BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14900
(245 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ULH7|MKL2_HUMAN MKL/myocardin-like protein 2 OS=Homo sapiens GN=MKL2 PE=1 SV=3
Length = 1088
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 99/161 (61%), Gaps = 18/161 (11%)
Query: 48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
LK+P AFH Q + LERA+T + LK KI++RP R+ELVR HIL +E F +PSL Q
Sbjct: 64 LKSPAAFHEQIKSLERARTENFLKHKIRSRPDRSELVRMHIL--EET--FAEPSLQATQM 119
Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
+L + RLAD LN+++A RPGP+EL++KNIL P++ +VKE +I G+ P
Sbjct: 120 KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVDSSVKEAIIGV-----GKEDYPHT 170
Query: 168 PDHYMTLDDDSRSSEATSP--PSLSGEAGGVRASSPPSLSE 206
+ + D+D SS+A SP P+ G + S P +SE
Sbjct: 171 QGDF-SFDED--SSDALSPDQPASQESQGSAASPSEPKVSE 208
>sp|Q8AYC1|MRTFB_XENLA Myocardin-related transcription factor B OS=Xenopus laevis GN=mrtfb
PE=2 SV=1
Length = 1067
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 96/154 (62%), Gaps = 17/154 (11%)
Query: 48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
LK+P AFH Q + LERA+T + LK KI++RP R+ELVR HIL +E + +PSL Q
Sbjct: 70 LKSPAAFHEQIKSLERARTENFLKHKIRSRPNRSELVRMHIL--EETLA--EPSLQATQL 125
Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
+L + RLAD LN+++A RPGPLEL++KNIL P++ +VKE + Q++ PE
Sbjct: 126 KLKRARLADDLNEKIAQRPGPLELVEKNIL----PVDLSVKEAITV------SQTNLPEN 175
Query: 168 PDHYMTLDDDSRSSEATSPPSLSGEAGGVRASSP 201
D TL D SS+A SP + + A+SP
Sbjct: 176 LD---TLSFDEDSSDALSPEQPASQESQGSAASP 206
>sp|Q969V6|MKL1_HUMAN MKL/myocardin-like protein 1 OS=Homo sapiens GN=MKL1 PE=1 SV=1
Length = 931
Score = 108 bits (269), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 75/106 (70%), Gaps = 8/106 (7%)
Query: 48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
LK+P AFH QRR LERA+T D LK KI++RP R+ELVR HIL +PSL KQ
Sbjct: 4 LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERSELVRMHILEETSA----EPSLQAKQL 59
Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIA 153
+L + RLAD LN+++A RPGP+EL++KNIL P+E ++KE +I
Sbjct: 60 KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVESSLKEAIIV 101
>sp|Q8K4J6|MKL1_MOUSE MKL/myocardin-like protein 1 OS=Mus musculus GN=Mkl1 PE=1 SV=2
Length = 964
Score = 108 bits (269), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 74/106 (69%), Gaps = 8/106 (7%)
Query: 48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
LK+P AFH QRR LERA+T D LK KI++RP R ELVR HIL +PSL KQ
Sbjct: 39 LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERAELVRMHILEETSA----EPSLQAKQL 94
Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIA 153
+L + RLAD LN+++A RPGP+EL++KNIL P+E ++KE +I
Sbjct: 95 KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVESSLKEAIIV 136
>sp|P59759|MKL2_MOUSE MKL/myocardin-like protein 2 OS=Mus musculus GN=Mkl2 PE=1 SV=1
Length = 1080
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 74/105 (70%), Gaps = 8/105 (7%)
Query: 48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
LK+P AFH Q + LERA+T + LK KI++RP R+ELVR HIL F +PSL Q
Sbjct: 64 LKSPAAFHEQIKSLERARTENFLKHKIRSRPDRSELVRMHIL----EETFAEPSLQATQM 119
Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVI 152
+L + RLAD LN+++A RPGP+EL++KNIL P++ +VKE +I
Sbjct: 120 KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVDSSVKEAII 160
>sp|Q8AYC2|MRTFA_XENLA Myocardin-related transcription factor A OS=Xenopus laevis GN=mrtfa
PE=2 SV=1
Length = 936
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 87/139 (62%), Gaps = 19/139 (13%)
Query: 48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
LK+P AFH QRR LERA+T D LK KI++RP R ELVR HIL +PSL KQ
Sbjct: 39 LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERAELVRMHILEETSA----EPSLQAKQI 94
Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
+L + RLAD LN++++ RPGP+EL+ KNIL P+E ++KE +I PE
Sbjct: 95 KLKRARLADDLNEKISQRPGPMELVVKNIL----PVETSLKEVIIDV--------DYPEV 142
Query: 168 PDHYMTLDDDSRSSEATSP 186
D+ + D+D SS+A SP
Sbjct: 143 VDNS-SFDED--SSDALSP 158
>sp|Q7YR76|MYCD_PIG Myocardin OS=Sus scrofa GN=MYOCD PE=2 SV=1
Length = 933
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 8/104 (7%)
Query: 48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
L++PPAFH QRR+LE K D LK K++ R R +V+ HIL + + Q
Sbjct: 42 LRSPPAFHEQRRRLESDKAADTLKHKVRNRSDRGNVVKMHILQASS----AERPVPAAQM 97
Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGV 151
+L + RLAD LN+++A RPGPLEL++KNIL P++ AVKE +
Sbjct: 98 KLKRARLADDLNEKIALRPGPLELVEKNIL----PVDCAVKEAI 137
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 1 LKTPPAFHAQRRQLERAKTGDLLKAFSK------KLVSLKRLSAPRIPSSEKTLKTPPAF 54
L++PPAFH QRR+LE K D LK + +V + L A S+E+ +
Sbjct: 42 LRSPPAFHEQRRRLESDKAADTLKHKVRNRSDRGNVVKMHILQA---SSAERPVP----- 93
Query: 55 HAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGV 95
A + +L+RA+ D L KI RP ELV ++IL D V
Sbjct: 94 -AAQMKLKRARLADDLNEKIALRPGPLELVEKNILPVDCAV 133
>sp|Q8R5I7|MYCD_RAT Myocardin OS=Rattus norvegicus GN=Myocd PE=1 SV=2
Length = 938
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 8/104 (7%)
Query: 48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
LK+P FH R++L+ AKT D L+ K++ R R LV HIL + S+ Q
Sbjct: 42 LKSPTEFHDPRKKLDSAKTEDSLRRKVRNRSDRASLVNMHILQASTA----ERSIPTAQM 97
Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGV 151
+L + RLAD LN+++A RPGPLEL++KNIL P++ +VKE +
Sbjct: 98 KLKRARLADDLNEKIALRPGPLELVEKNIL----PMDSSVKEAI 137
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 15/101 (14%)
Query: 1 LKTPPAFHAQRRQLERAKTGDLL------KAFSKKLVSLKRLSAPRIPSSEKTLKTPPAF 54
LK+P FH R++L+ AKT D L ++ LV++ L A ++E+++ T
Sbjct: 42 LKSPTEFHDPRKKLDSAKTEDSLRRKVRNRSDRASLVNMHILQA---STAERSIPT---- 94
Query: 55 HAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGV 95
AQ + L+RA+ D L KI RP ELV ++IL D V
Sbjct: 95 -AQMK-LKRARLADDLNEKIALRPGPLELVEKNILPMDSSV 133
>sp|Q8IZQ8|MYCD_HUMAN Myocardin OS=Homo sapiens GN=MYOCD PE=1 SV=1
Length = 938
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
LK P FH QR+ L+ K + LK K + R +LV HIL + S+ Q
Sbjct: 42 LKRPAEFHEQRKHLDSDKAKNSLKRKARNRCNSADLVNMHILQASTA----ERSIPTAQM 97
Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
+L + RLAD LN+++A RPGPLEL++KNIL + ++ A+K ++F + +
Sbjct: 98 KLKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDA------- 150
Query: 168 PDHYMTLDDDSRSSEATSPPSLSGEAGGVRASSPP 202
++DS SS+ SP E A SPP
Sbjct: 151 ----FAFEEDS-SSDGLSPDQTRSEDPQNSAGSPP 180
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 1 LKTPPAFHAQRRQLERAKTGDLLK------AFSKKLVSLKRLSAPRIPSSEKTLKTPPAF 54
LK P FH QR+ L+ K + LK S LV++ L A ++E+++ T
Sbjct: 42 LKRPAEFHEQRKHLDSDKAKNSLKRKARNRCNSADLVNMHILQA---STAERSIPT---- 94
Query: 55 HAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGV 95
AQ + L+RA+ D L KI RP ELV ++IL D V
Sbjct: 95 -AQMK-LKRARLADDLNEKIALRPGPLELVEKNILPVDSAV 133
>sp|Q8VIM5|MYCD_MOUSE Myocardin OS=Mus musculus GN=Myocd PE=1 SV=2
Length = 935
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 8/104 (7%)
Query: 48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
LK P FH R+QL+ AKT D L+ K + R R LV HIL + S+ Q
Sbjct: 42 LKGPTEFHDPRKQLDSAKTEDSLRRKGRNRSDRASLVTMHILQAST----AERSIPTAQM 97
Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGV 151
+L + RLAD LN+++A RPGPLEL++KNIL P++ +VKE +
Sbjct: 98 KLKRARLADDLNEKIALRPGPLELVEKNIL----PMDSSVKEAI 137
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 1 LKTPPAFHAQRRQLERAKTGDLLKAFSKK------LVSLKRLSAPRIPSSEKTLKTPPAF 54
LK P FH R+QL+ AKT D L+ + LV++ L A ++E+++ T
Sbjct: 42 LKGPTEFHDPRKQLDSAKTEDSLRRKGRNRSDRASLVTMHILQA---STAERSIPT---- 94
Query: 55 HAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGV 95
AQ + L+RA+ D L KI RP ELV ++IL D V
Sbjct: 95 -AQMK-LKRARLADDLNEKIALRPGPLELVEKNILPMDSSV 133
>sp|B2IKQ2|PYRG_BEII9 CTP synthase OS=Beijerinckia indica subsp. indica (strain ATCC 9039
/ DSM 1715 / NCIB 8712) GN=pyrG PE=3 SV=1
Length = 542
Score = 34.3 bits (77), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 57 QRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFV 98
R + + + GD L A +Q P T +++ IL G+EG+ FV
Sbjct: 95 YRDIIAKERRGDYLGATVQVVPHVTNAIKEFILTGNEGLDFV 136
>sp|Q68J42|LIPS_PIG Hormone-sensitive lipase OS=Sus scrofa GN=LIPE PE=2 SV=1
Length = 764
Score = 33.9 bits (76), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 21/121 (17%)
Query: 90 LGDEGVGFVDPSLAEKQRRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKE 149
LG G+ D +L + RL + + H+ P N++ TEEP+ R+V E
Sbjct: 502 LGMMGLVRRDTALLFRDLRLGASSWLNSFLELSGHKSRP------NLVPTEEPMRRSVSE 555
Query: 150 GVIAFRATCEGQSSRPEPPD-----HYMTLDDDSRSSEATSPPSLSGEAGGVRASSPPSL 204
+A +PE P Y+TL D S SSE P LS A + ++P ++
Sbjct: 556 AALA----------QPEGPLGTDSLKYLTLHDLSLSSETQDTPELSLSAETLGPTTPSAV 605
Query: 205 S 205
+
Sbjct: 606 N 606
>sp|A7N0L2|PYRD_VIBHB Dihydroorotate dehydrogenase (quinone) OS=Vibrio harveyi (strain
ATCC BAA-1116 / BB120) GN=pyrD PE=3 SV=1
Length = 336
Score = 33.9 bits (76), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 74 IQARPAR---TELVRQ-HILLGDE----GVGFVDPSLAEKQRRLSKCRLADQLNDQLAHR 125
+ RP + TE+VR+ H LGD+ GVG VD +A K++ ++ +L + H
Sbjct: 266 LSGRPVQSRSTEVVRKLHQELGDKLPIIGVGGVDSYVAAKEKMMAGAQLVQVYTGFIYHG 325
Query: 126 PGPLELIKKNI 136
PG + I KN+
Sbjct: 326 PGLVRDIVKNL 336
>sp|Q87PB7|PYRD_VIBPA Dihydroorotate dehydrogenase (quinone) OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=pyrD PE=3 SV=1
Length = 336
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 74 IQARPAR---TELVRQ-HILLGDE----GVGFVDPSLAEKQRRLSKCRLADQLNDQLAHR 125
+ RP + TE+VR+ H LGD+ GVG +D +A K++ ++ +L + H
Sbjct: 266 LSGRPVQSRSTEVVRKLHEALGDKLPIIGVGGIDSYVAAKEKMMAGAQLVQVYTGFIYHG 325
Query: 126 PGPLELIKKNI 136
PG + I KN+
Sbjct: 326 PGLVRDIVKNL 336
>sp|Q9Z1B3|PLCB1_MOUSE 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1
OS=Mus musculus GN=Plcb1 PE=1 SV=2
Length = 1216
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 180 SSEATSPPSLSGEAGGVRASSPPSLSEERERGGRRASSP 218
S+ ++PPSL+ +A V SP S ERE GR +P
Sbjct: 1177 SNHGSAPPSLASDAAKVNLKSPSSEEIERENPGREFDTP 1215
>sp|P29315|RINI_RAT Ribonuclease inhibitor OS=Rattus norvegicus GN=Rnh1 PE=1 SV=2
Length = 456
Score = 31.6 bits (70), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 70 LKAKIQARPARTELVRQHILLGDEGVGFV-----DPSLAEKQRRLSKCRLAD 116
+++ IQA PA TEL + LGD GVG V +P+ ++ L C L +
Sbjct: 43 IRSAIQANPALTELSLRTNELGDAGVGLVLQGLQNPTCKIQKLSLQNCSLTE 94
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.129 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,428,958
Number of Sequences: 539616
Number of extensions: 3697477
Number of successful extensions: 10103
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 10008
Number of HSP's gapped (non-prelim): 137
length of query: 245
length of database: 191,569,459
effective HSP length: 114
effective length of query: 131
effective length of database: 130,053,235
effective search space: 17036973785
effective search space used: 17036973785
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)