
ETF+ + + I+SIV + G
Sbjct: 145 TETFDAIFSRCIESIVDGTKSTG 167
>gi|301762582|ref|XP_002916691.1| PREDICTED: DNA polymerase alpha subunit B-like [Ailuropoda
melanoleuca]
Length = 595
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ + +PDV IL GP LD H + N L FED
Sbjct: 338 VLVACGPYTTSDSITYDPLLDLIAIINRDQPDVCILFGPFLDAKHEQVENCLLTSPFEDI 397
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 398 FKQCLRTIIEGTRSSG 413
>gi|74228759|dbj|BAE21869.1| unnamed protein product [Mus musculus]
Length = 600
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 12 VSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDFYV 71
V+ GPYT SD+++Y PL DLIA+ + +PDV IL GP LD H + N L FED +
Sbjct: 344 VACGPYTTSDSITYDPLLDLIAIINRDQPDVCILFGPFLDAKHEQVENCKLTSPFEDVFK 403
Query: 72 KLIDSIVQPLEKPG 85
+ + ++++ G
Sbjct: 404 QCLRTVIEGTRSSG 417
>gi|194907522|ref|XP_001981570.1| GG11537 [Drosophila erecta]
gi|190656208|gb|EDV53440.1| GG11537 [Drosophila erecta]
Length = 609
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R L V++GP+T S L Y+PL DL+ PDVL+L GP LD H ++ G LAET
Sbjct: 358 RELQFVVASGPFTDSTDLFYEPLHDLLKYIKDHRPDVLVLTGPFLDADHKMV--GELAET 415
Query: 66 FEDFYVKLIDSIVQ 79
F+ F+ K+I I++
Sbjct: 416 FDTFFEKMIAGIME 429
>gi|31982107|ref|NP_032919.2| DNA polymerase alpha subunit B isoform 1 [Mus musculus]
gi|341940457|sp|P33611.2|DPOA2_MOUSE RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 70 kDa subunit
gi|18204750|gb|AAH21424.1| Polymerase (DNA directed), alpha 2 [Mus musculus]
gi|40352968|gb|AAH64795.1| Polymerase (DNA directed), alpha 2 [Mus musculus]
gi|74211927|dbj|BAE29306.1| unnamed protein product [Mus musculus]
gi|148701243|gb|EDL33190.1| polymerase (DNA directed), alpha 2, isoform CRA_c [Mus musculus]
Length = 600
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 12 VSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDFYV 71
V+ GPYT SD+++Y PL DLIA+ + +PDV IL GP LD H + N L FED +
Sbjct: 344 VACGPYTTSDSITYDPLLDLIAIINRDQPDVCILFGPFLDAKHEQVENCKLTSPFEDVFK 403
Query: 72 KLIDSIVQPLEKPG 85
+ + ++++ G
Sbjct: 404 QCLRTVIEGTRSSG 417
>gi|148701242|gb|EDL33189.1| polymerase (DNA directed), alpha 2, isoform CRA_b [Mus musculus]
Length = 608
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 12 VSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDFYV 71
V+ GPYT SD+++Y PL DLIA+ + +PDV IL GP LD H + N L FED +
Sbjct: 386 VACGPYTTSDSITYDPLLDLIAIINRDQPDVCILFGPFLDAKHEQVENCKLTSPFEDVFK 445
Query: 72 KLIDSIVQPLEKPG 85
+ + ++++ G
Sbjct: 446 QCLRTVIEGTRSSG 459
>gi|195394642|ref|XP_002055951.1| GJ10668 [Drosophila virilis]
gi|194142660|gb|EDW59063.1| GJ10668 [Drosophila virilis]
Length = 600
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R + V+AGPYT S L Y+PL +L+ + PDVL+L GP +D H L+ G LAET
Sbjct: 347 RDVQFVVAAGPYTHSTDLFYEPLHELLKYLKEHRPDVLLLTGPFVDAEHKLV--GDLAET 404
Query: 66 FEDFYVKLIDSIV 78
F+ F+ K+I I+
Sbjct: 405 FDSFFEKMISGIM 417
>gi|281350633|gb|EFB26217.1| hypothetical protein PANDA_004805 [Ailuropoda melanoleuca]
Length = 569
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ + +PDV IL GP LD H + N L FED
Sbjct: 312 VLVACGPYTTSDSITYDPLLDLIAIINRDQPDVCILFGPFLDAKHEQVENCLLTSPFEDI 371
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 372 FKQCLRTIIEGTRSSG 387
>gi|73983698|ref|XP_533234.2| PREDICTED: DNA polymerase alpha subunit B [Canis lupus familiaris]
Length = 595
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ + +PDV IL GP LD H + N L FED
Sbjct: 338 VLVACGPYTTSDSITYDPLLDLIAIINRDQPDVCILFGPFLDAKHEQVENCLLTSPFEDI 397
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 398 FKQCLRTIIEGTRSSG 413
>gi|395544820|ref|XP_003774304.1| PREDICTED: DNA polymerase alpha subunit B, partial [Sarcophilus
harrisii]
Length = 634
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y P+ DLI++ + +PDV IL+GP LD H + N L +FED
Sbjct: 380 LLVACGPYTTSDSITYDPMMDLISVISRDQPDVCILLGPFLDAKHEQVENCQLTPSFEDV 439
Query: 70 YVKLIDSIVQPLEKPG 85
+ + +I++ G
Sbjct: 440 FKHCLRTIIEGTRSSG 455
>gi|195146190|ref|XP_002014070.1| GL24481 [Drosophila persimilis]
gi|194103013|gb|EDW25056.1| GL24481 [Drosophila persimilis]
Length = 259
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R L V+AGPYT S L Y PL DL+ PDVL+L+GP +D H L+ +AET
Sbjct: 5 RELQFVVAAGPYTHSTDLFYDPLHDLLKYLKDHRPDVLVLVGPFVDADHKLV--AEMAET 62
Query: 66 FEDFYVKLIDSIV 78
F+ F+ K++ I+
Sbjct: 63 FDSFFEKMVSGIM 75
>gi|74139710|dbj|BAE31706.1| unnamed protein product [Mus musculus]
Length = 414
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ + +PDV IL GP LD H + N L FED
Sbjct: 302 VVVACGPYTTSDSITYDPLLDLIAIINRDQPDVCILFGPFLDAKHEQVENCKLTSPFEDV 361
Query: 70 YVKLIDSIVQ 79
+ + + ++++
Sbjct: 362 FKQCLRTVIE 371
>gi|195553448|ref|XP_002076668.1| GD15188 [Drosophila simulans]
gi|194202279|gb|EDX15855.1| GD15188 [Drosophila simulans]
Length = 307
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R L V++GP+T S L Y+PL DL+ PDVL+L GP LD H ++ G LAET
Sbjct: 56 RELQFVVASGPFTDSTDLFYEPLHDLLKYLKDHRPDVLVLTGPFLDADHKMV--GELAET 113
Query: 66 FEDFYVKLIDSIVQPL 81
F+ F+ K+I I++ +
Sbjct: 114 FDTFFEKMIGGIMEAI 129
>gi|255708463|ref|NP_001157529.1| DNA polymerase alpha subunit B isoform 2 [Mus musculus]
gi|26352896|dbj|BAC40078.1| unnamed protein product [Mus musculus]
Length = 566
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 12 VSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDFYV 71
V+ GPYT SD+++Y PL DLIA+ + +PDV IL GP LD H + N L FED +
Sbjct: 344 VACGPYTTSDSITYDPLLDLIAIINRDQPDVCILFGPFLDAKHEQVENCKLTSPFEDVFK 403
Query: 72 KLIDSIVQPLEKPG 85
+ + ++++ G
Sbjct: 404 QCLRTVIEGTRSSG 417
>gi|23271843|gb|AAH23688.1| Pola2 protein [Mus musculus]
Length = 454
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ + +PDV IL GP LD H + N L FED
Sbjct: 342 VVVACGPYTTSDSITYDPLLDLIAIINRDQPDVCILFGPFLDAKHEQVENCKLTSPFEDV 401
Query: 70 YVKLIDSIVQ 79
+ + + ++++
Sbjct: 402 FKQCLRTVIE 411
>gi|41107576|gb|AAH65460.1| Pola2 protein [Danio rerio]
Length = 600
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ ++ GPYT S++L+Y PL DLI + + PDV IL GP +D+ H + + ETFE
Sbjct: 345 VMIACGPYTPSESLTYDPLLDLITIINKDRPDVCILFGPFVDSKHEQIEKNQVTETFETI 404
Query: 70 YVKLIDSIVQ 79
+ + +DSIV+
Sbjct: 405 FKRCMDSIVE 414
>gi|410974408|ref|XP_003993639.1| PREDICTED: DNA polymerase alpha subunit B [Felis catus]
Length = 599
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ + PDV IL+GP LD H + N L FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLIAIINRDRPDVCILLGPFLDAKHEQVENCLLTSPFEDV 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|41054613|ref|NP_955875.1| DNA polymerase alpha subunit B [Danio rerio]
gi|28279175|gb|AAH45928.1| Polymerase (DNA directed), alpha 2 [Danio rerio]
Length = 599
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ ++ GPYT S++L+Y PL DLI + + PDV IL GP +D+ H + + ETFE
Sbjct: 344 VMIACGPYTPSESLTYDPLLDLITIINKDRPDVCILFGPFVDSKHEQIEKNQVTETFETI 403
Query: 70 YVKLIDSIVQ 79
+ + +DSIV+
Sbjct: 404 FKRCMDSIVE 413
>gi|218186644|gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indica Group]
Length = 625
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R LS ++AGPYT SD L ++PL++LI+ +++P +LIL+GP +D+ HP + G++ ++
Sbjct: 359 RVLSSVIAAGPYTTSDNLLFEPLQELISYASRKQPQLLILMGPFIDSDHPEIKKGAVDQS 418
Query: 66 FEDFYV 71
F+D ++
Sbjct: 419 FQDIFL 424
>gi|195112560|ref|XP_002000840.1| GI10451 [Drosophila mojavensis]
gi|193917434|gb|EDW16301.1| GI10451 [Drosophila mojavensis]
Length = 597
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R + V+AGPYT S L Y P+ L+ ++ PDVL+L GP LD H L++ LAET
Sbjct: 344 RDVHFVVAAGPYTHSTDLFYDPMHQLLKYLLEHRPDVLLLTGPFLDAEHKLVV--ELAET 401
Query: 66 FEDFYVKLIDSIVQ 79
FE F+ K+I I++
Sbjct: 402 FESFFEKMIAGIME 415
>gi|320166831|gb|EFW43730.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 649
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R LS+ +AGP++ +D LS+ PL +L EPDVLIL+GP +D HP + G L T
Sbjct: 380 RPLSIVAAAGPFSGTDDLSFAPLMELATQVGNSEPDVLILMGPFVDEQHPGVAAGELDVT 439
Query: 66 FEDFYVKLIDSIVQPL 81
FED + + ++ V L
Sbjct: 440 FEDLFREAVNDTVHKL 455
>gi|303659|dbj|BAA02746.1| DNA polymerase alpha associated subunit [Mus musculus]
Length = 600
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 12 VSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDFYV 71
V+ GPYT SD+++Y PL DLIA+ + +PDV IL GP LD H + N L FED +
Sbjct: 344 VARGPYTTSDSITYDPLLDLIAIINRDQPDVCILFGPFLDAKHEQVENCKLTSPFEDVFK 403
Query: 72 KLIDSIVQPLEKPG 85
+ + ++++ G
Sbjct: 404 QCLRTVIEGTRSSG 417
>gi|222616877|gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japonica Group]
Length = 625
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R LS ++AGPYT SD L ++PL++LI+ +++P +LIL+GP +D+ HP + G++ ++
Sbjct: 359 RVLSSVIAAGPYTTSDNLLFEPLQELISYASRKQPQLLILMGPFIDSDHPEIKKGAVDKS 418
Query: 66 FEDFYV 71
F+D ++
Sbjct: 419 FQDIFL 424
>gi|126338934|ref|XP_001379826.1| PREDICTED: DNA polymerase alpha subunit B [Monodelphis domestica]
Length = 878
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y P+ DLI + + +PDV IL+GP LD H + N L +FE+
Sbjct: 351 VLVACGPYTTSDSITYDPMMDLIGVISRDQPDVCILLGPFLDAKHEQVENCQLTISFEEV 410
Query: 70 YVKLIDSIVQ 79
+ K + SI++
Sbjct: 411 FKKCLWSIIE 420
>gi|115487992|ref|NP_001066483.1| Os12g0242900 [Oryza sativa Japonica Group]
gi|113648990|dbj|BAF29502.1| Os12g0242900, partial [Oryza sativa Japonica Group]
Length = 400
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 50/69 (72%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
+ R LS ++AGPYT SD L ++PL++LI+ +++P +LIL+GP +D+ HP + G++
Sbjct: 131 VVSRVLSSVIAAGPYTTSDNLLFEPLQELISYASRKQPQLLILMGPFIDSDHPEIKKGAV 190
Query: 63 AETFEDFYV 71
++F+D ++
Sbjct: 191 DKSFQDIFL 199
>gi|108862395|gb|ABG21942.1| DNA polymerase alpha subunit B family protein, expressed [Oryza
sativa Japonica Group]
Length = 339
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 50/69 (72%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
+ R LS ++AGPYT SD L ++PL++LI+ +++P +LIL+GP +D+ HP + G++
Sbjct: 70 VVSRVLSSVIAAGPYTTSDNLLFEPLQELISYASRKQPQLLILMGPFIDSDHPEIKKGAV 129
Query: 63 AETFEDFYV 71
++F+D ++
Sbjct: 130 DKSFQDIFL 138
>gi|108862394|gb|ABA97199.2| DNA polymerase alpha subunit B family protein, expressed [Oryza
sativa Japonica Group]
gi|215693905|dbj|BAG89104.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 368
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 50/69 (72%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
+ R LS ++AGPYT SD L ++PL++LI+ +++P +LIL+GP +D+ HP + G++
Sbjct: 99 VVSRVLSSVIAAGPYTTSDNLLFEPLQELISYASRKQPQLLILMGPFIDSDHPEIKKGAV 158
Query: 63 AETFEDFYV 71
++F+D ++
Sbjct: 159 DKSFQDIFL 167
>gi|431910281|gb|ELK13354.1| DNA polymerase alpha subunit B [Pteropus alecto]
Length = 639
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLI + +PD+ IL GP LD H + N L +FED
Sbjct: 382 VLVACGPYTTSDSITYDPLLDLITIINHDQPDICILFGPFLDAKHEQVENCLLTSSFEDV 441
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +IV+ G
Sbjct: 442 FKQCLRTIVEGTRSSG 457
>gi|355751972|gb|EHH56092.1| DNA polymerase alpha 70 kDa subunit [Macaca fascicularis]
Length = 598
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ PDV IL GP LD H + N L FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDI 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|397516918|ref|XP_003828668.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha subunit B [Pan
paniscus]
Length = 598
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ PDV IL GP LD H + N L FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDI 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|355566320|gb|EHH22699.1| DNA polymerase alpha 70 kDa subunit [Macaca mulatta]
Length = 598
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ PDV IL GP LD H + N L FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDI 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|208967074|dbj|BAG73551.1| polymerase (DNA directed) alpha 2 [synthetic construct]
Length = 598
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ PDV IL GP LD H + N L FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDI 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|20127448|ref|NP_002680.2| DNA polymerase alpha subunit B [Homo sapiens]
gi|90110415|sp|Q14181.2|DPOA2_HUMAN RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 70 kDa subunit
gi|12654999|gb|AAH01347.1| Polymerase (DNA directed), alpha 2 (70kD subunit) [Homo sapiens]
gi|12804263|gb|AAH02990.1| Polymerase (DNA directed), alpha 2 (70kD subunit) [Homo sapiens]
gi|48145591|emb|CAG33018.1| POLA2 [Homo sapiens]
gi|119594779|gb|EAW74373.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Homo sapiens]
gi|123982416|gb|ABM82949.1| polymerase (DNA directed), alpha 2 (70kD subunit) [synthetic
construct]
gi|123997079|gb|ABM86141.1| polymerase (DNA directed), alpha 2 (70kD subunit) [synthetic
construct]
Length = 598
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ PDV IL GP LD H + N L FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDI 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|114638540|ref|XP_001169495.1| PREDICTED: DNA polymerase alpha subunit B isoform 4 [Pan
troglodytes]
gi|410212336|gb|JAA03387.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Pan troglodytes]
gi|410294866|gb|JAA26033.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Pan troglodytes]
gi|410337017|gb|JAA37455.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Pan troglodytes]
Length = 598
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ PDV IL GP LD H + N L FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDI 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|410251086|gb|JAA13510.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Pan troglodytes]
Length = 598
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ PDV IL GP LD H + N L FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDI 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|195054929|ref|XP_001994375.1| GH16851 [Drosophila grimshawi]
gi|193892138|gb|EDV91004.1| GH16851 [Drosophila grimshawi]
Length = 603
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R + V+AGPYT L Y PL DL+ + PDVL+L GP +D H L+ G LAET
Sbjct: 349 RDVQFVVAAGPYTHITDLFYDPLHDLLKYLKEHRPDVLLLTGPFVDAEHKLV--GELAET 406
Query: 66 FEDFYVKLIDSIVQ 79
F+ F+ K++ I++
Sbjct: 407 FDSFFEKMVTGIME 420
>gi|388452542|ref|NP_001253937.1| DNA polymerase alpha subunit B [Macaca mulatta]
gi|383417163|gb|AFH31795.1| DNA polymerase alpha subunit B [Macaca mulatta]
gi|387541568|gb|AFJ71411.1| DNA polymerase alpha subunit B [Macaca mulatta]
Length = 598
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ PDV IL GP LD H + N L FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDI 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|402892875|ref|XP_003909632.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha subunit B
[Papio anubis]
Length = 598
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ PDV IL GP LD H + N L FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDI 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|296218739|ref|XP_002755571.1| PREDICTED: DNA polymerase alpha subunit B [Callithrix jacchus]
Length = 598
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ PDV IL GP LD H + N L FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDV 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|328769006|gb|EGF79051.1| hypothetical protein BATDEDRAFT_12741 [Batrachochytrium
dendrobatidis JAM81]
Length = 501
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQE-PDVLILIGPLLDTSHPLLLNGS 61
L +R++ + V++GP+T D+L+Y+PLE L+ ++++ PDV+IL+GP +D HPL+++G+
Sbjct: 189 LNKRTIHIVVASGPFTLVDSLTYEPLEALVVDVIEKDAPDVVILMGPFVDIDHPLIVSGN 248
Query: 62 LAETFEDFYVKLIDSIVQPLE--KPG 85
+ E +D + + + + + +PG
Sbjct: 249 VMEDVDDIFREQVAKRIDRMRDARPG 274
>gi|346466585|gb|AEO33137.1| hypothetical protein [Amblyomma maculatum]
Length = 543
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
L + V+AGP+T SDTLS++PL D A ++ +P V I++GP +D H L+ G+L + ++
Sbjct: 288 LQLVVAAGPFTTSDTLSFEPLADFTAYIIKHQPHVCIMMGPFVDCRHELIQKGNLPDEYD 347
Query: 68 DFYVKLIDSIVQPLEK 83
+ I+++ L+
Sbjct: 348 SVFQSQINALANALQN 363
>gi|242095348|ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
gi|241916387|gb|EER89531.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
Length = 626
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 48/65 (73%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R+LS ++AGPYT +D L ++PL++L++ +++P +LIL+GP +D+ HP + G++ ++
Sbjct: 360 RALSSVIAAGPYTTTDNLLFEPLQELLSYACRKQPQLLILMGPFIDSDHPDIKKGTVDQS 419
Query: 66 FEDFY 70
F D +
Sbjct: 420 FHDIF 424
>gi|193787682|dbj|BAG52888.1| unnamed protein product [Homo sapiens]
Length = 295
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ PDV IL GP LD H + N L FED
Sbjct: 39 VLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDI 98
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 99 FKQCLRTIIEGTRSSG 114
>gi|380796161|gb|AFE69956.1| DNA polymerase alpha subunit B, partial [Macaca mulatta]
Length = 297
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ PDV IL GP LD H + N L FED
Sbjct: 41 VLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDI 100
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 101 FKQCLRTIIEGTRSSG 116
>gi|405123604|gb|AFR98368.1| alpha DNA polymerase [Cryptococcus neoformans var. grubii H99]
Length = 687
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 50/72 (69%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
LS+ V+AGPYT ++ L ++P E L+ ++ PDVLIL+GP +D+ HP++ + ++ ET +
Sbjct: 399 LSLMVAAGPYTLNENLFFEPFETLVDKVLEDRPDVLILLGPFIDSQHPIIKSCAVTETPQ 458
Query: 68 DFYVKLIDSIVQ 79
+ + K I S +Q
Sbjct: 459 EIFRKQISSRLQ 470
>gi|392579381|gb|EIW72508.1| hypothetical protein TREMEDRAFT_66921 [Tremella mesenterica DSM
1558]
Length = 708
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ +AGP+T D L Y PLE L+ + + + PDVL+L+GP +D +HP + NG++ +T E+
Sbjct: 421 IMTAAGPFTLDDDLLYHPLEALVEVVIAERPDVLVLLGPFVDANHPFIANGAVLQTSEEI 480
Query: 70 YVKLIDSIVQ 79
+ + S +Q
Sbjct: 481 FKDQVGSRLQ 490
>gi|196006784|ref|XP_002113258.1| hypothetical protein TRIADDRAFT_57222 [Trichoplax adhaerens]
gi|190583662|gb|EDV23732.1| hypothetical protein TRIADDRAFT_57222 [Trichoplax adhaerens]
Length = 595
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 47/72 (65%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
+++ V+ GP+T +D L Y+PL DL+ + + Q+PD+ IL GP +D L+ G + ++E
Sbjct: 339 MNILVACGPFTTADNLLYEPLSDLLKVILNQQPDIAILCGPFVDAKQELIKQGEINISYE 398
Query: 68 DFYVKLIDSIVQ 79
D ++K + I++
Sbjct: 399 DLFIKRLSEIIE 410
>gi|354505058|ref|XP_003514589.1| PREDICTED: DNA polymerase alpha subunit B-like [Cricetulus griseus]
gi|344258643|gb|EGW14747.1| DNA polymerase alpha subunit B [Cricetulus griseus]
Length = 600
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLI + PDV IL GP LD H + N L FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLITIINHDRPDVCILFGPFLDAKHEQVENCQLTSPFEDV 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + ++++ G
Sbjct: 402 FKQCLRTVIEGTRSSG 417
>gi|194388416|dbj|BAG60176.1| unnamed protein product [Homo sapiens]
Length = 361
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ PDV IL GP LD H + N L FED
Sbjct: 134 VLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDI 193
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 194 FKQCLRTIIEGTRSSG 209
>gi|291414417|ref|XP_002723449.1| PREDICTED: DNA-directed DNA polymerase alpha 2 [Oryctolagus
cuniculus]
Length = 600
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y+PL DLI + PDV IL+GP LD H + N L FED
Sbjct: 344 VLVACGPYTTSDSITYEPLLDLITVINHDRPDVCILLGPFLDAKHEQVENCLLTSPFEDV 403
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 404 FKQCLRTIIEGTRSSG 419
>gi|149062123|gb|EDM12546.1| polymerase (DNA directed), alpha 2, isoform CRA_a [Rattus
norvegicus]
Length = 600
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLI+ PDV IL GP LD H + N L FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLISTINHDRPDVCILFGPFLDAKHEQVENCKLTSPFEDI 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + ++++ G
Sbjct: 402 FKQCLRTVIEGTRSSG 417
>gi|58261876|ref|XP_568348.1| alpha DNA polymerase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134118395|ref|XP_772211.1| hypothetical protein CNBM1300 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254819|gb|EAL17564.1| hypothetical protein CNBM1300 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230521|gb|AAW46831.1| alpha DNA polymerase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 737
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 50/72 (69%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
LS+ V+AGPYT ++ L ++P E L+ ++ PDVLIL+GP +D+ HP++ + ++ ET +
Sbjct: 449 LSLMVAAGPYTLNENLLFEPFETLVDKVLEDRPDVLILLGPFVDSQHPIIKSCAVTETPQ 508
Query: 68 DFYVKLIDSIVQ 79
+ + K I S +Q
Sbjct: 509 EIFRKQISSRLQ 520
>gi|439601|gb|AAA16459.1| DNA polymerase alpha [Homo sapiens]
Length = 598
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ PDV IL GP L++ H + N L FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLESKHEQVENCLLTSPFEDI 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|52788200|sp|O89043.2|DPOA2_RAT RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 70 kDa subunit; AltName: Full=DNA
polymerase subunit II
gi|5912572|emb|CAB56208.1| DNA polymerase alpha [Rattus norvegicus]
Length = 600
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLI+ PDV IL GP LD H + N L FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLISTINHDRPDVCILFGPFLDAKHEQVENCKLTSPFEDI 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + ++++ G
Sbjct: 402 FKQCLRTVIEGTRSSG 417
>gi|395852330|ref|XP_003798692.1| PREDICTED: DNA polymerase alpha subunit B [Otolemur garnettii]
Length = 598
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ + GPYT D+++Y PL DLIA+ PDV IL GP LD H + N L +FED
Sbjct: 342 VLAACGPYTTCDSITYDPLLDLIAIINHDRPDVCILFGPFLDAKHEQVENCLLTSSFEDV 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|351701969|gb|EHB04888.1| DNA polymerase alpha subunit B [Heterocephalus glaber]
Length = 598
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLI++ PDV IL GP LD +H + N L FED
Sbjct: 342 VLVTCGPYTTSDSITYDPLLDLISIINHDHPDVCILFGPFLDANHEQVENCLLTSPFEDV 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|426369123|ref|XP_004051546.1| PREDICTED: DNA polymerase alpha subunit B [Gorilla gorilla gorilla]
Length = 598
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD++ Y PL DLIA+ PDV IL GP LD H + N L FED
Sbjct: 342 VLVACGPYTTSDSIMYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDI 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|344295886|ref|XP_003419641.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha subunit B-like
[Loxodonta africana]
Length = 597
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DL+ + PDV IL GP LD H + N L +FED
Sbjct: 341 VLVACGPYTTSDSITYDPLLDLVTVINHDRPDVCILFGPFLDAKHEQVENCLLTSSFEDV 400
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 401 FKQCLRTIIEGTRSSG 416
>gi|449663068|ref|XP_002165302.2| PREDICTED: DNA polymerase alpha subunit B-like [Hydra
magnipapillata]
Length = 605
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 8 LSMFVSAGPYTQSD--TLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
+++V+ GP++ D TLSY PLEDL+++ +++ PD+L+++GP +D PL+ G + +T
Sbjct: 347 FTIYVACGPFSTCDETTLSYNPLEDLLSVVLKEAPDILLMLGPFVDVKQPLIERGDIDQT 406
Query: 66 FEDFY 70
FE+ +
Sbjct: 407 FEELF 411
>gi|149725407|ref|XP_001492574.1| PREDICTED: DNA polymerase alpha subunit B [Equus caballus]
Length = 598
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y+PL DLIA+ + PDV +L GP LD H + + L FED
Sbjct: 342 VLVACGPYTTSDSITYEPLLDLIAIINRDRPDVCVLFGPFLDAKHEQVESCLLTSPFEDV 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|157116632|ref|XP_001658585.1| hypothetical protein AaeL_AAEL007692 [Aedes aegypti]
gi|108876368|gb|EAT40593.1| AAEL007692-PA [Aedes aegypti]
Length = 618
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
++M +++GPYT D L Y+ L DL+ PDVLIL GP D S+PL G++AET+E
Sbjct: 368 VNMVIASGPYTDKDDLLYEKLSDLLTYCKNNCPDVLILTGPFGDISNPLF--GTIAETYE 425
Query: 68 DFYVKLIDSIV 78
+++ K+I +I+
Sbjct: 426 EYFEKIIINIM 436
>gi|3676244|emb|CAA09721.1| DNA polymerase alpha subunit II [Rattus norvegicus]
Length = 495
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLI+ PDV IL GP LD H + N L FED
Sbjct: 237 VLVACGPYTTSDSITYDPLLDLISTINHDRPDVCILFGPFLDAKHEQVENCKLTSPFEDI 296
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + ++++ G
Sbjct: 297 FKQCLRTVIEGTRSSG 312
>gi|307201565|gb|EFN81327.1| DNA polymerase subunit alpha B [Harpegnathos saltator]
Length = 470
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 52/77 (67%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETF 66
++++FV+AGP+T S+ + Y+PL DL+ EP +L+L+GP L+ +HP + +G + +T
Sbjct: 218 NVNIFVAAGPFTASNNMHYQPLWDLMEKVASDEPHILVLVGPFLEYTHPEIQDGLVKDTH 277
Query: 67 EDFYVKLIDSIVQPLEK 83
++ + K + I++ ++
Sbjct: 278 QELFEKTLTRIMESAKR 294
>gi|357160336|ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-like [Brachypodium
distachyon]
Length = 625
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 47/65 (72%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R LS ++AGPYT +D L ++PL++L++ +++P +LIL+GP +D+ HP + G++ ++
Sbjct: 359 RVLSSVIAAGPYTTTDNLLFEPLQELLSYACRKQPQLLILMGPFIDSDHPDIKRGTVDQS 418
Query: 66 FEDFY 70
F D +
Sbjct: 419 FHDIF 423
>gi|213514402|ref|NP_001133624.1| DNA polymerase subunit alpha B [Salmo salar]
gi|209154730|gb|ACI33597.1| DNA polymerase subunit alpha B [Salmo salar]
Length = 608
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
L + V+ GPYT SD L++ PL DLI + + PDV IL+GP +D+ H + + ETF+
Sbjct: 350 LMVMVACGPYTPSDGLTFDPLVDLINVIARDRPDVCILLGPFVDSKHEQIEKSLVTETFD 409
Query: 68 DFYVKLIDSIVQPLEKPG 85
+ + + SIV+ + G
Sbjct: 410 AIFSRCVGSIVEGTKGVG 427
>gi|212274797|ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea mays]
gi|194689050|gb|ACF78609.1| unknown [Zea mays]
gi|413916526|gb|AFW56458.1| hypothetical protein ZEAMMB73_686460 [Zea mays]
Length = 626
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 47/65 (72%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R+LS ++AGPYT +D + ++PL++L++ ++ P +LIL+GP +D+ HP + G++ ++
Sbjct: 360 RALSSIIAAGPYTTTDNMLFEPLQELLSYACRKPPQLLILMGPFIDSDHPDIKKGTIDQS 419
Query: 66 FEDFY 70
F D +
Sbjct: 420 FHDIF 424
>gi|189240313|ref|XP_001807778.1| PREDICTED: similar to polymerase (DNA-directed), alpha (70kD)
[Tribolium castaneum]
gi|270011548|gb|EFA07996.1| hypothetical protein TcasGA2_TC005585 [Tribolium castaneum]
Length = 539
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETF 66
+L + V+AGP+T SD L Y+PL+ L VQ +P++L+L+GP +D SH L +L ET+
Sbjct: 288 TLQIVVAAGPFTLSDNLLYEPLDSLSKYVVQFKPNLLVLMGPFVDKSHSCL--KALNETY 345
Query: 67 EDFYVKLIDSIVQPLEKPG 85
+ F+ +I +++ L+ G
Sbjct: 346 DSFFENIISGVMERLKGTG 364
>gi|413916525|gb|AFW56457.1| hypothetical protein ZEAMMB73_686460 [Zea mays]
Length = 551
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 47/65 (72%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R+LS ++AGPYT +D + ++PL++L++ ++ P +LIL+GP +D+ HP + G++ ++
Sbjct: 285 RALSSIIAAGPYTTTDNMLFEPLQELLSYACRKPPQLLILMGPFIDSDHPDIKKGTIDQS 344
Query: 66 FEDFY 70
F D +
Sbjct: 345 FHDIF 349
>gi|149575496|ref|XP_001519697.1| PREDICTED: DNA polymerase alpha subunit B, partial [Ornithorhynchus
anatinus]
Length = 439
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 10 MFVSA-GPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFED 68
M V+A GPYT SD+++Y P+ DLIA+ + PDV IL GP LD H + + L FED
Sbjct: 221 MVVAASGPYTTSDSITYDPMMDLIAVINRDRPDVCILFGPFLDAKHEQVESCQLTSPFED 280
Query: 69 FYVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 281 VFKQCLRTIIEGTRSSG 297
>gi|157124545|ref|XP_001654098.1| hypothetical protein AaeL_AAEL009905 [Aedes aegypti]
gi|108873944|gb|EAT38169.1| AAEL009905-PA, partial [Aedes aegypti]
Length = 513
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
+ LSM +++GPYT D L Y+ L DL+ PDVLIL GP D S+PL ++AET
Sbjct: 260 KELSMVIASGPYTAKDDLLYEKLSDLLTYCKNNCPDVLILTGPFGDISNPLF--STIAET 317
Query: 66 FEDFYVKLIDSIV 78
+++++ KLI +I+
Sbjct: 318 YDEYFEKLIINIM 330
>gi|348564960|ref|XP_003468272.1| PREDICTED: DNA polymerase alpha subunit B-like [Cavia porcellus]
Length = 598
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLI++ PDV IL GP LD H + N + FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLISIINHDRPDVCILFGPFLDAKHEQVENCLVTSAFEDV 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + ++++ G
Sbjct: 402 FKQCLRTLIEGTRSSG 417
>gi|322801402|gb|EFZ22063.1| hypothetical protein SINV_03428 [Solenopsis invicta]
Length = 521
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 52/79 (65%)
Query: 1 MTLTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
+ + + +++FV+AGP+T + ++Y+PL DL+ EP +LILIGPLL+ +HP + N
Sbjct: 212 IPMIKSRINIFVAAGPFTAFNNMNYQPLWDLMEKVASDEPQLLILIGPLLEYTHPDIQNN 271
Query: 61 SLAETFEDFYVKLIDSIVQ 79
+ +T+ + Y ++ I++
Sbjct: 272 TSNDTYREQYETILTKIMK 290
>gi|444724504|gb|ELW65107.1| Cdc42 effector protein 2 [Tupaia chinensis]
Length = 576
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DL+A+ PDV IL GP LD H + N L FED
Sbjct: 141 VLVACGPYTTSDSITYDPLLDLLAIINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDV 200
Query: 70 YVKLIDSIVQ 79
+ + + ++++
Sbjct: 201 FKQCLRTVIE 210
>gi|355712602|gb|AES04403.1| polymerase , alpha 2 [Mustela putorius furo]
Length = 594
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLIA+ + PDV IL+GP LD H + + L FED
Sbjct: 338 VLVACGPYTTSDSITYDPLLDLIAVINRDLPDVCILLGPFLDAKHEQVESCLLTSPFEDI 397
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 398 FKQCLRTIIEGTRSSG 413
>gi|325180869|emb|CCA15279.1| DNA polymerase subunit alpha B putative [Albugo laibachii Nc14]
Length = 624
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 48/69 (69%), Gaps = 5/69 (7%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG-----SL 62
L +F+++GP+T +D ++++PL+DL+ + +++ P V+ILIGP +D SHP +G +
Sbjct: 328 LRIFLASGPFTTADNIAFQPLDDLLRIVIKERPHVVILIGPFVDASHPSFKDGQAMYDGM 387
Query: 63 AETFEDFYV 71
+FED ++
Sbjct: 388 LLSFEDIFI 396
>gi|391339837|ref|XP_003744253.1| PREDICTED: DNA polymerase alpha subunit B-like [Metaseiulus
occidentalis]
Length = 541
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 5 RRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAE 64
+ L + V AGPYT DT+SY+P D I +++EPD+ IL+GP +D +H L+ +L
Sbjct: 290 KSGLRILVVAGPYTTLDTMSYEPYHDFIEQLIREEPDLAILVGPFVDANHK-KLSTNLDC 348
Query: 65 TFEDFYVKLI 74
+FE+++++LI
Sbjct: 349 SFEEYFLQLI 358
>gi|426252020|ref|XP_004019717.1| PREDICTED: DNA polymerase alpha subunit B [Ovis aries]
Length = 600
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD++++ PL DLI + + PDV IL GP LD H + + L +FED
Sbjct: 344 VLVACGPYTTSDSITFDPLLDLITIINRDRPDVCILFGPFLDAKHEQVESCLLTSSFEDV 403
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 404 FKQCLRTIIEGTRSSG 419
>gi|296471438|tpg|DAA13553.1| TPA: DNA polymerase alpha subunit B [Bos taurus]
Length = 600
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD++++ PL DLI + + PDV IL GP LD H + + L +FED
Sbjct: 344 VLVACGPYTTSDSITFDPLLDLITIINRDRPDVCILFGPFLDAKHEQVESCLLTSSFEDV 403
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 404 FKQCLRTIIEGTRSSG 419
>gi|384248689|gb|EIE22172.1| DNA polymerase alpha, subunit B [Coccomyxa subellipsoidea C-169]
Length = 552
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
+SM V+ GP+T S+ L + PL +L+ PDVL+LIGP +D H L+ NGSL TFE
Sbjct: 262 VSMAVAVGPFTTSEDLEFAPLAELLGSCRASRPDVLLLIGPFVDVEHALISNGSLDITFE 321
Query: 68 DFY 70
+ +
Sbjct: 322 ELF 324
>gi|255708460|ref|NP_001019713.2| DNA polymerase alpha subunit B [Bos taurus]
Length = 600
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD++++ PL DLI + + PDV IL GP LD H + + L +FED
Sbjct: 344 VLVACGPYTTSDSITFDPLLDLITIINRDRPDVCILFGPFLDAKHEQVESCLLTSSFEDV 403
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 404 FKQCLRTIIEGTRSSG 419
>gi|440907401|gb|ELR57555.1| DNA polymerase alpha subunit B [Bos grunniens mutus]
Length = 604
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD++++ PL DLI + + PDV IL GP LD H + + L +FED
Sbjct: 344 VLVACGPYTTSDSITFDPLLDLITIINRDRPDVCILFGPFLDAKHEQVESCLLTSSFEDV 403
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 404 FKQCLRTIIEGTRSSG 419
>gi|75057604|sp|Q58D13.1|DPOA2_BOVIN RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 70 kDa subunit
gi|61554916|gb|AAX46631.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Bos taurus]
Length = 604
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD++++ PL DLI + + PDV IL GP LD H + + L +FED
Sbjct: 344 VLVACGPYTTSDSITFDPLLDLITIINRDRPDVCILFGPFLDAKHEQVESCLLTSSFEDV 403
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 404 FKQCLRTIIEGTRSSG 419
>gi|307110154|gb|EFN58390.1| hypothetical protein CHLNCDRAFT_10114, partial [Chlorella
variabilis]
Length = 311
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R + + +AGP+T S+ L Y PL L+ +PDVL+L+GP +D HPL+ G L ET
Sbjct: 94 RGVLVVAAAGPFTSSEDLEYAPLGALLDYCAGAKPDVLLLVGPFVDEEHPLVRGGLLEET 153
Query: 66 FEDFY 70
F+D Y
Sbjct: 154 FDDIY 158
>gi|321265257|ref|XP_003197345.1| alpha DNA polymerase [Cryptococcus gattii WM276]
gi|317463824|gb|ADV25558.1| Alpha DNA polymerase, putative [Cryptococcus gattii WM276]
Length = 718
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 48/72 (66%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
LS+ V+AGPYT ++ L ++P E L+ ++ PDV IL+GP +D+ HP++ + ++ ET +
Sbjct: 430 LSLVVAAGPYTVNENLLFEPFETLVDKVLEDRPDVFILLGPFIDSQHPIIKSCAVTETPQ 489
Query: 68 DFYVKLIDSIVQ 79
+ + K I +Q
Sbjct: 490 EIFRKQISRRLQ 501
>gi|148222523|ref|NP_001086972.1| polymerase (DNA directed), alpha 2, accessory subunit [Xenopus
laevis]
gi|50414931|gb|AAH77841.1| MGC80532 protein [Xenopus laevis]
Length = 598
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ + GP+T SDT++Y L+DLI + + PD+ IL+GP LD H + N L TFED
Sbjct: 342 VITACGPFTTSDTITYDALKDLIDIVNRDRPDICILLGPFLDAKHEQIENLQLTVTFEDV 401
Query: 70 YVKLIDSIVQ 79
+ + + I++
Sbjct: 402 FKRCLKMIIE 411
>gi|299117538|emb|CBN75382.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 696
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 40/55 (72%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
++LS+F +AGP+T SD+L Y+PL DL+ PDV++L+GP +D+ HP + +G
Sbjct: 370 KALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDSEHPKVASG 424
>gi|326487588|dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 625
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 46/65 (70%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R LS ++AGP+T +D L ++PL++L++ +++P +LIL+GP +D+ HP + G+ ++
Sbjct: 359 RVLSSVIAAGPFTTTDNLLFEPLQELLSYACRKQPQLLILMGPFIDSDHPEIKKGTSDQS 418
Query: 66 FEDFY 70
F D +
Sbjct: 419 FHDIF 423
>gi|307166257|gb|EFN60471.1| DNA polymerase subunit alpha B [Camponotus floridanus]
Length = 308
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 49/76 (64%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
+++FV+AGP+T Y+PL DL+ EP VLIL+GP L+ +HP + N + +T +
Sbjct: 58 INIFVAAGPFTALSNTLYQPLWDLMEKIASDEPHVLILVGPFLEYTHPEVQNNLIRDTHQ 117
Query: 68 DFYVKLIDSIVQPLEK 83
+F+ K++ I++ +K
Sbjct: 118 EFFEKILTRIMESTKK 133
>gi|291222797|ref|XP_002731400.1| PREDICTED: MGC80532 protein-like [Saccoglossus kowalevskii]
Length = 601
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG--SLAET 65
L +AGPY SD+LS+ PL DLI + ++++PDV IL GP +D+ H ++NG T
Sbjct: 343 LYTLTTAGPYFTSDSLSFDPLNDLIKVILKEKPDVCILFGPFVDSRHEHVVNGLEGTDMT 402
Query: 66 FEDFYVKLI 74
+E+ + K+I
Sbjct: 403 YEELFSKMI 411
>gi|357463079|ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago truncatula]
gi|355490869|gb|AES72072.1| DNA polymerase alpha subunit B [Medicago truncatula]
Length = 616
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 46/68 (67%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
+R LSM ++AGP+T +D L ++PL +L+A ++ P +L+L+GP +D+ HP + G++
Sbjct: 350 CNQRELSMIIAAGPFTTTDNLFFEPLVELLAYAKRRPPQLLVLLGPFIDSEHPDIKKGTV 409
Query: 63 AETFEDFY 70
F++ +
Sbjct: 410 DRDFDEIF 417
>gi|311247333|ref|XP_003122587.1| PREDICTED: DNA polymerase alpha subunit B [Sus scrofa]
Length = 597
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++++PL DLI + + PDV IL GP LD H + + L FED
Sbjct: 342 VLVACGPYTTSDSIAFEPLLDLITVINRDRPDVCILFGPFLDAKHEQVESCLLTSPFEDV 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + +I++ G
Sbjct: 402 FKQCLRTIIEGTRSSG 417
>gi|388504218|gb|AFK40175.1| unknown [Medicago truncatula]
Length = 447
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 46/68 (67%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
+R LSM ++AGP+T +D L ++PL +L+A ++ P +L+L+GP +D+ HP + G++
Sbjct: 350 CNQRELSMIIAAGPFTTTDNLFFEPLVELLAYAKRRPPQLLVLLGPFIDSEHPDIKKGTV 409
Query: 63 AETFEDFY 70
F++ +
Sbjct: 410 DRDFDEIF 417
>gi|345489814|ref|XP_001601850.2| PREDICTED: DNA polymerase alpha subunit B-like [Nasonia
vitripennis]
Length = 605
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
L + V+AGP+T S+ L Y+PL +L+ + EP +L+LIGP LD +HP + L ++
Sbjct: 355 LKIIVAAGPFTHSNDLDYRPLWELMDKVAEDEPHLLVLIGPFLDYNHPNFQDDELVVPYQ 414
Query: 68 DFYVKLIDSI 77
+++ +LI +
Sbjct: 415 EYFDRLISRV 424
>gi|332023529|gb|EGI63765.1| DNA polymerase alpha subunit B [Acromyrmex echinatior]
Length = 573
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGS 61
TL R +++FV+AGP+T S + Y+ L DL+ EP VLILIGP L+ +HP + +
Sbjct: 318 TLESR-VNIFVAAGPFTPSSNMHYQALWDLMERVASDEPHVLILIGPFLEYTHPEIQDNV 376
Query: 62 LAETFEDFYVKLIDSIVQ 79
+ +T ++ + K++ I++
Sbjct: 377 IKDTHQELFEKILTRIME 394
>gi|67514566|ref|NP_445932.2| DNA polymerase alpha subunit B [Rattus norvegicus]
gi|66910546|gb|AAH97300.1| Polymerase (DNA directed), alpha 2 [Rattus norvegicus]
Length = 600
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ V+ GPYT SD+++Y PL DLI+ DV IL GP LD H + N L FED
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLISTINHDRLDVCILFGPFLDAKHEQVENCKLTSPFEDI 401
Query: 70 YVKLIDSIVQPLEKPG 85
+ + + ++++ G
Sbjct: 402 FKQCLRTVIEGTRSSG 417
>gi|195449186|ref|XP_002071963.1| GK22573 [Drosophila willistoni]
gi|194168048|gb|EDW82949.1| GK22573 [Drosophila willistoni]
Length = 616
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R L V+AGP+T S L Y PL DL+ PDVL+L GP ++ H ++ LAE
Sbjct: 362 RELQFVVAAGPFTHSTDLFYDPLHDLLKYLKDHRPDVLLLTGPFVEAEHKMV--AELAEG 419
Query: 66 FEDFYVKLIDSIVQ 79
F+ F+ K+I I++
Sbjct: 420 FDSFFEKMIVGIME 433
>gi|170030754|ref|XP_001843253.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167867929|gb|EDS31312.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 629
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
+ L M + A P+T D L Y L DL+A + PDVLIL GP TS+ L ++AE+
Sbjct: 376 KPLHMVIGAAPFTDKDNLQYDKLSDLLAYCAENNPDVLILTGPFGSTSNDTLF-LTIAES 434
Query: 66 FEDFYVKLIDSIV 78
FE+++ K++ +IV
Sbjct: 435 FEEYFEKIMANIV 447
>gi|308809287|ref|XP_003081953.1| DNA polymerase alpha subunit B family (ISS) [Ostreococcus tauri]
gi|116060420|emb|CAL55756.1| DNA polymerase alpha subunit B family (ISS) [Ostreococcus tauri]
Length = 650
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 5 RRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAE 64
+R + V++GP++ S L Y+PL DL+ +++PD L+L GPLLD + L+ +G L E
Sbjct: 378 KRGAEVIVASGPFSCSSNLRYEPLHDLLEYVREEKPDALVLCGPLLDAENALVKSGDLGE 437
Query: 65 --TFEDFYVKLIDSIVQPLEKPG 85
T+ D K++ + L + G
Sbjct: 438 KFTYYDVAAKVVAKLEDELRERG 460
>gi|52346026|ref|NP_001005060.1| DNA-directed DNA polymerase alpha 2 [Xenopus (Silurana) tropicalis]
gi|49903509|gb|AAH76954.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Xenopus
(Silurana) tropicalis]
Length = 597
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ + GP+T SDT++Y L+DLI + + PD+ IL+GP LD H + N L TFED
Sbjct: 341 VITACGPFTTSDTITYDALKDLIDVLNRDCPDICILLGPFLDAKHEQIENLQLTVTFEDV 400
Query: 70 YVKLIDSIVQ 79
+ + + I++
Sbjct: 401 FKRCLKMIIE 410
>gi|452819415|gb|EME26474.1| DNA polymerase alpha subunit B [Galdieria sulphuraria]
Length = 638
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 47/74 (63%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R + + V++GPYT S L Y PL+ L+ ++PD++IL+GP LD +H ++ NG +
Sbjct: 370 REMQILVASGPYTISTNLRYDPLKRLLNKVETKKPDLVILVGPFLDENHRVVENGPTEVS 429
Query: 66 FEDFYVKLIDSIVQ 79
+ED K + ++++
Sbjct: 430 YEDIMAKRVGTLLE 443
>gi|89268970|emb|CAJ82570.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Xenopus
(Silurana) tropicalis]
Length = 597
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
+ + GP+T SDT++Y L+DLI + + PD+ IL+GP LD H + N L TFED
Sbjct: 341 VITACGPFTTSDTITYDALKDLIDVLNRDCPDICILLGPFLDAKHEQIENLQLTVTFEDV 400
Query: 70 YVKLIDSIVQ 79
+ + + I++
Sbjct: 401 FKRCLKMIIE 410
>gi|159463398|ref|XP_001689929.1| DNA polymerase alpha subunit two [Chlamydomonas reinhardtii]
gi|158283917|gb|EDP09667.1| DNA polymerase alpha subunit two [Chlamydomonas reinhardtii]
Length = 722
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
LS+ V+AGP+ SD LSY PLE+L+A P VL+L+GP +D HP L +GS T E
Sbjct: 436 LSLVVAAGPFCLSDDLSYSPLEELLAACSASPPGVLMLLGPFVDAEHPGLASGSADRTAE 495
Query: 68 DFY 70
+
Sbjct: 496 AVF 498
>gi|170030752|ref|XP_001843252.1| DNA polymerase subunit alpha B [Culex quinquefasciatus]
gi|167867928|gb|EDS31311.1| DNA polymerase subunit alpha B [Culex quinquefasciatus]
Length = 417
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
+ L M + A P+T D L Y L DL+A + PDVLIL GP TS+ L ++AE+
Sbjct: 164 KPLHMVIGAAPFTDKDNLQYDKLSDLLAYCAENNPDVLILTGPFGSTSNDTLF-LTIAES 222
Query: 66 FEDFYVKLIDSIV 78
FE+++ K++ +IV
Sbjct: 223 FEEYFEKIMANIV 235
>gi|302850345|ref|XP_002956700.1| hypothetical protein VOLCADRAFT_107349 [Volvox carteri f.
nagariensis]
gi|300258061|gb|EFJ42302.1| hypothetical protein VOLCADRAFT_107349 [Volvox carteri f.
nagariensis]
Length = 1377
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHP-LLLNGSLAETF 66
LS+ V+AGPY S+ LSY PLE+L++ PDVL+L+GP +D HP LL AE+F
Sbjct: 467 LSLVVAAGPYCLSEDLSYSPLEELLSYCNAHPPDVLLLLGPFVDQEHPGLLAADRTAESF 526
>gi|401884944|gb|EJT49076.1| alpha DNA polymerase [Trichosporon asahii var. asahii CBS 2479]
Length = 495
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
+S++ AGPYT + L Y+PL+ L+ + + PD +I++GP +D HP + +G+L +T
Sbjct: 208 MSIYSCAGPYTLDNNLEYEPLDALVDVVCDERPDAVIMLGPFVDAHHPAIASGALRQTPV 267
Query: 68 DFYVKLIDSIVQPL--EKPG 85
+ + + I S + + E PG
Sbjct: 268 ELFRQQIASRLARINEESPG 287
>gi|406694680|gb|EKC98004.1| alpha DNA polymerase [Trichosporon asahii var. asahii CBS 8904]
Length = 495
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
+S++ AGPYT + L Y+PL+ L+ + + PD +I++GP +D HP + +G+L +T
Sbjct: 208 MSIYSCAGPYTLDNNLEYEPLDALVDVVCDERPDAVIMLGPFVDAHHPAIASGALRQTPV 267
Query: 68 DFYVKLIDSIVQPL--EKPG 85
+ + + I S + + E PG
Sbjct: 268 ELFRQQIASRLARINEESPG 287
>gi|225425850|ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
gi|297738371|emb|CBI27572.3| unnamed protein product [Vitis vinifera]
Length = 623
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 45/63 (71%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
LS+ V+AGP+T +D L ++PL +L+A ++ P +LIL+GP +D+ HP + G++ +F+
Sbjct: 358 LSLMVAAGPFTTTDNLLFEPLTELLAYARRKMPQLLILLGPFVDSEHPEIRKGTVDRSFD 417
Query: 68 DFY 70
+ +
Sbjct: 418 EIF 420
>gi|388579274|gb|EIM19600.1| DNA polymerase alpha, subunit B [Wallemia sebi CBS 633.66]
Length = 560
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
+S+ V+AGPYT L Y+P + L+ +++PDV+IL+GP +D +HP++ G + E
Sbjct: 264 MSVIVAAGPYTLDSNLDYEPFDALMTQVERKQPDVVILLGPFVDANHPMIKKGEVDLLTE 323
Query: 68 DFYVKLIDS 76
D + I S
Sbjct: 324 DLFKMRIGS 332
>gi|384488367|gb|EIE80547.1| hypothetical protein RO3G_05252 [Rhizopus delemar RA 99-880]
Length = 512
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 44/70 (62%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
+ + + +AGP+T LS+KPLE LI + +++ PD+++L+GP + HPL+ G +
Sbjct: 299 KPIEIITAAGPFTLDGDLSFKPLESLIQMCMEERPDIVLLMGPFVSAKHPLIAKGKITTL 358
Query: 66 FEDFYVKLID 75
ED + + ++
Sbjct: 359 PEDLFREQVE 368
>gi|167537209|ref|XP_001750274.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771264|gb|EDQ84933.1| predicted protein [Monosiga brevicollis MX1]
Length = 952
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
++L + V+ GP++ SD L Y+PL DL+ + PDVLIL+GP +D + + L +T
Sbjct: 337 QALDIMVATGPFSTSDNLGYQPLIDLLVVVENNAPDVLILLGPFIDIENKKVERADLDQT 396
Query: 66 FEDFYVKLIDSIVQPLEKPGH 86
F + ++I+ + +E H
Sbjct: 397 FTQLFDEMIEKVWAKVEPLSH 417
>gi|12324682|gb|AAG52305.1|AC011020_12 putative DNA polymerase alpha subunit [Arabidopsis thaliana]
Length = 620
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 45/69 (65%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGS 61
+ + +S +++GP+T SD L ++PL +L+A ++ P +L+L+GP +D+ HP + G+
Sbjct: 353 SCQKSEVSFIIASGPFTTSDNLLFEPLNELLAYAKRKPPQLLVLLGPFVDSEHPEIKKGA 412
Query: 62 LAETFEDFY 70
+ TF + +
Sbjct: 413 VDATFNEIF 421
>gi|11072016|gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]
Length = 803
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 45/69 (65%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGS 61
+ + +S +++GP+T SD L ++PL +L+A ++ P +L+L+GP +D+ HP + G+
Sbjct: 371 SCQKSEVSFIIASGPFTTSDNLLFEPLNELLAYAKRKPPQLLVLLGPFVDSEHPEIKKGA 430
Query: 62 LAETFEDFY 70
+ TF + +
Sbjct: 431 VDATFNEIF 439
>gi|30697540|ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana]
gi|332196552|gb|AEE34673.1| DNA polymerase alpha 2 [Arabidopsis thaliana]
Length = 620
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 45/69 (65%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGS 61
+ + +S +++GP+T SD L ++PL +L+A ++ P +L+L+GP +D+ HP + G+
Sbjct: 353 SCQKSEVSFIIASGPFTTSDNLLFEPLNELLAYAKRKPPQLLVLLGPFVDSEHPEIKKGA 412
Query: 62 LAETFEDFY 70
+ TF + +
Sbjct: 413 VDATFNEIF 421
>gi|26452176|dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidopsis thaliana]
gi|29028994|gb|AAO64876.1| At1g67630 [Arabidopsis thaliana]
Length = 620
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 45/69 (65%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGS 61
+ + +S +++GP+T SD L ++PL +L+A ++ P +L+L+GP +D+ HP + G+
Sbjct: 353 SCQKSEVSFIIASGPFTTSDNLLFEPLNELLAYAKRKPPQLLVLLGPFVDSEHPEIKKGA 412
Query: 62 LAETFEDFY 70
+ TF + +
Sbjct: 413 VDATFNEIF 421
>gi|297841461|ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
lyrata]
gi|297334453|gb|EFH64871.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
lyrata]
Length = 619
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 45/69 (65%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGS 61
+ R +S +++GP+T SD L ++PL +L++ ++ P +L+L+GP +D+ HP + G+
Sbjct: 352 SCERSEVSFIIASGPFTTSDNLLFEPLNELLSYAKRKPPQLLVLLGPFVDSEHPEIKKGA 411
Query: 62 LAETFEDFY 70
+ TF + +
Sbjct: 412 VDATFSEIF 420
>gi|170576661|ref|XP_001893716.1| DNA polymerase alpha subunit B family protein [Brugia malayi]
gi|158600101|gb|EDP37436.1| DNA polymerase alpha subunit B family protein [Brugia malayi]
Length = 581
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
L ++ + GP+T S TLSY+ L DL+ L ++ P++LILIGP +D + P++ + T+E
Sbjct: 315 LHVWCACGPFTSSKTLSYEQLCDLMELVKKERPNILILIGPFIDRTSPVVKSPQCCYTYE 374
Query: 68 DFYVKLIDSI 77
D L+ I
Sbjct: 375 DLMNMLLAKI 384
>gi|302794414|ref|XP_002978971.1| hypothetical protein SELMODRAFT_110038 [Selaginella moellendorffii]
gi|300153289|gb|EFJ19928.1| hypothetical protein SELMODRAFT_110038 [Selaginella moellendorffii]
Length = 590
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
T T + L M V++GP+T SD LS++PL +L+A + P+VL+L+GP +D HP + G
Sbjct: 315 TQTPQPLHMIVASGPFTTSDNLSFEPLMELLAYARNKRPNVLLLMGPFVDAEHPHVKQG 373
>gi|302824727|ref|XP_002994004.1| hypothetical protein SELMODRAFT_138015 [Selaginella moellendorffii]
gi|300138166|gb|EFJ04944.1| hypothetical protein SELMODRAFT_138015 [Selaginella moellendorffii]
Length = 590
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
T T + L M V++GP+T SD LS++PL +L+A + P+VL+L+GP +D HP + G
Sbjct: 315 TQTPQPLHMIVASGPFTTSDNLSFEPLMELLAYARNKRPNVLLLMGPFVDAEHPHVKQG 373
>gi|449439345|ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
gi|449486914|ref|XP_004157440.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
Length = 622
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 45/67 (67%)
Query: 4 TRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLA 63
T LSM +++GPYT +D L ++PL +L+A ++ P +LIL+GP +D+ H + G++
Sbjct: 354 TPSELSMIIASGPYTTTDNLLFEPLTELLAYAKRKVPQLLILLGPFVDSEHSDIKRGTVE 413
Query: 64 ETFEDFY 70
+FE+ +
Sbjct: 414 MSFEEIF 420
>gi|449301784|gb|EMC97793.1| hypothetical protein BAUCODRAFT_67553 [Baudoinia compniacensis UAMH
10762]
Length = 669
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R LSM V++GPYT S+ PL L+A +Q DVL+L GP LD HP++ +G
Sbjct: 358 RPLSMLVASGPYTTDIDFSFAPLHALLATAKEQNTDVLVLAGPFLDLEHPVVASGD---- 413
Query: 66 FED 68
FED
Sbjct: 414 FED 416
>gi|168039083|ref|XP_001772028.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676629|gb|EDQ63109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 635
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%)
Query: 5 RRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAE 64
R+ + +AGP+T +D L+Y+PL +L A + P++LIL+GP +D+ HP + G++ +
Sbjct: 352 RQYTRIVAAAGPFTTNDNLAYEPLVELFAYAKKVRPNLLILMGPFVDSEHPQIKQGTVGK 411
Query: 65 TFEDFYVKLIDSIVQ 79
F + + I V+
Sbjct: 412 LFSHIFQEEIRMRVE 426
>gi|356538103|ref|XP_003537544.1| PREDICTED: DNA polymerase alpha subunit B-like [Glycine max]
Length = 605
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 49/75 (65%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
+R LSM ++AGP+T +D L ++PL +L+ + P +L+L+GP +D+ HP + G++
Sbjct: 346 CKQRKLSMIIAAGPFTTTDNLLFEPLIELLKHAKLRPPQLLVLLGPFVDSEHPDIKKGTV 405
Query: 63 AETFEDFYVKLIDSI 77
+F++ + +++ +
Sbjct: 406 DTSFDEIFEEILKKL 420
>gi|326436074|gb|EGD81644.1| hypothetical protein PTSG_02360 [Salpingoeca sp. ATCC 50818]
Length = 651
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETF 66
++++ ++AGP+T + L+Y PL+D +A Q P+V+I+IGP + HPL+ E+F
Sbjct: 386 AVNVMMAAGPFTTNQDLTYAPLDDFLAKVSQTRPEVVIVIGPFVHDQHPLITGCEFDESF 445
Query: 67 ED---FYVKLIDSIVQPL 81
++ F ++ I +V L
Sbjct: 446 DEVLTFVMEKITGVVSSL 463
>gi|242083288|ref|XP_002442069.1| hypothetical protein SORBIDRAFT_08g009080 [Sorghum bicolor]
gi|241942762|gb|EES15907.1| hypothetical protein SORBIDRAFT_08g009080 [Sorghum bicolor]
Length = 157
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 38/50 (76%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHP 55
R LS ++AGPYT++D L ++PL++L++ +++P +LIL GP +D+ HP
Sbjct: 89 RELSSVITAGPYTRTDNLLFEPLQELLSYACRKQPQLLILTGPFIDSDHP 138
>gi|452985626|gb|EME85382.1| hypothetical protein MYCFIDRAFT_42760 [Pseudocercospora fijiensis
CIRAD86]
Length = 661
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R LSM V++GPYT + LS+ PL L+ ++ DV++LIGP LD HP++ +G
Sbjct: 354 RPLSMLVASGPYTTENDLSFAPLYTLLEKAERERTDVVVLIGPFLDLEHPVIASGD---- 409
Query: 66 FED 68
FED
Sbjct: 410 FED 412
>gi|119174579|ref|XP_001239649.1| hypothetical protein CIMG_09270 [Coccidioides immitis RS]
gi|392869843|gb|EAS28372.2| DNA polymerase alpha/primase associated subunit [Coccidioides
immitis RS]
Length = 657
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ V++GPYT D L+++PL +L A +Q D L+L GP LD HPL+ G
Sbjct: 363 LNILVASGPYTTDDNLNFEPLNELCAKAAEQSIDTLVLTGPFLDIEHPLIATG 415
>gi|303314407|ref|XP_003067212.1| DNA polymerase alpha subunit B family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240106880|gb|EER25067.1| DNA polymerase alpha subunit B family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320037495|gb|EFW19432.1| DNA polymerase alpha/primase associated subunit [Coccidioides
posadasii str. Silveira]
Length = 657
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ V++GPYT D L+++PL +L A +Q D L+L GP LD HPL+ G
Sbjct: 363 LNILVASGPYTTDDNLNFEPLNELCAKAAEQSIDTLVLTGPFLDIEHPLIATG 415
>gi|405963161|gb|EKC28759.1| DNA polymerase alpha subunit B [Crassostrea gigas]
Length = 607
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 44/68 (64%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
++ +++ ++AGP++ SD LS++PL DL+ + +PDV+IL+GP +D + L+ NG
Sbjct: 339 ISSNDMTVLIAAGPFSTSDNLSFEPLADLVKHIRKDKPDVVILMGPFVDLKNDLIENGKG 398
Query: 63 AETFEDFY 70
+D +
Sbjct: 399 ISPLDDIF 406
>gi|402593974|gb|EJW87901.1| DNA polymerase alpha subunit B family protein [Wuchereria
bancrofti]
Length = 598
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
L ++ + GP+T S TLSY+ L DL+ L ++ P++LILIGP +D + P++ + T++
Sbjct: 332 LHVWCACGPFTSSKTLSYEQLCDLMELVKKERPNILILIGPFIDRTSPVVKSPQCCYTYD 391
Query: 68 DFYVKLIDSI 77
D L+ I
Sbjct: 392 DLMNMLLAKI 401
>gi|332249812|ref|XP_003274050.1| PREDICTED: DNA polymerase alpha subunit B [Nomascus leucogenys]
Length = 582
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
+ V+ GPYT SD+++Y PL DLIA+ PDV IL GP LD H + +G
Sbjct: 328 VLVACGPYTTSDSITYDPLLDLIAVVNHDRPDVCILFGPFLDAKHEQVEDG 378
>gi|312068913|ref|XP_003137436.1| DNA polymerase alpha subunit B family protein [Loa loa]
Length = 608
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
L ++ + GP++ S TLSY+ L DLI L ++ P++LILIGP +D + P++ + T++
Sbjct: 347 LHVWCACGPFSSSKTLSYEQLCDLIELVRKERPNILILIGPFIDRTSPVVKSPQCCYTYD 406
Query: 68 DFYVKLIDSIVQPL 81
D L+ I + L
Sbjct: 407 DVMEMLLTKIGEAL 420
>gi|393909132|gb|EFO26626.2| DNA polymerase alpha subunit B family protein [Loa loa]
Length = 592
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
L ++ + GP++ S TLSY+ L DLI L ++ P++LILIGP +D + P++ + T++
Sbjct: 331 LHVWCACGPFSSSKTLSYEQLCDLIELVRKERPNILILIGPFIDRTSPVVKSPQCCYTYD 390
Query: 68 DFYVKLIDSIVQPL 81
D L+ I + L
Sbjct: 391 DVMEMLLTKIGEAL 404
>gi|356569195|ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-like [Glycine max]
Length = 606
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 47/75 (62%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
R LSM ++AGP+T +D L ++PL L+ + P +L+L+GP +D+ HP + G++
Sbjct: 347 CKERELSMIIAAGPFTTTDNLLFEPLIALLTHAKLRPPQLLVLLGPFVDSEHPDIKKGTV 406
Query: 63 AETFEDFYVKLIDSI 77
+F++ + +++ +
Sbjct: 407 DRSFDEIFEEILKKL 421
>gi|121713938|ref|XP_001274580.1| DNA polymerase alpha/primase associated subunit [Aspergillus
clavatus NRRL 1]
gi|119402733|gb|EAW13154.1| DNA polymerase alpha/primase associated subunit [Aspergillus
clavatus NRRL 1]
Length = 668
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++F+++GPYT D L ++PL+++ + D +L+GP LD HPLL +G L
Sbjct: 371 LNVFIASGPYTADDNLGFEPLQEICQKAAESYADSFVLMGPFLDIEHPLLASGDL 425
>gi|290982320|ref|XP_002673878.1| DNA polymerase alpha subunit B [Naegleria gruberi]
gi|284087465|gb|EFC41134.1| DNA polymerase alpha subunit B [Naegleria gruberi]
Length = 544
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 5 RRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAE 64
++ + + V+ GP+T + Y PL++LI L EP+VL+L+GP L + L+ +G + E
Sbjct: 281 KKKIKIMVACGPFTLQHNVLYDPLKNLITLVETNEPNVLVLVGPFLSEDNALVKSGFMDE 340
Query: 65 TFEDFY 70
TFE +
Sbjct: 341 TFESTF 346
>gi|440635697|gb|ELR05616.1| hypothetical protein GMDG_01806 [Geomyces destructans 20631-21]
Length = 669
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ + AGPYT D L ++PL L + D LIL+GP LDT HPLL +G
Sbjct: 374 LNILIGAGPYTTDDNLDFEPLHALCSQAADTYADALILVGPFLDTEHPLLASG 426
>gi|324508966|gb|ADY43781.1| DNA polymerase alpha subunit B [Ascaris suum]
Length = 607
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 50/75 (66%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
L ++ +AGP+T +DTLSY+ L DL+ L ++ P VL+L+GP++D + +L+ ++ TF
Sbjct: 339 LHVWCAAGPFTSADTLSYEQLFDLLELAKKERPHVLVLMGPIVDRTSAAVLSPHVSLTFT 398
Query: 68 DFYVKLIDSIVQPLE 82
+ LI ++ + +E
Sbjct: 399 ELLENLILNVSKMME 413
>gi|400600867|gb|EJP68535.1| DNA polymerase alpha/epsilon subunit B [Beauveria bassiana ARSEF
2860]
Length = 681
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 31/53 (58%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
LSM +AGPYT D L ++PL L A DVL+L GP LD HPL+ G
Sbjct: 381 LSMLYAAGPYTADDNLDFEPLHALCAEAADTYADVLVLTGPFLDVDHPLVATG 433
>gi|430812479|emb|CCJ30096.1| unnamed protein product [Pneumocystis jirovecii]
Length = 629
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
+FV++GPYT +D + ++PL +L +++PDV I IGP LD HPL+ G+
Sbjct: 350 IFVASGPYTVNDNILFEPLTELCNKIQEEKPDVSIFIGPFLDIRHPLISTGNF 402
>gi|425772210|gb|EKV10621.1| DNA polymerase alpha/primase associated subunit [Penicillium
digitatum Pd1]
gi|425777487|gb|EKV15659.1| DNA polymerase alpha/primase associated subunit [Penicillium
digitatum PHI26]
Length = 657
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ ++AGPYT D L ++PL++L + D L+L+GP LD HPLL +G
Sbjct: 363 LNVMIAAGPYTADDNLDFEPLQELCQKAAENYADSLVLMGPFLDIEHPLLASG 415
>gi|392566032|gb|EIW59208.1| DNA polymerase alpha subunit B [Trametes versicolor FP-101664 SS1]
Length = 530
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET-F 66
SMF++ GP+T L+Y+PL++L++ + +P V++L GP +D +HP + G + T
Sbjct: 238 FSMFIACGPFTPEADLAYRPLQNLVSKLKEAKPAVVLLTGPFIDATHPAIKVGDVDATPR 297
Query: 67 EDFYVKLIDSIVQPLE-KPG 85
E F +L++ + + L+ PG
Sbjct: 298 EMFQAELVNRLREFLDASPG 317
>gi|403294139|ref|XP_003938060.1| PREDICTED: DNA polymerase alpha subunit B [Saimiri boliviensis
boliviensis]
Length = 662
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSH 54
+ V+ GPYT SD+++Y PL DLIA+ PDV IL GP LD H
Sbjct: 342 VLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKH 386
>gi|358057840|dbj|GAA96342.1| hypothetical protein E5Q_03008 [Mixia osmundae IAM 14324]
Length = 2172
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
+S+ V+ GPYT L Y PLEDL ++ +P ++IL+GP +D +HPL+ G++ E +
Sbjct: 1865 MSIIVANGPYTLDGDLEYTPLEDLSQSIMKLKPHLVILLGPFIDGNHPLIRQGAMLEPPK 1924
Query: 68 DFYVKLIDSIVQPL 81
+ + + +Q +
Sbjct: 1925 QIFRNKVATRIQAM 1938
>gi|358374849|dbj|GAA91438.1| DNA polymerase alpha/primase associated subunit [Aspergillus
kawachii IFO 4308]
Length = 642
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ V+AGPYT D L Y+PL+++ D L+L+GP LD HPLL +G
Sbjct: 358 LNVLVAAGPYTADDNLDYEPLQEICRKAADSYADGLVLLGPFLDIEHPLLASG 410
>gi|350639647|gb|EHA28001.1| DNA polymerase [Aspergillus niger ATCC 1015]
Length = 650
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ V+AGPYT D L Y+PL+++ D L+L+GP LD HPLL +G
Sbjct: 358 LNILVAAGPYTADDNLDYEPLKEICRKAADSYADGLVLLGPFLDIEHPLLASG 410
>gi|428184561|gb|EKX53416.1| DNA polymerase alpha subunit B, partial [Guillardia theta CCMP2712]
Length = 731
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLL 57
+ LS+ ++GPYT S L+Y PL+DL+ ++ PDVL+L GP +D H LL
Sbjct: 372 QPLSIVAASGPYTTSADLNYSPLDDLLEYVRKESPDVLVLCGPFVDYQHRLL 423
>gi|255954187|ref|XP_002567846.1| Pc21g08060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589557|emb|CAP95703.1| Pc21g08060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 657
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ ++AGPYT D L ++PL++L + D L+L+GP LD HPLL +G
Sbjct: 363 LNIMIAAGPYTADDNLDFEPLQELCQKAAESYADGLVLMGPFLDIEHPLLASG 415
>gi|317035177|ref|XP_001401243.2| DNA polymerase alpha/primase associated subunit [Aspergillus niger
CBS 513.88]
Length = 660
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ V+AGPYT D L Y+PL+++ D L+L+GP LD HPLL +G
Sbjct: 368 LNILVAAGPYTADDNLDYEPLKEICRKAADSYADGLVLLGPFLDIEHPLLASG 420
>gi|212529860|ref|XP_002145087.1| DNA polymerase alpha/primase associated subunit [Talaromyces
marneffei ATCC 18224]
gi|210074485|gb|EEA28572.1| DNA polymerase alpha/primase associated subunit [Talaromyces
marneffei ATCC 18224]
Length = 654
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++F +AGPYT D L ++PL++L ++ D L+L+GP +D HPL+ G
Sbjct: 359 LNIFYAAGPYTADDNLDFEPLQELCKKAAEEYADALLLLGPFIDLEHPLIATGDF 413
>gi|134081927|emb|CAK97193.1| unnamed protein product [Aspergillus niger]
Length = 609
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ V+AGPYT D L Y+PL+++ D L+L+GP LD HPLL +G
Sbjct: 307 LNILVAAGPYTADDNLDYEPLKEICRKAADSYADGLVLLGPFLDIEHPLLASG 359
>gi|242762029|ref|XP_002340296.1| DNA polymerase alpha/primase associated subunit [Talaromyces
stipitatus ATCC 10500]
gi|218723492|gb|EED22909.1| DNA polymerase alpha/primase associated subunit [Talaromyces
stipitatus ATCC 10500]
Length = 650
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++F +AGPYT D L ++PL++L ++ D L+L+GP +D HPL+ G
Sbjct: 355 LNIFYAAGPYTADDNLDFEPLQELCKKAAEEYADALLLLGPFIDLEHPLIATGDF 409
>gi|325091120|gb|EGC44430.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
capsulatus H88]
Length = 667
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
R+L++ +++GP+T D L ++PL L A + D LIL GP LD HPL+ +G
Sbjct: 369 RALNILIASGPFTADDNLDFEPLRTLCAKAADEYADALILTGPFLDLEHPLVASG 423
>gi|154283103|ref|XP_001542347.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410527|gb|EDN05915.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 626
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
R+L++ +++GP+T D L ++PL L A + D LIL GP LD HPL+ +G
Sbjct: 328 RALNILIASGPFTADDNLDFEPLRTLCAKAADEYADALILTGPFLDLEHPLVASG 382
>gi|225561681|gb|EEH09961.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
capsulatus G186AR]
Length = 667
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
R+L++ +++GP+T D L ++PL L A + D LIL GP LD HPL+ +G
Sbjct: 369 RALNILIASGPFTADDNLDFEPLRTLCAKAADEYADALILTGPFLDLEHPLVASG 423
>gi|255547882|ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
gi|223546049|gb|EEF47552.1| alpha DNA polymerase, putative [Ricinus communis]
Length = 621
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 47/69 (68%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
+ +S+ +++GP+T D L ++PL +L+A ++ P +LIL+GP +D+ HP + G++ +
Sbjct: 354 QEISVLIASGPFTTLDNLMFEPLTELLAYASRKLPQLLILLGPFVDSEHPEIKKGTVDGS 413
Query: 66 FEDFYVKLI 74
F++ + + I
Sbjct: 414 FDEIFRQEI 422
>gi|453087977|gb|EMF16018.1| DNA polymerase alpha, subunit B [Mycosphaerella populorum SO2202]
Length = 665
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAE- 64
R L M ++AGPYT LS+ PL L+ + DVL+L+GP LD HP++ +G +
Sbjct: 352 RPLHMLLAAGPYTTESDLSFAPLYTLLERATTERADVLVLMGPFLDLEHPVVASGDFEQH 411
Query: 65 ------------TFEDFYVKLIDSIVQPLEK 83
T D + LI S +Q L +
Sbjct: 412 LPADAKIEPDQATLTDVFRVLISSAIQRLAQ 442
>gi|395330969|gb|EJF63351.1| DNA polymerase alpha, subunit B [Dichomitus squalens LYAD-421 SS1]
Length = 605
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET-F 66
+M V+ GP+T L Y+PL+ LIA +P V +L+GP +D SHP + G + T
Sbjct: 313 FTMHVACGPFTSDGDLQYRPLQTLIAKLKAAKPAVTLLVGPFIDASHPSIKIGDVDSTPT 372
Query: 67 EDFYVKLIDSIVQPLE-KPG 85
E F +++D + LE PG
Sbjct: 373 ETFRTEIVDRLRDFLESSPG 392
>gi|240275285|gb|EER38799.1| DNA polymerase alpha [Ajellomyces capsulatus H143]
Length = 633
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
R+L++ +++GP+T D L ++PL L A + D LIL GP LD HPL+ +G
Sbjct: 369 RALNILIASGPFTADDNLDFEPLRTLCAKAADEYADALILTGPFLDLEHPLVASG 423
>gi|336382478|gb|EGO23628.1| hypothetical protein SERLADRAFT_356508 [Serpula lacrymans var.
lacrymans S7.9]
Length = 363
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETF 66
SLSM ++ GP+T L Y+P LI +P +++LIGP +D++HP + +G + T
Sbjct: 70 SLSMCIACGPFTPDTDLEYQPFHQLIHTLKSTKPAIVLLIGPFIDSAHPYIRDGEVDRTP 129
Query: 67 EDFYVKLI 74
++ + LI
Sbjct: 130 KEMFQTLI 137
>gi|336369696|gb|EGN98037.1| hypothetical protein SERLA73DRAFT_91246 [Serpula lacrymans var.
lacrymans S7.3]
Length = 591
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETF 66
SLSM ++ GP+T L Y+P LI +P +++LIGP +D++HP + +G + T
Sbjct: 298 SLSMCIACGPFTPDTDLEYQPFHQLIHTLKSTKPAIVLLIGPFIDSAHPYIRDGEVDRTP 357
Query: 67 EDFYVKLI 74
++ + LI
Sbjct: 358 KEMFQTLI 365
>gi|346325339|gb|EGX94936.1| DNA polymerase alpha/primase associated subunit [Cordyceps
militaris CM01]
Length = 667
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++F +AGPYT D L + PL L DVL+L GP LD HPL+ G
Sbjct: 380 LTLFFAAGPYTADDNLDFAPLHALCEQAADTHADVLVLAGPFLDADHPLIAAG 432
>gi|389744686|gb|EIM85868.1| DNA polymerase alpha subunit B [Stereum hirsutum FP-91666 SS1]
Length = 596
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET-F 66
SM ++ GP+T L+Y+P L+ ++PDV++L+GP +D HP + G + ET
Sbjct: 322 FSMSIACGPFTPDANLAYQPWSSLLQKLQSEKPDVVLLVGPFIDAQHPKIKIGDIDETPV 381
Query: 67 EDFYVKLIDSIVQPLE 82
E FY D++ + L+
Sbjct: 382 EMFYRHFTDNLREFLD 397
>gi|345560327|gb|EGX43452.1| hypothetical protein AOL_s00215g188 [Arthrobotrys oligospora ATCC
24927]
Length = 642
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L + ++F++AGPYT D L ++ L +L+ V+ EPD + L GP +DT HP + G
Sbjct: 350 LAAGNFNVFIAAGPYTTDDNLDFEGLTELVDKIVETEPDAVFLSGPFIDTEHPKVKLGDF 409
Query: 63 AETFEDF 69
+F
Sbjct: 410 PVDMNNF 416
>gi|301114883|ref|XP_002999211.1| DNA polymerase subunit alpha B, putative [Phytophthora infestans
T30-4]
gi|262111305|gb|EEY69357.1| DNA polymerase subunit alpha B, putative [Phytophthora infestans
T30-4]
Length = 624
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
+ + + + GP+T + + Y PL DL+ + + Q+PDVLIL+GP +D+ H + +G
Sbjct: 341 KPVRVLTACGPFTTTSNVDYLPLNDLLQIAIDQKPDVLILVGPFIDSMHSMFQDG 395
>gi|225677496|gb|EEH15780.1| DNA polymerase alpha 70 kDa subunit [Paracoccidioides brasiliensis
Pb03]
Length = 665
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 4 TRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
T R L++ +++GP+T D L ++PL L + D LIL GP LD HPLL +G
Sbjct: 367 TERVLNILIASGPFTADDNLDFEPLRTLCIKAANEYADALILTGPFLDLEHPLLASG 423
>gi|226295381|gb|EEH50801.1| DNA polymerase subunit alpha B [Paracoccidioides brasiliensis Pb18]
Length = 655
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 4 TRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
T R L++ +++GP+T D L ++PL L + D LIL GP LD HPLL +G
Sbjct: 357 TERVLNILIASGPFTADDNLDFEPLRTLCIKAANEYADALILTGPFLDLEHPLLASG 413
>gi|343173002|gb|AEL99204.1| DNA polymerase alpha subunit B family protein, partial [Silene
latifolia]
Length = 315
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 37/48 (77%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHP 55
LS+ ++AGP+T +D L ++PL +L+A +++P +LIL+GP +D+ HP
Sbjct: 265 LSVIIAAGPFTTTDNLFFEPLSELLAYASRKQPQLLILLGPFVDSEHP 312
>gi|343173000|gb|AEL99203.1| DNA polymerase alpha subunit B family protein, partial [Silene
latifolia]
Length = 315
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 37/48 (77%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHP 55
LS+ ++AGP+T +D L ++PL +L+A +++P +LIL+GP +D+ HP
Sbjct: 265 LSVIIAAGPFTTTDNLFFEPLSELLAYASRKQPQLLILLGPFVDSEHP 312
>gi|348683854|gb|EGZ23669.1| hypothetical protein PHYSODRAFT_480522 [Phytophthora sojae]
Length = 629
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
+ + + + GP+T + + Y PL DL+ + + Q+PDVLIL+GP +D+ H + +G
Sbjct: 346 KPVRVLTACGPFTTTSNVDYLPLNDLLQIAIDQKPDVLILVGPFIDSMHSMFQDG 400
>gi|255715665|ref|XP_002554114.1| KLTH0E14608p [Lachancea thermotolerans]
gi|238935496|emb|CAR23677.1| KLTH0E14608p [Lachancea thermotolerans CBS 6340]
Length = 653
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLIA-LTVQQEPDVLILIGPLLDTSHPLLLNGS 61
L +S+ + V+ GPYT S+ L + LED + L +P V+I+ GP LD +HPL+ +G
Sbjct: 349 LDGKSMKVVVTNGPYTASNCLDFGNLEDFVERLNDGVKPHVVIMFGPFLDVTHPLVASGR 408
Query: 62 LAE---------TFEDFYVKLIDSIVQPLE 82
+ E T ++ + K+I I++ +
Sbjct: 409 IPEFPGVKVQPKTLDEVFTKIISPILRKIN 438
>gi|258567182|ref|XP_002584335.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905781|gb|EEP80182.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 583
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ +++GPYT D L ++PL L A +Q D+++L GP LD HPLL G
Sbjct: 329 LNVLLASGPYTTDDNLDFEPLNALCAKAAEQSADMVLLTGPFLDIEHPLLATG 381
>gi|296420101|ref|XP_002839619.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635802|emb|CAZ83810.1| unnamed protein product [Tuber melanosporum]
Length = 652
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L+ L++ V++GPYT D L ++ L ++ + PDVLIL GP +D HPL+ G
Sbjct: 365 LSAGGLNIVVASGPYTTDDNLHFEALSEICNKAAESCPDVLILTGPFIDADHPLIRTG 422
>gi|358392300|gb|EHK41704.1| hypothetical protein TRIATDRAFT_134831 [Trichoderma atroviride IMI
206040]
Length = 654
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
LS+ +AGPYT D L Y+PL+ L D LIL GP LD HPL+ G
Sbjct: 362 LSIIYAAGPYTADDNLDYEPLQALCNQAADTYADALILTGPFLDIDHPLIATG 414
>gi|50553420|ref|XP_504121.1| YALI0E18832p [Yarrowia lipolytica]
gi|49649990|emb|CAG79716.1| YALI0E18832p [Yarrowia lipolytica CLIB122]
Length = 608
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 10/70 (14%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGS----- 61
SL+ ++AGPYT + L + PL+DL+A Q D IL+GP +D+ HPL+ GS
Sbjct: 339 SLTQIIAAGPYTTTKDLDFLPLKDLLA----QPADTFILLGPFIDSVHPLVAQGSFSVPG 394
Query: 62 -LAETFEDFY 70
+ T ED +
Sbjct: 395 KMVATVEDLF 404
>gi|70997197|ref|XP_753352.1| DNA polymerase alpha/primase associated subunit [Aspergillus
fumigatus Af293]
gi|66850988|gb|EAL91314.1| DNA polymerase alpha/primase associated subunit [Aspergillus
fumigatus Af293]
Length = 617
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ +++GPYT D L+++PL ++ + D L+L+GP LD HPLL +G
Sbjct: 305 LNVLIASGPYTADDNLAFEPLHEICQKAAETYADSLVLMGPFLDIEHPLLASG 357
>gi|159126923|gb|EDP52039.1| DNA polymerase alpha/primase associated subunit [Aspergillus
fumigatus A1163]
Length = 617
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ +++GPYT D L+++PL ++ + D L+L+GP LD HPLL +G
Sbjct: 305 LNVLIASGPYTADDNLAFEPLHEICQKAAETYADSLVLMGPFLDIEHPLLASG 357
>gi|119478574|ref|XP_001259389.1| DNA polymerase alpha/primase associated subunit [Neosartorya
fischeri NRRL 181]
gi|119407543|gb|EAW17492.1| DNA polymerase alpha/primase associated subunit [Neosartorya
fischeri NRRL 181]
Length = 664
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ +++GPYT D L+++PL ++ + D L+L+GP LD HPLL +G
Sbjct: 370 LNVLIASGPYTADDNLAFEPLHEICQKAAETYADSLVLMGPFLDIEHPLLASG 422
>gi|378726669|gb|EHY53128.1| DNA polymerase alpha subunit B [Exophiala dermatitidis NIH/UT8656]
Length = 662
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ +++GPYT D L ++P ++L + D LIL GP LD HP+L +G
Sbjct: 373 LNIMIASGPYTAEDNLDFEPFQELCQKAAENMVDALILTGPFLDIEHPMLASG 425
>gi|358388584|gb|EHK26177.1| hypothetical protein TRIVIDRAFT_73573 [Trichoderma virens Gv29-8]
Length = 649
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
LS+ +AGPYT D L Y+PL+ L D L+L GP LD HPL+ G
Sbjct: 357 LSIIYAAGPYTADDNLDYEPLQALCNQAADTYADALVLTGPFLDIDHPLIATG 409
>gi|303284707|ref|XP_003061644.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456974|gb|EEH54274.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 417
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLL--NGSLAE 64
SLS+ +++GPYT + LSY+PL + +A + PD ++L+GP +D H + + L
Sbjct: 122 SLSVAIASGPYTCAGDLSYEPLNEFLAYCAETRPDAVVLMGPFVDAEHKSVRGDDAPLDV 181
Query: 65 TFEDFY 70
+FED +
Sbjct: 182 SFEDVF 187
>gi|398407609|ref|XP_003855270.1| hypothetical protein MYCGRDRAFT_91224 [Zymoseptoria tritici IPO323]
gi|339475154|gb|EGP90246.1| hypothetical protein MYCGRDRAFT_91224 [Zymoseptoria tritici IPO323]
Length = 672
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
L++ V++GPYT LSY PL L+ + Q+PD+L++ GP LD HP + G +A
Sbjct: 355 LNLLVASGPYTTDTDLSYAPLYALLNVASTQKPDLLLISGPFLDLEHPQISAGDVASLIP 414
Query: 68 D 68
D
Sbjct: 415 D 415
>gi|223998634|ref|XP_002288990.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976098|gb|EED94426.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 719
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
LS+ GP+T D L Y PL D++ + +PDV+I+ GP +D PL+ G T E
Sbjct: 410 LSIVSMCGPFTTKDNLEYDPLVDMVMKISEDQPDVVIMCGPFVDGRQPLVQGGEPTITDE 469
Query: 68 DFYVKLI 74
D K +
Sbjct: 470 DGNEKKV 476
>gi|340517616|gb|EGR47860.1| hypothetical protein TRIREDRAFT_79187 [Trichoderma reesei QM6a]
Length = 664
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++ +AGPYT D L Y+PL+ L + D L+L GP LD HPL+ G
Sbjct: 372 LTILYAAGPYTADDNLDYEPLQALCSQAADTYADALVLTGPFLDIDHPLIATGDF 426
>gi|391870358|gb|EIT79543.1| DNA polymerase alpha-primase complex, polymerase-associated subunit
B [Aspergillus oryzae 3.042]
Length = 651
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ +S+GPYT D L ++PL ++ + D L+L+GP LD HPL+ +G
Sbjct: 357 LNIMISSGPYTADDNLDFEPLNEICQKAAESYADGLVLMGPFLDIEHPLVASG 409
>gi|302688247|ref|XP_003033803.1| hypothetical protein SCHCODRAFT_233383 [Schizophyllum commune H4-8]
gi|300107498|gb|EFI98900.1| hypothetical protein SCHCODRAFT_233383 [Schizophyllum commune H4-8]
Length = 877
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
+M V AGPYT L++ P + +A ++ DV++L+GP LD++HPL+ G E
Sbjct: 401 FTMAVFAGPYTSDSDLNFAPWQSALAALREEAVDVVVLLGPFLDSAHPLIKTGDADEPLH 460
Query: 68 DFYVK 72
+++
Sbjct: 461 RMFLR 465
>gi|261189697|ref|XP_002621259.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
dermatitidis SLH14081]
gi|239591495|gb|EEQ74076.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
dermatitidis SLH14081]
Length = 667
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
R+L++ +++GP+T D L ++PL L + D LIL+GP LD HPL+ +G
Sbjct: 369 RALNILIASGPFTADDNLDFEPLRALCLKAGDEYADALILMGPFLDLEHPLIASG 423
>gi|169779341|ref|XP_001824135.1| DNA polymerase alpha/primase associated subunit [Aspergillus oryzae
RIB40]
gi|83772874|dbj|BAE63002.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 651
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ +S+GPYT D L ++PL ++ + D L+L+GP LD HPL+ +G
Sbjct: 357 LNIMISSGPYTADDNLDFEPLNEICQKAAESYADGLVLMGPFLDIEHPLVASG 409
>gi|312374432|gb|EFR21988.1| hypothetical protein AND_15916 [Anopheles darlingi]
Length = 575
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R L+M +++ P+T D L Y+ L L+ PDVL+L GP D S L +AET
Sbjct: 292 RPLTMVIASAPFTGRDDLLYERLTGLLQYCATDPPDVLLLCGPFADASCSLY--SEVAET 349
Query: 66 FEDFYVKLIDSIV 78
F++++ K++ +I+
Sbjct: 350 FQEYFEKIVGTIM 362
>gi|67541370|ref|XP_664459.1| hypothetical protein AN6855.2 [Aspergillus nidulans FGSC A4]
gi|40739064|gb|EAA58254.1| hypothetical protein AN6855.2 [Aspergillus nidulans FGSC A4]
Length = 905
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ ++ GPYT D L ++PL+++ + D LIL+GP LD HPLL +G
Sbjct: 613 LNVMIACGPYTADDNLDFEPLKEICHKAAEGYADGLILLGPFLDLEHPLLASG 665
>gi|347971810|ref|XP_313675.5| AGAP004392-PA [Anopheles gambiae str. PEST]
gi|333469039|gb|EAA09104.6| AGAP004392-PA [Anopheles gambiae str. PEST]
Length = 729
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
++L+ +++ P+T D L Y+ L L+ PDVLIL GP D + L +AET
Sbjct: 457 KTLTCVIASAPFTDRDDLLYEKLSSLLVYCSNNPPDVLILTGPFADANCKLY--AEVAET 514
Query: 66 FEDFYVKLIDSIVQPL 81
F++++ K+I +I+ +
Sbjct: 515 FDEYFEKIISTIMSSI 530
>gi|347971812|ref|XP_003436801.1| AGAP004392-PB [Anopheles gambiae str. PEST]
gi|333469040|gb|EGK97159.1| AGAP004392-PB [Anopheles gambiae str. PEST]
Length = 616
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
++L+ +++ P+T D L Y+ L L+ PDVLIL GP D + L +AET
Sbjct: 344 KTLTCVIASAPFTDRDDLLYEKLSSLLVYCSNNPPDVLILTGPFADAN--CKLYAEVAET 401
Query: 66 FEDFYVKLIDSIVQPL 81
F++++ K+I +I+ +
Sbjct: 402 FDEYFEKIISTIMSSI 417
>gi|259480453|tpe|CBF71599.1| TPA: DNA polymerase alpha/primase associated subunit
(AFU_orthologue; AFUA_5G13020) [Aspergillus nidulans
FGSC A4]
Length = 682
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ ++ GPYT D L ++PL+++ + D LIL+GP LD HPLL +G
Sbjct: 390 LNVMIACGPYTADDNLDFEPLKEICHKAAEGYADGLILLGPFLDLEHPLLASG 442
>gi|295670609|ref|XP_002795852.1| DNA polymerase subunit alpha B [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284937|gb|EEH40503.1| DNA polymerase subunit alpha B [Paracoccidioides sp. 'lutzii' Pb01]
Length = 634
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 4 TRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
T + L++ +++GP+T D L ++PL L + D LIL GP LD HPLL +G
Sbjct: 336 TEQVLNILIASGPFTADDNLDFEPLRTLCIKAANEYADALILTGPFLDLEHPLLASG 392
>gi|115387293|ref|XP_001211152.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195236|gb|EAU36936.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 660
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++ +++GPYT D+L ++PL ++ D LIL+GP LD HPLL +G
Sbjct: 366 LNVLIASGPYTTDDSLDFEPLNEICQKAADSYADGLILMGPFLDIEHPLLASGDF 420
>gi|407923832|gb|EKG16895.1| DNA polymerase alpha/epsilon subunit B [Macrophomina phaseolina
MS6]
Length = 681
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
R LS V++GPYT L + L L+ ++ PD+L+L GP LD HP ++NG
Sbjct: 368 RPLSFMVASGPYTPGHVLDFAALNALMENALESRPDLLVLSGPFLDIEHPSVING 422
>gi|409040116|gb|EKM49604.1| hypothetical protein PHACADRAFT_166969 [Phanerochaete carnosa
HHB-10118-sp]
Length = 567
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAE 64
S S+ V+ GP+T LSY+P + L+A ++P+++I++GP +D H L NG + E
Sbjct: 301 SFSVSVACGPFTADADLSYEPWKLLLAKWKTEKPEIIIIVGPFIDCMHALWKNGEVDE 358
>gi|239612976|gb|EEQ89963.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
dermatitidis ER-3]
Length = 667
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
R+L++ +++GP+T D L ++PL L + D LIL GP LD HPL+ +G
Sbjct: 369 RALNILIASGPFTADDNLDFEPLRALCLKAGDEYADALILTGPFLDLEHPLIASG 423
>gi|406866827|gb|EKD19866.1| DNA polymerase alpha/epsilon subunit B [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 668
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
LS+ + +GPYT D L ++PL L + D LIL GP LD HPL+ G
Sbjct: 372 LSIMIGSGPYTADDNLDFEPLHALCSQAADTYADALILTGPFLDIDHPLIATG 424
>gi|238499981|ref|XP_002381225.1| DNA polymerase alpha/primase associated subunit [Aspergillus flavus
NRRL3357]
gi|220692978|gb|EED49324.1| DNA polymerase alpha/primase associated subunit [Aspergillus flavus
NRRL3357]
Length = 651
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ +S+GPYT D L ++PL + + D L+L+GP LD HPL+ +G
Sbjct: 357 LNIMISSGPYTADDNLDFEPLNKICQKAAESYADGLVLMGPFLDIEHPLVASG 409
>gi|213405225|ref|XP_002173384.1| DNA polymerase alpha B-subunit [Schizosaccharomyces japonicus
yFS275]
gi|212001431|gb|EEB07091.1| DNA polymerase alpha B-subunit [Schizosaccharomyces japonicus
yFS275]
Length = 570
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
++ + +++GP+ D Y PL + VQ++PD +IL+GP +D HP + G +
Sbjct: 304 QNTRVLLASGPWCVRDNFEYTPLRAFVEHVVQEQPDAVILMGPFIDVHHPFIEIGVIPNA 363
Query: 66 FEDFYVKLIDSIVQPL 81
D + V P+
Sbjct: 364 KADSVEGIFQQFVTPI 379
>gi|322696184|gb|EFY87980.1| putative POL12 (DNA-directed DNA polymerase alpha) [Metarhizium
acridum CQMa 102]
Length = 616
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++ ++GPYT D L Y+PL L + D L+L GP LD HPL+ G +
Sbjct: 377 LTIMYASGPYTADDNLDYEPLHALCSQAADSYADALVLAGPFLDIDHPLIATGDI 431
>gi|327352151|gb|EGE81008.1| hypothetical protein BDDG_03949 [Ajellomyces dermatitidis ATCC
18188]
Length = 496
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
R+L++ +++GP+T D L ++PL L + D LIL GP LD HPL+ +G
Sbjct: 198 RALNILIASGPFTADDNLDFEPLRALCLKAGDEYADALILTGPFLDLEHPLIASGDF 254
>gi|296809716|ref|XP_002845196.1| DNA polymerase subunit alpha B [Arthroderma otae CBS 113480]
gi|238842584|gb|EEQ32246.1| DNA polymerase subunit alpha B [Arthroderma otae CBS 113480]
Length = 664
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L+ +AGPYT D L+++PL L ++ D LIL GP +D HPL+ +G
Sbjct: 369 LNYMFAAGPYTTDDNLAFEPLNALCEKAAEECADALILTGPFIDLEHPLIASG 421
>gi|19075265|ref|NP_587765.1| DNA polymerase alpha B-subunit [Schizosaccharomyces pombe 972h-]
gi|6015008|sp|O74946.1|DPOA2_SCHPO RecName: Full=DNA polymerase alpha subunit B
gi|3169066|emb|CAA19261.1| DNA polymerase alpha B-subunit [Schizosaccharomyces pombe]
Length = 574
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL----A 63
+S+++++GP++ D LS+ PL+ +I+ + D++IL GP LD +H L+ G++ A
Sbjct: 304 ISIYIASGPWSLRDDLSFSPLKSMISYVNKNPVDLVILCGPFLDINHILIRTGNITGTSA 363
Query: 64 ETFEDFYVKLIDSIVQPLEKP 84
+ E+ + + + I+ L P
Sbjct: 364 TSLEELFKERVTPILSQLTCP 384
>gi|322703760|gb|EFY95364.1| putative POL12 (DNA-directed DNA polymerase alpha) [Metarhizium
anisopliae ARSEF 23]
Length = 595
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ ++GPYT D L Y+PL L + D L+L GP LD HPL+ G
Sbjct: 360 LTIMYASGPYTADDNLDYEPLHALCSRAADSYADALVLAGPFLDIDHPLIATG 412
>gi|393218941|gb|EJD04429.1| DNA polymerase alpha, subunit B [Fomitiporia mediterranea MF3/22]
Length = 548
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
++ ++ ++ GPYT L +K L L+ + +P VL+L+GP LD +HP++ +G + E
Sbjct: 274 KAFTLVMACGPYTSDSDLGFKQLGSLMEKLLSSKPSVLVLLGPFLDIAHPIIKSGDIDEM 333
Query: 66 FEDFYVKLIDSIVQPLE 82
D + + V+PL
Sbjct: 334 PLDIFHRC---FVEPLR 347
>gi|403172302|ref|XP_003331441.2| hypothetical protein PGTG_12763 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169793|gb|EFP87022.2| hypothetical protein PGTG_12763 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 322
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
+S+ V+ GP+T + L + P E I + +PD +IL+GP +DT+H L+ G++ +
Sbjct: 25 ISLVVACGPFTWDNDLDFVPFEAFIDQLILDQPDCVILLGPFIDTNHTLIKTGNITQMPS 84
Query: 68 DFYVKLIDSIVQPL 81
+ + I S + L
Sbjct: 85 TIFREKISSRLHKL 98
>gi|169858232|ref|XP_001835762.1| alpha DNA polymerase [Coprinopsis cinerea okayama7#130]
gi|116503212|gb|EAU86107.1| alpha DNA polymerase [Coprinopsis cinerea okayama7#130]
Length = 612
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L ++ ++ ++ GPYT L YKP + ++P+VLIL+GP +D +HP + NG
Sbjct: 317 LGTKTSTVCIACGPYTSDTDLLYKPWRVFLDDITPKKPNVLILLGPFIDAAHPRIKNGES 376
Query: 63 AETFED-FYVKLIDSI 77
+ + F + I+SI
Sbjct: 377 ETSPQSIFQARFINSI 392
>gi|432091137|gb|ELK24349.1| DNA polymerase alpha subunit B [Myotis davidii]
Length = 622
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 26/102 (25%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLIL------------------------ 45
+ V+ GPYT SD+++Y PL DLI + PDV IL
Sbjct: 341 VLVACGPYTTSDSITYDPLLDLITIINHDRPDVCILDPGRCVITPSSELSSFSVRSTAVS 400
Query: 46 --IGPLLDTSHPLLLNGSLAETFEDFYVKLIDSIVQPLEKPG 85
GP LD H + N L FED + + + +I++ G
Sbjct: 401 SVFGPFLDAKHEQVENCLLTSPFEDVFKQCLRTIIEGTRSSG 442
>gi|452845614|gb|EME47547.1| hypothetical protein DOTSEDRAFT_59988 [Dothistroma septosporum
NZE10]
Length = 667
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
R LSM + +GPYT LS+ PL L+ DVL+L GP LD HP++ +G
Sbjct: 355 RPLSMLIGSGPYTTDLDLSFAPLYALLEKAESDRADVLVLTGPFLDIEHPVVASGD---- 410
Query: 66 FEDFYVKLIDSIVQP 80
FE + D+ +QP
Sbjct: 411 FEPYVPS--DAKIQP 423
>gi|402225765|gb|EJU05826.1| DNA polymerase alpha subunit B [Dacryopinax sp. DJM-731 SS1]
Length = 570
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
+M ++ GP+T L Y+P E L++ + +P VL+L+GP +D++H L+ G + T
Sbjct: 296 FNMVIACGPFTPDGDLLYRPFEQLLSEVSRSKPGVLLLLGPFIDSNHSLIRKGDVDHT 353
>gi|451851852|gb|EMD65150.1| hypothetical protein COCSADRAFT_141761 [Cochliobolus sativus
ND90Pr]
Length = 695
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL--- 62
R L++ +++GPYT L + PL + + D +ILIGP LD HP + +G
Sbjct: 369 RPLTLMIASGPYTTEQNLDFAPLHAFLDKAAEAYADSIILIGPFLDAEHPQIRSGDFDAP 428
Query: 63 ------AETFEDFYVKLIDSIVQPLEK 83
T D + I S +Q K
Sbjct: 429 PGVSPDQATMTDLFRHHISSAIQSFNK 455
>gi|340905257|gb|EGS17625.1| DNA polymerase alpha-primase complex-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 718
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ +++GPYT D L ++PL L A D+L+L GP LD HPLL G
Sbjct: 419 LNIMIASGPYTADDNLLFEPLATLCAEAADSYTDLLLLTGPFLDAEHPLLSTG 471
>gi|401626719|gb|EJS44644.1| pol12p [Saccharomyces arboricola H-6]
Length = 706
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 10/83 (12%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIA-LTVQQEPDVLILIGPLLDTSHPLLLNGSL--- 62
SL + V+ GPY D S + L+D I+ + + +P VLI+ GP +D +HPL+ +G L
Sbjct: 393 SLKVIVTCGPYFADDNFSLELLQDFISRINSEAKPHVLIMFGPFIDITHPLIASGKLPNF 452
Query: 63 ------AETFEDFYVKLIDSIVQ 79
+T ++ ++KL I++
Sbjct: 453 PQFKSQPKTLDELFLKLFTPILK 475
>gi|156059150|ref|XP_001595498.1| hypothetical protein SS1G_03587 [Sclerotinia sclerotiorum 1980]
gi|154701374|gb|EDO01113.1| hypothetical protein SS1G_03587 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 664
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++ + +GP+T D L ++PL + + DVL+L GP LD HPL+ +G
Sbjct: 369 LNIIIGSGPFTADDNLDFEPLHAICSQAADNYADVLVLTGPFLDIDHPLIASGDF 423
>gi|154304222|ref|XP_001552516.1| hypothetical protein BC1G_08381 [Botryotinia fuckeliana B05.10]
Length = 726
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++ + +GP+T D L ++PL + + DVLIL GP LD HPL+ +G
Sbjct: 375 LNIIIGSGPFTADDNLDFEPLHAICSQAADTYADVLILTGPFLDIDHPLIASGDF 429
>gi|347828114|emb|CCD43811.1| similar to DNA polymerase alpha/primase associated subunit
[Botryotinia fuckeliana]
Length = 670
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++ + +GP+T D L ++PL + + DVLIL GP LD HPL+ +G
Sbjct: 375 LNIIIGSGPFTADDNLDFEPLHAICSQAADTYADVLILTGPFLDIDHPLIASGDF 429
>gi|390603438|gb|EIN12830.1| DNA polymerase alpha subunit B [Punctularia strigosozonata
HHB-11173 SS5]
Length = 580
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
SM V++GP+T L YKP L+ +P V++L GP +D SHP + +G + E+
Sbjct: 304 FSMAVASGPFTSDADLKYKPWRTLLDALKLSKPAVVLLNGPFVDLSHPRIQDGDIDESPA 363
Query: 68 DFYVKLIDSIVQPLEK 83
+ ++ V+PL +
Sbjct: 364 QLFARV---FVEPLRE 376
>gi|189200140|ref|XP_001936407.1| DNA polymerase alpha 70 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983506|gb|EDU48994.1| DNA polymerase alpha 70 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 694
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL--- 62
R L+M +++GPYT L + PL + + D +IL+GP LD HP + +G
Sbjct: 369 RPLTMMIASGPYTTDQNLDFAPLHAFLDNAAEAYADSIILVGPFLDAEHPQIRSGDFDVP 428
Query: 63 ------AETFEDFYVKLIDSIVQPLEK 83
T D + I S +Q K
Sbjct: 429 PNASPDQATMTDLFRYHISSAIQGFNK 455
>gi|302824723|ref|XP_002994002.1| hypothetical protein SELMODRAFT_23326 [Selaginella
moellendorffii]
gi|300138164|gb|EFJ04942.1| hypothetical protein SELMODRAFT_23326 [Selaginella
moellendorffii]
Length = 241
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 12 VSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
V++GP+T SD LS++PL +L+A + P+VL+L+G D HP + G
Sbjct: 2 VASGPFTTSDNLSFEPLMELLAYARNKRPNVLLLMGLFFDAEHPHVKQG 50
>gi|403415195|emb|CCM01895.1| predicted protein [Fibroporia radiculosa]
Length = 1294
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG----SL 62
S S+ V+ GP+T L++ + L+ ++P VL+L+GP +D +HP++ NG S
Sbjct: 303 SFSICVACGPFTPDSDLNFNSWKKLLDKVKVEKPTVLLLVGPFIDVNHPVVKNGEMDISA 362
Query: 63 AETFEDFY 70
A+ F D +
Sbjct: 363 ADMFHDKF 370
>gi|451995337|gb|EMD87805.1| hypothetical protein COCHEDRAFT_1227110 [Cochliobolus
heterostrophus C5]
Length = 695
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL--- 62
R L++ +++GPYT L + PL + + D +IL+GP LD HP + +G
Sbjct: 369 RPLTLMIASGPYTTEQNLDFAPLHAFLDKAAEAYADSIILVGPFLDAEHPQIRSGDFDAP 428
Query: 63 ------AETFEDFYVKLIDSIVQPLEK 83
T D + I S +Q K
Sbjct: 429 PGVNPDQATMTDLFRHHISSAIQSFHK 455
>gi|336473167|gb|EGO61327.1| hypothetical protein NEUTE1DRAFT_77266 [Neurospora tetrasperma FGSC
2508]
gi|350293573|gb|EGZ74658.1| DNA polymerase alpha, subunit B [Neurospora tetrasperma FGSC 2509]
Length = 667
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++ ++GPYT D L ++PL LI D +IL GP +D HPL+ +G
Sbjct: 369 LNVIFASGPYTADDNLDFEPLHTLINEAADTYADAVILTGPFIDAEHPLIASGDF 423
>gi|328871924|gb|EGG20294.1| hypothetical protein DFA_07417 [Dictyostelium fasciculatum]
Length = 645
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETF 66
S + V++GP+++ + Y P ++L + + P+++IL GP +D S+ N L ++F
Sbjct: 395 SCYIIVASGPFSEYENTLYHPFKELCKVIENKRPNIVILNGPFIDESNQ--NNQFLDKSF 452
Query: 67 EDFYVKLIDSIVQPLE 82
E+F+ + I+QPLE
Sbjct: 453 EEFFY---EDIIQPLE 465
>gi|336269555|ref|XP_003349538.1| hypothetical protein SMAC_03126 [Sordaria macrospora k-hell]
gi|380093387|emb|CCC09045.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 666
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++ ++GPYT D L ++PL LI D +IL GP +D HPL+ +G
Sbjct: 368 LNVIFASGPYTADDNLDFEPLHTLINEAADTYADAVILAGPFIDAEHPLIASGDF 422
>gi|46125287|ref|XP_387197.1| hypothetical protein FG07021.1 [Gibberella zeae PH-1]
Length = 655
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ ++GPYT D L ++PL L + D L+L GP LD HPL+ G
Sbjct: 360 LNILYASGPYTADDNLDFEPLHALCSQAADTYADALVLTGPFLDIDHPLIATG 412
>gi|449549021|gb|EMD39987.1| hypothetical protein CERSUDRAFT_103890 [Ceriporiopsis subvermispora
B]
Length = 589
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL---- 62
S ++ GP+T L Y P ++++ +P V++L+GP +D++HPL+ G +
Sbjct: 311 SFVAHIACGPFTPDSDLQYAPWHNMLSRIKSDKPAVILLVGPFVDSAHPLIKIGDVDATP 370
Query: 63 AETFEDFYVK 72
AE F+ +V+
Sbjct: 371 AEMFQQHFVE 380
>gi|408397989|gb|EKJ77126.1| hypothetical protein FPSE_02770 [Fusarium pseudograminearum CS3096]
Length = 655
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ ++GPYT D L ++PL L + D L+L GP LD HPL+ G
Sbjct: 360 LNILYASGPYTADDNLDFEPLHALCSQAADTYADALVLTGPFLDIDHPLIATG 412
>gi|315042075|ref|XP_003170414.1| DNA polymerase subunit alpha B [Arthroderma gypseum CBS 118893]
gi|311345448|gb|EFR04651.1| DNA polymerase subunit alpha B [Arthroderma gypseum CBS 118893]
Length = 664
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L+ +AGPYT D L+++ L L ++ D LIL GP +D HPL+ +G
Sbjct: 369 LNYIFAAGPYTTDDNLAFEALNTLCEKAAEECADALILTGPFIDLEHPLIASGDF 423
>gi|308497134|ref|XP_003110754.1| CRE-DIV-1 protein [Caenorhabditis remanei]
gi|308242634|gb|EFO86586.1| CRE-DIV-1 protein [Caenorhabditis remanei]
Length = 581
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
++ + GPYT D Y+ L +L+ V ++PD+L+L GP +D + L + T++D
Sbjct: 320 IWFACGPYTAMDNCGYEQLCELLDKVVAEKPDILVLAGPFVDQKNAFLNKSTFNITYDDL 379
Query: 70 YVKLIDSIVQPL 81
L+ I + L
Sbjct: 380 MEDLLCKIKEKL 391
>gi|169614421|ref|XP_001800627.1| hypothetical protein SNOG_10351 [Phaeosphaeria nodorum SN15]
gi|160707341|gb|EAT82686.2| hypothetical protein SNOG_10351 [Phaeosphaeria nodorum SN15]
Length = 671
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
R L+M +++GPYT L + PL + + D +IL+GP LD HP + G
Sbjct: 369 RPLTMMIASGPYTTDQNLDFAPLHTFLDNAAEAYADSIILVGPFLDAEHPQIRTGDF 425
>gi|409078958|gb|EKM79320.1| hypothetical protein AGABI1DRAFT_91899 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1199
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET- 65
+ S+ + GP+T LSY L L+ + +P L+L+GP +D +HP + G L T
Sbjct: 1012 AFSLIAACGPFTADSDLSYTFLASLVEAAKKDKPSALLLVGPFVDANHPSIRVGDLDSTP 1071
Query: 66 FEDFYVKLIDSI 77
E F+ K+ SI
Sbjct: 1072 VELFHEKIYSSI 1083
>gi|323338794|gb|EGA80009.1| Pol12p [Saccharomyces cerevisiae Vin13]
Length = 565
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNG 60
+L SL + V+ GPY +D S + L++ I ++ + +P VLI+ GP +D +HPL+ +G
Sbjct: 247 SLEGSSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASG 306
Query: 61 SL---------AETFEDFYVKLIDSIVQ 79
L +T ++ ++KL I++
Sbjct: 307 KLPNFPQFKTQPKTLDELFLKLFTPILK 334
>gi|323356256|gb|EGA88060.1| Pol12p [Saccharomyces cerevisiae VL3]
Length = 550
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNG 60
+L SL + V+ GPY +D S + L++ I ++ + +P VLI+ GP +D +HPL+ +G
Sbjct: 232 SLEGSSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASG 291
Query: 61 SL---------AETFEDFYVKLIDSIVQ 79
L +T ++ ++KL I++
Sbjct: 292 KLPNFPQFKTQPKTLDELFLKLFTPILK 319
>gi|346975446|gb|EGY18898.1| DNA polymerase subunit alpha B [Verticillium dahliae VdLs.17]
Length = 658
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++ ++GPYT D L ++PL+ L + D +IL GP +D HPL+ G
Sbjct: 366 LNILFASGPYTADDNLDFEPLQALCSRAADTYADAVILAGPFIDAEHPLIAMGDF 420
>gi|323334744|gb|EGA76117.1| Pol12p [Saccharomyces cerevisiae AWRI796]
Length = 550
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNG 60
+L SL + V+ GPY +D S + L++ I ++ + +P VLI+ GP +D +HPL+ +G
Sbjct: 232 SLEGSSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASG 291
Query: 61 SL---------AETFEDFYVKLIDSIVQ 79
L +T ++ ++KL I++
Sbjct: 292 KLPNFPQFKTQPKTLDELFLKLFTPILK 319
>gi|239781862|pdb|3FLO|A Chain A, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
gi|239781865|pdb|3FLO|C Chain C, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
gi|239781868|pdb|3FLO|E Chain E, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
gi|239781871|pdb|3FLO|G Chain G, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
Length = 460
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 10/83 (12%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNGSL--- 62
SL + V+ GPY +D S + L++ I ++ + +P VLI+ GP +D +HPL+ +G L
Sbjct: 147 SLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNF 206
Query: 63 ------AETFEDFYVKLIDSIVQ 79
+T ++ ++KL I++
Sbjct: 207 PQFKTQPKTLDELFLKLFTPILK 229
>gi|207347854|gb|EDZ73899.1| YBL035Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 634
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNG 60
+L SL + V+ GPY +D S + L++ I ++ + +P VLI+ GP +D +HPL+ +G
Sbjct: 316 SLEGSSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASG 375
Query: 61 SL---------AETFEDFYVKLIDSIVQ 79
L +T ++ ++KL I++
Sbjct: 376 KLPNFPQFKTQPKTLDELFLKLFTPILK 403
>gi|302408437|ref|XP_003002053.1| DNA polymerase subunit alpha B [Verticillium albo-atrum VaMs.102]
gi|261358974|gb|EEY21402.1| DNA polymerase subunit alpha B [Verticillium albo-atrum VaMs.102]
Length = 593
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++ ++GPYT D L ++PL+ L + D +IL GP +D HPL+ G
Sbjct: 301 LNVLFASGPYTADDNLDFEPLQALCSRAADTYADAVILTGPFIDAEHPLIAMGDF 355
>gi|190408861|gb|EDV12126.1| DNA polymerase alpha-primase complex B subunit [Saccharomyces
cerevisiae RM11-1a]
Length = 705
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNG 60
+L SL + V+ GPY +D S + L++ I ++ + +P VLI+ GP +D +HPL+ +G
Sbjct: 387 SLEGSSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASG 446
Query: 61 SL---------AETFEDFYVKLIDSIVQ 79
L +T ++ ++KL I++
Sbjct: 447 KLPNFPQFKTQPKTLDELFLKLFTPILK 474
>gi|327292604|ref|XP_003231000.1| DNA polymerase alpha/primase associated subunit [Trichophyton
rubrum CBS 118892]
gi|326466806|gb|EGD92259.1| DNA polymerase alpha/primase associated subunit [Trichophyton
rubrum CBS 118892]
Length = 664
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L+ +AGPYT D L+++ L L ++ D LIL+GP +D HPL+ +G
Sbjct: 369 LNYMFAAGPYTTDDNLAFEALNTLCEKAAEECVDTLILLGPFIDLEHPLIASGDF 423
>gi|256272739|gb|EEU07712.1| Pol12p [Saccharomyces cerevisiae JAY291]
gi|259144812|emb|CAY77751.1| Pol12p [Saccharomyces cerevisiae EC1118]
Length = 705
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNG 60
+L SL + V+ GPY +D S + L++ I ++ + +P VLI+ GP +D +HPL+ +G
Sbjct: 387 SLEGSSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASG 446
Query: 61 SL---------AETFEDFYVKLIDSIVQ 79
L +T ++ ++KL I++
Sbjct: 447 KLPNFPQFKTQPKTLDELFLKLFTPILK 474
>gi|426195866|gb|EKV45795.1| hypothetical protein AGABI2DRAFT_179299 [Agaricus bisporus var.
bisporus H97]
Length = 588
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET- 65
+ S+ + GP+T LSY L L+ + +P L+L+GP +D +HP + G L T
Sbjct: 310 AFSLIAACGPFTAYSDLSYTFLASLVEAAKKDKPSALLLVGPFVDANHPSIRVGDLDSTP 369
Query: 66 FEDFYVKLIDSI 77
E F+ K+ SI
Sbjct: 370 VELFHEKIYSSI 381
>gi|320591675|gb|EFX04114.1| DNA polymerase alpha primase associated subunit [Grosmannia
clavigera kw1407]
Length = 690
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ ++GPYT D L ++PL L + D ++L GP LD HPL+ G
Sbjct: 391 LNIIYASGPYTADDNLDFEPLHALCSKAADTGVDAVVLAGPFLDADHPLIATG 443
>gi|330931777|ref|XP_003303534.1| hypothetical protein PTT_15776 [Pyrenophora teres f. teres 0-1]
gi|311320427|gb|EFQ88380.1| hypothetical protein PTT_15776 [Pyrenophora teres f. teres 0-1]
Length = 694
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL--- 62
R L++ +++GPYT L + PL + + D +IL+GP LD HP + +G
Sbjct: 369 RPLTIMIASGPYTTDQNLDFAPLHTFLDNAAEAYADSIILVGPFLDAEHPQVRSGDFDVP 428
Query: 63 ------AETFEDFYVKLIDSIVQPLEK 83
T D + I S +Q K
Sbjct: 429 PNASPDQATMTDLFRYHISSAIQSFNK 455
>gi|6319436|ref|NP_009518.1| Pol12p [Saccharomyces cerevisiae S288c]
gi|585063|sp|P38121.1|DPOA2_YEAST RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase I subunit B; AltName: Full=DNA polymerase
alpha:primase complex p86 subunit; Short=Pol
alpha-primase complex p86 subunit; AltName: Full=DNA
polymerase-primase complex p74 subunit
gi|511143|emb|CAA52761.1| unnamed protein product [Saccharomyces cerevisiae]
gi|536045|emb|CAA84855.1| POL12 [Saccharomyces cerevisiae]
gi|285810299|tpg|DAA07084.1| TPA: Pol12p [Saccharomyces cerevisiae S288c]
gi|392301181|gb|EIW12270.1| Pol12p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|1583516|prf||2120451C ORF YBL0415
Length = 705
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L SL + V+ GPY +D S + L++ I ++ + +P VLI+ GP +D +HPL+ +G
Sbjct: 387 NLEGSSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASG 446
Query: 61 SL---------AETFEDFYVKLIDSIVQ 79
L +T ++ ++KL I++
Sbjct: 447 KLPNFPQFKTQPKTLDELFLKLFTPILK 474
>gi|151946359|gb|EDN64581.1| DNA polymerase alpha-primase complex B subunit [Saccharomyces
cerevisiae YJM789]
Length = 705
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L SL + V+ GPY +D S + L++ I ++ + +P VLI+ GP +D +HPL+ +G
Sbjct: 387 NLEGSSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASG 446
Query: 61 SL---------AETFEDFYVKLIDSIVQ 79
L +T ++ ++KL I++
Sbjct: 447 KLPNFPQFKTQPKTLDELFLKLFTPILK 474
>gi|18376383|emb|CAD21272.1| related to POL12 (DNA-directed DNA polymerase alpha) [Neurospora
crassa]
Length = 667
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++ ++GPYT D L ++PL I D +IL GP +D HPL+ +G
Sbjct: 369 LNVIFASGPYTADDNLDFEPLHTFINEAADTYADAVILTGPFIDAEHPLIASGDF 423
>gi|365767038|gb|EHN08526.1| Pol12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 705
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 10/88 (11%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNG 60
+L SL + V+ GPY +D +S + L++ I ++ + +P VLI+ GP +D +HPL+ +G
Sbjct: 387 SLEGSSLKVIVTCGPYFANDKVSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASG 446
Query: 61 SL---------AETFEDFYVKLIDSIVQ 79
L +T ++ ++KL I++
Sbjct: 447 KLPNFPQFKTQPKTLDELFLKLFTPILK 474
>gi|349576345|dbj|GAA21516.1| K7_Pol12p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 705
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L SL + V+ GPY +D S + L++ I ++ + +P VLI+ GP +D +HPL+ +G
Sbjct: 387 NLEGSSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASG 446
Query: 61 SL---------AETFEDFYVKLIDSIVQ 79
L +T ++ ++KL I++
Sbjct: 447 KLPNFPQFKTQPKTLDELFLKLFTPILK 474
>gi|380482927|emb|CCF40930.1| DNA polymerase alpha/epsilon subunit B [Colletotrichum
higginsianum]
Length = 659
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++ +GPYT D L ++PL+ L + D L++ GP +D+ HPL+ G
Sbjct: 366 LNIIYVSGPYTADDNLDFEPLQALCDQAADKYADALVMTGPFIDSEHPLIATGDF 420
>gi|313224814|emb|CBY20606.1| unnamed protein product [Oikopleura dioica]
Length = 527
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 5 RRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAE 64
+ ++ + +GPY SD S +PLE+LI P + I +GP LD SH + + E
Sbjct: 284 KEDTTVVICSGPYFTSDNTSNEPLEELITQVASLAPHLAIFMGPFLDQSH-MGADCISVE 342
Query: 65 TFEDFYVKLIDSIVQ 79
+ + K IDS+ Q
Sbjct: 343 NLNELWKKQIDSLAQ 357
>gi|164426754|ref|XP_961324.2| hypothetical protein NCU03597 [Neurospora crassa OR74A]
gi|157071464|gb|EAA32088.2| hypothetical protein NCU03597 [Neurospora crassa OR74A]
Length = 645
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++ ++GPYT D L ++PL I D +IL GP +D HPL+ +G
Sbjct: 374 LNVIFASGPYTADDNLDFEPLHTFINEAADTYADAVILTGPFIDAEHPLIASGDF 428
>gi|116198853|ref|XP_001225238.1| hypothetical protein CHGG_07582 [Chaetomium globosum CBS 148.51]
gi|88178861|gb|EAQ86329.1| hypothetical protein CHGG_07582 [Chaetomium globosum CBS 148.51]
Length = 657
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ ++GPYT D L ++PL L + D ++L GP LD HPLL G
Sbjct: 360 LTILFASGPYTADDNLDFEPLHTLCSEAADIYADAVVLTGPFLDAEHPLLAAG 412
>gi|342880849|gb|EGU81867.1| hypothetical protein FOXB_07662 [Fusarium oxysporum Fo5176]
Length = 655
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ ++GPYT D L ++PL L + D L+L GP LD HPL+ G
Sbjct: 360 LNILYASGPYTADDNLDFEPLHALCSQAGDTYADALVLTGPFLDIDHPLIATG 412
>gi|302911324|ref|XP_003050467.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731404|gb|EEU44754.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 656
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L+ ++GPYT D L ++PL L D L+L GP LD HPL+ G
Sbjct: 361 LNALFASGPYTADDNLDFEPLHALCTQAADTYADALVLTGPFLDIDHPLIATG 413
>gi|145352257|ref|XP_001420468.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580702|gb|ABO98761.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 248
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAE-TFED 68
+ V++GP++ S L Y+PL D++ ++ PD L+L GPL+D + + T+++
Sbjct: 1 VIVASGPFSCSSDLKYEPLNDMLDYVREENPDALVLCGPLVDAENAFVKRAECGGLTYDE 60
Query: 69 FYVKLIDSIVQPLEK 83
++D I L K
Sbjct: 61 VAKVVVDKIEDKLFK 75
>gi|328857937|gb|EGG07051.1| hypothetical protein MELLADRAFT_77651 [Melampsora larici-populina
98AG31]
Length = 636
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
+ ++ GP+T D L + PL+ L+ + D++IL+GP +D++HPL+ G + +T
Sbjct: 338 IKFAIACGPFTTDDNLDFLPLDALLTQLATEHLDLVILLGPFIDSNHPLIKTGDIDDT 395
>gi|396477047|ref|XP_003840181.1| similar to DNA polymerase alpha/primase associated subunit
[Leptosphaeria maculans JN3]
gi|312216752|emb|CBX96702.1| similar to DNA polymerase alpha/primase associated subunit
[Leptosphaeria maculans JN3]
Length = 692
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL--- 62
R L++ +++GPYT L + PL + + D +ILIGP LD HP + +G
Sbjct: 369 RPLTIMIASGPYTTDQNLDFFPLHTFLDNAAEAYADTVILIGPFLDAEHPQIRSGDFDPP 428
Query: 63 ------AETFEDFYVKLIDSIVQPLEK 83
T D + I S +Q K
Sbjct: 429 PNAIPDQATMTDLFKHHISSALQNFHK 455
>gi|170089217|ref|XP_001875831.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649091|gb|EDR13333.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 579
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPL----------- 56
+S+ V GPYT L++KP L+ +P+VL+L+GP +D+SH
Sbjct: 303 VSICVVCGPYTSDADLNFKPWRTLLPTLNATKPNVLLLVGPFIDSSHAKIKAGDSDLSAA 362
Query: 57 -LLNGSLAETFEDFYVKLIDSIV 78
+ G +A++ F V +SIV
Sbjct: 363 NIFKGRIADSIRAFLVASPESIV 385
>gi|326472630|gb|EGD96639.1| DNA polymerase alpha/primase associated subunit [Trichophyton
tonsurans CBS 112818]
gi|326483559|gb|EGE07569.1| DNA polymerase subunit alpha B [Trichophyton equinum CBS 127.97]
Length = 664
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L+ +AGPYT D L+++ L L ++ D LIL GP +D HPL+ G
Sbjct: 369 LNYMFAAGPYTTDDNLAFEALNTLCEKAAEECVDALILTGPFIDLEHPLIAAGDF 423
>gi|402081810|gb|EJT76955.1| DNA polymerase subunit alpha B [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 674
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ ++GPYT D L ++PL L D L+L GP +D HPL+ +G
Sbjct: 376 LNVMFASGPYTADDNLDFEPLHALCERAADTYADALVLNGPFIDIDHPLVASG 428
>gi|341878849|gb|EGT34784.1| CBN-DIV-1 protein [Caenorhabditis brenneri]
Length = 579
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETF--- 66
++ + GPYT D Y+ L +L+ V ++PD+LIL GP +D + L S T+
Sbjct: 318 IWFACGPYTAMDNCGYEHLCELLDKVVAEKPDILILAGPFIDRKNTFLNKPSFTITYDNL 377
Query: 67 -EDFYVKLIDSIVQ 79
ED V++ + ++
Sbjct: 378 LEDLLVRIKEKLIN 391
>gi|302662659|ref|XP_003022981.1| hypothetical protein TRV_02887 [Trichophyton verrucosum HKI 0517]
gi|291186956|gb|EFE42363.1| hypothetical protein TRV_02887 [Trichophyton verrucosum HKI 0517]
Length = 469
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L+ +AGPYT D L+++ L L ++ D LIL GP +D HPL+ G
Sbjct: 174 LNYMFAAGPYTTDDNLAFEALNALCEKAAEECVDALILTGPFIDLEHPLIAAGDF 228
>gi|302497329|ref|XP_003010665.1| B subunit of DNA polymerase alpha-primase complex [Arthroderma
benhamiae CBS 112371]
gi|291174208|gb|EFE30025.1| B subunit of DNA polymerase alpha-primase complex [Arthroderma
benhamiae CBS 112371]
Length = 469
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L+ +AGPYT D L+++ L L ++ D LIL GP +D HPL+ G
Sbjct: 174 LNYMFAAGPYTTDDNLAFEALNALCEKAAEECVDALILTGPFIDLEHPLIAAGDF 228
>gi|268563773|ref|XP_002647009.1| C. briggsae CBR-DIV-1 protein [Caenorhabditis briggsae]
Length = 584
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFEDF 69
++ + GPYT D Y+ L +L+ V ++PD+L+L GP +D + L +L T+++
Sbjct: 323 IWFACGPYTAMDNCGYEHLCELLDQVVAEKPDILVLAGPFVDRKNTFLNKPNLTITYDNL 382
Query: 70 YVKLIDSIVQPL 81
L+ I + L
Sbjct: 383 MEDLLCKIKEKL 394
>gi|429851305|gb|ELA26503.1| DNA polymerase alpha primase associated subunit [Colletotrichum
gloeosporioides Nara gc5]
Length = 724
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ ++GPYT D L ++PL L D L+L GP +D+ HPL+ G
Sbjct: 433 LNVIYASGPYTADDNLDFEPLHALCDQAADTYADALVLTGPFIDSEHPLIAMG 485
>gi|412987890|emb|CCO19286.1| predicted protein [Bathycoccus prasinos]
Length = 641
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLL---DTSHPLLLNGSLAETF 66
M + +GP+T +D L Y+PL+D++ + P +++L+GP + + +H L N + + F
Sbjct: 379 MLLFSGPFTANDDLMYEPLDDVLHEASSKNPSIVLLMGPFVSDENINHALTSNITYKQAF 438
Query: 67 EDFYVKLIDSIVQ 79
E +K +++ +
Sbjct: 439 EQIVMKKVEAFAK 451
>gi|310794290|gb|EFQ29751.1| DNA polymerase alpha/epsilon subunit B [Glomerella graminicola
M1.001]
Length = 659
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++ ++GPYT D L ++PL L D L+L GP +D+ HPL+ G
Sbjct: 366 LNVVYASGPYTADDNLDFEPLYALCDQAADTYADALVLTGPFIDSEHPLIATGDF 420
>gi|256083451|ref|XP_002577957.1| transforming growth factor-beta receptor type I [Schistosoma
mansoni]
gi|353230170|emb|CCD76341.1| putative transforming growth factor-beta receptor type I
[Schistosoma mansoni]
Length = 620
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETF 66
+L + V+ GPYT S++ L +L+ Q +P VLIL+GP +D+ HP + + S T+
Sbjct: 341 NLHIMVACGPYTLSNSHDPTGLFNLLRCVKQCKPHVLILLGPFVDSEHPGIQSYS-ETTY 399
Query: 67 EDFYVKLIDSIVQ 79
E+ + ++S+ +
Sbjct: 400 EELFQSRVNSVSE 412
>gi|76155616|gb|AAX26907.2| SJCHGC07999 protein [Schistosoma japonicum]
Length = 213
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETF 66
+L + V+ GPYT S++ L +L+ Q +P VLIL+GP +D+ HP + + S T+
Sbjct: 114 NLHIMVACGPYTLSNSHDPTGLFNLLRSVKQSKPHVLILLGPFVDSEHPGIQSYS-ETTY 172
Query: 67 EDFYVKLIDSIVQ 79
E+ + ++S+ +
Sbjct: 173 EELFQSRVNSVSE 185
>gi|171692981|ref|XP_001911415.1| hypothetical protein [Podospora anserina S mat+]
gi|170946439|emb|CAP73240.1| unnamed protein product [Podospora anserina S mat+]
Length = 593
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ ++GPYT D L ++PL+ L D L+L GP +D HPL+ +G
Sbjct: 351 LNVIFASGPYTADDNLDFEPLKALCNEAADIYVDALVLTGPFIDMEHPLIASG 403
>gi|50304257|ref|XP_452078.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641210|emb|CAH02471.1| KLLA0B12309p [Kluyveromyces lactis]
Length = 649
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Query: 1 MTLTRRSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLN 59
+TL + + + V+AG YT ++ L + LE + + +P +LI+ GP LD +H L+ +
Sbjct: 346 ITLNNQPMKVVVTAGSYTPANNLDFSNLEHFVDRINTSIKPHILIMFGPFLDITHQLISS 405
Query: 60 GSLAE---------TFEDFYVKLIDSIVQ 79
G++ + T ++ ++K+I I++
Sbjct: 406 GNIPDFPNLKQQPKTLDEVFIKVIAPILK 434
>gi|374107009|gb|AEY95917.1| FADL299Cp [Ashbya gossypii FDAG1]
Length = 645
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQ--EPDVLILIGPLLDTSHPLLLNGSL 62
+ + V++GPYT S ++ + LE+ I L V + P VLI+ GP LD +HPL+ G +
Sbjct: 351 MKVLVTSGPYTPSTSIDFNHLEEFI-LRVNEHIRPHVLIMFGPFLDVTHPLVETGQI 406
>gi|302307213|ref|NP_983797.2| ADL299Cp [Ashbya gossypii ATCC 10895]
gi|299788891|gb|AAS51621.2| ADL299Cp [Ashbya gossypii ATCC 10895]
Length = 645
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQ--EPDVLILIGPLLDTSHPLLLNGSL 62
+ + V++GPYT S ++ + LE+ I L V + P VLI+ GP LD +HPL+ G +
Sbjct: 351 MKVLVTSGPYTPSTSIDFNHLEEFI-LRVNEHIRPHVLIMFGPFLDVTHPLVETGQI 406
>gi|393233321|gb|EJD40894.1| DNA polymerase alpha, subunit B [Auricularia delicata TFB-10046
SS5]
Length = 529
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 12 VSAGPYTQSDTLSYKPLEDLI--ALTVQQEPDVLILIGPLLDTSHPLLLNGSLAE-TFED 68
V+AGPYT S ++PL+ L+ L Q P L+L+GP +D +H L+ G + E E
Sbjct: 280 VAAGPYTYSKDFKFEPLQRLLQRVLQSQPRPTTLLLLGPFVDANHELIKLGDVDEHPRET 339
Query: 69 FYVKLIDSI 77
F +++D +
Sbjct: 340 FRREVLDRL 348
>gi|367025023|ref|XP_003661796.1| hypothetical protein MYCTH_2090680 [Myceliophthora thermophila ATCC
42464]
gi|347009064|gb|AEO56551.1| hypothetical protein MYCTH_2090680 [Myceliophthora thermophila ATCC
42464]
Length = 658
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ ++GPYT D L ++PL L + D ++L GP +D HPL+ G
Sbjct: 361 LTVLFASGPYTADDNLDFEPLHTLCSEAADTFVDAVVLTGPFIDVEHPLIATG 413
>gi|17554432|ref|NP_499268.1| Protein DIV-1 [Caenorhabditis elegans]
gi|21431778|sp|Q21625.3|DPOA2_CAEEL RecName: Full=DNA polymerase alpha subunit B; AltName:
Full=Division delayed protein 1
gi|18136205|emb|CAA83467.2| Protein DIV-1 [Caenorhabditis elegans]
Length = 581
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 4 TRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLL----LN 59
T + ++ + GPYT +D Y+ L +L+ V ++PD+L+L GP +D + L N
Sbjct: 317 TDTTKEIWFACGPYTATDNCGYEHLCELLDKVVAEKPDILMLAGPFVDKKNTFLNKPTFN 376
Query: 60 GSLAETFEDFYVKLIDSIV 78
+ ED +K+ +++V
Sbjct: 377 ITYDNLLEDLLLKVKETLV 395
>gi|630708|pir||S43564 R01H10.1 protein (clone R01H10) - Caenorhabditis elegans
Length = 475
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 4 TRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLL----LN 59
T + ++ + GPYT +D Y+ L +L+ V ++PD+L+L GP +D + L N
Sbjct: 317 TDTTKEIWFACGPYTATDNCGYEHLCELLDKVVAEKPDILMLAGPFVDKKNTFLNKPTFN 376
Query: 60 GSLAETFEDFYVKLIDSIV 78
+ ED +K+ +++V
Sbjct: 377 ITYDNLLEDLLLKVKETLV 395
>gi|367015348|ref|XP_003682173.1| hypothetical protein TDEL_0F01510 [Torulaspora delbrueckii]
gi|359749835|emb|CCE92962.1| hypothetical protein TDEL_0F01510 [Torulaspora delbrueckii]
Length = 666
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIA-LTVQQEPDVLILIGPLLDTSHPLLLNGSL---- 62
L + V GP+T +D+ + L + + L + +P LI+ GPL+D +HP++ G+L
Sbjct: 366 LKVTVITGPFTSNDSFDFSHLTNFVERLNTEIKPHALIMFGPLIDVTHPMIAAGTLPHFP 425
Query: 63 -----AETFEDFYVKLIDSIVQ 79
+T +D ++K++ I++
Sbjct: 426 HLKSQPQTLDDLFLKVMAPILK 447
>gi|193631895|ref|XP_001945319.1| PREDICTED: hypothetical protein LOC100168132 [Acyrthosiphon pisum]
Length = 562
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
++ +L++ V+AGP+ + K L+ L+ T++ E +LIL GP+ D + LN +
Sbjct: 292 FSKGNLNVMVAAGPFFSELSPHGKLLKSLVQKTIELEAQLLILFGPIFDADFGMQLNKTT 351
Query: 63 AETFEDFYVKLIDSIVQPL 81
+E + Y +++++ ++PL
Sbjct: 352 SEDVQKCYDEVLEATLKPL 370
>gi|443709652|gb|ELU04244.1| hypothetical protein CAPTEDRAFT_95153, partial [Capitella teleta]
Length = 465
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSH 54
L + + GP+ SD+ S++PL+DL+ + P V IL+GP LD+ +
Sbjct: 221 LDIVTAVGPFMTSDSTSFEPLDDLLKYVTEHSPRVCILLGPFLDSKN 267
>gi|389641335|ref|XP_003718300.1| DNA polymerase subunit alpha B [Magnaporthe oryzae 70-15]
gi|351640853|gb|EHA48716.1| DNA polymerase subunit alpha B [Magnaporthe oryzae 70-15]
Length = 666
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
L++ ++GPY+ D L ++PL + D L+L GP +D HPL+ G
Sbjct: 371 LNVMFASGPYSADDNLDFEPLHTICNQAADTYADALVLTGPFIDIDHPLIAAGDF 425
>gi|440466804|gb|ELQ36048.1| DNA polymerase subunit alpha B [Magnaporthe oryzae Y34]
gi|440480288|gb|ELQ60962.1| DNA polymerase subunit alpha B [Magnaporthe oryzae P131]
Length = 666
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ ++GPY+ D L ++PL + D L+L GP +D HPL+ G
Sbjct: 371 LNVMFASGPYSADDNLDFEPLHTICNQAADTYADALVLTGPFIDIDHPLIAAG 423
>gi|363755740|ref|XP_003648085.1| hypothetical protein Ecym_7448 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892121|gb|AET41268.1| hypothetical protein Ecym_7448 [Eremothecium cymbalariae
DBVPG#7215]
Length = 652
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIA-LTVQQEPDVLILIGPLLDTSHPLLLNGSLAE-- 64
+ + V++GPYT ++ + + + + + +P VLI+ GP LD SHPL+ G + +
Sbjct: 357 MKIVVTSGPYTPKNSFDFTNFSEFVERINTKIKPHVLIMFGPFLDISHPLIKTGGIPKFP 416
Query: 65 -------TFEDFYVKLIDSIVQPLE 82
T ++ ++K++ I++ L
Sbjct: 417 NLKFQPRTMDEIFLKVLAPILKNLN 441
>gi|367037905|ref|XP_003649333.1| hypothetical protein THITE_2107832 [Thielavia terrestris NRRL 8126]
gi|346996594|gb|AEO62997.1| hypothetical protein THITE_2107832 [Thielavia terrestris NRRL 8126]
Length = 515
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L++ ++GPYT D L ++PL L D ++L GP +D HPL+ G
Sbjct: 207 LTILFASGPYTADDNLDFEPLHTLCNEAADTFVDAVVLTGPFIDIDHPLIAAG 259
>gi|260822499|ref|XP_002606639.1| hypothetical protein BRAFLDRAFT_120094 [Branchiostoma floridae]
gi|229291983|gb|EEN62649.1| hypothetical protein BRAFLDRAFT_120094 [Branchiostoma floridae]
Length = 521
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLIL 45
+ + V+AGP+T SD+L+Y+PLEDL+ + +PDV +L
Sbjct: 347 VQVLVAAGPFTPSDSLAYEPLEDLLKYLKRDQPDVCVL 384
>gi|406603654|emb|CCH44807.1| hypothetical protein BN7_4376 [Wickerhamomyces ciferrii]
Length = 636
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQ-EPDVLILIGPLLDTSHPLLLNGSL 62
L + GPYT S L + LE+ + + +P V+I+ GP +D SHPL+ +G+L
Sbjct: 338 LKILCINGPYTSSKDLDFTYLENFVTKVNNEIQPHVVIMFGPFIDISHPLVSSGNL 393
>gi|268637911|ref|XP_640231.2| DNA polymerase alpha subunit B [Dictyostelium discoideum AX4]
gi|284018079|sp|Q54S08.2|DPOA2_DICDI RecName: Full=DNA polymerase alpha subunit B
gi|256012935|gb|EAL66225.2| DNA polymerase alpha subunit B [Dictyostelium discoideum AX4]
Length = 623
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 8 LSMFVSAGPYT-QSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTS--HPLLLNGSLAE 64
+++ +++GP+ Q T Y PL+DL + ++P +L L+GP +D S H + + +E
Sbjct: 370 INVMIASGPFDLQKSTPDYTPLDDLCNVVSNKKPHILFLMGPFIDESNVHIKKYSETFSE 429
Query: 65 TFEDFYVKLIDSI 77
F + KL D+I
Sbjct: 430 LFNNLMKKLNDNI 442
>gi|255086299|ref|XP_002509116.1| DNA polymerase [Micromonas sp. RCC299]
gi|226524394|gb|ACO70374.1| DNA polymerase [Micromonas sp. RCC299]
Length = 658
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 9 SMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSH 54
S+ +++GP+T S LS++P DL+ + PD ++L GP +D H
Sbjct: 357 SVVIASGPFTCSSDLSFEPFADLLRYCEDKRPDSVVLCGPFVDCDH 402
>gi|330790352|ref|XP_003283261.1| hypothetical protein DICPUDRAFT_96307 [Dictyostelium purpureum]
gi|325086808|gb|EGC40192.1| hypothetical protein DICPUDRAFT_96307 [Dictyostelium purpureum]
Length = 606
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 8 LSMFVSAGPYTQSD-TLSYKPLEDLIALTVQQEPDVLILIGPLL-DTSHPLLLNGSLAET 65
+++ V++GP+ S + Y PL DL ++ +++P LIL+GP + DT+H L +ET
Sbjct: 359 ITVMVASGPFDLSKPVVDYVPLHDLCSIVSERKPHCLILMGPFIDDTNHHL---SKYSET 415
Query: 66 FEDFYVKLIDSIVQPL 81
F + + L+ +I + +
Sbjct: 416 FTEIFNNLMKTISEKI 431
>gi|254568602|ref|XP_002491411.1| B subunit of DNA polymerase alpha-primase complex [Komagataella
pastoris GS115]
gi|238031208|emb|CAY69131.1| B subunit of DNA polymerase alpha-primase complex [Komagataella
pastoris GS115]
gi|328352078|emb|CCA38477.1| DNA polymerase subunit alpha B [Komagataella pastoris CBS 7435]
Length = 640
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNG 60
L S+ V +GPYT S + Y LE + L + +P +I+ GP LD +HP + +G
Sbjct: 339 NLDGSSMKTTVLSGPYTPSTKIDYSLLESFVQKLNTEIKPHSVIMFGPFLDITHPSIRDG 398
Query: 61 SL----------AETFEDFYVKLIDSIVQPLE 82
S+ T ++F+ +I I++ ++
Sbjct: 399 SIESVPELQGKKVATLDNFFRAVITPILKKID 430
>gi|395742479|ref|XP_002821574.2| PREDICTED: DNA polymerase alpha subunit B-like, partial [Pongo
abelii]
Length = 337
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLIL 45
+ V+ GPYT SD+++Y PL DLIA+ PDV IL
Sbjct: 302 VLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCIL 337
>gi|198420427|ref|XP_002131276.1| PREDICTED: similar to Polymerase (DNA directed), alpha 2 (70kD
subunit) [Ciona intestinalis]
Length = 535
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 31/46 (67%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTS 53
++ V++GP+T SD+ +KPL D + + + +P + I IGPL++ +
Sbjct: 297 FTIMVASGPFTTSDSDDHKPLLDFLDVVTKMQPSLTIFIGPLVEKA 342
>gi|366988531|ref|XP_003674032.1| hypothetical protein NCAS_0A10930 [Naumovozyma castellii CBS 4309]
gi|342299895|emb|CCC67651.1| hypothetical protein NCAS_0A10930 [Naumovozyma castellii CBS 4309]
Length = 679
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 10/83 (12%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNGSL--- 62
S+ + +++GPY D+++ L D + L +P VLI+ GP +D ++PL+ GS+
Sbjct: 382 SMKVIITSGPYFAEDSINTDLLLDFVNRLNNDIKPHVLIMFGPFIDVTNPLIAKGSIPSF 441
Query: 63 ------AETFEDFYVKLIDSIVQ 79
+T ++ ++K+I I++
Sbjct: 442 PNLKIQPKTLDEIFIKVITPILR 464
>gi|354546489|emb|CCE43219.1| hypothetical protein CPAR2_208640 [Candida parapsilosis]
Length = 642
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
+ L + V++GPY+ S+ L Y LE+L+ + Q P+++IL GP +D S+ + G+
Sbjct: 329 QGLKILVASGPYSNSNKLQYTKLENLVDKINTQMLPNLVILNGPFIDLSNKEVEEGNF 386
>gi|410082157|ref|XP_003958657.1| hypothetical protein KAFR_0H01120 [Kazachstania africana CBS 2517]
gi|372465246|emb|CCF59522.1| hypothetical protein KAFR_0H01120 [Kazachstania africana CBS 2517]
Length = 679
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQ-EPDVLILIGPLLDTSHPLLLNGS 61
L +S + V++GPY + LE+ + Q+ +P ++I+ GP +D ++P+++ G+
Sbjct: 373 LDNKSEKILVTSGPYIPDNNFDLSHLEEFVERVNQEIKPHIIIMFGPFIDVTNPIIMAGN 432
Query: 62 L---------AETFEDFYVKLIDSIVQPLE 82
+ T + + KLI I++ +
Sbjct: 433 IPHFQNLKQQPRTLNELFTKLITPILKKIN 462
>gi|321465942|gb|EFX76940.1| hypothetical protein DAPPUDRAFT_321802 [Daphnia pulex]
Length = 476
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETFE 67
L++ V+ GP+T SD L + PL + I P ++I++GP LD + + +G L T++
Sbjct: 229 LNVMVACGPFTLSDDLEFAPLVEFIQQINTILPHLVIIMGPFLDVKNKKVESGELDHTYQ 288
Query: 68 DFY 70
+ +
Sbjct: 289 EQF 291
>gi|209876758|ref|XP_002139821.1| DNA polymerase epsilon subunit B family protein [Cryptosporidium
muris RN66]
gi|209555427|gb|EEA05472.1| DNA polymerase epsilon subunit B family protein [Cryptosporidium
muris RN66]
Length = 598
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAE--- 64
+ V +GP+T + L + L ++ +++P VLIL+GP LD + ++ N L
Sbjct: 321 VQCIVFSGPFTNNKYLDFSYLTRILDYVSKEKPHVLILMGPFLDARNEIINNADLYNHDT 380
Query: 65 ----TFEDFYVKLIDSIVQPLEK 83
+FE Y L +++ K
Sbjct: 381 GSFLSFESIYRNLFSNLISQFAK 403
>gi|403376518|gb|EJY88238.1| Polymerase (DNA directed), alpha 2 [Oxytricha trifallax]
Length = 611
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL--- 62
+ L + ++ GPYT + LSY L D + + +P +I++GP +D ++ + +G L
Sbjct: 342 KPLGLMIAKGPYTFTKNLSYSGLYDFLGAVRKNQPHAVIMMGPFVDYNNSDINDGCLFYD 401
Query: 63 ------AETFEDFYVKLIDSIVQ 79
++E+ + L+++I +
Sbjct: 402 GEGGKVFASYEEIFQDLVETIAK 424
>gi|365982203|ref|XP_003667935.1| hypothetical protein NDAI_0A05370 [Naumovozyma dairenensis CBS 421]
gi|343766701|emb|CCD22692.1| hypothetical protein NDAI_0A05370 [Naumovozyma dairenensis CBS 421]
Length = 705
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNG 60
++ + V++GPY + PL D + + Q +P V+I+ GP +D ++PL+ +G
Sbjct: 401 NFNNETMKVIVTSGPYFSETNIDMTPLIDFVDKINNQVKPHVVIMFGPFIDLTNPLISSG 460
Query: 61 SL 62
S+
Sbjct: 461 SI 462
>gi|146189563|emb|CAM91783.1| hypothetical protein [Platynereis dumerilii]
Length = 139
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 40 PDVLILIGPLLDTSHPLLLNGSLAETFEDFYVKLIDSIVQPLEKPG 85
PDV IL GP LD HP + G+L T+E+F+ I + + + G
Sbjct: 6 PDVCILCGPFLDYKHPEIEKGNLETTYEEFFSTTIAQLSSAITRNG 51
>gi|260945677|ref|XP_002617136.1| hypothetical protein CLUG_02580 [Clavispora lusitaniae ATCC 42720]
gi|238848990|gb|EEQ38454.1| hypothetical protein CLUG_02580 [Clavispora lusitaniae ATCC 42720]
Length = 650
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
+F+++GP++ TL+Y LE L+ + +P+V+IL+GP LD ++ + +G +
Sbjct: 330 FKVFIASGPFSNQHTLNYSKLESLVDHINDNIKPEVVILLGPFLDITNKSVESGDI 385
>gi|281204243|gb|EFA78439.1| hypothetical protein PPL_09091 [Polysphondylium pallidum PN500]
Length = 606
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 30/52 (57%)
Query: 5 RRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPL 56
+S+ + ++GP++ Y PL+D + L + + +++IL GP +D H +
Sbjct: 364 EKSVHIMFASGPFSLHHCFDYTPLDDFLKLVEKNQANLVILFGPFIDEGHDM 415
>gi|320581839|gb|EFW96058.1| B subunit of DNA polymerase alpha-primase complex [Ogataea
parapolymorpha DL-1]
Length = 603
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNGSLA-- 63
++ + +AGPYT L Y L + + + + PD +++ GP +D +H + +G+L
Sbjct: 316 NMKVVFTAGPYTPQRELEYTHLAEFVDKMNNEVRPDTVVMFGPFVDVNHAQVADGTLHFD 375
Query: 64 ------ETFEDFYVKLIDSIVQPLE 82
T +D + ++ I++ LE
Sbjct: 376 GLEKQPATLDDVFRAVVAPILRKLE 400
>gi|344304974|gb|EGW35206.1| DNA polymerase alpha-primase complex B subunit [Spathaspora
passalidarum NRRL Y-27907]
Length = 592
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 5 RRSLSMFVSAGPYTQSDTLSYKPLEDLIAL-TVQQEPDVLILIGPLLDTSHPLLLNGSL 62
++ L + V++GP++ S TL+Y L +L+ L + P+V+IL GP LD ++ + G
Sbjct: 280 KQGLKVLVASGPFSNSQTLNYDRLNNLVELINTKIFPNVVILNGPFLDITNKSVEEGEF 338
>gi|241949265|ref|XP_002417355.1| DNA polymerase alpha, subunit B, putative [Candida dubliniensis
CD36]
gi|223640693|emb|CAX45004.1| DNA polymerase alpha, subunit B, putative [Candida dubliniensis
CD36]
Length = 660
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 4 TRRSLSMFVSAGPYTQSDTLSYKPLEDLIAL-TVQQEPDVLILIGPLLDTSHPLLLNGSL 62
+ L + +++GP++ S+ L+Y L+ L+ L + P V+IL GP LD + ++ +G +
Sbjct: 345 NNQGLKVLIASGPFSNSNKLNYDKLDQLVDLINTKILPQVVILNGPFLDIGNKVVESGDI 404
Query: 63 AETFEDFYVKLIDSIVQPLEKP 84
E K +D + + + P
Sbjct: 405 VIDSEQTQPKTLDDLFKAIVTP 426
>gi|358336737|dbj|GAA55174.1| DNA polymerase alpha subunit B [Clonorchis sinensis]
Length = 823
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 5 RRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAE 64
+ +LS+ V+ GPYT S + L L+ + P VLI+IGP +D H +
Sbjct: 547 KNALSVMVACGPYTLSASNDPSLLLTLLRAVKKNRPHVLIMIGPFVDCQHS-AVQVYRDS 605
Query: 65 TFEDFYVKLIDSIVQ 79
T+E+ + I+S+ +
Sbjct: 606 TYEELFHTRINSVAE 620
>gi|448511801|ref|XP_003866617.1| Pol12 protein [Candida orthopsilosis Co 90-125]
gi|380350955|emb|CCG21178.1| Pol12 protein [Candida orthopsilosis Co 90-125]
Length = 645
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNG------ 60
L + V++GPY+ S+ L Y LE L+ + + +P+V+IL GP +D ++ + G
Sbjct: 334 LKIVVASGPYSNSNKLQYSKLEGLVEKINNEIQPNVVILNGPFIDLTNKDVEEGRFNFSR 393
Query: 61 -SLAETFEDFYVKLIDSIVQPLE 82
L + +D + LI I++ ++
Sbjct: 394 DQLPKNLDDVFRLLITPILRKVD 416
>gi|150865942|ref|XP_001385361.2| DNA polymerase alpha-primase complex B subunit [Scheffersomyces
stipitis CBS 6054]
gi|149387198|gb|ABN67332.2| DNA polymerase alpha-primase complex B subunit [Scheffersomyces
stipitis CBS 6054]
Length = 685
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLIA-LTVQQEPDVLILIGPLLDTSHPLLLNGSLA--- 63
L + V+AGP++ +L+Y LE L + +P V++L GP +D ++ ++ +G +
Sbjct: 368 LKIMVAAGPFSNHHSLNYSKLEKLTEIINNSMKPHVVVLNGPFIDITNSMVASGDIEIPD 427
Query: 64 -----ETFEDFYVKLIDSIVQPLE 82
++ + KLI I++ ++
Sbjct: 428 DKSPPRNLDELFKKLISPILRKID 451
>gi|118382991|ref|XP_001024651.1| hypothetical protein TTHERM_00614820 [Tetrahymena thermophila]
gi|89306418|gb|EAS04406.1| hypothetical protein TTHERM_00614820 [Tetrahymena thermophila
SB210]
Length = 595
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 10 MFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSL-----AE 64
+ V+AGP++ + Y ++++ + ++ LIL+GP LD + +L +GS+
Sbjct: 326 IMVAAGPFSTVMSTQYTSFDNILHVAKTKKVSTLILLGPFLDIKNEILKDGSIIINSKEY 385
Query: 65 TFEDFYVKLIDSIVQPLE 82
TFE L + V+ LE
Sbjct: 386 TFEQLQNSLFEKAVKELE 403
>gi|448080138|ref|XP_004194551.1| Piso0_005051 [Millerozyma farinosa CBS 7064]
gi|359375973|emb|CCE86555.1| Piso0_005051 [Millerozyma farinosa CBS 7064]
Length = 699
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 39/74 (52%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
+ L + ++AGP+ ++T+ + + P ++IL+GP +D ++ L+ +G +
Sbjct: 376 QGLKVILAAGPFCNNNTIDFTKFSQFVDKINSLNPHIVILVGPFIDITNSLVRSGDIDLQ 435
Query: 66 FEDFYVKLIDSIVQ 79
E VK +D + +
Sbjct: 436 NEKKQVKDLDDLFK 449
>gi|238878822|gb|EEQ42460.1| hypothetical protein CAWG_00671 [Candida albicans WO-1]
Length = 664
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 4 TRRSLSMFVSAGPYTQSDTLSYKPLEDLIAL-TVQQEPDVLILIGPLLDTSHPLLLNGSL 62
+ L + +++GP++ S+ L+Y L+ L+ L + P V+IL GP LD + ++ +G +
Sbjct: 347 NNQGLKVLIASGPFSNSNKLNYDKLDKLVDLINTKILPQVVILNGPFLDIGNKVVESGEI 406
>gi|68488831|ref|XP_711762.1| hypothetical protein CaO19.10314 [Candida albicans SC5314]
gi|46433085|gb|EAK92540.1| hypothetical protein CaO19.10314 [Candida albicans SC5314]
Length = 664
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 4 TRRSLSMFVSAGPYTQSDTLSYKPLEDLIAL-TVQQEPDVLILIGPLLDTSHPLLLNGSL 62
+ L + +++GP++ S+ L+Y L+ L+ L + P V+IL GP LD + ++ +G +
Sbjct: 347 NNQGLKVLIASGPFSNSNKLNYDKLDKLVDLINTKILPQVVILNGPFLDIGNKVVESGEI 406
>gi|68488876|ref|XP_711738.1| hypothetical protein CaO19.2796 [Candida albicans SC5314]
gi|46433060|gb|EAK92516.1| hypothetical protein CaO19.2796 [Candida albicans SC5314]
Length = 664
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 4 TRRSLSMFVSAGPYTQSDTLSYKPLEDLIAL-TVQQEPDVLILIGPLLDTSHPLLLNGSL 62
+ L + +++GP++ S+ L+Y L+ L+ L + P V+IL GP LD + ++ +G +
Sbjct: 347 NNQGLKVLIASGPFSNSNKLNYDKLDKLVDLINTKILPQVVILNGPFLDIGNKVVESGEI 406
>gi|443894558|dbj|GAC71906.1| DNA polymerase alpha-primase complex, polymerase-associated subunit
B [Pseudozyma antarctica T-34]
Length = 711
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLI----------ALTVQQEPDVLILIGPLLDT 52
L +L++ V+AGP+T L +KP L+ A + PD LIL+GP +
Sbjct: 413 LNGAALNILVAAGPFTSEHDLDFKPWHALMDQLDAGGIPCAQGRRGVPDTLILMGPFVSA 472
Query: 53 SHPLL 57
HP +
Sbjct: 473 DHPAV 477
>gi|145494302|ref|XP_001433145.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400262|emb|CAK65748.1| unnamed protein product [Paramecium tetraurelia]
Length = 481
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 7 SLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEP--DVLILIGPLLDTSHPLLLNGSLAE 64
S+ M ++AGP+ + D YK L L+ +++ D+L+L+GP+LD + L+ E
Sbjct: 228 SIVMVIAAGPFEKEDKFGYKGLFALVEKIKKKQISCDILMLLGPILDIKNQENLDKYNYE 287
Query: 65 TFEDFYVKLIDSIVQPLEK 83
+E+F+ ++ +I++ + +
Sbjct: 288 -YEEFFEIILQAIMEEIPR 305
>gi|255729866|ref|XP_002549858.1| hypothetical protein CTRG_04155 [Candida tropicalis MYA-3404]
gi|240132927|gb|EER32484.1| hypothetical protein CTRG_04155 [Candida tropicalis MYA-3404]
Length = 670
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
+ L + +++GP++ S+ L++ LE LI + + P+V+IL GP LD ++ ++ +G +
Sbjct: 355 QGLKLLIASGPFSNSNKLNFDKLELLINQINTKILPNVVILNGPFLDLTNKVIESGDI 412
>gi|444315936|ref|XP_004178625.1| hypothetical protein TBLA_0B02640 [Tetrapisispora blattae CBS 6284]
gi|387511665|emb|CCH59106.1| hypothetical protein TBLA_0B02640 [Tetrapisispora blattae CBS 6284]
Length = 673
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 4 TRRSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNGSL 62
T R+ + V++GPYT + + L + + + +P +++ GP +D ++PL+ +G+L
Sbjct: 367 TDRTSKIIVTSGPYTPATSFDLTYLAEFVDKVNTSIKPHAIVMFGPFIDVTNPLIASGNL 426
>gi|294659121|ref|XP_461461.2| DEHA2F25806p [Debaryomyces hansenii CBS767]
gi|202953633|emb|CAG89880.2| DEHA2F25806p [Debaryomyces hansenii CBS767]
Length = 702
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNGSLAETF 66
L +FV++GPY+ +L+Y L L+ + + +P ++IL GP +D ++ + G +
Sbjct: 381 LKLFVASGPYSNQHSLNYDRLNALVDRINTEIKPHLVILFGPFIDITNVSVSKGDIELPD 440
Query: 67 EDFYVKLIDSIVQPLEKP 84
E K +D + + P
Sbjct: 441 EKHQPKDLDEVFRKCITP 458
>gi|344228522|gb|EGV60408.1| hypothetical protein CANTEDRAFT_110389 [Candida tenuis ATCC 10573]
Length = 673
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLL-------- 58
+ ++AGPY+ + L+Y + + + +PD+++L GP +D ++ +L
Sbjct: 352 IKFVMAAGPYSNQNVLNYSKFSSFVDRINSEIQPDLVVLFGPFVDLNNKSVLEGDIEFPD 411
Query: 59 NGSLAETFEDFYVKLIDSIVQ 79
NG + ++ + KL+ I++
Sbjct: 412 NGEEPQNLDEVFKKLVTPILK 432
>gi|149247859|ref|XP_001528317.1| hypothetical protein LELG_00837 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448271|gb|EDK42659.1| hypothetical protein LELG_00837 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 673
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 8 LSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNGSLAE 64
L M +++GPY+ + L Y E + + P+V+IL GP LD ++ + G ++
Sbjct: 345 LKMVIASGPYSNLNKLDYSKFEKFVDKMNNDIRPNVIILNGPFLDLTNKAVEEGDFSD 402
>gi|448084616|ref|XP_004195650.1| Piso0_005051 [Millerozyma farinosa CBS 7064]
gi|359377072|emb|CCE85455.1| Piso0_005051 [Millerozyma farinosa CBS 7064]
Length = 699
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/74 (20%), Positives = 39/74 (52%)
Query: 6 RSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAET 65
+ + + ++AGP+ ++T+ + + P ++IL+GP +D ++ L+ +G +
Sbjct: 376 QGMKVILAAGPFCNNNTIDFTKFSQFVDKINSLNPHIVILVGPFIDITNNLVRSGDIDLQ 435
Query: 66 FEDFYVKLIDSIVQ 79
E V+ +D + +
Sbjct: 436 NEKKQVRDLDDLFR 449
>gi|403217008|emb|CCK71503.1| hypothetical protein KNAG_0H00880 [Kazachstania naganishii CBS
8797]
Length = 672
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLIA-LTVQQEPDVLILIGPLLDTSHPLLLNG 60
+L S + V+AGPY ++L L D + + + +P ++I+ GP +D ++ +++ G
Sbjct: 365 SLKGESAKIVVTAGPYFPDNSLDISYLSDFVERVNNESKPHIVIMYGPFIDVTNSMIMEG 424
Query: 61 SL 62
+
Sbjct: 425 RI 426
>gi|156836867|ref|XP_001642474.1| hypothetical protein Kpol_264p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156113008|gb|EDO14616.1| hypothetical protein Kpol_264p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 670
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 3 LTRRSLSMFVSAGPYTQSDTLSYKPLEDLI-ALTVQQEPDVLILIGPLLDTSHPLLLNGS 61
L +S+ + +++GPY ++ + L + + + +P +LI+ GP +D ++PL+ G+
Sbjct: 367 LDNKSMKVVITSGPYFPDNSFDLEYLVSFVEKINNEIKPHILIMFGPFVDVTNPLVAKGA 426
Query: 62 L 62
+
Sbjct: 427 I 427
>gi|300120189|emb|CBK19743.2| unnamed protein product [Blastocystis hominis]
Length = 335
Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 31/46 (67%)
Query: 2 TLTRRSLSMFVSAGPYTQSDTLSYKPLEDLIALTVQQEPDVLILIG 47
+L ++S++V+ GP++ D ++PL+ +AL +++P VL+L+
Sbjct: 197 SLASETVSLWVARGPFSCRDDGDFEPLKTFLALAKKEKPSVLLLVA 242
>gi|67607376|ref|XP_666810.1| DNA polymerase alpha subunit [Cryptosporidium hominis TU502]
gi|54657875|gb|EAL36583.1| DNA polymerase alpha subunit [Cryptosporidium hominis]
Length = 621
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 12 VSAGPYT-QSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAE------ 64
+ +GP+T + L+Y L +++ ++P VLIL+GP +D + + G L +
Sbjct: 337 IFSGPFTTDKENLNYDYLNEILNYANIEKPHVLILLGPFIDVRNESIKKGDLFDFGSNTF 396
Query: 65 -TFEDFYVKLIDSIVQPLEK 83
TFED + + I + ++ +
Sbjct: 397 ITFEDLFRRNIYNSIESFAR 416
>gi|66359634|ref|XP_626995.1| DNA dependent DNA polymerase alpha subunit, inactive calcineurin
like phosphatase subunit [Cryptosporidium parvum Iowa
II]
gi|46228445|gb|EAK89315.1| DNA dependent DNA polymerase alpha subunit, inactive calcineurin
like phosphatase subunit [Cryptosporidium parvum Iowa
II]
Length = 621
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 12 VSAGPYT-QSDTLSYKPLEDLIALTVQQEPDVLILIGPLLDTSHPLLLNGSLAE------ 64
+ +GP+T + L+Y L +++ ++P VLIL+GP +D + + G L +
Sbjct: 337 IFSGPFTTDKENLNYDYLNEILNYANIEKPHVLILLGPFIDVRNESIKKGDLFDFGSNTF 396
Query: 65 -TFEDFYVKLIDSIVQPLEK 83
TFED + + I + ++ +
Sbjct: 397 ITFEDLFRRNIYNSIESFAR 416
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,300,841,138
Number of Sequences: 23463169
Number of extensions: 44610907
Number of successful extensions: 170620
Number of sequences better than 100.0: 350
Number of HSP's better than 100.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 170274
Number of HSP's gapped (non-prelim): 350
length of query: 86
length of database: 8,064,228,071
effective HSP length: 56
effective length of query: 30
effective length of database: 6,750,290,607
effective search space: 202508718210
effective search space used: 202508718210
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)