BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14902
(985 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/395 (52%), Positives = 276/395 (69%), Gaps = 7/395 (1%)
Query: 36 HQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYK 95
++FP F++G STA++Q+EG WNEDGKGENIWD LVHT P+++KD N D+ACDSYHKYK
Sbjct: 3 YKFPKDFMFGTSTASYQIEGGWNEDGKGENIWDRLVHTSPEVIKDGTNGDIACDSYHKYK 62
Query: 96 EDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNH 155
EDVA+I+D+ + YRFS+SW+RI P+G + + KG+ YY NLINE++ +I P+VT+ H
Sbjct: 63 EDVAIIKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYH 122
Query: 156 YDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGAP 215
+DLPQ LQ+ GGW NP+++DYF+ +A V F FGD+V +WIT NEP+ V GY K+ AP
Sbjct: 123 WDLPQYLQDLGGWVNPIMSDYFKEYARVLFTYFGDRVKWWITFNEPIAVCKGYSIKAYAP 182
Query: 216 YLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQ 275
LNL G YL H L AH KAYRLYE+ +K Q GK+SI++ + P NA S +D
Sbjct: 183 NLNLK-TTGHYLAGHTQLIAHGKAYRLYEEMFKPTQNGKISISISGVFFMPKNAESDDDI 241
Query: 276 EAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 335
E AER QF G F HP+Y GDYPPI+++ VDQ S +EG S+LP+FT++EIK LKG
Sbjct: 242 ETAERANQFERGWFGHPVYK--GDYPPIMKKWVDQKSKEEGLPWSKLPKFTKDEIKLLKG 299
Query: 336 SFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSN-SPWLKVVPDGFRA 394
+ DF+ALNHY+S L+ S+ P+ D + S D W N +P++ VP+G R
Sbjct: 300 TADFYALNHYSSRLVT---FGSDPNPNFNPDASYVTSVDEAWLKPNETPYIIPVPEGLRK 356
Query: 395 LLNWIKKEYNNPPVFITENGFSDDGRLDDEGRIDY 429
LL W+K EY NP + ITENG+ DDG+LDD +I Y
Sbjct: 357 LLIWLKNEYGNPQLLITENGYGDDGQLDDFEKISY 391
Score = 247 bits (630), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/278 (46%), Positives = 170/278 (61%), Gaps = 44/278 (15%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKGENIWDRLVHT+P + D NGD+ACDSYHKYKEDVAIIKDL + YRFS+SW+RI P
Sbjct: 28 GKGENIWDRLVHTSPEVIKDGTNGDIACDSYHKYKEDVAIIKDLNLKFYRFSISWARIAP 87
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPMV----------------------------- 777
+G ++ + KG+ YY NLI+EL+ N+I P+V
Sbjct: 88 SGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWDLPQYLQDLGGWVNPIMSDYFKEY 147
Query: 778 ------------KLWITIKETLEAMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHAKAY 825
K WIT E + +GY K YAP L++ G YLA H L +H KAY
Sbjct: 148 ARVLFTYFGDRVKWWITFNEPIAVCKGYSIKAYAPNLNLKTTG-HYLAGHTQLIAHGKAY 206
Query: 826 RLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGDY 885
RLYE+ +KP+Q GK++++++ F P + S +D E AER QF+ G F HP+Y GDY
Sbjct: 207 RLYEEMFKPTQNGKISISISGVFFMPKNAESDDDIETAERANQFERGWFGHPVYK--GDY 264
Query: 886 PPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTE 923
PPI+++ VDQ S +EG S+LP+FT++EIK LKG +
Sbjct: 265 PPIMKKWVDQKSKEEGLPWSKLPKFTKDEIKLLKGTAD 302
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 65/86 (75%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDF 491
+ YRFS+SW+RI P+G ++ + KG+ YY NLI+EL+ N+I P+VT+YHWDLPQ LQD
Sbjct: 73 LKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWDLPQYLQDL 132
Query: 492 GGWTNAIIADYFETYADFAYKTFGDK 517
GGW N I++DYF+ YA + FGD+
Sbjct: 133 GGWVNPIMSDYFKEYARVLFTYFGDR 158
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 568 DYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPK-GASFWLKVVPDGFRALLN 626
D++ LNHY+S LV+ ++P+P +F DA+ V S D W K + ++ VP+G R LL
Sbjct: 302 DFYALNHYSSRLVTFGSDPNP--NFNPDASYVTSVDEAWLKPNETPYIIPVPEGLRKLLI 359
Query: 627 WIKKEYNNPPVFITENGFSDDGQLDDQGRVDF 658
W+K EY NP + ITENG+ DDGQLDD ++ +
Sbjct: 360 WLKNEYGNPQLLITENGYGDDGQLDDFEKISY 391
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFS 564
K YL A +A+ DKCN+IGYT WS+LDNFEW GY+ FG+V +DF+
Sbjct: 393 KNYLNATLQAMYEDKCNVIGYTVWSLLDNFEWFYGYSIHFGLVKIDFN 440
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 951 YLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
YL A +A+ EDKCNVIGYT WSLLDNFEW GY+
Sbjct: 395 YLNATLQAMYEDKCNVIGYTVWSLLDNFEWFYGYS 429
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With 1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/397 (51%), Positives = 273/397 (68%), Gaps = 5/397 (1%)
Query: 36 HQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYK 95
+ FP F G +TA++Q+EGAW+E+GKG NIWD L H PD V D D+A DSYH YK
Sbjct: 10 YTFPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYK 69
Query: 96 EDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNH 155
EDV +++++G QVYRFS+SW+R+LP G + +N+ G+ YY NLINE+L+ I+PMVT+ H
Sbjct: 70 EDVKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYH 129
Query: 156 YDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSG-A 214
+DLPQ LQ+ GGW N V+A Y E++A V FK FGD+V W+T NEPL M GY + G A
Sbjct: 130 WDLPQALQDLGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNEPLTFMDGYASEIGMA 189
Query: 215 PYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKED 274
P +N G+ GDYL AH ++ AHA+ Y LY++++++ Q GKV I+L+ N+ S ED
Sbjct: 190 PSINTPGI-GDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLN-INWCEPATNSAED 247
Query: 275 QEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALK 334
+ + E QF LGL+AHPI++E GDYP +++ V +NSA EG SRLP+FT EE++ ++
Sbjct: 248 RASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIR 307
Query: 335 GSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRA 394
G+ DF +N YT++L + PS D +QD WP S S WLKVVP GFR
Sbjct: 308 GTHDFLGINFYTALL--GKSGVEGYEPSRYRDSGVILTQDAAWPISASSWLKVVPWGFRK 365
Query: 395 LLNWIKKEYNNPPVFITENGFSDDGRLDDEGRIDYYA 431
LNWIK EYNNPPVFITENGFSD G L+D GR+ YY
Sbjct: 366 ELNWIKNEYNNPPVFITENGFSDYGGLNDTGRVHYYT 402
Score = 226 bits (576), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 118/277 (42%), Positives = 167/277 (60%), Gaps = 44/277 (15%)
Query: 686 SGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRIL 745
+GKG NIWD L H +P VVD GD+A DSYH YKEDV I+K+LG QVYRFS+SW+R+L
Sbjct: 34 NGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVL 93
Query: 746 PTGDIDKINEKGVQYYRNLIDELLLNNIQPMV---------------------------- 777
P G + +N+ G+ YY NLI+ELL N I+PMV
Sbjct: 94 PEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQALQDLGGWPNLVLAKYSEN 153
Query: 778 -------------KLWITIKETLEAMQGYDFKT-YAPYLSMTGVGGEYLAAHNLLRSHAK 823
KLW+T E L M GY + AP ++ G+G +YLAAH ++ +HA+
Sbjct: 154 YARVLFKNFGDRVKLWLTFNEPLTFMDGYASEIGMAPSINTPGIG-DYLAAHTVIHAHAR 212
Query: 824 AYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAG 883
Y LY+++++ Q GKV ++LN ++ P +S ED+ + E Y QF GL+AHPI+++ G
Sbjct: 213 IYHLYDQEFRAEQGGKVGISLNINWCEPA-TNSAEDRASCENYQQFNLGLYAHPIFTEEG 271
Query: 884 DYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 920
DYP +++ V +NSA EG SRLP+FT EE++ ++G
Sbjct: 272 DYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRG 308
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 66/88 (75%)
Query: 433 QVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDFG 492
QVYRFS+SW+R+LP G + +N+ G+ YY NLI+ELL N I+PMVT+YHWDLPQ LQD G
Sbjct: 81 QVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQALQDLG 140
Query: 493 GWTNAIIADYFETYADFAYKTFGDKKYL 520
GW N ++A Y E YA +K FGD+ L
Sbjct: 141 GWPNLVLAKYSENYARVLFKNFGDRVKL 168
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRALL 625
+ D+ G+N YT+ L E EPS D+ V+L+ D WP AS WLKVVP GFR L
Sbjct: 309 THDFLGINFYTALLGKSGVE-GYEPSRYRDSGVILTQDAAWPISASSWLKVVPWGFRKEL 367
Query: 626 NWIKKEYNNPPVFITENGFSDDGQLDDQGRVDFY 659
NWIK EYNNPPVFITENGFSD G L+D GRV +Y
Sbjct: 368 NWIKNEYNNPPVFITENGFSDYGGLNDTGRVHYY 401
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 518 KYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDF 563
++L M KA+ D N+IGYTAWS++DNFEWL GY+ +FGI VDF
Sbjct: 403 EHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDF 448
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 950 KYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++L + KAI ED NVIGYTAWSL+DNFEWL GY+
Sbjct: 403 EHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYS 438
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/397 (51%), Positives = 273/397 (68%), Gaps = 5/397 (1%)
Query: 36 HQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYK 95
+ FP F G +TA++Q+EGAW+E+GKG NIWD L H PD V D D+A DSYH YK
Sbjct: 10 YTFPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYK 69
Query: 96 EDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNH 155
EDV +++++G QVYRFS+SW+R+LP G + +N+ G+ YY NLINE+L+ I+PMVT+ H
Sbjct: 70 EDVKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYH 129
Query: 156 YDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSG-A 214
+DLPQ LQ+ GGW N V+A Y E++A V FK FGD+V W+T N+PL M GY + G A
Sbjct: 130 WDLPQALQDLGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNDPLTFMDGYASEIGMA 189
Query: 215 PYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKED 274
P +N G+ GDYL AH ++ AHA+ Y LY++++++ Q GKV I+L+ N+ S ED
Sbjct: 190 PSINTPGI-GDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLN-INWCEPATNSAED 247
Query: 275 QEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALK 334
+ + E QF LGL+AHPI++E GDYP +++ V +NSA EG SRLP+FT EE++ ++
Sbjct: 248 RASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIR 307
Query: 335 GSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRA 394
G+ DF +N YT++L + PS D +QD WP S S WLKVVP GFR
Sbjct: 308 GTHDFLGINFYTALL--GKSGVEGYEPSRYRDSGVILTQDAAWPISASSWLKVVPWGFRK 365
Query: 395 LLNWIKKEYNNPPVFITENGFSDDGRLDDEGRIDYYA 431
LNWIK EYNNPPVFITENGFSD G L+D GR+ YY
Sbjct: 366 ELNWIKNEYNNPPVFITENGFSDYGGLNDTGRVHYYT 402
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 167/277 (60%), Gaps = 44/277 (15%)
Query: 686 SGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRIL 745
+GKG NIWD L H +P VVD GD+A DSYH YKEDV I+K+LG QVYRFS+SW+R+L
Sbjct: 34 NGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVL 93
Query: 746 PTGDIDKINEKGVQYYRNLIDELLLNNIQPMV---------------------------- 777
P G + +N+ G+ YY NLI+ELL N I+PMV
Sbjct: 94 PEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQALQDLGGWPNLVLAKYSEN 153
Query: 778 -------------KLWITIKETLEAMQGYDFKT-YAPYLSMTGVGGEYLAAHNLLRSHAK 823
KLW+T + L M GY + AP ++ G+G +YLAAH ++ +HA+
Sbjct: 154 YARVLFKNFGDRVKLWLTFNDPLTFMDGYASEIGMAPSINTPGIG-DYLAAHTVIHAHAR 212
Query: 824 AYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAG 883
Y LY+++++ Q GKV ++LN ++ P +S ED+ + E Y QF GL+AHPI+++ G
Sbjct: 213 IYHLYDQEFRAEQGGKVGISLNINWCEPA-TNSAEDRASCENYQQFNLGLYAHPIFTEEG 271
Query: 884 DYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 920
DYP +++ V +NSA EG SRLP+FT EE++ ++G
Sbjct: 272 DYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRG 308
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 66/88 (75%)
Query: 433 QVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDFG 492
QVYRFS+SW+R+LP G + +N+ G+ YY NLI+ELL N I+PMVT+YHWDLPQ LQD G
Sbjct: 81 QVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQALQDLG 140
Query: 493 GWTNAIIADYFETYADFAYKTFGDKKYL 520
GW N ++A Y E YA +K FGD+ L
Sbjct: 141 GWPNLVLAKYSENYARVLFKNFGDRVKL 168
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRALL 625
+ D+ G+N YT+ L E EPS D+ V+L+ D WP AS WLKVVP GFR L
Sbjct: 309 THDFLGINFYTALLGKSGVE-GYEPSRYRDSGVILTQDAAWPISASSWLKVVPWGFRKEL 367
Query: 626 NWIKKEYNNPPVFITENGFSDDGQLDDQGRVDFY 659
NWIK EYNNPPVFITENGFSD G L+D GRV +Y
Sbjct: 368 NWIKNEYNNPPVFITENGFSDYGGLNDTGRVHYY 401
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 518 KYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDF 563
++L M KA+ D N+IGYTAWS++DNFEWL GY+ +FGI VDF
Sbjct: 403 EHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDF 448
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 950 KYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++L + KAI ED NVIGYTAWSL+DNFEWL GY+
Sbjct: 403 EHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYS 438
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/397 (51%), Positives = 272/397 (68%), Gaps = 5/397 (1%)
Query: 36 HQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYK 95
+ FP F G +TA++Q+EGAW+E+GKG NIWD L H PD V D D+A DSYH YK
Sbjct: 10 YTFPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYK 69
Query: 96 EDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNH 155
EDV +++++G QVYRFS+SW+R+LP G + +N+ G+ YY NLINE+L+ I+PMVT+ H
Sbjct: 70 EDVKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYH 129
Query: 156 YDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSG-A 214
+DLPQ LQ+ GGW N V+A Y E++A V FK FGD+V W+T N PL M GY + G A
Sbjct: 130 WDLPQALQDLGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNSPLTFMDGYASEIGMA 189
Query: 215 PYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKED 274
P +N G+ GDYL AH ++ AHA+ Y LY++++++ Q GKV I+L+ N+ S ED
Sbjct: 190 PSINTPGI-GDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLN-INWCEPATNSAED 247
Query: 275 QEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALK 334
+ + E QF LGL+AHPI++E GDYP +++ V +NSA EG SRLP+FT EE++ ++
Sbjct: 248 RASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIR 307
Query: 335 GSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRA 394
G+ DF +N YT++L + PS D +QD WP S S WLKVVP GFR
Sbjct: 308 GTHDFLGINFYTALL--GKSGVEGYEPSRYRDSGVILTQDAAWPISASSWLKVVPWGFRK 365
Query: 395 LLNWIKKEYNNPPVFITENGFSDDGRLDDEGRIDYYA 431
LNWIK EYNNPPVFITENGFSD G L+D GR+ YY
Sbjct: 366 ELNWIKNEYNNPPVFITENGFSDYGGLNDTGRVHYYT 402
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 166/277 (59%), Gaps = 44/277 (15%)
Query: 686 SGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRIL 745
+GKG NIWD L H +P VVD GD+A DSYH YKEDV I+K+LG QVYRFS+SW+R+L
Sbjct: 34 NGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVL 93
Query: 746 PTGDIDKINEKGVQYYRNLIDELLLNNIQPMV---------------------------- 777
P G + +N+ G+ YY NLI+ELL N I+PMV
Sbjct: 94 PEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQALQDLGGWPNLVLAKYSEN 153
Query: 778 -------------KLWITIKETLEAMQGYDFKT-YAPYLSMTGVGGEYLAAHNLLRSHAK 823
KLW+T L M GY + AP ++ G+G +YLAAH ++ +HA+
Sbjct: 154 YARVLFKNFGDRVKLWLTFNSPLTFMDGYASEIGMAPSINTPGIG-DYLAAHTVIHAHAR 212
Query: 824 AYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAG 883
Y LY+++++ Q GKV ++LN ++ P +S ED+ + E Y QF GL+AHPI+++ G
Sbjct: 213 IYHLYDQEFRAEQGGKVGISLNINWCEPA-TNSAEDRASCENYQQFNLGLYAHPIFTEEG 271
Query: 884 DYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 920
DYP +++ V +NSA EG SRLP+FT EE++ ++G
Sbjct: 272 DYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRG 308
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 66/88 (75%)
Query: 433 QVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDFG 492
QVYRFS+SW+R+LP G + +N+ G+ YY NLI+ELL N I+PMVT+YHWDLPQ LQD G
Sbjct: 81 QVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQALQDLG 140
Query: 493 GWTNAIIADYFETYADFAYKTFGDKKYL 520
GW N ++A Y E YA +K FGD+ L
Sbjct: 141 GWPNLVLAKYSENYARVLFKNFGDRVKL 168
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRALL 625
+ D+ G+N YT+ L E EPS D+ V+L+ D WP AS WLKVVP GFR L
Sbjct: 309 THDFLGINFYTALLGKSGVE-GYEPSRYRDSGVILTQDAAWPISASSWLKVVPWGFRKEL 367
Query: 626 NWIKKEYNNPPVFITENGFSDDGQLDDQGRVDFY 659
NWIK EYNNPPVFITENGFSD G L+D GRV +Y
Sbjct: 368 NWIKNEYNNPPVFITENGFSDYGGLNDTGRVHYY 401
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 518 KYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDF 563
++L M KA+ D N+IGYTAWS++DNFEWL GY+ +FGI VDF
Sbjct: 403 EHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDF 448
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 950 KYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++L + KAI ED NVIGYTAWSL+DNFEWL GY+
Sbjct: 403 EHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYS 438
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 421 bits (1083), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/397 (51%), Positives = 272/397 (68%), Gaps = 5/397 (1%)
Query: 36 HQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYK 95
+ FP F G +TA++Q+EGAW+E+GKG NIWD L H PD V D D+A DSYH YK
Sbjct: 10 YTFPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYK 69
Query: 96 EDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNH 155
EDV +++++G QVYRFS+SW+R+LP G + +N+ G+ YY NLINE+L+ I+PMVT+ H
Sbjct: 70 EDVKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYH 129
Query: 156 YDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSG-A 214
+DLPQ LQ+ GGW N V+A Y E++A V FK FGD+V W+T N PL M GY + G A
Sbjct: 130 WDLPQALQDLGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNAPLTFMDGYASEIGMA 189
Query: 215 PYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKED 274
P +N G+ GDYL AH ++ AHA+ Y LY++++++ Q GKV I+L+ N+ S ED
Sbjct: 190 PSINTPGI-GDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLN-INWCEPATNSAED 247
Query: 275 QEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALK 334
+ + E QF LGL+AHPI++E GDYP +++ V +NSA EG SRLP+FT EE++ ++
Sbjct: 248 RASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIR 307
Query: 335 GSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRA 394
G+ DF +N YT++L + PS D +QD WP S S WLKVVP GFR
Sbjct: 308 GTHDFLGINFYTALL--GKSGVEGYEPSRYRDSGVILTQDAAWPISASSWLKVVPWGFRK 365
Query: 395 LLNWIKKEYNNPPVFITENGFSDDGRLDDEGRIDYYA 431
LNWIK EYNNPPVFITENGFSD G L+D GR+ YY
Sbjct: 366 ELNWIKNEYNNPPVFITENGFSDYGGLNDTGRVHYYT 402
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 166/277 (59%), Gaps = 44/277 (15%)
Query: 686 SGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRIL 745
+GKG NIWD L H +P VVD GD+A DSYH YKEDV I+K+LG QVYRFS+SW+R+L
Sbjct: 34 NGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVL 93
Query: 746 PTGDIDKINEKGVQYYRNLIDELLLNNIQPMV---------------------------- 777
P G + +N+ G+ YY NLI+ELL N I+PMV
Sbjct: 94 PEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQALQDLGGWPNLVLAKYSEN 153
Query: 778 -------------KLWITIKETLEAMQGYDFKT-YAPYLSMTGVGGEYLAAHNLLRSHAK 823
KLW+T L M GY + AP ++ G+G +YLAAH ++ +HA+
Sbjct: 154 YARVLFKNFGDRVKLWLTFNAPLTFMDGYASEIGMAPSINTPGIG-DYLAAHTVIHAHAR 212
Query: 824 AYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAG 883
Y LY+++++ Q GKV ++LN ++ P +S ED+ + E Y QF GL+AHPI+++ G
Sbjct: 213 IYHLYDQEFRAEQGGKVGISLNINWCEPA-TNSAEDRASCENYQQFNLGLYAHPIFTEEG 271
Query: 884 DYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 920
DYP +++ V +NSA EG SRLP+FT EE++ ++G
Sbjct: 272 DYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRG 308
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 66/88 (75%)
Query: 433 QVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDFG 492
QVYRFS+SW+R+LP G + +N+ G+ YY NLI+ELL N I+PMVT+YHWDLPQ LQD G
Sbjct: 81 QVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQALQDLG 140
Query: 493 GWTNAIIADYFETYADFAYKTFGDKKYL 520
GW N ++A Y E YA +K FGD+ L
Sbjct: 141 GWPNLVLAKYSENYARVLFKNFGDRVKL 168
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRALL 625
+ D+ G+N YT+ L E EPS D+ V+L+ D WP AS WLKVVP GFR L
Sbjct: 309 THDFLGINFYTALLGKSGVE-GYEPSRYRDSGVILTQDAAWPISASSWLKVVPWGFRKEL 367
Query: 626 NWIKKEYNNPPVFITENGFSDDGQLDDQGRVDFY 659
NWIK EYNNPPVFITENGFSD G L+D GRV +Y
Sbjct: 368 NWIKNEYNNPPVFITENGFSDYGGLNDTGRVHYY 401
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 518 KYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDF 563
++L M KA+ D N+IGYTAWS++DNFEWL GY+ +FGI VDF
Sbjct: 403 EHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDF 448
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 950 KYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++L + KAI ED NVIGYTAWSL+DNFEWL GY+
Sbjct: 403 EHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYS 438
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 332 bits (851), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 191/465 (41%), Positives = 265/465 (56%), Gaps = 19/465 (4%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
FP GF W +TAA+QVEG W+ DGKG +WD H + V Q DVAC SY ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYD 157
+ I+ +G YRFSLSWSR+LP G T IN+KG+ YY +I+++L + P+VTL H+D
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 158 LPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGA--P 215
LPQ L++ GGW + + + F+ +A F TFGD+V WITINE +V+ Y G P
Sbjct: 123 LPQTLEDQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEA-NVLSVMSYDLGMFPP 181
Query: 216 YLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQ 275
+ G GG Y AHNL++AHA+++ Y+ ++ QKG VS++L + P + S DQ
Sbjct: 182 GIPHFGTGG-YQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQ 240
Query: 276 EAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 335
EAA+R F L LFA PI+ + GDYP +V+ + S K+G SRLP FTEEE K +KG
Sbjct: 241 EAAKRAITFHLDLFAKPIFID-GDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKG 299
Query: 336 SFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRAL 395
+ DFFA+ +YT+ LI + D F DP+W N W+ VVP G L
Sbjct: 300 TADFFAVQYYTTRLI-KYQENKKGELGILQDAEIEFFPDPSW--KNVDWIYVVPWGVCKL 356
Query: 396 LNWIKKEYNNPPVFITENGF--SDDGRLDDEGRIDYYAFQVYRFSLSWSRILPTGDIDKI 453
L +IK YNNP ++ITENGF SD LDD R +Y F ++ + +DK+
Sbjct: 357 LKYIKDTYNNPVIYITENGFPQSDPAPLDDTQRWEY-------FRQTFQELFKAIQLDKV 409
Query: 454 NEKGVQYYRNLIDELLLNN-IQPMVTLYHWDLPQPLQDFGGWTNA 497
N + V +L+D N L+H D P + +T+A
Sbjct: 410 NLQ-VYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSA 453
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 151/296 (51%), Gaps = 44/296 (14%)
Query: 670 WFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKD 729
W + V + GKG +WD H V Q GDVAC SY ++ED+ IK
Sbjct: 9 WAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEEDLKCIKQ 68
Query: 730 LGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL---------- 779
LG YRFSLSWSR+LP G IN+KG+ YY +ID+LL N + P+V L
Sbjct: 69 LGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLE 128
Query: 780 -------------------------------WITIKET-LEAMQGYDFKTYAPYLSMTGV 807
WITI E + ++ YD + P + G
Sbjct: 129 DQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPGIPHFGT 188
Query: 808 GGEYLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYI 867
GG Y AAHNL+++HA+++ Y+ ++ QKG V+L+L + P DP+S DQEAA+R I
Sbjct: 189 GG-YQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAI 247
Query: 868 QFKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTE 923
F LFA PI+ GDYP +V+ + S K+G SRLP FTEEE K +KG +
Sbjct: 248 TFHLDLFAKPIFID-GDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTAD 302
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 61/83 (73%)
Query: 435 YRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDFGGW 494
YRFSLSWSR+LP G IN+KG+ YY +ID+LL N + P+VTLYH+DLPQ L+D GGW
Sbjct: 74 YRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQGGW 133
Query: 495 TNAIIADYFETYADFAYKTFGDK 517
+ I + F+ YA F + TFGD+
Sbjct: 134 LSEAIIESFDKYAQFCFSTFGDR 156
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 568 DYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRALLNW 627
D+F + +YT+ L+ + E DA + D W W+ VVP G LL +
Sbjct: 302 DFFAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSWKNVD--WIYVVPWGVCKLLKY 359
Query: 628 IKKEYNNPPVFITENGF--SDDGQLDDQGRVDFYQ 660
IK YNNP ++ITENGF SD LDD R ++++
Sbjct: 360 IKDTYNNPVIYITENGFPQSDPAPLDDTQRWEYFR 394
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 955 LSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
L KAI DK N+ Y AWSLLDNFEW GY+
Sbjct: 400 LFKAIQLDKVNLQVYCAWSLLDNFEWNQGYS 430
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 331 bits (849), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/465 (41%), Positives = 265/465 (56%), Gaps = 19/465 (4%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
FP GF W +TAA+QVEG W+ DGKG +WD H + V Q DVAC SY ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYD 157
+ I+ +G YRFSLSWSR+LP G T IN+KG+ YY +I+++L + P+VTL H+D
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 158 LPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGA--P 215
LPQ L++ GGW + + + F+ +A F TFGD+V WITINE +V+ Y G P
Sbjct: 123 LPQTLEDQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEA-NVLSVMSYDLGMFPP 181
Query: 216 YLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQ 275
+ G GG Y AHNL++AHA+++ Y+ ++ QKG VS++L + P + S DQ
Sbjct: 182 GIPHFGTGG-YQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQ 240
Query: 276 EAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 335
EAA+R F L LFA PI+ + GDYP +V+ + S K+G SRLP FTEEE K +KG
Sbjct: 241 EAAKRAITFHLDLFAKPIFID-GDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKG 299
Query: 336 SFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRAL 395
+ DFFA+ +YT+ LI + D F DP+W N W+ VVP G L
Sbjct: 300 TADFFAVQYYTTRLI-KYQENKKGELGILQDAEIEFFPDPSW--INVDWIYVVPWGVCKL 356
Query: 396 LNWIKKEYNNPPVFITENGF--SDDGRLDDEGRIDYYAFQVYRFSLSWSRILPTGDIDKI 453
L +IK YNNP ++ITENGF SD LDD R +Y F ++ + +DK+
Sbjct: 357 LKYIKDTYNNPVIYITENGFPQSDPAPLDDTQRWEY-------FRQTFQELFKAIQLDKV 409
Query: 454 NEKGVQYYRNLIDELLLNN-IQPMVTLYHWDLPQPLQDFGGWTNA 497
N + V +L+D N L+H D P + +T+A
Sbjct: 410 NLQ-VYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSA 453
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 151/296 (51%), Gaps = 44/296 (14%)
Query: 670 WFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKD 729
W + V + GKG +WD H V Q GDVAC SY ++ED+ IK
Sbjct: 9 WAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEEDLKCIKQ 68
Query: 730 LGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL---------- 779
LG YRFSLSWSR+LP G IN+KG+ YY +ID+LL N + P+V L
Sbjct: 69 LGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLE 128
Query: 780 -------------------------------WITIKET-LEAMQGYDFKTYAPYLSMTGV 807
WITI E + ++ YD + P + G
Sbjct: 129 DQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPGIPHFGT 188
Query: 808 GGEYLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYI 867
GG Y AAHNL+++HA+++ Y+ ++ QKG V+L+L + P DP+S DQEAA+R I
Sbjct: 189 GG-YQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAI 247
Query: 868 QFKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTE 923
F LFA PI+ GDYP +V+ + S K+G SRLP FTEEE K +KG +
Sbjct: 248 TFHLDLFAKPIFID-GDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTAD 302
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 61/83 (73%)
Query: 435 YRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDFGGW 494
YRFSLSWSR+LP G IN+KG+ YY +ID+LL N + P+VTLYH+DLPQ L+D GGW
Sbjct: 74 YRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQGGW 133
Query: 495 TNAIIADYFETYADFAYKTFGDK 517
+ I + F+ YA F + TFGD+
Sbjct: 134 LSEAIIESFDKYAQFCFSTFGDR 156
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 568 DYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRALLNW 627
D+F + +YT+ L+ + E DA + D W W+ VVP G LL +
Sbjct: 302 DFFAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSWINVD--WIYVVPWGVCKLLKY 359
Query: 628 IKKEYNNPPVFITENGF--SDDGQLDDQGRVDFYQ 660
IK YNNP ++ITENGF SD LDD R ++++
Sbjct: 360 IKDTYNNPVIYITENGFPQSDPAPLDDTQRWEYFR 394
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 955 LSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
L KAI DK N+ Y AWSLLDNFEW GY+
Sbjct: 400 LFKAIQLDKVNLQVYCAWSLLDNFEWNQGYS 430
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 190/465 (40%), Positives = 265/465 (56%), Gaps = 19/465 (4%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
FP GF W +TAA+QVEG W+ DGKG +WD H + V Q DVAC SY ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYD 157
+ I+ +G YRFSLSWSR+LP G T IN+KG+ YY +I+++L + P+VTL H+D
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 158 LPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGA--P 215
LPQ L++ GGW + + + F+ +A F TFGD+V WITIN+ +V+ Y G P
Sbjct: 123 LPQTLEDQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINQA-NVLSVMSYDLGMFPP 181
Query: 216 YLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQ 275
+ G GG Y AHNL++AHA+++ Y+ ++ QKG VS++L + P + S DQ
Sbjct: 182 GIPHFGTGG-YQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQ 240
Query: 276 EAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 335
EAA+R F L LFA PI+ + GDYP +V+ + S K+G SRLP FTEEE K +KG
Sbjct: 241 EAAKRAITFHLDLFAKPIFID-GDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKG 299
Query: 336 SFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRAL 395
+ DFFA+ +YT+ LI + D F DP+W N W+ VVP G L
Sbjct: 300 TADFFAVQYYTTRLI-KYQENKKGELGILQDAEIEFFPDPSW--KNVDWIYVVPWGVCKL 356
Query: 396 LNWIKKEYNNPPVFITENGF--SDDGRLDDEGRIDYYAFQVYRFSLSWSRILPTGDIDKI 453
L +IK YNNP ++ITENGF SD LDD R +Y F ++ + +DK+
Sbjct: 357 LKYIKDTYNNPVIYITENGFPQSDPAPLDDTQRWEY-------FRQTFQELFKAIQLDKV 409
Query: 454 NEKGVQYYRNLIDELLLNN-IQPMVTLYHWDLPQPLQDFGGWTNA 497
N + V +L+D N L+H D P + +T+A
Sbjct: 410 NLQ-VYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSA 453
Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 151/296 (51%), Gaps = 44/296 (14%)
Query: 670 WFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKD 729
W + V + GKG +WD H V Q GDVAC SY ++ED+ IK
Sbjct: 9 WAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEEDLKCIKQ 68
Query: 730 LGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL---------- 779
LG YRFSLSWSR+LP G IN+KG+ YY +ID+LL N + P+V L
Sbjct: 69 LGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLE 128
Query: 780 -------------------------------WITIKET-LEAMQGYDFKTYAPYLSMTGV 807
WITI + + ++ YD + P + G
Sbjct: 129 DQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINQANVLSVMSYDLGMFPPGIPHFGT 188
Query: 808 GGEYLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYI 867
GG Y AAHNL+++HA+++ Y+ ++ QKG V+L+L + P DP+S DQEAA+R I
Sbjct: 189 GG-YQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAI 247
Query: 868 QFKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTE 923
F LFA PI+ GDYP +V+ + S K+G SRLP FTEEE K +KG +
Sbjct: 248 TFHLDLFAKPIFID-GDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTAD 302
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 69/97 (71%), Gaps = 2/97 (2%)
Query: 435 YRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDFGGW 494
YRFSLSWSR+LP G IN+KG+ YY +ID+LL N + P+VTLYH+DLPQ L+D GGW
Sbjct: 74 YRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQGGW 133
Query: 495 TNAIIADYFETYADFAYKTFGD--KKYLTAMQKALVN 529
+ I + F+ YA F + TFGD K+++T Q +++
Sbjct: 134 LSEAIIESFDKYAQFCFSTFGDRVKQWITINQANVLS 170
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 568 DYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRALLNW 627
D+F + +YT+ L+ + E DA + D W W+ VVP G LL +
Sbjct: 302 DFFAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSWKNVD--WIYVVPWGVCKLLKY 359
Query: 628 IKKEYNNPPVFITENGF--SDDGQLDDQGRVDFYQ 660
IK YNNP ++ITENGF SD LDD R ++++
Sbjct: 360 IKDTYNNPVIYITENGFPQSDPAPLDDTQRWEYFR 394
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 955 LSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
L KAI DK N+ Y AWSLLDNFEW GY+
Sbjct: 400 LFKAIQLDKVNLQVYCAWSLLDNFEWNQGYS 430
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/430 (43%), Positives = 253/430 (58%), Gaps = 38/430 (8%)
Query: 31 TQMNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDS 90
+ +N+ F PGF++G +++AFQ EGA EDGKG +IWD H P+ +KDR N DVA D
Sbjct: 12 SDLNRSCFAPGFVFGTASSAFQYEGAAFEDGKGPSIWDTFTHKYPEKIKDRTNGDVAIDE 71
Query: 91 YHKYKEDVALIRDIGFQVYRFSLSWSRILPTGD-TDRINEKGVQYYRNLINEVLSKNIQP 149
YH+YKED+ +++D+ YRFS+SW R+LP G + +N +G+ YY NLINEVL+ +QP
Sbjct: 72 YHRYKEDIGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQP 131
Query: 150 MVTLNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGG 207
VTL H+D+PQ L+ E+ G+ + D F +A++ FK FGD+V +WIT+NEP V M
Sbjct: 132 YVTLFHWDVPQALEDEYRGFLGRNIVDDFRDYAELCFKEFGDRVKHWITLNEPWGVSMNA 191
Query: 208 YGYKSGAP-----YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSI 257
Y Y + AP +L L+ GGD YL AH L AHA A RLY+ KY++ Q G + I
Sbjct: 192 YAYGTFAPGRCSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLYKTKYQASQNGIIGI 251
Query: 258 TLDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGR 317
TL S +++ + K D +AA+R F LG F HP+ G YP +R +V
Sbjct: 252 TLVS-HWFEPASKEKADVDAAKRGLDFMLGWFMHPL--TKGRYPESMRYLV--------- 299
Query: 318 ARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRA--ATFSQD- 374
R RLP+F+ EE K L GSFDF LN+Y+S A NA P+ D ATF +
Sbjct: 300 -RKRLPKFSTEESKELTGSFDFLGLNYYSSYYAAKAPRIPNARPAIQTDSLINATFEHNG 358
Query: 375 -PNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENG--------FSDDGRLDDEG 425
P P + S WL + P G R LL ++K YNNP ++ITENG S L D
Sbjct: 359 KPLGPMAASSWLCIYPQGIRKLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLDTP 418
Query: 426 RIDYYAFQVY 435
RIDYY +Y
Sbjct: 419 RIDYYYRHLY 428
Score = 162 bits (410), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 167/354 (47%), Gaps = 78/354 (22%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKG +IWD H P + D+ NGDVA D YH+YKED+ I+KD+ YRFS+SW R+LP
Sbjct: 42 GKGPSIWDTFTHKYPEKIKDRTNGDVAIDEYHRYKEDIGIMKDMNLDAYRFSISWPRVLP 101
Query: 747 TGDIDK-INEKGVQYYRNLIDELLLNNIQPMVKL-------------------------- 779
G + +N +G+ YY NLI+E+L N +QP V L
Sbjct: 102 KGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHWDVPQALEDEYRGFLGRNIVDDFR 161
Query: 780 ----------------WITIKETLE-AMQGYDFKTYAP-----YLSMTGVGGE-----YL 812
WIT+ E +M Y + T+AP +L + GG+ YL
Sbjct: 162 DYAELCFKEFGDRVKHWITLNEPWGVSMNAYAYGTFAPGRCSDWLKLNCTGGDSGREPYL 221
Query: 813 AAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKE--DQEAAERYIQFK 870
AAH L +HA A RLY+ KY+ SQ G + +TL +H+ +P+SKE D +AA+R + F
Sbjct: 222 AAHYQLLAHAAAARLYKTKYQASQNGIIGITLVSHW---FEPASKEKADVDAAKRGLDFM 278
Query: 871 FGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTEEEINALK 930
G F HP+ G YP +R +V R RLP+F+ EE K L G + L
Sbjct: 279 LGWFMHPL--TKGRYPESMRYLV----------RKRLPKFSTEESKELTGSF--DFLGLN 324
Query: 931 GKQKYLTALSKAIGEDKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGY 984
Y A + I + +L A E +G A S WLC Y
Sbjct: 325 YYSSYYAAKAPRIPNARPAIQTDSLINATFEHNGKPLGPMAAS-----SWLCIY 373
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 422 DDEGRIDYYAFQVYRFSLSWSRILPTGDIDK-INEKGVQYYRNLIDELLLNNIQPMVTLY 480
+D G + YRFS+SW R+LP G + +N +G+ YY NLI+E+L N +QP VTL+
Sbjct: 77 EDIGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLF 136
Query: 481 HWDLPQPLQD-FGGWTNAIIADYFETYADFAYKTFGDK 517
HWD+PQ L+D + G+ I D F YA+ +K FGD+
Sbjct: 137 HWDVPQALEDEYRGFLGRNIVDDFRDYAELCFKEFGDR 174
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 13/111 (11%)
Query: 562 DFSSSFDYFGLNHYTSFLVSKKTE-PSPEPSFRNDA--NVVLSDDRK--WPKGASFWLKV 616
+ + SFD+ GLN+Y+S+ +K P+ P+ + D+ N + K P AS WL +
Sbjct: 313 ELTGSFDFLGLNYYSSYYAAKAPRIPNARPAIQTDSLINATFEHNGKPLGPMAASSWLCI 372
Query: 617 VPDGFRALLNWIKKEYNNPPVFITENG--------FSDDGQLDDQGRVDFY 659
P G R LL ++K YNNP ++ITENG S L D R+D+Y
Sbjct: 373 YPQGIRKLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLDTPRIDYY 423
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 528 VNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSF 567
+ D N+ GY AWS+ DN EW GYT RFG+V VDF ++
Sbjct: 434 IGDGVNVKGYFAWSLFDNMEWDSGYTVRFGLVFVDFKNNL 473
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 950 KYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++L + AIG D NV GY AWSL DN EW GYT
Sbjct: 425 RHLYYVLTAIG-DGVNVKGYFAWSLFDNMEWDSGYT 459
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase With
Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase With
Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/437 (39%), Positives = 250/437 (57%), Gaps = 49/437 (11%)
Query: 22 SQDKGGNLGTQMNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDR 81
+Q GG L + FP GF++G ++AA+Q EGA EDG+G+ IWD HT + D
Sbjct: 5 AQQSGGGL----TRGSFPEGFVFGTASAAYQYEGAVKEDGRGQTIWDTFAHTFGK-ITDF 59
Query: 82 QNADVACDSYHKYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINE 141
NADVA D YH+++ED+ L+ D+G YRFS++WSRI P G ++N+ G+ +Y LI+
Sbjct: 60 SNADVAVDQYHRFEEDIQLMADMGMDAYRFSIAWSRIYPNG-VGQVNQAGIDHYNKLIDA 118
Query: 142 VLSKNIQPMVTLNHYDLPQPLQE-FGGWANPVVADYFESFADVAFKTFGDKVPYWITINE 200
+L+K IQP VTL H+DLPQ L++ + GW + + D F ++A+ F+ FGD+V +WIT+NE
Sbjct: 119 LLAKGIQPYVTLYHWDLPQALEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKHWITLNE 178
Query: 201 PLDV-MGGYGYKSGAP-----YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKS 249
P V + GY AP L+L G+ Y+VAH+ + AHA A +Y KYK+
Sbjct: 179 PHTVAIQGYDAGLQAPGRCSVLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIYRTKYKA 238
Query: 250 LQKGKVSITLDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVD 309
Q G++ I D + P + T+ D EAA+R +F LG FA P + GDYP +R
Sbjct: 239 TQNGQLGIAFDVMWFEPMSNTTI-DIEAAKRAQEFQLGWFADPFFF--GDYPATMR---- 291
Query: 310 QNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAA 369
R RLPRFT +E +KG+ DF +NHYT+ +NN +N + +N+ A
Sbjct: 292 ------ARVGERLPRFTADEAAVVKGALDFVGINHYTTYYTRHNN--TNIIGTLLNNTLA 343
Query: 370 TFSQ--------DPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSDDGR- 420
P +NS WL +VP G R+L+N++K+ YN+PPV+ITENG D
Sbjct: 344 DTGTVSLPFKNGKPIGDRANSIWLYIVPRGMRSLMNYVKERYNSPPVYITENGMDDSNNP 403
Query: 421 -------LDDEGRIDYY 430
L D RI Y+
Sbjct: 404 FISIKDALKDSKRIKYH 420
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 136/290 (46%), Gaps = 68/290 (23%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+G+ IWD HT + D N DVA D YH+++ED+ ++ D+G YRFS++WSRI P
Sbjct: 40 GRGQTIWDTFAHTF-GKITDFSNADVAVDQYHRFEEDIQLMADMGMDAYRFSIAWSRIYP 98
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL--------------------------- 779
G + ++N+ G+ +Y LID LL IQP V L
Sbjct: 99 NG-VGQVNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQALEDKYKGWLDRQIVDDFAA 157
Query: 780 ---------------WITIKET-LEAMQGYDFKTYAP---------YLSMTGVGGE-YLA 813
WIT+ E A+QGYD AP Y G E Y+
Sbjct: 158 YAETCFREFGDRVKHWITLNEPHTVAIQGYDAGLQAPGRCSVLLHLYCKAGNSGTEPYVV 217
Query: 814 AHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGL 873
AH+ + +HA A +Y KYK +Q G++ + + + P+ ++ D EAA+R +F+ G
Sbjct: 218 AHHFILAHAAAASIYRTKYKATQNGQLGIAFDVMWFEPMSNTTI-DIEAAKRAQEFQLGW 276
Query: 874 FAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTE 923
FA P + GDYP +R R RLPRFT +E +KG +
Sbjct: 277 FADPFFF--GDYPATMR----------ARVGERLPRFTADEAAVVKGALD 314
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 434 VYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD-FG 492
YRFS++WSRI P G + ++N+ G+ +Y LID LL IQP VTLYHWDLPQ L+D +
Sbjct: 86 AYRFSIAWSRIYPNG-VGQVNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQALEDKYK 144
Query: 493 GWTNAIIADYFETYADFAYKTFGDK 517
GW + I D F YA+ ++ FGD+
Sbjct: 145 GWLDRQIVDDFAAYAETCFREFGDR 169
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSPEPSFRND----ANVVLSDDRKWPKG---ASFWLKVVP 618
+ D+ G+NHYT++ N V L P G S WL +VP
Sbjct: 312 ALDFVGINHYTTYYTRHNNTNIIGTLLNNTLADTGTVSLPFKNGKPIGDRANSIWLYIVP 371
Query: 619 DGFRALLNWIKKEYNNPPVFITENGFSD 646
G R+L+N++K+ YN+PPV+ITENG D
Sbjct: 372 RGMRSLMNYVKERYNSPPVYITENGMDD 399
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 519 YLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSFDYFGLNHYTSF 578
YLT + ++ D C++ GY AWS+LDN+EW GY+ RFG+ VD+ + + N F
Sbjct: 423 YLTNLAASIKEDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWF 482
Query: 579 LVSKKT 584
KT
Sbjct: 483 KALLKT 488
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 299 bits (766), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 173/416 (41%), Positives = 237/416 (56%), Gaps = 33/416 (7%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
+++ FP F++G T+A+QVEG G+G +IWD HT P V QN DVA D YH
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHT-PGNVAGNQNGDVATDQYH 73
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
+YKEDV L++ + F YRFS+SWSRI P G+ R+N++GV YY NLIN +L K I P V
Sbjct: 74 RYKEDVNLMKSLNFDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVN 132
Query: 153 LNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYGY 210
L HYDLP L+ ++GGW N +AD F +AD FKTFG++V +W T NEP V + GY
Sbjct: 133 LYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQ 192
Query: 211 KSGAP-YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNY 264
+ P GG+ Y+VAHN L +HA A Y KY++ Q+GKV I LD N+
Sbjct: 193 GTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLD-FNW 251
Query: 265 YPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPR 324
Y + S EDQ AA+R F +G + P+ + G YP I++ +V + RLP+
Sbjct: 252 YEALSNSTEDQAAAQRARDFHIGWYLDPLIN--GHYPQIMQDLV----------KDRLPK 299
Query: 325 FTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATF----SQDPNWPSS 380
FT E+ + +KGS D+ +N YT+ + P S D T+ + P P +
Sbjct: 300 FTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQA 359
Query: 381 NSPWLKVVPDGFRALLNWIKKEYNNPPVFITENG------FSDDGRLDDEGRIDYY 430
NS WL +VP G +N+IK++Y NP V ITENG S D L D R+ +Y
Sbjct: 360 NSNWLYIVPWGMYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFY 415
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 143/300 (47%), Gaps = 64/300 (21%)
Query: 673 VNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGF 732
V + V G+G +IWD HT P V QNGDVA D YH+YKEDV ++K L F
Sbjct: 29 VTSAYQVEGMAASGGRGPSIWDAFAHT-PGNVAGNQNGDVATDQYHRYKEDVNLMKSLNF 87
Query: 733 QVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL------------- 779
YRFS+SWSRI P G+ ++N++GV YY NLI+ LL I P V L
Sbjct: 88 DAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKY 146
Query: 780 -----------------------------WITIKE-TLEAMQGYDFKTYAP-YLSMTGVG 808
W T E + A+ GYD T P + G
Sbjct: 147 GGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAG 206
Query: 809 GE-----YLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAA 863
G Y+ AHN L SHA A Y KY+ +Q+GKV + L+ ++ Y +S EDQ AA
Sbjct: 207 GNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNW-YEALSNSTEDQAAA 265
Query: 864 ERYIQFKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTE 923
+R F G + P+ + G YP I++ +V + RLP+FT E+ + +KG +
Sbjct: 266 QRARDFHIGWYLDPLIN--GHYPQIMQDLV----------KDRLPKFTPEQARLVKGSAD 313
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQ-D 490
F YRFS+SWSRI P G+ ++N++GV YY NLI+ LL I P V LYH+DLP L+
Sbjct: 87 FDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKK 145
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
+GGW NA +AD F YADF +KTFG++
Sbjct: 146 YGGWLNAKMADLFTEYADFCFKTFGNR 172
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ YLT ++KA +++ N+ GY AWS+LDNFEWL GYT +FGIV+VDF++
Sbjct: 416 RSYLTQLKKA-IDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFNT 463
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 11/106 (10%)
Query: 566 SFDYFGLNHYT-SFLVSKKTEPSPEPSFRNDANV--VLSDDRK--WPKGASFWLKVVPDG 620
S DY G+N YT S++ ++ S+ D V V + + K P+ S WL +VP G
Sbjct: 311 SADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWG 370
Query: 621 FRALLNWIKKEYNNPPVFITENG------FSDDGQLDDQGRVDFYQ 660
+N+IK++Y NP V ITENG S D L D RV FY+
Sbjct: 371 MYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYR 416
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 951 YLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
YLT L KAI E NV GY AWSLLDNFEWL GYT
Sbjct: 418 YLTQLKKAIDEG-ANVAGYFAWSLLDNFEWLSGYT 451
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 298 bits (763), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 171/434 (39%), Positives = 246/434 (56%), Gaps = 35/434 (8%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
MN +FP GFLWG +TA++Q+EG+ DG G +IW HT P VK+ DVACD Y+
Sbjct: 8 MNVKKFPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHT-PGNVKNGDTGDVACDHYN 66
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
++KED+ +I +G + YRFS+SW RILP G T R+N+KG+ +Y +I+ +L K I P VT
Sbjct: 67 RWKEDIEIIEKLGVKAYRFSISWPRILPEG-TGRVNQKGLDFYNRIIDTLLEKGITPFVT 125
Query: 153 LNHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPL-DVMGGYGYK 211
+ H+DLP LQ GG N +AD+F ++ V F+ FGD+V WIT NEPL + GYG
Sbjct: 126 IFHWDLPFALQLKGGLLNREIADWFAEYSRVLFENFGDRVKNWITFNEPLCSAIPGYGSG 185
Query: 212 SGAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATS 271
+ AP + V HN+L AH +A +++ ++++ GK+ I L+ YP +A
Sbjct: 186 TFAP--GRQSTSEPWTVGHNILVAHGRAVKVFR---ETVKDGKIGIVLNGDFTYPWDAAD 240
Query: 272 KEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIK 331
D+EAAER +F FA PIY GDYP +R+ + RLP FT EE
Sbjct: 241 PADKEAAERRLEFFTAWFADPIY--LGDYPASMRK----------QLGDRLPTFTPEERA 288
Query: 332 ALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNW--PSSNSPWLKVVP 389
+ GS DF+ +NHYTS I + + ++A + N ++ N P + PWL+
Sbjct: 289 LVHGSNDFYGMNHYTSNYIRHRSSPASADDTVGNVDVLFTNKQGNCIGPETAMPWLRPCA 348
Query: 390 DGFRALLNWIKKEYNNPPVFITENG------FSDDGRLDDEGRIDYYAFQVYRFSLSWSR 443
GFR L WI K Y PP+++TENG S+DGR+ D+ RIDY +
Sbjct: 349 AGFRDFLVWISKRYGYPPIYVTENGAAFDDVVSEDGRVHDQNRIDYLKAYI-------GA 401
Query: 444 ILPTGDIDKINEKG 457
++ ++D +N KG
Sbjct: 402 MVTAVELDGVNVKG 415
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 137/297 (46%), Gaps = 61/297 (20%)
Query: 669 FWFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIK 728
W + + + + G G +IW HT P V + GDVACD Y+++KED+ II+
Sbjct: 18 LWGVATASYQIEGSPLADGAGMSIWHTFSHT-PGNVKNGDTGDVACDHYNRWKEDIEIIE 76
Query: 729 DLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL--------- 779
LG + YRFS+SW RILP G ++N+KG+ +Y +ID LL I P V +
Sbjct: 77 KLGVKAYRFSISWPRILPEG-TGRVNQKGLDFYNRIIDTLLEKGITPFVTIFHWDLPFAL 135
Query: 780 --------------------------------WITIKETL-EAMQGYDFKTYAPYLSMTG 806
WIT E L A+ GY T+AP T
Sbjct: 136 QLKGGLLNREIADWFAEYSRVLFENFGDRVKNWITFNEPLCSAIPGYGSGTFAPGRQSTS 195
Query: 807 VGGEYLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERY 866
+ HN+L +H +A +++ + K GK+ + LN F YP D + D+EAAER
Sbjct: 196 E--PWTVGHNILVAHGRAVKVFRETVK---DGKIGIVLNGDFTYPWDAADPADKEAAERR 250
Query: 867 IQFKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTE 923
++F FA PIY GDYP +R+ + RLP FT EE + G +
Sbjct: 251 LEFFTAWFADPIY--LGDYPASMRK----------QLGDRLPTFTPEERALVHGSND 295
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 427 IDYYAFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQ 486
I+ + YRFS+SW RILP G ++N+KG+ +Y +ID LL I P VT++HWDLP
Sbjct: 75 IEKLGVKAYRFSISWPRILPEG-TGRVNQKGLDFYNRIIDTLLEKGITPFVTIFHWDLPF 133
Query: 487 PLQDFGGWTNAIIADYFETYADFAYKTFGDK 517
LQ GG N IAD+F Y+ ++ FGD+
Sbjct: 134 ALQLKGGLLNREIADWFAEYSRVLFENFGDR 164
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 9/105 (8%)
Query: 565 SSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRK---WPKGASFWLKVVPDGF 621
S D++G+NHYTS + ++ P+ + +V+ ++ + P+ A WL+ GF
Sbjct: 292 GSNDFYGMNHYTSNYIRHRSSPASADDTVGNVDVLFTNKQGNCIGPETAMPWLRPCAAGF 351
Query: 622 RALLNWIKKEYNNPPVFITENG------FSDDGQLDDQGRVDFYQ 660
R L WI K Y PP+++TENG S+DG++ DQ R+D+ +
Sbjct: 352 RDFLVWISKRYGYPPIYVTENGAAFDDVVSEDGRVHDQNRIDYLK 396
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
K Y+ AM A+ D N+ GY WS+LDNFEW +GY+ RFGIV+VD+S+
Sbjct: 396 KAYIGAMVTAVELDGVNVKGYFVWSLLDNFEWAEGYSKRFGIVYVDYST 444
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 946 DKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
D Y+ A+ A+ D NV GY WSLLDNFEW GY+
Sbjct: 393 DYLKAYIGAMVTAVELDGVNVKGYFVWSLLDNFEWAEGYS 432
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 298 bits (763), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 237/416 (56%), Gaps = 33/416 (7%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
+++ FP F++G T+A+QVEG G+G +IWD HT P V QN DVA D YH
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHT-PGNVAGNQNGDVATDQYH 73
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
+YKEDV L++ + F YRFS+SWSRI P G+ R+N++GV YY NLIN +L K I P V
Sbjct: 74 RYKEDVNLMKSLNFDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVN 132
Query: 153 LNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYGY 210
L HYDLP L+ ++GGW N +AD F +AD FKTFG++V +W T N+P V + GY
Sbjct: 133 LYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNQPRIVALLGYDQ 192
Query: 211 KSGAP-YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNY 264
+ P GG+ Y+VAHN L +HA A Y KY++ Q+GKV I LD N+
Sbjct: 193 GTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLD-FNW 251
Query: 265 YPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPR 324
Y + S EDQ AA+R F +G + P+ + G YP I++ +V + RLP+
Sbjct: 252 YEALSNSTEDQAAAQRARDFHIGWYLDPLIN--GHYPQIMQDLV----------KDRLPK 299
Query: 325 FTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATF----SQDPNWPSS 380
FT E+ + +KGS D+ +N YT+ + P S D T+ + P P +
Sbjct: 300 FTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQA 359
Query: 381 NSPWLKVVPDGFRALLNWIKKEYNNPPVFITENG------FSDDGRLDDEGRIDYY 430
NS WL +VP G +N+IK++Y NP V ITENG S D L D R+ +Y
Sbjct: 360 NSNWLYIVPWGMYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFY 415
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 143/300 (47%), Gaps = 64/300 (21%)
Query: 673 VNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGF 732
V + V G+G +IWD HT P V QNGDVA D YH+YKEDV ++K L F
Sbjct: 29 VTSAYQVEGMAASGGRGPSIWDAFAHT-PGNVAGNQNGDVATDQYHRYKEDVNLMKSLNF 87
Query: 733 QVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL------------- 779
YRFS+SWSRI P G+ ++N++GV YY NLI+ LL I P V L
Sbjct: 88 DAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKY 146
Query: 780 -----------------------------WITIKE-TLEAMQGYDFKTYAP-YLSMTGVG 808
W T + + A+ GYD T P + G
Sbjct: 147 GGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNQPRIVALLGYDQGTNPPKRCTKCAAG 206
Query: 809 GE-----YLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAA 863
G Y+ AHN L SHA A Y KY+ +Q+GKV + L+ ++ Y +S EDQ AA
Sbjct: 207 GNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNW-YEALSNSTEDQAAA 265
Query: 864 ERYIQFKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTE 923
+R F G + P+ + G YP I++ +V + RLP+FT E+ + +KG +
Sbjct: 266 QRARDFHIGWYLDPLIN--GHYPQIMQDLV----------KDRLPKFTPEQARLVKGSAD 313
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQ-D 490
F YRFS+SWSRI P G+ ++N++GV YY NLI+ LL I P V LYH+DLP L+
Sbjct: 87 FDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKK 145
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
+GGW NA +AD F YADF +KTFG++
Sbjct: 146 YGGWLNAKMADLFTEYADFCFKTFGNR 172
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ YLT ++KA +++ N+ GY AWS+LDNFEWL GYT +FGIV+VDF++
Sbjct: 416 RSYLTQLKKA-IDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFNT 463
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 11/106 (10%)
Query: 566 SFDYFGLNHYT-SFLVSKKTEPSPEPSFRNDANV--VLSDDRK--WPKGASFWLKVVPDG 620
S DY G+N YT S++ ++ S+ D V V + + K P+ S WL +VP G
Sbjct: 311 SADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWG 370
Query: 621 FRALLNWIKKEYNNPPVFITENG------FSDDGQLDDQGRVDFYQ 660
+N+IK++Y NP V ITENG S D L D RV FY+
Sbjct: 371 MYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYR 416
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 951 YLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
YLT L KAI E NV GY AWSLLDNFEWL GYT
Sbjct: 418 YLTQLKKAIDEG-ANVAGYFAWSLLDNFEWLSGYT 451
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 297 bits (761), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 236/416 (56%), Gaps = 33/416 (7%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
+++ FP F++G T+A+QVEG G+G +IWD HT P V QN DVA D YH
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHT-PGNVAGNQNGDVATDQYH 73
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
+YKEDV L++ + F YRFS+SWSRI P G+ R+N++GV YY NLIN +L K I P V
Sbjct: 74 RYKEDVNLMKSLNFDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVN 132
Query: 153 LNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYGY 210
L HYDLP L+ ++GGW N +AD F +AD FKTFG++V +W T NEP V + GY
Sbjct: 133 LYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQ 192
Query: 211 KSGAP-YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNY 264
+ P GG+ Y+VAHN L +HA A Y KY++ Q+GKV I LD N+
Sbjct: 193 GTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLD-FNW 251
Query: 265 YPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPR 324
Y + S EDQ AA+R F +G + P+ + G YP I++ +V + RLP+
Sbjct: 252 YEALSNSTEDQAAAQRARDFHIGWYLDPLIN--GHYPQIMQDLV----------KDRLPK 299
Query: 325 FTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATF----SQDPNWPSS 380
FT E+ + +KGS D+ +N YT+ + P S D T+ + P P +
Sbjct: 300 FTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQA 359
Query: 381 NSPWLKVVPDGFRALLNWIKKEYNNPPVFITENG------FSDDGRLDDEGRIDYY 430
NS WL +VP G +N+IK++Y NP V IT NG S D L D R+ +Y
Sbjct: 360 NSNWLYIVPWGMYGCVNYIKQKYGNPTVVITSNGMDQPANLSRDQYLRDTTRVHFY 415
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 143/300 (47%), Gaps = 64/300 (21%)
Query: 673 VNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGF 732
V + V G+G +IWD HT P V QNGDVA D YH+YKEDV ++K L F
Sbjct: 29 VTSAYQVEGMAASGGRGPSIWDAFAHT-PGNVAGNQNGDVATDQYHRYKEDVNLMKSLNF 87
Query: 733 QVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL------------- 779
YRFS+SWSRI P G+ ++N++GV YY NLI+ LL I P V L
Sbjct: 88 DAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKY 146
Query: 780 -----------------------------WITIKE-TLEAMQGYDFKTYAP-YLSMTGVG 808
W T E + A+ GYD T P + G
Sbjct: 147 GGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAG 206
Query: 809 GE-----YLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAA 863
G Y+ AHN L SHA A Y KY+ +Q+GKV + L+ ++ Y +S EDQ AA
Sbjct: 207 GNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNW-YEALSNSTEDQAAA 265
Query: 864 ERYIQFKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTE 923
+R F G + P+ + G YP I++ +V + RLP+FT E+ + +KG +
Sbjct: 266 QRARDFHIGWYLDPLIN--GHYPQIMQDLV----------KDRLPKFTPEQARLVKGSAD 313
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQ-D 490
F YRFS+SWSRI P G+ ++N++GV YY NLI+ LL I P V LYH+DLP L+
Sbjct: 87 FDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKK 145
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
+GGW NA +AD F YADF +KTFG++
Sbjct: 146 YGGWLNAKMADLFTEYADFCFKTFGNR 172
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ YLT ++KA +++ N+ GY AWS+LDNFEWL GYT +FGIV+VDF++
Sbjct: 416 RSYLTQLKKA-IDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFNT 463
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 566 SFDYFGLNHYT-SFLVSKKTEPSPEPSFRNDANV--VLSDDRK--WPKGASFWLKVVPDG 620
S DY G+N YT S++ ++ S+ D V V + + K P+ S WL +VP G
Sbjct: 311 SADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWG 370
Query: 621 FRALLNWIKKEYNNPPVFITENG------FSDDGQLDDQGRVDFYQ 660
+N+IK++Y NP V IT NG S D L D RV FY+
Sbjct: 371 MYGCVNYIKQKYGNPTVVITSNGMDQPANLSRDQYLRDTTRVHFYR 416
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 951 YLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
YLT L KAI E NV GY AWSLLDNFEWL GYT
Sbjct: 418 YLTQLKKAIDEG-ANVAGYFAWSLLDNFEWLSGYT 451
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 236/416 (56%), Gaps = 33/416 (7%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
+++ FP F++G T+A+QVEG G+G +IWD HT P V QN DVA D YH
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHT-PGNVAGNQNGDVATDQYH 73
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
+YKEDV L++ + F YRFS+SWSRI P G+ R+N++GV YY NLIN +L K I P V
Sbjct: 74 RYKEDVNLMKSLNFDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVN 132
Query: 153 LNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYGY 210
L HYDLP L+ ++GGW N +AD F +AD FKTFG++V +W T NEP V + GY
Sbjct: 133 LYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQ 192
Query: 211 KSGAP-YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNY 264
+ P GG+ Y+VAHN L +HA A Y KY++ Q+GKV I LD N+
Sbjct: 193 GTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLD-FNW 251
Query: 265 YPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPR 324
Y + S EDQ AA+R F +G + P+ + G YP I++ +V + RLP+
Sbjct: 252 YEALSNSTEDQAAAQRARDFHIGWYLDPLIN--GHYPQIMQDLV----------KDRLPK 299
Query: 325 FTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATF----SQDPNWPSS 380
FT E+ + +KGS D+ +N YT+ + P S D T+ + P P +
Sbjct: 300 FTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYAADWQVTYVFAKNGKPIGPQA 359
Query: 381 NSPWLKVVPDGFRALLNWIKKEYNNPPVFITENG------FSDDGRLDDEGRIDYY 430
NS WL +VP G +N+IK++Y NP V IT NG S D L D R+ +Y
Sbjct: 360 NSNWLYIVPWGMYGCVNYIKQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFY 415
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 143/300 (47%), Gaps = 64/300 (21%)
Query: 673 VNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGF 732
V + V G+G +IWD HT P V QNGDVA D YH+YKEDV ++K L F
Sbjct: 29 VTSAYQVEGMAASGGRGPSIWDAFAHT-PGNVAGNQNGDVATDQYHRYKEDVNLMKSLNF 87
Query: 733 QVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL------------- 779
YRFS+SWSRI P G+ ++N++GV YY NLI+ LL I P V L
Sbjct: 88 DAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKY 146
Query: 780 -----------------------------WITIKE-TLEAMQGYDFKTYAP-YLSMTGVG 808
W T E + A+ GYD T P + G
Sbjct: 147 GGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAG 206
Query: 809 GE-----YLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAA 863
G Y+ AHN L SHA A Y KY+ +Q+GKV + L+ ++ Y +S EDQ AA
Sbjct: 207 GNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNW-YEALSNSTEDQAAA 265
Query: 864 ERYIQFKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTE 923
+R F G + P+ + G YP I++ +V + RLP+FT E+ + +KG +
Sbjct: 266 QRARDFHIGWYLDPLIN--GHYPQIMQDLV----------KDRLPKFTPEQARLVKGSAD 313
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQ-D 490
F YRFS+SWSRI P G+ ++N++GV YY NLI+ LL I P V LYH+DLP L+
Sbjct: 87 FDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKK 145
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
+GGW NA +AD F YADF +KTFG++
Sbjct: 146 YGGWLNAKMADLFTEYADFCFKTFGNR 172
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ YLT ++KA +++ N+ GY AWS+LDNFEWL GYT +FGIV+VDF++
Sbjct: 416 RSYLTQLKKA-IDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFNT 463
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 565 SSFDYFGLNHYT-SFLVSKKTEPSPEPSFRNDANV--VLSDDRK--WPKGASFWLKVVPD 619
S DY G+N YT S++ ++ S+ D V V + + K P+ S WL +VP
Sbjct: 310 GSADYIGINQYTASYMKGQQLMQQTPTSYAADWQVTYVFAKNGKPIGPQANSNWLYIVPW 369
Query: 620 GFRALLNWIKKEYNNPPVFITENG------FSDDGQLDDQGRVDFYQ 660
G +N+IK++Y NP V IT NG S D L D RV FY+
Sbjct: 370 GMYGCVNYIKQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFYR 416
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 951 YLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
YLT L KAI E NV GY AWSLLDNFEWL GYT
Sbjct: 418 YLTQLKKAIDEG-ANVAGYFAWSLLDNFEWLSGYT 451
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 236/416 (56%), Gaps = 33/416 (7%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
+++ FP F++G T+A+QVEG G+G +IWD HT P V QN DVA D YH
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHT-PGNVAGNQNGDVATDQYH 73
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
+YKEDV L++ + F YRFS+SWSRI P G+ R+N++GV YY NLIN +L K I P V
Sbjct: 74 RYKEDVNLMKSLNFDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVN 132
Query: 153 LNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYGY 210
L HYDLP L+ ++GGW N +AD F +AD FKTFG++V +W T NEP V + GY
Sbjct: 133 LYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQ 192
Query: 211 KSGAP-YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNY 264
+ P GG+ Y+VAHN L +HA A Y KY++ Q+GKV I LD N+
Sbjct: 193 GTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLD-FNW 251
Query: 265 YPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPR 324
Y + S EDQ AA+R F +G + P+ + G YP I++ +V + RLP+
Sbjct: 252 YEALSNSTEDQAAAQRARDFHIGWYLDPLIN--GHYPQIMQDLV----------KDRLPK 299
Query: 325 FTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATF----SQDPNWPSS 380
FT E+ + +KGS D+ +N YT+ + P S D T+ + P P +
Sbjct: 300 FTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQA 359
Query: 381 NSPWLKVVPDGFRALLNWIKKEYNNPPVFITENG------FSDDGRLDDEGRIDYY 430
NS WL +VP G +N+IK++Y NP V IT NG S D L D R+ +Y
Sbjct: 360 NSNWLYIVPWGMYGCVNYIKQKYGNPTVVITANGMDQPANLSRDQYLRDTTRVHFY 415
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 143/300 (47%), Gaps = 64/300 (21%)
Query: 673 VNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGF 732
V + V G+G +IWD HT P V QNGDVA D YH+YKEDV ++K L F
Sbjct: 29 VTSAYQVEGMAASGGRGPSIWDAFAHT-PGNVAGNQNGDVATDQYHRYKEDVNLMKSLNF 87
Query: 733 QVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL------------- 779
YRFS+SWSRI P G+ ++N++GV YY NLI+ LL I P V L
Sbjct: 88 DAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKY 146
Query: 780 -----------------------------WITIKE-TLEAMQGYDFKTYAP-YLSMTGVG 808
W T E + A+ GYD T P + G
Sbjct: 147 GGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAG 206
Query: 809 GE-----YLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAA 863
G Y+ AHN L SHA A Y KY+ +Q+GKV + L+ ++ Y +S EDQ AA
Sbjct: 207 GNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNW-YEALSNSTEDQAAA 265
Query: 864 ERYIQFKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTE 923
+R F G + P+ + G YP I++ +V + RLP+FT E+ + +KG +
Sbjct: 266 QRARDFHIGWYLDPLIN--GHYPQIMQDLV----------KDRLPKFTPEQARLVKGSAD 313
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQ-D 490
F YRFS+SWSRI P G+ ++N++GV YY NLI+ LL I P V LYH+DLP L+
Sbjct: 87 FDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKK 145
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
+GGW NA +AD F YADF +KTFG++
Sbjct: 146 YGGWLNAKMADLFTEYADFCFKTFGNR 172
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ YLT ++KA +++ N+ GY AWS+LDNFEWL GYT +FGIV+VDF++
Sbjct: 416 RSYLTQLKKA-IDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFNT 463
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 566 SFDYFGLNHYT-SFLVSKKTEPSPEPSFRNDANV--VLSDDRK--WPKGASFWLKVVPDG 620
S DY G+N YT S++ ++ S+ D V V + + K P+ S WL +VP G
Sbjct: 311 SADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWG 370
Query: 621 FRALLNWIKKEYNNPPVFITENG------FSDDGQLDDQGRVDFYQ 660
+N+IK++Y NP V IT NG S D L D RV FY+
Sbjct: 371 MYGCVNYIKQKYGNPTVVITANGMDQPANLSRDQYLRDTTRVHFYR 416
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 951 YLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
YLT L KAI E NV GY AWSLLDNFEWL GYT
Sbjct: 418 YLTQLKKAIDEG-ANVAGYFAWSLLDNFEWLSGYT 451
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 236/416 (56%), Gaps = 33/416 (7%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
+++ FP F++G T+A+QVEG G+G +IWD HT P V QN DVA D YH
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHT-PGNVAGNQNGDVATDQYH 73
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
+YKEDV L++ + F YRFS+SWSRI P G+ R+N++GV YY NLIN +L K I P V
Sbjct: 74 RYKEDVNLMKSLNFDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVN 132
Query: 153 LNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYGY 210
L HYDLP L+ ++GGW N +AD F +AD FKTFG++V +W T NEP V + GY
Sbjct: 133 LYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQ 192
Query: 211 KSGAP-YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNY 264
+ P GG+ Y+VAHN L +HA A Y KY++ Q+GKV I LD N+
Sbjct: 193 GTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLD-FNW 251
Query: 265 YPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPR 324
Y + S EDQ AA+R F +G + P+ + G YP I++ +V + RLP+
Sbjct: 252 YEALSNSTEDQAAAQRARDFHIGWYLDPLIN--GHYPQIMQDLV----------KDRLPK 299
Query: 325 FTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATF----SQDPNWPSS 380
FT E+ + +KGS D+ +N YT+ + P S D T+ + P P +
Sbjct: 300 FTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQA 359
Query: 381 NSPWLKVVPDGFRALLNWIKKEYNNPPVFITENG------FSDDGRLDDEGRIDYY 430
NS WL +VP G +N+IK++Y NP V IT NG S D L D R+ +Y
Sbjct: 360 NSNWLYIVPWGMYGCVNYIKQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFY 415
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 143/300 (47%), Gaps = 64/300 (21%)
Query: 673 VNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGF 732
V + V G+G +IWD HT P V QNGDVA D YH+YKEDV ++K L F
Sbjct: 29 VTSAYQVEGMAASGGRGPSIWDAFAHT-PGNVAGNQNGDVATDQYHRYKEDVNLMKSLNF 87
Query: 733 QVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL------------- 779
YRFS+SWSRI P G+ ++N++GV YY NLI+ LL I P V L
Sbjct: 88 DAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKY 146
Query: 780 -----------------------------WITIKE-TLEAMQGYDFKTYAP-YLSMTGVG 808
W T E + A+ GYD T P + G
Sbjct: 147 GGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAG 206
Query: 809 GE-----YLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAA 863
G Y+ AHN L SHA A Y KY+ +Q+GKV + L+ ++ Y +S EDQ AA
Sbjct: 207 GNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNW-YEALSNSTEDQAAA 265
Query: 864 ERYIQFKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTE 923
+R F G + P+ + G YP I++ +V + RLP+FT E+ + +KG +
Sbjct: 266 QRARDFHIGWYLDPLIN--GHYPQIMQDLV----------KDRLPKFTPEQARLVKGSAD 313
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQ-D 490
F YRFS+SWSRI P G+ ++N++GV YY NLI+ LL I P V LYH+DLP L+
Sbjct: 87 FDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKK 145
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
+GGW NA +AD F YADF +KTFG++
Sbjct: 146 YGGWLNAKMADLFTEYADFCFKTFGNR 172
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ YLT ++KA +++ N+ GY AWS+LDNFEWL GYT +FGIV+VDF++
Sbjct: 416 RSYLTQLKKA-IDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFNT 463
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 566 SFDYFGLNHYT-SFLVSKKTEPSPEPSFRNDANV--VLSDDRK--WPKGASFWLKVVPDG 620
S DY G+N YT S++ ++ S+ D V V + + K P+ S WL +VP G
Sbjct: 311 SADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWG 370
Query: 621 FRALLNWIKKEYNNPPVFITENG------FSDDGQLDDQGRVDFYQ 660
+N+IK++Y NP V IT NG S D L D RV FY+
Sbjct: 371 MYGCVNYIKQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFYR 416
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 951 YLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
YLT L KAI E NV GY AWSLLDNFEWL GYT
Sbjct: 418 YLTQLKKAIDEG-ANVAGYFAWSLLDNFEWLSGYT 451
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 173/416 (41%), Positives = 238/416 (57%), Gaps = 33/416 (7%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
+++ FP F++G T+A+QVEG G+G +IWD HT P V QN DVA D YH
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHT-PGNVAGNQNGDVATDQYH 73
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
+YKEDV L++ + F YRFS+SWSRI P G+ R+N++GV YY NLIN +L K I P V
Sbjct: 74 RYKEDVNLMKSLNFDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVN 132
Query: 153 LNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYGY 210
L HYDLP L+ ++GGW N +AD F +AD FKTFG++V +W T NEP V + GY
Sbjct: 133 LYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQ 192
Query: 211 KSGAP-YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNY 264
+ P GG+ Y+VAHN L +HA A Y KY++ Q+GKV I LD N+
Sbjct: 193 GTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLD-FNW 251
Query: 265 YPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPR 324
Y + S EDQ AA+R F +G + P+ + G YP I++ +V + RLP+
Sbjct: 252 YEALSNSTEDQAAAQRARDFHIGWYLDPLIN--GHYPQIMQDLV----------KDRLPK 299
Query: 325 FTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTIND--RAATFSQD--PNWPSS 380
FT E+ + +KGS D+ +N YT+ + P S D A F+++ P P +
Sbjct: 300 FTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTAVFAKNGKPIGPQA 359
Query: 381 NSPWLKVVPDGFRALLNWIKKEYNNPPVFITENG------FSDDGRLDDEGRIDYY 430
NS WL +VP G +N+IK++Y NP V IT NG S D L D R+ +Y
Sbjct: 360 NSNWLYIVPWGMYGCVNYIKQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFY 415
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 143/300 (47%), Gaps = 64/300 (21%)
Query: 673 VNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGF 732
V + V G+G +IWD HT P V QNGDVA D YH+YKEDV ++K L F
Sbjct: 29 VTSAYQVEGMAASGGRGPSIWDAFAHT-PGNVAGNQNGDVATDQYHRYKEDVNLMKSLNF 87
Query: 733 QVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL------------- 779
YRFS+SWSRI P G+ ++N++GV YY NLI+ LL I P V L
Sbjct: 88 DAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKY 146
Query: 780 -----------------------------WITIKE-TLEAMQGYDFKTYAP-YLSMTGVG 808
W T E + A+ GYD T P + G
Sbjct: 147 GGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAG 206
Query: 809 GE-----YLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAA 863
G Y+ AHN L SHA A Y KY+ +Q+GKV + L+ ++ Y +S EDQ AA
Sbjct: 207 GNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNW-YEALSNSTEDQAAA 265
Query: 864 ERYIQFKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTE 923
+R F G + P+ + G YP I++ +V + RLP+FT E+ + +KG +
Sbjct: 266 QRARDFHIGWYLDPLIN--GHYPQIMQDLV----------KDRLPKFTPEQARLVKGSAD 313
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQ-D 490
F YRFS+SWSRI P G+ ++N++GV YY NLI+ LL I P V LYH+DLP L+
Sbjct: 87 FDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKK 145
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
+GGW NA +AD F YADF +KTFG++
Sbjct: 146 YGGWLNAKMADLFTEYADFCFKTFGNR 172
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ YLT ++KA +++ N+ GY AWS+LDNFEWL GYT +FGIV+VDF++
Sbjct: 416 RSYLTQLKKA-IDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFNT 463
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 566 SFDYFGLNHYT-SFLVSKKTEPSPEPSFRNDANV--VLSDDRK--WPKGASFWLKVVPDG 620
S DY G+N YT S++ ++ S+ D V V + + K P+ S WL +VP G
Sbjct: 311 SADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTAVFAKNGKPIGPQANSNWLYIVPWG 370
Query: 621 FRALLNWIKKEYNNPPVFITENG------FSDDGQLDDQGRVDFYQ 660
+N+IK++Y NP V IT NG S D L D RV FY+
Sbjct: 371 MYGCVNYIKQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFYR 416
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 951 YLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
YLT L KAI E NV GY AWSLLDNFEWL GYT
Sbjct: 418 YLTQLKKAIDEG-ANVAGYFAWSLLDNFEWLSGYT 451
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 296 bits (757), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 177/430 (41%), Positives = 255/430 (59%), Gaps = 52/430 (12%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
+++ FP GF++G +++++Q EG E G+G +IWD H P+ + DR N DVA DSYH
Sbjct: 29 VSRRSFPKGFIFGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPEKIADRSNGDVASDSYH 88
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGD-TDRINEKGVQYYRNLINEVLSKNIQPMV 151
YKEDV L++D+G YRFS+SW+RILP G +N++G++YY NLINE+LSK +QP +
Sbjct: 89 LYKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFI 148
Query: 152 TLNHYDLPQPLQE-FGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGY 210
TL H+D PQ L++ + G+ +P + + F+ +A++ FK FGD+V WIT NEP GY
Sbjct: 149 TLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSN-GY 207
Query: 211 KSG-------APYLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSIT 258
+G +P+ + GD Y H+ L AHA+ RLY+ KY++LQKGK+ IT
Sbjct: 208 ATGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGIT 267
Query: 259 LDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRA 318
L S + P + SK + +AA+R F G F P+ GDYP +R +V
Sbjct: 268 LVSHWFVPF-SRSKSNNDAAKRAIDFMFGWFMDPLIR--GDYPLSMRGLVG--------- 315
Query: 319 RSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPST-INDRAATFSQD--- 374
+RLP+FT+E+ K +KG+FDF LN+YT+ N+ N PPS +N+ T S+
Sbjct: 316 -NRLPQFTKEQSKLVKGAFDFIGLNYYTA------NYADNLPPSNGLNNSYTTDSRANLT 368
Query: 375 ------PNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD--------DGR 420
P P + SPWL V P GFR LL ++K+ Y NP V+ITENG +
Sbjct: 369 GVRNGIPIGPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEA 428
Query: 421 LDDEGRIDYY 430
L D+ RI+YY
Sbjct: 429 LKDDARIEYY 438
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 143/284 (50%), Gaps = 67/284 (23%)
Query: 691 NIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILPTGDI 750
+IWD H +P + D+ NGDVA DSYH YKEDV ++KD+G YRFS+SW+RILP G +
Sbjct: 61 SIWDTFTHQHPEKIADRSNGDVASDSYHLYKEDVRLMKDMGMDAYRFSISWTRILPNGSL 120
Query: 751 -DKINEKGVQYYRNLIDELLLNNIQPMVKL------------------------------ 779
+N++G++YY NLI+ELL +QP + L
Sbjct: 121 RGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSPQALEDKYNGFLSPNIINDFKDYAE 180
Query: 780 ------------WITIKETLE-AMQGYDFKTYAP---------YLSMTGVGGE-YLAAHN 816
WIT E GY +AP S+ G E Y A H+
Sbjct: 181 ICFKEFGDRVKNWITFNEPWTFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYTACHH 240
Query: 817 LLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAH 876
L +HA+ RLY+ KY+ QKGK+ +TL +H+ P SK + +AA+R I F FG F
Sbjct: 241 QLLAHAETVRLYKAKYQALQKGKIGITLVSHWFVPFS-RSKSNNDAAKRAIDFMFGWFMD 299
Query: 877 PIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 920
P+ GDYP +R +V +RLP+FT+E+ K +KG
Sbjct: 300 PLIR--GDYPLSMRGLVG----------NRLPQFTKEQSKLVKG 331
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 70/105 (66%), Gaps = 7/105 (6%)
Query: 415 FSDDGRLDDEGRIDYYAFQVYRFSLSWSRILPTGDI-DKINEKGVQYYRNLIDELLLNNI 473
+ +D RL + +D YRFS+SW+RILP G + +N++G++YY NLI+ELL +
Sbjct: 90 YKEDVRLMKDMGMD-----AYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGV 144
Query: 474 QPMVTLYHWDLPQPLQD-FGGWTNAIIADYFETYADFAYKTFGDK 517
QP +TL+HWD PQ L+D + G+ + I + F+ YA+ +K FGD+
Sbjct: 145 QPFITLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDR 189
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 15/109 (13%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSP--EPSFRNDANVVLSDDRKW----PKGASFWLKVVPD 619
+FD+ GLN+YT+ + PS S+ D+ L+ R P+ AS WL V P
Sbjct: 332 AFDFIGLNYYTA-NYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQAASPWLYVYPQ 390
Query: 620 GFRALLNWIKKEYNNPPVFITENGFSD--------DGQLDDQGRVDFYQ 660
GFR LL ++K+ Y NP V+ITENG + L D R+++Y
Sbjct: 391 GFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYH 439
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 518 KYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFS 564
K+L ++ A + D N+ GY AWS+LDNFEW +GYT RFGI VD++
Sbjct: 440 KHLLSLLSA-IRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYN 485
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
+K+L +L AI D NV GY AWSLLDNFEW GYT
Sbjct: 439 HKHLLSLLSAI-RDGANVKGYFAWSLLDNFEWSNGYT 474
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 192/545 (35%), Positives = 268/545 (49%), Gaps = 114/545 (20%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
FPP FL+G +T+A+Q+EGAWNEDGKG + WDH H P+ + DR N DVA DSYH Y ED
Sbjct: 76 FPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDVAADSYHMYAED 135
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGD-TDRINEKGVQYYRNLINEVLSKNIQPMVTLNHY 156
V L++++G YRFS+SW RILP G INEKGV+YY LI+ +L I+P +T+ H+
Sbjct: 136 VRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEYYNKLIDLLLENGIEPYITIFHW 195
Query: 157 DLPQPLQE-FGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMG-GYGYKSGA 214
D PQ L E +GG+ + + + FA V F+ FG V W+T N+P YG A
Sbjct: 196 DTPQALVEAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNDPETFCSVSYGTGVLA 255
Query: 215 PYLNLSG----------LGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNY 264
P G L Y+VAHNLLRAHA+ +Y K +K G++ + L+
Sbjct: 256 PGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNKYHKG-ADGRIGLALNVFGR 314
Query: 265 YPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPR 324
P+ T DQ+A ER LG F P+ GDYP +R AR R+P
Sbjct: 315 VPYTNTFL-DQQAQERSMDKCLGWFLEPVVR--GDYPFSMRV----------SARDRVPY 361
Query: 325 FTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNS-- 382
F E+E + L GS+D +N+YTS + + + N P +N A SQ+ P N+
Sbjct: 362 FKEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSP-VLNTDDAYASQETKGPDGNAIG 420
Query: 383 -----PWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSDDGRLDDEGRIDYYAFQVYRF 437
W+ + P G +L +K +Y NPP++ITENG
Sbjct: 421 PPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGM---------------------- 458
Query: 438 SLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDFGGWTNA 497
GDIDK DLP+P+
Sbjct: 459 ----------GDIDK-----------------------------GDLPKPVA-------- 471
Query: 498 IIADYFETYADFAYKTFGDKKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFG 557
E + Y +++L+ ++++ ++ ++ GY AWS+LDNFEW GYT RFG
Sbjct: 472 -----LEDHTRLDYI----QRHLSVLKQS-IDLGADVRGYFAWSLLDNFEWSSGYTERFG 521
Query: 558 IVHVD 562
IV+VD
Sbjct: 522 IVYVD 526
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 141/311 (45%), Gaps = 73/311 (23%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKG + WD H P +VD+ NGDVA DSYH Y EDV ++K++G YRFS+SW RILP
Sbjct: 99 GKGPSTWDHFCHNFPEWIVDRSNGDVAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILP 158
Query: 747 TGDI-DKINEKGVQYYRNLIDELLLNNIQPMVKL--WITIKETLEAMQGY---------- 793
G + INEKGV+YY LID LL N I+P + + W T + +EA G+
Sbjct: 159 KGTLAGGINEKGVEYYNKLIDLLLENGIEPYITIFHWDTPQALVEAYGGFLDERIIKDYT 218
Query: 794 ---------------------DFKTYAPYLSMTGV--------------------GGEYL 812
D +T+ TGV Y+
Sbjct: 219 DFAKVCFEKFGKTVKNWLTFNDPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYI 278
Query: 813 AAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFG 872
AHNLLR+HA+ +Y KY G++ L LN P ++ DQ+A ER + G
Sbjct: 279 VAHNLLRAHAETVDIY-NKYHKGADGRIGLALNVFGRVPYT-NTFLDQQAQERSMDKCLG 336
Query: 873 LFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTEEEINALKGK 932
F P+ GDYP +R AR R+P F E+E + L G + + G
Sbjct: 337 WFLEPVVR--GDYPFSMRV----------SARDRVPYFKEKEQEKLVGSYD-----MIGI 379
Query: 933 QKYLTALSKAI 943
Y + SK I
Sbjct: 380 NYYTSTFSKHI 390
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 17/111 (15%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSPEPS-FRNDANVVLSDDRKWPKGASF-------WLKVV 617
S+D G+N+YTS SK + SP S N + S + K P G + W+ +
Sbjct: 373 SYDMIGINYYTSTF-SKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPTGNAWINMY 431
Query: 618 PDGFRALLNWIKKEYNNPPVFITENGFSDDGQ--------LDDQGRVDFYQ 660
P G +L +K +Y NPP++ITENG D + L+D R+D+ Q
Sbjct: 432 PKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQ 482
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 930 KGKQKYLTALSKAIGEDKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
KG AL D ++L+ L ++I + +V GY AWSLLDNFEW GYT
Sbjct: 463 KGDLPKPVALEDHTRLDYIQRHLSVLKQSI-DLGADVRGYFAWSLLDNFEWSSGYT 517
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 291 bits (746), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 192/545 (35%), Positives = 268/545 (49%), Gaps = 114/545 (20%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
FPP FL+G +T+A+Q+EGAWNEDGKG + WDH H P+ + DR N DVA DSYH Y ED
Sbjct: 76 FPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDVAADSYHMYAED 135
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGD-TDRINEKGVQYYRNLINEVLSKNIQPMVTLNHY 156
V L++++G YRFS+SW RILP G INEK V+YY LI+ +L I+P +T+ H+
Sbjct: 136 VRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHW 195
Query: 157 DLPQPLQE-FGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMG-GYGYKSGA 214
D PQ L + +GG+ + + + FA V F+ FG KV W+T NEP YG A
Sbjct: 196 DTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLA 255
Query: 215 PYLNLSG----------LGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNY 264
P G L Y+VAHNLLRAHA+ +Y K +K G++ + L+
Sbjct: 256 PGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNKYHKGAD-GRIGLALNVFGR 314
Query: 265 YPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPR 324
P+ T DQ+A ER LG F P+ GDYP +R AR R+P
Sbjct: 315 VPYTNTFL-DQQAQERSMDKCLGWFLEPVVR--GDYPFSMRV----------SARDRVPY 361
Query: 325 FTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNS-- 382
F E+E + L GS+D +N+YTS + + + N P +N A SQ+ P N+
Sbjct: 362 FKEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSP-VLNTDDAYASQETKGPDGNAIG 420
Query: 383 -----PWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSDDGRLDDEGRIDYYAFQVYRF 437
W+ + P G +L +K +Y NPP++ITENG
Sbjct: 421 PPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGM---------------------- 458
Query: 438 SLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDFGGWTNA 497
GDIDK DLP+P+
Sbjct: 459 ----------GDIDK-----------------------------GDLPKPVA-------- 471
Query: 498 IIADYFETYADFAYKTFGDKKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFG 557
E + Y +++L+ ++++ ++ ++ GY AWS+LDNFEW GYT RFG
Sbjct: 472 -----LEDHTRLDYI----QRHLSVLKQS-IDLGADVRGYFAWSLLDNFEWSSGYTERFG 521
Query: 558 IVHVD 562
IV+VD
Sbjct: 522 IVYVD 526
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 141/311 (45%), Gaps = 73/311 (23%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKG + WD H P +VD+ NGDVA DSYH Y EDV ++K++G YRFS+SW RILP
Sbjct: 99 GKGPSTWDHFCHNFPEWIVDRSNGDVAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILP 158
Query: 747 TGDI-DKINEKGVQYYRNLIDELLLNNIQPMVKL--WITIKETLEAMQGY---------- 793
G + INEK V+YY LID LL N I+P + + W T + ++A G+
Sbjct: 159 KGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYT 218
Query: 794 DF---------------------KTYAPYLSMTGV--------------------GGEYL 812
DF +T+ TGV Y+
Sbjct: 219 DFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYI 278
Query: 813 AAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFG 872
AHNLLR+HA+ +Y KY G++ L LN P ++ DQ+A ER + G
Sbjct: 279 VAHNLLRAHAETVDIY-NKYHKGADGRIGLALNVFGRVPYT-NTFLDQQAQERSMDKCLG 336
Query: 873 LFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTEEEINALKGK 932
F P+ GDYP +R AR R+P F E+E + L G + + G
Sbjct: 337 WFLEPVVR--GDYPFSMRV----------SARDRVPYFKEKEQEKLVGSYD-----MIGI 379
Query: 933 QKYLTALSKAI 943
Y + SK I
Sbjct: 380 NYYTSTFSKHI 390
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 17/111 (15%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSPEPS-FRNDANVVLSDDRKWPKGASF-------WLKVV 617
S+D G+N+YTS SK + SP S N + S + K P G + W+ +
Sbjct: 373 SYDMIGINYYTSTF-SKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPTGNAWINMY 431
Query: 618 PDGFRALLNWIKKEYNNPPVFITENGFSDDGQ--------LDDQGRVDFYQ 660
P G +L +K +Y NPP++ITENG D + L+D R+D+ Q
Sbjct: 432 PKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQ 482
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 930 KGKQKYLTALSKAIGEDKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
KG AL D ++L+ L ++I + +V GY AWSLLDNFEW GYT
Sbjct: 463 KGDLPKPVALEDHTRLDYIQRHLSVLKQSI-DLGADVRGYFAWSLLDNFEWSSGYT 517
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 191/545 (35%), Positives = 267/545 (48%), Gaps = 114/545 (20%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
FPP FL+G +T+A+Q+EGAWNEDGKG + WDH H P+ + DR N DVA DSYH Y ED
Sbjct: 76 FPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDVAADSYHMYAED 135
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGD-TDRINEKGVQYYRNLINEVLSKNIQPMVTLNHY 156
V L++++G YRFS+SW RILP G INEK V+YY LI+ +L I+P +T+ H+
Sbjct: 136 VRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHW 195
Query: 157 DLPQPLQE-FGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMG-GYGYKSGA 214
D PQ L + +GG+ + + + FA V F+ FG V W+T NEP YG A
Sbjct: 196 DTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNEPETFCSVSYGTGVLA 255
Query: 215 PYLNLSG----------LGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNY 264
P G L Y+VAHNLLRAHA+ +Y K +K G++ + L+
Sbjct: 256 PGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNKYHKG-ADGRIGLALNVFGR 314
Query: 265 YPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPR 324
P+ T DQ+A ER LG F P+ GDYP +R AR R+P
Sbjct: 315 VPYTNTFL-DQQAQERSMDKCLGWFLEPVVR--GDYPFSMRV----------SARDRVPY 361
Query: 325 FTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNS-- 382
F E+E + L GS+D +N+YTS + + + N P +N A SQ+ P N+
Sbjct: 362 FKEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSP-VLNTDDAYASQETKGPDGNAIG 420
Query: 383 -----PWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSDDGRLDDEGRIDYYAFQVYRF 437
W+ + P G +L +K +Y NPP++ITENG
Sbjct: 421 PPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGM---------------------- 458
Query: 438 SLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDFGGWTNA 497
GDIDK DLP+P+
Sbjct: 459 ----------GDIDK-----------------------------GDLPKPVA-------- 471
Query: 498 IIADYFETYADFAYKTFGDKKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFG 557
E + Y +++L+ ++++ ++ ++ GY AWS+LDNFEW GYT RFG
Sbjct: 472 -----LEDHTRLDYI----QRHLSVLKQS-IDLGADVRGYFAWSLLDNFEWSSGYTERFG 521
Query: 558 IVHVD 562
IV+VD
Sbjct: 522 IVYVD 526
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 143/311 (45%), Gaps = 73/311 (23%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKG + WD H P +VD+ NGDVA DSYH Y EDV ++K++G YRFS+SW RILP
Sbjct: 99 GKGPSTWDHFCHNFPEWIVDRSNGDVAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILP 158
Query: 747 TGDI-DKINEKGVQYYRNLIDELLLNNIQPMVKL--WITIKETLEAMQGY---------- 793
G + INEK V+YY LID LL N I+P + + W T + ++A G+
Sbjct: 159 KGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYT 218
Query: 794 DF---------KTYAPYLSM------------TGV--------------------GGEYL 812
DF KT +L+ TGV Y+
Sbjct: 219 DFAKVCFEKFGKTVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYI 278
Query: 813 AAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFG 872
AHNLLR+HA+ +Y KY G++ L LN P ++ DQ+A ER + G
Sbjct: 279 VAHNLLRAHAETVDIY-NKYHKGADGRIGLALNVFGRVPYT-NTFLDQQAQERSMDKCLG 336
Query: 873 LFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTEEEINALKGK 932
F P+ GDYP +R AR R+P F E+E + L G + + G
Sbjct: 337 WFLEPVVR--GDYPFSMRV----------SARDRVPYFKEKEQEKLVGSYD-----MIGI 379
Query: 933 QKYLTALSKAI 943
Y + SK I
Sbjct: 380 NYYTSTFSKHI 390
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 17/111 (15%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSPEPS-FRNDANVVLSDDRKWPKGASF-------WLKVV 617
S+D G+N+YTS SK + SP S N + S + K P G + W+ +
Sbjct: 373 SYDMIGINYYTSTF-SKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPTGNAWINMY 431
Query: 618 PDGFRALLNWIKKEYNNPPVFITENGFSDDGQ--------LDDQGRVDFYQ 660
P G +L +K +Y NPP++ITENG D + L+D R+D+ Q
Sbjct: 432 PKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQ 482
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 930 KGKQKYLTALSKAIGEDKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
KG AL D ++L+ L ++I + +V GY AWSLLDNFEW GYT
Sbjct: 463 KGDLPKPVALEDHTRLDYIQRHLSVLKQSI-DLGADVRGYFAWSLLDNFEWSSGYT 517
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 164/418 (39%), Positives = 237/418 (56%), Gaps = 41/418 (9%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
F FL+G ST+A+Q+EGAWNEDGKG + WDH HT P+ + D N DVA +SYH Y+ED
Sbjct: 74 FDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTNGDVAANSYHLYEED 133
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYD 157
V ++D+G +VYRFS+SWSRILP G T ++N+ G+ YY LIN ++ +I P VT+ H+D
Sbjct: 134 VKALKDMGMKVYRFSISWSRILPDG-TGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWD 192
Query: 158 LPQPLQE-FGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSG--- 213
PQ L++ +GG+ N + D ++ FA+V FK FGD+V W T NEP + Y G
Sbjct: 193 TPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNEP-HTYCCFSYGEGIHA 251
Query: 214 ----APYLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNY 264
+P ++ + GD Y H++L AHA+A +L++ +Y K+ + D Y
Sbjct: 252 PGRCSPGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGY 311
Query: 265 YPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPR 324
P+ + +DQ A ER + +G F P+ GDYP +R ++ RLP
Sbjct: 312 EPYQDSFLDDQ-ARERSIDYNMGWFLEPVVR--GDYPFSMRSLIGD----------RLPM 358
Query: 325 FTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRA----ATFSQDPN--WP 378
FT+EE + L S D LN+YTS + + + + P+ D A T D N P
Sbjct: 359 FTKEEQEKLASSCDIMGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTGSDGNDIGP 418
Query: 379 SSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD-DGR------LDDEGRIDY 429
+ + W+ + P G LL +K++Y NPPVFITENG +D +G LDD R+DY
Sbjct: 419 ITGTYWIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDESMPDPLDDWKRLDY 476
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 139/310 (44%), Gaps = 72/310 (23%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKG + WD HT P + D NGDVA +SYH Y+EDV +KD+G +VYRFS+SWSRILP
Sbjct: 97 GKGPSTWDHFCHTYPERISDMTNGDVAANSYHLYEEDVKALKDMGMKVYRFSISWSRILP 156
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPMVKLWI-TIKETLEAMQGY--------DFKT 797
G K+N+ G+ YY LI+ L+ N+I P V +W + LE G D+K
Sbjct: 157 DG-TGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQ 215
Query: 798 YA-------------------PYLSMTGVGGEYLAA------------------------ 814
+A P+ GE + A
Sbjct: 216 FAEVCFKNFGDRVKNWFTFNEPHTYCCFSYGEGIHAPGRCSPGMDCAVPEGDSLREPYTA 275
Query: 815 -HNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGL 873
H++L +HA+A +L++ +Y K+ + + P S +DQ A ER I + G
Sbjct: 276 GHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYEPYQDSFLDDQ-ARERSIDYNMGW 334
Query: 874 FAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTEEEINALKGKQ 933
F P+ GDYP +R ++ RLP FT+EE + L + + G
Sbjct: 335 FLEPVVR--GDYPFSMRSLIGD----------RLPMFTKEEQEKLASSCD-----IMGLN 377
Query: 934 KYLTALSKAI 943
Y + SK +
Sbjct: 378 YYTSRFSKHV 387
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
+VYRFS+SWSRILP G K+N+ G+ YY LI+ L+ N+I P VT++HWD PQ L+D
Sbjct: 141 GMKVYRFSISWSRILPDG-TGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQALED 199
Query: 491 -FGGWTNAIIADYFETYADFAYKTFGDK 517
+GG+ N I D ++ +A+ +K FGD+
Sbjct: 200 KYGGFLNRQIVDDYKQFAEVCFKNFGDR 227
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 16/113 (14%)
Query: 563 FSSSFDYFGLNHYTSFLVSKKTEPSPE--PSFRNDANVVLSD------DRKWPKGASFWL 614
+SS D GLN+YTS SK + SP+ P+ D S+ + P ++W+
Sbjct: 367 LASSCDIMGLNYYTSRF-SKHVDMSPDFTPTLNTDDAYASSETTGSDGNDIGPITGTYWI 425
Query: 615 KVVPDGFRALLNWIKKEYNNPPVFITENGFSD-DGQ------LDDQGRVDFYQ 660
+ P G LL +K++Y NPPVFITENG +D +G LDD R+D+ Q
Sbjct: 426 YMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDESMPDPLDDWKRLDYLQ 478
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVD 562
+++++A++ A ++ ++ G+ W ++DNFEW GY+ RFG+V++D
Sbjct: 478 QRHISAVKDA-IDQGADVRGHFTWGLIDNFEWSLGYSSRFGLVYID 522
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 922 TEEEINALKGKQKYLTALSKAIGEDKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWL 981
TE I ++G + L D ++++A+ AI + +V G+ W L+DNFEW
Sbjct: 451 TENGIADVEGDESMPDPLDDWKRLDYLQRHISAVKDAI-DQGADVRGHFTWGLIDNFEWS 509
Query: 982 CGYT 985
GY+
Sbjct: 510 LGYS 513
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 168/427 (39%), Positives = 238/427 (55%), Gaps = 52/427 (12%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
FP F +G +T+A+Q+EGAWNEDGKGE+ WDH H P+ + D N+D+ +SYH YK D
Sbjct: 19 FPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNSDIGANSYHMYKTD 78
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGDTD-RINEKGVQYYRNLINEVLSKNIQPMVTLNHY 156
V L++++G YRFS+SW RILP G + IN G++YYRNLIN +L I+P VT+ H+
Sbjct: 79 VRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHW 138
Query: 157 DLPQPLQE-FGGWAN----PVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYK 211
D+PQ L+E +GG+ + +V DY FA V F FGDKV W+T NEP + Y
Sbjct: 139 DVPQALEEKYGGFLDKSHKSIVEDY-TYFAKVCFDNFGDKVKNWLTFNEP-QTFTSFSYG 196
Query: 212 SG-------APYLNLSGLGGDYLV-----AHNLLRAHAKAYRLYEKKYKSLQKGKVSITL 259
+G +P L+ + G+ LV HN+L AHA+A LY K YK ++ +
Sbjct: 197 TGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKR-DDTRIGLAF 255
Query: 260 DSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRAR 319
D P+ TS D++A ER + LG F P+ GDYP +R + AR
Sbjct: 256 DVMGRVPY-GTSFLDKQAEERSWDINLGWFLEPVVR--GDYPFSMRSL----------AR 302
Query: 320 SRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPS 379
RLP F +E+ + L GS++ LN+YTS N + + N P +N A SQ+ N P
Sbjct: 303 ERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSP-VLNTDDAYASQEVNGPD 361
Query: 380 S-------NSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD----------DGRLD 422
+PW+ + P+G + LL +K +Y NPP++ITENG D + L+
Sbjct: 362 GKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALN 421
Query: 423 DEGRIDY 429
D R+DY
Sbjct: 422 DYKRLDY 428
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 136/315 (43%), Gaps = 78/315 (24%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKGE+ WD H +P ++D N D+ +SYH YK DV ++K++G YRFS+SW RILP
Sbjct: 42 GKGESNWDHFCHNHPERILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILP 101
Query: 747 TGDID-KINEKGVQYYRNLIDELLLNNIQPMVKL-------------------------- 779
G + IN G++YYRNLI+ LL N I+P V +
Sbjct: 102 KGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVE 161
Query: 780 -------------------WITIKETLEAMQGYDFKT--YAP----------YLSMTGVG 808
W+T E + + + T +AP Y + +
Sbjct: 162 DYTYFAKVCFDNFGDKVKNWLTFNEP-QTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLV 220
Query: 809 GEYLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQ 868
Y A HN+L +HA+A LY K YK ++ L + P +S D++A ER
Sbjct: 221 EPYTAGHNILLAHAEAVDLYNKHYK-RDDTRIGLAFDVMGRVPYG-TSFLDKQAEERSWD 278
Query: 869 FKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTEEEINA 928
G F P+ GDYP +R + AR RLP F +E+ + L G
Sbjct: 279 INLGWFLEPVVR--GDYPFSMRSL----------ARERLPFFKDEQKEKLAGSYN----- 321
Query: 929 LKGKQKYLTALSKAI 943
+ G Y + SK I
Sbjct: 322 MLGLNYYTSRFSKNI 336
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 12/109 (11%)
Query: 415 FSDDGRLDDEGRIDYYAFQVYRFSLSWSRILPTGDIDK-INEKGVQYYRNLIDELLLNNI 473
+ D RL E +D YRFS+SW RILP G + IN G++YYRNLI+ LL N I
Sbjct: 75 YKTDVRLLKEMGMD-----AYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGI 129
Query: 474 QPMVTLYHWDLPQPLQD-FGGWTN----AIIADYFETYADFAYKTFGDK 517
+P VT++HWD+PQ L++ +GG+ + +I+ DY +A + FGDK
Sbjct: 130 EPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDY-TYFAKVCFDNFGDK 177
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 19/116 (16%)
Query: 563 FSSSFDYFGLNHYTSFLVSKKTEPSPEPS-FRNDANVVLSDDRKWPKGASF-------WL 614
+ S++ GLN+YTS SK + SP S N + S + P G W+
Sbjct: 316 LAGSYNMLGLNYYTSRF-SKNIDISPNYSPVLNTDDAYASQEVNGPDGKPIGPPMGNPWI 374
Query: 615 KVVPDGFRALLNWIKKEYNNPPVFITENGFSD----------DGQLDDQGRVDFYQ 660
+ P+G + LL +K +Y NPP++ITENG D + L+D R+D+ Q
Sbjct: 375 YMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQ 430
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 522 AMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVD 562
A K ++ N+ GY AWS+LDNFEW G+T R+GIV+VD
Sbjct: 434 ATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 474
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 922 TEEEINALKGKQKYL---TALSKAIGEDKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNF 978
TE I + K+ L AL+ D +++ L ++I + NV GY AWSLLDNF
Sbjct: 400 TENGIGDVDTKETPLPMEAALNDYKRLDYIQRHIATLKESI-DLGSNVQGYFAWSLLDNF 458
Query: 979 EWLCGYT 985
EW G+T
Sbjct: 459 EWFAGFT 465
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/418 (38%), Positives = 236/418 (56%), Gaps = 41/418 (9%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
F FL+G ST+A+Q+EGAWNEDGKG + WDH HT P+ + D N DVA +SYH Y+ED
Sbjct: 74 FDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTNGDVAANSYHLYEED 133
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYD 157
V ++D+G +VYRFS+SWSRILP G T ++N+ G+ YY LIN ++ +I P VT+ H+D
Sbjct: 134 VKALKDMGMKVYRFSISWSRILPDG-TGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWD 192
Query: 158 LPQPLQE-FGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSG--- 213
PQ L++ +GG+ N + D ++ FA+V FK FGD+V W T N P + Y G
Sbjct: 193 TPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNAP-HTYCCFSYGEGIHA 251
Query: 214 ----APYLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNY 264
+P ++ + GD Y H++L AHA+A +L++ +Y K+ + D Y
Sbjct: 252 PGRCSPGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGY 311
Query: 265 YPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPR 324
P+ + +DQ A ER + +G F P+ GDYP +R ++ RLP
Sbjct: 312 EPYQDSFLDDQ-ARERSIDYNMGWFLEPVVR--GDYPFSMRSLIGD----------RLPM 358
Query: 325 FTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRA----ATFSQDPN--WP 378
FT+EE + L S D LN+YTS + + + + P+ D A T D N P
Sbjct: 359 FTKEEQEKLASSCDIMGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTGSDGNDIGP 418
Query: 379 SSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD-DGR------LDDEGRIDY 429
+ + W+ + P G LL +K++Y NPPVFITENG +D +G LDD R+DY
Sbjct: 419 ITGTYWIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDESMPDPLDDWKRLDY 476
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 139/310 (44%), Gaps = 72/310 (23%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKG + WD HT P + D NGDVA +SYH Y+EDV +KD+G +VYRFS+SWSRILP
Sbjct: 97 GKGPSTWDHFCHTYPERISDMTNGDVAANSYHLYEEDVKALKDMGMKVYRFSISWSRILP 156
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPMVKLWI-TIKETLEAMQGY--------DFKT 797
G K+N+ G+ YY LI+ L+ N+I P V +W + LE G D+K
Sbjct: 157 DG-TGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQ 215
Query: 798 Y-------------------APYLSMTGVGGEYLAA------------------------ 814
+ AP+ GE + A
Sbjct: 216 FAEVCFKNFGDRVKNWFTFNAPHTYCCFSYGEGIHAPGRCSPGMDCAVPEGDSLREPYTA 275
Query: 815 -HNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGL 873
H++L +HA+A +L++ +Y K+ + + P S +DQ A ER I + G
Sbjct: 276 GHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYEPYQDSFLDDQ-ARERSIDYNMGW 334
Query: 874 FAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTEEEINALKGKQ 933
F P+ GDYP +R ++ RLP FT+EE + L + + G
Sbjct: 335 FLEPVVR--GDYPFSMRSLIGD----------RLPMFTKEEQEKLASSCD-----IMGLN 377
Query: 934 KYLTALSKAI 943
Y + SK +
Sbjct: 378 YYTSRFSKHV 387
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
+VYRFS+SWSRILP G K+N+ G+ YY LI+ L+ N+I P VT++HWD PQ L+D
Sbjct: 141 GMKVYRFSISWSRILPDG-TGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQALED 199
Query: 491 -FGGWTNAIIADYFETYADFAYKTFGDK 517
+GG+ N I D ++ +A+ +K FGD+
Sbjct: 200 KYGGFLNRQIVDDYKQFAEVCFKNFGDR 227
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 16/113 (14%)
Query: 563 FSSSFDYFGLNHYTSFLVSKKTEPSPE--PSFRNDANVVLSD------DRKWPKGASFWL 614
+SS D GLN+YTS SK + SP+ P+ D S+ + P ++W+
Sbjct: 367 LASSCDIMGLNYYTSRF-SKHVDMSPDFTPTLNTDDAYASSETTGSDGNDIGPITGTYWI 425
Query: 615 KVVPDGFRALLNWIKKEYNNPPVFITENGFSD-DGQ------LDDQGRVDFYQ 660
+ P G LL +K++Y NPPVFITENG +D +G LDD R+D+ Q
Sbjct: 426 YMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDESMPDPLDDWKRLDYLQ 478
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVD 562
+++++A++ A ++ ++ G+ W ++DNFEW GY+ RFG+V++D
Sbjct: 478 QRHISAVKDA-IDQGADVRGHFTWGLIDNFEWSLGYSSRFGLVYID 522
Score = 37.0 bits (84), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 922 TEEEINALKGKQKYLTALSKAIGEDKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWL 981
TE I ++G + L D ++++A+ AI + +V G+ W L+DNFEW
Sbjct: 451 TENGIADVEGDESMPDPLDDWKRLDYLQRHISAVKDAI-DQGADVRGHFTWGLIDNFEWS 509
Query: 982 CGYT 985
GY+
Sbjct: 510 LGYS 513
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 168/427 (39%), Positives = 238/427 (55%), Gaps = 52/427 (12%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
FP F +G +T+A+Q+EGAWNEDGKGE+ WDH H P+ + D N+D+ +SYH YK D
Sbjct: 24 FPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNSDIGANSYHMYKTD 83
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGDTD-RINEKGVQYYRNLINEVLSKNIQPMVTLNHY 156
V L++++G YRFS+SW RILP G + IN G++YYRNLIN +L I+P VT+ H+
Sbjct: 84 VRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHW 143
Query: 157 DLPQPLQE-FGGWAN----PVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYK 211
D+PQ L+E +GG+ + +V DY FA V F FGDKV W+T NEP + Y
Sbjct: 144 DVPQALEEKYGGFLDKSHKSIVEDY-TYFAKVCFDNFGDKVKNWLTFNEP-QTFTSFSYG 201
Query: 212 SG-------APYLNLSGLGGDYLV-----AHNLLRAHAKAYRLYEKKYKSLQKGKVSITL 259
+G +P L+ + G+ LV HN+L AHA+A LY K YK ++ +
Sbjct: 202 TGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKR-DDTRIGLAF 260
Query: 260 DSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRAR 319
D P+ TS D++A ER + LG F P+ GDYP +R + AR
Sbjct: 261 DVMGRVPY-GTSFLDKQAEERSWDINLGWFLEPVVR--GDYPFSMRSL----------AR 307
Query: 320 SRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPS 379
RLP F +E+ + L GS++ LN+YTS N + + N P +N A SQ+ N P
Sbjct: 308 ERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSP-VLNTDDAYASQEVNGPD 366
Query: 380 S-------NSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD----------DGRLD 422
+PW+ + P+G + LL +K +Y NPP++ITENG D + L+
Sbjct: 367 GKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALN 426
Query: 423 DEGRIDY 429
D R+DY
Sbjct: 427 DYKRLDY 433
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 136/315 (43%), Gaps = 78/315 (24%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKGE+ WD H +P ++D N D+ +SYH YK DV ++K++G YRFS+SW RILP
Sbjct: 47 GKGESNWDHFCHNHPERILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILP 106
Query: 747 TGDID-KINEKGVQYYRNLIDELLLNNIQPMVKL-------------------------- 779
G + IN G++YYRNLI+ LL N I+P V +
Sbjct: 107 KGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVE 166
Query: 780 -------------------WITIKETLEAMQGYDFKT--YAP----------YLSMTGVG 808
W+T E + + + T +AP Y + +
Sbjct: 167 DYTYFAKVCFDNFGDKVKNWLTFNEP-QTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLV 225
Query: 809 GEYLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQ 868
Y A HN+L +HA+A LY K YK ++ L + P +S D++A ER
Sbjct: 226 EPYTAGHNILLAHAEAVDLYNKHYK-RDDTRIGLAFDVMGRVPYG-TSFLDKQAEERSWD 283
Query: 869 FKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTEEEINA 928
G F P+ GDYP +R + AR RLP F +E+ + L G
Sbjct: 284 INLGWFLEPVVR--GDYPFSMRSL----------ARERLPFFKDEQKEKLAGSYN----- 326
Query: 929 LKGKQKYLTALSKAI 943
+ G Y + SK I
Sbjct: 327 MLGLNYYTSRFSKNI 341
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 12/109 (11%)
Query: 415 FSDDGRLDDEGRIDYYAFQVYRFSLSWSRILPTGDIDK-INEKGVQYYRNLIDELLLNNI 473
+ D RL E +D YRFS+SW RILP G + IN G++YYRNLI+ LL N I
Sbjct: 80 YKTDVRLLKEMGMD-----AYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGI 134
Query: 474 QPMVTLYHWDLPQPLQD-FGGWTN----AIIADYFETYADFAYKTFGDK 517
+P VT++HWD+PQ L++ +GG+ + +I+ DY +A + FGDK
Sbjct: 135 EPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDY-TYFAKVCFDNFGDK 182
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 19/116 (16%)
Query: 563 FSSSFDYFGLNHYTSFLVSKKTEPSPEPS-FRNDANVVLSDDRKWPKGASF-------WL 614
+ S++ GLN+YTS SK + SP S N + S + P G W+
Sbjct: 321 LAGSYNMLGLNYYTSRF-SKNIDISPNYSPVLNTDDAYASQEVNGPDGKPIGPPMGNPWI 379
Query: 615 KVVPDGFRALLNWIKKEYNNPPVFITENGFSD----------DGQLDDQGRVDFYQ 660
+ P+G + LL +K +Y NPP++ITENG D + L+D R+D+ Q
Sbjct: 380 YMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQ 435
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 522 AMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVD 562
A K ++ N+ GY AWS+LDNFEW G+T R+GIV+VD
Sbjct: 439 ATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 479
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 922 TEEEINALKGKQKYL---TALSKAIGEDKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNF 978
TE I + K+ L AL+ D +++ L ++I + NV GY AWSLLDNF
Sbjct: 405 TENGIGDVDTKETPLPMEAALNDYKRLDYIQRHIATLKESI-DLGSNVQGYFAWSLLDNF 463
Query: 979 EWLCGYT 985
EW G+T
Sbjct: 464 EWFAGFT 470
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/418 (38%), Positives = 237/418 (56%), Gaps = 41/418 (9%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
F FL+G ST+A+Q+EGAWNEDGKG + WDH HT P+ + D N DVA +SYH Y+ED
Sbjct: 74 FSKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDGTNGDVAANSYHMYEED 133
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYD 157
V ++D+G +VYRFS+SWSRILP G T + N+KG+ YY NLIN ++ I P VT+ H+D
Sbjct: 134 VKALKDMGMKVYRFSISWSRILPNG-TGKPNQKGIDYYNNLINSLIRHGIVPYVTIWHWD 192
Query: 158 LPQPLQE-FGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSG--- 213
PQ L++ +GG+ + + + ++ FA++ F++FGD+V W T NEP + Y G
Sbjct: 193 TPQALEDKYGGFLDKQIVNDYKYFAELCFQSFGDRVKNWFTFNEP-HTYCCFSYGEGIHA 251
Query: 214 ----APYLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNY 264
+P L+ + GD Y H++L AHA+A L++ Y K+ + D Y
Sbjct: 252 PGRCSPGLDCAVPEGDSLREPYTAGHHILLAHAEAVELFKAHYNKHGDSKIGMAFDVMGY 311
Query: 265 YPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPR 324
P+ + +DQ A ER + +G F P+ GDYP +R ++ RLP
Sbjct: 312 EPYQDSFLDDQ-ARERSIDYNMGWFLEPVVR--GDYPFSMRSLIGD----------RLPM 358
Query: 325 FTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRA----ATFSQDPN--WP 378
FT+EE + L S D LN+YTS + + +S+ P+ D A T D N P
Sbjct: 359 FTKEEQEKLASSCDIMGLNYYTSRFSKHVDISSDYTPTLNTDDAYASSETTGSDGNEIGP 418
Query: 379 SSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD-DGR------LDDEGRIDY 429
+ + W+ + P G LL +K++Y NPP+FITENG +D +G LDD R+DY
Sbjct: 419 ITGTYWIYMYPKGLTDLLLIMKEKYGNPPIFITENGIADVEGDPEMPDPLDDWKRLDY 476
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 138/310 (44%), Gaps = 72/310 (23%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKG + WD HT P + D NGDVA +SYH Y+EDV +KD+G +VYRFS+SWSRILP
Sbjct: 97 GKGPSTWDHFCHTYPERISDGTNGDVAANSYHMYEEDVKALKDMGMKVYRFSISWSRILP 156
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL--WITIKETLEAMQGY-------DFKT 797
G K N+KG+ YY NLI+ L+ + I P V + W T + + G+ D+K
Sbjct: 157 NG-TGKPNQKGIDYYNNLINSLIRHGIVPYVTIWHWDTPQALEDKYGGFLDKQIVNDYKY 215
Query: 798 YA---------------------------------------PYLSMTGVGGE-----YLA 813
+A P L G+ Y A
Sbjct: 216 FAELCFQSFGDRVKNWFTFNEPHTYCCFSYGEGIHAPGRCSPGLDCAVPEGDSLREPYTA 275
Query: 814 AHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGL 873
H++L +HA+A L++ Y K+ + + P S +DQ A ER I + G
Sbjct: 276 GHHILLAHAEAVELFKAHYNKHGDSKIGMAFDVMGYEPYQDSFLDDQ-ARERSIDYNMGW 334
Query: 874 FAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTEEEINALKGKQ 933
F P+ GDYP +R ++ RLP FT+EE + L + + G
Sbjct: 335 FLEPVVR--GDYPFSMRSLIGD----------RLPMFTKEEQEKLASSCD-----IMGLN 377
Query: 934 KYLTALSKAI 943
Y + SK +
Sbjct: 378 YYTSRFSKHV 387
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
+VYRFS+SWSRILP G K N+KG+ YY NLI+ L+ + I P VT++HWD PQ L+D
Sbjct: 141 GMKVYRFSISWSRILPNG-TGKPNQKGIDYYNNLINSLIRHGIVPYVTIWHWDTPQALED 199
Query: 491 -FGGWTNAIIADYFETYADFAYKTFGDK 517
+GG+ + I + ++ +A+ +++FGD+
Sbjct: 200 KYGGFLDKQIVNDYKYFAELCFQSFGDR 227
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 16/113 (14%)
Query: 563 FSSSFDYFGLNHYTSFLVSKKTEPSPE--PSFRNDANVVLSD------DRKWPKGASFWL 614
+SS D GLN+YTS SK + S + P+ D S+ + P ++W+
Sbjct: 367 LASSCDIMGLNYYTSRF-SKHVDISSDYTPTLNTDDAYASSETTGSDGNEIGPITGTYWI 425
Query: 615 KVVPDGFRALLNWIKKEYNNPPVFITENGFSD-DGQ------LDDQGRVDFYQ 660
+ P G LL +K++Y NPP+FITENG +D +G LDD R+D+ Q
Sbjct: 426 YMYPKGLTDLLLIMKEKYGNPPIFITENGIADVEGDPEMPDPLDDWKRLDYLQ 478
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVD 562
+++++A++ A ++ ++ G+ W ++DNFEW GY+ RFG+V++D
Sbjct: 478 QRHISAVKDA-IDQGADVRGHFTWGLIDNFEWGSGYSSRFGLVYID 522
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 922 TEEEINALKGKQKYLTALSKAIGEDKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWL 981
TE I ++G + L D ++++A+ AI + +V G+ W L+DNFEW
Sbjct: 451 TENGIADVEGDPEMPDPLDDWKRLDYLQRHISAVKDAI-DQGADVRGHFTWGLIDNFEWG 509
Query: 982 CGYT 985
GY+
Sbjct: 510 SGYS 513
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 276 bits (706), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 167/427 (39%), Positives = 238/427 (55%), Gaps = 52/427 (12%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
FP F +G +T+A+Q+EGAWNEDGKGE+ WDH H P+ + D N+D+ +SYH YK D
Sbjct: 24 FPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNSDIGANSYHMYKTD 83
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGDTD-RINEKGVQYYRNLINEVLSKNIQPMVTLNHY 156
V L++++G YRFS+SW RILP G + IN G++YYRNLIN +L I+P VT+ H+
Sbjct: 84 VRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHW 143
Query: 157 DLPQPLQE-FGGWAN----PVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYK 211
D+PQ L+E +GG+ + +V DY FA V F FGDKV W+T N+P + Y
Sbjct: 144 DVPQALEEKYGGFLDKSHKSIVEDY-TYFAKVCFDNFGDKVKNWLTFNDP-QTFTSFSYG 201
Query: 212 SG-------APYLNLSGLGGDYLV-----AHNLLRAHAKAYRLYEKKYKSLQKGKVSITL 259
+G +P L+ + G+ LV HN+L AHA+A LY K YK ++ +
Sbjct: 202 TGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKR-DDTRIGLAF 260
Query: 260 DSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRAR 319
D P+ TS D++A ER + LG F P+ GDYP +R + AR
Sbjct: 261 DVMGRVPY-GTSFLDKQAEERSWDINLGWFLEPVVR--GDYPFSMRSL----------AR 307
Query: 320 SRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPS 379
RLP F +E+ + L GS++ LN+YTS N + + N P +N A SQ+ N P
Sbjct: 308 ERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSP-VLNTDDAYASQEVNGPD 366
Query: 380 S-------NSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD----------DGRLD 422
+PW+ + P+G + LL +K +Y NPP++ITENG D + L+
Sbjct: 367 GKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALN 426
Query: 423 DEGRIDY 429
D R+DY
Sbjct: 427 DYKRLDY 433
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 135/314 (42%), Gaps = 76/314 (24%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKGE+ WD H +P ++D N D+ +SYH YK DV ++K++G YRFS+SW RILP
Sbjct: 47 GKGESNWDHFCHNHPERILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILP 106
Query: 747 TGDID-KINEKGVQYYRNLIDELLLNNIQPMVKL--WITIKETLEAMQGY---------- 793
G + IN G++YYRNLI+ LL N I+P V + W + E G+
Sbjct: 107 KGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVE 166
Query: 794 ------------------------DFKTYAPYLSMTGVGG-------------------- 809
D +T+ + TGV
Sbjct: 167 DYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLVE 226
Query: 810 EYLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQF 869
Y A HN+L +HA+A LY K YK ++ L + P +S D++A ER
Sbjct: 227 PYTAGHNILLAHAEAVDLYNKHYK-RDDTRIGLAFDVMGRVPYG-TSFLDKQAEERSWDI 284
Query: 870 KFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTEEEINAL 929
G F P+ GDYP +R + AR RLP F +E+ + L G +
Sbjct: 285 NLGWFLEPVVR--GDYPFSMRSL----------ARERLPFFKDEQKEKLAGSYN-----M 327
Query: 930 KGKQKYLTALSKAI 943
G Y + SK I
Sbjct: 328 LGLNYYTSRFSKNI 341
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 12/109 (11%)
Query: 415 FSDDGRLDDEGRIDYYAFQVYRFSLSWSRILPTGDIDK-INEKGVQYYRNLIDELLLNNI 473
+ D RL E +D YRFS+SW RILP G + IN G++YYRNLI+ LL N I
Sbjct: 80 YKTDVRLLKEMGMD-----AYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGI 134
Query: 474 QPMVTLYHWDLPQPLQD-FGGWTN----AIIADYFETYADFAYKTFGDK 517
+P VT++HWD+PQ L++ +GG+ + +I+ DY +A + FGDK
Sbjct: 135 EPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDY-TYFAKVCFDNFGDK 182
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 19/116 (16%)
Query: 563 FSSSFDYFGLNHYTSFLVSKKTEPSPEPS-FRNDANVVLSDDRKWPKGASF-------WL 614
+ S++ GLN+YTS SK + SP S N + S + P G W+
Sbjct: 321 LAGSYNMLGLNYYTSRF-SKNIDISPNYSPVLNTDDAYASQEVNGPDGKPIGPPMGNPWI 379
Query: 615 KVVPDGFRALLNWIKKEYNNPPVFITENGFSD----------DGQLDDQGRVDFYQ 660
+ P+G + LL +K +Y NPP++ITENG D + L+D R+D+ Q
Sbjct: 380 YMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQ 435
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 522 AMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVD 562
A K ++ N+ GY AWS+LDNFEW G+T R+GIV+VD
Sbjct: 439 ATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 479
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 922 TEEEINALKGKQKYL---TALSKAIGEDKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNF 978
TE I + K+ L AL+ D +++ L ++I + NV GY AWSLLDNF
Sbjct: 405 TENGIGDVDTKETPLPMEAALNDYKRLDYIQRHIATLKESI-DLGSNVQGYFAWSLLDNF 463
Query: 979 EWLCGYT 985
EW G+T
Sbjct: 464 EWFAGFT 470
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/426 (39%), Positives = 233/426 (54%), Gaps = 50/426 (11%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
FP F +G +T+A+Q+EGAWNEDGKGE+ WDH H P+ + D N+D+ +SYH YK D
Sbjct: 24 FPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNSDIGANSYHMYKTD 83
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGDTD-RINEKGVQYYRNLINEVLSKNIQPMVTLNHY 156
V L++++G YRFS+SW RILP G + IN G++YYRNLIN +L I+P VT+ H+
Sbjct: 84 VRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHW 143
Query: 157 DLPQPLQE-FGGWAN----PVVADYFESFADVAFKTFGDKVPYWITINEPLDVMG-GYGY 210
D+PQ L+E +GG+ + +V DY FA V F FGDKV W+T N+P YG
Sbjct: 144 DVPQALEEKYGGFLDKSHKSIVEDY-TYFAKVCFDNFGDKVKNWLTFNDPQTFTSVSYGT 202
Query: 211 KSGAP----------YLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLD 260
AP Y + L Y HN+L AHA+A LY K YK ++ + D
Sbjct: 203 GVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKR-DDTRIGLAFD 261
Query: 261 SCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARS 320
P+ TS D++A ER + LG F P+ GDYP +R + AR
Sbjct: 262 VMGRVPY-GTSFLDKQAEERSWDINLGWFLEPVVR--GDYPFSMRSL----------ARE 308
Query: 321 RLPRFTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSS 380
RLP F +E+ + L GS++ LN+YTS N + + N P +N A SQ+ N P
Sbjct: 309 RLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSP-VLNTDDAYASQEVNGPDG 367
Query: 381 -------NSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD----------DGRLDD 423
+PW+ + P+G + LL +K +Y NPP++ITENG D + L+D
Sbjct: 368 KPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALND 427
Query: 424 EGRIDY 429
R+DY
Sbjct: 428 YKRLDY 433
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 135/315 (42%), Gaps = 78/315 (24%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKGE+ WD H +P ++D N D+ +SYH YK DV ++K++G YRFS+SW RILP
Sbjct: 47 GKGESNWDHFCHNHPERILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILP 106
Query: 747 TGDID-KINEKGVQYYRNLIDELLLNNIQPMVKL-------------------------- 779
G + IN G++YYRNLI+ LL N I+P V +
Sbjct: 107 KGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVE 166
Query: 780 -------------------WITIK--ETLEAMQGYDFKTYAPYLSMTGVGGEY------- 811
W+T +T ++ Y +AP G+ Y
Sbjct: 167 DYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSVS-YGTGVFAPGRCSPGLDCAYPTGNSLV 225
Query: 812 ---LAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQ 868
A HN+L +HA+A LY K YK ++ L + P +S D++A ER
Sbjct: 226 EPYTAGHNILLAHAEAVDLYNKHYK-RDDTRIGLAFDVMGRVPYG-TSFLDKQAEERSWD 283
Query: 869 FKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTEEEINA 928
G F P+ GDYP +R + AR RLP F +E+ + L G
Sbjct: 284 INLGWFLEPVVR--GDYPFSMRSL----------ARERLPFFKDEQKEKLAGSYN----- 326
Query: 929 LKGKQKYLTALSKAI 943
+ G Y + SK I
Sbjct: 327 MLGLNYYTSRFSKNI 341
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 12/109 (11%)
Query: 415 FSDDGRLDDEGRIDYYAFQVYRFSLSWSRILPTGDIDK-INEKGVQYYRNLIDELLLNNI 473
+ D RL E +D YRFS+SW RILP G + IN G++YYRNLI+ LL N I
Sbjct: 80 YKTDVRLLKEMGMD-----AYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGI 134
Query: 474 QPMVTLYHWDLPQPLQD-FGGWTN----AIIADYFETYADFAYKTFGDK 517
+P VT++HWD+PQ L++ +GG+ + +I+ DY +A + FGDK
Sbjct: 135 EPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDY-TYFAKVCFDNFGDK 182
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 19/116 (16%)
Query: 563 FSSSFDYFGLNHYTSFLVSKKTEPSPEPS-FRNDANVVLSDDRKWPKGASF-------WL 614
+ S++ GLN+YTS SK + SP S N + S + P G W+
Sbjct: 321 LAGSYNMLGLNYYTSRF-SKNIDISPNYSPVLNTDDAYASQEVNGPDGKPIGPPMGNPWI 379
Query: 615 KVVPDGFRALLNWIKKEYNNPPVFITENGFSD----------DGQLDDQGRVDFYQ 660
+ P+G + LL +K +Y NPP++ITENG D + L+D R+D+ Q
Sbjct: 380 YMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQ 435
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 522 AMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVD 562
A K ++ N+ GY AWS+LDNFEW G+T R+GIV+VD
Sbjct: 439 ATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 479
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 922 TEEEINALKGKQKYL---TALSKAIGEDKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNF 978
TE I + K+ L AL+ D +++ L ++I + NV GY AWSLLDNF
Sbjct: 405 TENGIGDVDTKETPLPMEAALNDYKRLDYIQRHIATLKESI-DLGSNVQGYFAWSLLDNF 463
Query: 979 EWLCGYT 985
EW G+T
Sbjct: 464 EWFAGFT 470
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 269 bits (688), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 162/409 (39%), Positives = 236/409 (57%), Gaps = 29/409 (7%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
M+ + P F+WG +TAA+Q+EG+ ++DG+ +IWD P + D + DVA DSY+
Sbjct: 4 MSAAKLPKSFVWGYATAAYQIEGSPDKDGREPSIWDTFCKA-PGKIADGSSGDVATDSYN 62
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGD-TDRINEKGVQYYRNLINEVLSKNIQPMV 151
+++EDV L++ G + YRFSLSWSRI+P G +D +N G+++YR LI E++ + I P V
Sbjct: 63 RWREDVQLLKSYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFV 122
Query: 152 TLNHYDLPQPLQE-FGGWANPVVA-DYFESFADVAFKTFGDKVPYWITINEPLDVMGGYG 209
TL H+DLPQ L + +GGW N A F ++A + F++FGD V WIT NEP V+ G
Sbjct: 123 TLYHWDLPQALDDRYGGWLNKEEAIQDFTNYAKLCFESFGDLVQNWITFNEPW-VISVMG 181
Query: 210 YKSGAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNA 269
Y +G ++V+H+++ AHA A +LY ++K Q G++ ITLDS P++
Sbjct: 182 YGNGIFAPGHVSNTEPWIVSHHIILAHAHAVKLYRDEFKEKQGGQIGITLDSHWLIPYDD 241
Query: 270 TSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEE 329
T +EA R +F LG FA+PIY G+YPP +++I+ RLP FT EE
Sbjct: 242 TDAS-KEATLRAMEFKLGRFANPIYK--GEYPPRIKKILG----------DRLPEFTPEE 288
Query: 330 IKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVP 389
I+ +KGS DFF LN YT+ L+ + A A +Q S+ WL+
Sbjct: 289 IELVKGSSDFFGLNTYTTHLVQDGGSDELAGFVKTGHTRADGTQLGT--QSDMGWLQTYG 346
Query: 390 DGFRALLNWIKKEYNNPPVFITENGFSDDGR--------LDDEGRIDYY 430
GFR LLN++ K Y+ PV++TENGF G +DD R YY
Sbjct: 347 PGFRWLLNYLWKAYDK-PVYVTENGFPVKGENDLPVEQAVDDTDRQAYY 394
Score = 152 bits (384), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 164/318 (51%), Gaps = 63/318 (19%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+ +IWD P + D +GDVA DSY++++EDV ++K G + YRFSLSWSRI+P
Sbjct: 32 GREPSIWDTFCKA-PGKIADGSSGDVATDSYNRWREDVQLLKSYGVKAYRFSLSWSRIIP 90
Query: 747 TGD-IDKINEKGVQYYRNLIDELLLNNIQPMVKL---------------WITIKETLEAM 790
G D +N G+++YR LI+EL+ I P V L W+ +E ++
Sbjct: 91 KGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHWDLPQALDDRYGGWLNKEEAIQDF 150
Query: 791 QGYD---FKTYA-----------PY-LSMTGVGG------------EYLAAHNLLRSHAK 823
Y F+++ P+ +S+ G G ++ +H+++ +HA
Sbjct: 151 TNYAKLCFESFGDLVQNWITFNEPWVISVMGYGNGIFAPGHVSNTEPWIVSHHIILAHAH 210
Query: 824 AYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAG 883
A +LY ++K Q G++ +TL++H+ P D + +EA R ++FK G FA+PIY G
Sbjct: 211 AVKLYRDEFKEKQGGQIGITLDSHWLIPYD-DTDASKEATLRAMEFKLGRFANPIYK--G 267
Query: 884 DYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTEEEINALKGKQKYLTALSKAI 943
+YPP +++I+ RLP FT EEI+ +KG ++ G Y T L +
Sbjct: 268 EYPPRIKKILG----------DRLPEFTPEEIELVKGSSD-----FFGLNTYTTHLVQDG 312
Query: 944 GEDKCNKYL-TALSKAIG 960
G D+ ++ T ++A G
Sbjct: 313 GSDELAGFVKTGHTRADG 330
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 5/91 (5%)
Query: 430 YAFQVYRFSLSWSRILPTGD-IDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPL 488
Y + YRFSLSWSRI+P G D +N G+++YR LI+EL+ I P VTLYHWDLPQ L
Sbjct: 74 YGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHWDLPQAL 133
Query: 489 QD-FGGWTN--AIIADYFETYADFAYKTFGD 516
D +GGW N I D F YA +++FGD
Sbjct: 134 DDRYGGWLNKEEAIQD-FTNYAKLCFESFGD 163
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ Y A+ +A+ D ++ GY WS+LDNFEW +GY RFG+ HVD+ +
Sbjct: 395 RDYTEALLQAVTEDGADVRGYFGWSLLDNFEWAEGYKVRFGVTHVDYET 443
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 565 SSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRAL 624
S D+FGLN YT+ LV + F + + + WL+ GFR L
Sbjct: 294 GSSDFFGLNTYTTHLV-QDGGSDELAGFVKTGHTRADGTQLGTQSDMGWLQTYGPGFRWL 352
Query: 625 LNWIKKEYNNPPVFITENGFSDDGQ--------LDDQGRVDFYQ 660
LN++ K Y+ PV++TENGF G+ +DD R +Y+
Sbjct: 353 LNYLWKAYDK-PVYVTENGFPVKGENDLPVEQAVDDTDRQAYYR 395
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 951 YLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGY 984
Y AL +A+ ED +V GY WSLLDNFEW GY
Sbjct: 397 YTEALLQAVTEDGADVRGYFGWSLLDNFEWAEGY 430
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 241/427 (56%), Gaps = 50/427 (11%)
Query: 28 NLGTQMNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVA 87
N T++++ FP F+ G ++A+Q+EG + G+G +IWD H +PD+++ N DVA
Sbjct: 12 NDATRISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVA 71
Query: 88 CDSYHKYKEDVALIRDIGFQVYRFSLSWSRILPTGD-TDRINEKGVQYYRNLINEVLSKN 146
DSYH YKEDV +++++G YRFS+SWSR+LP G + +N++G+ YY NLI+ +L+
Sbjct: 72 VDSYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANG 131
Query: 147 IQPMVTLNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVM 205
I+P VTL H+D+PQ L+ E+GG+ +P + D F +A++ F FGD+V +W+T+NEP
Sbjct: 132 IKPFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPW-TF 190
Query: 206 GGYGYKSG--------------------------APYLNLS-GLGGD--YLVAHNLLRAH 236
+GY +G AP S G G Y V H+LL AH
Sbjct: 191 SVHGYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAH 250
Query: 237 AKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSE 296
A A LY+ K++ Q+G++ I+ + P + S D EAA R F LG F PI S
Sbjct: 251 AAAVELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITS- 309
Query: 297 AGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNHT 356
GDYP +++ V SRLP+F+ E+ K LKGS+DF LN+YT+ + N +
Sbjct: 310 -GDYPKSMKKFVG----------SRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTN 358
Query: 357 SNAPP--STINDRAATFSQD----PNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFI 410
S+ S D T+ D P P S S WL + P+G R +L + KK YN P +++
Sbjct: 359 SSGSNNFSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYV 418
Query: 411 TENGFSD 417
TENG D
Sbjct: 419 TENGVDD 425
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 141/305 (46%), Gaps = 83/305 (27%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+G +IWD H P + NGDVA DSYH YKEDV I+K+LG YRFS+SWSR+LP
Sbjct: 45 GRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYHLYKEDVNILKNLGLDAYRFSISWSRVLP 104
Query: 747 TGDID-KINEKGVQYYRNLIDELLLNNIQPMVKL-------------------------- 779
G + +N++G+ YY NLID LL N I+P V L
Sbjct: 105 GGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVPQALEDEYGGFLSPRIVDDFC 164
Query: 780 ----------------WITIKETLE-AMQGYDFKTYAP---------------------- 800
W+T+ E ++ GY YAP
Sbjct: 165 EYAELCFWEFGDRVKHWMTLNEPWTFSVHGYATGLYAPGRGRTSPEHVNHPTVQHRCSTV 224
Query: 801 ---YLSMTGVGGE--YLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPS 855
+ TG G Y H+LL +HA A LY+ K++ Q+G++ ++ T + P D +
Sbjct: 225 APQCICSTGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEPWDEN 284
Query: 856 SKEDQEAAERYIQFKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEI 915
S D EAA R + F G F PI S GDYP +++ V SRLP+F+ E+
Sbjct: 285 SASDVEAAARALDFMLGWFMEPITS--GDYPKSMKKFVG----------SRLPKFSPEQS 332
Query: 916 KALKG 920
K LKG
Sbjct: 333 KMLKG 337
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 431 AFQVYRFSLSWSRILPTGDIDK-INEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQ 489
YRFS+SWSR+LP G + +N++G+ YY NLID LL N I+P VTL+HWD+PQ L+
Sbjct: 89 GLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVPQALE 148
Query: 490 D-FGGWTNAIIADYFETYADFAYKTFGDK 517
D +GG+ + I D F YA+ + FGD+
Sbjct: 149 DEYGGFLSPRIVDDFCEYAELCFWEFGDR 177
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 525 KALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSFDYFGLNH----YTSFLV 580
+ +ND N+ GY AWS+LDNFEW +GY RFGI+H+D++ +F + + SF
Sbjct: 454 RQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNFARYPKDSAVWLMNSFHK 513
Query: 581 SKKTEPSPEPSFRNDANVVLSDDR 604
+ P+ + S R D +S R
Sbjct: 514 NISKLPAVKRSIREDDEEQVSSKR 537
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 563 FSSSFDYFGLNHYTSFLV---SKKTEPSPEPSFRNDANVVLSDDRKW----PKGASFWLK 615
S+D+ GLN+YT+ V S + S S+ D +V DR P+ S WL
Sbjct: 335 LKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYETDRNGVPIGPQSGSDWLL 394
Query: 616 VVPDGFRALLNWIKKEYNNPPVFITENGFSD 646
+ P+G R +L + KK YN P +++TENG D
Sbjct: 395 IYPEGIRKILVYTKKTYNVPLIYVTENGVDD 425
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 17/23 (73%)
Query: 962 DKCNVIGYTAWSLLDNFEWLCGY 984
D NV GY AWSLLDNFEW GY
Sbjct: 459 DGVNVKGYFAWSLLDNFEWGEGY 481
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
Length = 513
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 241/427 (56%), Gaps = 50/427 (11%)
Query: 28 NLGTQMNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVA 87
N T++++ FP F+ G ++A+Q+EG + G+G +IWD H +PD+++ N DVA
Sbjct: 12 NDATRISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVA 71
Query: 88 CDSYHKYKEDVALIRDIGFQVYRFSLSWSRILPTGD-TDRINEKGVQYYRNLINEVLSKN 146
DSYH YKEDV +++++G YRFS+SWSR+LP G + +N++G+ YY NLI+ +L+
Sbjct: 72 VDSYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANG 131
Query: 147 IQPMVTLNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVM 205
I+P VTL H+D+PQ L+ E+GG+ +P + D F +A++ F FGD+V +W+T+NEP
Sbjct: 132 IKPFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPW-TF 190
Query: 206 GGYGYKSG--------------------------APYLNLS-GLGGD--YLVAHNLLRAH 236
+GY +G AP S G G Y V H+LL AH
Sbjct: 191 SVHGYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAH 250
Query: 237 AKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSE 296
A A LY+ K++ Q+G++ I+ + P + S D EAA R F LG F PI S
Sbjct: 251 AAAVELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITS- 309
Query: 297 AGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNHT 356
GDYP +++ V SRLP+F+ E+ K LKGS+DF LN+YT+ + N +
Sbjct: 310 -GDYPKSMKKFVG----------SRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTN 358
Query: 357 SNAPP--STINDRAATFSQD----PNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFI 410
S+ S D T+ D P P S S WL + P+G R +L + KK YN P +++
Sbjct: 359 SSGSNNFSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYV 418
Query: 411 TENGFSD 417
TENG D
Sbjct: 419 TENGVDD 425
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 141/306 (46%), Gaps = 83/306 (27%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+G +IWD H P + NGDVA DSYH YKEDV I+K+LG YRFS+SWSR+LP
Sbjct: 45 GRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYHLYKEDVNILKNLGLDAYRFSISWSRVLP 104
Query: 747 TGDID-KINEKGVQYYRNLIDELLLNNIQPMVKL-------------------------- 779
G + +N++G+ YY NLID LL N I+P V L
Sbjct: 105 GGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVPQALEDEYGGFLSPRIVDDFC 164
Query: 780 ----------------WITIKETLE-AMQGYDFKTYAP---------------------- 800
W+T+ E ++ GY YAP
Sbjct: 165 EYAELCFWEFGDRVKHWMTLNEPWTFSVHGYATGLYAPGRGRTSPEHVNHPTVQHRCSTV 224
Query: 801 ---YLSMTGVGGE--YLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPS 855
+ TG G Y H+LL +HA A LY+ K++ Q+G++ ++ T + P D +
Sbjct: 225 APQCICSTGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEPWDEN 284
Query: 856 SKEDQEAAERYIQFKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEI 915
S D EAA R + F G F PI S GDYP +++ V SRLP+F+ E+
Sbjct: 285 SASDVEAAARALDFMLGWFMEPITS--GDYPKSMKKFVG----------SRLPKFSPEQS 332
Query: 916 KALKGK 921
K LKG
Sbjct: 333 KMLKGS 338
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 431 AFQVYRFSLSWSRILPTGDIDK-INEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQ 489
YRFS+SWSR+LP G + +N++G+ YY NLID LL N I+P VTL+HWD+PQ L+
Sbjct: 89 GLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVPQALE 148
Query: 490 D-FGGWTNAIIADYFETYADFAYKTFGDK 517
D +GG+ + I D F YA+ + FGD+
Sbjct: 149 DEYGGFLSPRIVDDFCEYAELCFWEFGDR 177
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 525 KALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSF 567
+ +ND N+ GY AWS+LDNFEW +GY RFGI+H+D++ +F
Sbjct: 454 RQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNF 496
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 563 FSSSFDYFGLNHYTSFLV---SKKTEPSPEPSFRNDANVVLSDDRKW----PKGASFWLK 615
S+D+ GLN+YT+ V S + S S+ D +V DR P+ S WL
Sbjct: 335 LKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYETDRNGVPIGPQSGSDWLL 394
Query: 616 VVPDGFRALLNWIKKEYNNPPVFITENGFSD 646
+ P+G R +L + KK YN P +++TENG D
Sbjct: 395 IYPEGIRKILVYTKKTYNVPLIYVTENGVDD 425
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 17/23 (73%)
Query: 962 DKCNVIGYTAWSLLDNFEWLCGY 984
D NV GY AWSLLDNFEW GY
Sbjct: 459 DGVNVKGYFAWSLLDNFEWGEGY 481
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 162/427 (37%), Positives = 241/427 (56%), Gaps = 50/427 (11%)
Query: 28 NLGTQMNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVA 87
N T++++ FP F+ G ++A+Q+EG + G+G +IWD H +PD+++ N DVA
Sbjct: 12 NDATRISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVA 71
Query: 88 CDSYHKYKEDVALIRDIGFQVYRFSLSWSRILPTGD-TDRINEKGVQYYRNLINEVLSKN 146
DSYH YKEDV +++++G YRFS+SWSR+LP G + +N++G+ YY NLI+ +L+
Sbjct: 72 VDSYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANG 131
Query: 147 IQPMVTLNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVM 205
I+P VTL H+D+PQ L+ E+GG+ +P + D F +A++ F FGD+V +W+T+N+P
Sbjct: 132 IKPFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNQPW-TF 190
Query: 206 GGYGYKSG--------------------------APYLNLS-GLGGD--YLVAHNLLRAH 236
+GY +G AP S G G Y V H+LL AH
Sbjct: 191 SVHGYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAH 250
Query: 237 AKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSE 296
A A LY+ K++ Q+G++ I+ + P + S D EAA R F LG F PI S
Sbjct: 251 AAAVELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITS- 309
Query: 297 AGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNHT 356
GDYP +++ V SRLP+F+ E+ K LKGS+DF LN+YT+ + N +
Sbjct: 310 -GDYPKSMKKFVG----------SRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTN 358
Query: 357 SNAPP--STINDRAATFSQD----PNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFI 410
S+ S D T+ D P P S S WL + P+G R +L + KK YN P +++
Sbjct: 359 SSGSNNFSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYV 418
Query: 411 TENGFSD 417
TENG D
Sbjct: 419 TENGVDD 425
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 141/306 (46%), Gaps = 83/306 (27%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+G +IWD H P + NGDVA DSYH YKEDV I+K+LG YRFS+SWSR+LP
Sbjct: 45 GRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYHLYKEDVNILKNLGLDAYRFSISWSRVLP 104
Query: 747 TGDIDK-INEKGVQYYRNLIDELLLNNIQPM----------------------------- 776
G + +N++G+ YY NLID LL N I+P
Sbjct: 105 GGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVPQALEDEYGGFLSPRIVDDFC 164
Query: 777 -------------VKLWITIKETLE-AMQGYDFKTYAP---------------------- 800
VK W+T+ + ++ GY YAP
Sbjct: 165 EYAELCFWEFGDRVKHWMTLNQPWTFSVHGYATGLYAPGRGRTSPEHVNHPTVQHRCSTV 224
Query: 801 ---YLSMTGVGGE--YLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPS 855
+ TG G Y H+LL +HA A LY+ K++ Q+G++ ++ T + P D +
Sbjct: 225 APQCICSTGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEPWDEN 284
Query: 856 SKEDQEAAERYIQFKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEI 915
S D EAA R + F G F PI S GDYP +++ V SRLP+F+ E+
Sbjct: 285 SASDVEAAARALDFMLGWFMEPITS--GDYPKSMKKFVG----------SRLPKFSPEQS 332
Query: 916 KALKGK 921
K LKG
Sbjct: 333 KMLKGS 338
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 431 AFQVYRFSLSWSRILPTGDIDK-INEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQ 489
YRFS+SWSR+LP G + +N++G+ YY NLID LL N I+P VTL+HWD+PQ L+
Sbjct: 89 GLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVPQALE 148
Query: 490 D-FGGWTNAIIADYFETYADFAYKTFGDK 517
D +GG+ + I D F YA+ + FGD+
Sbjct: 149 DEYGGFLSPRIVDDFCEYAELCFWEFGDR 177
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 525 KALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSF 567
+ +ND N+ GY AWS+LDNFEW +GY RFGI+H+D++ +F
Sbjct: 454 RQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNF 496
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 563 FSSSFDYFGLNHYTSFLV---SKKTEPSPEPSFRNDANVVLSDDRKW----PKGASFWLK 615
S+D+ GLN+YT+ V S + S S+ D +V DR P+ S WL
Sbjct: 335 LKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYETDRNGVPIGPQSGSDWLL 394
Query: 616 VVPDGFRALLNWIKKEYNNPPVFITENGFSD 646
+ P+G R +L + KK YN P +++TENG D
Sbjct: 395 IYPEGIRKILVYTKKTYNVPLIYVTENGVDD 425
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 17/23 (73%)
Query: 962 DKCNVIGYTAWSLLDNFEWLCGY 984
D NV GY AWSLLDNFEW GY
Sbjct: 459 DGVNVKGYFAWSLLDNFEWGEGY 481
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 263 bits (671), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 155/404 (38%), Positives = 226/404 (55%), Gaps = 36/404 (8%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
M K +FP F++G +TAA+Q+EGA+ ED KGE+IWD H P V N D+ACD YH
Sbjct: 1 MEKLRFPKDFIFGTATAAYQIEGAYKEDEKGESIWDRFSHI-PGNVAKMHNGDIACDHYH 59
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
+YKEDV L++ +G + YRFS++W RI P G IN+KG+Q+YR+LI+E++ +I+P +T
Sbjct: 60 RYKEDVQLLKSLGIKSYRFSIAWPRIFPKG-FGEINQKGIQFYRDLIDELIKNDIEPAIT 118
Query: 153 LNHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKS 212
+ H+DLPQ LQ+ GGWANP VADY+ +A++ F+ FGD+V WIT NEP V GY
Sbjct: 119 IYHWDLPQKLQDIGGWANPQVADYYVDYANLLFREFGDRVKTWITHNEPW-VASYLGYAL 177
Query: 213 GAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSL-QKGKVSITLDSCNYYPHNATS 271
G + + L AHN+L +H KA K Y+ L Q G++ ITL+ Y N+
Sbjct: 178 GVHAPGIKDMKMALLAAHNILLSHFKAV----KAYRELEQDGQIGITLNLSTCYS-NSAD 232
Query: 272 KEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIK 331
+ED AA R + F + G YP + +I + +P +E
Sbjct: 233 EEDIAAAHRSDGWNNRWFLDA--ALKGTYPEDMIKIFSDTNI--------MPELPKELFT 282
Query: 332 ALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDG 391
+ + DF +N+YT ++ NN+ S D P + W ++ P G
Sbjct: 283 EVFETSDFLGINYYTRQVVKNNSEAFIGAESVAMDN----------PKTEMGW-EIYPQG 331
Query: 392 FRALLNWIKKEYNNPPVFITENG--FSD----DGRLDDEGRIDY 429
LL I ++Y N ++ITENG F+D DG+++DE R+DY
Sbjct: 332 LYDLLTRIHRDYGNIDLYITENGAAFNDMVNRDGKVEDENRLDY 375
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 114/229 (49%), Gaps = 50/229 (21%)
Query: 679 VPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFS 738
+ Y KGE+IWDR H P V NGD+ACD YH+YKEDV ++K LG + YRFS
Sbjct: 21 IEGAYKEDEKGESIWDRFSHI-PGNVAKMHNGDIACDHYHRYKEDVQLLKSLGIKSYRFS 79
Query: 739 LSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPM---------------------- 776
++W RI P G +IN+KG+Q+YR+LIDEL+ N+I+P
Sbjct: 80 IAWPRIFPKG-FGEINQKGIQFYRDLIDELIKNDIEPAITIYHWDLPQKLQDIGGWANPQ 138
Query: 777 -------------------VKLWITIKET-LEAMQGYDFKTYAPYLSMTGVGGEYLAAHN 816
VK WIT E + + GY +AP + + LAAHN
Sbjct: 139 VADYYVDYANLLFREFGDRVKTWITHNEPWVASYLGYALGVHAP--GIKDMKMALLAAHN 196
Query: 817 LLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAER 865
+L SH KA + Y + Q G++ +TLN Y + + +ED AA R
Sbjct: 197 ILLSHFKAVKAYR---ELEQDGQIGITLNLSTCYS-NSADEEDIAAAHR 241
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
+ YRFS++W RI P G +IN+KG+Q+YR+LIDEL+ N+I+P +T+YHWDLPQ LQD
Sbjct: 72 GIKSYRFSIAWPRIFPKG-FGEINQKGIQFYRDLIDELIKNDIEPAITIYHWDLPQKLQD 130
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
GGW N +ADY+ YA+ ++ FGD+
Sbjct: 131 IGGWANPQVADYYVDYANLLFREFGDR 157
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 536 GYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
GY WS +DNFEW +GY RFGIVHV++ +
Sbjct: 395 GYYIWSFMDNFEWAEGYEKRFGIVHVNYKT 424
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 16/97 (16%)
Query: 568 DYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRALLNW 627
D+ G+N+YT +V +E +F +V + + PK W ++ P G LL
Sbjct: 289 DFLGINYYTRQVVKNNSE-----AFIGAESVAMDN----PKTEMGW-EIYPQGLYDLLTR 338
Query: 628 IKKEYNNPPVFITENG--FSD----DGQLDDQGRVDF 658
I ++Y N ++ITENG F+D DG+++D+ R+D+
Sbjct: 339 IHRDYGNIDLYITENGAAFNDMVNRDGKVEDENRLDY 375
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 941 KAIGEDKCNKYLTALSKAIGEDKCNV--IGYTAWSLLDNFEWLCGY 984
K E++ + T + A+ + V GY WS +DNFEW GY
Sbjct: 366 KVEDENRLDYLYTHFAAALSAIEAGVPLKGYYIWSFMDNFEWAEGY 411
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/410 (38%), Positives = 237/410 (57%), Gaps = 41/410 (10%)
Query: 30 GTQM--NKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVA 87
G+ M N +FP GFLWG +TA++Q+EG+ DG G +IW HT P VK+ DVA
Sbjct: 18 GSHMASNVKKFPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHT-PGNVKNGDTGDVA 76
Query: 88 CDSYHKYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNI 147
CD Y+++KED+ +I +G + YRFS+SW RILP G T R+N+KG+ +Y +I+ +L K I
Sbjct: 77 CDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPEG-TGRVNQKGLDFYNRIIDTLLEKGI 135
Query: 148 QPMVTLNHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MG 206
P VT+ H+DLP LQ GGWAN +AD+F ++ V F+ FGD+V WIT+NEP V +
Sbjct: 136 TPFVTIYHWDLPFALQLKGGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAIV 195
Query: 207 GYGYKSGAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYP 266
G+ Y AP + + + HNLLRAHA+A +++ ++++ GK+ I ++ Y+
Sbjct: 196 GHLYGVHAP--GMRDIYVAFRAVHNLLRAHARAVKVFR---ETVKDGKIGIVFNN-GYFE 249
Query: 267 HNATSKEDQEAAERVFQF-TLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRF 325
+ +ED A + QF LF +PIY GDYP +V + AR LP
Sbjct: 250 PASEKEEDIRAVRFMHQFNNYPLFLNPIYR--GDYPELVLEF----------AREYLPEN 297
Query: 326 TEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWL 385
++++ ++ DF LN+Y+ L+ +AP A + + P + W
Sbjct: 298 YKDDMSEIQEKIDFVGLNYYSGHLV---KFDPDAP-------AKVSFVERDLPKTAMGW- 346
Query: 386 KVVPDGFRALLNWIKKEYNNPPVFITENG------FSDDGRLDDEGRIDY 429
++VP+G +L +K+EYN P V+ITENG S+DGR+ D+ RIDY
Sbjct: 347 EIVPEGIYWILKKVKEEYNPPEVYITENGAAFDDVVSEDGRVHDQNRIDY 396
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 176/416 (42%), Gaps = 114/416 (27%)
Query: 669 FWFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIK 728
W + + + + G G +IW HT P V + GDVACD Y+++KED+ II+
Sbjct: 33 LWGVATASYQIEGSPLADGAGMSIWHTFSHT-PGNVKNGDTGDVACDHYNRWKEDIEIIE 91
Query: 729 DLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL--------- 779
LG + YRFS+SW RILP G ++N+KG+ +Y +ID LL I P V +
Sbjct: 92 KLGVKAYRFSISWPRILPEG-TGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFAL 150
Query: 780 --------------------------------WITIKET-LEAMQGYDFKTYAPYLSMTG 806
WIT+ E + A+ G+ + +AP M
Sbjct: 151 QLKGGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAIVGHLYGVHAP--GMRD 208
Query: 807 VGGEYLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERY 866
+ + A HNLLR+HA+A +++ + K GK+ + N + P S KE+ A R+
Sbjct: 209 IYVAFRAVHNLLRAHARAVKVFRETVK---DGKIGIVFNNGYFEP--ASEKEEDIRAVRF 263
Query: 867 I-QF-KFGLFAHPIYSQAGDYPPIV----RQIVDQN------------------------ 896
+ QF + LF +PIY GDYP +V R+ + +N
Sbjct: 264 MHQFNNYPLFLNPIYR--GDYPELVLEFAREYLPENYKDDMSEIQEKIDFVGLNYYSGHL 321
Query: 897 -------SAKEGRARSRLPR------FTEEEIKALKGKTEEEINALKGKQKYLT----AL 939
AK LP+ E I + K +EE N + Y+T A
Sbjct: 322 VKFDPDAPAKVSFVERDLPKTAMGWEIVPEGIYWILKKVKEEYNP---PEVYITENGAAF 378
Query: 940 SKAIGEDK----------CNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
+ ED ++ KAI ++ + GY WSLLDNFEW GY+
Sbjct: 379 DDVVSEDGRVHDQNRIDYLKAHIGQAWKAI-QEGVPLKGYFVWSLLDNFEWAEGYS 433
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 427 IDYYAFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQ 486
I+ + YRFS+SW RILP G ++N+KG+ +Y +ID LL I P VT+YHWDLP
Sbjct: 90 IEKLGVKAYRFSISWPRILPEG-TGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPF 148
Query: 487 PLQDFGGWTNAIIADYFETYADFAYKTFGDK 517
LQ GGW N IAD+F Y+ ++ FGD+
Sbjct: 149 ALQLKGGWANREIADWFAEYSRVLFENFGDR 179
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 35/179 (19%)
Query: 562 DFSSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGF 621
+ D+ GLN+Y+ LV + + SF +R PK A W ++VP+G
Sbjct: 304 EIQEKIDFVGLNYYSGHLVKFDPDAPAKVSFV---------ERDLPKTAMGW-EIVPEGI 353
Query: 622 RALLNWIKKEYNNPPVFITENG------FSDDGQLDDQGRVDFYQGLSVSFPCFWFMVN- 674
+L +K+EYN P V+ITENG S+DG++ DQ R+D+ L W +
Sbjct: 354 YWILKKVKEEYNPPEVYITENGAAFDDVVSEDGRVHDQNRIDY---LKAHIGQAWKAIQE 410
Query: 675 -VPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGF 732
VP KG +W L + A K+ G V D Y I+KD G+
Sbjct: 411 GVPL----------KGYFVWSLLDNFEWAEGYSKRFGIVYVD----YSTQKRIVKDSGY 455
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 528 VNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ + + GY WS+LDNFEW +GY+ RFGIV+VD+S+
Sbjct: 408 IQEGVPLKGYFVWSLLDNFEWAEGYSKRFGIVYVDYST 445
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/437 (37%), Positives = 234/437 (53%), Gaps = 40/437 (9%)
Query: 37 QFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKE 96
P F WG +TAA+Q+EGA ++DG+G +IWD QP + D + ACDSY++ E
Sbjct: 8 MLPKDFQWGFATAAYQIEGAVDQDGRGPSIWDTFC-AQPGKIADGSSGVTACDSYNRTAE 66
Query: 97 DVALIRDIGFQVYRFSLSWSRILPTGDT-DRINEKGVQYYRNLINEVLSKNIQPMVTLNH 155
D+AL++ +G + YRFS+SWSRI+P G D +N+ G+ +Y ++++L I P +TL H
Sbjct: 67 DIALLKSLGAKSYRFSISWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFH 126
Query: 156 YDLPQPL-QEFGGWANPVVADY-FESFADVAFKTFGDKVPYWITINEPL-DVMGGYGYKS 212
+DLP+ L Q +GG N FE++A V F+ KV WIT NEPL + GYG +
Sbjct: 127 WDLPEGLHQRYGGLLNRTEFPLDFENYARVMFRAL-PKVRNWITFNEPLCSAIPGYGSGT 185
Query: 213 GAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQ-KGKVSITLDSCNYYPHNATS 271
AP + V HN+L AH +A + Y +K G++ I L+ YP +A
Sbjct: 186 FAP--GRQSTSEPWTVGHNILVAHGRAVKAYRDDFKPASGDGQIGIVLNGDFTYPWDAAD 243
Query: 272 KEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIK 331
D+EAAER +F FA PIY GDYP +R+ + RLP FT EE
Sbjct: 244 PADKEAAERRLEFFTAWFADPIY--LGDYPASMRKQLGD----------RLPTFTPEERA 291
Query: 332 ALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNW--PSSNSPWLKVVP 389
+ GS DF+ +NHYTS I + + ++A + N ++ N P + SPWL+
Sbjct: 292 LVHGSNDFYGMNHYTSNYIRHRSSPASADDTVGNVDVLFTNKQGNCIGPETQSPWLRPCA 351
Query: 390 DGFRALLNWIKKEYNNPPVFITENGFSDDGR--------LDDEGRIDYYAFQVYRFSLSW 441
GFR L WI K Y PP+++TENG S G L+D+ R+ YY +
Sbjct: 352 AGFRDFLVWISKRYGYPPIYVTENGTSIKGESDLPKEKILEDDFRVKYYN--------EY 403
Query: 442 SRILPTG-DIDKINEKG 457
R + T ++D +N KG
Sbjct: 404 IRAMVTAVELDGVNVKG 420
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 132/282 (46%), Gaps = 60/282 (21%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+G +IWD P + D +G ACDSY++ ED+A++K LG + YRFS+SWSRI+P
Sbjct: 32 GRGPSIWDTFC-AQPGKIADGSSGVTACDSYNRTAEDIALLKSLGAKSYRFSISWSRIIP 90
Query: 747 TGDI-DKINEKGVQYYRNLIDELLLNNIQPMVKL-------------------------- 779
G D +N+ G+ +Y +D+LL I P + L
Sbjct: 91 EGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWDLPEGLHQRYGGLLNRTEFPLDF 150
Query: 780 ----------------WITIKETL-EAMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHA 822
WIT E L A+ GY T+AP T + HN+L +H
Sbjct: 151 ENYARVMFRALPKVRNWITFNEPLCSAIPGYGSGTFAPGRQSTSE--PWTVGHNILVAHG 208
Query: 823 KAYRLYEKKYKP-SQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQ 881
+A + Y +KP S G++ + LN F YP D + D+EAAER ++F FA PIY
Sbjct: 209 RAVKAYRDDFKPASGDGQIGIVLNGDFTYPWDAADPADKEAAERRLEFFTAWFADPIY-- 266
Query: 882 AGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTE 923
GDYP +R+ + RLP FT EE + G +
Sbjct: 267 LGDYPASMRKQLGD----------RLPTFTPEERALVHGSND 298
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 435 YRFSLSWSRILPTGDI-DKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPL-QDFG 492
YRFS+SWSRI+P G D +N+ G+ +Y +D+LL I P +TL+HWDLP+ L Q +G
Sbjct: 79 YRFSISWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWDLPEGLHQRYG 138
Query: 493 GWTNAI-IADYFETYADFAYKTF 514
G N FE YA ++
Sbjct: 139 GLLNRTEFPLDFENYARVMFRAL 161
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Query: 565 SSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRK---WPKGASFWLKVVPDGF 621
S D++G+NHYTS + ++ P+ + +V+ ++ + P+ S WL+ GF
Sbjct: 295 GSNDFYGMNHYTSNYIRHRSSPASADDTVGNVDVLFTNKQGNCIGPETQSPWLRPCAAGF 354
Query: 622 RALLNWIKKEYNNPPVFITENGFSDDGQ--------LDDQGRVDFY 659
R L WI K Y PP+++TENG S G+ L+D RV +Y
Sbjct: 355 RDFLVWISKRYGYPPIYVTENGTSIKGESDLPKEKILEDDFRVKYY 400
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 508 DFAYKTFGDKKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDF 563
DF K + +Y+ AM A+ D N+ GY AWS++DNFEW DGY RFG+ +VD+
Sbjct: 394 DFRVKYY--NEYIRAMVTAVELDGVNVKGYFAWSLMDNFEWADGYVTRFGVTYVDY 447
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
N+Y+ A+ A+ D NV GY AWSL+DNFEW GY
Sbjct: 401 NEYIRAMVTAVELDGVNVKGYFAWSLMDNFEWADGYV 437
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 227/418 (54%), Gaps = 33/418 (7%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
+++ FP F++G +A+Q EGA+NE +G +IWD P + D N + A + YH
Sbjct: 38 VHRRDFPQDFIFGAGGSAYQCEGAYNEGNRGPSIWDTFTQRSPAKISDGSNGNQAINCYH 97
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGD-TDRINEKGVQYYRNLINEVLSKNIQPMV 151
YKED+ +++ G + YRFS+SWSR+LP G +N+ GV++Y + I+E+L+ I+P V
Sbjct: 98 MYKEDIKIMKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSV 157
Query: 152 TLNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLD-VMGGYG 209
TL H+DLPQ L+ E+GG+ + + D F +A+ F FGDK+ YW T NEP + GY
Sbjct: 158 TLFHWDLPQALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKYWTTFNEPHTFAVNGYA 217
Query: 210 YKSGAPYLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNY 264
AP G GD Y+V HN+L AH A Y K++ Q+G++ I L+S
Sbjct: 218 LGEFAPGRGGKGDEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQEGEIGIVLNSMWM 277
Query: 265 YPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPR 324
P + + D +A +R F LG F P+ + GDYP +R++V + RLP+
Sbjct: 278 EPLSDV-QADIDAQKRALDFMLGWFLEPLTT--GDYPKSMRELV----------KGRLPK 324
Query: 325 FTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFS----QDPNWPSS 380
F+ ++ + LKG +DF +N+YT+ + N +++ S D T + Q P +
Sbjct: 325 FSADDSEKLKGCYDFIGMNYYTATYVTNAVKSNSEKLSYETDDQVTKTFERNQKPIGHAL 384
Query: 381 NSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSDDGRLD--------DEGRIDYY 430
W VVP G LL + K+ Y+ P +++TE+G ++ + D R DY+
Sbjct: 385 YGGWQHVVPWGLYKLLVYTKETYHVPVLYVTESGMVEENKTKILLSEARRDAERTDYH 442
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 136/287 (47%), Gaps = 62/287 (21%)
Query: 683 YVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWS 742
Y +G +IWD +PA + D NG+ A + YH YKED+ I+K G + YRFS+SWS
Sbjct: 62 YNEGNRGPSIWDTFTQRSPAKISDGSNGNQAINCYHMYKEDIKIMKQTGLESYRFSISWS 121
Query: 743 RILPTGDIDK-INEKGVQYYRNLIDELLLNNIQPMVKL---------------------- 779
R+LP G + +N+ GV++Y + IDELL N I+P V L
Sbjct: 122 RVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLPQALEDEYGGFLSHRIV 181
Query: 780 --------------------WITIKETLE-AMQGYDFKTYAPYLSMTGVGGE-----YLA 813
W T E A+ GY +AP G G+ Y+
Sbjct: 182 DDFCEYAEFCFWEFGDKIKYWTTFNEPHTFAVNGYALGEFAPGRGGKGDEGDPAIEPYVV 241
Query: 814 AHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGL 873
HN+L +H A Y K++ Q+G++ + LN+ + PL + D +A +R + F G
Sbjct: 242 THNILLAHKAAVEEYRNKFQKCQEGEIGIVLNSMWMEPLS-DVQADIDAQKRALDFMLGW 300
Query: 874 FAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 920
F P+ + GDYP +R++V + RLP+F+ ++ + LKG
Sbjct: 301 FLEPLTT--GDYPKSMRELV----------KGRLPKFSADDSEKLKG 335
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
Query: 431 AFQVYRFSLSWSRILPTGDIDK-INEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQ 489
+ YRFS+SWSR+LP G + +N+ GV++Y + IDELL N I+P VTL+HWDLPQ L+
Sbjct: 110 GLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLPQALE 169
Query: 490 D-FGGWTNAIIADYFETYADFAYKTFGDK-KYLTAMQK 525
D +GG+ + I D F YA+F + FGDK KY T +
Sbjct: 170 DEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKYWTTFNE 207
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 510 AYKTFGDKKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSFDY 569
A +T +K+L +++ A ++D N+ GY WS DNFEW GY CR+GI+HVD+ S Y
Sbjct: 436 AERTDYHQKHLASVRDA-IDDGVNVKGYFVWSFFDNFEWNLGYICRYGIIHVDYKSFERY 494
Query: 570 FGLNH--YTSFLVSKKTEPSPEPSFRNDANVVLSDDRK 605
+ Y +F+ K T SP R +A V L +K
Sbjct: 495 PKESAIWYKNFIAGKST-TSPAKRRREEAQVELVKRQK 531
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 13/111 (11%)
Query: 563 FSSSFDYFGLNHYTSFLVSKKTEPSPEP-SFRNDANVVLSDDR-KWPKGASF---WLKVV 617
+D+ G+N+YT+ V+ + + E S+ D V + +R + P G + W VV
Sbjct: 333 LKGCYDFIGMNYYTATYVTNAVKSNSEKLSYETDDQVTKTFERNQKPIGHALYGGWQHVV 392
Query: 618 PDGFRALLNWIKKEYNNPPVFITENGFSDDGQLD--------DQGRVDFYQ 660
P G LL + K+ Y+ P +++TE+G ++ + D R D++Q
Sbjct: 393 PWGLYKLLVYTKETYHVPVLYVTESGMVEENKTKILLSEARRDAERTDYHQ 443
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 932 KQKYLTALSKAIGE--DKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGY 984
K K L + ++ E D K+L ++ AI +D NV GY WS DNFEW GY
Sbjct: 424 KTKILLSEARRDAERTDYHQKHLASVRDAI-DDGVNVKGYFVWSFFDNFEWNLGY 477
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
Length = 449
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 225/414 (54%), Gaps = 41/414 (9%)
Query: 36 HQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYK 95
H FP F WG +TAA+Q+EGA+NEDG+G +IWD HT P VK+ N +VACDSYH+ +
Sbjct: 3 HMFPSDFKWGVATAAYQIEGAYNEDGRGMSIWDTFAHT-PGKVKNGDNGNVACDSYHRVE 61
Query: 96 EDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNH 155
EDV L++D+G +VYRFS+SW R+LP G T +N G+ YY L++E+L+ I+P TL H
Sbjct: 62 EDVQLLKDLGVKVYRFSISWPRVLPQG-TGEVNRAGLDYYHRLVDELLANGIEPFCTLYH 120
Query: 156 YDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGAP 215
+DLPQ LQ+ GGW + + D F +A++ FK G K+ WIT NEP + +
Sbjct: 121 WDLPQALQDQGGWGSRITIDAFAEYAELMFKELGGKIKQWITFNEP------WCMAFLSN 174
Query: 216 YLNLSGLGGDYL-----VAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNAT 270
YL + G L V+H+LL AH +A L+ + S G++ I ++ P+ T
Sbjct: 175 YLGVHAPGNKDLQLAIDVSHHLLVAHGRAVTLFRELGIS---GEIGIAPNTSWAVPYRRT 231
Query: 271 SKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEI 330
KED EA RV ++ + PIY G+YP + + K P + ++
Sbjct: 232 -KEDMEACLRVNGWSGDWYLDPIY--FGEYPKFMLDWYENLGYK--------PPIVDGDM 280
Query: 331 KALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPD 390
+ + DF +N+YTS + N + ++ A + P ++ W ++ +
Sbjct: 281 ELIHQPIDFIGINYYTSSM---NRYNPGEAGGMLSSEAISMGA----PKTDIGW-EIYAE 332
Query: 391 GFRALLNWIKKEYNNPPVFITEN------GFSDDGRLDDEGRIDYYAFQVYRFS 438
G LL + +Y NP ++ITEN G S DGR+ D+ RIDY A + + S
Sbjct: 333 GLYDLLRYTADKYGNPTLYITENGACYNDGLSLDGRIHDQRRIDYLAMHLIQAS 386
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 168/414 (40%), Gaps = 110/414 (26%)
Query: 670 WFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKD 729
W + + + Y G+G +IWD HT P V + NG+VACDSYH+ +EDV ++KD
Sbjct: 11 WGVATAAYQIEGAYNEDGRGMSIWDTFAHT-PGKVKNGDNGNVACDSYHRVEEDVQLLKD 69
Query: 730 LGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKLW-ITIKETLE 788
LG +VYRFS+SW R+LP G ++N G+ YY L+DELL N I+P L+ + + L+
Sbjct: 70 LGVKVYRFSISWPRVLPQG-TGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQALQ 128
Query: 789 AMQGYD-------FKTYAP---------------------------YLSMTGVGGEYL-- 812
G+ F YA YL + G + L
Sbjct: 129 DQGGWGSRITIDAFAEYAELMFKELGGKIKQWITFNEPWCMAFLSNYLGVHAPGNKDLQL 188
Query: 813 ---AAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQF 869
+H+LL +H +A L+ + G++ + NT + P +KED EA R +
Sbjct: 189 AIDVSHHLLVAHGRAVTLFREL---GISGEIGIAPNTSWAVPYR-RTKEDMEACLRVNGW 244
Query: 870 KFGLFAHPI------------YSQAGDYPPIV-------RQIVD----------QNSAKE 900
+ PI Y G PPIV Q +D N
Sbjct: 245 SGDWYLDPIYFGEYPKFMLDWYENLGYKPPIVDGDMELIHQPIDFIGINYYTSSMNRYNP 304
Query: 901 GRARSRLPRFTEEEIKALKGKTEE--EINALKGKQKYLTALSKAIGE------------- 945
G A L + E I KT+ EI A +G L + G
Sbjct: 305 GEAGGML---SSEAISMGAPKTDIGWEIYA-EGLYDLLRYTADKYGNPTLYITENGACYN 360
Query: 946 ---------------DKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGY 984
D +L S+AI ED N+ GY WSL+DNFEW GY
Sbjct: 361 DGLSLDGRIHDQRRIDYLAMHLIQASRAI-EDGINLKGYMEWSLMDNFEWAEGY 413
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
+VYRFS+SW R+LP G ++N G+ YY L+DELL N I+P TLYHWDLPQ LQD
Sbjct: 71 GVKVYRFSISWPRVLPQG-TGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQALQD 129
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
GGW + I D F YA+ +K G K
Sbjct: 130 QGGWGSRITIDAFAEYAELMFKELGGK 156
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 528 VNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ D N+ GY WS++DNFEW +GY RFG+VHVD+ +
Sbjct: 389 IEDGINLKGYMEWSLMDNFEWAEGYGMRFGLVHVDYDT 426
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 567 FDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRALLN 626
D+ G+N+YTS + + P + + + PK W ++ +G LL
Sbjct: 287 IDFIGINYYTSSM--NRYNPGEAGGMLSSEAISMGA----PKTDIGW-EIYAEGLYDLLR 339
Query: 627 WIKKEYNNPPVFITEN------GFSDDGQLDDQGRVDF 658
+ +Y NP ++ITEN G S DG++ DQ R+D+
Sbjct: 340 YTADKYGNPTLYITENGACYNDGLSLDGRIHDQRRIDY 377
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 225/400 (56%), Gaps = 36/400 (9%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
M K FP F+WG +T+++Q+EGA+NEDGKGE+IWD HT P +++ D+ACD YH
Sbjct: 8 MAKIIFPEDFIWGAATSSYQIEGAFNEDGKGESIWDRFSHT-PGKIENGDTGDIACDHYH 66
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
Y+ED+ L+++IG + YRFS SW RILP G R+N+KG+ +Y+ L++ +L NI+PM+T
Sbjct: 67 LYREDIELMKEIGIRSYRFSTSWPRILPEG-KGRVNQKGLDFYKRLVDNLLKANIRPMIT 125
Query: 153 LNHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYGYK 211
L H+DLPQ LQ+ GGW N A YF +A + F+ F V W+T NEP V G+ +
Sbjct: 126 LYHWDLPQALQDKGGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEPWVVAFEGHAFG 185
Query: 212 SGAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATS 271
+ AP VAH+LL +H A ++ ++ G++ ITL+ YP S
Sbjct: 186 NHAP--GTKDFKTALQVAHHLLLSHGMAVDIFREE---DLPGEIGITLNLTPAYP-AGDS 239
Query: 272 KEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEE--E 329
++D +AA + + F P++ G YP + I +QN L FT + +
Sbjct: 240 EKDVKAASLLDDYINAWFLSPVFK--GSYPEELHHIYEQN----------LGAFTTQPGD 287
Query: 330 IKALKGSFDFFALNHYTSILIAN--NNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKV 387
+ + DF +N+Y+ +++ + ++ NA + DR PS+ W ++
Sbjct: 288 MDIISRDIDFLGINYYSRMVVRHKPGDNLFNAEVVKMEDR----------PSTEMGW-EI 336
Query: 388 VPDGFRALLNWIKKEYNNPPVFITENGFSDDGRLDDEGRI 427
P G +L + KEY + P++ITENG + D +L +EG+I
Sbjct: 337 YPQGLYDILVRVNKEYTDKPLYITENGAAFDDKLTEEGKI 376
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 128/277 (46%), Gaps = 54/277 (19%)
Query: 664 VSFP--CFWFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYK 721
+ FP W + + + GKGE+IWDR HT P + + GD+ACD YH Y+
Sbjct: 11 IIFPEDFIWGAATSSYQIEGAFNEDGKGESIWDRFSHT-PGKIENGDTGDIACDHYHLYR 69
Query: 722 EDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPM----- 776
ED+ ++K++G + YRFS SW RILP G ++N+KG+ +Y+ L+D LL NI+PM
Sbjct: 70 EDIELMKEIGIRSYRFSTSWPRILPEGK-GRVNQKGLDFYKRLVDNLLKANIRPMITLYH 128
Query: 777 ------------------------------------VKLWITIKET-LEAMQGYDFKTYA 799
V LW+T E + A +G+ F +A
Sbjct: 129 WDLPQALQDKGGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEPWVVAFEGHAFGNHA 188
Query: 800 PYLSMTGVGGEYLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKED 859
P AH+LL SH A ++ ++ P G++ +TLN YP S K D
Sbjct: 189 P--GTKDFKTALQVAHHLLLSHGMAVDIFREEDLP---GEIGITLNLTPAYPAGDSEK-D 242
Query: 860 QEAAERYIQFKFGLFAHPIYSQAGDYPPIVRQIVDQN 896
+AA + F P++ G YP + I +QN
Sbjct: 243 VKAASLLDDYINAWFLSPVFK--GSYPEELHHIYEQN 277
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
+ YRFS SW RILP G ++N+KG+ +Y+ L+D LL NI+PM+TLYHWDLPQ LQD
Sbjct: 79 GIRSYRFSTSWPRILPEGK-GRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLPQALQD 137
Query: 491 FGGWTNAIIADYFETYADFAYKTF 514
GGWTN A YF YA ++ F
Sbjct: 138 KGGWTNRDTAKYFAEYARLMFEEF 161
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 549 LDGYTCRFGIVHVDFSSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPK 608
L +T + G + + S D+ G+N+Y+ +V K P + N A VV +DR P
Sbjct: 278 LGAFTTQPGDMDI-ISRDIDFLGINYYSRMVVRHK----PGDNLFN-AEVVKMEDR--PS 329
Query: 609 GASFWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSDDGQLDDQGRV 656
W ++ P G +L + KEY + P++ITENG + D +L ++G++
Sbjct: 330 TEMGW-EIYPQGLYDILVRVNKEYTDKPLYITENGAAFDDKLTEEGKI 376
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 528 VNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSS 566
+ D + GY WS++DNFEW GY+ RFG+++VD+ +
Sbjct: 396 LKDGVPLRGYYVWSLMDNFEWAYGYSKRFGLIYVDYENG 434
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From Soil
Metagenome
Length = 465
Score = 239 bits (609), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 218/402 (54%), Gaps = 36/402 (8%)
Query: 30 GTQMNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACD 89
G+ MN +FP GFLWG +T+++Q+EGAWNEDGKGE+IWD P +K+ + DVACD
Sbjct: 18 GSHMNVKKFPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRI-PGKIKNGDSGDVACD 76
Query: 90 SYHKYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDR-INEKGVQYYRNLINEVLSKNIQ 148
YH+Y++D+ L+R +G + YRFS++W+RI P D+ R IN++G+ +YR L+ + ++I
Sbjct: 77 HYHRYEQDLDLMRQLGLKTYRFSIAWARIQP--DSSRQINQRGLDFYRRLVEGLHKRDIL 134
Query: 149 PMVTLNHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPL-DVMGG 207
PM TL H+DLPQ +++ GGW + A F + GD++P W+T NEP+ V G
Sbjct: 135 PMATLYHWDLPQWVEDEGGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAG 194
Query: 208 YGYKSGAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPH 267
Y AP L LGG VAH+LL +H +A + + + S ++ ITL+ YP
Sbjct: 195 YHMGLFAPGLKDPTLGGR--VAHHLLLSHGQALQAF--RALSPAGSQMGITLNFNTIYPV 250
Query: 268 NATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRF-T 326
+A D EAA R+ F LF P+ I Q + A LP F
Sbjct: 251 SA-EPADVEAARRMHSFQNELFLEPL-------------IRGQYNQATLMAYPNLPEFIA 296
Query: 327 EEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLK 386
E+++ + DF +N+Y + + +S PP + + P + W +
Sbjct: 297 PEDMQTISAPIDFLGVNYYNPMRV----KSSPQPPGIEVVQVES-------PVTAMGW-E 344
Query: 387 VVPDGFRALLNWIKKEYNNPPVFITENGFSDDGRLDDEGRID 428
+ P+G LL I + Y P++ITENG + D + D G+++
Sbjct: 345 IAPEGLYDLLMGITRTYGKLPIYITENGAAFDDQPDQSGQVN 386
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 118/260 (45%), Gaps = 53/260 (20%)
Query: 669 FWFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIK 728
W + + + GKGE+IWDR P + + +GDVACD YH+Y++D+ +++
Sbjct: 31 LWGAATSSYQIEGAWNEDGKGESIWDRFTRI-PGKIKNGDSGDVACDHYHRYEQDLDLMR 89
Query: 729 DLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPM------------ 776
LG + YRFS++W+RI P +IN++G+ +YR L++ L +I PM
Sbjct: 90 QLGLKTYRFSIAWARIQPDSS-RQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQWV 148
Query: 777 -----------------------------VKLWITIKETLEAM-QGYDFKTYAPYLSMTG 806
+ LW+T E + + GY +AP L
Sbjct: 149 EDEGGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFAPGLKDPT 208
Query: 807 VGGEYLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERY 866
+GG AH+LL SH +A + + + + L NT + +P+ D EAA R
Sbjct: 209 LGGR--VAHHLLLSHGQALQAFRALSPAGSQMGITLNFNTIYPVSAEPA---DVEAARRM 263
Query: 867 IQFKFGLFAHPI----YSQA 882
F+ LF P+ Y+QA
Sbjct: 264 HSFQNELFLEPLIRGQYNQA 283
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
+ YRFS++W+RI P +IN++G+ +YR L++ L +I PM TLYHWDLPQ ++D
Sbjct: 92 GLKTYRFSIAWARIQPDSS-RQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQWVED 150
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
GGW + A F Y GD+
Sbjct: 151 EGGWLSRESASRFAEYTHALVAALGDQ 177
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ ++ A ++AL D ++ GY AWS+LDNFEW +GY+ RFGI++VDF +
Sbjct: 395 QGHIGAARRALA-DGVDLRGYYAWSLLDNFEWAEGYSKRFGIIYVDFET 442
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 17/105 (16%)
Query: 563 FSSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFR 622
S+ D+ G+N+Y + + SP+P V + P A W ++ P+G
Sbjct: 303 ISAPIDFLGVNYYNPM----RVKSSPQPPGIEVVQV------ESPVTAMGW-EIAPEGLY 351
Query: 623 ALLNWIKKEYNNPPVFITENGFSDD------GQLDDQGRVDFYQG 661
LL I + Y P++ITENG + D GQ++D RV ++QG
Sbjct: 352 DLLMGITRTYGKLPIYITENGAAFDDQPDQSGQVNDPQRVGYFQG 396
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 156/432 (36%), Positives = 230/432 (53%), Gaps = 54/432 (12%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVK-DRQNADVACDSY 91
+N F F++G +++A+Q+EG G+G NIWD H PD D N D CDS+
Sbjct: 20 LNSSSFEADFIFGVASSAYQIEGTI---GRGLNIWDGFTHRYPDKSGPDHGNGDTTCDSF 76
Query: 92 HKYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDR-INEKGVQYYRNLINEVLSKNIQPM 150
+++D+ ++ ++ YRFS++WSRI+P G R +N+KG+ YY LI+ ++ K I P
Sbjct: 77 SYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNQKGIDYYHGLIDGLIKKGITPF 136
Query: 151 VTLNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGY 208
VTL H+DLPQ LQ E+ G+ +P + D F+ +AD+ F+ FGD V YW+TIN+ V GY
Sbjct: 137 VTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGY 196
Query: 209 GYKSGA-----PYLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSIT 258
G A P ++ S G+ Y+VAH+ L AHAK LY K Y + Q GK+ T
Sbjct: 197 GSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNY-THQGGKIGPT 255
Query: 259 LDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRA 318
+ + + P+N T + A ER+ QF LG F P+ + G YP I+ V
Sbjct: 256 MITRWFLPYNDTDRHSIAATERMKQFFLGWFMGPLTN--GTYPQIMIDTVG--------- 304
Query: 319 RSRLPRFTEEEIKALKGSFDFFALNHYTSIL-------IANNNHT----SNAPPSTINDR 367
+RLP F+ EE +KGS+DF LN+Y + + NHT + A + IN
Sbjct: 305 -ARLPTFSPEETNLVKGSYDFLGLNYYFTQYAQPSPNPVNATNHTAMMDAGAKLTYINAS 363
Query: 368 ----AATFSQDPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSDDG---- 419
F D SSN + P G +++++ K +Y NP +++TENG S G
Sbjct: 364 GHYIGPLFESDGGDGSSN---IYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGSENR 420
Query: 420 --RLDDEGRIDY 429
+ D RIDY
Sbjct: 421 KESMLDYTRIDY 432
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 126/290 (43%), Gaps = 68/290 (23%)
Query: 687 GKGENIWDRLVHTNP-AAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRIL 745
G+G NIWD H P + D NGD CDS+ +++D+ ++ +L YRFS++WSRI+
Sbjct: 45 GRGLNIWDGFTHRYPDKSGPDHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRII 104
Query: 746 PTGDIDK-INEKGVQYYRNLIDELLLNNIQPMVKL--WITIKETLEAMQGY-------DF 795
P G + +N+KG+ YY LID L+ I P V L W + + +G+ DF
Sbjct: 105 PRGKRSRGVNQKGIDYYHGLIDGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDF 164
Query: 796 KTYA---------------------------------------PYLSMTGVGGE-----Y 811
K YA P + + G Y
Sbjct: 165 KDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPY 224
Query: 812 LAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKF 871
+ AH+ L +HAK LY K Y Q GK+ T+ T + P + + + A ER QF
Sbjct: 225 IVAHHQLLAHAKVVDLYRKNYT-HQGGKIGPTMITRWFLPYNDTDRHSIAATERMKQFFL 283
Query: 872 GLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
G F P+ + G YP I+ V +RLP F+ EE +KG
Sbjct: 284 GWFMGPLTN--GTYPQIMIDTVG----------ARLPTFSPEETNLVKGS 321
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 4/94 (4%)
Query: 435 YRFSLSWSRILPTGDIDK-INEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD-FG 492
YRFS++WSRI+P G + +N+KG+ YY LID L+ I P VTL+HWDLPQ LQD +
Sbjct: 94 YRFSIAWSRIIPRGKRSRGVNQKGIDYYHGLIDGLIKKGITPFVTLFHWDLPQTLQDEYE 153
Query: 493 GWTNAIIADYFETYADFAYKTFGD--KKYLTAMQ 524
G+ + I D F+ YAD ++ FGD K +LT Q
Sbjct: 154 GFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQ 187
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 33/51 (64%)
Query: 518 KYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSFD 568
+L + K + N+ GY AW++ DN+E+ +G+T RFG+ ++++++ D
Sbjct: 435 SHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNNGFTVRFGLSYINWNNVTD 485
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWP-----------------K 608
S+D+ GLN+Y ++ +PSP P + ++ K
Sbjct: 321 SYDFLGLNYY----FTQYAQPSPNPVNATNHTAMMDAGAKLTYINASGHYIGPLFESDGG 376
Query: 609 GASFWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSDDG------QLDDQGRVDF 658
S + P G +++++ K +Y NP +++TENG S G + D R+D+
Sbjct: 377 DGSSNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGSENRKESMLDYTRIDY 432
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 946 DKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
D +L L+K I E NV GY AW+L DN+E+ G+T
Sbjct: 431 DYLCSHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNNGFT 470
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 215/398 (54%), Gaps = 36/398 (9%)
Query: 34 NKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHK 93
N +FP GFLWG +T+++Q+EGAWNEDGKGE+IWD P +K+ + DVACD YH+
Sbjct: 1 NVKKFPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRI-PGKIKNGDSGDVACDHYHR 59
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGDTDR-INEKGVQYYRNLINEVLSKNIQPMVT 152
Y++D+ L+R +G + YRFS++W+RI P D+ R IN++G+ +YR L+ + ++I PM T
Sbjct: 60 YEQDLDLMRQLGLKTYRFSIAWARIQP--DSSRQINQRGLDFYRRLVEGLHKRDILPMAT 117
Query: 153 LNHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPL-DVMGGYGYK 211
L H+DLPQ +++ GGW + A F + GD++P W+T NEP+ V GY
Sbjct: 118 LYHWDLPQWVEDEGGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMG 177
Query: 212 SGAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATS 271
AP L LGG VAH+LL +H +A + + + S ++ ITL+ YP +A
Sbjct: 178 LFAPGLKDPTLGGR--VAHHLLLSHGQALQAF--RALSPAGSQMGITLNFNTIYPVSA-E 232
Query: 272 KEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRF-TEEEI 330
D EAA R+ F LF P+ I Q + A LP F E++
Sbjct: 233 PADVEAARRMHSFQNELFLEPL-------------IRGQYNQATLMAYPNLPEFIAPEDM 279
Query: 331 KALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPD 390
+ + DF +N+Y + + +S PP + + P + W ++ P+
Sbjct: 280 QTISAPIDFLGVNYYNPMRV----KSSPQPPGIEVVQVES-------PVTAMGW-EIAPE 327
Query: 391 GFRALLNWIKKEYNNPPVFITENGFSDDGRLDDEGRID 428
G LL I + Y P++ITENG + D + D G+++
Sbjct: 328 GLYDLLMGITRTYGKLPIYITENGAAFDDQPDQSGQVN 365
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 118/260 (45%), Gaps = 53/260 (20%)
Query: 669 FWFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIK 728
W + + + GKGE+IWDR P + + +GDVACD YH+Y++D+ +++
Sbjct: 10 LWGAATSSYQIEGAWNEDGKGESIWDRFTRI-PGKIKNGDSGDVACDHYHRYEQDLDLMR 68
Query: 729 DLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPM------------ 776
LG + YRFS++W+RI P +IN++G+ +YR L++ L +I PM
Sbjct: 69 QLGLKTYRFSIAWARIQPDSS-RQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQWV 127
Query: 777 -----------------------------VKLWITIKETLEAM-QGYDFKTYAPYLSMTG 806
+ LW+T E + + GY +AP L
Sbjct: 128 EDEGGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFAPGLKDPT 187
Query: 807 VGGEYLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERY 866
+GG AH+LL SH +A + + + + L NT + +P+ D EAA R
Sbjct: 188 LGGR--VAHHLLLSHGQALQAFRALSPAGSQMGITLNFNTIYPVSAEPA---DVEAARRM 242
Query: 867 IQFKFGLFAHPI----YSQA 882
F+ LF P+ Y+QA
Sbjct: 243 HSFQNELFLEPLIRGQYNQA 262
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
+ YRFS++W+RI P +IN++G+ +YR L++ L +I PM TLYHWDLPQ ++D
Sbjct: 71 GLKTYRFSIAWARIQPDSS-RQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQWVED 129
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
GGW + A F Y GD+
Sbjct: 130 EGGWLSRESASRFAEYTHALVAALGDQ 156
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ ++ A ++AL D ++ GY AWS+LDNFEW +GY+ RFGI++VDF +
Sbjct: 374 QGHIGAARRALA-DGVDLRGYYAWSLLDNFEWAEGYSKRFGIIYVDFET 421
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 17/105 (16%)
Query: 563 FSSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFR 622
S+ D+ G+N+Y V SP+P V + P A W ++ P+G
Sbjct: 282 ISAPIDFLGVNYYNPMRVKS----SPQPPGIEVVQV------ESPVTAMGW-EIAPEGLY 330
Query: 623 ALLNWIKKEYNNPPVFITENGFSDD------GQLDDQGRVDFYQG 661
LL I + Y P++ITENG + D GQ++D RV ++QG
Sbjct: 331 DLLMGITRTYGKLPIYITENGAAFDDQPDQSGQVNDPQRVGYFQG 375
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1:
Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 2:
Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part 3
Structure After Irradiation With 18.210e15 PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 4:
Structure After Irradiation With 27.210e15 PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 5:
Structure After Irradiation With 54.010e15 PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Refined
Part 6: Structure After A Radiation Dose Of 5410e15
PhotonsMM2
Length = 499
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 225/420 (53%), Gaps = 54/420 (12%)
Query: 45 GCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLV-KDRQNADVACDSYHKYKEDVALIRD 103
G +++A+Q+EG G+G NIWD H P+ D N D CDS+ +++D+ ++ +
Sbjct: 30 GVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDE 86
Query: 104 IGFQVYRFSLSWSRILPTGDTDR-INEKGVQYYRNLINEVLSKNIQPMVTLNHYDLPQPL 162
+ YRFS++WSRI+P G R +NEKG+ YY LI+ ++ K I P VTL H+DLPQ L
Sbjct: 87 LNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTL 146
Query: 163 Q-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYGYKSGA-----P 215
Q E+ G+ +P + D F+ +AD+ F+ FGD V YW+TIN+ V GYG A P
Sbjct: 147 QDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSP 206
Query: 216 YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNAT 270
++ S G+ Y+VAH+ L AHAK LY K Y + Q GK+ T+ + + P+N T
Sbjct: 207 TVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNY-THQGGKIGPTMITRWFLPYNDT 265
Query: 271 SKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEI 330
+ A ER+ +F LG F P+ + G YP I+ V + RLP F+ EE
Sbjct: 266 DRHSIAATERMKEFFLGWFMGPLTN--GTYPQIMIDTVGE----------RLPSFSPEES 313
Query: 331 KALKGSFDFFALNHYTSIL-------IANNNHT----SNAPPSTINDR----AATFSQDP 375
+KGS+DF LN+Y + + + NHT + A + IN F +D
Sbjct: 314 NLVKGSYDFLGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDK 373
Query: 376 NWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSDDG------RLDDEGRIDY 429
+ N + P G +++++ K +Y NP +++TENG S G + D RIDY
Sbjct: 374 ADSTDN---IYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDY 430
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 125/289 (43%), Gaps = 68/289 (23%)
Query: 687 GKGENIWDRLVHTNP-AAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRIL 745
G+G NIWD H P + D NGD CDS+ +++D+ ++ +L YRFS++WSRI+
Sbjct: 43 GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRII 102
Query: 746 PTGDIDK-INEKGVQYYRNLIDELLLNNIQPMVKL--WITIKETLEAMQGY-------DF 795
P G + +NEKG+ YY LI L+ I P V L W + + +G+ DF
Sbjct: 103 PRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDF 162
Query: 796 KTYA---------------------------------------PYLSMTGVGGE-----Y 811
K YA P + + G Y
Sbjct: 163 KDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPY 222
Query: 812 LAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKF 871
+ AH+ L +HAK LY K Y Q GK+ T+ T + P + + + A ER +F
Sbjct: 223 IVAHHQLLAHAKVVDLYRKNYT-HQGGKIGPTMITRWFLPYNDTDRHSIAATERMKEFFL 281
Query: 872 GLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 920
G F P+ + G YP I+ V + RLP F+ EE +KG
Sbjct: 282 GWFMGPLTN--GTYPQIMIDTVGE----------RLPSFSPEESNLVKG 318
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 435 YRFSLSWSRILPTGDIDK-INEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD-FG 492
YRFS++WSRI+P G + +NEKG+ YY LI L+ I P VTL+HWDLPQ LQD +
Sbjct: 92 YRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTLQDEYE 151
Query: 493 GWTNAIIADYFETYADFAYKTFGD--KKYLTAMQ 524
G+ + I D F+ YAD ++ FGD K +LT Q
Sbjct: 152 GFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQ 185
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 519 YLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSFD 568
+L + K + N+ GY AW++ DN+E+ G+T RFG+ ++D+++ D
Sbjct: 434 HLCFLNKVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTD 483
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 27/116 (23%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRK--WPKGASFWLKVV------ 617
S+D+ GLN+Y ++ +PSP P + ++ K + + ++ +
Sbjct: 319 SYDFLGLNYY----FTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKA 374
Query: 618 ---------PDGFRALLNWIKKEYNNPPVFITENGFSDDG------QLDDQGRVDF 658
P G +++++ K +Y NP +++TENG S G + D R+D+
Sbjct: 375 DSTDNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDY 430
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 946 DKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
D +L L+K I E NV GY AW+L DN+E+ G+T
Sbjct: 429 DYLCSHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNKGFT 468
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition State
Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound To
Plant Myrosinase
Length = 501
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 225/420 (53%), Gaps = 54/420 (12%)
Query: 45 GCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLV-KDRQNADVACDSYHKYKEDVALIRD 103
G +++A+Q+EG G+G NIWD H P+ D N D CDS+ +++D+ ++ +
Sbjct: 32 GVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDE 88
Query: 104 IGFQVYRFSLSWSRILPTGDTDR-INEKGVQYYRNLINEVLSKNIQPMVTLNHYDLPQPL 162
+ YRFS++WSRI+P G R +NEKG+ YY LI+ ++ K I P VTL H+DLPQ L
Sbjct: 89 LNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTL 148
Query: 163 Q-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYGYKSGA-----P 215
Q E+ G+ +P + D F+ +AD+ F+ FGD V YW+TIN+ V GYG A P
Sbjct: 149 QDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSP 208
Query: 216 YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNAT 270
++ S G+ Y+VAH+ L AHAK LY K Y + Q GK+ T+ + + P+N T
Sbjct: 209 TVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNY-THQGGKIGPTMITRWFLPYNDT 267
Query: 271 SKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEI 330
+ A ER+ +F LG F P+ + G YP I+ V + RLP F+ EE
Sbjct: 268 DRHSIAATERMKEFFLGWFMGPLTN--GTYPQIMIDTVGE----------RLPSFSPEES 315
Query: 331 KALKGSFDFFALNHYTSIL-------IANNNHT----SNAPPSTINDR----AATFSQDP 375
+KGS+DF LN+Y + + + NHT + A + IN F +D
Sbjct: 316 NLVKGSYDFLGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDK 375
Query: 376 NWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSDDG------RLDDEGRIDY 429
+ N + P G +++++ K +Y NP +++TENG S G + D RIDY
Sbjct: 376 ADSTDN---IYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDY 432
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 125/289 (43%), Gaps = 68/289 (23%)
Query: 687 GKGENIWDRLVHTNP-AAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRIL 745
G+G NIWD H P + D NGD CDS+ +++D+ ++ +L YRFS++WSRI+
Sbjct: 45 GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRII 104
Query: 746 PTGDIDK-INEKGVQYYRNLIDELLLNNIQPMVKL--WITIKETLEAMQGY-------DF 795
P G + +NEKG+ YY LI L+ I P V L W + + +G+ DF
Sbjct: 105 PRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDF 164
Query: 796 KTYA---------------------------------------PYLSMTGVGGE-----Y 811
K YA P + + G Y
Sbjct: 165 KDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPY 224
Query: 812 LAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKF 871
+ AH+ L +HAK LY K Y Q GK+ T+ T + P + + + A ER +F
Sbjct: 225 IVAHHQLLAHAKVVDLYRKNYT-HQGGKIGPTMITRWFLPYNDTDRHSIAATERMKEFFL 283
Query: 872 GLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 920
G F P+ + G YP I+ V + RLP F+ EE +KG
Sbjct: 284 GWFMGPLTN--GTYPQIMIDTVGE----------RLPSFSPEESNLVKG 320
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 435 YRFSLSWSRILPTGDIDK-INEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD-FG 492
YRFS++WSRI+P G + +NEKG+ YY LI L+ I P VTL+HWDLPQ LQD +
Sbjct: 94 YRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTLQDEYE 153
Query: 493 GWTNAIIADYFETYADFAYKTFGD--KKYLTAMQ 524
G+ + I D F+ YAD ++ FGD K +LT Q
Sbjct: 154 GFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQ 187
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 519 YLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSFD 568
+L + K + N+ GY AW++ DN+E+ G+T RFG+ ++D+++ D
Sbjct: 436 HLCFLNKVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTD 485
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 31/127 (24%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRK--WPKGASFWLKVV------ 617
S+D+ GLN+Y ++ +PSP P + ++ K + + ++ +
Sbjct: 321 SYDFLGLNYY----FTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKA 376
Query: 618 ---------PDGFRALLNWIKKEYNNPPVFITENGFSDDG------QLDDQGRVDFYQGL 662
P G +++++ K +Y NP +++TENG S G + D R+D+
Sbjct: 377 DSTDNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDYL--- 433
Query: 663 SVSFPCF 669
S CF
Sbjct: 434 -CSHLCF 439
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 946 DKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
D +L L+K I E NV GY AW+L DN+E+ G+T
Sbjct: 431 DYLCSHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNKGFT 470
>pdb|1TR1|A Chain A, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|B Chain B, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|C Chain C, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|D Chain D, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
Length = 447
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 213/408 (52%), Gaps = 36/408 (8%)
Query: 37 QFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKE 96
QFP F+WG +TAA+Q+EGA+ EDG+G +IWD HT P V + N +VACDSYH+Y+E
Sbjct: 4 QFPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHT-PGKVFNGDNGNVACDSYHRYEE 62
Query: 97 DVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHY 156
D+ L++++G + YRFS+SW RI P GD + +N+KG+ YY +++ + I+P TL H+
Sbjct: 63 DIRLMKELGIRTYRFSVSWPRIFPNGDGE-VNQKGLDYYHRVVDLLNDNGIEPFCTLYHW 121
Query: 157 DLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGAPY 216
DLPQ LQ+ GGW N F FA+ F+ F K+ +W+T NEP + G
Sbjct: 122 DLPQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPW-CIAFLSNMLGVHA 180
Query: 217 LNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQE 276
L+ L V H+LL AH + R + + S G++ I + P+ +TS+ED+
Sbjct: 181 PGLTNLQTAIDVGHHLLVAHGLSVRRFRELGTS---GQIGIAPNVSWAVPY-STSEEDKA 236
Query: 277 AAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGS 336
A R F PIY G YP Q + A++G + +P + ++ +
Sbjct: 237 ACARTISLHSDWFLQPIYQ--GSYP----QFLVDWFAEQG---ATVP-IQDGDMDIIGEP 286
Query: 337 FDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRALL 396
D +N+Y+ + N IN D WP V G +L
Sbjct: 287 IDMIGINYYSMSVNRFNPEAGFLQSEEIN--MGLPVTDIGWP--------VESRGLYEVL 336
Query: 397 NWIKKEYNNPPVFITENG--FSDD---GRLDDEGRIDY---YAFQVYR 436
++++K Y N ++ITENG +D+ G++ D+ RI Y + QV+R
Sbjct: 337 HYLQK-YGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHR 383
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 164/409 (40%), Gaps = 102/409 (24%)
Query: 669 FWFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIK 728
W + + Y G+G +IWD HT P V + NG+VACDSYH+Y+ED+ ++K
Sbjct: 10 MWGTATAAYQIEGAYQEDGRGLSIWDTFAHT-PGKVFNGDNGNVACDSYHRYEEDIRLMK 68
Query: 729 DLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKLW-ITIKETL 787
+LG + YRFS+SW RI P GD ++N+KG+ YY ++D L N I+P L+ + + L
Sbjct: 69 ELGIRTYRFSVSWPRIFPNGD-GEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQAL 127
Query: 788 EAMQGYD-------FKTYAPYL------------------------SMTGVGGEYL---- 812
+ G+ F +A + +M GV L
Sbjct: 128 QDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLTNLQ 187
Query: 813 ----AAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQ 868
H+LL +H + R + + G++ + N + P +S+ED+ A R I
Sbjct: 188 TAIDVGHHLLVAHGLSVRRFREL---GTSGQIGIAPNVSWAVPYS-TSEEDKAACARTIS 243
Query: 869 FKFGLFAHPIYSQAGDYP--------------------------PIVRQIVDQNSAKEGR 902
F PIY G YP PI ++ S R
Sbjct: 244 LHSDWFLQPIYQ--GSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYSMSVNR 301
Query: 903 ARSRLPRFTEEEIKALKGKTE-----------EEINALK---GKQKYLTALSKAIGEDKC 948
EEI T+ E ++ L+ Y+T I ++
Sbjct: 302 FNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYLQKYGNIDIYITENGACINDEVV 361
Query: 949 N-------------KYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGY 984
N ++L + + I D +V GY AWSLLDNFEW GY
Sbjct: 362 NGKVQDDRRISYMQQHLVQVHRTI-HDGLHVKGYMAWSLLDNFEWAEGY 409
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 21/183 (11%)
Query: 371 FSQDPNWPSSNSPWL---KVVPDGFRALLNWIKKEYNNPPVFITENG---------FSDD 418
F QD W ++ + + DG R L W + VF +NG + +D
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDG-RGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEED 63
Query: 419 GRLDDEGRIDYYAFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVT 478
RL E + YRFS+SW RI P GD ++N+KG+ YY ++D L N I+P T
Sbjct: 64 IRLMKE-----LGIRTYRFSVSWPRIFPNGD-GEVNQKGLDYYHRVVDLLNDNGIEPFCT 117
Query: 479 LYHWDLPQPLQDFGGWTNAIIADYFETYADFAYKTFGDK--KYLTAMQKALVNDKCNIIG 536
LYHWDLPQ LQD GGW N F +A+ ++ F K +LT + + N++G
Sbjct: 118 LYHWDLPQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLG 177
Query: 537 YTA 539
A
Sbjct: 178 VHA 180
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 6/56 (10%)
Query: 516 DKKYLTAMQKALV------NDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
D + ++ MQ+ LV +D ++ GY AWS+LDNFEW +GY RFG++HVDF +
Sbjct: 367 DDRRISYMQQHLVQVHRTIHDGLHVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFRT 422
>pdb|1E4I|A Chain A, 2-Deoxy-2-Fluoro-Beta-D-GlucosylENZYME INTERMEDIATE
Complex Of The Beta-Glucosidase From Bacillus Polymyxa
Length = 447
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 213/408 (52%), Gaps = 36/408 (8%)
Query: 37 QFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKE 96
QFP F+WG +TAA+Q+EGA+ EDG+G +IWD HT P V + N +VACDSYH+Y+E
Sbjct: 4 QFPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHT-PGKVFNGDNGNVACDSYHRYEE 62
Query: 97 DVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHY 156
D+ L++++G + YRFS+SW RI P GD + +N+KG+ YY +++ + I+P TL H+
Sbjct: 63 DIRLMKELGIRTYRFSVSWPRIFPNGDGE-VNQKGLDYYHRVVDLLNDNGIEPFCTLYHW 121
Query: 157 DLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGAPY 216
DLPQ LQ+ GGW N F FA+ F+ F K+ +W+T NEP + G
Sbjct: 122 DLPQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPW-CIAFLSNMLGVHA 180
Query: 217 LNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQE 276
L+ L V H+LL AH + R + + S G++ I + P+ +TS+ED+
Sbjct: 181 PGLTNLQTAIDVGHHLLVAHGLSVRRFRELGTS---GQIGIAPNVSWAVPY-STSEEDKA 236
Query: 277 AAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGS 336
A R F PIY G YP Q + A++G + +P + ++ +
Sbjct: 237 ACARTISLHSDWFLQPIYQ--GSYP----QFLVDWFAEQG---ATVP-IQDGDMDIIGEP 286
Query: 337 FDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRALL 396
D +N+Y+ + N IN D WP V G +L
Sbjct: 287 IDMIGINYYSMSVNRFNPEAGFLQSEEIN--MGLPVTDIGWP--------VESRGLYEVL 336
Query: 397 NWIKKEYNNPPVFITENG--FSDD---GRLDDEGRIDY---YAFQVYR 436
++++K Y N ++ITENG +D+ G++ D+ RI Y + QV+R
Sbjct: 337 HYLQK-YGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHR 383
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 164/409 (40%), Gaps = 102/409 (24%)
Query: 669 FWFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIK 728
W + + Y G+G +IWD HT P V + NG+VACDSYH+Y+ED+ ++K
Sbjct: 10 MWGTATAAYQIEGAYQEDGRGLSIWDTFAHT-PGKVFNGDNGNVACDSYHRYEEDIRLMK 68
Query: 729 DLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKLW-ITIKETL 787
+LG + YRFS+SW RI P GD ++N+KG+ YY ++D L N I+P L+ + + L
Sbjct: 69 ELGIRTYRFSVSWPRIFPNGD-GEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQAL 127
Query: 788 EAMQGYD-------FKTYAPYL------------------------SMTGVGGEYL---- 812
+ G+ F +A + +M GV L
Sbjct: 128 QDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLTNLQ 187
Query: 813 ----AAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQ 868
H+LL +H + R + + G++ + N + P +S+ED+ A R I
Sbjct: 188 TAIDVGHHLLVAHGLSVRRFREL---GTSGQIGIAPNVSWAVPYS-TSEEDKAACARTIS 243
Query: 869 FKFGLFAHPIYSQAGDYP--------------------------PIVRQIVDQNSAKEGR 902
F PIY G YP PI ++ S R
Sbjct: 244 LHSDWFLQPIYQ--GSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYSMSVNR 301
Query: 903 ARSRLPRFTEEEIKALKGKTE-----------EEINALK---GKQKYLTALSKAIGEDKC 948
EEI T+ E ++ L+ Y+T I ++
Sbjct: 302 FNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYLQKYGNIDIYITENGACINDEVV 361
Query: 949 N-------------KYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGY 984
N ++L + + I D +V GY AWSLLDNFEW GY
Sbjct: 362 NGKVQDDRRISYMQQHLVQVHRTI-HDGLHVKGYMAWSLLDNFEWAEGY 409
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 21/183 (11%)
Query: 371 FSQDPNWPSSNSPWL---KVVPDGFRALLNWIKKEYNNPPVFITENG---------FSDD 418
F QD W ++ + + DG R L W + VF +NG + +D
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDG-RGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEED 63
Query: 419 GRLDDEGRIDYYAFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVT 478
RL E + YRFS+SW RI P GD ++N+KG+ YY ++D L N I+P T
Sbjct: 64 IRLMKE-----LGIRTYRFSVSWPRIFPNGD-GEVNQKGLDYYHRVVDLLNDNGIEPFCT 117
Query: 479 LYHWDLPQPLQDFGGWTNAIIADYFETYADFAYKTFGDK--KYLTAMQKALVNDKCNIIG 536
LYHWDLPQ LQD GGW N F +A+ ++ F K +LT + + N++G
Sbjct: 118 LYHWDLPQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLG 177
Query: 537 YTA 539
A
Sbjct: 178 VHA 180
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 6/56 (10%)
Query: 516 DKKYLTAMQKALV------NDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
D + ++ MQ+ LV +D ++ GY AWS+LDNFEW +GY RFG++HVDF +
Sbjct: 367 DDRRISYMQQHLVQVHRTIHDGLHVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFRT 422
>pdb|1BGG|A Chain A, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|B Chain B, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|C Chain C, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|D Chain D, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
Length = 448
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 214/412 (51%), Gaps = 36/412 (8%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
M QFP F+WG +TAA+Q+EGA+ EDG+G +IWD HT P V + N +VACDSYH
Sbjct: 1 MTIFQFPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHT-PGKVFNGDNGNVACDSYH 59
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
+Y+ED+ L++++G + YRFS+SW RI P GD + +N++G+ YY +++ + I+P T
Sbjct: 60 RYEEDIRLMKELGIRTYRFSVSWPRIFPNGDGE-VNQEGLDYYHRVVDLLNDNGIEPFCT 118
Query: 153 LNHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKS 212
L H+DLPQ LQ+ GGW N F FA+ F+ F K+ +W+T NEP +
Sbjct: 119 LYHWDLPQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPW-CIAFLSNML 177
Query: 213 GAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSK 272
G L+ L V H+LL AH + R + + S G++ I + P+ +TS+
Sbjct: 178 GVHAPGLTNLQTAIDVGHHLLVAHGLSVRRFRELGTS---GQIGIAPNVSWAVPY-STSE 233
Query: 273 EDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKA 332
ED+ A R F PIY G YP Q + A++G + +P + ++
Sbjct: 234 EDKAACARTISLHSDWFLQPIYQ--GSYP----QFLVDWFAEQG---ATVP-IQDGDMDI 283
Query: 333 LKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGF 392
+ D +N+Y+ + N IN D WP V G
Sbjct: 284 IGEPIDMIGINYYSMSVNRFNPEAGFLQSEEIN--MGLPVTDIGWP--------VESRGL 333
Query: 393 RALLNWIKKEYNNPPVFITENG--FSDD---GRLDDEGRIDY---YAFQVYR 436
+L++++K Y N ++ITENG +D+ G++ D+ RI Y + QV+R
Sbjct: 334 YEVLHYLQK-YGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHR 384
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 164/409 (40%), Gaps = 102/409 (24%)
Query: 669 FWFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIK 728
W + + Y G+G +IWD HT P V + NG+VACDSYH+Y+ED+ ++K
Sbjct: 11 MWGTATAAYQIEGAYQEDGRGLSIWDTFAHT-PGKVFNGDNGNVACDSYHRYEEDIRLMK 69
Query: 729 DLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKLW-ITIKETL 787
+LG + YRFS+SW RI P GD ++N++G+ YY ++D L N I+P L+ + + L
Sbjct: 70 ELGIRTYRFSVSWPRIFPNGD-GEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQAL 128
Query: 788 EAMQGYD-------FKTYAPYL------------------------SMTGVGGEYL---- 812
+ G+ F +A + +M GV L
Sbjct: 129 QDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLTNLQ 188
Query: 813 ----AAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQ 868
H+LL +H + R + + G++ + N + P +S+ED+ A R I
Sbjct: 189 TAIDVGHHLLVAHGLSVRRFREL---GTSGQIGIAPNVSWAVPYS-TSEEDKAACARTIS 244
Query: 869 FKFGLFAHPIYSQAGDYP--------------------------PIVRQIVDQNSAKEGR 902
F PIY G YP PI ++ S R
Sbjct: 245 LHSDWFLQPIYQ--GSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYSMSVNR 302
Query: 903 ARSRLPRFTEEEIKALKGKTE-----------EEINALK---GKQKYLTALSKAIGEDKC 948
EEI T+ E ++ L+ Y+T I ++
Sbjct: 303 FNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYLQKYGNIDIYITENGACINDEVV 362
Query: 949 N-------------KYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGY 984
N ++L + + I D +V GY AWSLLDNFEW GY
Sbjct: 363 NGKVQDDRRISYMQQHLVQVHRTI-HDGLHVKGYMAWSLLDNFEWAEGY 410
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 89/183 (48%), Gaps = 21/183 (11%)
Query: 371 FSQDPNWPSSNSPWL---KVVPDGFRALLNWIKKEYNNPPVFITENG---------FSDD 418
F QD W ++ + + DG R L W + VF +NG + +D
Sbjct: 6 FPQDFMWGTATAAYQIEGAYQEDG-RGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEED 64
Query: 419 GRLDDEGRIDYYAFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVT 478
RL E + YRFS+SW RI P GD ++N++G+ YY ++D L N I+P T
Sbjct: 65 IRLMKE-----LGIRTYRFSVSWPRIFPNGD-GEVNQEGLDYYHRVVDLLNDNGIEPFCT 118
Query: 479 LYHWDLPQPLQDFGGWTNAIIADYFETYADFAYKTFGDK--KYLTAMQKALVNDKCNIIG 536
LYHWDLPQ LQD GGW N F +A+ ++ F K +LT + + N++G
Sbjct: 119 LYHWDLPQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLG 178
Query: 537 YTA 539
A
Sbjct: 179 VHA 181
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 6/56 (10%)
Query: 516 DKKYLTAMQKALV------NDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
D + ++ MQ+ LV +D ++ GY AWS+LDNFEW +GY RFG++HVDF +
Sbjct: 368 DDRRISYMQQHLVQVHRTIHDGLHVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFRT 423
>pdb|1BGA|A Chain A, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|B Chain B, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|C Chain C, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|D Chain D, Beta-Glucosidase A From Bacillus Polymyxa
Length = 447
Score = 209 bits (532), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 138/408 (33%), Positives = 213/408 (52%), Gaps = 36/408 (8%)
Query: 37 QFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKE 96
QFP F+WG +TAA+Q+EGA+ EDG+G +IWD HT P V + N +VACDSYH+Y+E
Sbjct: 4 QFPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHT-PGKVFNGDNGNVACDSYHRYEE 62
Query: 97 DVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHY 156
D+ L++++G + YRFS+SW RI P GD + +N++G+ YY +++ + I+P TL H+
Sbjct: 63 DIRLMKELGIRTYRFSVSWPRIFPNGDGE-VNQEGLDYYHRVVDLLNDNGIEPFCTLYHW 121
Query: 157 DLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGAPY 216
DLPQ LQ+ GGW N F FA+ F+ F K+ +W+T NEP + G
Sbjct: 122 DLPQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPW-CIAFLSNMLGVHA 180
Query: 217 LNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQE 276
L+ L V H+LL AH + R + + S G++ I + P+ +TS+ED+
Sbjct: 181 PGLTNLQTAIDVGHHLLVAHGLSVRRFRELGTS---GQIGIAPNVSWAVPY-STSEEDKA 236
Query: 277 AAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGS 336
A R F PIY G YP Q + A++G + +P + ++ +
Sbjct: 237 ACARTISLHSDWFLQPIYQ--GSYP----QFLVDWFAEQG---ATVP-IQDGDMDIIGEP 286
Query: 337 FDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRALL 396
D +N+Y+ + N IN D WP V G +L
Sbjct: 287 IDMIGINYYSMSVNRFNPEAGFLQSEEIN--MGLPVTDIGWP--------VESRGLYEVL 336
Query: 397 NWIKKEYNNPPVFITENG--FSDD---GRLDDEGRIDY---YAFQVYR 436
++++K Y N ++ITENG +D+ G++ D+ RI Y + QV+R
Sbjct: 337 HYLQK-YGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHR 383
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 164/409 (40%), Gaps = 102/409 (24%)
Query: 669 FWFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIK 728
W + + Y G+G +IWD HT P V + NG+VACDSYH+Y+ED+ ++K
Sbjct: 10 MWGTATAAYQIEGAYQEDGRGLSIWDTFAHT-PGKVFNGDNGNVACDSYHRYEEDIRLMK 68
Query: 729 DLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKLW-ITIKETL 787
+LG + YRFS+SW RI P GD ++N++G+ YY ++D L N I+P L+ + + L
Sbjct: 69 ELGIRTYRFSVSWPRIFPNGD-GEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQAL 127
Query: 788 EAMQGYD-------FKTYAPYL------------------------SMTGVGGEYL---- 812
+ G+ F +A + +M GV L
Sbjct: 128 QDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLTNLQ 187
Query: 813 ----AAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQ 868
H+LL +H + R + + G++ + N + P +S+ED+ A R I
Sbjct: 188 TAIDVGHHLLVAHGLSVRRFREL---GTSGQIGIAPNVSWAVPYS-TSEEDKAACARTIS 243
Query: 869 FKFGLFAHPIYSQAGDYP--------------------------PIVRQIVDQNSAKEGR 902
F PIY G YP PI ++ S R
Sbjct: 244 LHSDWFLQPIYQ--GSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYSMSVNR 301
Query: 903 ARSRLPRFTEEEIKALKGKTE-----------EEINALK---GKQKYLTALSKAIGEDKC 948
EEI T+ E ++ L+ Y+T I ++
Sbjct: 302 FNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYLQKYGNIDIYITENGACINDEVV 361
Query: 949 N-------------KYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGY 984
N ++L + + I D +V GY AWSLLDNFEW GY
Sbjct: 362 NGKVQDDRRISYMQQHLVQVHRTI-HDGLHVKGYMAWSLLDNFEWAEGY 409
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 89/183 (48%), Gaps = 21/183 (11%)
Query: 371 FSQDPNWPSSNSPWL---KVVPDGFRALLNWIKKEYNNPPVFITENG---------FSDD 418
F QD W ++ + + DG R L W + VF +NG + +D
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDG-RGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEED 63
Query: 419 GRLDDEGRIDYYAFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVT 478
RL E + YRFS+SW RI P GD ++N++G+ YY ++D L N I+P T
Sbjct: 64 IRLMKE-----LGIRTYRFSVSWPRIFPNGD-GEVNQEGLDYYHRVVDLLNDNGIEPFCT 117
Query: 479 LYHWDLPQPLQDFGGWTNAIIADYFETYADFAYKTFGDK--KYLTAMQKALVNDKCNIIG 536
LYHWDLPQ LQD GGW N F +A+ ++ F K +LT + + N++G
Sbjct: 118 LYHWDLPQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLG 177
Query: 537 YTA 539
A
Sbjct: 178 VHA 180
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 6/56 (10%)
Query: 516 DKKYLTAMQKALV------NDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
D + ++ MQ+ LV +D ++ GY AWS+LDNFEW +GY RFG++HVDF +
Sbjct: 367 DDRRISYMQQHLVQVHRTIHDGLHVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFRT 422
>pdb|1UYQ|A Chain A, Mutated B-Glucosidase A From Paenibacillus Polymyxa
Showing Increased Stability
Length = 447
Score = 209 bits (532), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 138/408 (33%), Positives = 213/408 (52%), Gaps = 36/408 (8%)
Query: 37 QFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKE 96
QFP F+WG +TAA+Q+EGA+ EDG+G +IWD HT P V + N +VACDSYH+Y+E
Sbjct: 4 QFPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHT-PGKVFNGDNGNVACDSYHRYEE 62
Query: 97 DVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHY 156
D+ L++++G + YRFS+SW RI P GD + +N++G+ YY +++ + I+P TL H+
Sbjct: 63 DIRLMKELGIRTYRFSVSWPRIFPNGDGE-VNQEGLDYYHRVVDLLNDNGIEPFCTLYHW 121
Query: 157 DLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGAPY 216
DLPQ LQ+ GGW N F FA+ F+ F K+ +W+T NEP + G
Sbjct: 122 DLPQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPW-CIAFLSNMLGVHA 180
Query: 217 LNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQE 276
L+ L V H+LL AH + R + + S G++ I + P+ +TS+ED+
Sbjct: 181 PGLTNLQTAIDVGHHLLVAHGLSVRRFRELGTS---GQIGIAPNVSWAVPY-STSEEDKA 236
Query: 277 AAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGS 336
A R F PIY G YP Q + A++G + +P + ++ +
Sbjct: 237 ACARTISLHSDWFLQPIYQ--GSYP----QFLVDWFAEQG---ATVP-IQDGDMDIIGEP 286
Query: 337 FDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRALL 396
D +N+Y+ + N IN D WP V G +L
Sbjct: 287 IDMIGINYYSMSVNRFNPEAGFLQSEEIN--MGLPVTDIGWP--------VESRGLYEVL 336
Query: 397 NWIKKEYNNPPVFITENG--FSDD---GRLDDEGRIDY---YAFQVYR 436
++++K Y N ++ITENG +D+ G++ D+ RI Y + QV+R
Sbjct: 337 HYLQK-YGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHR 383
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 165/409 (40%), Gaps = 102/409 (24%)
Query: 669 FWFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIK 728
W + + Y G+G +IWD HT P V + NG+VACDSYH+Y+ED+ ++K
Sbjct: 10 MWGTATAAYQIEGAYQEDGRGLSIWDTFAHT-PGKVFNGDNGNVACDSYHRYEEDIRLMK 68
Query: 729 DLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKLW-ITIKETL 787
+LG + YRFS+SW RI P GD ++N++G+ YY ++D L N I+P L+ + + L
Sbjct: 69 ELGIRTYRFSVSWPRIFPNGD-GEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQAL 127
Query: 788 EAMQGYD-------FKTYAPYL------------------------SMTGVGGEYL---- 812
+ G+ F +A + +M GV L
Sbjct: 128 QDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLTNLQ 187
Query: 813 ----AAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQ 868
H+LL +H + R + + G++ + N + P +S+ED+ A R I
Sbjct: 188 TAIDVGHHLLVAHGLSVRRFREL---GTSGQIGIAPNVSWAVPYS-TSEEDKAACARTIS 243
Query: 869 FKFGLFAHPIYSQAGDYP--------------------------PIVRQIVDQNSAKEGR 902
F PIY G YP PI ++ S R
Sbjct: 244 LHSDWFLQPIYQ--GSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYSMSVNR 301
Query: 903 ARSRLPRFTEEEIKALKGKTE-----------EEINALK---GKQKYLTALSKAIGEDKC 948
EEI T+ E ++ L+ Y+T I ++
Sbjct: 302 FNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYLQKYGNIDIYITENGACINDEVV 361
Query: 949 N-------------KYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGY 984
N ++L + +AI D +V GY AWSLLDNFEW GY
Sbjct: 362 NGKVQDDRRISYMQQHLVQVHRAI-HDGLHVKGYMAWSLLDNFEWAEGY 409
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 89/183 (48%), Gaps = 21/183 (11%)
Query: 371 FSQDPNWPSSNSPWL---KVVPDGFRALLNWIKKEYNNPPVFITENG---------FSDD 418
F QD W ++ + + DG R L W + VF +NG + +D
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDG-RGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEED 63
Query: 419 GRLDDEGRIDYYAFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVT 478
RL E + YRFS+SW RI P GD ++N++G+ YY ++D L N I+P T
Sbjct: 64 IRLMKE-----LGIRTYRFSVSWPRIFPNGD-GEVNQEGLDYYHRVVDLLNDNGIEPFCT 117
Query: 479 LYHWDLPQPLQDFGGWTNAIIADYFETYADFAYKTFGDK--KYLTAMQKALVNDKCNIIG 536
LYHWDLPQ LQD GGW N F +A+ ++ F K +LT + + N++G
Sbjct: 118 LYHWDLPQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLG 177
Query: 537 YTA 539
A
Sbjct: 178 VHA 180
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 6/56 (10%)
Query: 516 DKKYLTAMQKALV------NDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
D + ++ MQ+ LV +D ++ GY AWS+LDNFEW +GY RFG++HVDF +
Sbjct: 367 DDRRISYMQQHLVQVHRAIHDGLHVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFRT 422
>pdb|2O9P|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa
pdb|2O9T|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
Glucose
pdb|2Z1S|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa Complexed
With Cellotetraose
Length = 454
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 208/403 (51%), Gaps = 35/403 (8%)
Query: 34 NKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHK 93
N FP F+WG ST+++Q+EG +E G+ +IWD P V DVACD +H
Sbjct: 10 NTFIFPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQI-PGKVIGGDCGDVACDHFHH 68
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTL 153
+KEDV L++ +GF YRFS++W RI+P INE+G+ +Y +L++E+ + PM+TL
Sbjct: 69 FKEDVQLMKQLGFLHYRFSVAWPRIMPAAGI--INEEGLLFYEHLLDEIELAGLIPMLTL 126
Query: 154 NHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEP-LDVMGGYGYKS 212
H+DLPQ +++ GGW +F+++A V FG+++ +W TINEP + GYG
Sbjct: 127 YHWDLPQWIEDEGGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGE 186
Query: 213 GAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSK 272
AP + AH++L H A L+++K + GK+ ITL+ + +
Sbjct: 187 HAP--GHENWREAFTAAHHILMCHGIASNLHKEKGLT---GKIGITLN-MEHVDAASERP 240
Query: 273 EDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKA 332
ED AA R F FA P+++ G YP + + G + L +++
Sbjct: 241 EDVAAAIRRDGFINRWFAEPLFN--GKYPEDMVEWY-------GTYLNGLDFVQPGDMEL 291
Query: 333 LKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGF 392
++ DF +N+YT +I + N S ++ P ++ W ++ P+ F
Sbjct: 292 IQQPGDFLGINYYTRSIIRSTNDASLLQVEQVHMEE---------PVTDMGW-EIHPESF 341
Query: 393 RALLNWIKKEYNNP-PVFITENGFSD-----DGRLDDEGRIDY 429
LL I+K+++ P+ ITENG + +G+++D GR Y
Sbjct: 342 YKLLTRIEKDFSKGLPILITENGAAMRDELVNGQIEDTGRQRY 384
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 168/402 (41%), Gaps = 118/402 (29%)
Query: 686 SGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRIL 745
G+ +IWD P V+ GDVACD +H +KEDV ++K LGF YRFS++W RI+
Sbjct: 36 GGRTPSIWDTFCQI-PGKVIGGDCGDVACDHFHHFKEDVQLMKQLGFLHYRFSVAWPRIM 94
Query: 746 PTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL-------WI------TIKETLEAMQG 792
P I INE+G+ +Y +L+DE+ L + PM+ L WI T +ET++
Sbjct: 95 PAAGI--INEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQWIEDEGGWTQRETIQ---- 148
Query: 793 YDFKTYA-------------------PYL-SMTGVG-GE-----------YLAAHNLLRS 820
FKTYA PY S+ G G GE + AAH++L
Sbjct: 149 -HFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGHENWREAFTAAHHILMC 207
Query: 821 HAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSK--EDQEAAERYIQFKFGLFAHPI 878
H A L+++K GK+ +TLN +D +S+ ED AA R F FA P+
Sbjct: 208 HGIASNLHKEK---GLTGKIGITLNMEH---VDAASERPEDVAAAIRRDGFINRWFAEPL 261
Query: 879 YS------------------------------QAGDY-------PPIVRQIVDQNSAKEG 901
++ Q GD+ I+R D + +
Sbjct: 262 FNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFLGINYYTRSIIRSTNDASLLQVE 321
Query: 902 RARSRLP------RFTEEEIKALKGKTEEEINALKGKQKYLTALSKAIGEDKCN------ 949
+ P E L + E++ + KG +T A+ ++ N
Sbjct: 322 QVHMEEPVTDMGWEIHPESFYKLLTRIEKDFS--KGLPILITENGAAMRDELVNGQIEDT 379
Query: 950 ---KYLTALSKAIG---EDKCNVIGYTAWSLLDNFEWLCGYT 985
+Y+ KA E+ + GY WS LDNFEW GY+
Sbjct: 380 GRQRYIEEHLKACHRFIEEGGQLKGYFVWSFLDNFEWAWGYS 421
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
F YRFS++W RI+P I INE+G+ +Y +L+DE+ L + PM+TLYHWDLPQ ++D
Sbjct: 80 GFLHYRFSVAWPRIMPAAGI--INEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQWIED 137
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
GGWT +F+TYA FG++
Sbjct: 138 EGGWTQRETIQHFKTYASVIMDRFGER 164
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 515 GDKKYLTAMQKA---LVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
G ++Y+ KA + + + GY WS LDNFEW GY+ RFGIVH+++ +
Sbjct: 380 GRQRYIEEHLKACHRFIEEGGQLKGYFVWSFLDNFEWAWGYSKRFGIVHINYET 433
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 568 DYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDD--RKWPKGASFWLKVVPDGFRALL 625
D+ G+N+YT ++ NDA+++ + + P W ++ P+ F LL
Sbjct: 297 DFLGINYYTRSIIRST----------NDASLLQVEQVHMEEPVTDMGW-EIHPESFYKLL 345
Query: 626 NWIKKEYNNP-PVFITENGFSD-----DGQLDDQGR 655
I+K+++ P+ ITENG + +GQ++D GR
Sbjct: 346 TRIEKDFSKGLPILITENGAAMRDELVNGQIEDTGR 381
>pdb|2JIE|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
2- F-Glucose
Length = 454
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 208/403 (51%), Gaps = 35/403 (8%)
Query: 34 NKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHK 93
N FP F+WG ST+++Q+EG +E G+ +IWD P V DVACD +H
Sbjct: 10 NTFIFPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQI-PGKVIGGDCGDVACDHFHH 68
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTL 153
+KEDV L++ +GF YRFS++W RI+P INE+G+ +Y +L++E+ + PM+TL
Sbjct: 69 FKEDVQLMKQLGFLHYRFSVAWPRIMPAAGI--INEEGLLFYEHLLDEIELAGLIPMLTL 126
Query: 154 NHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEP-LDVMGGYGYKS 212
H+DLPQ +++ GGW +F+++A V FG+++ +W TINEP + GYG
Sbjct: 127 YHWDLPQWIEDEGGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGE 186
Query: 213 GAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSK 272
AP + AH++L H A L+++K + GK+ ITL+ + +
Sbjct: 187 HAP--GHENWREAFTAAHHILMCHGIASNLHKEKGLT---GKIGITLN-MEHVDAASERP 240
Query: 273 EDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKA 332
ED AA R F FA P+++ G YP + + G + L +++
Sbjct: 241 EDVAAAIRRDGFINRWFAEPLFN--GKYPEDMVEWY-------GTYLNGLDFVQPGDMEL 291
Query: 333 LKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGF 392
++ DF +N+YT +I + N S ++ P ++ W ++ P+ F
Sbjct: 292 IQQPGDFLGINYYTRSIIRSTNDASLLQVEQVHMEE---------PVTDMGW-EIHPESF 341
Query: 393 RALLNWIKKEYNNP-PVFITENGFSD-----DGRLDDEGRIDY 429
LL I+K+++ P+ ITENG + +G+++D GR Y
Sbjct: 342 YKLLTRIEKDFSKGLPILITENGAAMRDELVNGQIEDTGRHGY 384
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 169/403 (41%), Gaps = 120/403 (29%)
Query: 686 SGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRIL 745
G+ +IWD P V+ GDVACD +H +KEDV ++K LGF YRFS++W RI+
Sbjct: 36 GGRTPSIWDTFCQI-PGKVIGGDCGDVACDHFHHFKEDVQLMKQLGFLHYRFSVAWPRIM 94
Query: 746 PTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL-------WI------TIKETLEAMQG 792
P I INE+G+ +Y +L+DE+ L + PM+ L WI T +ET++
Sbjct: 95 PAAGI--INEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQWIEDEGGWTQRETIQ---- 148
Query: 793 YDFKTYA-------------------PYL-SMTGVG-GE-----------YLAAHNLLRS 820
FKTYA PY S+ G G GE + AAH++L
Sbjct: 149 -HFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGHENWREAFTAAHHILMC 207
Query: 821 HAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSK--EDQEAAERYIQFKFGLFAHPI 878
H A L+++K GK+ +TLN +D +S+ ED AA R F FA P+
Sbjct: 208 HGIASNLHKEK---GLTGKIGITLNMEH---VDAASERPEDVAAAIRRDGFINRWFAEPL 261
Query: 879 YS------------------------------QAGDY-------PPIVRQIVDQNSAKEG 901
++ Q GD+ I+R D + +
Sbjct: 262 FNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFLGINYYTRSIIRSTNDASLLQVE 321
Query: 902 RARSRLP------RFTEEEIKALKGKTEEEINALKGKQKYLTALSKAIGEDKCN------ 949
+ P E L + E++ + KG +T A+ ++ N
Sbjct: 322 QVHMEEPVTDMGWEIHPESFYKLLTRIEKDFS--KGLPILITENGAAMRDELVNGQIEDT 379
Query: 950 -------KYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++L A + I E+ + GY WS LDNFEW GY+
Sbjct: 380 GRHGYIEEHLKACHRFI-EEGGQLKGYFVWSFLDNFEWAWGYS 421
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
F YRFS++W RI+P I INE+G+ +Y +L+DE+ L + PM+TLYHWDLPQ ++D
Sbjct: 80 GFLHYRFSVAWPRIMPAAGI--INEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQWIED 137
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
GGWT +F+TYA FG++
Sbjct: 138 EGGWTQRETIQHFKTYASVIMDRFGER 164
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+++L A + + + + GY WS LDNFEW GY+ RFGIVH+++ +
Sbjct: 386 EEHLKACHR-FIEEGGQLKGYFVWSFLDNFEWAWGYSKRFGIVHINYET 433
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 568 DYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDD--RKWPKGASFWLKVVPDGFRALL 625
D+ G+N+YT ++ NDA+++ + + P W ++ P+ F LL
Sbjct: 297 DFLGINYYTRSIIRST----------NDASLLQVEQVHMEEPVTDMGW-EIHPESFYKLL 345
Query: 626 NWIKKEYNNP-PVFITENGFSD-----DGQLDDQGR 655
I+K+++ P+ ITENG + +GQ++D GR
Sbjct: 346 TRIEKDFSKGLPILITENGAAMRDELVNGQIEDTGR 381
>pdb|2O9R|A Chain A, Beta-Glucosidase B Complexed With Thiocellobiose
Length = 452
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 208/403 (51%), Gaps = 35/403 (8%)
Query: 34 NKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHK 93
N FP F+WG ST+++Q+EG +E G+ +IWD P V DVACD +H
Sbjct: 8 NTFIFPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQI-PGKVIGGDCGDVACDHFHH 66
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTL 153
+KEDV L++ +GF YRFS++W RI+P INE+G+ +Y +L++E+ + PM+TL
Sbjct: 67 FKEDVQLMKQLGFLHYRFSVAWPRIMPAAGI--INEEGLLFYEHLLDEIELAGLIPMLTL 124
Query: 154 NHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEP-LDVMGGYGYKS 212
H+DLPQ +++ GGW +F+++A V FG+++ +W TINEP + GYG
Sbjct: 125 YHWDLPQWIEDEGGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGE 184
Query: 213 GAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSK 272
AP + AH++L H A L+++K + GK+ ITL+ + +
Sbjct: 185 HAP--GHENWREAFTAAHHILMCHGIASNLHKEKGLT---GKIGITLN-MEHVDAASERP 238
Query: 273 EDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKA 332
ED AA R F FA P+++ G YP + + G + L +++
Sbjct: 239 EDVAAAIRRDGFINRWFAEPLFN--GKYPEDMVEWY-------GTYLNGLDFVQPGDMEL 289
Query: 333 LKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGF 392
++ DF +N+YT +I + N S ++ P ++ W ++ P+ F
Sbjct: 290 IQQPGDFLGINYYTRSIIRSTNDASLLQVEQVHMEE---------PVTDMGW-EIHPESF 339
Query: 393 RALLNWIKKEYNNP-PVFITENGFSD-----DGRLDDEGRIDY 429
LL I+K+++ P+ ITENG + +G+++D GR Y
Sbjct: 340 YKLLTRIEKDFSKGLPILITENGAAMRDELVNGQIEDTGRQRY 382
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 168/402 (41%), Gaps = 118/402 (29%)
Query: 686 SGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRIL 745
G+ +IWD P V+ GDVACD +H +KEDV ++K LGF YRFS++W RI+
Sbjct: 34 GGRTPSIWDTFCQI-PGKVIGGDCGDVACDHFHHFKEDVQLMKQLGFLHYRFSVAWPRIM 92
Query: 746 PTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKL-------WI------TIKETLEAMQG 792
P I INE+G+ +Y +L+DE+ L + PM+ L WI T +ET++
Sbjct: 93 PAAGI--INEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQWIEDEGGWTQRETIQ---- 146
Query: 793 YDFKTYA-------------------PYL-SMTGVG-GE-----------YLAAHNLLRS 820
FKTYA PY S+ G G GE + AAH++L
Sbjct: 147 -HFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGHENWREAFTAAHHILMC 205
Query: 821 HAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSK--EDQEAAERYIQFKFGLFAHPI 878
H A L+++K GK+ +TLN +D +S+ ED AA R F FA P+
Sbjct: 206 HGIASNLHKEK---GLTGKIGITLNMEH---VDAASERPEDVAAAIRRDGFINRWFAEPL 259
Query: 879 YS------------------------------QAGDY-------PPIVRQIVDQNSAKEG 901
++ Q GD+ I+R D + +
Sbjct: 260 FNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFLGINYYTRSIIRSTNDASLLQVE 319
Query: 902 RARSRLP------RFTEEEIKALKGKTEEEINALKGKQKYLTALSKAIGEDKCN------ 949
+ P E L + E++ + KG +T A+ ++ N
Sbjct: 320 QVHMEEPVTDMGWEIHPESFYKLLTRIEKDFS--KGLPILITENGAAMRDELVNGQIEDT 377
Query: 950 ---KYLTALSKAIG---EDKCNVIGYTAWSLLDNFEWLCGYT 985
+Y+ KA E+ + GY WS LDNFEW GY+
Sbjct: 378 GRQRYIEEHLKACHRFIEEGGQLKGYFVWSFLDNFEWAWGYS 419
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
F YRFS++W RI+P I INE+G+ +Y +L+DE+ L + PM+TLYHWDLPQ ++D
Sbjct: 78 GFLHYRFSVAWPRIMPAAGI--INEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQWIED 135
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
GGWT +F+TYA FG++
Sbjct: 136 EGGWTQRETIQHFKTYASVIMDRFGER 162
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 515 GDKKYLTAMQKA---LVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSS 566
G ++Y+ KA + + + GY WS LDNFEW GY+ RFGIVH+++ +
Sbjct: 378 GRQRYIEEHLKACHRFIEEGGQLKGYFVWSFLDNFEWAWGYSKRFGIVHINYETQ 432
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 568 DYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDD--RKWPKGASFWLKVVPDGFRALL 625
D+ G+N+YT ++ NDA+++ + + P W ++ P+ F LL
Sbjct: 295 DFLGINYYTRSIIRST----------NDASLLQVEQVHMEEPVTDMGW-EIHPESFYKLL 343
Query: 626 NWIKKEYNNP-PVFITENGFSD-----DGQLDDQGR 655
I+K+++ P+ ITENG + +GQ++D GR
Sbjct: 344 TRIEKDFSKGLPILITENGAAMRDELVNGQIEDTGR 379
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 134/408 (32%), Positives = 201/408 (49%), Gaps = 35/408 (8%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
FP GFLWG +TA++Q+EGA EDG+ +IWD T P V++ DVA D YH+++ED
Sbjct: 18 FPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYART-PGRVRNGDTGDVATDHYHRWRED 76
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYD 157
VAL+ ++G YRFSL+W RI PTG + +KG+ +YR L +E+L+K IQP+ TL H+D
Sbjct: 77 VALMAELGLGAYRFSLAWPRIQPTGRGPAL-QKGLDFYRRLADELLAKGIQPVATLYHWD 135
Query: 158 LPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGAPYL 217
LPQ L+ GGW A+ F +A +A GD+V W T+NEP GY SG
Sbjct: 136 LPQELENAGGWPERATAERFAEYAAIAADALGDRVKTWTTLNEPW-CSAFLGYGSGVHAP 194
Query: 218 NLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEA 277
+ AH+L H A + + + + S+TL+ + P S D +A
Sbjct: 195 GRTDPVAALRAAHHLNLGHGLAVQALRDRLPA--DAQCSVTLNIHHVRPLT-DSDADADA 251
Query: 278 AERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSF 337
R+ +F P+ G YP ++ K+ + + +++
Sbjct: 252 VRRIDALANRVFTGPMLQ--GAYP--------EDLVKDTAGLTDWSFVRDGDLRLAHQKL 301
Query: 338 DFFALNHYTSILIA----NNNHTSNA------PPSTINDRAATFSQDPNWPSSNSPWLKV 387
DF +N+Y+ L++ + H S+ P DR A F Q P + + V
Sbjct: 302 DFLGVNYYSPTLVSEADGSGTHNSDGHGRSAHSPWPGADRVA-FHQPPG--ETTAMGWAV 358
Query: 388 VPDGFRALLNWIKKEYNNPPVFITENG--FSD----DGRLDDEGRIDY 429
P G LL + ++ P+ ITENG F D +G ++D RI Y
Sbjct: 359 DPSGLYELLRRLSSDFPALPLVITENGAAFHDYADPEGNVNDPERIAY 406
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 109/268 (40%), Gaps = 53/268 (19%)
Query: 663 SVSFP--CFWFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKY 720
+++FP W + + G+ +IWD T P V + GDVA D YH++
Sbjct: 15 ALTFPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYART-PGRVRNGDTGDVATDHYHRW 73
Query: 721 KEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPM---- 776
+EDVA++ +LG YRFSL+W RI PTG + +KG+ +YR L DELL IQP+
Sbjct: 74 REDVALMAELGLGAYRFSLAWPRIQPTGRGPAL-QKGLDFYRRLADELLAKGIQPVATLY 132
Query: 777 -------------------------------------VKLWITIKET-LEAMQGYDFKTY 798
VK W T+ E A GY +
Sbjct: 133 HWDLPQELENAGGWPERATAERFAEYAAIAADALGDRVKTWTTLNEPWCSAFLGYGSGVH 192
Query: 799 APYLSMTGVGGEYLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKE 858
AP T AAH+L H A + + + ++TLN H PL S
Sbjct: 193 AP--GRTDPVAALRAAHHLNLGHGLAVQALRDRLP--ADAQCSVTLNIHHVRPLT-DSDA 247
Query: 859 DQEAAERYIQFKFGLFAHPIYSQAGDYP 886
D +A R +F P+ G YP
Sbjct: 248 DADAVRRIDALANRVFTGPMLQ--GAYP 273
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 434 VYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDFGG 493
YRFSL+W RI PTG + +KG+ +YR L DELL IQP+ TLYHWDLPQ L++ GG
Sbjct: 87 AYRFSLAWPRIQPTGRGPAL-QKGLDFYRRLADELLAKGIQPVATLYHWDLPQELENAGG 145
Query: 494 WTNAIIADYFETYADFAYKTFGDK 517
W A+ F YA A GD+
Sbjct: 146 WPERATAERFAEYAAIAADALGDR 169
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ +L A+ +A + D ++ GY WS+LDNFEW GY+ RFG V+VD+ +
Sbjct: 408 RDHLAAVHRA-IKDGSDVRGYFLWSLLDNFEWAHGYSKRFGAVYVDYPT 455
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 948 CNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
+L A+ +AI +D +V GY WSLLDNFEW GY+
Sbjct: 407 VRDHLAAVHRAI-KDGSDVRGYFLWSLLDNFEWAHGYS 443
>pdb|4F66|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate.
pdb|4F66|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate
Length = 480
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 138/427 (32%), Positives = 213/427 (49%), Gaps = 55/427 (12%)
Query: 37 QFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADV---------A 87
+ P FLWG + AA Q+EG W E GKG ++ D + + + ++ + A
Sbjct: 6 KLPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITAGVLEGKYYPNHEA 65
Query: 88 CDSYHKYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNI 147
D YH YKEDV L ++GF+ +R S++W+RI P GD NE G+Q+Y +L +E L I
Sbjct: 66 IDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGI 125
Query: 148 QPMVTLNHYDLPQPL-QEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMG 206
+P+VTL+H++LP L E+GG+ N V D+F FA+V F+ + DKV YW+T NE ++
Sbjct: 126 EPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNE-INNQA 184
Query: 207 GYGYKSGAPYLNLSGL----GGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSI 257
Y + AP+ N SG+ G D Y AH L A A+A ++ +L G
Sbjct: 185 NYQ-EDFAPFTN-SGIVYKEGDDREAIMYQAAHYELVASARAVKIGHAINPNLNIG---C 239
Query: 258 TLDSCNYYPHNATSKE---DQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAK 314
+ C YP K+ Q+A ++ + F + H G YP + + ++ + K
Sbjct: 240 MVAMCPIYPATCNPKDILMAQKAMQKRYYFA-DVHVH------GFYPEHIFKYWERKAIK 292
Query: 315 EGRARSRLPRFTEEEIKAL-KGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQ 373
FTE + K L +G+ D+ ++Y S +I + H N P + +
Sbjct: 293 --------VDFTERDKKDLFEGTVDYIGFSYYMSFVI--DAHRENNPYYDYLE-TEDLVK 341
Query: 374 DPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFS------DDGRLDDEGRI 427
+P +S+ W ++ P G R LNW Y + P+FI ENGF DG + D+ RI
Sbjct: 342 NPYVKASDWDW-QIDPQGLRYALNWFTDMY-HLPLFIVENGFGAIDQVEADGMVHDDYRI 399
Query: 428 DYYAFQV 434
DY +
Sbjct: 400 DYLGAHI 406
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPL-Q 489
F+ +R S++W+RI P GD + NE G+Q+Y +L DE L I+P+VTL H++LP L
Sbjct: 83 GFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYHLVT 142
Query: 490 DFGGWTNAIIADYFETYADFAYKTFGDK-KYLTAMQKALVNDKCN 533
++GG+TN + D+F +A+ ++ + DK KY + +N++ N
Sbjct: 143 EYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNE--INNQAN 185
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 713 ACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNN 772
A D YH YKEDV + ++GF+ +R S++W+RI P GD + NE G+Q+Y +L DE L
Sbjct: 65 AIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYG 124
Query: 773 IQPMVKL 779
I+P+V L
Sbjct: 125 IEPVVTL 131
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 563 FSSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFR 622
F + DY G ++Y SF++ E +P + ++V + K + + ++ P G R
Sbjct: 304 FEGTVDYIGFSYYMSFVIDAHRENNPYYDYLETEDLV---KNPYVKASDWDWQIDPQGLR 360
Query: 623 ALLNWIKKEYNNPPVFITENGFS------DDGQLDDQGRVDF 658
LNW Y + P+FI ENGF DG + D R+D+
Sbjct: 361 YALNWFTDMY-HLPLFIVENGFGAIDQVEADGMVHDDYRIDY 401
>pdb|4F79|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase Mutant
(E375q) In Complex With Salicin 6-Phosphate
pdb|4GPN|A Chain A, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate.
pdb|4GPN|B Chain B, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate
Length = 480
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/427 (32%), Positives = 213/427 (49%), Gaps = 55/427 (12%)
Query: 37 QFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADV---------A 87
+ P FLWG + AA Q+EG W E GKG ++ D + + + ++ + A
Sbjct: 6 KLPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITAGVLEGKYYPNHEA 65
Query: 88 CDSYHKYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNI 147
D YH YKEDV L ++GF+ +R S++W+RI P GD NE G+Q+Y +L +E L I
Sbjct: 66 IDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGI 125
Query: 148 QPMVTLNHYDLPQPL-QEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMG 206
+P+VTL+H++LP L E+GG+ N V D+F FA+V F+ + DKV YW+T NE ++
Sbjct: 126 EPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNE-INNQA 184
Query: 207 GYGYKSGAPYLNLSGL----GGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSI 257
Y + AP+ N SG+ G D Y AH L A A+A ++ +L G
Sbjct: 185 NYQ-EDFAPFTN-SGIVYKEGDDREAIMYQAAHYELVASARAVKIGHAINPNLNIG---C 239
Query: 258 TLDSCNYYPHNATSKE---DQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAK 314
+ C YP K+ Q+A ++ + F + H G YP + + ++ + K
Sbjct: 240 MVAMCPIYPATCNPKDILMAQKAMQKRYYFA-DVHVH------GFYPEHIFKYWERKAIK 292
Query: 315 EGRARSRLPRFTEEEIKAL-KGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQ 373
FTE + K L +G+ D+ ++Y S +I + H N P + +
Sbjct: 293 --------VDFTERDKKDLFEGTVDYIGFSYYMSFVI--DAHRENNPYYDYLE-TEDLVK 341
Query: 374 DPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFS------DDGRLDDEGRI 427
+P +S+ W ++ P G R LNW Y + P+FI +NGF DG + D+ RI
Sbjct: 342 NPYVKASDWDW-QIDPQGLRYALNWFTDMY-HLPLFIVQNGFGAIDQVEADGMVHDDYRI 399
Query: 428 DYYAFQV 434
DY +
Sbjct: 400 DYLGAHI 406
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPL-Q 489
F+ +R S++W+RI P GD + NE G+Q+Y +L DE L I+P+VTL H++LP L
Sbjct: 83 GFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYHLVT 142
Query: 490 DFGGWTNAIIADYFETYADFAYKTFGDK-KYLTAMQKALVNDKCN 533
++GG+TN + D+F +A+ ++ + DK KY + +N++ N
Sbjct: 143 EYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNE--INNQAN 185
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 713 ACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNN 772
A D YH YKEDV + ++GF+ +R S++W+RI P GD + NE G+Q+Y +L DE L
Sbjct: 65 AIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYG 124
Query: 773 IQPMVKL 779
I+P+V L
Sbjct: 125 IEPVVTL 131
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 563 FSSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFR 622
F + DY G ++Y SF++ E +P + ++V + K + + ++ P G R
Sbjct: 304 FEGTVDYIGFSYYMSFVIDAHRENNPYYDYLETEDLV---KNPYVKASDWDWQIDPQGLR 360
Query: 623 ALLNWIKKEYNNPPVFITENGFS------DDGQLDDQGRVDF 658
LNW Y + P+FI +NGF DG + D R+D+
Sbjct: 361 YALNWFTDMY-HLPLFIVQNGFGAIDQVEADGMVHDDYRIDY 401
>pdb|3PN8|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
pdb|3PN8|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
Length = 480
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/427 (32%), Positives = 210/427 (49%), Gaps = 55/427 (12%)
Query: 37 QFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADV---------A 87
+ P FLWG + AA Q+EG W E GKG ++ D + + ++ + A
Sbjct: 6 KLPENFLWGGAVAAHQLEGGWQEGGKGISVADVXTAGRHGVAREITAGVLEGKYYPNHEA 65
Query: 88 CDSYHKYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNI 147
D YH YKEDV L + GF+ +R S++W+RI P GD NE G+Q+Y +L +E L I
Sbjct: 66 IDFYHHYKEDVKLFAEXGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGI 125
Query: 148 QPMVTLNHYDLPQPL-QEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMG 206
+P+VTL+H++LP L E+GG+ N V D+F FA+V F+ + DKV YW T NE ++
Sbjct: 126 EPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWXTFNE-INNQA 184
Query: 207 GYGYKSGAPYLNLSGL----GGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSI 257
Y + AP+ N SG+ G D Y AH L A A+A ++ +L G
Sbjct: 185 NYQ-EDFAPFTN-SGIVYKEGDDREAIXYQAAHYELVASARAVKIGHAINPNLNIG---C 239
Query: 258 TLDSCNYYPHNATSKE---DQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAK 314
+ C YP K+ Q+A ++ + F + H G YP + + ++ + K
Sbjct: 240 XVAXCPIYPATCNPKDILXAQKAXQKRYYFA-DVHVH------GFYPEHIFKYWERKAIK 292
Query: 315 EGRARSRLPRFTEEEIKAL-KGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQ 373
FTE + K L +G+ D+ ++Y S +I + H N P + +
Sbjct: 293 --------VDFTERDKKDLFEGTVDYIGFSYYXSFVI--DAHRENNPYYDYLE-TEDLVK 341
Query: 374 DPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFS------DDGRLDDEGRI 427
+P +S+ W ++ P G R LNW Y + P+FI ENGF DG + D+ RI
Sbjct: 342 NPYVKASDWDW-QIDPQGLRYALNWFTDXY-HLPLFIVENGFGAIDQVEADGXVHDDYRI 399
Query: 428 DYYAFQV 434
DY +
Sbjct: 400 DYLGAHI 406
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPL-Q 489
F+ +R S++W+RI P GD + NE G+Q+Y +L DE L I+P+VTL H++LP L
Sbjct: 83 GFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYHLVT 142
Query: 490 DFGGWTNAIIADYFETYADFAYKTFGDK-KYLTAMQKALVNDKCN 533
++GG+TN + D+F +A+ ++ + DK KY + +N++ N
Sbjct: 143 EYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWXTFNE--INNQAN 185
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 713 ACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNN 772
A D YH YKEDV + + GF+ +R S++W+RI P GD + NE G+Q+Y +L DE L
Sbjct: 65 AIDFYHHYKEDVKLFAEXGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYG 124
Query: 773 IQPMVKL 779
I+P+V L
Sbjct: 125 IEPVVTL 131
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 563 FSSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFR 622
F + DY G ++Y SF++ E +P + ++V + + K + + ++ P G R
Sbjct: 304 FEGTVDYIGFSYYXSFVIDAHRENNPYYDYLETEDLVKN---PYVKASDWDWQIDPQGLR 360
Query: 623 ALLNWIKKEYNNPPVFITENGFS------DDGQLDDQGRVDF 658
LNW Y + P+FI ENGF DG + D R+D+
Sbjct: 361 YALNWFTDXY-HLPLFIVENGFGAIDQVEADGXVHDDYRIDY 401
>pdb|1NP2|A Chain A, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
pdb|1NP2|B Chain B, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
Length = 436
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 194/399 (48%), Gaps = 46/399 (11%)
Query: 42 FLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKEDVALI 101
FLWG +T+A+Q+EGA EDG+G +IWD +P ++D + ACD YH+Y+ED+AL+
Sbjct: 8 FLWGVATSAYQIEGATQEDGRGPSIWDTFAR-RPGAIRDGSTGEPACDHYHRYEEDIALM 66
Query: 102 RDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYDLPQP 161
+ +G VYRFS++W RILP G RIN KG+ +Y L++ +L+ I P +TL H+DLPQ
Sbjct: 67 QSLGVGVYRFSVAWPRILPEG-RGRINPKGLAFYDRLVDRLLAAGITPFLTLYHWDLPQA 125
Query: 162 LQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGAPYLNLSG 221
L++ GGW + A F +A+ + D+VP++ T+NEP G+ +G L
Sbjct: 126 LEDRGGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPW-CSAFLGHWTGEHAPGLRN 184
Query: 222 LGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERV 281
L AH+LL H A + ++ +V I L+ Y ED EA +
Sbjct: 185 LEAALRAAHHLLLGHGLAV----EALRAAGARRVGIVLNFAPAY------GEDPEAVDVA 234
Query: 282 FQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFA 341
++ F PI YP Q D A +++A+ DF
Sbjct: 235 DRYHNRYFLDPILGRG--YPESPFQ--DPPPAP----------ILSRDLEAIARPLDFLG 280
Query: 342 LNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRALLNWIKK 401
+N+Y + +A T P + P P + W +V P+G LL + +
Sbjct: 281 VNYYAPVRVAPG--TGPLPVRYL---------PPEGPVTAMGW-EVYPEGLYHLLKRLGR 328
Query: 402 EYNNPPVFITENG------FSDDGRLDDEGRIDYYAFQV 434
E P++ITENG ++ + ++D R+ Y V
Sbjct: 329 EVPW-PLYITENGAAYPDLWTGEAVVEDPERVAYLEAHV 366
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+G +IWD P A+ D G+ ACD YH+Y+ED+A+++ LG VYRFS++W RILP
Sbjct: 27 GRGPSIWDTFAR-RPGAIRDGSTGEPACDHYHRYEEDIALMQSLGVGVYRFSVAWPRILP 85
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPMVKLW 780
G +IN KG+ +Y L+D LL I P + L+
Sbjct: 86 EGR-GRINPKGLAFYDRLVDRLLAAGITPFLTLY 118
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 434 VYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDFGG 493
VYRFS++W RILP G +IN KG+ +Y L+D LL I P +TLYHWDLPQ L+D GG
Sbjct: 73 VYRFSVAWPRILPEGR-GRINPKGLAFYDRLVDRLLAAGITPFLTLYHWDLPQALEDRGG 131
Query: 494 WTN 496
W +
Sbjct: 132 WRS 134
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 519 YLTAMQKALVNDK---CNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
YL A +A + + ++ GY WS++DNFEW GYT RFG+ +VDF S
Sbjct: 361 YLEAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRRFGLYYVDFPS 410
>pdb|3ZJK|A Chain A, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|B Chain B, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|C Chain C, Crystal Structure Of Ttb-gly F401s Mutant
Length = 431
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 194/405 (47%), Gaps = 58/405 (14%)
Query: 42 FLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKEDVALI 101
FLWG +T+A+Q+EGA EDG+G +IWD +P ++D + ACD Y +Y+ED+AL+
Sbjct: 8 FLWGVATSAYQIEGATQEDGRGPSIWDAFAQ-RPGAIRDGSTGEPACDHYRRYEEDIALM 66
Query: 102 RDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYDLPQP 161
+ +G + YRFS++W RILP G RIN KG+ +Y L++ +L+ I P +TL H+DLP
Sbjct: 67 QSLGVRAYRFSVAWPRILPEG-RGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLA 125
Query: 162 LQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGAPYLNLSG 221
L+E GGW + A F +A+ + D+VP++ T+NEP G+ +G L
Sbjct: 126 LEERGGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPW-CSAFLGHWTGEHAPGLRN 184
Query: 222 LGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERV 281
L AH+LL H A + ++ +V I L+ Y ED EA +
Sbjct: 185 LEAALRAAHHLLLGHGLAV----EALRAAGARRVGIVLNFAPAY------GEDPEAVDVA 234
Query: 282 FQFTLGLFAHPI----YSEAG--DYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 335
++ F PI Y E+ D PP+ +++ +
Sbjct: 235 DRYHNRFFLDPILGKGYPESPFRDPPPVP--------------------ILSRDLELVAR 274
Query: 336 SFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRAL 395
DF +N+Y + +A T P + P P++ W +V P+G L
Sbjct: 275 PLDFLGVNYYAPVRVAPG--TGTLPVRYL---------PPEGPATAMGW-EVYPEGLHHL 322
Query: 396 LNWIKKEYNNPPVFITENG------FSDDGRLDDEGRIDYYAFQV 434
L + +E P+++TENG ++ + ++D R+ Y V
Sbjct: 323 LKRLGREVPW-PLYVTENGAAYPDLWTGEAVVEDPERVAYLEAHV 366
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+G +IWD P A+ D G+ ACD Y +Y+ED+A+++ LG + YRFS++W RILP
Sbjct: 27 GRGPSIWDAFAQ-RPGAIRDGSTGEPACDHYRRYEEDIALMQSLGVRAYRFSVAWPRILP 85
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPMVKLW 780
G +IN KG+ +Y L+D LL + I P + L+
Sbjct: 86 EGR-GRINPKGLAFYDRLVDRLLASGITPFLTLY 118
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 422 DDEGRIDYYAFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYH 481
+D + + YRFS++W RILP G +IN KG+ +Y L+D LL + I P +TLYH
Sbjct: 61 EDIALMQSLGVRAYRFSVAWPRILPEGR-GRINPKGLAFYDRLVDRLLASGITPFLTLYH 119
Query: 482 WDLPQPLQDFGGWTN 496
WDLP L++ GGW +
Sbjct: 120 WDLPLALEERGGWRS 134
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 519 YLTAMQKALVNDK---CNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
YL A +A + + ++ GY WS++DNFEW GYT R G+ +VDF S
Sbjct: 361 YLEAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRRSGLYYVDFPS 410
Score = 36.6 bits (83), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 961 EDKCNVIGYTAWSLLDNFEWLCGYT 985
E+ ++ GY WSL+DNFEW GYT
Sbjct: 374 EEGVDLRGYFVWSLMDNFEWAFGYT 398
>pdb|1UG6|A Chain A, Structure Of Beta-Glucosidase At Atomic Resolution From
Thermus Thermophilus Hb8
Length = 431
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 194/405 (47%), Gaps = 58/405 (14%)
Query: 42 FLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKEDVALI 101
FLWG +T+A+Q+EGA EDG+G +IWD +P ++D + ACD Y +Y+ED+AL+
Sbjct: 8 FLWGVATSAYQIEGATQEDGRGPSIWDAFAQ-RPGAIRDGSTGEPACDHYRRYEEDIALM 66
Query: 102 RDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYDLPQP 161
+ +G + YRFS++W RILP G RIN KG+ +Y L++ +L+ I P +TL H+DLP
Sbjct: 67 QSLGVRAYRFSVAWPRILPEG-RGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLA 125
Query: 162 LQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGAPYLNLSG 221
L+E GGW + A F +A+ + D+VP++ T+NEP G+ +G L
Sbjct: 126 LEERGGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPW-CSAFLGHWTGEHAPGLRN 184
Query: 222 LGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERV 281
L AH+LL H A + ++ +V I L+ Y ED EA +
Sbjct: 185 LEAALRAAHHLLLGHGLAV----EALRAAGARRVGIVLNFAPAY------GEDPEAVDVA 234
Query: 282 FQFTLGLFAHPI----YSEAG--DYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 335
++ F PI Y E+ D PP+ +++ +
Sbjct: 235 DRYHNRFFLDPILGKGYPESPFRDPPPVP--------------------ILSRDLELVAR 274
Query: 336 SFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRAL 395
DF +N+Y + +A T P + P P++ W +V P+G L
Sbjct: 275 PLDFLGVNYYAPVRVAPG--TGTLPVRYL---------PPEGPATAMGW-EVYPEGLYHL 322
Query: 396 LNWIKKEYNNPPVFITENG------FSDDGRLDDEGRIDYYAFQV 434
L + +E P+++TENG ++ + ++D R+ Y V
Sbjct: 323 LKRLGREVPW-PLYVTENGAAYPDLWTGEAVVEDPERVAYLEAHV 366
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+G +IWD P A+ D G+ ACD Y +Y+ED+A+++ LG + YRFS++W RILP
Sbjct: 27 GRGPSIWDAFAQ-RPGAIRDGSTGEPACDHYRRYEEDIALMQSLGVRAYRFSVAWPRILP 85
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPMVKLW 780
G +IN KG+ +Y L+D LL + I P + L+
Sbjct: 86 EGR-GRINPKGLAFYDRLVDRLLASGITPFLTLY 118
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 422 DDEGRIDYYAFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYH 481
+D + + YRFS++W RILP G +IN KG+ +Y L+D LL + I P +TLYH
Sbjct: 61 EDIALMQSLGVRAYRFSVAWPRILPEGR-GRINPKGLAFYDRLVDRLLASGITPFLTLYH 119
Query: 482 WDLPQPLQDFGGWTN 496
WDLP L++ GGW +
Sbjct: 120 WDLPLALEERGGWRS 134
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 519 YLTAMQKALVNDK---CNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
YL A +A + + ++ GY WS++DNFEW GYT RFG+ +VDF S
Sbjct: 361 YLEAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRRFGLYYVDFPS 410
Score = 36.6 bits (83), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 961 EDKCNVIGYTAWSLLDNFEWLCGYT 985
E+ ++ GY WSL+DNFEW GYT
Sbjct: 374 EEGVDLRGYFVWSLMDNFEWAFGYT 398
>pdb|2XHY|A Chain A, Crystal Structure Of E.Coli Bgla
pdb|2XHY|B Chain B, Crystal Structure Of E.Coli Bgla
pdb|2XHY|C Chain C, Crystal Structure Of E.Coli Bgla
pdb|2XHY|D Chain D, Crystal Structure Of E.Coli Bgla
Length = 479
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 200/428 (46%), Gaps = 61/428 (14%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLV---HTQP-DLVKDRQNADV-- 86
+ K P FLWG + AA QVEG WN+ GKG +I D L H P ++ K+
Sbjct: 3 VKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYP 62
Query: 87 ---ACDSYHKYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVL 143
A D Y YKED+ L ++GF+ +R S++W+RI P GD + NE+G+++Y ++ +E+L
Sbjct: 63 NHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELL 122
Query: 144 SKNIQPMVTLNHYDLPQPL-QEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINE-- 200
NI+P++TL+H+++P L Q++G W N V D+F FA+V F+ + KV YW+T NE
Sbjct: 123 KYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEIN 182
Query: 201 -------PLDVMGGYGY-KSGAPYLNLSGLGGD-YLVAHNLLRAHAKAYRLYEKKYKSLQ 251
PL +GY SG Y Y V H+ A A A + + +
Sbjct: 183 NQRNWRAPL-----FGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEM- 236
Query: 252 KGKVSITLDSCNYYPHNATSKE---DQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIV 308
KV L YP++ + QE+ + FT G YP V
Sbjct: 237 --KVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFT-------DVQLRGYYPSYV---- 283
Query: 309 DQNSAKEGRARSRLPRFTEEEIKALK-GSFDFFALNHYTSILIANNNHTSNAPPSTINDR 367
E R + + ++ L+ G+ D+ ++Y + + T +A
Sbjct: 284 ----LNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISGFEGSV 339
Query: 368 AATFSQDPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFS------DDGRL 421
+ + +W W ++ P G R L + + Y P+FI ENGF +DG +
Sbjct: 340 PNPYVKASDW-----GW-QIDPVGLRYALCELYERYQR-PLFIVENGFGAYDKVEEDGSI 392
Query: 422 DDEGRIDY 429
+D+ RIDY
Sbjct: 393 NDDYRIDY 400
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPL-Q 489
F+ +R S++W+RI P GD + NE+G+++Y ++ DELL NI+P++TL H+++P L Q
Sbjct: 84 GFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQ 143
Query: 490 DFGGWTNAIIADYFETYADFAYKTFGDK 517
+G WTN + D+F +A+ ++ + K
Sbjct: 144 QYGSWTNRKVVDFFVRFAEVVFERYKHK 171
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 48/67 (71%)
Query: 713 ACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNN 772
A D Y YKED+ + ++GF+ +R S++W+RI P GD + NE+G+++Y ++ DELL N
Sbjct: 66 AVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYN 125
Query: 773 IQPMVKL 779
I+P++ L
Sbjct: 126 IEPVITL 132
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDG-YTCRFGIVHVD 562
+ ++ M+KA+ D +++GYT W +D + G Y+ R+G ++V+
Sbjct: 402 RAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVN 448
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 522 AMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRF--GIVHVDFSSSFDYFGLNHYTSFL 579
+M++ V + GY +L+ +E G+ + G + V + DY G ++Y +
Sbjct: 263 SMRERYVFTDVQLRGYYPSYVLNEWE-RRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNA 321
Query: 580 VSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRALLNWIKKEYNNPPVFI 639
V K E + V + + K + + ++ P G R L + + Y P +FI
Sbjct: 322 V--KAEGGTGDAISGFEGSVPN---PYVKASDWGWQIDPVGLRYALCELYERYQRP-LFI 375
Query: 640 TENGFS------DDGQLDDQGRVDF 658
ENGF +DG ++D R+D+
Sbjct: 376 VENGFGAYDKVEEDGSINDDYRIDY 400
>pdb|4B3K|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
Length = 479
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 191/410 (46%), Gaps = 20/410 (4%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
FP F WG +T+ Q EG + + + N++D+ +PDL D D A D+YH+ + D
Sbjct: 3 FPKEFWWGGATSGPQSEGRFAKQHR--NLFDYWYEEEPDLFYDYVGPDTASDAYHQIESD 60
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYD 157
+ L+ +G YR S+ W+R++ + IN G+ YY +I+ L+ I+P++ L+H+D
Sbjct: 61 LTLLASLGHNSYRTSIQWTRLIDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHHFD 120
Query: 158 LPQPL-QEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGAPY 216
LP L Q +GGW + V D F +F+ V F+ FGD+V W NEP+ V+ G Y Y
Sbjct: 121 LPIALYQAYGGWESKHVVDLFVAFSKVCFEQFGDRVKDWFVHNEPMVVVEG-SYLMQFHY 179
Query: 217 LNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQE 276
+ VA+NL A AK + Y + L G++ L+ YP + S+ D
Sbjct: 180 PAIVDGKKAVQVAYNLALATAKVIQAYRRGPAELSDGRIGTILNLTPAYP-ASQSEADMA 238
Query: 277 AAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKAL-KG 335
AA + LF + G +P + ++ ++ L + T EE+ + +
Sbjct: 239 AAHFAELWNNDLFMEA--AVHGKFPEELVAVLKKDGV--------LWQSTPEELALIAEN 288
Query: 336 SFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRAL 395
D+ LN Y + + PS + P + ++ P+ +
Sbjct: 289 RVDYLGLNFYHPKRVKAPDAIPVISPSWSPEWYYDPYLMPGRRMNVDKGWEIYPEAVYDI 348
Query: 396 LNWIKKEYNNPPVFITENGF---SDDGRLDDEGRI-DYYAFQVYRFSLSW 441
++ Y+N P F++ENG +D D+ G+I D Y Q + L++
Sbjct: 349 AIKMRDHYDNIPWFLSENGVGISGEDRYRDETGQIQDDYRIQFLKEHLTY 398
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 435 YRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPL-QDFGG 493
YR S+ W+R++ + IN G+ YY +ID L N I+P++ L+H+DLP L Q +GG
Sbjct: 72 YRTSIQWTRLIDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHHFDLPIALYQAYGG 131
Query: 494 WTNAIIADYFETYADFAYKTFGDK 517
W + + D F ++ ++ FGD+
Sbjct: 132 WESKHVVDLFVAFSKVCFEQFGDR 155
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%)
Query: 691 NIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILPTGDI 750
N++D P D D A D+YH+ + D+ ++ LG YR S+ W+R++ +
Sbjct: 28 NLFDYWYEEEPDLFYDYVGPDTASDAYHQIESDLTLLASLGHNSYRTSIQWTRLIDDFEQ 87
Query: 751 DKINEKGVQYYRNLIDELLLNNIQPMVKL 779
IN G+ YY +ID L N I+P++ L
Sbjct: 88 ATINPDGLAYYNRVIDACLANGIRPVINL 116
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIV 559
K++LT + K + N GY W+ +D + WL+ Y R+G+V
Sbjct: 393 KEHLTYLHKG-IEAGSNCFGYHVWTPIDGWSWLNAYKNRYGLV 434
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 34/136 (25%)
Query: 568 DYFGLNHYTSFLVSKK-----TEPSPEPSFRNDANVV----LSDDRKWPKGASFWLKVVP 618
DY GLN Y V PS P + D ++ ++ D+ W ++ P
Sbjct: 291 DYLGLNFYHPKRVKAPDAIPVISPSWSPEWYYDPYLMPGRRMNVDKGW--------EIYP 342
Query: 619 DGFRALLNWIKKEYNNPPVFITENGFS---------DDGQLDDQGRVDF--------YQG 661
+ + ++ Y+N P F++ENG + GQ+ D R+ F ++G
Sbjct: 343 EAVYDIAIKMRDHYDNIPWFLSENGVGISGEDRYRDETGQIQDDYRIQFLKEHLTYLHKG 402
Query: 662 LSVSFPCFWFMVNVPF 677
+ CF + V P
Sbjct: 403 IEAGSNCFGYHVWTPI 418
>pdb|3QOM|A Chain A, Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Lactobacillus Plantarum
pdb|4GZE|A Chain A, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|B Chain B, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|C Chain C, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|D Chain D, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|E Chain E, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|F Chain F, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
Length = 481
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/429 (30%), Positives = 197/429 (45%), Gaps = 53/429 (12%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDG---KGENIWDHLVHTQPDLVKDRQNA------DVAC 88
FP GFLWG + AA Q+EG + E G +I + +P + D A A
Sbjct: 11 FPEGFLWGGAVAAHQLEGGYKEGGKGLSTADIXTLGTNERPREITDGVVAGKYYPNHQAI 70
Query: 89 DSYHKYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQ 148
D YH+Y ED+ L + GF+ +R S++W+RI P GD NE G+Q+Y +L +E L IQ
Sbjct: 71 DFYHRYPEDIELFAEXGFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQ 130
Query: 149 PMVTLNHYDLPQPL-QEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGG 207
P+VTL H++ P L +++GGW N + ++ +FA V F+ + DKV YW T NE +
Sbjct: 131 PVVTLAHFEXPYHLVKQYGGWRNRKLIQFYLNFAKVCFERYRDKVTYWXTFNE---INNQ 187
Query: 208 YGYKSGAPYLNLSGLGGD---------YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSIT 258
++S L SG+ Y AH L A A A +L + Q G
Sbjct: 188 TNFESDGAXLTDSGIIHQPGENRERWXYQAAHYELVASAAAVQLGHQINPDFQIG---CX 244
Query: 259 LDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRA 318
+ C YP A + D A+R Q T FA + G YP +R +
Sbjct: 245 IAXCPIYPLTA-APADVLFAQRAXQ-TRFYFADVHCN--GTYPQWLRNRFESEHFN---- 296
Query: 319 RSRLPRFTEEEIKALK-GSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNW 377
T E++K L+ G+ D+ ++Y S + + + + ++P
Sbjct: 297 ----LDITAEDLKILQAGTVDYIGFSYYXSFTVKDTGKLA-------YNEEHDLVKNPYV 345
Query: 378 PSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGF------SDDGRLDDEGRIDYYA 431
+S+ W +V P G R NW Y + P+FI ENG + D ++ D+ RIDY
Sbjct: 346 KASDWGW-QVDPVGLRYAXNWFTDRY-HLPLFIVENGLGAIDKKTADNQIHDDYRIDYLT 403
Query: 432 FQVYRFSLS 440
+ + L+
Sbjct: 404 DHLRQIKLA 412
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPL-Q 489
F+ +R S++W+RI P GD + NE G+Q+Y +L DE L N IQP+VTL H++ P L +
Sbjct: 87 GFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAHFEXPYHLVK 146
Query: 490 DFGGWTNAIIADYFETYADFAYKTFGDK 517
+GGW N + ++ +A ++ + DK
Sbjct: 147 QYGGWRNRKLIQFYLNFAKVCFERYRDK 174
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 713 ACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNN 772
A D YH+Y ED+ + + GF+ +R S++W+RI P GD + NE G+Q+Y +L DE L N
Sbjct: 69 AIDFYHRYPEDIELFAEXGFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNG 128
Query: 773 IQPMVKL 779
IQP+V L
Sbjct: 129 IQPVVTL 135
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 14/101 (13%)
Query: 564 SSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRA 623
+ + DY G ++Y SF V + + + ++ + ++V + K + + +V P G R
Sbjct: 309 AGTVDYIGFSYYXSFTV----KDTGKLAYNEEHDLV---KNPYVKASDWGWQVDPVGLRY 361
Query: 624 LLNWIKKEYNNPPVFITENGF------SDDGQLDDQGRVDF 658
NW Y + P+FI ENG + D Q+ D R+D+
Sbjct: 362 AXNWFTDRY-HLPLFIVENGLGAIDKKTADNQIHDDYRIDY 401
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 182/408 (44%), Gaps = 31/408 (7%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
P F++G +TAA+Q EGA + DGKG WD + A+ A D YHKY D
Sbjct: 5 LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNY-----WYTAEPASDFYHKYPVD 59
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYD 157
+ L + G R S++WSRI PTG +NEKGV++Y L E ++++P VTL+H+D
Sbjct: 60 LELAEEYGVNGIRISIAWSRIFPTG-YGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFD 118
Query: 158 LPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGAPYL 217
P+ L G + N ++F +A F+ F +V YW T NE + G P
Sbjct: 119 TPEALHSNGDFLNRENIEHFIDYAAFCFEEF-PEVNYWTTFNEIGPIGDGQYLVGKFPPG 177
Query: 218 NLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEA 277
L + HN++ +HA+A +LY+ K KG++ + YP++ + D A
Sbjct: 178 IKYDLAKVFQSHHNMMVSHARAVKLYKDK---GYKGEIGVVHALPTKYPYDPENPADVRA 234
Query: 278 AERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSF 337
AE Y G Y + V+ A+ G L + + A K
Sbjct: 235 AELEDIIHNKFILDATY--LGHYSDKTMEGVNHILAENG-GELDLRDEDFQALDAAKDLN 291
Query: 338 DFFALNHYTS----------ILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKV 387
DF +N+Y S +I N + I + D P ++ W+ +
Sbjct: 292 DFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPD-YVPRTDWDWI-I 349
Query: 388 VPDGFRALLNWIKKEY-NNPPVFITENGFS-----DDGRLDDEGRIDY 429
P+G + +K +Y N ++ITENG D + D+GRIDY
Sbjct: 350 YPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNTVYDDGRIDY 397
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 93/218 (42%), Gaps = 49/218 (22%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKG WD+ + N + A D YHKY D+ + ++ G R S++WSRI P
Sbjct: 28 GKGPVAWDKYLEDNYWYTAEP-----ASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFP 82
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPMVKLW-------------ITIKETLEAMQGY 793
TG ++NEKGV++Y L E +++P V L +E +E Y
Sbjct: 83 TG-YGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSNGDFLNRENIEHFIDY 141
Query: 794 ------DFKTYAPYLSMTGVG----GEYLAA-----------------HNLLRSHAKAYR 826
+F + + +G G+YL HN++ SHA+A +
Sbjct: 142 AAFCFEEFPEVNYWTTFNEIGPIGDGQYLVGKFPPGIKYDLAKVFQSHHNMMVSHARAVK 201
Query: 827 LYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAE 864
LY+ K KG++ + YP DP + D AAE
Sbjct: 202 LYKDK---GYKGEIGVVHALPTKYPYDPENPADVRAAE 236
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 430 YAFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQ 489
Y R S++WSRI PTG ++NEKGV++Y L E +++P VTL+H+D P+ L
Sbjct: 66 YGVNGIRISIAWSRIFPTG-YGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALH 124
Query: 490 DFGGWTNAIIADYFETYADFAYKTFGDKKYLTAMQK 525
G + N ++F YA F ++ F + Y T +
Sbjct: 125 SNGDFLNRENIEHFIDYAAFCFEEFPEVNYWTTFNE 160
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSFDY 569
K++L + A+ D N+ GY WS++D F W +GY R+G+ +VDF + Y
Sbjct: 399 KQHLEVLSDAIA-DGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFDTQERY 450
Score = 37.0 bits (84), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 946 DKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGY 984
D ++L LS AI D NV GY WSL+D F W GY
Sbjct: 396 DYVKQHLEVLSDAIA-DGANVKGYFIWSLMDVFSWSNGY 433
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 185/409 (45%), Gaps = 33/409 (8%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
P F++G +TAA+Q EGA + DGKG WD + A+ A D YHKY D
Sbjct: 5 LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNY-----WYTAEPASDFYHKYPVD 59
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYD 157
+ L + G R S++WSRI PTG +NEKGV++Y L E ++++P VTL+H+D
Sbjct: 60 LELAEEYGVNGIRISIAWSRIFPTG-YGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFD 118
Query: 158 LPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGAPYL 217
P+ L G + N ++F +A F+ F +V YW T NE + G P
Sbjct: 119 TPEALHSNGDFLNRENIEHFIDYAAFCFEEF-PEVNYWTTFNEIGPIGDGQYLVGKFPPG 177
Query: 218 NLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEA 277
L + HN++ +HA+A +LY+ K KG++ + YP++ + D A
Sbjct: 178 IKYDLAKVFQSHHNMMVSHARAVKLYKDK---GYKGEIGVVHALPTKYPYDPENPADVRA 234
Query: 278 A--ERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 335
A E + L A + V I+ +N G R F + + A K
Sbjct: 235 AELEDIIHNKFILDATYLGHYCDKTMEGVNHILAENG---GELDLRDEDF--QALDAAKD 289
Query: 336 SFDFFALNHYTSILIAN--------NNHTSNAPPSTINDRAATFSQDPNW-PSSNSPWLK 386
DF +N+Y S + +N S + P++ P ++ W+
Sbjct: 290 LNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDWDWI- 348
Query: 387 VVPDGFRALLNWIKKEY-NNPPVFITENGFS-----DDGRLDDEGRIDY 429
+ P+G + +K +Y N ++ITENG D + D+GRIDY
Sbjct: 349 IYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNTVYDDGRIDY 397
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 93/218 (42%), Gaps = 49/218 (22%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKG WD+ + N + A D YHKY D+ + ++ G R S++WSRI P
Sbjct: 28 GKGPVAWDKYLEDNYWYTAEP-----ASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFP 82
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPMVKLW-------------ITIKETLEAMQGY 793
TG ++NEKGV++Y L E +++P V L +E +E Y
Sbjct: 83 TG-YGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSNGDFLNRENIEHFIDY 141
Query: 794 ------DFKTYAPYLSMTGVG----GEYLAA-----------------HNLLRSHAKAYR 826
+F + + +G G+YL HN++ SHA+A +
Sbjct: 142 AAFCFEEFPEVNYWTTFNEIGPIGDGQYLVGKFPPGIKYDLAKVFQSHHNMMVSHARAVK 201
Query: 827 LYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAE 864
LY+ K KG++ + YP DP + D AAE
Sbjct: 202 LYKDK---GYKGEIGVVHALPTKYPYDPENPADVRAAE 236
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 430 YAFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQ 489
Y R S++WSRI PTG ++NEKGV++Y L E +++P VTL+H+D P+ L
Sbjct: 66 YGVNGIRISIAWSRIFPTG-YGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALH 124
Query: 490 DFGGWTNAIIADYFETYADFAYKTFGDKKYLTAMQK 525
G + N ++F YA F ++ F + Y T +
Sbjct: 125 SNGDFLNRENIEHFIDYAAFCFEEFPEVNYWTTFNE 160
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSFDY 569
K++L + A+ D N+ GY WS++D F W +GY R+G+ +VDF + Y
Sbjct: 399 KQHLEVLSDAIA-DGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFDTQERY 450
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 946 DKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGY 984
D ++L LS AI D NV GY WSL+D F W GY
Sbjct: 396 DYVKQHLEVLSDAIA-DGANVKGYFIWSLMDVFSWSNGY 433
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 182/407 (44%), Gaps = 29/407 (7%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
P F++G +TAA+Q EGA + DGKG WD + A+ A D YHKY D
Sbjct: 5 LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNY-----WYTAEPASDFYHKYPVD 59
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYD 157
+ L + G R S++WSRI PTG +NEKGV++Y L E ++++P VTL+H+D
Sbjct: 60 LELAEEYGVNGIRISIAWSRIFPTG-YGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFD 118
Query: 158 LPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGAPYL 217
P+ L G + N ++F +A F+ F +V YW T NE + G P
Sbjct: 119 TPEALHSNGDFLNRENIEHFIDYAAFCFEEF-PEVNYWTTFNEIGPIGDGQYLVGKFPPG 177
Query: 218 NLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEA 277
L + HN++ +HA+A +LY+ K KG++ + YP++ + D A
Sbjct: 178 IKYDLAKVFQSHHNMMVSHARAVKLYKDK---GYKGEIGVVHALPTKYPYDPENPADVRA 234
Query: 278 AERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSF 337
AE Y G Y + V+ A+ G L + + A K
Sbjct: 235 AELEDIIHNKFILDATY--LGHYSDKTMEGVNHILAENG-GELDLRDEDFQALDAAKDLN 291
Query: 338 DFFALNHYTSILIAN--------NNHTSNAPPSTINDRAATFSQDPNW-PSSNSPWLKVV 388
DF +N+Y S + +N S + P++ P ++ W+ +
Sbjct: 292 DFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDWDWI-IY 350
Query: 389 PDGFRALLNWIKKEY-NNPPVFITENGFS-----DDGRLDDEGRIDY 429
P+G + +K +Y N ++IT NG D + D+GRIDY
Sbjct: 351 PEGLYDQIMRVKNDYPNYKKIYITCNGLGYKDEFVDNTVYDDGRIDY 397
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 93/218 (42%), Gaps = 49/218 (22%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKG WD+ + N + A D YHKY D+ + ++ G R S++WSRI P
Sbjct: 28 GKGPVAWDKYLEDNYWYTAEP-----ASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFP 82
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPMVKLW-------------ITIKETLEAMQGY 793
TG ++NEKGV++Y L E +++P V L +E +E Y
Sbjct: 83 TG-YGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSNGDFLNRENIEHFIDY 141
Query: 794 ------DFKTYAPYLSMTGVG----GEYLAA-----------------HNLLRSHAKAYR 826
+F + + +G G+YL HN++ SHA+A +
Sbjct: 142 AAFCFEEFPEVNYWTTFNEIGPIGDGQYLVGKFPPGIKYDLAKVFQSHHNMMVSHARAVK 201
Query: 827 LYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAE 864
LY+ K KG++ + YP DP + D AAE
Sbjct: 202 LYKDK---GYKGEIGVVHALPTKYPYDPENPADVRAAE 236
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 430 YAFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQ 489
Y R S++WSRI PTG ++NEKGV++Y L E +++P VTL+H+D P+ L
Sbjct: 66 YGVNGIRISIAWSRIFPTG-YGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALH 124
Query: 490 DFGGWTNAIIADYFETYADFAYKTFGDKKYLTAMQK 525
G + N ++F YA F ++ F + Y T +
Sbjct: 125 SNGDFLNRENIEHFIDYAAFCFEEFPEVNYWTTFNE 160
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSFDY 569
K++L + A+ D N+ GY WS++D F W +GY R+G+ +VDF + Y
Sbjct: 399 KQHLEVLSDAIA-DGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFDTQERY 450
Score = 36.6 bits (83), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 946 DKCNKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGY 984
D ++L LS AI D NV GY WSL+D F W GY
Sbjct: 396 DYVKQHLEVLSDAIA-DGANVKGYFIWSLMDVFSWSNGY 433
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 177/394 (44%), Gaps = 60/394 (15%)
Query: 37 QFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKE 96
+FP FL+G +T++ Q+EG N W+ + + + K + AC+ + Y++
Sbjct: 4 KFPEMFLFGTATSSHQIEG--------NNRWNDWWYYE-QIGKLPYRSGKACNHWELYRD 54
Query: 97 DVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHY 156
D+ L+ +G+ YRFS+ WSR+ P + ++ NE YR +I+ +L++ I P+VTL+H+
Sbjct: 55 DIQLMTSLGYNAYRFSIEWSRLFP--EENKFNEDAFMKYREIIDLLLTRGITPLVTLHHF 112
Query: 157 DLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLD-VMGGYGYKSGAP 215
P + GG+ ++E + + + +KV T NEP+ VM GY P
Sbjct: 113 TSPLWFMKKGGFLREENLKHWEKYIEKVAELL-EKVKLVATFNEPMVYVMMGYLTAYWPP 171
Query: 216 YLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQ 275
++ + VA NLL+AHA AY L K+K + I L + + + D+
Sbjct: 172 FIRSPFKA--FKVAANLLKAHAIAYELLHGKFKVGIVKNIPIILPASD-------KERDR 222
Query: 276 EAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 335
+AAE+ F I+S G Y + + R+P +
Sbjct: 223 KAAEKADNLFNWHFLDAIWS--GKYRGVFKTY-------------RIP----------QS 257
Query: 336 SFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRAL 395
DF +N+YT+ + HT N + A S+ + W V P G
Sbjct: 258 DADFIGVNYYTA---SEVRHTWNPLKFFFEVKLADISER----KTQMGW-SVYPKGIYMA 309
Query: 396 LNWIKKEYNNPPVFITENGFSDDGRLDDEGRIDY 429
L K P++ITENG + LDDE R+++
Sbjct: 310 LK--KASRYGRPLYITENGIAT---LDDEWRVEF 338
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 149/370 (40%), Gaps = 89/370 (24%)
Query: 688 KGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILPT 747
+G N W+ + + ++G AC+ + Y++D+ ++ LG+ YRFS+ WSR+ P
Sbjct: 21 EGNNRWNDWWYYEQIGKLPYRSGK-ACNHWELYRDDIQLMTSLGYNAYRFSIEWSRLFP- 78
Query: 748 GDIDKINEKGVQYYRNLIDELLLNNIQPMVK-------LWIT------------------ 782
+ +K NE YR +ID LL I P+V LW
Sbjct: 79 -EENKFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSPLWFMKKGGFLREENLKHWEKYI 137
Query: 783 --IKETLE--------------AMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHAKAYR 826
+ E LE M GY + P++ + A NLL++HA AY
Sbjct: 138 EKVAELLEKVKLVATFNEPMVYVMMGYLTAYWPPFIRSPFKA--FKVAANLLKAHAIAYE 195
Query: 827 LYEKKYKPSQKGKVALTLNTHFNYPLDPSSKE-DQEAAERYIQFKFGLFAHPIYSQAGDY 885
L K+ KV + N P S KE D++AAE+ F I+S G Y
Sbjct: 196 LLHGKF------KVGIVKNIPIILP--ASDKERDRKAAEKADNLFNWHFLDAIWS--GKY 245
Query: 886 PPIVRQI-----------VDQNSAKEGRARSRLPRFTEEEIKALKGKTEEEIN------- 927
+ + V+ +A E R +F E A + + ++
Sbjct: 246 RGVFKTYRIPQSDADFIGVNYYTASEVRHTWNPLKFFFEVKLADISERKTQMGWSVYPKG 305
Query: 928 ---ALK-----GKQKYLTALSKAIGEDKCN-----KYLTALSKAIGEDKCNVIGYTAWSL 974
ALK G+ Y+T A +D+ ++L + KAI ED +V GY WS
Sbjct: 306 IYMALKKASRYGRPLYITENGIATLDDEWRVEFIIQHLQYVHKAI-EDGLDVRGYFYWSF 364
Query: 975 LDNFEWLCGY 984
+DN+EW G+
Sbjct: 365 MDNYEWKEGF 374
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 422 DDEGRIDYYAFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYH 481
DD + + YRFS+ WSR+ P + +K NE YR +ID LL I P+VTL+H
Sbjct: 54 DDIQLMTSLGYNAYRFSIEWSRLFP--EENKFNEDAFMKYREIIDLLLTRGITPLVTLHH 111
Query: 482 WDLPQPLQDFGGWTNAIIADYFETYADFAYKTFGDKKYLTAMQKALV 528
+ P GG+ ++E Y + + K + + +V
Sbjct: 112 FTSPLWFMKKGGFLREENLKHWEKYIEKVAELLEKVKLVATFNEPMV 158
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 518 KYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
++L + KA + D ++ GY WS +DN+EW +G+ RFG+V VD+ +
Sbjct: 341 QHLQYVHKA-IEDGLDVRGYFYWSFMDNYEWKEGFGPRFGLVEVDYQT 387
>pdb|4HA3|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Tris
pdb|4HA4|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Glycerol
Length = 489
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 166/446 (37%), Gaps = 88/446 (19%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDS---YHKY 94
FP FL+G S A FQ E + W VH + ++ + D + + Y
Sbjct: 4 FPKDFLFGWSQAGFQSEMGTPGSEDPNSDWYAWVHDRENIAAGLVSGDFPENGPGYWGNY 63
Query: 95 KEDVALIRDIGFQVYRFSLSWSRILPTGDTD---------------------------RI 127
++ + +G R + WSRI P D
Sbjct: 64 RKFHDAAQAMGLTAARIGVEWSRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALEQLDKMA 123
Query: 128 NEKGVQYYRNLINEVLSKNIQPMVTLNHYDLPQPLQE-----------FGGWANPVVADY 176
N + +YR + +++ S+ I ++ L H+ LP L + GW +
Sbjct: 124 NRDAINHYREMFSDLRSRGITFILNLYHWPLPLWLHDPIAIRRGNLSAPSGWLDVRTVIE 183
Query: 177 FESFADVAFKTFGDKVPYWITINEPLDVMGGYGY---KSGAP--YLNLSGLGGDYLVAHN 231
F F+ D V + T+NEP +V+ G GY KSG P YL L G N
Sbjct: 184 FAKFSAYVAWKLDDLVYMYSTMNEP-NVVWGLGYAAVKSGFPPGYLCLECAG---RAMKN 239
Query: 232 LLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERV-FQFTLGLFA 290
L++AHA+AY K++ K V + + ++ P + D+EAAER F F
Sbjct: 240 LVQAHARAY----DAVKAITKKPVGVIYANSDFTP---LTDADREAAERAKFDNRWAFF- 291
Query: 291 HPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILI 350
+ R +L T ++ LKG D+ +N+YT ++
Sbjct: 292 ------------------------DAVVRGQLGGSTRDD---LKGRLDWIGVNYYTRQVV 324
Query: 351 ANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFI 410
P + P S+ W + P+G +L Y + P+ +
Sbjct: 325 RARGSGYEIVPGYGHGCEPNGVSPAGRPCSDFGW-EFYPEGLYNVLKEYWDRY-HLPLLV 382
Query: 411 TENGFSDDGRLDDEGRIDYYAFQVYR 436
TENG +D+G + + +QV+R
Sbjct: 383 TENGIADEGDYQRPYYLVSHVYQVHR 408
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 528 VNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ D N+IGY WS+ DN+EW G++ RFG++ VD+S+
Sbjct: 410 LQDGVNVIGYLHWSLADNYEWASGFSKRFGLLMVDYST 447
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 961 EDKCNVIGYTAWSLLDNFEWLCGYT 985
+D NVIGY WSL DN+EW G++
Sbjct: 411 QDGVNVIGYLHWSLADNYEWASGFS 435
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 27/82 (32%)
Query: 436 RFSLSWSRILP------------TGD--------------IDKI-NEKGVQYYRNLIDEL 468
R + WSRI P GD +DK+ N + +YR + +L
Sbjct: 79 RIGVEWSRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALEQLDKMANRDAINHYREMFSDL 138
Query: 469 LLNNIQPMVTLYHWDLPQPLQD 490
I ++ LYHW LP L D
Sbjct: 139 RSRGITFILNLYHWPLPLWLHD 160
>pdb|3APG|A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|B Chain B, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|C Chain C, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|D Chain D, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
Length = 473
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 159/428 (37%), Gaps = 99/428 (23%)
Query: 37 QFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDS---YHK 93
+FP F++G S + FQ E + E+ W VH + ++ + D+ + +H
Sbjct: 3 KFPKNFMFGYSWSGFQFEMGL-PGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHL 61
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGDTDR--------------------------- 126
YK+D + +G R + W+RI P D
Sbjct: 62 YKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEK 121
Query: 127 -INEKGVQYYRNLINEVLSKNIQPMVTLNHYDLP------------QPLQEFGGWANPVV 173
N + +++YR + ++ + ++ L H+ LP P + GW +
Sbjct: 122 IANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKT 181
Query: 174 ADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGY---KSGAPYLNLSGLGGDYLVAH 230
F FA D V W T+NEP +V+ GY +SG P LS +
Sbjct: 182 VVEFVKFAAFVAYHLDDLVDMWSTMNEP-NVVYNQGYINLRSGFPPGYLSFEAAE-KAKF 239
Query: 231 NLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERVFQFTLGLFA 290
NL++AH AY +A + +++ ++ F
Sbjct: 240 NLIQAHIGAY---------------------------DAIKEYSEKSVGVIYAFAW---- 268
Query: 291 HPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILI 350
+ P+ + D+ +E R + + I KG D+ +N+Y+ ++
Sbjct: 269 ---------HDPLAEEYKDE--VEEIRKKD----YEFVTILHSKGKLDWIGVNYYSRLVY 313
Query: 351 -ANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVF 409
A + H P F++ P+S+ W ++ P+G LL ++ Y P+
Sbjct: 314 GAKDGHLVPLPGYGFMSERGGFAKSGR-PASDFGW-EMYPEGLENLLKYLNNAY-ELPMI 370
Query: 410 ITENGFSD 417
ITENG +D
Sbjct: 371 ITENGMAD 378
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 519 YLTAMQKALVN---DKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSFDYF 570
YL + KA+ N + ++ GY WS+ DN+EW G+ RFG+V+VDF + Y
Sbjct: 387 YLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYL 441
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 684 VPSGKGENIWDRLVHTNPAAVVDKQNGDVACDS---YHKYKEDVAIIKDLGFQVYRFSLS 740
+P + E+ W VH +GD+ + +H YK+D I + LG R +
Sbjct: 23 LPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIE 82
Query: 741 WSRILPTGDID 751
W+RI P D
Sbjct: 83 WARIFPKPTFD 93
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 567 FDYFGLNHYTSFLVSKK---TEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRA 623
D+ G+N+Y+ + K P P F ++ R + F ++ P+G
Sbjct: 300 LDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRP---ASDFGWEMYPEGLEN 356
Query: 624 LLNWIKKEYNNPPVFITENGFSD 646
LL ++ Y P+ ITENG +D
Sbjct: 357 LLKYLNNAYE-LPMIITENGMAD 378
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 951 YLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGY 984
+L A+ A+ E +V GY WSL DN+EW G+
Sbjct: 391 HLKAVYNAMKEG-ADVRGYLHWSLTDNYEWAQGF 423
>pdb|1UWQ|A Chain A, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWQ|B Chain B, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWR|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWR|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWS|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWS|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWT|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWT|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWU|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|1UWU|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|2CEQ|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CEQ|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CER|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2CER|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
Length = 489
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 166/443 (37%), Gaps = 75/443 (16%)
Query: 36 HQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDS---YH 92
+ FP F +G S A FQ E W VH ++ + D+ + +
Sbjct: 2 YSFPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAGLVSGDLPENGPGYWG 61
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPT----------------------GDTDRI--- 127
YK + +G ++ R ++ WSRI P + R+
Sbjct: 62 NYKTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEY 121
Query: 128 -NEKGVQYYRNLINEVLSKNIQPMVTLNHYDLPQPLQE-----------FGGWANPVVAD 175
N+ + +YR + ++ S+ + ++ + H+ LP L + GW +
Sbjct: 122 ANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVY 181
Query: 176 YFESFADVAFKTFGDKVPYWITINEP--LDVMGGYGYKSGAPYLNLSGLGGDYLVAHNLL 233
F F+ F D V + T+NEP + +G G KSG P LS +N++
Sbjct: 182 EFARFSAYIAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS-FELSRRAMYNII 240
Query: 234 RAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPI 293
+AHA+AY KS+ K V I + ++ P + +D EA E F
Sbjct: 241 QAHARAY----DGIKSVSKKPVGIIYANSSFQP---LTDKDMEAVEMAENDNRWWF---- 289
Query: 294 YSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANN 353
+ I+R + + + K R LKG D+ +N+YT ++
Sbjct: 290 ------FDAIIRGEITRGNEKIVR-------------DDLKGRLDWIGVNYYTRTVVKRT 330
Query: 354 NHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITEN 413
+ + P+S+ W + P+G +L Y + +++TEN
Sbjct: 331 EKGYVSLGGYGHGCERNSVSLAGLPTSDFGW-EFFPEGLYDVLTKYWNRY-HLYMYVTEN 388
Query: 414 GFSDDGRLDDEGRIDYYAFQVYR 436
G +DD + + +QV+R
Sbjct: 389 GIADDADYQRPYYLVSHVYQVHR 411
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 528 VNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSFDYF 570
+N ++ GY WS+ DN+EW G++ RFG++ VD+++ Y+
Sbjct: 413 INSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDYNTKRLYW 455
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 964 CNVIGYTAWSLLDNFEWLCGYT 985
+V GY WSL DN+EW G++
Sbjct: 417 ADVRGYLHWSLADNYEWASGFS 438
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 26/86 (30%)
Query: 431 AFQVYRFSLSWSRILPT------------GDIDKI--------------NEKGVQYYRNL 464
++ R ++ WSRI P D+ ++ N+ + +YR +
Sbjct: 74 GLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREI 133
Query: 465 IDELLLNNIQPMVTLYHWDLPQPLQD 490
+L + ++ +YHW LP L D
Sbjct: 134 FKDLKSRGLYFILNMYHWPLPLWLHD 159
>pdb|4EAM|A Chain A, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAM|B Chain B, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAN|A Chain A, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
pdb|4EAN|B Chain B, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
Length = 489
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 169/447 (37%), Gaps = 83/447 (18%)
Query: 36 HQFPPGFLWGCSTAAFQVE----GAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDS- 90
+ FP F +G S A FQ E G+ + + G VH ++ + D+ +
Sbjct: 2 YSFPNSFRFGWSQAGFQSEMGTPGSEDPNTDGYK----WVHDPENMAAGLVSGDLPENGP 57
Query: 91 --YHKYKEDVALIRDIGFQVYRFSLSWSRILPT----------------------GDTDR 126
+ YK + +G ++ R ++ WSRI P + R
Sbjct: 58 GYWGNYKTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKR 117
Query: 127 I----NEKGVQYYRNLINEVLSKNIQPMVTLNHYDLPQPLQE-----------FGGWANP 171
+ N+ + +YR + ++ S+ + ++ + H+ LP L + GW +
Sbjct: 118 LDEYANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLST 177
Query: 172 VVADYFESFADVAFKTFGDKVPYWITINEP--LDVMGGYGYKSGAPYLNLSGLGGDYLVA 229
F F+ F D V + T+NEP + +G G KSG P LS
Sbjct: 178 RTVYEFARFSAYIAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS-FELSRRAM 236
Query: 230 HNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERVFQFTLGLF 289
+N+++AHA+AY KS+ K V I + ++ P E E AE ++
Sbjct: 237 YNIIQAHARAY----DGIKSVSKKPVGIIYANSSFQPLTDKDMEAVEMAENDNRWWF--- 289
Query: 290 AHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSIL 349
+ I+R + + + K R LKG D+ +N+YT +
Sbjct: 290 ----------FDAIIRGEITRGNEKIVR-------------DDLKGRLDWIGVNYYTRTV 326
Query: 350 IANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVF 409
+ + + P+S+ W + P+G +L Y + ++
Sbjct: 327 VKRTEKGYVSLGGYGHGCERNSVSLAGLPTSDFGW-EFFPEGLYDVLTKYWNRY-HLYMY 384
Query: 410 ITENGFSDDGRLDDEGRIDYYAFQVYR 436
+TENG +DD + + +QV+R
Sbjct: 385 VTENGIADDADYQRPYYLVSHVYQVHR 411
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 528 VNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+N ++ GY WS+ DN+EW G++ RFG++ VD+++
Sbjct: 413 INSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDYNT 450
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 964 CNVIGYTAWSLLDNFEWLCGYT 985
+V GY WSL DN+EW G++
Sbjct: 417 ADVRGYLHWSLADNYEWASGFS 438
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 26/86 (30%)
Query: 431 AFQVYRFSLSWSRILPT------------GDIDKI--------------NEKGVQYYRNL 464
++ R ++ WSRI P D+ ++ N+ + +YR +
Sbjct: 74 GLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREI 133
Query: 465 IDELLLNNIQPMVTLYHWDLPQPLQD 490
+L + ++ +YHW LP L D
Sbjct: 134 FKDLKSRGLYFILNMYHWPLPLWLHD 159
>pdb|1GOW|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus
pdb|1GOW|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus
Length = 489
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 163/443 (36%), Gaps = 75/443 (16%)
Query: 36 HQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDS---YH 92
+ FP F +G S A FQ E W VH ++ + D+ + +
Sbjct: 2 YSFPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAGLVSGDLPENGPGYWG 61
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPT----------------------GDTDRI--- 127
YK + +G ++ R + WSR P + R+
Sbjct: 62 NYKTFHDNAQKMGLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEVEINENELKRLDEY 121
Query: 128 -NEKGVQYYRNLINEVLSKNIQPMVTLNHYDLPQPLQE-----------FGGWANPVVAD 175
N+ + +YR + ++ S+ + + + H+ LP L + GW +
Sbjct: 122 ANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVY 181
Query: 176 YFESFADVAFKTFGDKVPYWITINEP--LDVMGGYGYKSGAPYLNLSGLGGDYLVAHNLL 233
F F+ F D V + T+NEP + +G G KSG P LS +N++
Sbjct: 182 EFARFSAYTAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS-FELSRRAMYNII 240
Query: 234 RAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPI 293
+AHA+AY KS+ K V I + ++ P + +D EA E F
Sbjct: 241 QAHARAY----DGIKSVSKKPVGIIYANSSFQP---LTDKDMEAVEMAENDNRWWF---- 289
Query: 294 YSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANN 353
+ I+R + + + K R LKG D+ +N+YT ++
Sbjct: 290 ------FDAIIRGEITRGNEKIVR-------------DDLKGRLDWIGVNYYTRTVVKRT 330
Query: 354 NHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITEN 413
+ + P+S+ W + P+G +L Y + +++TEN
Sbjct: 331 EKGYVSLGGYGHGCERNSVSLAGLPTSDFGW-EFFPEGLYDVLTKYWNRY-HLYMYVTEN 388
Query: 414 GFSDDGRLDDEGRIDYYAFQVYR 436
G +DD + + +QV+R
Sbjct: 389 GIADDADYQRPYYLVSHVYQVHR 411
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 528 VNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+N ++ GY WS+ DN+EW G++ RFG++ VD+++
Sbjct: 413 INSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDYNT 450
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 964 CNVIGYTAWSLLDNFEWLCGYT 985
+V GY WSL DN+EW G++
Sbjct: 417 ADVRGYLHWSLADNYEWASGFS 438
>pdb|1UWI|A Chain A, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|B Chain B, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|C Chain C, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|D Chain D, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
Length = 489
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 163/443 (36%), Gaps = 75/443 (16%)
Query: 36 HQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDS---YH 92
+ FP F +G S A FQ E W VH ++ + D+ + +
Sbjct: 2 YSFPNSFRFGWSQAGFQSEMGTPGSEDLNTDWYKWVHDPENMAAGLVSGDLPENGPGYWG 61
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPT----------------------GDTDRI--- 127
YK + +G ++ R + WSR P + R+
Sbjct: 62 NYKTFHNNAQKMGLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEVEINENELKRLDEY 121
Query: 128 -NEKGVQYYRNLINEVLSKNIQPMVTLNHYDLPQPLQE-----------FGGWANPVVAD 175
N+ + +YR + ++ S+ + + + H+ LP L + GW +
Sbjct: 122 ANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVY 181
Query: 176 YFESFADVAFKTFGDKVPYWITINEP--LDVMGGYGYKSGAPYLNLSGLGGDYLVAHNLL 233
F F+ F D V + T+NEP + +G G KSG P LS +N++
Sbjct: 182 EFARFSAYTAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS-FELSRRAMYNII 240
Query: 234 RAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPI 293
+AHA+AY KS+ K V I + ++ P + +D EA E F
Sbjct: 241 QAHARAY----DGIKSVSKKPVGIIYANSSFQP---LTDKDMEAVEMAENDNRWWF---- 289
Query: 294 YSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANN 353
+ I+R + + + K R LKG D+ +N+YT ++
Sbjct: 290 ------FDAIIRGEITRGNEKIVR-------------DDLKGRLDWIGVNYYTRTVVKRT 330
Query: 354 NHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITEN 413
+ + P+S+ W + P+G +L Y + +++TEN
Sbjct: 331 GKGYVSLGGYGHGCERNSVSLAGLPTSDFGW-EFFPEGLYDVLTKYWNRY-HLYMYVTEN 388
Query: 414 GFSDDGRLDDEGRIDYYAFQVYR 436
G +DD + + +QV+R
Sbjct: 389 GIADDADYQRPYYLVSHVYQVHR 411
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 528 VNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+N ++ GY WS+ DN+EW G++ RFG++ VD+++
Sbjct: 413 INSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDYNT 450
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 964 CNVIGYTAWSLLDNFEWLCGYT 985
+V GY WSL DN+EW G++
Sbjct: 417 ADVRGYLHWSLADNYEWASGFS 438
>pdb|1QVB|A Chain A, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
pdb|1QVB|B Chain B, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
Length = 481
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 91/250 (36%), Gaps = 48/250 (19%)
Query: 37 QFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDS---YHK 93
+FP F+ G S++ FQ E + W VH + + D + ++
Sbjct: 2 KFPKDFMIGYSSSPFQFEAGIPGSEDPNSDWWVWVHDPENTAAGLVSGDFPENGPGYWNL 61
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTG-------------------DTD--------- 125
+ D L +G R + WSRI P D D
Sbjct: 62 NQNDHDLAEKLGVNTIRVGVEWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDE 121
Query: 126 RINEKGVQYYRNLINEVLSKNIQPMVTLNHYDLP------------QPLQEFGGWANPVV 173
N++ V +Y + + + + + ++ L H+ LP P + GW N
Sbjct: 122 LANKEAVNHYVEMYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEES 181
Query: 174 ADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGY---KSGAPYLNLSGLGGDYLVAH 230
F +A G+ W T+NEP +V+ GY K G P LS D
Sbjct: 182 VVEFAKYAAYIAWKMGELPVMWSTMNEP-NVVYEQGYMFVKGGFPPGYLSLEAADK-ARR 239
Query: 231 NLLRAHAKAY 240
N+++AHA+AY
Sbjct: 240 NMIQAHARAY 249
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 529 NDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSFDYF 570
N+ + GY WS+ DN+EW G+ +FG+V VDF + Y
Sbjct: 413 NEGIPVKGYLHWSLTDNYEWAQGFRQKFGLVMVDFKTKKRYL 454
>pdb|3EMC|A Chain A, Crystal Structure Of Xynb, An Intracellular Xylanase From
Paenibacillus Barcinonensis
pdb|3EMQ|A Chain A, Crystal Structure Of Xilanase Xynb From Paenibacillus
Barcelonensis Complexed With An Inhibitor
pdb|3EMZ|A Chain A, Crystal Structure Of Xylanase Xynb From Paenibacillus
Barcinonensis Complexed With A Conduramine Derivative
Length = 331
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 531 KCNIIGYTAWSILDNFEWLDGYTCR 555
+ NI T W + DN+ WLD + R
Sbjct: 281 RSNITSVTFWGVADNYTWLDNFPVR 305
>pdb|3NDY|A Chain A, The Structure Of The Catalytic And Carbohydrate Binding
Domain Of Endoglucanase D From Clostridium Cellulovorans
pdb|3NDY|B Chain B, The Structure Of The Catalytic And Carbohydrate Binding
Domain Of Endoglucanase D From Clostridium Cellulovorans
pdb|3NDY|C Chain C, The Structure Of The Catalytic And Carbohydrate Binding
Domain Of Endoglucanase D From Clostridium Cellulovorans
pdb|3NDY|D Chain D, The Structure Of The Catalytic And Carbohydrate Binding
Domain Of Endoglucanase D From Clostridium Cellulovorans
pdb|3NDZ|A Chain A, The Structure Of The Catalytic And Carbohydrate Binding
Domain Of Endoglucanase D From Clostridium Cellulovorans
Bound To Cellotriose
pdb|3NDZ|B Chain B, The Structure Of The Catalytic And Carbohydrate Binding
Domain Of Endoglucanase D From Clostridium Cellulovorans
Bound To Cellotriose
pdb|3NDZ|C Chain C, The Structure Of The Catalytic And Carbohydrate Binding
Domain Of Endoglucanase D From Clostridium Cellulovorans
Bound To Cellotriose
pdb|3NDZ|D Chain D, The Structure Of The Catalytic And Carbohydrate Binding
Domain Of Endoglucanase D From Clostridium Cellulovorans
Bound To Cellotriose
Length = 345
Score = 30.0 bits (66), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 101 IRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYDLPQ 160
I++ GF R ++W + I++ ++ + N ++ ++ L+H + +
Sbjct: 51 IKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHEN--E 108
Query: 161 PLQEFGGWANPVVADYFESFADVA--FKTFGDKVPYWITINEPLDVMGGYGYKSGAPYLN 218
L+ F V A + + +A FK +GD + + T+NEP V + +G Y N
Sbjct: 109 WLKPFYANEAQVKAQLTKVWTQIANNFKKYGDHLIF-ETMNEPRPVGASLQW-TGGSYEN 166
Query: 219 LSGLGGDYLVAHNLLRA 235
+ L A N +RA
Sbjct: 167 REVVNRYNLTAVNAIRA 183
>pdb|3RJY|A Chain A, Crystal Structure Of Hyperthermophilic
Endo-Beta-1,4-Glucanase In Complex With Substrate
Length = 320
Score = 30.0 bits (66), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 90 SYHKYKED--VALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNI 147
S+ Y ED +I++ GF R + WS + I++ + +++++ L ++
Sbjct: 37 SWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDL 96
Query: 148 QPMVTLNHY-DLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEP 201
++ +H+ +L Q ++G PV+ + ++ A AFK + DK+ + I NEP
Sbjct: 97 VVIINCHHFEELYQAPDKYG----PVLVEIWKQVAQ-AFKDYPDKLFFEI-FNEP 145
>pdb|3RJX|A Chain A, Crystal Structure Of Hyperthermophilic
Endo-Beta-1,4-Glucanase
Length = 320
Score = 30.0 bits (66), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 90 SYHKYKED--VALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNI 147
S+ Y ED +I++ GF R + WS + I++ + +++++ L ++
Sbjct: 37 SWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDL 96
Query: 148 QPMVTLNHY-DLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEP 201
++ +H+ +L Q ++G PV+ + ++ A AFK + DK+ + I NEP
Sbjct: 97 VVIINCHHFEELYQAPDKYG----PVLVEIWKQVAQ-AFKDYPDKLFFEI-FNEP 145
>pdb|3NCO|A Chain A, Crystal Structure Of Fncel5a From F. Nodosum Rt17-B1
pdb|3NCO|B Chain B, Crystal Structure Of Fncel5a From F. Nodosum Rt17-B1
Length = 320
Score = 30.0 bits (66), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 90 SYHKYKED--VALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNI 147
S+ Y ED +I++ GF R + WS + I++ + +++++ L ++
Sbjct: 37 SWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDL 96
Query: 148 QPMVTLNHY-DLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEP 201
++ +H+ +L Q ++G PV+ + ++ A AFK + DK+ + I NEP
Sbjct: 97 VVIINCHHFEELYQAPDKYG----PVLVEIWKQVAQ-AFKDYPDKLFFEI-FNEP 145
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,549,363
Number of Sequences: 62578
Number of extensions: 1592823
Number of successful extensions: 5086
Number of sequences better than 100.0: 83
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3993
Number of HSP's gapped (non-prelim): 535
length of query: 985
length of database: 14,973,337
effective HSP length: 108
effective length of query: 877
effective length of database: 8,214,913
effective search space: 7204478701
effective search space used: 7204478701
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)