RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy14902
(985 letters)
>3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET:
BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A*
3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A*
3vij_A* 3vik_A* 3vil_A*
Length = 487
Score = 609 bits (1573), Expect = 0.0
Identities = 203/401 (50%), Positives = 270/401 (67%), Gaps = 5/401 (1%)
Query: 31 TQMNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDS 90
+ + FP F G +TA++Q+EGAW+E+GKG NIWD L H PD V D D+A DS
Sbjct: 5 SSDTVYTFPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDS 64
Query: 91 YHKYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPM 150
YH YKEDV +++++G QVYRFS+SW+R+LP G + +N+ G+ YY NLINE+L+ I+PM
Sbjct: 65 YHLYKEDVKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPM 124
Query: 151 VTLNHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVM-GGYG 209
VT+ H+DLPQ LQ+ GGW N V+A Y E++A V FK FGD+V W+T NEPL M G
Sbjct: 125 VTMYHWDLPQALQDLGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNEPLTFMDGYAS 184
Query: 210 YKSGAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNA 269
AP +N G+ GDYL AH ++ AHA+ Y LY++++++ Q GKV I+L+ P
Sbjct: 185 EIGMAPSINTPGI-GDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPAT- 242
Query: 270 TSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEE 329
S ED+ + E QF LGL+AHPI++E GDYP +++ V +NSA EG SRLP+FT EE
Sbjct: 243 NSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEE 302
Query: 330 IKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVP 389
++ ++G+ DF +N YT++L + PS D +QD WP S S WLKVVP
Sbjct: 303 VEYIRGTHDFLGINFYTALLGKSG--VEGYEPSRYRDSGVILTQDAAWPISASSWLKVVP 360
Query: 390 DGFRALLNWIKKEYNNPPVFITENGFSDDGRLDDEGRIDYY 430
GFR LNWIK EYNNPPVFITENGFSD G L+D GR+ YY
Sbjct: 361 WGFRKELNWIKNEYNNPPVFITENGFSDYGGLNDTGRVHYY 401
Score = 326 bits (838), Expect = e-101
Identities = 115/276 (41%), Positives = 161/276 (58%), Gaps = 44/276 (15%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKG NIWD L H +P VVD GD+A DSYH YKEDV I+K+LG QVYRFS+SW+R+LP
Sbjct: 35 GKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVLP 94
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
G + +N+ G+ YY NLI+ELL N I+PM
Sbjct: 95 EGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQALQDLGGWPNLVLAKYSENY 154
Query: 777 -----------VKLWITIKETL-EAMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHAKA 824
VKLW+T E L AP ++ G+ G+YLAAH ++ +HA+
Sbjct: 155 ARVLFKNFGDRVKLWLTFNEPLTFMDGYASEIGMAPSINTPGI-GDYLAAHTVIHAHARI 213
Query: 825 YRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGD 884
Y LY+++++ Q GKV ++LN ++ P S ED+ + E Y QF GL+AHPI+++ GD
Sbjct: 214 YHLYDQEFRAEQGGKVGISLNINWCEPATN-SAEDRASCENYQQFNLGLYAHPIFTEEGD 272
Query: 885 YPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 920
YP +++ V +NSA EG SRLP+FT EE++ ++G
Sbjct: 273 YPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRG 308
Score = 171 bits (437), Expect = 5e-46
Identities = 51/86 (59%), Positives = 65/86 (75%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDF 491
QVYRFS+SW+R+LP G + +N+ G+ YY NLI+ELL N I+PMVT+YHWDLPQ LQD
Sbjct: 80 AQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQALQDL 139
Query: 492 GGWTNAIIADYFETYADFAYKTFGDK 517
GGW N ++A Y E YA +K FGD+
Sbjct: 140 GGWPNLVLAKYSENYARVLFKNFGDR 165
Score = 141 bits (358), Expect = 8e-36
Identities = 55/96 (57%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRALL 625
+ D+ G+N YT+ L E EPS D+ V+L+ D WP AS WLKVVP GFR L
Sbjct: 309 THDFLGINFYTALLGKSGVEG-YEPSRYRDSGVILTQDAAWPISASSWLKVVPWGFRKEL 367
Query: 626 NWIKKEYNNPPVFITENGFSDDGQLDDQGRVDFYQG 661
NWIK EYNNPPVFITENGFSD G L+D GRV +Y
Sbjct: 368 NWIKNEYNNPPVFITENGFSDYGGLNDTGRVHYYTE 403
Score = 92.2 bits (230), Expect = 1e-19
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
++L M KA+ D N+IGYTAWS++DNFEWL GY+ +FGI VDF
Sbjct: 402 TEHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFED 450
Score = 73.7 bits (182), Expect = 1e-13
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++L + KAI ED NVIGYTAWSL+DNFEWL GY+
Sbjct: 402 TEHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYS 438
>1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect,
beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne
brassicae} SCOP: c.1.8.4
Length = 464
Score = 605 bits (1563), Expect = 0.0
Identities = 207/399 (51%), Positives = 278/399 (69%), Gaps = 8/399 (2%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
M+ ++FP F++G STA++Q+EG WNEDGKGENIWD LVHT P+++KD N D+ACDSYH
Sbjct: 1 MD-YKFPKDFMFGTSTASYQIEGGWNEDGKGENIWDRLVHTSPEVIKDGTNGDIACDSYH 59
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
KYKEDVA+I+D+ + YRFS+SW+RI P+G + + KG+ YY NLINE++ +I P+VT
Sbjct: 60 KYKEDVAIIKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVT 119
Query: 153 LNHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKS 212
+ H+DLPQ LQ+ GGW NP+++DYF+ +A V F FGD+V +WIT NEP+ V GY K+
Sbjct: 120 MYHWDLPQYLQDLGGWVNPIMSDYFKEYARVLFTYFGDRVKWWITFNEPIAVCKGYSIKA 179
Query: 213 GAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSK 272
AP LNL G YL H L AH KAYRLYE+ +K Q GK+SI++ + P NA S
Sbjct: 180 YAPNLNLKTT-GHYLAGHTQLIAHGKAYRLYEEMFKPTQNGKISISISGVFFMPKNAESD 238
Query: 273 EDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKA 332
+D E AER QF G F HP+Y GDYPPI+++ VDQ S +EG S+LP+FT++EIK
Sbjct: 239 DDIETAERANQFERGWFGHPVYK--GDYPPIMKKWVDQKSKEEGLPWSKLPKFTKDEIKL 296
Query: 333 LKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNW-PSSNSPWLKVVPDG 391
LKG+ DF+ALNHY+S L+ S+ P+ D + S D W + +P++ VP+G
Sbjct: 297 LKGTADFYALNHYSSRLVTFG---SDPNPNFNPDASYVTSVDEAWLKPNETPYIIPVPEG 353
Query: 392 FRALLNWIKKEYNNPPVFITENGFSDDGRLDDEGRIDYY 430
R LL W+K EY NP + ITENG+ DDG+LDD +I Y
Sbjct: 354 LRKLLIWLKNEYGNPQLLITENGYGDDGQLDDFEKISYL 392
Score = 329 bits (846), Expect = e-103
Identities = 128/276 (46%), Positives = 169/276 (61%), Gaps = 44/276 (15%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKGENIWDRLVHT+P + D NGD+ACDSYHKYKEDVAIIKDL + YRFS+SW+RI P
Sbjct: 28 GKGENIWDRLVHTSPEVIKDGTNGDIACDSYHKYKEDVAIIKDLNLKFYRFSISWARIAP 87
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
+G ++ + KG+ YY NLI+EL+ N+I P+
Sbjct: 88 SGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWDLPQYLQDLGGWVNPIMSDYFKEY 147
Query: 777 -----------VKLWITIKETLEAMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHAKAY 825
VK WIT E + +GY K YAP L++ G YLA H L +H KAY
Sbjct: 148 ARVLFTYFGDRVKWWITFNEPIAVCKGYSIKAYAPNLNLKTT-GHYLAGHTQLIAHGKAY 206
Query: 826 RLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGDY 885
RLYE+ +KP+Q GK++++++ F P + S +D E AER QF+ G F HP+Y GDY
Sbjct: 207 RLYEEMFKPTQNGKISISISGVFFMPKNAESDDDIETAERANQFERGWFGHPVYK--GDY 264
Query: 886 PPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
PPI+++ VDQ S +EG S+LP+FT++EIK LKG
Sbjct: 265 PPIMKKWVDQKSKEEGLPWSKLPKFTKDEIKLLKGT 300
Score = 171 bits (437), Expect = 4e-46
Identities = 47/86 (54%), Positives = 65/86 (75%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDF 491
+ YRFS+SW+RI P+G ++ + KG+ YY NLI+EL+ N+I P+VT+YHWDLPQ LQD
Sbjct: 73 LKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWDLPQYLQDL 132
Query: 492 GGWTNAIIADYFETYADFAYKTFGDK 517
GGW N I++DYF+ YA + FGD+
Sbjct: 133 GGWVNPIMSDYFKEYARVLFTYFGDR 158
Score = 138 bits (350), Expect = 7e-35
Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPK-GASFWLKVVPDGFRAL 624
+ D++ LNHY+S LV+ P P+F DA+ V S D W K + ++ VP+G R L
Sbjct: 300 TADFYALNHYSSRLVTFG--SDPNPNFNPDASYVTSVDEAWLKPNETPYIIPVPEGLRKL 357
Query: 625 LNWIKKEYNNPPVFITENGFSDDGQLDDQGRVDFYQG 661
L W+K EY NP + ITENG+ DDGQLDD ++ + +
Sbjct: 358 LIWLKNEYGNPQLLITENGYGDDGQLDDFEKISYLKN 394
Score = 91.8 bits (229), Expect = 1e-19
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
K YL A +A+ DKCN+IGYT WS+LDNFEW GY+ FG+V +DF+
Sbjct: 393 KNYLNATLQAMYEDKCNVIGYTVWSLLDNFEWFYGYSIHFGLVKIDFND 441
Score = 73.3 bits (181), Expect = 1e-13
Identities = 25/37 (67%), Positives = 28/37 (75%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
YL A +A+ EDKCNVIGYT WSLLDNFEW GY+
Sbjct: 393 KNYLNATLQAMYEDKCNVIGYTVWSLLDNFEWFYGYS 429
>2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral
beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA;
1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X*
Length = 469
Score = 594 bits (1534), Expect = 0.0
Identities = 174/396 (43%), Positives = 237/396 (59%), Gaps = 8/396 (2%)
Query: 38 FPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKED 97
FP GF W +TAA+QVEG W+ DGKG +WD H + V Q DVAC SY ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 98 VALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYD 157
+ I+ +G YRFSLSWSR+LP G T IN+KG+ YY +I+++L + P+VTL H+D
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 158 LPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYGYKSGAPY 216
LPQ L++ GGW + + + F+ +A F TFGD+V WITINE + + Y P
Sbjct: 123 LPQTLEDQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPG 182
Query: 217 LNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQE 276
+ G GG Y AHNL++AHA+++ Y+ ++ QKG VS++L + P + S DQE
Sbjct: 183 IPHFGTGG-YQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQE 241
Query: 277 AAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGS 336
AA+R F L LFA PI+ + GDYP +V+ + S K+G SRLP FTEEE K +KG+
Sbjct: 242 AAKRAITFHLDLFAKPIFID-GDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGT 300
Query: 337 FDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRALL 396
DFFA+ +YT+ LI + D F DP+W N W+ VVP G LL
Sbjct: 301 ADFFAVQYYTTRLIKYQE-NKKGELGILQDAEIEFFPDPSWK--NVDWIYVVPWGVCKLL 357
Query: 397 NWIKKEYNNPPVFITENGFS--DDGRLDDEGRIDYY 430
+IK YNNP ++ITENGF D LDD R +Y+
Sbjct: 358 KYIKDTYNNPVIYITENGFPQSDPAPLDDTQRWEYF 393
Score = 324 bits (834), Expect = e-101
Identities = 110/276 (39%), Positives = 145/276 (52%), Gaps = 44/276 (15%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKG +WD H V Q GDVAC SY ++ED+ IK LG YRFSLSWSR+LP
Sbjct: 26 GKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLP 85
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
G IN+KG+ YY +ID+LL N + P+
Sbjct: 86 DGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQGGWLSEAIIESFDKY 145
Query: 777 -----------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHAKA 824
VK WITI E ++ YD + P + G GG Y AAHNL+++HA++
Sbjct: 146 AQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPGIPHFGTGG-YQAAHNLIKAHARS 204
Query: 825 YRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGD 884
+ Y+ ++ QKG V+L+L + P DP+S DQEAA+R I F LFA PI+ GD
Sbjct: 205 WHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFID-GD 263
Query: 885 YPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 920
YP +V+ + S K+G SRLP FTEEE K +KG
Sbjct: 264 YPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKG 299
Score = 171 bits (437), Expect = 4e-46
Identities = 47/86 (54%), Positives = 61/86 (70%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDF 491
YRFSLSWSR+LP G IN+KG+ YY +ID+LL N + P+VTLYH+DLPQ L+D
Sbjct: 71 LTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQ 130
Query: 492 GGWTNAIIADYFETYADFAYKTFGDK 517
GGW + I + F+ YA F + TFGD+
Sbjct: 131 GGWLSEAIIESFDKYAQFCFSTFGDR 156
Score = 133 bits (337), Expect = 3e-33
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRALL 625
+ D+F + +YT+ L+ + E DA + D W W+ VVP G LL
Sbjct: 300 TADFFAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSWK--NVDWIYVVPWGVCKLL 357
Query: 626 NWIKKEYNNPPVFITENGFS--DDGQLDDQGRVDFYQG 661
+IK YNNP ++ITENGF D LDD R ++++
Sbjct: 358 KYIKDTYNNPVIYITENGFPQSDPAPLDDTQRWEYFRQ 395
Score = 92.2 bits (230), Expect = 1e-19
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
++ + KA+ DK N+ Y AWS+LDNFEW GY+ RFG+ HVDF
Sbjct: 394 RQTFQELFKAIQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFED 442
Score = 72.2 bits (178), Expect = 3e-13
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
+ L KAI DK N+ Y AWSLLDNFEW GY+
Sbjct: 394 RQTFQELFKAIQLDKVNLQVYCAWSLLDNFEWNQGYS 430
>2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A
{Rauvolfia serpentina} PDB: 2jf6_A
Length = 532
Score = 571 bits (1475), Expect = 0.0
Identities = 148/447 (33%), Positives = 235/447 (52%), Gaps = 34/447 (7%)
Query: 5 LFLALLPLLWSTVELKRSQDKGGNLGTQ-MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKG 63
L +A++P ++ E S +++ FP F++G +A+Q EGA+NE +G
Sbjct: 9 LVVAIVPKPNASTEHTNSHLIPVTRSKIVVHRRDFPQDFIFGAGGSAYQCEGAYNEGNRG 68
Query: 64 ENIWDHLVHTQPDLVKDRQNADVACDSYHKYKEDVALIRDIGFQVYRFSLSWSRILPTG- 122
+IWD P + D N + A + YH YKED+ +++ G + YRFS+SWSR+LP G
Sbjct: 69 PSIWDTFTQRSPAKISDGSNGNQAINCYHMYKEDIKIMKQTGLESYRFSISWSRVLPGGR 128
Query: 123 DTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHYDLPQPLQ-EFGGWANPVVADYFESFA 181
+N+ GV++Y + I+E+L+ I+P VTL H+DLPQ L+ E+GG+ + + D F +A
Sbjct: 129 LAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLPQALEDEYGGFLSHRIVDDFCEYA 188
Query: 182 DVAFKTFGDKVPYWITINEPLDV-MGGYGYKSGAPYLNLSGLGGD-----YLVAHNLLRA 235
+ F FGDK+ YW T NEP + GY AP G GD Y+V HN+L A
Sbjct: 189 EFCFWEFGDKIKYWTTFNEPHTFAVNGYALGEFAPGRGGKGDEGDPAIEPYVVTHNILLA 248
Query: 236 HAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYS 295
H A Y K++ Q+G++ I L+S P + + D +A +R F LG F P+ +
Sbjct: 249 HKAAVEEYRNKFQKCQEGEIGIVLNSMWMEPLS-DVQADIDAQKRALDFMLGWFLEPLTT 307
Query: 296 EAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNH 355
GDYP +R++V + RLP+F+ ++ + LKG +DF +N+YT+ + N
Sbjct: 308 --GDYPKSMRELV----------KGRLPKFSADDSEKLKGCYDFIGMNYYTATYVTNAVK 355
Query: 356 TSNAPPSTINDRAATFSQD----PNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFIT 411
+++ S D T + + P + W VVP G LL + K+ Y+ P +++T
Sbjct: 356 SNSEKLSYETDDQVTKTFERNQKPIGHALYGGWQHVVPWGLYKLLVYTKETYHVPVLYVT 415
Query: 412 ENGFSD--------DGRLDDEGRIDYY 430
E+G + D R DY+
Sbjct: 416 ESGMVEENKTKILLSEARRDAERTDYH 442
Score = 301 bits (774), Expect = 5e-92
Identities = 87/284 (30%), Positives = 135/284 (47%), Gaps = 62/284 (21%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
+G +IWD +PA + D NG+ A + YH YKED+ I+K G + YRFS+SWSR+LP
Sbjct: 66 NRGPSIWDTFTQRSPAKISDGSNGNQAINCYHMYKEDIKIMKQTGLESYRFSISWSRVLP 125
Query: 747 TGDI-DKINEKGVQYYRNLIDELLLNNIQPM----------------------------- 776
G + +N+ GV++Y + IDELL N I+P
Sbjct: 126 GGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLPQALEDEYGGFLSHRIVDDFC 185
Query: 777 -------------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVGGE-----YLAAHNL 817
+K W T E A+ GY +AP G G+ Y+ HN+
Sbjct: 186 EYAEFCFWEFGDKIKYWTTFNEPHTFAVNGYALGEFAPGRGGKGDEGDPAIEPYVVTHNI 245
Query: 818 LRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHP 877
L +H A Y K++ Q+G++ + LN+ + PL + D +A +R + F G F P
Sbjct: 246 LLAHKAAVEEYRNKFQKCQEGEIGIVLNSMWMEPLSD-VQADIDAQKRALDFMLGWFLEP 304
Query: 878 IYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
+ + GDYP +R++V + RLP+F+ ++ + LKG
Sbjct: 305 LTT--GDYPKSMRELV----------KGRLPKFSADDSEKLKGC 336
Score = 164 bits (418), Expect = 3e-43
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 432 FQVYRFSLSWSRILPTGDI-DKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
+ YRFS+SWSR+LP G + +N+ GV++Y + IDELL N I+P VTL+HWDLPQ L+D
Sbjct: 111 LESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLPQALED 170
Query: 491 -FGGWTNAIIADYFETYADFAYKTFGDK 517
+GG+ + I D F YA+F + FGDK
Sbjct: 171 EYGGFLSHRIVDDFCEYAEFCFWEFGDK 198
Score = 126 bits (320), Expect = 1e-30
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSPE-PSFRNDANVVLSDDRK----WPKGASFWLKVVPDG 620
+D+ G+N+YT+ V+ + + E S+ D V + +R W VVP G
Sbjct: 336 CYDFIGMNYYTATYVTNAVKSNSEKLSYETDDQVTKTFERNQKPIGHALYGGWQHVVPWG 395
Query: 621 FRALLNWIKKEYNNPPVFITENGFSD--------DGQLDDQGRVDFYQG 661
LL + K+ Y+ P +++TE+G + D R D++Q
Sbjct: 396 LYKLLVYTKETYHVPVLYVTESGMVEENKTKILLSEARRDAERTDYHQK 444
Score = 90.3 bits (225), Expect = 8e-19
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 14/96 (14%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS-------SFDY 569
+K+L +++ A ++D N+ GY WS DNFEW GY CR+GI+HVD+ S S +
Sbjct: 443 QKHLASVRDA-IDDGVNVKGYFVWSFFDNFEWNLGYICRYGIIHVDYKSFERYPKESAIW 501
Query: 570 FGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRK 605
Y +F+ + K+ SP R +A V L +K
Sbjct: 502 -----YKNFI-AGKSTTSPAKRRREEAQVELVKRQK 531
Score = 69.2 bits (170), Expect = 3e-12
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
K+L ++ AI +D NV GY WS DNFEW GY
Sbjct: 443 QKHLASVRDAI-DDGVNVKGYFVWSFFDNFEWNLGYI 478
>3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase,
hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A*
3ptq_A*
Length = 505
Score = 569 bits (1469), Expect = 0.0
Identities = 173/423 (40%), Positives = 248/423 (58%), Gaps = 38/423 (8%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
+++ FP GF++G +++++Q EG E G+G +IWD H P+ + DR N DVA DSYH
Sbjct: 29 VSRRSFPKGFIFGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPEKIADRSNGDVASDSYH 88
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGD-TDRINEKGVQYYRNLINEVLSKNIQPMV 151
YKEDV L++D+G YRFS+SW+RILP G +N++G++YY NLINE+LSK +QP +
Sbjct: 89 LYKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFI 148
Query: 152 TLNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYG 209
TL H+D PQ L+ ++ G+ +P + + F+ +A++ FK FGD+V WIT NEP GY
Sbjct: 149 TLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYA 208
Query: 210 YKSGAP-----YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITL 259
AP + + GD Y H+ L AHA+ RLY+ KY++LQKGK+ ITL
Sbjct: 209 TGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITL 268
Query: 260 DSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRAR 319
S + P + SK + +AA+R F G F P+ GDYP +R +V
Sbjct: 269 VSHWFVPFSR-SKSNNDAAKRAIDFMFGWFMDPLIR--GDYPLSMRGLV----------G 315
Query: 320 SRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFS----QDP 375
+RLP+FT+E+ K +KG+FDF LN+YT+ N ++ S D A + P
Sbjct: 316 NRLPQFTKEQSKLVKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIP 375
Query: 376 NWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD--------DGRLDDEGRI 427
P + SPWL V P GFR LL ++K+ Y NP V+ITENG + L D+ RI
Sbjct: 376 IGPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARI 435
Query: 428 DYY 430
+YY
Sbjct: 436 EYY 438
Score = 299 bits (769), Expect = 1e-91
Identities = 104/289 (35%), Positives = 145/289 (50%), Gaps = 67/289 (23%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+G +IWD H +P + D+ NGDVA DSYH YKEDV ++KD+G YRFS+SW+RILP
Sbjct: 57 GRGPSIWDTFTHQHPEKIADRSNGDVASDSYHLYKEDVRLMKDMGMDAYRFSISWTRILP 116
Query: 747 TGDI-DKINEKGVQYYRNLIDELLLNNIQPM----------------------------- 776
G + +N++G++YY NLI+ELL +QP
Sbjct: 117 NGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSPQALEDKYNGFLSPNIINDFK 176
Query: 777 -------------VKLWITIKETLE-AMQGYDFKTYAP-----YLSMTGVGGE-----YL 812
VK WIT E GY +AP + G+ Y
Sbjct: 177 DYAEICFKEFGDRVKNWITFNEPWTFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYT 236
Query: 813 AAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFG 872
A H+ L +HA+ RLY+ KY+ QKGK+ +TL +H+ P SK + +AA+R I F FG
Sbjct: 237 ACHHQLLAHAETVRLYKAKYQALQKGKIGITLVSHWFVPFSR-SKSNNDAAKRAIDFMFG 295
Query: 873 LFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
F P+ GDYP +R +V +RLP+FT+E+ K +KG
Sbjct: 296 WFMDPLIR--GDYPLSMRGLV----------GNRLPQFTKEQSKLVKGA 332
Score = 164 bits (417), Expect = 3e-43
Identities = 41/88 (46%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Query: 432 FQVYRFSLSWSRILPTGDI-DKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
YRFS+SW+RILP G + +N++G++YY NLI+ELL +QP +TL+HWD PQ L+D
Sbjct: 102 MDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSPQALED 161
Query: 491 -FGGWTNAIIADYFETYADFAYKTFGDK 517
+ G+ + I + F+ YA+ +K FGD+
Sbjct: 162 KYNGFLSPNIINDFKDYAEICFKEFGDR 189
Score = 127 bits (321), Expect = 5e-31
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSP-EPSFRNDANVVLSDDRK----WPKGASFWLKVVPDG 620
+FD+ GLN+YT+ + S+ D+ L+ R P+ AS WL V P G
Sbjct: 332 AFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQAASPWLYVYPQG 391
Query: 621 FRALLNWIKKEYNNPPVFITENGFSD--------DGQLDDQGRVDFYQG 661
FR LL ++K+ Y NP V+ITENG + L D R+++Y
Sbjct: 392 FRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHK 440
Score = 88.4 bits (220), Expect = 3e-18
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
K+L ++ A + D N+ GY AWS+LDNFEW +GYT RFGI VD++
Sbjct: 439 HKHLLSLLSA-IRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYND 486
Score = 69.1 bits (170), Expect = 3e-12
Identities = 23/37 (62%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
+K+L +L AI D NV GY AWSLLDNFEW GYT
Sbjct: 439 HKHLLSLLSAI-RDGANVKGYFAWSLLDNFEWSNGYT 474
>1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A
{Trifolium repens} SCOP: c.1.8.4
Length = 490
Score = 567 bits (1464), Expect = 0.0
Identities = 183/425 (43%), Positives = 249/425 (58%), Gaps = 38/425 (8%)
Query: 31 TQMNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDS 90
+ +N+ F PGF++G +++AFQ EGA EDGKG +IWD H P+ +KDR N DVA D
Sbjct: 12 SDLNRSCFAPGFVFGTASSAFQYEGAAFEDGKGPSIWDTFTHKYPEKIKDRTNGDVAIDE 71
Query: 91 YHKYKEDVALIRDIGFQVYRFSLSWSRILPTG-DTDRINEKGVQYYRNLINEVLSKNIQP 149
YH+YKED+ +++D+ YRFS+SW R+LP G + +N +G+ YY NLINEVL+ +QP
Sbjct: 72 YHRYKEDIGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQP 131
Query: 150 MVTLNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGG 207
VTL H+D+PQ L+ E+ G+ + D F +A++ FK FGD+V +WIT+NEP V M
Sbjct: 132 YVTLFHWDVPQALEDEYRGFLGRNIVDDFRDYAELCFKEFGDRVKHWITLNEPWGVSMNA 191
Query: 208 YGYKSGAP-----YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSI 257
Y Y + AP +L L+ GGD YL AH L AHA A RLY+ KY++ Q G + I
Sbjct: 192 YAYGTFAPGRCSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLYKTKYQASQNGIIGI 251
Query: 258 TLDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGR 317
TL S + P + K D +AA+R F LG F HP+ G YP +R +V
Sbjct: 252 TLVSHWFEPAS-KEKADVDAAKRGLDFMLGWFMHPLTK--GRYPESMRYLV--------- 299
Query: 318 ARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQD--- 374
R RLP+F+ EE K L GSFDF LN+Y+S A NA P+ D + +
Sbjct: 300 -RKRLPKFSTEESKELTGSFDFLGLNYYSSYYAAKAPRIPNARPAIQTDSLINATFEHNG 358
Query: 375 -PNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD--------DGRLDDEG 425
P P + S WL + P G R LL ++K YNNP ++ITENG ++ L D
Sbjct: 359 KPLGPMAASSWLCIYPQGIRKLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLDTP 418
Query: 426 RIDYY 430
RIDYY
Sbjct: 419 RIDYY 423
Score = 297 bits (764), Expect = 5e-91
Identities = 103/289 (35%), Positives = 139/289 (48%), Gaps = 67/289 (23%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKG +IWD H P + D+ NGDVA D YH+YKED+ I+KD+ YRFS+SW R+LP
Sbjct: 42 GKGPSIWDTFTHKYPEKIKDRTNGDVAIDEYHRYKEDIGIMKDMNLDAYRFSISWPRVLP 101
Query: 747 TGDI-DKINEKGVQYYRNLIDELLLNNIQPM----------------------------- 776
G + +N +G+ YY NLI+E+L N +QP
Sbjct: 102 KGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHWDVPQALEDEYRGFLGRNIVDDFR 161
Query: 777 -------------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVG----------GEYL 812
VK WIT+ E +M Y + T+AP + YL
Sbjct: 162 DYAELCFKEFGDRVKHWITLNEPWGVSMNAYAYGTFAPGRCSDWLKLNCTGGDSGREPYL 221
Query: 813 AAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFG 872
AAH L +HA A RLY+ KY+ SQ G + +TL +H+ P K D +AA+R + F G
Sbjct: 222 AAHYQLLAHAAAARLYKTKYQASQNGIIGITLVSHWFEPASK-EKADVDAAKRGLDFMLG 280
Query: 873 LFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
F HP+ G YP +R +V R RLP+F+ EE K L G
Sbjct: 281 WFMHPLTK--GRYPESMRYLV----------RKRLPKFSTEESKELTGS 317
Score = 163 bits (416), Expect = 3e-43
Identities = 42/88 (47%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 432 FQVYRFSLSWSRILPTGDI-DKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
YRFS+SW R+LP G + +N +G+ YY NLI+E+L N +QP VTL+HWD+PQ L+D
Sbjct: 87 LDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHWDVPQALED 146
Query: 491 -FGGWTNAIIADYFETYADFAYKTFGDK 517
+ G+ I D F YA+ +K FGD+
Sbjct: 147 EYRGFLGRNIVDDFRDYAELCFKEFGDR 174
Score = 126 bits (319), Expect = 1e-30
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 566 SFDYFGLNHYTSFLVSKKTE-PSPEPSFRNDANVVLSDDRK----WPKGASFWLKVVPDG 620
SFD+ GLN+Y+S+ +K P+ P+ + D+ + + + P AS WL + P G
Sbjct: 317 SFDFLGLNYYSSYYAAKAPRIPNARPAIQTDSLINATFEHNGKPLGPMAASSWLCIYPQG 376
Query: 621 FRALLNWIKKEYNNPPVFITENGFSD--------DGQLDDQGRVDFYQG 661
R LL ++K YNNP ++ITENG ++ L D R+D+Y
Sbjct: 377 IRKLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLDTPRIDYYYR 425
Score = 88.8 bits (221), Expect = 2e-18
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
++L + A + D N+ GY AWS+ DN EW GYT RFG+V VDF +
Sbjct: 424 YRHLYYVLTA-IGDGVNVKGYFAWSLFDNMEWDSGYTVRFGLVFVDFKN 471
Score = 68.7 bits (169), Expect = 4e-12
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++L + AI D NV GY AWSL DN EW GYT
Sbjct: 424 YRHLYYVLTAI-GDGVNVKGYFAWSLFDNMEWDSGYT 459
>3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET:
LB2 MES; 1.37A {Oryza sativa japonica group} PDB:
3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A*
2rgl_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A*
Length = 481
Score = 565 bits (1458), Expect = 0.0
Identities = 169/417 (40%), Positives = 230/417 (55%), Gaps = 35/417 (8%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
+++ FP F++G T+A+QVEG G+G +IWD HT P V QN DVA D YH
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHT-PGNVAGNQNGDVATDQYH 73
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
+YKEDV L++ + F YRFS+SWSRI P G R+N++GV YY NLIN +L K I P V
Sbjct: 74 RYKEDVNLMKSLNFDAYRFSISWSRIFPDG-EGRVNQEGVAYYNNLINYLLQKGITPYVN 132
Query: 153 LNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYK 211
L HYDLP L+ ++GGW N +AD F +AD FKTFG++V +W T N+P ++ GY
Sbjct: 133 LYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNQPR-IVALLGYD 191
Query: 212 SG--APYLNLSGLGGD------YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCN 263
G P G Y+VAHN L +HA A Y KY++ Q+GKV I LD
Sbjct: 192 QGTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNW 251
Query: 264 YYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLP 323
Y + S EDQ AA+R F +G + P+ + G YP I++ +V + RLP
Sbjct: 252 YEALS-NSTEDQAAAQRARDFHIGWYLDPLIN--GHYPQIMQDLV----------KDRLP 298
Query: 324 RFTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQ----DPNWPS 379
+FT E+ + +KGS D+ +N YT+ + P S D T+ P P
Sbjct: 299 KFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQ 358
Query: 380 SNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD------DGRLDDEGRIDYY 430
+NS WL +VP G +N+IK++Y NP V ITENG D L D R+ +Y
Sbjct: 359 ANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFY 415
Score = 294 bits (756), Expect = 6e-90
Identities = 102/284 (35%), Positives = 137/284 (48%), Gaps = 64/284 (22%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+G +IWD HT P V QNGDVA D YH+YKEDV ++K L F YRFS+SWSRI P
Sbjct: 43 GRGPSIWDAFAHT-PGNVAGNQNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFP 101
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
G+ ++N++GV YY NLI+ LL I P
Sbjct: 102 DGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTE 160
Query: 777 ------------VKLWITIKETLE-AMQGYDFKTYAP-YLSMTGVGGE-----YLAAHNL 817
VK W T + A+ GYD T P + GG Y+ AHN
Sbjct: 161 YADFCFKTFGNRVKHWFTFNQPRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYIVAHNF 220
Query: 818 LRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHP 877
L SHA A Y KY+ +Q+GKV + L+ ++ L S EDQ AA+R F G + P
Sbjct: 221 LLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSN-STEDQAAAQRARDFHIGWYLDP 279
Query: 878 IYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
+ + G YP I++ +V + RLP+FT E+ + +KG
Sbjct: 280 LIN--GHYPQIMQDLV----------KDRLPKFTPEQARLVKGS 311
Score = 165 bits (419), Expect = 1e-43
Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD- 490
F YRFS+SWSRI P G+ ++N++GV YY NLI+ LL I P V LYH+DLP L+
Sbjct: 87 FDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKK 145
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
+GGW NA +AD F YADF +KTFG++
Sbjct: 146 YGGWLNAKMADLFTEYADFCFKTFGNR 172
Score = 126 bits (319), Expect = 8e-31
Identities = 37/109 (33%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 564 SSSFDYFGLNHYTSFLVSKKTEPSPEP-SFRNDANVVLSDDRK----WPKGASFWLKVVP 618
S DY G+N YT+ + + P S+ D V + P+ S WL +VP
Sbjct: 309 KGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVP 368
Query: 619 DGFRALLNWIKKEYNNPPVFITENGFSD------DGQLDDQGRVDFYQG 661
G +N+IK++Y NP V ITENG D L D RV FY+
Sbjct: 369 WGMYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYRS 417
Score = 88.0 bits (219), Expect = 3e-18
Identities = 28/49 (57%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ YLT ++KA +++ N+ GY AWS+LDNFEWL GYT +FGIV+VDF++
Sbjct: 416 RSYLTQLKKA-IDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFNT 463
Score = 68.7 bits (169), Expect = 4e-12
Identities = 25/37 (67%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
YLT L KAI ++ NV GY AWSLLDNFEWL GYT
Sbjct: 416 RSYLTQLKKAI-DEGANVAGYFAWSLLDNFEWLSGYT 451
>2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum
aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A*
3aiw_A*
Length = 565
Score = 565 bits (1459), Expect = 0.0
Identities = 161/422 (38%), Positives = 231/422 (54%), Gaps = 39/422 (9%)
Query: 34 NKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHK 93
+ F FL+G ST+A+Q+EGAWNEDGKG + WDH HT P+ + D N DVA +SYH
Sbjct: 70 KRDWFDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTNGDVAANSYHL 129
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTL 153
Y+EDV ++D+G +VYRFS+SWSRILP G T ++N+ G+ YY LIN ++ +I P VT+
Sbjct: 130 YEEDVKALKDMGMKVYRFSISWSRILPDG-TGKVNQAGIDYYNKLINSLIDNDIVPYVTI 188
Query: 154 NHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYGYK 211
H+D PQ L+ ++GG+ N + D ++ FA+V FK FGD+V W T NEP YG
Sbjct: 189 WHWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNEPHTYCCFSYGEG 248
Query: 212 SGAPYLNLSGLGGD----------YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDS 261
AP G+ Y H++L AHA+A +L++ +Y K+ + D
Sbjct: 249 IHAPGRCSPGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDV 308
Query: 262 CNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSR 321
Y P+ S D +A ER + +G F P+ GDYP +R ++ R
Sbjct: 309 MGYEPYQ-DSFLDDQARERSIDYNMGWFLEPVVR--GDYPFSMRSLI----------GDR 355
Query: 322 LPRFTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQ------DP 375
LP FT+EE + L S D LN+YTS + + + + P+ D A S+ +
Sbjct: 356 LPMFTKEEQEKLASSCDIMGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTGSDGND 415
Query: 376 NWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD-------DGRLDDEGRID 428
P + + W+ + P G LL +K++Y NPPVFITENG +D LDD R+D
Sbjct: 416 IGPITGTYWIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDESMPDPLDDWKRLD 475
Query: 429 YY 430
Y
Sbjct: 476 YL 477
Score = 301 bits (773), Expect = 2e-91
Identities = 90/288 (31%), Positives = 125/288 (43%), Gaps = 67/288 (23%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKG + WD HT P + D NGDVA +SYH Y+EDV +KD+G +VYRFS+SWSRILP
Sbjct: 97 GKGPSTWDHFCHTYPERISDMTNGDVAANSYHLYEEDVKALKDMGMKVYRFSISWSRILP 156
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
G K+N+ G+ YY LI+ L+ N+I P
Sbjct: 157 DGT-GKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQ 215
Query: 777 ------------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVGGE----------YLA 813
VK W T E Y +AP G+ Y A
Sbjct: 216 FAEVCFKNFGDRVKNWFTFNEPHTYCCFSYGEGIHAPGRCSPGMDCAVPEGDSLREPYTA 275
Query: 814 AHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGL 873
H++L +HA+A +L++ +Y K+ + + P S D +A ER I + G
Sbjct: 276 GHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYEPYQD-SFLDDQARERSIDYNMGW 334
Query: 874 FAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
F P+ GDYP +R ++ RLP FT+EE + L
Sbjct: 335 FLEPVVR--GDYPFSMRSLI----------GDRLPMFTKEEQEKLASS 370
Score = 164 bits (418), Expect = 5e-43
Identities = 43/87 (49%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD- 490
+VYRFS+SWSRILP G K+N+ G+ YY LI+ L+ N+I P VT++HWD PQ L+D
Sbjct: 142 MKVYRFSISWSRILPDGT-GKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQALEDK 200
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
+GG+ N I D ++ +A+ +K FGD+
Sbjct: 201 YGGFLNRQIVDDYKQFAEVCFKNFGDR 227
Score = 122 bits (308), Expect = 5e-29
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 566 SFDYFGLNHYTSFLVS-KKTEPSPEPSFRNDANVVLSDDRK------WPKGASFWLKVVP 618
S D GLN+YTS P P+ D S+ P ++W+ + P
Sbjct: 370 SCDIMGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTGSDGNDIGPITGTYWIYMYP 429
Query: 619 DGFRALLNWIKKEYNNPPVFITENGFSD-------DGQLDDQGRVDFYQG 661
G LL +K++Y NPPVFITENG +D LDD R+D+ Q
Sbjct: 430 KGLTDLLLIMKEKYGNPPVFITENGIADVEGDESMPDPLDDWKRLDYLQR 479
Score = 88.5 bits (220), Expect = 3e-18
Identities = 16/49 (32%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+++++A++ A ++ ++ G+ W ++DNFEW GY+ RFG+V++D +
Sbjct: 478 QRHISAVKDA-IDQGADVRGHFTWGLIDNFEWSLGYSSRFGLVYIDKND 525
Score = 69.2 bits (170), Expect = 3e-12
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 951 YLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
+++A+ AI + +V G+ W L+DNFEW GY+
Sbjct: 480 HISAVKDAI-DQGADVRGHFTWGLIDNFEWSLGYS 513
>1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis,
PEST defense, family GH1, hydrolase; 1.9A {Sorghum
bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A*
Length = 565
Score = 560 bits (1446), Expect = 0.0
Identities = 158/424 (37%), Positives = 223/424 (52%), Gaps = 41/424 (9%)
Query: 34 NKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHK 93
+ FPP FL+G +T+A+Q+EGAWNEDGKG + WDH H P+ + DR N DVA DSYH
Sbjct: 72 RRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDVAADSYHM 131
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTG-DTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
Y EDV L++++G YRFS+SW RILP G INEK V+YY LI+ +L I+P +T
Sbjct: 132 YAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYIT 191
Query: 153 LNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYGY 210
+ H+D PQ L +GG+ + + + FA V F+ FG V W+T NEP YG
Sbjct: 192 IFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNEPETFCSVSYGT 251
Query: 211 KSGAP-----YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLD 260
AP ++ + G+ Y+VAHNLLRAHA+ +Y KY G++ + L+
Sbjct: 252 GVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIY-NKYHKGADGRIGLALN 310
Query: 261 SCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARS 320
P+ + DQ+A ER LG F P+ GDYP +R R
Sbjct: 311 VFGRVPYT-NTFLDQQAQERSMDKCLGWFLEPVVR--GDYPFSMRVSA----------RD 357
Query: 321 RLPRFTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQD------ 374
R+P F E+E + L GS+D +N+YTS + + + N P D A +
Sbjct: 358 RVPYFKEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGN 417
Query: 375 PNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD--------DGRLDDEGR 426
P + + W+ + P G +L +K +Y NPP++ITENG D L+D R
Sbjct: 418 AIGPPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTR 477
Query: 427 IDYY 430
+DY
Sbjct: 478 LDYI 481
Score = 298 bits (764), Expect = 4e-90
Identities = 98/289 (33%), Positives = 124/289 (42%), Gaps = 68/289 (23%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKG + WD H P +VD+ NGDVA DSYH Y EDV ++K++G YRFS+SW RILP
Sbjct: 99 GKGPSTWDHFCHNFPEWIVDRSNGDVAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILP 158
Query: 747 TGDI-DKINEKGVQYYRNLIDELLLNNIQPM----------------------------- 776
G + INEK V+YY LID LL N I+P
Sbjct: 159 KGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYT 218
Query: 777 -------------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVGGE----------YL 812
VK W+T E Y AP GV Y+
Sbjct: 219 DFAKVCFEKFGKTVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYI 278
Query: 813 AAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFG 872
AHNLLR+HA+ +Y KY G++ L LN P + DQ+A ER + G
Sbjct: 279 VAHNLLRAHAETVDIY-NKYHKGADGRIGLALNVFGRVPYTN-TFLDQQAQERSMDKCLG 336
Query: 873 LFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
F P+ GDYP +R R R+P F E+E + L G
Sbjct: 337 WFLEPVVR--GDYPFSMRVSA----------RDRVPYFKEKEQEKLVGS 373
Score = 163 bits (416), Expect = 9e-43
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 432 FQVYRFSLSWSRILPTGDI-DKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
YRFS+SW RILP G + INEK V+YY LID LL N I+P +T++HWD PQ L D
Sbjct: 144 MDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTPQALVD 203
Query: 491 -FGGWTNAIIADYFETYADFAYKTFGDK 517
+GG+ + I + +A ++ FG
Sbjct: 204 AYGGFLDERIIKDYTDFAKVCFEKFGKT 231
Score = 122 bits (309), Expect = 4e-29
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 15/111 (13%)
Query: 566 SFDYFGLNHYTSFLVS-KKTEPSPEPSFRNDANVVLSDDRK------WPKGASFWLKVVP 618
S+D G+N+YTS P+ P D + + P + W+ + P
Sbjct: 373 SYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPTGNAWINMYP 432
Query: 619 DGFRALLNWIKKEYNNPPVFITENGFSD--------DGQLDDQGRVDFYQG 661
G +L +K +Y NPP++ITENG D L+D R+D+ Q
Sbjct: 433 KGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQR 483
Score = 88.1 bits (219), Expect = 4e-18
Identities = 22/49 (44%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+++L+ ++++ ++ ++ GY AWS+LDNFEW GYT RFGIV+VD +
Sbjct: 482 QRHLSVLKQS-IDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDREN 529
Score = 69.2 bits (170), Expect = 3e-12
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 951 YLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
+L+ L ++I + +V GY AWSLLDNFEW GYT
Sbjct: 484 HLSVLKQSI-DLGADVRGYFAWSLLDNFEWSSGYT 517
>3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase;
HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A*
3gnr_A*
Length = 488
Score = 557 bits (1438), Expect = 0.0
Identities = 168/424 (39%), Positives = 242/424 (57%), Gaps = 41/424 (9%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
+ + FP GF++G ++AA+Q EGA EDG+G+ IWD HT + D NADVA D YH
Sbjct: 12 LTRGSFPEGFVFGTASAAYQYEGAVKEDGRGQTIWDTFAHT-FGKITDFSNADVAVDQYH 70
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
+++ED+ L+ D+G YRFS++WSRI P G ++N+ G+ +Y LI+ +L+K IQP VT
Sbjct: 71 RFEEDIQLMADMGMDAYRFSIAWSRIYPNG-VGQVNQAGIDHYNKLIDALLAKGIQPYVT 129
Query: 153 LNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYGY 210
L H+DLPQ L+ ++ GW + + D F ++A+ F+ FGD+V +WIT+NEP V + GY
Sbjct: 130 LYHWDLPQALEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKHWITLNEPHTVAIQGYDA 189
Query: 211 KSGAP-----YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLD 260
AP L+L G+ Y+VAH+ + AHA A +Y KYK+ Q G++ I D
Sbjct: 190 GLQAPGRCSVLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIYRTKYKATQNGQLGIAFD 249
Query: 261 SCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARS 320
+ P + + D EAA+R +F LG FA P + GDYP +R V
Sbjct: 250 VMWFEPMSN-TTIDIEAAKRAQEFQLGWFADPFFF--GDYPATMRARV----------GE 296
Query: 321 RLPRFTEEEIKALKGSFDFFALNHYTSILIANN--NHTSNAPPSTINDRAATFSQ----D 374
RLPRFT +E +KG+ DF +NHYT+ +N N +T+ D
Sbjct: 297 RLPRFTADEAAVVKGALDFVGINHYTTYYTRHNNTNIIGTLLNNTLADTGTVSLPFKNGK 356
Query: 375 PNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD--------DGRLDDEGR 426
P +NS WL +VP G R+L+N++K+ YN+PPV+ITENG D L D R
Sbjct: 357 PIGDRANSIWLYIVPRGMRSLMNYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKR 416
Query: 427 IDYY 430
I Y+
Sbjct: 417 IKYH 420
Score = 293 bits (753), Expect = 2e-89
Identities = 93/288 (32%), Positives = 133/288 (46%), Gaps = 68/288 (23%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+G+ IWD HT + D N DVA D YH+++ED+ ++ D+G YRFS++WSRI P
Sbjct: 40 GRGQTIWDTFAHT-FGKITDFSNADVAVDQYHRFEEDIQLMADMGMDAYRFSIAWSRIYP 98
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
G ++N+ G+ +Y LID LL IQP
Sbjct: 99 NGV-GQVNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQALEDKYKGWLDRQIVDDFAA 157
Query: 777 ------------VKLWITIKETLE-AMQGYDFKTYAP-----YLSMTGVGGE-----YLA 813
VK WIT+ E A+QGYD AP L + G Y+
Sbjct: 158 YAETCFREFGDRVKHWITLNEPHTVAIQGYDAGLQAPGRCSVLLHLYCKAGNSGTEPYVV 217
Query: 814 AHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGL 873
AH+ + +HA A +Y KYK +Q G++ + + + P+ + D EAA+R +F+ G
Sbjct: 218 AHHFILAHAAAASIYRTKYKATQNGQLGIAFDVMWFEPMSN-TTIDIEAAKRAQEFQLGW 276
Query: 874 FAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
FA P + GDYP +R V RLPRFT +E +KG
Sbjct: 277 FADPFFF--GDYPATMRARV----------GERLPRFTADEAAVVKGA 312
Score = 165 bits (420), Expect = 9e-44
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD- 490
YRFS++WSRI P G ++N+ G+ +Y LID LL IQP VTLYHWDLPQ L+D
Sbjct: 84 MDAYRFSIAWSRIYPNGV-GQVNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQALEDK 142
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK 517
+ GW + I D F YA+ ++ FGD+
Sbjct: 143 YKGWLDRQIVDDFAAYAETCFREFGDR 169
Score = 124 bits (313), Expect = 6e-30
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 15/111 (13%)
Query: 566 SFDYFGLNHYTSFLVSKKTEP---SPEPSFRNDANVVLSDDRK----WPKGASFWLKVVP 618
+ D+ G+NHYT++ + + D V + + S WL +VP
Sbjct: 312 ALDFVGINHYTTYYTRHNNTNIIGTLLNNTLADTGTVSLPFKNGKPIGDRANSIWLYIVP 371
Query: 619 DGFRALLNWIKKEYNNPPVFITENGFSD--------DGQLDDQGRVDFYQG 661
G R+L+N++K+ YN+PPV+ITENG D L D R+ ++
Sbjct: 372 RGMRSLMNYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKRIKYHND 422
Score = 91.4 bits (228), Expect = 3e-19
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
YLT + ++ D C++ GY AWS+LDN+EW GY+ RFG+ VD+
Sbjct: 421 NDYLTNLAASIKEDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKD 469
Score = 73.3 bits (181), Expect = 2e-13
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 951 YLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
YLT L+ +I ED C+V GY AWSLLDN+EW GY+
Sbjct: 423 YLTNLAASIKEDGCDVRGYFAWSLLDNWEWAAGYS 457
>1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor,
PEST defense, family GH1, hydrolase, chloroplast,
transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays}
SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A*
1e1e_A 1e1f_A* 1h49_A* 1hxj_A
Length = 512
Score = 554 bits (1429), Expect = 0.0
Identities = 160/429 (37%), Positives = 230/429 (53%), Gaps = 46/429 (10%)
Query: 34 NKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHK 93
+ FP F +G +T+A+Q+EGAWNEDGKGE+ WDH H P+ + D N+D+ +SYH
Sbjct: 20 QRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNSDIGANSYHM 79
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGDTD-RINEKGVQYYRNLINEVLSKNIQPMVT 152
YK DV L++++G YRFS+SW RILP G + IN G++YYRNLIN +L I+P VT
Sbjct: 80 YKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVT 139
Query: 153 LNHYDLPQPLQ-EFGGWANPVVA---DYFESFADVAFKTFGDKVPYWITINEPLDV-MGG 207
+ H+D+PQ L+ ++GG+ + + + FA V F FGDKV W+T N+P
Sbjct: 140 IFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSFS 199
Query: 208 YGYKSGAP-----YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSI 257
YG AP L+ + G+ Y HN+L AHA+A LY K YK ++ +
Sbjct: 200 YGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKR-DDTRIGL 258
Query: 258 TLDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGR 317
D P+ TS D++A ER + LG F P+ GDYP +R +
Sbjct: 259 AFDVMGRVPYG-TSFLDKQAEERSWDINLGWFLEPVVR--GDYPFSMRSLA--------- 306
Query: 318 ARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQ---- 373
R RLP F +E+ + L GS++ LN+YTS N + + N P D A +
Sbjct: 307 -RERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQEVNGP 365
Query: 374 --DPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD----------DGRL 421
P P +PW+ + P+G + LL +K +Y NPP++ITENG D + L
Sbjct: 366 DGKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAAL 425
Query: 422 DDEGRIDYY 430
+D R+DY
Sbjct: 426 NDYKRLDYI 434
Score = 294 bits (755), Expect = 2e-89
Identities = 89/292 (30%), Positives = 123/292 (42%), Gaps = 71/292 (24%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKGE+ WD H +P ++D N D+ +SYH YK DV ++K++G YRFS+SW RILP
Sbjct: 47 GKGESNWDHFCHNHPERILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILP 106
Query: 747 TGDID-KINEKGVQYYRNLIDELLLNNIQPM----------------------------- 776
G + IN G++YYRNLI+ LL N I+P
Sbjct: 107 KGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVE 166
Query: 777 ----------------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVGGE--------- 810
VK W+T + Y +AP G+
Sbjct: 167 DYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLVE 226
Query: 811 -YLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQF 869
Y A HN+L +HA+A LY K YK ++ L + P S D++A ER
Sbjct: 227 PYTAGHNILLAHAEAVDLYNKHYK-RDDTRIGLAFDVMGRVPYGT-SFLDKQAEERSWDI 284
Query: 870 KFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
G F P+ GDYP +R + R RLP F +E+ + L G
Sbjct: 285 NLGWFLEPVVR--GDYPFSMRSLA----------RERLPFFKDEQKEKLAGS 324
Score = 159 bits (405), Expect = 1e-41
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
Query: 432 FQVYRFSLSWSRILPTGDID-KINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
YRFS+SW RILP G + IN G++YYRNLI+ LL N I+P VT++HWD+PQ L++
Sbjct: 92 MDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVPQALEE 151
Query: 491 -FGGWTN---AIIADYFETYADFAYKTFGDK 517
+GG+ + I + + +A + FGDK
Sbjct: 152 KYGGFLDKSHKSIVEDYTYFAKVCFDNFGDK 182
Score = 120 bits (304), Expect = 1e-28
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 17/113 (15%)
Query: 566 SFDYFGLNHYTSFLVS-KKTEPSPEPSFRNDANVVLSDDRK------WPKGASFWLKVVP 618
S++ GLN+YTS P+ P D + P + W+ + P
Sbjct: 324 SYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQEVNGPDGKPIGPPMGNPWIYMYP 383
Query: 619 DGFRALLNWIKKEYNNPPVFITENGFSD----------DGQLDDQGRVDFYQG 661
+G + LL +K +Y NPP++ITENG D + L+D R+D+ Q
Sbjct: 384 EGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQR 436
Score = 88.0 bits (219), Expect = 4e-18
Identities = 20/49 (40%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
++++ ++++ ++ N+ GY AWS+LDNFEW G+T R+GIV+VD ++
Sbjct: 435 QRHIATLKES-IDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 482
Score = 68.8 bits (169), Expect = 4e-12
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 951 YLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++ L ++I + NV GY AWSLLDNFEW G+T
Sbjct: 437 HIATLKESI-DLGSNVQGYFAWSLLDNFEWFAGFT 470
>4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A
{Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A*
Length = 540
Score = 553 bits (1426), Expect = 0.0
Identities = 162/444 (36%), Positives = 241/444 (54%), Gaps = 56/444 (12%)
Query: 31 TQMNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDS 90
T++++ FP F+ G ++A+Q+EG + G+G +IWD H +PD+++ N DVA DS
Sbjct: 15 TRISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVDS 74
Query: 91 YHKYKEDVALIRDIGFQVYRFSLSWSRILPTG-DTDRINEKGVQYYRNLINEVLSKNIQP 149
YH YKEDV +++++G YRFS+SWSR+LP G + +N++G+ YY NLI+ +L+ I+P
Sbjct: 75 YHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKP 134
Query: 150 MVTLNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGG 207
VTL H+D+PQ L+ E+GG+ +P + D F +A++ F FGD+V +W+T+NEP + G
Sbjct: 135 FVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVHG 194
Query: 208 YGYKSGAP----------------------YLNLSGLGGD-----YLVAHNLLRAHAKAY 240
Y AP G+ Y V H+LL AHA A
Sbjct: 195 YATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAV 254
Query: 241 RLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDY 300
LY+ K++ Q+G++ I+ + P + S D EAA R F LG F PI S GDY
Sbjct: 255 ELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITS--GDY 312
Query: 301 PPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAP 360
P +++ V SRLP+F+ E+ K LKGS+DF LN+YT+ + N + S+
Sbjct: 313 PKSMKKFV----------GSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGS 362
Query: 361 --PSTINDRAATFSQD----PNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENG 414
S D T+ D P P S S WL + P+G R +L + KK YN P +++TENG
Sbjct: 363 NNFSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENG 422
Query: 415 FSD--------DGRLDDEGRIDYY 430
D D R+ Y
Sbjct: 423 VDDVKNTNLTLSEARKDSMRLKYL 446
Score = 291 bits (747), Expect = 4e-88
Identities = 102/306 (33%), Positives = 138/306 (45%), Gaps = 83/306 (27%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+G +IWD H P + NGDVA DSYH YKEDV I+K+LG YRFS+SWSR+LP
Sbjct: 45 GRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYHLYKEDVNILKNLGLDAYRFSISWSRVLP 104
Query: 747 TGDID-KINEKGVQYYRNLIDELLLNNIQPM----------------------------- 776
G + +N++G+ YY NLID LL N I+P
Sbjct: 105 GGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVPQALEDEYGGFLSPRIVDDFC 164
Query: 777 -------------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVG-------------- 808
VK W+T+ E ++ GY YAP T
Sbjct: 165 EYAELCFWEFGDRVKHWMTLNEPWTFSVHGYATGLYAPGRGRTSPEHVNHPTVQHRCSTV 224
Query: 809 -------------GEYLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPS 855
Y H+LL +HA A LY+ K++ Q+G++ ++ T + P D +
Sbjct: 225 APQCICSTGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEPWDEN 284
Query: 856 SKEDQEAAERYIQFKFGLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEI 915
S D EAA R + F G F PI S GDYP +++ V SRLP+F+ E+
Sbjct: 285 SASDVEAAARALDFMLGWFMEPITS--GDYPKSMKKFV----------GSRLPKFSPEQS 332
Query: 916 KALKGK 921
K LKG
Sbjct: 333 KMLKGS 338
Score = 161 bits (410), Expect = 3e-42
Identities = 44/88 (50%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Query: 432 FQVYRFSLSWSRILPTGDID-KINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
YRFS+SWSR+LP G + +N++G+ YY NLID LL N I+P VTL+HWD+PQ L+D
Sbjct: 90 LDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVPQALED 149
Query: 491 -FGGWTNAIIADYFETYADFAYKTFGDK 517
+GG+ + I D F YA+ + FGD+
Sbjct: 150 EYGGFLSPRIVDDFCEYAELCFWEFGDR 177
Score = 123 bits (311), Expect = 2e-29
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 15/111 (13%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSP---EPSFRNDANVVLSDDRK----WPKGASFWLKVVP 618
S+D+ GLN+YT+ V+ + S S+ D +V DR P+ S WL + P
Sbjct: 338 SYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYP 397
Query: 619 DGFRALLNWIKKEYNNPPVFITENGFSD--------DGQLDDQGRVDFYQG 661
+G R +L + KK YN P +++TENG D D R+ + Q
Sbjct: 398 EGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEARKDSMRLKYLQD 448
Score = 89.7 bits (223), Expect = 1e-18
Identities = 23/49 (46%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ ++ +++A +ND N+ GY AWS+LDNFEW +GY RFGI+H+D++
Sbjct: 447 QDHIFNVRQA-MNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYND 494
Score = 69.6 bits (171), Expect = 2e-12
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++ + +A+ D NV GY AWSLLDNFEW GY
Sbjct: 447 QDHIFNVRQAM-NDGVNVKGYFAWSLLDNFEWGEGYG 482
>2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN
GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete
chrysosporium} PDB: 2e40_A*
Length = 465
Score = 542 bits (1400), Expect = 0.0
Identities = 159/410 (38%), Positives = 235/410 (57%), Gaps = 31/410 (7%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
M+ + P F+WG +TAA+Q+EG+ ++DG+ +IWD P + D + DVA DSY+
Sbjct: 4 MSAAKLPKSFVWGYATAAYQIEGSPDKDGREPSIWDTFCKA-PGKIADGSSGDVATDSYN 62
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGD-TDRINEKGVQYYRNLINEVLSKNIQPMV 151
+++EDV L++ G + YRFSLSWSRI+P G +D +N G+++YR LI E++ + I P V
Sbjct: 63 RWREDVQLLKSYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFV 122
Query: 152 TLNHYDLPQPLQ-EFGGWANPVVA-DYFESFADVAFKTFGDKVPYWITINEPLDV-MGGY 208
TL H+DLPQ L +GGW N A F ++A + F++FGD V WIT NEP + + GY
Sbjct: 123 TLYHWDLPQALDDRYGGWLNKEEAIQDFTNYAKLCFESFGDLVQNWITFNEPWVISVMGY 182
Query: 209 GYKSGAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHN 268
G AP ++V+H+++ AHA A +LY ++K Q G++ ITLDS P++
Sbjct: 183 GNGIFAP--GHVSNTEPWIVSHHIILAHAHAVKLYRDEFKEKQGGQIGITLDSHWLIPYD 240
Query: 269 ATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEE 328
+ +EA R +F LG FA+PIY G+YPP +++I+ RLP FT E
Sbjct: 241 -DTDASKEATLRAMEFKLGRFANPIYK--GEYPPRIKKIL----------GDRLPEFTPE 287
Query: 329 EIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVV 388
EI+ +KGS DFF LN YT+ L+ + S+ + S+ WL+
Sbjct: 288 EIELVKGSSDFFGLNTYTTHLVQDGG--SDELAGFVKTGHTRADGTQLGTQSDMGWLQTY 345
Query: 389 PDGFRALLNWIKKEYNNPPVFITENGFSD--------DGRLDDEGRIDYY 430
GFR LLN++ K Y+ PV++TENGF + +DD R YY
Sbjct: 346 GPGFRWLLNYLWKAYDK-PVYVTENGFPVKGENDLPVEQAVDDTDRQAYY 394
Score = 290 bits (744), Expect = 2e-88
Identities = 92/280 (32%), Positives = 144/280 (51%), Gaps = 63/280 (22%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+ +IWD P + D +GDVA DSY++++EDV ++K G + YRFSLSWSRI+P
Sbjct: 32 GREPSIWDTFCKA-PGKIADGSSGDVATDSYNRWREDVQLLKSYGVKAYRFSLSWSRIIP 90
Query: 747 TGDI-DKINEKGVQYYRNLIDELLLNNIQPM----------------------------- 776
G D +N G+++YR LI+EL+ I P
Sbjct: 91 KGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHWDLPQALDDRYGGWLNKEEAIQDF 150
Query: 777 --------------VKLWITIKETLE-AMQGYDFKTYAP-YLSMTGVGGEYLAAHNLLRS 820
V+ WIT E ++ GY +AP ++S T ++ +H+++ +
Sbjct: 151 TNYAKLCFESFGDLVQNWITFNEPWVISVMGYGNGIFAPGHVSNTEP---WIVSHHIILA 207
Query: 821 HAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYS 880
HA A +LY ++K Q G++ +TL++H+ P D + +EA R ++FK G FA+PIY
Sbjct: 208 HAHAVKLYRDEFKEKQGGQIGITLDSHWLIPYDD-TDASKEATLRAMEFKLGRFANPIYK 266
Query: 881 QAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 920
G+YPP +++I+ RLP FT EEI+ +KG
Sbjct: 267 --GEYPPRIKKIL----------GDRLPEFTPEEIELVKG 294
Score = 156 bits (398), Expect = 4e-41
Identities = 45/89 (50%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 432 FQVYRFSLSWSRILPTGDI-DKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
+ YRFSLSWSRI+P G D +N G+++YR LI+EL+ I P VTLYHWDLPQ L D
Sbjct: 76 VKAYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHWDLPQALDD 135
Query: 491 -FGGWTN-AIIADYFETYADFAYKTFGDK 517
+GGW N F YA +++FGD
Sbjct: 136 RYGGWLNKEEAIQDFTNYAKLCFESFGDL 164
Score = 118 bits (299), Expect = 2e-28
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 564 SSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRA 623
S D+FGLN YT+ LV + F + + + WL+ GFR
Sbjct: 293 KGSSDFFGLNTYTTHLV-QDGGSDELAGFVKTGHTRADGTQLGTQSDMGWLQTYGPGFRW 351
Query: 624 LLNWIKKEYNNPPVFITENGFSD--------DGQLDDQGRVDFYQG 661
LLN++ K Y+ PV++TENGF + +DD R +Y+
Sbjct: 352 LLNYLWKAYDK-PVYVTENGFPVKGENDLPVEQAVDDTDRQAYYRD 396
Score = 90.6 bits (226), Expect = 4e-19
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+ Y A+ +A+ D ++ GY WS+LDNFEW +GY RFG+ HVD+ +
Sbjct: 395 RDYTEALLQAVTEDGADVRGYFGWSLLDNFEWAEGYKVRFGVTHVDYET 443
Score = 72.9 bits (180), Expect = 2e-13
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
Y AL +A+ ED +V GY WSLLDNFEW GY
Sbjct: 395 RDYTEALLQAVTEDGADVRGYFGWSLLDNFEWAEGYK 431
>1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase,
glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A
{Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M*
1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M*
2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M*
1myr_A*
Length = 501
Score = 534 bits (1377), Expect = 0.0
Identities = 145/430 (33%), Positives = 226/430 (52%), Gaps = 48/430 (11%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLV-KDRQNADVACDSY 91
+N F F++G +++A+Q+EG G+G NIWD H P+ D N D CDS+
Sbjct: 20 LNSSSFSSDFIFGVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSF 76
Query: 92 HKYKEDVALIRDIGFQVYRFSLSWSRILPTGD-TDRINEKGVQYYRNLINEVLSKNIQPM 150
+++D+ ++ ++ YRFS++WSRI+P G + +NEKG+ YY LI+ ++ K I P
Sbjct: 77 SYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPF 136
Query: 151 VTLNHYDLPQPLQ-EFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGY 208
VTL H+DLPQ LQ E+ G+ +P + D F+ +AD+ F+ FGD V YW+TIN+ V GY
Sbjct: 137 VTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGY 196
Query: 209 GYKSGAP-----YLNLSGLGGD-----YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSIT 258
G AP ++ S G+ Y+VAH+ L AHAK LY K Y Q GK+ T
Sbjct: 197 GSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYTH-QGGKIGPT 255
Query: 259 LDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRA 318
+ + + P+N T + A ER+ +F LG F P+ + G YP I+ V
Sbjct: 256 MITRWFLPYNDTDRHSIAATERMKEFFLGWFMGPLTN--GTYPQIMIDTV---------- 303
Query: 319 RSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNHTSNAP-PSTINDRAATFS----- 372
RLP F+ EE +KGS+DF LN+Y + + + N+ + + D A +
Sbjct: 304 GERLPSFSPEESNLVKGSYDFLGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINAS 363
Query: 373 ------QDPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD------DGR 420
+ ++ + P G +++++ K +Y NP +++TENG S +
Sbjct: 364 GHYIGPLFEKDKADSTDNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQS 423
Query: 421 LDDEGRIDYY 430
+ D RIDY
Sbjct: 424 MLDYTRIDYL 433
Score = 290 bits (745), Expect = 3e-88
Identities = 85/290 (29%), Positives = 118/290 (40%), Gaps = 68/290 (23%)
Query: 687 GKGENIWDRLVHTNPAAVV-DKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRIL 745
G+G NIWD H P D NGD CDS+ +++D+ ++ +L YRFS++WSRI+
Sbjct: 45 GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRII 104
Query: 746 PTGDI-DKINEKGVQYYRNLIDELLLNNIQPM---------------------------- 776
P G +NEKG+ YY LI L+ I P
Sbjct: 105 PRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDF 164
Query: 777 --------------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVGGE----------Y 811
VK W+TI + +GY AP V Y
Sbjct: 165 KDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPY 224
Query: 812 LAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKF 871
+ AH+ L +HAK LY K Y Q GK+ T+ T + P + + + A ER +F
Sbjct: 225 IVAHHQLLAHAKVVDLYRKNYT-HQGGKIGPTMITRWFLPYNDTDRHSIAATERMKEFFL 283
Query: 872 GLFAHPIYSQAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
G F P+ + G YP I+ V RLP F+ EE +KG
Sbjct: 284 GWFMGPLTN--GTYPQIMIDTV----------GERLPSFSPEESNLVKGS 321
Score = 162 bits (413), Expect = 8e-43
Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 432 FQVYRFSLSWSRILPTGDI-DKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
YRFS++WSRI+P G +NEKG+ YY LI L+ I P VTL+HWDLPQ LQD
Sbjct: 91 ATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTLQD 150
Query: 491 -FGGWTNAIIADYFETYADFAYKTFGDK 517
+ G+ + I D F+ YAD ++ FGD
Sbjct: 151 EYEGFLDPQIIDDFKDYADLCFEEFGDS 178
Score = 118 bits (299), Expect = 4e-28
Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 19/115 (16%)
Query: 566 SFDYFGLNHYTSFLVSKKTEP--SPEPSFRNDANVVLSDDRK-----------WPKGASF 612
S+D+ GLN+Y + P S + DA L+ ++
Sbjct: 321 SYDFLGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKADSTD 380
Query: 613 WLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD------DGQLDDQGRVDFYQG 661
+ P G +++++ K +Y NP +++TENG S + + D R+D+
Sbjct: 381 NIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDYLCS 435
Score = 92.7 bits (231), Expect = 1e-19
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+L + K + N+ GY AW++ DN+E+ G+T RFG+ ++D+++
Sbjct: 434 CSHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNN 482
Score = 73.4 bits (181), Expect = 1e-13
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
+L L+K I E NV GY AW+L DN+E+ G+T
Sbjct: 434 CSHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNKGFT 470
>3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese
enhancement, hydro; 1.63A {Trichoderma reesei}
Length = 473
Score = 531 bits (1370), Expect = e-180
Identities = 153/412 (37%), Positives = 223/412 (54%), Gaps = 31/412 (7%)
Query: 34 NKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHK 93
+ H P F WG +TAA+Q+EGA ++DG+G +IWD P + D + ACDSY++
Sbjct: 5 HHHMLPKDFQWGFATAAYQIEGAVDQDGRGPSIWDTFCAQ-PGKIADGSSGVTACDSYNR 63
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGD-TDRINEKGVQYYRNLINEVLSKNIQPMVT 152
ED+AL++ +G + YRFS+SWSRI+P G D +N+ G+ +Y ++++L I P +T
Sbjct: 64 TAEDIALLKSLGAKSYRFSISWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFIT 123
Query: 153 LNHYDLPQPLQ-EFGGWAN-PVVADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYG 209
L H+DLP+ L +GG N FE++A V F+ KV WIT NEPL + GYG
Sbjct: 124 LFHWDLPEGLHQRYGGLLNRTEFPLDFENYARVMFRAL-PKVRNWITFNEPLCSAIPGYG 182
Query: 210 YKSGAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQ-KGKVSITLDSCNYYPHN 268
+ AP + + V HN+L AH +A + Y +K G++ I L+ YP +
Sbjct: 183 SGTFAPGRQST--SEPWTVGHNILVAHGRAVKAYRDDFKPASGDGQIGIVLNGDFTYPWD 240
Query: 269 ATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEE 328
A D+EAAER +F FA PIY GDYP +R+ + RLP FT E
Sbjct: 241 AADPADKEAAERRLEFFTAWFADPIYL--GDYPASMRKQL----------GDRLPTFTPE 288
Query: 329 EIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQD--PNWPSSNSPWLK 386
E + GS DF+ +NHYTS I + + ++A + N ++ P + SPWL+
Sbjct: 289 ERALVHGSNDFYGMNHYTSNYIRHRSSPASADDTVGNVDVLFTNKQGNCIGPETQSPWLR 348
Query: 387 VVPDGFRALLNWIKKEYNNPPVFITENGFSD--------DGRLDDEGRIDYY 430
GFR L WI K Y PP+++TENG S + L+D+ R+ YY
Sbjct: 349 PCAAGFRDFLVWISKRYGYPPIYVTENGTSIKGESDLPKEKILEDDFRVKYY 400
Score = 283 bits (727), Expect = 5e-86
Identities = 91/279 (32%), Positives = 130/279 (46%), Gaps = 60/279 (21%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+G +IWD P + D +G ACDSY++ ED+A++K LG + YRFS+SWSRI+P
Sbjct: 32 GRGPSIWDTFCAQ-PGKIADGSSGVTACDSYNRTAEDIALLKSLGAKSYRFSISWSRIIP 90
Query: 747 TGDI-DKINEKGVQYYRNLIDELLLNNIQPM----------------------------- 776
G D +N+ G+ +Y +D+LL I P
Sbjct: 91 EGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWDLPEGLHQRYGGLLNRTEFPLDF 150
Query: 777 -------------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHA 822
V+ WIT E L A+ GY T+AP + HN+L +H
Sbjct: 151 ENYARVMFRALPKVRNWITFNEPLCSAIPGYGSGTFAP--GRQSTSEPWTVGHNILVAHG 208
Query: 823 KAYRLYEKKYKPSQ-KGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQ 881
+A + Y +KP+ G++ + LN F YP D + D+EAAER ++F FA PIY
Sbjct: 209 RAVKAYRDDFKPASGDGQIGIVLNGDFTYPWDAADPADKEAAERRLEFFTAWFADPIYL- 267
Query: 882 AGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 920
GDYP +R+ + RLP FT EE + G
Sbjct: 268 -GDYPASMRKQL----------GDRLPTFTPEERALVHG 295
Score = 148 bits (376), Expect = 4e-38
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 432 FQVYRFSLSWSRILPTGDI-DKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD 490
+ YRFS+SWSRI+P G D +N+ G+ +Y +D+LL I P +TL+HWDLP+ L
Sbjct: 76 AKSYRFSISWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWDLPEGLHQ 135
Query: 491 -FGGWTN-AIIADYFETYADFAYKTFGDKKY 519
+GG N FE YA ++ +
Sbjct: 136 RYGGLLNRTEFPLDFENYARVMFRALPKVRN 166
Score = 123 bits (312), Expect = 6e-30
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 566 SFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRK---WPKGASFWLKVVPDGFR 622
S D++G+NHYTS + ++ P+ + +V+ ++ + P+ S WL+ GFR
Sbjct: 296 SNDFYGMNHYTSNYIRHRSSPASADDTVGNVDVLFTNKQGNCIGPETQSPWLRPCAAGFR 355
Query: 623 ALLNWIKKEYNNPPVFITENGFSD--------DGQLDDQGRVDFYQG 661
L WI K Y PP+++TENG S + L+D RV +Y
Sbjct: 356 DFLVWISKRYGYPPIYVTENGTSIKGESDLPKEKILEDDFRVKYYNE 402
Score = 90.4 bits (225), Expect = 5e-19
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+Y+ AM A+ D N+ GY AWS++DNFEW DGY RFG+ +VD+ +
Sbjct: 401 NEYIRAMVTAVELDGVNVKGYFAWSLMDNFEWADGYVTRFGVTYVDYEN 449
Score = 71.1 bits (175), Expect = 8e-13
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
N+Y+ A+ A+ D NV GY AWSL+DNFEW GY
Sbjct: 401 NEYIRAMVTAVELDGVNVKGYFAWSLMDNFEWADGYV 437
>1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus
circulans} SCOP: c.1.8.4
Length = 449
Score = 501 bits (1292), Expect = e-169
Identities = 145/405 (35%), Positives = 215/405 (53%), Gaps = 35/405 (8%)
Query: 34 NKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHK 93
+ H FP F WG +TAA+Q+EGA+NEDG+G +IWD HT P VK+ N +VACDSYH+
Sbjct: 1 SIHMFPSDFKWGVATAAYQIEGAYNEDGRGMSIWDTFAHT-PGKVKNGDNGNVACDSYHR 59
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTL 153
+EDV L++D+G +VYRFS+SW R+LP G T +N G+ YY L++E+L+ I+P TL
Sbjct: 60 VEEDVQLLKDLGVKVYRFSISWPRVLPQG-TGEVNRAGLDYYHRLVDELLANGIEPFCTL 118
Query: 154 NHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSG 213
H+DLPQ LQ+ GGW + + D F +A++ FK G K+ WIT NEP M G
Sbjct: 119 YHWDLPQALQDQGGWGSRITIDAFAEYAELMFKELGGKIKQWITFNEPW-CMAFLSNYLG 177
Query: 214 --APYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATS 271
AP L V+H+LL AH +A L+ + G++ I ++ P+ +
Sbjct: 178 VHAP--GNKDLQLAIDVSHHLLVAHGRAVTLFRELG---ISGEIGIAPNTSWAVPYR-RT 231
Query: 272 KEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIK 331
KED EA RV ++ + PIY G+YP + P + +++
Sbjct: 232 KEDMEACLRVNGWSGDWYLDPIYF--GEYPKFMLDWY--------ENLGYKPPIVDGDME 281
Query: 332 ALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDG 391
+ DF +N+YTS + N P ++ + P ++ W ++ +G
Sbjct: 282 LIHQPIDFIGINYYTSSMNRYN-------PGEAGGMLSSEAISMGAPKTDIGW-EIYAEG 333
Query: 392 FRALLNWIKKEYNNPPVFITENGFSD------DGRLDDEGRIDYY 430
LL + +Y NP ++ITENG DGR+ D+ RIDY
Sbjct: 334 LYDLLRYTADKYGNPTLYITENGACYNDGLSLDGRIHDQRRIDYL 378
Score = 257 bits (658), Expect = 2e-76
Identities = 79/277 (28%), Positives = 118/277 (42%), Gaps = 60/277 (21%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+G +IWD HT P V + NG+VACDSYH+ +EDV ++KDLG +VYRFS+SW R+LP
Sbjct: 28 GRGMSIWDTFAHT-PGKVKNGDNGNVACDSYHRVEEDVQLLKDLGVKVYRFSISWPRVLP 86
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
G ++N G+ YY L+DELL N I+P
Sbjct: 87 QGT-GEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQALQDQGGWGSRITIDAFAEY 145
Query: 777 -----------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHAKA 824
+K WIT E A +AP + +H+LL +H +A
Sbjct: 146 AELMFKELGGKIKQWITFNEPWCMAFLSNYLGVHAP--GNKDLQLAIDVSHHLLVAHGRA 203
Query: 825 YRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGD 884
L+ + G++ + NT + P +KED EA R + + PIY G+
Sbjct: 204 VTLFREL---GISGEIGIAPNTSWAVPYRR-TKEDMEACLRVNGWSGDWYLDPIYF--GE 257
Query: 885 YPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
YP + P + +++ +
Sbjct: 258 YPKFMLDWY--------ENLGYKPPIVDGDMELIHQP 286
Score = 161 bits (409), Expect = 1e-42
Identities = 46/86 (53%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDF 491
+VYRFS+SW R+LP G ++N G+ YY L+DELL N I+P TLYHWDLPQ LQD
Sbjct: 72 VKVYRFSISWPRVLPQGT-GEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQALQDQ 130
Query: 492 GGWTNAIIADYFETYADFAYKTFGDK 517
GGW + I D F YA+ +K G K
Sbjct: 131 GGWGSRITIDAFAEYAELMFKELGGK 156
Score = 107 bits (269), Expect = 2e-24
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 13/104 (12%)
Query: 564 SSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRA 623
D+ G+N+YTS + + + PK W ++ +G
Sbjct: 284 HQPIDFIGINYYTSSMNRYNPGEAGGMLSSE------AISMGAPKTDIGW-EIYAEGLYD 336
Query: 624 LLNWIKKEYNNPPVFITENGFSD------DGQLDDQGRVDFYQG 661
LL + +Y NP ++ITENG DG++ DQ R+D+
Sbjct: 337 LLRYTADKYGNPTLYITENGACYNDGLSLDGRIHDQRRIDYLAM 380
Score = 86.0 bits (214), Expect = 1e-17
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
+L +A + D N+ GY WS++DNFEW +GY RFG+VHVD+ +
Sbjct: 379 AMHLIQASRA-IEDGINLKGYMEWSLMDNFEWAEGYGMRFGLVHVDYDT 426
Score = 66.7 bits (164), Expect = 2e-11
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
+L S+AI ED N+ GY WSL+DNFEW GY
Sbjct: 379 AMHLIQASRAI-EDGINLKGYMEWSLMDNFEWAEGYG 414
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase,
polysaccharide degradation, transition state mimic,
carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga
maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A*
1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A*
2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A*
2j7f_A* 2j7g_A* 2j7h_A* ...
Length = 468
Score = 498 bits (1285), Expect = e-168
Identities = 152/406 (37%), Positives = 229/406 (56%), Gaps = 41/406 (10%)
Query: 34 NKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHK 93
N +FP GFLWG +TA++Q+EG+ DG G +IW HT P VK+ DVACD Y++
Sbjct: 24 NVKKFPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHT-PGNVKNGDTGDVACDHYNR 82
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTL 153
+KED+ +I +G + YRFS+SW RILP G T R+N+KG+ +Y +I+ +L K I P VT+
Sbjct: 83 WKEDIEIIEKLGVKAYRFSISWPRILPEG-TGRVNQKGLDFYNRIIDTLLEKGITPFVTI 141
Query: 154 NHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSG 213
H+DLP LQ GGWAN +AD+F ++ V F+ FGD+V WIT+NEP V+ G+ G
Sbjct: 142 YHWDLPFALQLKGGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPW-VVAIVGHLYG 200
Query: 214 --APYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATS 271
AP + + + HNLLRAHA+A +++ + + GK+ I ++ + P +
Sbjct: 201 VHAP--GMRDIYVAFRAVHNLLRAHARAVKVFRETV---KDGKIGIVFNNGYFEPAS-EK 254
Query: 272 KEDQEAAERVFQF-TLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEI 330
+ED A + QF LF +PIY GDYP +V + R LP ++++
Sbjct: 255 EEDIRAVRFMHQFNNYPLFLNPIYR--GDYPELVLEFA----------REYLPENYKDDM 302
Query: 331 KALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPD 390
++ DF LN+Y+ L+ + + A + + P + W ++VP+
Sbjct: 303 SEIQEKIDFVGLNYYSGHLVKFDP----------DAPAKVSFVERDLPKTAMGW-EIVPE 351
Query: 391 GFRALLNWIKKEYNNPPVFITENGFSD------DGRLDDEGRIDYY 430
G +L +K+EYN P V+ITENG + DGR+ D+ RIDY
Sbjct: 352 GIYWILKKVKEEYNPPEVYITENGAAFDDVVSEDGRVHDQNRIDYL 397
Score = 254 bits (651), Expect = 3e-75
Identities = 86/278 (30%), Positives = 129/278 (46%), Gaps = 63/278 (22%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G G +IW HT P V + GDVACD Y+++KED+ II+ LG + YRFS+SW RILP
Sbjct: 51 GAGMSIWHTFSHT-PGNVKNGDTGDVACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILP 109
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
G ++N+KG+ +Y +ID LL I P
Sbjct: 110 EGT-GRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFALQLKGGWANREIADWFAEY 168
Query: 777 -----------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHAKA 824
VK WIT+ E A+ G+ + +AP M + + A HNLLR+HA+A
Sbjct: 169 SRVLFENFGDRVKNWITLNEPWVVAIVGHLYGVHAP--GMRDIYVAFRAVHNLLRAHARA 226
Query: 825 YRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFK-FGLFAHPIYSQAG 883
+++ + + GK+ + N + P +ED A QF + LF +PIY G
Sbjct: 227 VKVFRETV---KDGKIGIVFNNGYFEPASE-KEEDIRAVRFMHQFNNYPLFLNPIYR--G 280
Query: 884 DYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
DYP +V + R LP ++++ ++ K
Sbjct: 281 DYPELVLEFA----------REYLPENYKDDMSEIQEK 308
Score = 161 bits (409), Expect = 1e-42
Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDF 491
+ YRFS+SW RILP G ++N+KG+ +Y +ID LL I P VT+YHWDLP LQ
Sbjct: 95 VKAYRFSISWPRILPEGT-GRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFALQLK 153
Query: 492 GGWTNAIIADYFETYADFAYKTFGDK 517
GGW N IAD+F Y+ ++ FGD+
Sbjct: 154 GGWANREIADWFAEYSRVLFENFGDR 179
Score = 109 bits (275), Expect = 3e-25
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 564 SSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRA 623
D+ GLN+Y+ LV + + SF +R PK A W ++VP+G
Sbjct: 306 QEKIDFVGLNYYSGHLVKFDPDAPAKVSFV---------ERDLPKTAMGW-EIVPEGIYW 355
Query: 624 LLNWIKKEYNNPPVFITENGFSD------DGQLDDQGRVDFYQG 661
+L +K+EYN P V+ITENG + DG++ DQ R+D+ +
Sbjct: 356 ILKKVKEEYNPPEVYITENGAAFDDVVSEDGRVHDQNRIDYLKA 399
Score = 86.0 bits (214), Expect = 1e-17
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
K ++ KA + + + GY WS+LDNFEW +GY+ RFGIV+VD+S+
Sbjct: 398 KAHIGQAWKA-IQEGVPLKGYFVWSLLDNFEWAEGYSKRFGIVYVDYST 445
Score = 66.8 bits (164), Expect = 2e-11
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++ KAI ++ + GY WSLLDNFEW GY+
Sbjct: 398 KAHIGQAWKAI-QEGVPLKGYFVWSLLDNFEWAEGYS 433
>3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese
enhancement, hydro; HET: 7PE; 1.90A {Clostridium
cellulovorans}
Length = 453
Score = 492 bits (1270), Expect = e-166
Identities = 151/406 (37%), Positives = 224/406 (55%), Gaps = 38/406 (9%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
M K +FP F++G +TAA+Q+EGA+ ED KGE+IWD H P V N D+ACD YH
Sbjct: 1 MEKLRFPKDFIFGTATAAYQIEGAYKEDEKGESIWDRFSHI-PGNVAKMHNGDIACDHYH 59
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
+YKEDV L++ +G + YRFS++W RI P G IN+KG+Q+YR+LI+E++ +I+P +T
Sbjct: 60 RYKEDVQLLKSLGIKSYRFSIAWPRIFPKG-FGEINQKGIQFYRDLIDELIKNDIEPAIT 118
Query: 153 LNHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKS 212
+ H+DLPQ LQ+ GGWANP VADY+ +A++ F+ FGD+V WIT NEP V GY
Sbjct: 119 IYHWDLPQKLQDIGGWANPQVADYYVDYANLLFREFGDRVKTWITHNEPW-VASYLGYAL 177
Query: 213 G--APYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNAT 270
G AP + + L AHN+L +H KA + Y + Q G++ ITL+ Y ++
Sbjct: 178 GVHAP--GIKDMKMALLAAHNILLSHFKAVKAYRELE---QDGQIGITLNLSTCYSNS-A 231
Query: 271 SKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEI 330
+ED AA R + F G YP + +I + +P +E
Sbjct: 232 DEEDIAAAHRSDGWNNRWFLDAALK--GTYPEDMIKIF--------SDTNIMPELPKELF 281
Query: 331 KALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPD 390
+ + DF +N+YT ++ NN+ S + P + W ++ P
Sbjct: 282 TEVFETSDFLGINYYTRQVVKNNSEAFIGAESV----------AMDNPKTEMGW-EIYPQ 330
Query: 391 GFRALLNWIKKEYNNPPVFITENGFSD------DGRLDDEGRIDYY 430
G LL I ++Y N ++ITENG + DG+++DE R+DY
Sbjct: 331 GLYDLLTRIHRDYGNIDLYITENGAAFNDMVNRDGKVEDENRLDYL 376
Score = 250 bits (640), Expect = 7e-74
Identities = 89/277 (32%), Positives = 123/277 (44%), Gaps = 60/277 (21%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
KGE+IWDR H P V NGD+ACD YH+YKEDV ++K LG + YRFS++W RI P
Sbjct: 29 EKGESIWDRFSHI-PGNVAKMHNGDIACDHYHRYKEDVQLLKSLGIKSYRFSIAWPRIFP 87
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
G +IN+KG+Q+YR+LIDEL+ N+I+P
Sbjct: 88 KGF-GEINQKGIQFYRDLIDELIKNDIEPAITIYHWDLPQKLQDIGGWANPQVADYYVDY 146
Query: 777 -----------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHAKA 824
VK WIT E + GY +AP + + LAAHN+L SH KA
Sbjct: 147 ANLLFREFGDRVKTWITHNEPWVASYLGYALGVHAP--GIKDMKMALLAAHNILLSHFKA 204
Query: 825 YRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGD 884
+ Y + Q G++ +TLN Y +ED AA R + F G
Sbjct: 205 VKAYREL---EQDGQIGITLNLSTCYSNSA-DEEDIAAAHRSDGWNNRWFLDAALK--GT 258
Query: 885 YPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
YP + +I + +P +E +
Sbjct: 259 YPEDMIKIF--------SDTNIMPELPKELFTEVFET 287
Score = 159 bits (405), Expect = 4e-42
Identities = 47/86 (54%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDF 491
+ YRFS++W RI P G +IN+KG+Q+YR+LIDEL+ N+I+P +T+YHWDLPQ LQD
Sbjct: 73 IKSYRFSIAWPRIFPKGF-GEINQKGIQFYRDLIDELIKNDIEPAITIYHWDLPQKLQDI 131
Query: 492 GGWTNAIIADYFETYADFAYKTFGDK 517
GGW N +ADY+ YA+ ++ FGD+
Sbjct: 132 GGWANPQVADYYVDYANLLFREFGDR 157
Score = 102 bits (257), Expect = 5e-23
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 564 SSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRA 623
+ D+ G+N+YT +V +E S PK W ++ P G
Sbjct: 285 FETSDFLGINYYTRQVVKNNSEAFIGAE---------SVAMDNPKTEMGW-EIYPQGLYD 334
Query: 624 LLNWIKKEYNNPPVFITENGFSD------DGQLDDQGRVDFYQG 661
LL I ++Y N ++ITENG + DG+++D+ R+D+
Sbjct: 335 LLTRIHRDYGNIDLYITENGAAFNDMVNRDGKVEDENRLDYLYT 378
Score = 84.1 bits (209), Expect = 5e-17
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDF 563
+ A A + + GY WS +DNFEW +GY RFGIVHV++
Sbjct: 377 YTHFAAALSA-IEAGVPLKGYYIWSFMDNFEWAEGYEKRFGIVHVNY 422
Score = 64.8 bits (159), Expect = 6e-11
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
+ A AI E + GY WS +DNFEW GY
Sbjct: 377 YTHFAAALSAI-EAGVPLKGYYIWSFMDNFEWAEGYE 412
>1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of
glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP}
SCOP: c.1.8.4 PDB: 1gon_A
Length = 479
Score = 492 bits (1270), Expect = e-165
Identities = 129/414 (31%), Positives = 194/414 (46%), Gaps = 37/414 (8%)
Query: 34 NKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHK 93
FP GFLWG +TA++Q+EGA EDG+ +IWD T P V++ DVA D YH+
Sbjct: 14 AALTFPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYART-PGRVRNGDTGDVATDHYHR 72
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTL 153
++EDVAL+ ++G YRFSL+W RI PTG +KG+ +YR L +E+L+K IQP+ TL
Sbjct: 73 WREDVALMAELGLGAYRFSLAWPRIQPTG-RGPALQKGLDFYRRLADELLAKGIQPVATL 131
Query: 154 NHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSG 213
H+DLPQ L+ GGW A+ F +A +A GD+V W T+NEP GY SG
Sbjct: 132 YHWDLPQELENAGGWPERATAERFAEYAAIAADALGDRVKTWTTLNEPW-CSAFLGYGSG 190
Query: 214 --APYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATS 271
AP + AH+L H A + + + S+TL+ + P S
Sbjct: 191 VHAP--GRTDPVAALRAAHHLNLGHGLAVQALRDRLP--ADAQCSVTLNIHHVRPLT-DS 245
Query: 272 KEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFT-EEEI 330
D +A R+ +F P+ G YP + + A F + ++
Sbjct: 246 DADADAVRRIDALANRVFTGPMLQ--GAYPEDLVKDT---------AGLTDWSFVRDGDL 294
Query: 331 KALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAAT--------FSQDPNWPSSNS 382
+ DF +N+Y+ L++ + + A + P ++
Sbjct: 295 RLAHQKLDFLGVNYYSPTLVSEADGSGTHNSDGHGRSAHSPWPGADRVAFHQPPGETTAM 354
Query: 383 PWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD------DGRLDDEGRIDYY 430
W V P G LL + ++ P+ ITENG + +G ++D RI Y
Sbjct: 355 GWA-VDPSGLYELLRRLSSDFPALPLVITENGAAFHDYADPEGNVNDPERIAYV 407
Score = 247 bits (634), Expect = 9e-73
Identities = 78/274 (28%), Positives = 106/274 (38%), Gaps = 60/274 (21%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+ +IWD T P V + GDVA D YH+++EDVA++ +LG YRFSL+W RI P
Sbjct: 41 GRTPSIWDTYART-PGRVRNGDTGDVATDHYHRWREDVALMAELGLGAYRFSLAWPRIQP 99
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
TG +KG+ +YR L DELL IQP+
Sbjct: 100 TGR-GPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQELENAGGWPERATAERFAEY 158
Query: 777 -----------VKLWITIKETL-EAMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHAKA 824
VK W T+ E A GY +AP T AAH+L H A
Sbjct: 159 AAIAADALGDRVKTWTTLNEPWCSAFLGYGSGVHAP--GRTDPVAALRAAHHLNLGHGLA 216
Query: 825 YRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGD 884
+ + + ++TLN H PL S D +A R +F P+ G
Sbjct: 217 VQALRDRLP--ADAQCSVTLNIHHVRPLTD-SDADADAVRRIDALANRVFTGPMLQ--GA 271
Query: 885 YPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKAL 918
YP + + A F + L
Sbjct: 272 YPEDLVKDT---------AGLTDWSFVRDGDLRL 296
Score = 160 bits (407), Expect = 4e-42
Identities = 43/86 (50%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDF 491
YRFSL+W RI PTG +KG+ +YR L DELL IQP+ TLYHWDLPQ L++
Sbjct: 85 LGAYRFSLAWPRIQPTGR-GPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQELENA 143
Query: 492 GGWTNAIIADYFETYADFAYKTFGDK 517
GGW A+ F YA A GD+
Sbjct: 144 GGWPERATAERFAEYAAIAADALGDR 169
Score = 107 bits (269), Expect = 2e-24
Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 564 SSSFDYFGLNHYTSFLVSKKTEPSPEPSFRND---------ANVVLSDDRKWPKGASFWL 614
D+ G+N+Y+ LVS+ S + A+ V A W
Sbjct: 298 HQKLDFLGVNYYSPTLVSEADGSGTHNSDGHGRSAHSPWPGADRVAFHQPPGETTAMGWA 357
Query: 615 KVVPDGFRALLNWIKKEYNNPPVFITENGFSD------DGQLDDQGRVDFYQG 661
V P G LL + ++ P+ ITENG + +G ++D R+ + +
Sbjct: 358 -VDPSGLYELLRRLSSDFPALPLVITENGAAFHDYADPEGNVNDPERIAYVRD 409
Score = 84.9 bits (211), Expect = 3e-17
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDF 563
+ +L A+ +A + D ++ GY WS+LDNFEW GY+ RFG V+VD+
Sbjct: 408 RDHLAAVHRA-IKDGSDVRGYFLWSLLDNFEWAHGYSKRFGAVYVDY 453
Score = 65.6 bits (161), Expect = 4e-11
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
+L A+ +AI +D +V GY WSLLDNFEW GY+
Sbjct: 408 RDHLAAVHRAI-KDGSDVRGYFLWSLLDNFEWAHGYS 443
>3fj0_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase; HET: BGC; 1.15A
{Uncultured bacterium} PDB: 3cmj_A 3fiz_A* 3fiy_A*
Length = 465
Score = 485 bits (1251), Expect = e-163
Identities = 130/409 (31%), Positives = 205/409 (50%), Gaps = 40/409 (9%)
Query: 30 GTQMNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACD 89
G+ MN +FP GFLWG +T+++Q+EGAWNEDGKGE+IWD P +K+ + DVACD
Sbjct: 18 GSHMNVKKFPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRI-PGKIKNGDSGDVACD 76
Query: 90 SYHKYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQP 149
YH+Y++D+ L+R +G + YRFS++W+RI P + +IN++G+ +YR L+ + ++I P
Sbjct: 77 HYHRYEQDLDLMRQLGLKTYRFSIAWARIQPDS-SRQINQRGLDFYRRLVEGLHKRDILP 135
Query: 150 MVTLNHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYG 209
M TL H+DLPQ +++ GGW + A F + GD++P W+T NEP+ V G
Sbjct: 136 MATLYHWDLPQWVEDEGGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPM-VTVWAG 194
Query: 210 YKSG--APYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPH 267
Y G AP L VAH+LL +H +A + + ++ ITL+ YP
Sbjct: 195 YHMGLFAP--GLKDPTLGGRVAHHLLLSHGQALQAFRALSP--AGSQMGITLNFNTIYPV 250
Query: 268 NATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTE 327
+ D EAA R+ F LF P+ G Y
Sbjct: 251 S-AEPADVEAARRMHSFQNELFLEPLIR--GQYNQATLMAYPN----------LPEFIAP 297
Query: 328 EEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKV 387
E+++ + DF +N+Y + + ++ P + W ++
Sbjct: 298 EDMQTISAPIDFLGVNYYNPMRVKSSPQPPGIEVV-----------QVESPVTAMGW-EI 345
Query: 388 VPDGFRALLNWIKKEYNNPPVFITENGFSD------DGRLDDEGRIDYY 430
P+G LL I + Y P++ITENG + G+++D R+ Y+
Sbjct: 346 APEGLYDLLMGITRTYGKLPIYITENGAAFDDQPDQSGQVNDPQRVGYF 394
Score = 242 bits (619), Expect = 7e-71
Identities = 71/277 (25%), Positives = 114/277 (41%), Gaps = 61/277 (22%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKGE+IWDR P + + +GDVACD YH+Y++D+ +++ LG + YRFS++W+RI P
Sbjct: 49 GKGESIWDRFTRI-PGKIKNGDSGDVACDHYHRYEQDLDLMRQLGLKTYRFSIAWARIQP 107
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
+IN++G+ +YR L++ L +I PM
Sbjct: 108 DSS-RQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQWVEDEGGWLSRESASRFAEY 166
Query: 777 -----------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHAKA 824
+ LW+T E + GY +AP + AH+LL SH +A
Sbjct: 167 THALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFAP--GLKDPTLGGRVAHHLLLSHGQA 224
Query: 825 YRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGD 884
+ + ++ +TLN + YP+ D EAA R F+ LF P+ G
Sbjct: 225 LQAFRALSP--AGSQMGITLNFNTIYPVSA-EPADVEAARRMHSFQNELFLEPLIR--GQ 279
Query: 885 YPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
Y E+++ +
Sbjct: 280 YNQATLMAYPN----------LPEFIAPEDMQTISAP 306
Score = 158 bits (401), Expect = 2e-41
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDF 491
+ YRFS++W+RI P +IN++G+ +YR L++ L +I PM TLYHWDLPQ ++D
Sbjct: 93 LKTYRFSIAWARIQPDSS-RQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQWVEDE 151
Query: 492 GGWTNAIIADYFETYADFAYKTFGDK 517
GGW + A F Y GD+
Sbjct: 152 GGWLSRESASRFAEYTHALVAALGDQ 177
Score = 101 bits (254), Expect = 1e-22
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 564 SSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRA 623
S+ D+ G+N+Y V SP+P V + P A W ++ P+G
Sbjct: 304 SAPIDFLGVNYYNPMRVK----SSPQPPGIEVVQV------ESPVTAMGW-EIAPEGLYD 352
Query: 624 LLNWIKKEYNNPPVFITENGFSD------DGQLDDQGRVDFYQG 661
LL I + Y P++ITENG + GQ++D RV ++QG
Sbjct: 353 LLMGITRTYGKLPIYITENGAAFDDQPDQSGQVNDPQRVGYFQG 396
Score = 84.5 bits (210), Expect = 4e-17
Identities = 23/47 (48%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDF 563
+ ++ A ++A + D ++ GY AWS+LDNFEW +GY+ RFGI++VDF
Sbjct: 395 QGHIGAARRA-LADGVDLRGYYAWSLLDNFEWAEGYSKRFGIIYVDF 440
Score = 64.8 bits (159), Expect = 6e-11
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++ A +A+ D ++ GY AWSLLDNFEW GY+
Sbjct: 395 QGHIGAARRAL-ADGVDLRGYYAWSLLDNFEWAEGYS 430
>1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent
enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F
NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A
1bgg_A* 1bga_A 1uyq_A*
Length = 447
Score = 483 bits (1247), Expect = e-162
Identities = 129/401 (32%), Positives = 199/401 (49%), Gaps = 37/401 (9%)
Query: 37 QFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKE 96
QFP F+WG +TAA+Q+EGA+ EDG+G +IWD HT P V + N +VACDSYH+Y+E
Sbjct: 4 QFPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHT-PGKVFNGDNGNVACDSYHRYEE 62
Query: 97 DVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHY 156
D+ L++++G + YRFS+SW RI P G +N+KG+ YY +++ + I+P TL H+
Sbjct: 63 DIRLMKELGIRTYRFSVSWPRIFPNG-DGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHW 121
Query: 157 DLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSG--A 214
DLPQ LQ+ GGW N F FA+ F+ F K+ +W+T NEP + G A
Sbjct: 122 DLPQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPW-CIAFLSNMLGVHA 180
Query: 215 PYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKED 274
P L+ L V H+LL AH + R + + G++ I + P++ TS+ED
Sbjct: 181 P--GLTNLQTAIDVGHHLLVAHGLSVRRFRELG---TSGQIGIAPNVSWAVPYS-TSEED 234
Query: 275 QEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALK 334
+ A R F PIY G YP + + + ++ +
Sbjct: 235 KAACARTISLHSDWFLQPIYQ--GSYPQFLVDWF--------AEQGATVPIQDGDMDIIG 284
Query: 335 GSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRA 394
D +N+Y+ + N IN P ++ W V G
Sbjct: 285 EPIDMIGINYYSMSVNRFNPEAGFLQSEEIN---------MGLPVTDIGWP-VESRGLYE 334
Query: 395 LLNWIKKEYNNPPVFITENGFSD-----DGRLDDEGRIDYY 430
+L+++ ++Y N ++ITENG +G++ D+ RI Y
Sbjct: 335 VLHYL-QKYGNIDIYITENGACINDEVVNGKVQDDRRISYM 374
Score = 248 bits (635), Expect = 3e-73
Identities = 73/277 (26%), Positives = 115/277 (41%), Gaps = 60/277 (21%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+G +IWD HT P V + NG+VACDSYH+Y+ED+ ++K+LG + YRFS+SW RI P
Sbjct: 28 GRGLSIWDTFAHT-PGKVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFP 86
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
GD ++N+KG+ YY ++D L N I+P
Sbjct: 87 NGD-GEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQALQDAGGWGNRRTIQAFVQF 145
Query: 777 -----------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHAKA 824
++ W+T E A +AP +T + H+LL +H +
Sbjct: 146 AETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAP--GLTNLQTAIDVGHHLLVAHGLS 203
Query: 825 YRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGD 884
R + + G++ + N + P S+ED+ A R I F PIY G
Sbjct: 204 VRRFREL---GTSGQIGIAPNVSWAVPYST-SEEDKAACARTISLHSDWFLQPIYQ--GS 257
Query: 885 YPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
YP + + + ++ +
Sbjct: 258 YPQFLVDWF--------AEQGATVPIQDGDMDIIGEP 286
Score = 159 bits (406), Expect = 3e-42
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDF 491
+ YRFS+SW RI P GD ++N+KG+ YY ++D L N I+P TLYHWDLPQ LQD
Sbjct: 72 IRTYRFSVSWPRIFPNGD-GEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQALQDA 130
Query: 492 GGWTNAIIADYFETYADFAYKTFGDK 517
GGW N F +A+ ++ F K
Sbjct: 131 GGWGNRRTIQAFVQFAETMFREFHGK 156
Score = 98.7 bits (247), Expect = 7e-22
Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 15/103 (14%)
Query: 564 SSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRA 623
D G+N+Y+ + +PE F + + P W V G
Sbjct: 284 GEPIDMIGINYYSMSVNR----FNPEAGFLQSEEI----NMGLPVTDIGWP-VESRGLYE 334
Query: 624 LLNWIKKEYNNPPVFITENGFSD-----DGQLDDQGRVDFYQG 661
+L++++ +Y N ++ITENG +G++ D R+ + Q
Sbjct: 335 VLHYLQ-KYGNIDIYITENGACINDEVVNGKVQDDRRISYMQQ 376
Score = 84.9 bits (211), Expect = 2e-17
Identities = 22/47 (46%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDF 563
+++L + + ++D ++ GY AWS+LDNFEW +GY RFG++HVDF
Sbjct: 375 QQHLVQVHRT-IHDGLHVKGYMAWSLLDNFEWAEGYNMRFGMIHVDF 420
Score = 65.2 bits (160), Expect = 5e-11
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++L + + I D +V GY AWSLLDNFEW GY
Sbjct: 375 QQHLVQVHRTI-HDGLHVKGYMAWSLLDNFEWAEGYN 410
>2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A
{Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A*
2o9r_A*
Length = 454
Score = 484 bits (1248), Expect = e-162
Identities = 127/405 (31%), Positives = 207/405 (51%), Gaps = 37/405 (9%)
Query: 34 NKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHK 93
N FP F+WG ST+++Q+EG +E G+ +IWD P V DVACD +H
Sbjct: 10 NTFIFPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQI-PGKVIGGDCGDVACDHFHH 68
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTL 153
+KEDV L++ +GF YRFS++W RI+P INE+G+ +Y +L++E+ + PM+TL
Sbjct: 69 FKEDVQLMKQLGFLHYRFSVAWPRIMPAAG--IINEEGLLFYEHLLDEIELAGLIPMLTL 126
Query: 154 NHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSG 213
H+DLPQ +++ GGW +F+++A V FG+++ +W TINEP GY +G
Sbjct: 127 YHWDLPQWIEDEGGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPY-CASILGYGTG 185
Query: 214 --APYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATS 271
AP + AH++L H A L+++K GK+ ITL+ + +
Sbjct: 186 EHAP--GHENWREAFTAAHHILMCHGIASNLHKEKG---LTGKIGITLNMEHVDAAS-ER 239
Query: 272 KEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIK 331
ED AA R F FA P+++ G YP + + G + L +++
Sbjct: 240 PEDVAAAIRRDGFINRWFAEPLFN--GKYPEDMVEWY-------GTYLNGLDFVQPGDME 290
Query: 332 ALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDG 391
++ DF +N+YT +I + N S ++ P ++ W ++ P+
Sbjct: 291 LIQQPGDFLGINYYTRSIIRSTNDASLLQVEQVH---------MEEPVTDMGW-EIHPES 340
Query: 392 FRALLNWIKKEYNNP-PVFITENGFSD-----DGRLDDEGRIDYY 430
F LL I+K+++ P+ ITENG + +G+++D GR Y
Sbjct: 341 FYKLLTRIEKDFSKGLPILITENGAAMRDELVNGQIEDTGRQRYI 385
Score = 246 bits (630), Expect = 2e-72
Identities = 75/277 (27%), Positives = 115/277 (41%), Gaps = 60/277 (21%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+ +IWD P V+ GDVACD +H +KEDV ++K LGF YRFS++W RI+P
Sbjct: 37 GRTPSIWDTFCQI-PGKVIGGDCGDVACDHFHHFKEDVQLMKQLGFLHYRFSVAWPRIMP 95
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
INE+G+ +Y +L+DE+ L + PM
Sbjct: 96 AA--GIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQWIEDEGGWTQRETIQHFKTY 153
Query: 777 -----------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHAKA 824
+ W TI E ++ GY +AP + AAH++L H A
Sbjct: 154 ASVIMDRFGERINWWNTINEPYCASILGYGTGEHAP--GHENWREAFTAAHHILMCHGIA 211
Query: 825 YRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGD 884
L+++K GK+ +TLN ED AA R F FA P+++ G
Sbjct: 212 SNLHKEKG---LTGKIGITLNMEHVDAASE-RPEDVAAAIRRDGFINRWFAEPLFN--GK 265
Query: 885 YPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
YP + + G + L +++ ++
Sbjct: 266 YPEDMVEWY-------GTYLNGLDFVQPGDMELIQQP 295
Score = 156 bits (398), Expect = 3e-41
Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDF 491
F YRFS++W RI+P INE+G+ +Y +L+DE+ L + PM+TLYHWDLPQ ++D
Sbjct: 81 FLHYRFSVAWPRIMPAAG--IINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQWIEDE 138
Query: 492 GGWTNAIIADYFETYADFAYKTFGDK 517
GGWT +F+TYA FG++
Sbjct: 139 GGWTQRETIQHFKTYASVIMDRFGER 164
Score = 98.7 bits (247), Expect = 8e-22
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 564 SSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRA 623
D+ G+N+YT ++ + S V + P W ++ P+ F
Sbjct: 293 QQPGDFLGINYYTRSIIRSTNDASLLQ--------VEQVHMEEPVTDMGW-EIHPESFYK 343
Query: 624 LLNWIKKEYNNP-PVFITENGFSD-----DGQLDDQGRVDFYQG 661
LL I+K+++ P+ ITENG + +GQ++D GR + +
Sbjct: 344 LLTRIEKDFSKGLPILITENGAAMRDELVNGQIEDTGRQRYIEE 387
Score = 84.9 bits (211), Expect = 3e-17
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDF 563
+++L A + + + + GY WS LDNFEW GY+ RFGIVH+++
Sbjct: 386 EEHLKACHRF-IEEGGQLKGYFVWSFLDNFEWAWGYSKRFGIVHINY 431
Score = 65.2 bits (160), Expect = 4e-11
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++L A + I E+ + GY WS LDNFEW GY+
Sbjct: 386 EEHLKACHRFI-EEGGQLKGYFVWSFLDNFEWAWGYS 421
>3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A
{Halothermothrix orenii}
Length = 458
Score = 483 bits (1245), Expect = e-162
Identities = 140/410 (34%), Positives = 219/410 (53%), Gaps = 40/410 (9%)
Query: 31 TQMNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDS 90
M K FP F+WG +T+++Q+EGA+NEDGKGE+IWD HT P +++ D+ACD
Sbjct: 6 HHMAKIIFPEDFIWGAATSSYQIEGAFNEDGKGESIWDRFSHT-PGKIENGDTGDIACDH 64
Query: 91 YHKYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPM 150
YH Y+ED+ L+++IG + YRFS SW RILP G R+N+KG+ +Y+ L++ +L NI+PM
Sbjct: 65 YHLYREDIELMKEIGIRSYRFSTSWPRILPEG-KGRVNQKGLDFYKRLVDNLLKANIRPM 123
Query: 151 VTLNHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGY 210
+TL H+DLPQ LQ+ GGW N A YF +A + F+ F V W+T NEP V+ G+
Sbjct: 124 ITLYHWDLPQALQDKGGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEPW-VVAFEGH 182
Query: 211 KSG--APYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHN 268
G AP VAH+LL +H A ++ ++ G++ ITL+ YP
Sbjct: 183 AFGNHAP--GTKDFKTALQVAHHLLLSHGMAVDIFREED---LPGEIGITLNLTPAYPAG 237
Query: 269 ATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFT-- 326
S++D +AA + + F P++ G YP + I L FT
Sbjct: 238 -DSEKDVKAASLLDDYINAWFLSPVFK--GSYPEELHHIY----------EQNLGAFTTQ 284
Query: 327 EEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLK 386
++ + DF +N+Y+ +++ + + + + PS+ W +
Sbjct: 285 PGDMDIISRDIDFLGINYYSRMVVRHKPGDNLFNAEVVK--------MEDRPSTEMGW-E 335
Query: 387 VVPDGFRALLNWIKKEYNNPPVFITENGFSD------DGRLDDEGRIDYY 430
+ P G +L + KEY + P++ITENG + +G++ DE RI+Y
Sbjct: 336 IYPQGLYDILVRVNKEYTDKPLYITENGAAFDDKLTEEGKIHDEKRINYL 385
Score = 239 bits (613), Expect = 5e-70
Identities = 82/279 (29%), Positives = 123/279 (44%), Gaps = 64/279 (22%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKGE+IWDR HT P + + GD+ACD YH Y+ED+ ++K++G + YRFS SW RILP
Sbjct: 36 GKGESIWDRFSHT-PGKIENGDTGDIACDHYHLYREDIELMKEIGIRSYRFSTSWPRILP 94
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
G ++N+KG+ +Y+ L+D LL NI+PM
Sbjct: 95 EGK-GRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLPQALQDKGGWTNRDTAKYFAEY 153
Query: 777 -----------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHAKA 824
V LW+T E A +G+ F +AP AH+LL SH A
Sbjct: 154 ARLMFEEFNGLVDLWVTHNEPWVVAFEGHAFGNHAP--GTKDFKTALQVAHHLLLSHGMA 211
Query: 825 YRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGD 884
++ ++ G++ +TLN YP S++D +AA + F P++ G
Sbjct: 212 VDIFREE---DLPGEIGITLNLTPAYPAGD-SEKDVKAASLLDDYINAWFLSPVFK--GS 265
Query: 885 YPPIVRQIVDQNSAKEGRARSRLPRFT--EEEIKALKGK 921
YP + I L FT ++ +
Sbjct: 266 YPEELHHIY----------EQNLGAFTTQPGDMDIISRD 294
Score = 158 bits (402), Expect = 1e-41
Identities = 46/86 (53%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDF 491
+ YRFS SW RILP G ++N+KG+ +Y+ L+D LL NI+PM+TLYHWDLPQ LQD
Sbjct: 80 IRSYRFSTSWPRILPEGK-GRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLPQALQDK 138
Query: 492 GGWTNAIIADYFETYADFAYKTFGDK 517
GGWTN A YF YA ++ F
Sbjct: 139 GGWTNRDTAKYFAEYARLMFEEFNGL 164
Score = 102 bits (256), Expect = 7e-23
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 14/104 (13%)
Query: 564 SSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRA 623
S D+ G+N+Y+ +V K + + P W ++ P G
Sbjct: 292 SRDIDFLGINYYSRMVVRHKPGDNLFNAEVVK-------MEDRPSTEMGW-EIYPQGLYD 343
Query: 624 LLNWIKKEYNNPPVFITENGFSD------DGQLDDQGRVDFYQG 661
+L + KEY + P++ITENG + +G++ D+ R+++
Sbjct: 344 ILVRVNKEYTDKPLYITENGAAFDDKLTEEGKIHDEKRINYLGD 387
Score = 84.1 bits (209), Expect = 5e-17
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDF 563
+ KA + D + GY WS++DNFEW GY+ RFG+++VD+
Sbjct: 386 GDHFKQAYKA-LKDGVPLRGYYVWSLMDNFEWAYGYSKRFGLIYVDY 431
Score = 64.5 bits (158), Expect = 8e-11
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
+ KA+ +D + GY WSL+DNFEW GY+
Sbjct: 386 GDHFKQAYKAL-KDGVPLRGYYVWSLMDNFEWAYGYS 421
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural
genomics/PR initiative, RSGI, structural genomics,
hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4
PDB: 1np2_A
Length = 431
Score = 458 bits (1181), Expect = e-153
Identities = 120/402 (29%), Positives = 189/402 (47%), Gaps = 50/402 (12%)
Query: 37 QFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKYKE 96
+ FLWG +T+A+Q+EGA EDG+G +IWD P ++D + ACD Y +Y+E
Sbjct: 3 ENAEKFLWGVATSAYQIEGATQEDGRGPSIWDAFAQR-PGAIRDGSTGEPACDHYRRYEE 61
Query: 97 DVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLNHY 156
D+AL++ +G + YRFS++W RILP G RIN KG+ +Y L++ +L+ I P +TL H+
Sbjct: 62 DIALMQSLGVRAYRFSVAWPRILPEG-RGRINPKGLAFYDRLVDRLLASGITPFLTLYHW 120
Query: 157 DLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSG--A 214
DLP L+E GGW + A F +A+ + D+VP++ T+NEP G+ +G A
Sbjct: 121 DLPLALEERGGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPW-CSAFLGHWTGEHA 179
Query: 215 PYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKED 274
P L L AH+LL H A ++ +V I L+ Y ED
Sbjct: 180 P--GLRNLEAALRAAHHLLLGHGLAVEA----LRAAGARRVGIVLNFAPAYG------ED 227
Query: 275 QEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALK 334
EA + ++ F PI YP R +P +++ +
Sbjct: 228 PEAVDVADRYHNRFFLDPILG--KGYPESPF-----------RDPPPVP-ILSRDLELVA 273
Query: 335 GSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRA 394
DF +N+Y + +A T P P++ W +V P+G
Sbjct: 274 RPLDFLGVNYYAPVRVAPGTGTLPVRY-----------LPPEGPATAMGW-EVYPEGLYH 321
Query: 395 LLNWIKKEYNNPPVFITENGFSD------DGRLDDEGRIDYY 430
LL + +E P+++TENG + + ++D R+ Y
Sbjct: 322 LLKRLGREVPW-PLYVTENGAAYPDLWTGEAVVEDPERVAYL 362
Score = 225 bits (576), Expect = 3e-65
Identities = 69/277 (24%), Positives = 106/277 (38%), Gaps = 70/277 (25%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
G+G +IWD P A+ D G+ ACD Y +Y+ED+A+++ LG + YRFS++W RILP
Sbjct: 27 GRGPSIWDAFAQR-PGAIRDGSTGEPACDHYRRYEEDIALMQSLGVRAYRFSVAWPRILP 85
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
G +IN KG+ +Y L+D LL + I P
Sbjct: 86 EGR-GRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALEERGGWRSRETAFAFAEY 144
Query: 777 -----------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHAKA 824
V + T+ E A G+ +AP + + AAH+LL H A
Sbjct: 145 AEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAP--GLRNLEAALRAAHHLLLGHGLA 202
Query: 825 YRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGD 884
+ + +V + LN Y ED EA + ++ F PI
Sbjct: 203 VEA----LRAAGARRVGIVLNFAPAYG------EDPEAVDVADRYHNRFFLDPILG--KG 250
Query: 885 YPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
YP R +P +++ +
Sbjct: 251 YPESPF-----------RDPPPVP-ILSRDLELVARP 275
Score = 158 bits (401), Expect = 9e-42
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDF 491
+ YRFS++W RILP G +IN KG+ +Y L+D LL + I P +TLYHWDLP L++
Sbjct: 71 VRAYRFSVAWPRILPEGR-GRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALEER 129
Query: 492 GGWTNAIIADYFETYADFAYKTFGDK 517
GGW + A F YA+ + D+
Sbjct: 130 GGWRSRETAFAFAEYAEAVARALADR 155
Score = 94.8 bits (237), Expect = 1e-20
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 18/104 (17%)
Query: 564 SSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRA 623
+ D+ G+N+Y V+ T P + P A W +V P+G
Sbjct: 273 ARPLDFLGVNYYAPVRVAPGTGTLPVRYL----------PPEGPATAMGW-EVYPEGLYH 321
Query: 624 LLNWIKKEYNNPPVFITENGFSD------DGQLDDQGRVDFYQG 661
LL + +E P+++TENG + + ++D RV + +
Sbjct: 322 LLKRLGREVPW-PLYVTENGAAYPDLWTGEAVVEDPERVAYLEA 364
Score = 83.7 bits (208), Expect = 5e-17
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDF 563
+ ++ A +A + ++ GY WS++DNFEW GYT RFG+ +VDF
Sbjct: 363 EAHVEAALRA-REEGVDLRGYFVWSLMDNFEWAFGYTRRFGLYYVDF 408
Score = 64.0 bits (157), Expect = 1e-10
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++ A +A E+ ++ GY WSL+DNFEW GYT
Sbjct: 363 EAHVEAALRAR-EEGVDLRGYFVWSLMDNFEWAFGYT 398
>1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl
hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4
PDB: 3pbg_A 2pbg_A 4pbg_A*
Length = 468
Score = 452 bits (1165), Expect = e-150
Identities = 117/414 (28%), Positives = 185/414 (44%), Gaps = 32/414 (7%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYH 92
M K P F++G +TAA+Q EGA + DGKG WD + A+ A D YH
Sbjct: 1 MTK-TLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNY-----WYTAEPASDFYH 54
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVT 152
KY D+ L + G R S++WSRI PTG +NEKGV++Y L E ++++P VT
Sbjct: 55 KYPVDLELAEEYGVNGIRISIAWSRIFPTGY-GEVNEKGVEFYHKLFAECHKRHVEPFVT 113
Query: 153 LNHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPL-DVMGGYGYK 211
L+H+D P+ L G + N ++F +A F+ F + V YW T NE G Y
Sbjct: 114 LHHFDTPEALHSNGDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVG 172
Query: 212 SGAPYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATS 271
P + + HN++ +HA+A +LY+ K KG++ + YP++ +
Sbjct: 173 KFPPGIKYDLAKV-FQSHHNMMVSHARAVKLYKDKG---YKGEIGVVHALPTKYPYDPEN 228
Query: 272 KEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIK 331
D AAE Y G Y + V+ A+ G + +
Sbjct: 229 PADVRAAELEDIIHNKFILDATYL--GHYSDKTMEGVNHILAENGGELDLRD-EDFQALD 285
Query: 332 ALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQ---------DPNWPSSNS 382
A K DF +N+Y S + + + + ++ ++ Q P ++
Sbjct: 286 AAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDW 345
Query: 383 PWLKVVPDGFRALLNWIKKEYNN-PPVFITENGFSD-----DGRLDDEGRIDYY 430
W+ + P+G + +K +Y N ++ITENG D + D+GRIDY
Sbjct: 346 DWI-IYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNTVYDDGRIDYV 398
Score = 227 bits (580), Expect = 2e-65
Identities = 65/276 (23%), Positives = 99/276 (35%), Gaps = 54/276 (19%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
GKG WD+ + N + A D YHKY D+ + ++ G R S++WSRI P
Sbjct: 28 GKGPVAWDKYLEDNY-----WYTAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFP 82
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
TG ++NEKGV++Y L E +++P
Sbjct: 83 TGY-GEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSNGDFLNRENIEHFIDY 141
Query: 777 ----------VKLWITIKE-TLEAMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHAKAY 825
V W T E Y + P + + + HN++ SHA+A
Sbjct: 142 AAFCFEEFPEVNYWTTFNEIGPIGDGQYLVGKFPPGIKYDLAKV-FQSHHNMMVSHARAV 200
Query: 826 RLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGDY 885
+LY+ K KG++ + YP DP + D AAE Y G Y
Sbjct: 201 KLYKDKG---YKGEIGVVHALPTKYPYDPENPADVRAAELEDIIHNKFILDATYL--GHY 255
Query: 886 PPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK 921
+ V+ A+ G + + A K
Sbjct: 256 SDKTMEGVNHILAENGGELDLRD-EDFQALDAAKDL 290
Score = 152 bits (386), Expect = 2e-39
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDF 491
R S++WSRI PTG ++NEKGV++Y L E +++P VTL+H+D P+ L
Sbjct: 68 VNGIRISIAWSRIFPTGY-GEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSN 126
Query: 492 GGWTNAIIADYFETYADFAYKTFGDKKY 519
G + N ++F YA F ++ F + Y
Sbjct: 127 GDFLNRENIEHFIDYAAFCFEEFPEVNY 154
Score = 91.1 bits (227), Expect = 3e-19
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 17/112 (15%)
Query: 566 SFDYFGLNHYTSFLVSKKT-EPSPEPSFRNDANVVLSDDRKW---------PKGASFWLK 615
D+ G+N+Y S + E + + + + P+ W+
Sbjct: 290 LNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDWDWI- 348
Query: 616 VVPDGFRALLNWIKKEYNN-PPVFITENGFSD-----DGQLDDQGRVDFYQG 661
+ P+G + +K +Y N ++ITENG D + D GR+D+ +
Sbjct: 349 IYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNTVYDDGRIDYVKQ 400
Score = 81.5 bits (202), Expect = 4e-16
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDF 563
K++L + A + D N+ GY WS++D F W +GY R+G+ +VDF
Sbjct: 399 KQHLEVLSDA-IADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDF 444
Score = 63.0 bits (154), Expect = 2e-10
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++L LS AI D NV GY WSL+D F W GY
Sbjct: 399 KQHLEVLSDAI-ADGANVKGYFIWSLMDVFSWSNGYE 434
>1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A
{Thermosphaera aggregans} SCOP: c.1.8.4
Length = 481
Score = 429 bits (1105), Expect = e-141
Identities = 81/440 (18%), Positives = 133/440 (30%), Gaps = 86/440 (19%)
Query: 37 QFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQN---ADVACDSYHK 93
+FP F+ G S++ FQ E + W VH + + + ++
Sbjct: 2 KFPKDFMIGYSSSPFQFEAGIPGSEDPNSDWWVWVHDPENTAAGLVSGDFPENGPGYWNL 61
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTG----------------------------DTD 125
+ D L +G R + WSRI P +
Sbjct: 62 NQNDHDLAEKLGVNTIRVGVEWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDE 121
Query: 126 RINEKGVQYYRNLINEVLSKNIQPMVTLNHYDLPQPLQE------------FGGWANPVV 173
N++ V +Y + + + + + ++ L H+ LP L GW N
Sbjct: 122 LANKEAVNHYVEMYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEES 181
Query: 174 ADYFESFADVAFKTFGDKVPYWITINEPLDV-MGGYGYKSG--APYLNLSGLGGDYLVAH 230
F +A G+ W T+NEP V GY + G P L
Sbjct: 182 VVEFAKYAAYIAWKMGELPVMWSTMNEPNVVYEQGYMFVKGGFPP--GYLSLEAADKARR 239
Query: 231 NLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERVFQFTLGLFA 290
N+++AHA+AY K K V + + E ++ L F
Sbjct: 240 NMIQAHARAYDN----IKRFSKKPVGLIYAFQWFELLEG----PAEVFDKFKSSKLYYFT 291
Query: 291 HPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILI 350
+ G E + L D+ +N+Y+ ++
Sbjct: 292 DIVSK--GSSI-----------------------INVEYRRDLANRLDWLGVNYYSRLVY 326
Query: 351 ANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFI 410
+ P S+ W +V P+G LL + Y + +
Sbjct: 327 KIVDDKPIILHGYGFLCTPGGISPAENPCSDFGW-EVYPEGLYLLLKELYNRY-GVDLIV 384
Query: 411 TENGFSDDGRLDDEGRIDYY 430
TENG SD D R Y
Sbjct: 385 TENGVSDS---RDALRPAYL 401
Score = 194 bits (496), Expect = 6e-54
Identities = 45/323 (13%), Positives = 79/323 (24%), Gaps = 124/323 (38%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGD---VACDSYHKYKEDVAIIKDLGFQVYRFSLSWSR 743
+ W VH +GD ++ + D + + LG R + WSR
Sbjct: 26 EDPNSDWWVWVHDPENTAAGLVSGDFPENGPGYWNLNQNDHDLAEKLGVNTIRVGVEWSR 85
Query: 744 ILPTG----------------------------DIDKINEKGVQYYRNLIDELLLNNIQP 775
I P + N++ V +Y + + + +
Sbjct: 86 IFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVEMYKDWVERGRKL 145
Query: 776 M-----------------------------------------------------VKLWIT 782
+ +W T
Sbjct: 146 ILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEESVVEFAKYAAYIAWKMGELPVMWST 205
Query: 783 IKETLE-AMQGYDFKT--YAP-YLSMTGVGGEYLAAHNLLRSHAKAYRLYEKKYKPSQKG 838
+ E QGY F + P YLS+ A N++++HA+AY K K
Sbjct: 206 MNEPNVVYEQGYMFVKGGFPPGYLSLEAA---DKARRNMIQAHARAYDN----IKRFSKK 258
Query: 839 KVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGDYPPIVRQIVDQNSA 898
V L + L+ E +++ K F + G
Sbjct: 259 PVGLIYAFQWFELLE----GPAEVFDKFKSSKLYYFTDIVSK--GSSI------------ 300
Query: 899 KEGRARSRLPRFTEEEIKALKGK 921
E + L +
Sbjct: 301 -----------INVEYRRDLANR 312
Score = 134 bits (340), Expect = 1e-33
Identities = 23/126 (18%), Positives = 37/126 (29%), Gaps = 40/126 (31%)
Query: 432 FQVYRFSLSWSRILPTG----------------------------DIDKINEKGVQYYRN 463
R + WSRI P + N++ V +Y
Sbjct: 74 VNTIRVGVEWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVE 133
Query: 464 LIDELLLNNIQPMVTLYHWDLPQPLQD------------FGGWTNAIIADYFETYADFAY 511
+ + + + ++ LYHW LP L + GW N F YA +
Sbjct: 134 MYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEESVVEFAKYAAYIA 193
Query: 512 KTFGDK 517
G+
Sbjct: 194 WKMGEL 199
Score = 93.9 bits (234), Expect = 4e-20
Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 6/99 (6%)
Query: 564 SSSFDYFGLNHYTSFLVSKKTE-PSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFR 622
++ D+ G+N+Y+ + + P + + P W +V P+G
Sbjct: 310 ANRLDWLGVNYYSRLVYKIVDDKPIILHGYGFLCTPGGISPAENPCSDFGW-EVYPEGLY 368
Query: 623 ALLNWIKKEYNNPPVFITENGFSDDGQLDDQGRVDFYQG 661
LL + Y + +TENG SD D R +
Sbjct: 369 LLLKELYNRY-GVDLIVTENGVSDS---RDALRPAYLVS 403
Score = 84.3 bits (209), Expect = 5e-17
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
++ ++ KA N+ + GY WS+ DN+EW G+ +FG+V VDF +
Sbjct: 402 VSHVYSVWKA-ANEGIPVKGYLHWSLTDNYEWAQGFRQKFGLVMVDFKT 449
Score = 65.0 bits (159), Expect = 6e-11
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 950 KYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++ ++ KA + V GY WSL DN+EW G+
Sbjct: 403 SHVYSVWKAA-NEGIPVKGYLHWSLTDNYEWAQGFR 437
>4eam_A Lactase, beta-galactosidase; glycoside hydrolase, chemical biology,
allosteric activation switchable enzyme, chemical
rescue; 1.70A {Sulfolobus solfataricus P2} PDB: 4ean_A
1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A*
1gow_A 1uwi_A
Length = 489
Score = 424 bits (1092), Expect = e-139
Identities = 87/438 (19%), Positives = 148/438 (33%), Gaps = 80/438 (18%)
Query: 36 HQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQN---ADVACDSYH 92
+ FP F +G S A FQ E VH ++ + + +
Sbjct: 2 YSFPNSFRFGWSQAGFQSEMGTPGSEDPNTDGYKWVHDPENMAAGLVSGDLPENGPGYWG 61
Query: 93 KYKEDVALIRDIGFQVYRFSLSWSRILPTG--------------------------DTDR 126
YK + +G ++ R ++ WSRI P +
Sbjct: 62 NYKTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEY 121
Query: 127 INEKGVQYYRNLINEVLSKNIQPMVTLNHYDLPQPLQE-----------FGGWANPVVAD 175
N+ + +YR + ++ S+ + ++ + H+ LP L + GW +
Sbjct: 122 ANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVY 181
Query: 176 YFESFADVAFKTFGDKVPYWITINEPLDV-MGGYGYKSG--APYLNLSGLGGDYLVAHNL 232
F F+ F D V + T+NEP V GY P +N+
Sbjct: 182 EFARFSAYIAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPP--GYLSFELSRRAMYNI 239
Query: 233 LRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHP 292
++AHA+AY KS+ K V I + ++ P + +D EA E F
Sbjct: 240 IQAHARAYDG----IKSVSKKPVGIIYANSSFQPL---TDKDMEAVEMAENDNRWWFFDA 292
Query: 293 IYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIAN 352
I G+ +IV + LKG D+ +N+YT ++
Sbjct: 293 IIR--GEITRGNEKIVRDD---------------------LKGRLDWIGVNYYTRTVVKR 329
Query: 353 NNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITE 412
+ + P+S+ W P+G +L Y + +++TE
Sbjct: 330 TEKGYVSLGGYGHGCERNSVSLAGLPTSDFGWE-FFPEGLYDVLTKYWNRY-HLYMYVTE 387
Query: 413 NGFSDDGRLDDEGRIDYY 430
NG +DD D R Y
Sbjct: 388 NGIADD---ADYQRPYYL 402
Score = 204 bits (520), Expect = 4e-57
Identities = 46/292 (15%), Positives = 77/292 (26%), Gaps = 97/292 (33%)
Query: 687 GKGENIWDRLVHTNP---AAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSR 743
+ VH A +V + + YK + +G ++ R ++ WSR
Sbjct: 27 EDPNTDGYKWVHDPENMAAGLVSGDLPENGPGYWGNYKTFHDNAQKMGLKIARLNVEWSR 86
Query: 744 ILPTG--------------------------DIDKINEKGVQYYRNLIDELLLNNIQPM- 776
I P + N+ + +YR + +L + +
Sbjct: 87 IFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFKDLKSRGLYFIL 146
Query: 777 ---------------------------------------------------VKLWITIKE 785
V + T+ E
Sbjct: 147 NMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYIAWKFDDLVDEYSTMNE 206
Query: 786 TLE-AMQGYDFKT--YAP-YLSMTGVGGEYLAAHNLLRSHAKAYRLYEKKYKPSQKGKVA 841
GY + P YLS A +N++++HA+AY K K V
Sbjct: 207 PNVVGGLGYVGVKSGFPPGYLSFELS---RRAMYNIIQAHARAYDGI----KSVSKKPVG 259
Query: 842 LTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGDYPPIVRQIV 893
+ PL +D EA E F I G+ +IV
Sbjct: 260 IIYANSSFQPLTD---KDMEAVEMAENDNRWWFFDAIIR--GEITRGNEKIV 306
Score = 134 bits (339), Expect = 3e-33
Identities = 22/123 (17%), Positives = 40/123 (32%), Gaps = 37/123 (30%)
Query: 432 FQVYRFSLSWSRILPTG--------------------------DIDKINEKGVQYYRNLI 465
++ R ++ WSRI P + N+ + +YR +
Sbjct: 75 LKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIF 134
Query: 466 DELLLNNIQPMVTLYHWDLPQPLQD-----------FGGWTNAIIADYFETYADFAYKTF 514
+L + ++ +YHW LP L D GW + F ++ + F
Sbjct: 135 KDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYIAWKF 194
Query: 515 GDK 517
D
Sbjct: 195 DDL 197
Score = 92.7 bits (231), Expect = 1e-19
Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 6/105 (5%)
Query: 558 IVHVDFSSSFDYFGLNHYTSFLVSKK-TEPSPEPSFRNDANVVLSDDRKWPKGASFWLKV 616
IV D D+ G+N+YT +V + + + P W
Sbjct: 305 IVRDDLKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSVSLAGLPTSDFGWE-F 363
Query: 617 VPDGFRALLNWIKKEYNNPPVFITENGFSDDGQLDDQGRVDFYQG 661
P+G +L Y + +++TENG +DD D R +
Sbjct: 364 FPEGLYDVLTKYWNRY-HLYMYVTENGIADD---ADYQRPYYLVS 404
Score = 83.1 bits (206), Expect = 1e-16
Identities = 16/49 (32%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSS 565
++ + +A +N ++ GY WS+ DN+EW G++ RFG++ VD+++
Sbjct: 403 VSHVYQVHRA-INSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDYNT 450
Score = 64.2 bits (157), Expect = 1e-10
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 950 KYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++ + +AI +V GY WSL DN+EW G++
Sbjct: 404 SHVYQVHRAI-NSGADVRGYLHWSLADNYEWASGFS 438
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme,
thermostability, TIM barrel, alkylglucosides; 2.50A
{Pyrococcus horikoshii} SCOP: c.1.8.4
Length = 423
Score = 379 bits (975), Expect = e-122
Identities = 98/397 (24%), Positives = 168/397 (42%), Gaps = 60/397 (15%)
Query: 35 KHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVACDSYHKY 94
+FP FL+G +T++ Q+EG + + + W + + K + AC+ + Y
Sbjct: 2 PLKFPEMFLFGTATSSHQIEG----NNRWNDWWYY-----EQIGKLPYRSGKACNHWELY 52
Query: 95 KEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLN 154
++D+ L+ +G+ YRFS+ WSR+ P + + NE YR +I+ +L++ I P+VTL+
Sbjct: 53 RDDIQLMTSLGYNAYRFSIEWSRLFPEEN--KFNEDAFMKYREIIDLLLTRGITPLVTLH 110
Query: 155 HYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPL-DVMGGYGYKSG 213
H+ P + GG+ ++E + + + +KV T NEP+ VM GY
Sbjct: 111 HFTSPLWFMKKGGFLREENLKHWEKYIEKVAE-LLEKVKLVATFNEPMVYVMMGYLTAYW 169
Query: 214 APYLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKE 273
P + + VA NLL+AHA AY L K KV I + P + +
Sbjct: 170 PP--FIRSPFKAFKVAANLLKAHAIAYELLH------GKFKVGIVKNIPIILPAS-DKER 220
Query: 274 DQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKAL 333
D++AAE+ F I+S G Y + + +
Sbjct: 221 DRKAAEKADNLFNWHFLDAIWS--GKYRGVFK-----------------------TYRIP 255
Query: 334 KGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFR 393
+ DF +N+YT+ + + + D + + W V P G
Sbjct: 256 QSDADFIGVNYYTASEVR-------HTWNPLKFFFEVKLADISERKTQMGW-SVYPKGIY 307
Query: 394 ALLNWIKKEYNNPPVFITENGFSDDGRLDDEGRIDYY 430
L + P++ITENG + DDE R+++
Sbjct: 308 MALKKASRYGR--PLYITENGIATL---DDEWRVEFI 339
Score = 196 bits (500), Expect = 6e-55
Identities = 58/247 (23%), Positives = 88/247 (35%), Gaps = 59/247 (23%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFSLSWSRILP 746
+ + W AC+ + Y++D+ ++ LG+ YRFS+ WSR+ P
Sbjct: 24 NRWNDWWYY-----EQIGKLPYRSGKACNHWELYRDDIQLMTSLGYNAYRFSIEWSRLFP 78
Query: 747 TGDIDKINEKGVQYYRNLIDELLLNNIQPM------------------------------ 776
+K NE YR +ID LL I P+
Sbjct: 79 EE--NKFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSPLWFMKKGGFLREENLKHWEKY 136
Query: 777 ----------VKLWITIKETLE-AMQGYDFKTYAPYLSMTGVGGEYLAAHNLLRSHAKAY 825
VKL T E + M GY + P++ + A NLL++HA AY
Sbjct: 137 IEKVAELLEKVKLVATFNEPMVYVMMGYLTAYWPPFI--RSPFKAFKVAANLLKAHAIAY 194
Query: 826 RLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGDY 885
L K KV + N P + D++AAE+ F I+S G Y
Sbjct: 195 ELLH------GKFKVGIVKNIPIILPASD-KERDRKAAEKADNLFNWHFLDAIWS--GKY 245
Query: 886 PPIVRQI 892
+ +
Sbjct: 246 RGVFKTY 252
Score = 145 bits (369), Expect = 1e-37
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQDF 491
+ YRFS+ WSR+ P + K NE YR +ID LL I P+VTL+H+ P
Sbjct: 64 YNAYRFSIEWSRLFPEEN--KFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSPLWFMKK 121
Query: 492 GGWTNAIIADYFETYADFAYKTFGDK 517
GG+ ++E Y + + +K
Sbjct: 122 GGFLREENLKHWEKYIEKVAE-LLEK 146
Score = 79.9 bits (198), Expect = 8e-16
Identities = 26/98 (26%), Positives = 36/98 (36%), Gaps = 12/98 (12%)
Query: 564 SSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRA 623
S D+ G+N+YT+ V P A D K V P G
Sbjct: 256 QSDADFIGVNYYTASEVRHTWNPLKFFFEVKLA------DISERK-TQMGWSVYPKGIYM 308
Query: 624 LLNWIKKEYNNPPVFITENGFSDDGQLDDQGRVDFYQG 661
L + P++ITENG + DD+ RV+F
Sbjct: 309 ALKKASRYGR--PLYITENGIATL---DDEWRVEFIIQ 341
Score = 79.5 bits (197), Expect = 1e-15
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDF 563
++L + KA + D ++ GY WS +DN+EW +G+ RFG+V VD+
Sbjct: 340 IQHLQYVHKA-IEDGLDVRGYFYWSFMDNYEWKEGFGPRFGLVEVDY 385
Score = 61.4 bits (150), Expect = 6e-10
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
++L + KAI ED +V GY WS +DN+EW G+
Sbjct: 340 IQHLQYVHKAI-EDGLDVRGYFYWSFMDNYEWKEGFG 375
>3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis;
2.35A {Pyrococcus furiosus}
Length = 473
Score = 379 bits (975), Expect = e-122
Identities = 79/439 (17%), Positives = 135/439 (30%), Gaps = 96/439 (21%)
Query: 37 QFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQN---ADVACDSYHK 93
+FP F++G S + FQ E + E+ W VH + ++ + + +H
Sbjct: 3 KFPKNFMFGYSWSGFQFEMGL-PGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHL 61
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGDT----------------------------D 125
YK+D + +G R + W+RI P
Sbjct: 62 YKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEK 121
Query: 126 RINEKGVQYYRNLINEVLSKNIQPMVTLNHYDLPQPLQE------------FGGWANPVV 173
N + +++YR + ++ + ++ L H+ LP + + GW +
Sbjct: 122 IANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKT 181
Query: 174 ADYFESFADVAFKTFGDKVPYWITINEPL-DVMGGYGYKSGAPYLNLSGLGGDYLVAHNL 232
F FA D V W T+NEP GY NL
Sbjct: 182 VVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNL 241
Query: 233 LRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQEAAERVFQFTLGLFAHP 292
++AH AY K + V + + P +D+ R + H
Sbjct: 242 IQAHIGAYDA----IKEYSEKSVGVIYAFAWHDPLA-EEYKDEVEEIRKKDYEFVTILHS 296
Query: 293 IYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIAN 352
KG D+ +N+Y+ ++
Sbjct: 297 -----------------------------------------KGKLDWIGVNYYSRLVYGA 315
Query: 353 NNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITE 412
+ P P+S+ W ++ P+G LL ++ Y P+ ITE
Sbjct: 316 KDGHLVPLPGYGFMSERGGFAKSGRPASDFGW-EMYPEGLENLLKYLNNAY-ELPMIITE 373
Query: 413 NGFSDDGRLDDEGRIDYYA 431
NG +D D R Y
Sbjct: 374 NGMADA---ADRYRPHYLV 389
Score = 176 bits (448), Expect = 1e-47
Identities = 46/282 (16%), Positives = 78/282 (27%), Gaps = 96/282 (34%)
Query: 684 VPSGKGENIWDRLVHTNPAAVVDKQNGD---VACDSYHKYKEDVAIIKDLGFQVYRFSLS 740
+P + E+ W VH +GD +H YK+D I + LG R +
Sbjct: 23 LPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIE 82
Query: 741 WSRILPTGDI----------------------------DKINEKGVQYYRNLIDELLLNN 772
W+RI P N + +++YR + +
Sbjct: 83 WARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERG 142
Query: 773 IQPM-----------------------------------------------------VKL 779
+ V +
Sbjct: 143 KTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDM 202
Query: 780 WITIKETLE-AMQGYDFK--TYAP-YLSMTGVGGEYLAAHNLLRSHAKAYRLYEKKYKPS 835
W T+ E QGY + P YLS A NL+++H AY ++
Sbjct: 203 WSTMNEPNVVYNQGYINLRSGFPPGYLSFEAA---EKAKFNLIQAHIGAYDAIKEY---- 255
Query: 836 QKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHP 877
+ V + ++ PL +D+ R ++F H
Sbjct: 256 SEKSVGVIYAFAWHDPLAE-EYKDEVEEIRKKDYEFVTILHS 296
Score = 131 bits (332), Expect = 1e-32
Identities = 21/126 (16%), Positives = 34/126 (26%), Gaps = 40/126 (31%)
Query: 432 FQVYRFSLSWSRILPTGDI----------------------------DKINEKGVQYYRN 463
R + W+RI P N + +++YR
Sbjct: 74 MDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRK 133
Query: 464 LIDELLLNNIQPMVTLYHWDLPQPLQD------------FGGWTNAIIADYFETYADFAY 511
+ + ++ LYHW LP + D GW + F +A F
Sbjct: 134 IYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVA 193
Query: 512 KTFGDK 517
D
Sbjct: 194 YHLDDL 199
Score = 90.8 bits (226), Expect = 3e-19
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 6/99 (6%)
Query: 564 SSSFDYFGLNHYTSFLVS-KKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFR 622
D+ G+N+Y+ + K P P + + P W ++ P+G
Sbjct: 297 KGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGW-EMYPEGLE 355
Query: 623 ALLNWIKKEYNNPPVFITENGFSDDGQLDDQGRVDFYQG 661
LL ++ Y P+ ITENG +D D+ R +
Sbjct: 356 NLLKYLNNAY-ELPMIITENGMADA---ADRYRPHYLVS 390
Score = 82.0 bits (203), Expect = 2e-16
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDF 563
+L A+ A + + ++ GY WS+ DN+EW G+ RFG+V+VDF
Sbjct: 389 VSHLKAVYNA-MKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDF 434
Score = 63.5 bits (155), Expect = 2e-10
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 951 YLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCGYT 985
+L A+ A+ ++ +V GY WSL DN+EW G+
Sbjct: 391 HLKAVYNAM-KEGADVRGYLHWSLTDNYEWAQGFR 424
>2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase;
2.30A {Escherichia coli}
Length = 479
Score = 309 bits (793), Expect = 3e-95
Identities = 117/431 (27%), Positives = 194/431 (45%), Gaps = 67/431 (15%)
Query: 33 MNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNA-------- 84
+ K P FLWG + AA QVEG WN+ GKG +I D L + ++
Sbjct: 3 VKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYP 62
Query: 85 -DVACDSYHKYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVL 143
A D Y YKED+ L ++GF+ +R S++W+RI P GD + NE+G+++Y ++ +E+L
Sbjct: 63 NHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELL 122
Query: 144 SKNIQPMVTLNHYDLPQPL-QEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPL 202
NI+P++TL+H+++P L Q++G W N V D+F FA+V F+ + KV YW+T NE
Sbjct: 123 KYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEIN 182
Query: 203 DVMGGYGYKSGAPYLNLSGLGGD------YLVAHNLLRAHAKAYRLYEKKYKSLQKGKVS 256
+ G + + Y V H+ A A A + + + KV
Sbjct: 183 NQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINP---EMKVG 239
Query: 257 ITLDSCNYYPHNATSK-EDQEAAERVFQFTLGLFAHPIYSEA---GDYPPIVRQIVDQNS 312
L YP + +D A+ + ++++ G YP V ++
Sbjct: 240 CMLAMVPLYP--YSCNPDDVMFAQESMRERY------VFTDVQLRGYYPSYVLNEWERRG 291
Query: 313 AKEGRARSRLPRFTEEEIKALK-GSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATF 371
+ + ++ L+ G+ D+ ++Y + + A T + +
Sbjct: 292 FN--------IKMEDGDLDVLREGTCDYLGFSYYMT-------NAVKAEGGTGDAISGFE 336
Query: 372 SQDPNWPSSNSPWLKVV-------PDGFRALLNWIKKEYNNPPVFITENGF------SDD 418
PN P++K P G R L + + Y P+FI ENGF +D
Sbjct: 337 GSVPN------PYVKASDWGWQIDPVGLRYALCELYERYQR-PLFIVENGFGAYDKVEED 389
Query: 419 GRLDDEGRIDY 429
G ++D+ RIDY
Sbjct: 390 GSINDDYRIDY 400
Score = 133 bits (338), Expect = 3e-33
Identities = 35/90 (38%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD- 490
F+ +R S++W+RI P GD + NE+G+++Y ++ DELL NI+P++TL H+++P L
Sbjct: 85 FKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQ 144
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK-KY 519
+G WTN + D+F +A+ ++ + K KY
Sbjct: 145 YGSWTNRKVVDFFVRFAEVVFERYKHKVKY 174
Score = 132 bits (334), Expect = 1e-32
Identities = 63/293 (21%), Positives = 106/293 (36%), Gaps = 78/293 (26%)
Query: 687 GKGENIWD---RLVHTNPAAVVDKQNGD------VACDSYHKYKEDVAIIKDLGFQVYRF 737
GKG +I D H P + + A D Y YKED+ + ++GF+ +R
Sbjct: 31 GKGPSICDVLTGGAHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRT 90
Query: 738 SLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPM--------------------- 776
S++W+RI P GD + NE+G+++Y ++ DELL NI+P+
Sbjct: 91 SIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTN 150
Query: 777 ---------------------VKLWITIKETLEAMQGYDFKTYAPYLSMTGVGGE----- 810
VK W+T E Q Y V E
Sbjct: 151 RKVVDFFVRFAEVVFERYKHKVKYWMTFNEI--NNQRNWRAPLFGYCCSGVVYTEHENPE 208
Query: 811 ---YLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYI 867
Y H+ + A A + ++ P + KV L YP + +D A+ +
Sbjct: 209 ETMYQVLHHQFVASALAVKAA-RRINP--EMKVGCMLAMVPLYPYSCNP-DDVMFAQESM 264
Query: 868 QFKFGLFAHPIYSQA-GDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALK 919
+ ++ +F Q G YP V ++ + + ++ L+
Sbjct: 265 RERY-VFTDV---QLRGYYPSYVLNEWERRGFN--------IKMEDGDLDVLR 305
Score = 47.1 bits (113), Expect = 2e-05
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 568 DYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVL-----SDDRKWPKGASFWLKVVPDGFR 622
DY G ++Y + V E + V + D W + P G R
Sbjct: 310 DYLGFSYYMTNAVK--AEGGTGDAISGFEGSVPNPYVKASDWGWQ--------IDPVGLR 359
Query: 623 ALLNWIKKEYNNPPVFITENGF------SDDGQLDDQGRVDFYQ 660
L + + Y P+FI ENGF +DG ++D R+D+ +
Sbjct: 360 YALCELYERYQR-PLFIVENGFGAYDKVEEDGSINDDYRIDYLR 402
Score = 40.6 bits (96), Expect = 0.002
Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDG-YTCRFGIVHVD 562
+ ++ M+KA+ D +++GYT W +D + G Y+ R+G ++V+
Sbjct: 402 RAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVN 448
Score = 36.3 bits (85), Expect = 0.045
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLD 976
++ + KA+ D +++GYT W +D
Sbjct: 402 RAHIEEMKKAVTYDGVDLMGYTPWGCID 429
>3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology,
midwest center for structu genomics, MCSG, glycoside
hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus
plantarum}
Length = 481
Score = 307 bits (790), Expect = 6e-95
Identities = 124/428 (28%), Positives = 198/428 (46%), Gaps = 61/428 (14%)
Query: 32 QMNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADV----- 86
+ FP GFLWG + AA Q+EG + E GKG + D + + ++ + V
Sbjct: 5 TIKGRAFPEGFLWGGAVAAHQLEGGYKEGGKGLSTADIMTLGTNERPREITDGVVAGKYY 64
Query: 87 ----ACDSYHKYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEV 142
A D YH+Y ED+ L ++GF+ +R S++W+RI P GD NE G+Q+Y +L +E
Sbjct: 65 PNHQAIDFYHRYPEDIELFAEMGFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDEC 124
Query: 143 LSKNIQPMVTLNHYDLPQPL-QEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEP 201
L IQP+VTL H+++P L +++GGW N + ++ +FA V F+ + DKV YW+T NE
Sbjct: 125 LKNGIQPVVTLAHFEMPYHLVKQYGGWRNRKLIQFYLNFAKVCFERYRDKVTYWMTFNE- 183
Query: 202 LDVMGGYGYKSGAPYLNLSGLGGD---------YLVAHNLLRAHAKAYRLYEKKYKSLQK 252
++ + GA + SG+ Y AH L A A A +L +
Sbjct: 184 INNQTNFES-DGAMLTD-SGIIHQPGENRERWMYQAAHYELVASAAAVQLGHQINP---D 238
Query: 253 GKVSITLDSCNYYPHNATSK-EDQEAAERVFQFTLGLFAHPIYSEA---GDYPPIVRQIV 308
++ + C YP T+ D A+R Q +++ G YP +R
Sbjct: 239 FQIGCMIAMCPIYP--LTAAPADVLFAQRAMQTRF------YFADVHCNGTYPQWLRNRF 290
Query: 309 DQNSAKEGRARSRLPRFTEEEIKALK-GSFDFFALNHYTSILIANNNHTSNAPPSTINDR 367
+ T E++K L+ G+ D+ ++Y S T +
Sbjct: 291 ESEHFN--------LDITAEDLKILQAGTVDYIGFSYYMS-------FTVKDTGKLAYNE 335
Query: 368 AATFSQDPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITENGF------SDDGRL 421
++P +S+ W +V P G R +NW Y+ P+FI ENG + D ++
Sbjct: 336 EHDLVKNPYVKASDWGW-QVDPVGLRYAMNWFTDRYHL-PLFIVENGLGAIDKKTADNQI 393
Query: 422 DDEGRIDY 429
D+ RIDY
Sbjct: 394 HDDYRIDY 401
Score = 133 bits (338), Expect = 3e-33
Identities = 36/90 (40%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD- 490
F+ +R S++W+RI P GD + NE G+Q+Y +L DE L N IQP+VTL H+++P L
Sbjct: 88 FKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAHFEMPYHLVKQ 147
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK-KY 519
+GGW N + ++ +A ++ + DK Y
Sbjct: 148 YGGWRNRKLIQFYLNFAKVCFERYRDKVTY 177
Score = 129 bits (327), Expect = 9e-32
Identities = 70/291 (24%), Positives = 107/291 (36%), Gaps = 74/291 (25%)
Query: 687 GKGENIWDRLVHTNPAAVVDKQNGDV---------ACDSYHKYKEDVAIIKDLGFQVYRF 737
GKG + D + + +G V A D YH+Y ED+ + ++GF+ +R
Sbjct: 34 GKGLSTADIMTLGTNERPREITDGVVAGKYYPNHQAIDFYHRYPEDIELFAEMGFKCFRT 93
Query: 738 SLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPM--------------------- 776
S++W+RI P GD + NE G+Q+Y +L DE L N IQP+
Sbjct: 94 SIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAHFEMPYHLVKQYGGWRN 153
Query: 777 ---------------------VKLWITIKE---TLEAMQGYDFKTYAPYLSMTGVGGE-- 810
V W+T E T + + G E
Sbjct: 154 RKLIQFYLNFAKVCFERYRDKVTYWMTFNEINNQTNFESDGAMLTDSGIIHQPGENRERW 213
Query: 811 -YLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQF 869
Y AAH L + A A +L + P ++ + YPL + D A+R +Q
Sbjct: 214 MYQAAHYELVASAAAVQLG-HQINP--DFQIGCMIAMCPIYPLTAAP-ADVLFAQRAMQT 269
Query: 870 KFGLFAHPIYSQA-GDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALK 919
+F FA G YP +R + T E++K L+
Sbjct: 270 RF-YFADV---HCNGTYPQWLRNRFESEHFN--------LDITAEDLKILQ 308
Score = 47.9 bits (115), Expect = 1e-05
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 18/101 (17%)
Query: 568 DYFGLNHYTSFLVSKKTEPSPEPSFRNDAN--VVLSDDRKWPKGASFWLKVVPDGFRALL 625
DY G ++Y SF V + + N V SD W G W +V P G R +
Sbjct: 313 DYIGFSYYMSFTVKDTGKLAYNEEHDLVKNPYVKASD---W--G---W-QVDPVGLRYAM 363
Query: 626 NWIKKEYNNPPVFITENGF------SDDGQLDDQGRVDFYQ 660
NW Y+ P +FI ENG + D Q+ D R+D+
Sbjct: 364 NWFTDRYHLP-LFIVENGLGAIDKKTADNQIHDDYRIDYLT 403
Score = 39.8 bits (94), Expect = 0.004
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDG-YTCRFGIVHVD 562
+L ++ A++ D ++IGYT W +D G + R+G ++VD
Sbjct: 403 TDHLRQIKLAVLEDGVDLIGYTPWGCIDLVAASTGQMSKRYGFIYVD 449
Score = 37.5 bits (88), Expect = 0.021
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLD 976
+L + A+ ED ++IGYT W +D
Sbjct: 403 TDHLRQIKLAVLEDGVDLIGYTPWGCID 430
>4dde_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology,
protein structure initiati midwest center for structural
genomics, MCSG; HET: BG6; 1.45A {Streptococcus mutans}
PDB: 3pn8_A* 4f66_A* 4f79_A*
Length = 480
Score = 306 bits (787), Expect = 2e-94
Identities = 134/435 (30%), Positives = 202/435 (46%), Gaps = 73/435 (16%)
Query: 32 QMNKHQFPPGFLWGCSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNAD------ 85
M+K P FLWG + AA Q+EG W E GKG ++ D + + + ++
Sbjct: 3 AMSK--LPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITAGVLEGKYY 60
Query: 86 ---VACDSYHKYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEV 142
A D YH YKEDV L ++GF+ +R S++W+RI P GD NE G+Q+Y +L +E
Sbjct: 61 PNHEAIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDEC 120
Query: 143 LSKNIQPMVTLNHYDLPQPL-QEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEP 201
L I+P+VTL+H++LP L E+GG+ N V D+F FA+V F+ + DKV YW+T NE
Sbjct: 121 LKYGIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNE- 179
Query: 202 LDVMGGYGYKSGAPYLNLSGLGGD---------YLVAHNLLRAHAKAYRLYEKKYKSLQK 252
++ Y P+ N SG+ Y AH L A A+A ++
Sbjct: 180 INNQANYQEDFA-PFTN-SGIVYKEGDDREAIMYQAAHYELVASARAVKIGHAINP---N 234
Query: 253 GKVSITLDSCNYYPHNATSK-EDQEAAERVFQFTLGLFAHPIYSEA---GDYPPIVRQIV 308
+ + C YP AT +D A++ Q +++ G YP + +
Sbjct: 235 LNIGCMVAMCPIYP--ATCNPKDILMAQKAMQKRY------YFADVHVHGFYPEHIFKYW 286
Query: 309 DQNSAKEGRARSRLPRFTEEEIKALK-GSFDFFALNHYTSILIANNNHTSNAPPSTINDR 367
++ + K FTE + K L G+ D+ ++Y S +I ++ + D
Sbjct: 287 ERKAIK--------VDFTERDKKDLFEGTVDYIGFSYYMSFVI-----DAHRENNPYYDY 333
Query: 368 AATFSQDPNWPSSNSPWLKVV-------PDGFRALLNWIKKEYNNPPVFITENGF----- 415
T N P++K P G R LNW Y+ P+FI ENGF
Sbjct: 334 LETEDLVKN------PYVKASDWDWQIDPQGLRYALNWFTDMYHL-PLFIVENGFGAIDQ 386
Query: 416 -SDDGRLDDEGRIDY 429
DG + D+ RIDY
Sbjct: 387 VEADGMVHDDYRIDY 401
Score = 133 bits (338), Expect = 3e-33
Identities = 38/90 (42%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Query: 432 FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQD- 490
F+ +R S++W+RI P GD + NE G+Q+Y +L DE L I+P+VTL H++LP L
Sbjct: 84 FKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYHLVTE 143
Query: 491 FGGWTNAIIADYFETYADFAYKTFGDK-KY 519
+GG+TN + D+F +A+ ++ + DK KY
Sbjct: 144 YGGFTNRKVIDFFVHFAEVCFRRYKDKVKY 173
Score = 131 bits (331), Expect = 3e-32
Identities = 69/294 (23%), Positives = 116/294 (39%), Gaps = 80/294 (27%)
Query: 687 GKGENIWDRLVHTN-------PAAVVDKQNGD--VACDSYHKYKEDVAIIKDLGFQVYRF 737
GKG ++ D + A V++ + A D YH YKEDV + ++GF+ +R
Sbjct: 30 GKGISVADVMTAGRHGVAREITAGVLEGKYYPNHEAIDFYHHYKEDVKLFAEMGFKCFRT 89
Query: 738 SLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPM--------------------- 776
S++W+RI P GD + NE G+Q+Y +L DE L I+P+
Sbjct: 90 SIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYHLVTEYGGFTN 149
Query: 777 ---------------------VKLWITIKETLEAMQGYDFKTYAPYLSMTGVGGE----- 810
VK W+T E Q + +AP+ + +G+ +
Sbjct: 150 RKVIDFFVHFAEVCFRRYKDKVKYWMTFNEI--NNQANYQEDFAPFTN-SGIVYKEGDDR 206
Query: 811 ----YLAAHNLLRSHAKAYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERY 866
Y AAH L + A+A ++ P + + YP + +D A++
Sbjct: 207 EAIMYQAAHYELVASARAVKIG-HAINP--NLNIGCMVAMCPIYPATCNP-KDILMAQKA 262
Query: 867 IQFKFGLFAHPIYSQA-GDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALK 919
+Q ++ FA G YP + + ++ + K FTE + K L
Sbjct: 263 MQKRY-YFADV---HVHGFYPEHIFKYWERKAIK--------VDFTERDKKDLF 304
Score = 48.6 bits (117), Expect = 8e-06
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 20/104 (19%)
Query: 568 DYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVL-----SDDRKWPKGASFWLKVVPDGFR 622
DY G ++Y SF++ E +P + ++V + D W + P G R
Sbjct: 309 DYIGFSYYMSFVIDAHRENNPYYDYLETEDLVKNPYVKASDWDWQ--------IDPQGLR 360
Query: 623 ALLNWIKKEYNNPPVFITENGF------SDDGQLDDQGRVDFYQ 660
LNW Y+ P+FI ENGF DG + D R+D+
Sbjct: 361 YALNWFTDMYHL-PLFIVENGFGAIDQVEADGMVHDDYRIDYLG 403
Score = 39.8 bits (94), Expect = 0.004
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDG-YTCRFGIVHVD 562
++ M KA+ D ++GYT W +D G R+G ++VD
Sbjct: 403 GAHIKEMIKAVDEDGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVD 449
Score = 37.5 bits (88), Expect = 0.022
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 949 NKYLTALSKAIGEDKCNVIGYTAWSLLD 976
++ + KA+ ED ++GYT W +D
Sbjct: 403 GAHIKEMIKAVDEDGVELMGYTPWGCID 430
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 69.3 bits (169), Expect = 6e-12
Identities = 110/648 (16%), Positives = 183/648 (28%), Gaps = 216/648 (33%)
Query: 249 SLQKGKVSITLD-SCNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQI 307
+L G + L + + +E F L P A D P
Sbjct: 10 TLSHGSLEHVLLVPTASFFIASQLQEQ-------FNKIL---PEPTEGFAADDEPT---- 55
Query: 308 VDQNSAKEGRARSRLPRFTEEEIKALK-GSFD---FFALNHYTS-ILIANNNHTSNAPPS 362
+ E + + ++ K G FD L + + L N+ H A
Sbjct: 56 ----TPAELVGK--FLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLL 109
Query: 363 TIND--------------RAATFSQDPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPV 408
ND A ++ P SNS + V +G A L +
Sbjct: 110 QENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEG-NAQL------V---AI 159
Query: 409 FITENGFSDDGRLDDEGRIDYYAFQVYRFS-LSWSRILPTGDIDKINEKGVQY--YRNLI 465
F G +G D Y F L R L Y Y L+
Sbjct: 160 F---GG---------QGNTDDY------FEEL---RDL--------------YQTYHVLV 184
Query: 466 DELL------LNNIQPMVTLYHWDLPQPLQDFGGW-TNAIIA---DYFETYADFAYKTFG 515
+L+ L+ + Q L + W N DY + G
Sbjct: 185 GDLIKFSAETLSELIRTTLDAEKVFTQGL-NILEWLENPSNTPDKDYL-LSIPISCPLIG 242
Query: 516 DKKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVH---VDFSSSFDYFGL 572
+ + +V ++G+T + + G G+V + + S++ F +
Sbjct: 243 ----VIQLAHYVVT--AKLLGFTPGELRSYLKGATG--HSQGLVTAVAIAETDSWESFFV 294
Query: 573 NHYT----SFLV---SKKTEP--SPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRA 623
+ F + + P S PS D+ L ++ P S L +
Sbjct: 295 SVRKAITVLFFIGVRCYEAYPNTSLPPSILEDS---LENNEGVP---SPMLSISNLTQEQ 348
Query: 624 LLNWIKKE--------------YNNPPVF-IT-------------ENGFSDDGQLDDQGR 655
+ +++ K N ++ + G DQ R
Sbjct: 349 VQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGL--DQSR 406
Query: 656 VDFYQ---GLSVSF-PCFWFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGD 711
+ F + S F P V PF SH L PA D N D
Sbjct: 407 IPFSERKLKFSNRFLP-----VASPFH--SHL------------L---VPA--SDLINKD 442
Query: 712 VACDSYHKYKEDVAI-IKDLGFQVYRFSLSWSRILPTG-DIDKINEKGVQYYRNLIDELL 769
+ K +V+ KD+ VY G D+ ++ ++D ++
Sbjct: 443 LV-------KNNVSFNAKDIQIPVYDTF--------DGSDLRVLSGSIS---ERIVDCII 484
Query: 770 LNNIQPMVKLWITIKETLEAMQGYDFKTYAPYLSMTGVGGEYLAAHNL 817
++ W T + +A DF P +G+G L N
Sbjct: 485 RLPVK-----WETTTQF-KATHILDF---GP-GGASGLGV--LTHRNK 520
Score = 57.0 bits (137), Expect = 3e-08
Identities = 82/507 (16%), Positives = 137/507 (27%), Gaps = 178/507 (35%)
Query: 116 SRILPTGDTDRINEKGV--QYY--RNLINEVLSKNIQPMVTLNHYDLPQPLQE------- 164
+++L DT + K + Y R + K L + + E
Sbjct: 106 AKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNS-------ALFRAVGEGNAQLVA 158
Query: 165 -FGGWANPVVADYFESFADVAFKTFGDKVPYWITI-------------------NEPLDV 204
FGG N DYFE D+ ++T+ V I + L++
Sbjct: 159 IFGGQGNT--DDYFEELRDL-YQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNI 215
Query: 205 MG---------GYGYKSGAPY-LNLSGLG--GDYLVAHNLLRAHAKAYRLYEKKYKSLQK 252
+ Y P L G+ Y+V LL R Y K +
Sbjct: 216 LEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQ 275
Query: 253 GKVSITLDSCNYYPHNATSKED-QEAAERVFQ--FTLGLFAHPIYSEAGDYPPIVRQIVD 309
G V+ + S E + + F +G+ + Y P I+ ++
Sbjct: 276 GLVTAVAIAE------TDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLE 329
Query: 310 QNSAKEGRAR-----SRLPR-FTEEEIKALKGSFDFFALNHYTSILIANNNHTSN----- 358
N EG S L + ++ + L + I+ N N
Sbjct: 330 NN---EGVPSPMLSISNLTQEQVQDYVNKTNSH-----LPAGKQVEISLVNGAKNLVVSG 381
Query: 359 ----------------APPSTINDRAATFSQ-DPNW-----PSS---NSPWLKVVPDGFR 393
AP R FS+ + P + +S L D
Sbjct: 382 PPQSLYGLNLTLRKAKAPSGLDQSRI-PFSERKLKFSNRFLPVASPFHSHLLVPASDLIN 440
Query: 394 ALLNWIKKEYNNP----PVFITENGFSDDGRLDDEGRIDYYAFQVYRFSLSWSRILPTGD 449
L +N PV+ T +G SD +V S+S
Sbjct: 441 KDLVKNNVSFNAKDIQIPVYDTFDG-SD--------------LRVLSGSIS--------- 476
Query: 450 IDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQPLQ-----DFG------------ 492
++D ++ P+ W+ + DFG
Sbjct: 477 ------------ERIVDCII---RLPV----KWETTTQFKATHILDFGPGGASGLGVLTH 517
Query: 493 ----G-WTNAIIADYFETY--ADFAYK 512
G I+A + D+ +K
Sbjct: 518 RNKDGTGVRVIVAGTLDINPDDDYGFK 544
Score = 53.5 bits (128), Expect = 4e-07
Identities = 102/676 (15%), Positives = 176/676 (26%), Gaps = 280/676 (41%)
Query: 157 DLPQPLQEFGGWANPV-VADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKSGAP 215
LP+P + F P A+ F + + ++ ++ +
Sbjct: 40 ILPEPTEGFAADDEPTTPAELVGKF--LGY------------VSSLVEPSKVGQFDQVLN 85
Query: 216 YLNLSGLGGDYLVAHNLLRAHAKAYRLYEKKYKSLQKGKVSITLDSCNYYPHNATSKEDQ 275
L+ YL +++ HA A +L ++ +L K K I NY +K
Sbjct: 86 LC-LTEFENCYLEGNDI---HALAAKLLQENDTTLVKTKELIK----NYITARIMAKRPF 137
Query: 276 ---------EAAER-------VF--QFTLGLFAHP------IYSEAGDYPPIVRQIVDQN 311
A +F Q G +Y Y +V ++
Sbjct: 138 DKKSNSALFRAVGEGNAQLVAIFGGQ---GNTDDYFEELRDLYQ---TYHVLVGDLIK-- 189
Query: 312 SAKEGRARSRLPRFTEEEIKA-------------LKG-----SFDFFA------------ 341
+ L + A L+ D+
Sbjct: 190 -----FSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVI 244
Query: 342 -LNHYTSILIANNNHTSNAPPSTINDR-------------AATFSQDPNWPSSNSPWLKV 387
L HY P + A ++ +W S +
Sbjct: 245 QLAHYVVTA-----KLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWES----FFVS 295
Query: 388 VPDGFRALLNWI----KKEYNNPPVFITENGFSDDGRLDDEGRIDYYAFQVYRFSLSWSR 443
V L +I + Y P + + D ++EG
Sbjct: 296 VRKAITVLF-FIGVRCYEAY--PNTSLPPSILEDSLE-NNEG------------------ 333
Query: 444 ILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWDLPQP-LQDFGGWTNAIIADY 502
+P+ PM+++ +L Q +QD+ TN
Sbjct: 334 -VPS---------------------------PMLSIS--NLTQEQVQDYVNKTN------ 357
Query: 503 FETYADFAYKTFGDKKYLTAMQK---ALVNDKCNII--GYTAWSILDNFE-WLDGYTCRF 556
+L A ++ +LVN N++ G S L L
Sbjct: 358 ---------------SHLPAGKQVEISLVNGAKNLVVSGPPQ-S-LYGLNLTLRKAKAPS 400
Query: 557 GI--VHVDFSS---SFDYFGLNHYTSFLVSKKTEP--SPEPSFRNDANVVLSDDRKWPKG 609
G+ + FS F FL P S A+ +++ D
Sbjct: 401 GLDQSRIPFSERKLKF-------SNRFLPV--ASPFHSH---LLVPASDLINKDL-VKNN 447
Query: 610 ASFW---LKVVPDGFRALLNWIKKEYNNPPVFITENGFSD----DGQLDDQGRVDFYQGL 662
SF +++ PV+ T +G SD G + ++ VD
Sbjct: 448 VSFNAKDIQI-------------------PVYDTFDG-SDLRVLSGSISERI-VD----C 482
Query: 663 SVSFPCFWFMVNVPFFVPSHYV---P---SGKGENIWDRLVHTN---------PAAVVDK 707
+ P W F +H + P SG G L H N A +D
Sbjct: 483 IIRLPVKW--ETTTQFKATHILDFGPGGASGLG-----VLTHRNKDGTGVRVIVAGTLDI 535
Query: 708 Q-NGDVACDSYHKYKE 722
+ D +K+
Sbjct: 536 NPDDDYG------FKQ 545
Score = 51.6 bits (123), Expect = 2e-06
Identities = 103/601 (17%), Positives = 183/601 (30%), Gaps = 192/601 (31%)
Query: 361 PSTINDRAATFSQDPNWPSSNSPW-----LKVVPDGFRALLNWIKKEYNNPPVFITENGF 415
P T++ + + + L+ + F +L P TE
Sbjct: 8 PLTLSHGSLEHV----LLVPTASFFIASQLQ---EQFNKIL---------PEP--TEGFA 49
Query: 416 SDDGRLDDEGRIDYYAFQVYRFSLSW--SRILPT--GDIDKINEKGVQYYRNLIDELLLN 471
+DD + + +F L + S + P+ G D++ + + N L N
Sbjct: 50 ADD---EPTTPAELVG----KF-LGYVSSLVEPSKVGQFDQVLNLCLTEFENCY--LEGN 99
Query: 472 NIQPMVTLYHWDLPQPLQDFGGWTNAIIADYFETYADFAYKTFGDKKYLTAMQKALVNDK 531
+I + + L T +I +Y A K DKK +A+ +A+
Sbjct: 100 DIHALAAKLLQENDTTLVK----TKELIKNYIT--ARIMAKRPFDKKSNSALFRAVGEGN 153
Query: 532 CNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSFDYFG-L----NHYTSFLVSKKTEP 586
+ FG ++ DYF L Y +
Sbjct: 154 AQL-----------------VAI-FG----GQGNTDDYFEELRDLYQTYHVLVGD----- 186
Query: 587 SPEPSFRNDANVVLSDDRKWPKGASFWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSD 646
+ LS+ + A KV G +L W++ N P
Sbjct: 187 -----LIKFSAETLSELIRTTLDAE---KVFTQGLN-ILEWLENPSNTPD---------- 227
Query: 647 DGQLDDQGRVDFYQGLSVSFPCFWFMVNVPFFVPSHYVPSGKGENIWDRLVHTNPAAVVD 706
D+ + +S P ++ V HYV + K L+ P +
Sbjct: 228 ---------KDYLLSIPISCP----LIGVIQLA--HYVVTAK-------LLGFTPGELRS 265
Query: 707 KQNGDVAC----------------DSYHKYKEDVAIIKDLGFQVYRFSLSWSRI-LPTGD 749
G +S+ + I L F R ++ LP
Sbjct: 266 YLKGATGHSQGLVTAVAIAETDSWESF--FVSVRKAITVLFFIGVRCYEAYPNTSLPP-- 321
Query: 750 IDKINEKGVQYYRNLIDELLLNNIQ---PMVKLWITIK-ETLEAMQGY--DFKTYAP--- 800
+++++ L NN PM+ +I T E +Q Y ++ P
Sbjct: 322 -------------SILEDSLENNEGVPSPML----SISNLTQEQVQDYVNKTNSHLPAGK 364
Query: 801 --YLSMT-G-----VGG--EYLAAHNL-LRSHAKAYRLYEKKYKP-SQKGKVA-----LT 843
+S+ G V G + L NL LR AKA ++ P S++ K+ L
Sbjct: 365 QVEISLVNGAKNLVVSGPPQSLYGLNLTLRK-AKAPSGLDQSRIPFSER-KLKFSNRFLP 422
Query: 844 LNTHFNYPL--DPSSKEDQEAAERYIQFKFGLFAHPIYS-------QAGDYPPIVRQIVD 894
+ + F+ L S +++ + + F P+Y + I +IVD
Sbjct: 423 VASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLS-GSISERIVD 481
Query: 895 Q 895
Sbjct: 482 C 482
Score = 44.3 bits (104), Expect = 2e-04
Identities = 42/334 (12%), Positives = 83/334 (24%), Gaps = 100/334 (29%)
Query: 673 VNVPFFVP-SHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAII---- 727
+ VP + + + ++ P D E
Sbjct: 16 LEHVLLVPTASFFI---ASQLQEQFNKILPEPTEGFAADD----------EPTTPAELVG 62
Query: 728 KDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKLWITIKETL 787
K LG+ S G D++ + + N L N+I + + +T
Sbjct: 63 KFLGYVSSLVEPS-----KVGQFDQVLNLCLTEFENCY--LEGNDIHALAAKLLQENDTT 115
Query: 788 EAMQGYDFKTYAPYLSMTGVGGEYLAAHN--LLRS-HAKAYRLYEKKYKPSQKGKVAL-- 842
K Y + + N L R+ +L A+
Sbjct: 116 LVKTKELIKNY--ITARIMAKRPFDKKSNSALFRAVGEGNAQLV------------AIFG 161
Query: 843 ---TLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAGDYPPIVRQIVDQNSAK 899
+ +F +E ++ +Y Y +V ++
Sbjct: 162 GQGNTDDYF--------EELRD----------------LYQ---TYHVLVGDLIK----- 189
Query: 900 EGRARSRLPRFTEEEIKALK--GKTEEEINALKGKQK-----YLT--ALS-KAIGEDKCN 949
+ L + A K + + L+ YL +S IG +
Sbjct: 190 --FSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLA 247
Query: 950 KYLTALSKAIGEDKCNVIGYTAWSLLDNFEWLCG 983
Y+ ++G+T L + G
Sbjct: 248 HYVVT---------AKLLGFTPGELRSYLKGATG 272
Score = 43.9 bits (103), Expect = 3e-04
Identities = 53/315 (16%), Positives = 104/315 (33%), Gaps = 100/315 (31%)
Query: 683 YVPSGKGENIWDR---------------LVHTNPAAVVDKQNGDVACDSYHKYKEDVAII 727
Y S +++W+R +V NP + G+ Y
Sbjct: 1636 YKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSA----- 1690
Query: 728 KDLGFQVYRFSLSWSRILPTGDIDKINEKGVQY-YRNLIDELLLN---NIQPMVKLW-IT 782
+ F+ + + +INE Y +R+ ++ LL+ QP + L
Sbjct: 1691 --MIFETIVDGKLKTEKI----FKEINEHSTSYTFRS--EKGLLSATQFTQPALTLMEKA 1742
Query: 783 IKETLEAMQGY--DFKTYAPYLSMTGVG---GEY--LAAH----------NLL--RSHAK 823
E L++ +G T+A G GEY LA+ ++ R
Sbjct: 1743 AFEDLKS-KGLIPADATFA--------GHSLGEYAALASLADVMSIESLVEVVFYRGMTM 1793
Query: 824 AYRLYEKKYKPSQKGKVALTLNTHFNYPLDPSSKEDQEAAERYIQFKFGLFAHPIYSQAG 883
+ + S G +A+ P ++ QEA + ++ + + G
Sbjct: 1794 QVAVPRDELGRSNYGMIAIN-------PGRVAASFSQEALQYVVE--------RVGKRTG 1838
Query: 884 DYPPIV------RQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTEEEINALKGKQKYLT 937
IV +Q V +A G +++AL +N +K ++ +
Sbjct: 1839 WLVEIVNYNVENQQYV---AA--G------------DLRALD-TVTNVLNFIKLQKIDII 1880
Query: 938 ALSKAIGEDKCNKYL 952
L K++ ++ +L
Sbjct: 1881 ELQKSLSLEEVEGHL 1895
Score = 33.9 bits (77), Expect = 0.32
Identities = 31/193 (16%), Positives = 54/193 (27%), Gaps = 64/193 (33%)
Query: 400 KKEYNNPPVF--ITENGFSDDGRLDDEGRIDYYAFQVYRFSLSWSRILPTGDIDKINEKG 457
Y + R D + Y FS+ DI N
Sbjct: 1633 MDLYKTSKAAQDVWN-------------RADNHFKDTYGFSIL--------DIVINNPVN 1671
Query: 458 VQ-YYRNLIDELLLNNIQPMVTLYHWDLPQPLQDFGGWTNAIIADYFETYADFAYKTFGD 516
+ ++ + + N M+ + + D T I + E + ++ +
Sbjct: 1672 LTIHFGGEKGKRIRENYSAMIF-------ETIVDGKLKTEKIFKEINEHSTSYTFR--SE 1722
Query: 517 KKYLTAM---QKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFSSSFDYF-GL 572
K L+A Q AL ++ A+ L G++ D F G
Sbjct: 1723 KGLLSATQFTQPALT-----LMEKAAFEDLK--SK--------GLIPAD-----ATFAG- 1761
Query: 573 NH----YTSFLVS 581
H Y + L S
Sbjct: 1762 -HSLGEYAA-LAS 1772
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 61.4 bits (148), Expect = 1e-09
Identities = 76/590 (12%), Positives = 172/590 (29%), Gaps = 167/590 (28%)
Query: 68 DHLVHTQPDLVKDRQNADVACDS----YHKYKEDVALIRDIGFQVYRFSLSWSRILPTGD 123
DH++ ++ + + K+ E+V L + F + + P+
Sbjct: 52 DHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEV-LRINYKFLMSPIKTEQRQ--PSMM 108
Query: 124 TDRINEKGVQYYRNLINEVLSK-NI---QPMVTLNH--YDL-PQP---LQEFGGWANPVV 173
T E+ + Y + N+V +K N+ QP + L +L P + G V
Sbjct: 109 TRMYIEQRDRLYND--NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV 166
Query: 174 ADYFESFADVAFKT-FGDKVPYWITI---NEP---LDVMGGYGYKSGAPYLNLSGLGGDY 226
A + + K+ +W+ + N P L+++ Y+ + + S +
Sbjct: 167 A--LDVCLSYKVQCKMDFKI-FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223
Query: 227 LVAHNLLRAHAKAYRLYEKKYK-SLQKGKVSITLD-------------SC---------- 262
+ + ++A + L K Y+ L + L SC
Sbjct: 224 KLRIHSIQAELRRL-LKSKPYENCL------LVLLNVQNAKAWNAFNLSCKILLTTRFKQ 276
Query: 263 --NYYPHNATSKEDQEAAERVF--QFTLGLFAHPIYSEAGDYPPIVRQIVDQN------- 311
++ T+ + L + D P +++ N
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR---EVLTTNPRRLSII 333
Query: 312 --SAKEGRARS-RLPRFTEEEI-KALKGSFDFFALN------HYTSILIANNNHTSNAPP 361
S ++G A +++ ++ S + L + + +
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLN--VLEPAEYRKMFDRLSV----------- 380
Query: 362 STINDRAATFSQDPNWPSSNSPWLKVVPDGFRALLNWIKKEYNNPPVFITE-NGFSDDGR 420
F + P+ ++ +L+ W ++ V + + + +S +
Sbjct: 381 ---------FPPSAHIPT------ILL-----SLI-WFDVIKSDVMVVVNKLHKYSLVEK 419
Query: 421 LDDEGRIDYYAFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLY 480
E I + + ++ E +R+++D T
Sbjct: 420 QPKESTISIPSIYL--------------ELKVKLENEYALHRSIVDHY-----NIPKTFD 460
Query: 481 HWDLPQPLQDFGGWTNAIIADYFETYADFAYKTFGDKKYLTAMQKALVNDKCNIIGYTAW 540
DL P D YF ++ + +L ++ ++ +
Sbjct: 461 SDDLIPPYLD----------QYFYSH--IGH-------HLKNIEHPERMTLFRMV-F--- 497
Query: 541 SILDNFEWLDGYTCRFGIVHVDFSSSFDYFG-LNHYTSFLVSKKTEPSPE 589
LD F +L+ S + L Y ++ +P E
Sbjct: 498 --LD-FRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYIC--DNDPKYE 542
Score = 55.2 bits (132), Expect = 1e-07
Identities = 88/616 (14%), Positives = 172/616 (27%), Gaps = 159/616 (25%)
Query: 304 VRQIVDQNSAKEGRAR----------SRLPRFTEEEIKALKGSFDFFALNHYTSILIANN 353
+ I+ A G R + +F EE L+ ++ F + I
Sbjct: 51 IDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEE---VLRINYKFL----MSPI----- 98
Query: 354 NHTSNAPPSTINDRAATFSQDPNWPSSNSPWLK--VV-PDGFRALLNWIKKEYNNPPVFI 410
T PS + +D + + N + K V + L + + V I
Sbjct: 99 -KTEQRQPSMMTRMYIE-QRDRLY-NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI 155
Query: 411 TENGFSDDGR-------LDDEGRIDYYAFQVYRFSLSWSRILPTGDIDKINEKGVQYYRN 463
+G G+ F+++ W L + +
Sbjct: 156 --DGVLGSGKTWVALDVCLSYKVQCKMDFKIF-----W---LNLKNCNS----------- 194
Query: 464 LIDELLLNNIQPMVTLYHWDLPQPLQDFGGWTNAIIADYFETYADFAYKTFGDKKYLTAM 523
E +L +Q L + + ++ I + + K Y +
Sbjct: 195 --PETVLEMLQ---KLLY-QIDPNWTSRSDHSSNIKLR-IHSIQAELRRLLKSKPYENCL 247
Query: 524 QKALVNDKCNIIGYTAWS--ILDNFEWLDGYTCRFGIVHVDFSSSFDYFGLNHYTSFLVS 581
LV N+ + + F +C+ ++ F D+ T +
Sbjct: 248 ---LVLL--NV-----QNAKAWNAFN----LSCKI-LLTTRFKQVTDFLSAATTTHISLD 292
Query: 582 KKTEP-SPEPSFRNDANVVLSDDRKWP----KGASFWLKVVPDGFRALL----NWIKKEY 632
+ +P+ + + P L ++ + R L NW K
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW--KHV 350
Query: 633 NNPPVFITENGFSDDGQLDDQGRVDFYQGLSVSFPCFWFMVNVPFFVPSHYVPSGKGENI 692
N + + L+ + LSV F + +P+ I
Sbjct: 351 NCDKLTTIIESSLN--VLEPAEYRKMFDRLSV------FPPSAH-------IPTILLSLI 395
Query: 693 WDRLVHTNPAAVVDK--QNGDVACD------SYH----KYKEDVAIIKDL------GFQV 734
W ++ ++ VV+K + V S + K + L + +
Sbjct: 396 WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNI 455
Query: 735 YRFSLSWSRILPTGD----------IDKIN--EKGVQYYRNLID-ELLLNNIQPMVKLWI 781
+ S I P D + I E+ + +D L I+ W
Sbjct: 456 PKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWN 515
Query: 782 TIKETLEAMQGYDFKTYAPYLS--------MTGVGGEYL--AAHNLLRS-HAKAYRL--- 827
L +Q K Y PY+ + ++L NL+ S + R+
Sbjct: 516 ASGSILNTLQ--QLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALM 573
Query: 828 ------YEKKYKPSQK 837
+E+ +K Q+
Sbjct: 574 AEDEAIFEEAHKQVQR 589
Score = 40.2 bits (93), Expect = 0.003
Identities = 54/401 (13%), Positives = 107/401 (26%), Gaps = 142/401 (35%)
Query: 560 HVDFSSS-FDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLSDDRKWPKGASFWLKVVP 618
H+DF + Y Y L E +F ++ + K V
Sbjct: 6 HMDFETGEHQY----QYKDIL------SVFEDAFVDNFDC----------------KDVQ 39
Query: 619 DGFRALLNWIKKEYNNPPVFITENGFSDDGQLDDQGRVDFYQGLSVSFPCFWFMVNVPFF 678
D +++L+ K+E ++ I + D FW +++
Sbjct: 40 DMPKSILS--KEEIDH----IIMSK-------DAVSGTLRL---------FWTLLS---- 73
Query: 679 VPSHYVPSGKGENIWDRLVHTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYRFS 738
K E + + V V + N Y+F
Sbjct: 74 ---------KQEEMVQKFVEE-----VLRIN-------------------------YKFL 94
Query: 739 LSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVKLWITIKETLEAMQG--YDFK 796
S I + + R+ L N+ Q K ++ + ++ + +
Sbjct: 95 --MSPIKTEQRQPSMMTRMYIEQRDR----LYNDNQVFAKYNVSRLQPYLKLRQALLELR 148
Query: 797 TYAPYLS---MTGVGGEYLAAHNLLRSHAKAYRLYEKKY-----KPSQKGKVALTLNTHF 848
A + + G G ++A ++ S+ ++ K + + V L
Sbjct: 149 P-AKNVLIDGVLGSGKTWVAL-DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK-L 205
Query: 849 NYPLDPSSKEDQEAAERYIQ-------FKFGLFAHPIYSQA----GD--YPPIV------ 889
Y +DP+ + + L Y +
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS 265
Query: 890 ---------RQIVDQNSAKEGRARS---RLPRFTEEEIKAL 918
+Q+ D SA S T +E+K+L
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306
Score = 36.4 bits (83), Expect = 0.065
Identities = 39/270 (14%), Positives = 80/270 (29%), Gaps = 66/270 (24%)
Query: 46 CSTAAFQVEGAWNEDGKGENIWDHLVHTQPDLVKDRQNADVAC---DSYHKYKEDVALIR 102
+T ++ G WD+ H D + + + Y K + +++
Sbjct: 323 LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP 382
Query: 103 D---IGFQVYRFSLSWSRILPTGDTDRINE-----------KGVQYYRNLINEVLSKNIQ 148
I + SL W ++ + +N+ K I L ++
Sbjct: 383 PSAHIPTIL--LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE 440
Query: 149 PMVTL-----NHYDLPQ--------PLQEFGGWANPVV--------ADYFESFA----DV 183
L +HY++P+ P + + + + F D
Sbjct: 441 NEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDF 500
Query: 184 AF---KTFGDKVPYWITINEPLDVMG------GYGYKSGAPYLNLSGLGGDYL--VAHNL 232
F K D W L+ + Y + Y L D+L + NL
Sbjct: 501 RFLEQKIRHDSTA-WNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENL 559
Query: 233 LRA-HAKAYRL---------YEKKYKSLQK 252
+ + + R+ +E+ +K +Q+
Sbjct: 560 ICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
Score = 34.1 bits (77), Expect = 0.32
Identities = 89/612 (14%), Positives = 165/612 (26%), Gaps = 196/612 (32%)
Query: 480 YHWDLPQPLQDFGGWTNAIIADYFETY-ADFAYKTFGD--KKYLTAMQ-KALVNDKCNII 535
+H D + I++ + + + +F K D K L+ + ++ K +
Sbjct: 5 HHMDFETGEHQYQ--YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVS 62
Query: 536 G--YTAWSILDNFEWLDGYTCRFGIVHVDFSSSFDYFGLNHYTSFLVSK-KTE---PS-P 588
G W++L E + +F V+ +Y FL+S KTE PS
Sbjct: 63 GTLRLFWTLLSKQE--EMVQ-KF----VEEVLRINY-------KFLMSPIKTEQRQPSMM 108
Query: 589 EPSFRNDANVVLSDDRKWPKGASFWLKVV-PDGFRALLNWIKKEYNNPPVFITENGFSDD 647
+ + + +D++ + K V + L + + V I +G
Sbjct: 109 TRMYIEQRDRLYNDNQVFAK-----YNVSRLQPYLKLRQALLELRPAKNVLI--DGVLGS 161
Query: 648 GQ-------LDDQGRVDFYQGLSVSFPCFWFMVNVPFFVPSHYVPSGKGENIWDRLVHTN 700
G+ F FW +N+ + L
Sbjct: 162 GKTWVALDVCLSYKVQCKM-----DFKIFW--LNL-----------KNCNSPETVLEMLQ 203
Query: 701 PAAVVDKQNGDVACDSYHKYKEDVAIIKD-----LGFQVYRFSL-----SWS-------- 742
N D K + I+ L + Y L +
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN 263
Query: 743 ---RILPT----GDIDKINEKGVQYYRNLID-----------ELLLN------------- 771
+IL T D ++ + L LLL
Sbjct: 264 LSCKILLTTRFKQVTDFLSAATTTHIS-LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV 322
Query: 772 -NIQPMV------------------------KLWITIKETLEAMQGYDFKTYAPYLSM-- 804
P KL I+ +L ++ +++ LS+
Sbjct: 323 LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP 382
Query: 805 ------TGV------GGEY---------LAAHNLLRSHAK--AYRLYE--KKYKPSQKGK 839
T + L ++L+ K + + K + +
Sbjct: 383 PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENE 442
Query: 840 VAL--TLNTHFNYPLD-PSSKEDQEAAERYIQFKFGLFAHPIYSQAGDYPPIVRQI-VDQ 895
AL ++ H+N P S ++Y G H + + + R + +D
Sbjct: 443 YALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH--HLKNIEHPERMTLFRMVFLDF 500
Query: 896 NSAKEGRARSRLPRFTEEEIKA------LKGKTEEEINALKGKQKYLTALSKAIGEDKCN 949
RF E++I+ G + LK + Y+ D
Sbjct: 501 -------------RFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYIC--------DNDP 539
Query: 950 KYLTALSKAIGE 961
KY L AI +
Sbjct: 540 KY-ERLVNAILD 550
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel,
hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga
maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A
3azs_A* 3azr_A* 3azt_A*
Length = 317
Score = 43.0 bits (101), Expect = 4e-04
Identities = 20/118 (16%), Positives = 46/118 (38%), Gaps = 5/118 (4%)
Query: 95 KEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLN 154
E +I++ GF R + WS +I ++ + +IN L + + ++ ++
Sbjct: 36 DEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIH 95
Query: 155 HYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGGYGYKS 212
HY+ L ++ AD +K + + + + I +N P + +
Sbjct: 96 HYE---ELMNDPEEHKERFLALWKQIAD-RYKDYPETLFFEI-LNAPHGNLTPEKWNE 148
Score = 35.3 bits (81), Expect = 0.082
Identities = 13/57 (22%), Positives = 23/57 (40%)
Query: 721 KEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMV 777
E IIK+ GF R + WS KI ++ + +I+ L + ++
Sbjct: 36 DEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVI 92
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding;
2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Length = 376
Score = 42.4 bits (99), Expect = 6e-04
Identities = 19/113 (16%), Positives = 44/113 (38%), Gaps = 2/113 (1%)
Query: 95 KEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLN 154
++ ++ D F V+R +WS +I+EK ++ +++ ++ L+
Sbjct: 65 EDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNLH 124
Query: 155 HYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDVMGG 207
H E A ++ + A+ FK + + + + +NEP
Sbjct: 125 HETWNHAFSETLDTAKEILEKIWSQIAE-EFKDYDEHLIFEG-LNEPRKNDTP 175
Score = 32.4 bits (73), Expect = 0.79
Identities = 12/57 (21%), Positives = 25/57 (43%)
Query: 721 KEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMV 777
++ ++ D F V+R +WS KI+EK ++ ++D N ++
Sbjct: 65 EDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVIL 121
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A
{Paenibacillus pabuli} PDB: 2jeq_A*
Length = 395
Score = 42.1 bits (98), Expect = 8e-04
Identities = 17/131 (12%), Positives = 45/131 (34%), Gaps = 7/131 (5%)
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTL 153
E + ++ GF+ R +S+ + + IN + + +++ ++ + ++ +
Sbjct: 71 TPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVIINI 130
Query: 154 NHYDLPQPLQEFGGWANPVVADYFESFADV------AFKTFGDKVPYWITINEPLDVMGG 207
+ + E + V F + D++ + +NE D G
Sbjct: 131 HGDGYNSVQGGWLLVNGGNQTAIKEKYKKVWQQIATKFSNYNDRLIFES-MNEVFDGNYG 189
Query: 208 YGYKSGAPYLN 218
+ LN
Sbjct: 190 NPNSAYYTNLN 200
Score = 32.8 bits (74), Expect = 0.53
Identities = 9/58 (15%), Positives = 23/58 (39%)
Query: 720 YKEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMV 777
E + +K GF+ R +S+ + + IN + + ++D + ++
Sbjct: 71 TPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVII 128
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM
glucanase, carbohydrate metabolism, cellulose
degradation, glycosidase; HET: BTB; 2.10A {Clostridium
cellulovorans}
Length = 515
Score = 41.0 bits (95), Expect = 0.002
Identities = 24/123 (19%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Query: 95 KEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLN 154
+ I++ GF R ++W + I++ ++ + N ++ ++ L+
Sbjct: 48 HAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLH 107
Query: 155 HYDLPQPLQEFGGWANPVVADYFESFADVA--FKTFGDKVPYWITINEPLDVMGGYGYKS 212
H + + L+ F V A + + +A FK +GD + + T+NEP V +
Sbjct: 108 HEN--EWLKPFYANEAQVKAQLTKVWTQIANNFKKYGDHL-IFETMNEPRPVGASLQWTG 164
Query: 213 GAP 215
G+
Sbjct: 165 GSY 167
Score = 32.5 bits (73), Expect = 0.81
Identities = 8/57 (14%), Positives = 23/57 (40%)
Query: 721 KEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMV 777
+ IK+ GF R ++W + I++ ++ + + N++ ++
Sbjct: 48 HAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVII 104
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote
structure initiative, joint center for structural
genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Length = 341
Score = 40.7 bits (95), Expect = 0.002
Identities = 19/122 (15%), Positives = 35/122 (28%), Gaps = 7/122 (5%)
Query: 95 KEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLN 154
+ED + F R + G+ I E + +I I ++L+
Sbjct: 39 EEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLH 98
Query: 155 HYDLPQPLQEFGG----WANPVVADYFESF-ADVA--FKTFGDKVPYWITINEPLDVMGG 207
+E W + + F + +A +K + INEP
Sbjct: 99 RAPGYSVNKEVEEKTNLWKDETAQEAFIHHWSFIARRYKGISSTHLSFNLINEPPFPDPQ 158
Query: 208 YG 209
Sbjct: 159 IM 160
Score = 33.4 bits (76), Expect = 0.31
Identities = 9/57 (15%), Positives = 16/57 (28%)
Query: 721 KEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMV 777
+ED + F R + G+ I E + +I I +
Sbjct: 39 EEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICI 95
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D
glucanase, hydrolase; HET: CT3; 2.08A {Clostridium
cellulovorans} PDB: 3ndy_A*
Length = 345
Score = 40.0 bits (93), Expect = 0.003
Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 19/130 (14%)
Query: 95 KEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLN 154
+ I++ GF R ++W + I++ ++ + N ++ ++ L+
Sbjct: 45 HAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLH 104
Query: 155 HYDLPQPLQEFGGWANPVVADYFES---FADV------AFKTFGDKVPYWITINEPLDVM 205
H W P A+ + V FK +GD + + +NEP V
Sbjct: 105 HE---------NEWLKPFYANEAQVKAQLTKVWTQIANNFKKYGDHLIFET-MNEPRPVG 154
Query: 206 GGYGYKSGAP 215
+ G+
Sbjct: 155 ASLQWTGGSY 164
Score = 33.1 bits (75), Expect = 0.39
Identities = 8/57 (14%), Positives = 23/57 (40%)
Query: 721 KEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMV 777
+ IK+ GF R ++W + I++ ++ + + N++ ++
Sbjct: 45 HAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVII 101
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea
jecorina}
Length = 340
Score = 37.3 bits (86), Expect = 0.018
Identities = 19/113 (16%), Positives = 45/113 (39%), Gaps = 6/113 (5%)
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTL 153
+ + + G ++R + W ++ ++ + Y L+ LS +V +
Sbjct: 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDI 104
Query: 154 NHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGD--KVPYWITINEPLDV 204
++Y + G P A + ++ +A + +V ++ +NEP DV
Sbjct: 105 HNYA--RWNGGIIGQGGPTNAQFTSLWSQLA-SKYASQSRV-WFGIMNEPHDV 153
Score = 32.3 bits (73), Expect = 0.86
Identities = 6/54 (11%), Positives = 18/54 (33%)
Query: 720 YKEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNI 773
+ + + G ++R + W ++ ++ + Y L+ L
Sbjct: 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGA 98
Score = 31.5 bits (71), Expect = 1.2
Identities = 29/237 (12%), Positives = 57/237 (24%), Gaps = 35/237 (14%)
Query: 427 IDYYA---FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWD 483
+ ++R + W ++ ++ + Y L+ L +V + H
Sbjct: 49 QHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDI-HNY 107
Query: 484 LPQPLQDFGGWTNAIIADYFETYADFAY------KTFGDKKYLTAMQKALVNDKCNIIGY 537
W II T A F + + + N
Sbjct: 108 --------ARWNGGIIGQGGPTNAQFTSLWSQLASKYASQSR-------VWFGIMNEPHD 152
Query: 538 TAWSILD--NFEWLDGYTCRFGIVHVDFSSSFDYFGLNHYTSFLVSKKTEPSPEPSFRND 595
+ E + D+ + S + P
Sbjct: 153 VNINTWAATVQEVVTAIRNAGATSQFISLPGNDWQSAGAFISDGSAAALSQVTNPDGSTT 212
Query: 596 ANVVLS-----DDRKWPKGASFWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSDD 647
N++ D A + F L W+++ NN +TE G +
Sbjct: 213 -NLIFDVHKYLDSDNSGTHAECTTNNIDGAFSPLATWLRQ--NNRQAILTETGGGNV 266
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5,
subtype, thermophilic, thermophIle, endoglucanase; 1.12A
{Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Length = 305
Score = 37.3 bits (86), Expect = 0.022
Identities = 5/57 (8%), Positives = 17/57 (29%)
Query: 721 KEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMV 777
+ + G ++R R++P + + ++ + +V
Sbjct: 34 PNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVV 90
Score = 36.1 bits (83), Expect = 0.039
Identities = 29/258 (11%), Positives = 66/258 (25%), Gaps = 36/258 (13%)
Query: 427 IDYYA---FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWD 483
ID ++R R++P + + ++ + +V H
Sbjct: 37 IDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVVD-PHNY 95
Query: 484 LPQPLQDFGGWTNAIIADYFETYADFAYKTFGDKKYLTAMQKALVNDKCNIIGYTAWSIL 543
+ + + +++T A F + D N +++
Sbjct: 96 --GRYYNSIISSPSDFETFWKTVA----SQFASNPLVIF-------DTDNEYHDMDQTLV 142
Query: 544 DNF--EWLDGYTCRFGIVHVDFSSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDANVVLS 601
N +DG F + G +T+ + K+ P ++
Sbjct: 143 LNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWTWTNVNDNMKSLTDP------SDKIIYE 196
Query: 602 ------DDRKWPKGASFWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSDDGQLDD--Q 653
D + + + W++ N I E D +
Sbjct: 197 MHQYLDSDGSGTSATCVSSTIGQERITSATQWLRA--NGKKGIIGEFAGGADNVCETAIT 254
Query: 654 GRVDFYQGLSVS-FPCFW 670
G +D+ + W
Sbjct: 255 GMLDYMAQNTDVWTGAIW 272
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase;
1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Length = 320
Score = 36.8 bits (85), Expect = 0.029
Identities = 21/124 (16%), Positives = 49/124 (39%), Gaps = 17/124 (13%)
Query: 95 KEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLN 154
E +I++ GF R + WS + I++ + +++++ L ++ ++ +
Sbjct: 44 DEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCH 103
Query: 155 HYDLPQPLQEFGGWANPVVADYFESFADV------AFKTFGDKVPYWITINEPLDVMGGY 208
H++ + P Y ++ AFK + DK+ + I NEP +
Sbjct: 104 HFE--------ELYQAP--DKYGPVLVEIWKQVAQAFKDYPDKLFFEI-FNEPAQNLTPT 152
Query: 209 GYKS 212
+
Sbjct: 153 KWNE 156
Score = 30.6 bits (69), Expect = 2.2
Identities = 13/57 (22%), Positives = 28/57 (49%)
Query: 721 KEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMV 777
E IIK+ GF R + WS + +I++ + ++++D L N++ ++
Sbjct: 44 DEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVII 100
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of
glycosyl hydrol cellulose degradation; 1.60A
{Clostridium cellulolyticum} SCOP: c.1.8.3
Length = 380
Score = 35.9 bits (82), Expect = 0.061
Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 5/110 (4%)
Query: 95 KEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLN 154
K+ + I+ GF R +SW + G +I++ + + ++N + + ++ +
Sbjct: 64 KQMIDAIKQKGFNTVRIPVSWHPHVS-GSDYKISDVWMNRVQEVVNYCIDNKMYVILNTH 122
Query: 155 HYDLPQPLQEFGGWANPVVADYFESF-ADVA--FKTFGDKVPYWITINEP 201
H Y S A +A F + + + + +NEP
Sbjct: 123 HDVDKVKGYFPSSQYMASSKKYITSVWAQIAARFANYDEHLIFEG-MNEP 171
Score = 32.0 bits (72), Expect = 1.0
Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 721 KEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMV 777
K+ + IK GF R +SW + D KI++ + + +++ + N + ++
Sbjct: 64 KQMIDAIKQKGFNTVRIPVSWHPHVSGSDY-KISDVWMNRVQEVVNYCIDNKMYVIL 119
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 33.4 bits (75), Expect = 0.14
Identities = 9/44 (20%), Positives = 15/44 (34%), Gaps = 17/44 (38%)
Query: 327 EEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAAT 370
++ +K L+ S +A +AP I AT
Sbjct: 19 KQALKKLQASLKLYA--------------DDSAPALAIK---AT 45
Score = 30.7 bits (68), Expect = 1.1
Identities = 6/17 (35%), Positives = 9/17 (52%), Gaps = 1/17 (5%)
Query: 784 KETLEAMQGYDFKTYAP 800
K+ L+ +Q K YA
Sbjct: 19 KQALKKLQA-SLKLYAD 34
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase,
glycosyl hydrolase family 5, mixed alpha-beta, TIM
barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB:
3vdh_A*
Length = 353
Score = 34.7 bits (79), Expect = 0.15
Identities = 19/151 (12%), Positives = 45/151 (29%), Gaps = 18/151 (11%)
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTL 153
++ + + GF R ++W + ++E + + ++ ++ + +V +
Sbjct: 54 TQDMMTFLMQNGFNAVRIPVTWYEHMD--AEGNVDEAWMMRVKAIVEYAMNAGLYAIVNV 111
Query: 154 NHYDLPQPLQEFGGWANPVVADYFESFADVA---------FKTFGDKVPYWITINEPLDV 204
H+D G W Y + + + + NE LD
Sbjct: 112 -HHD---TAAGSGAWIKADTDVYAATKEKFKKLWTQIANALADYDQHLLFEG-YNEMLD- 165
Query: 205 MGGYGYKSGAPYLNLSGLGGDYLVAHNLLRA 235
G + L + +RA
Sbjct: 166 -GNNSWDEPQKASGYEALNNYAQDFVDAVRA 195
Score = 33.6 bits (76), Expect = 0.35
Identities = 29/240 (12%), Positives = 72/240 (30%), Gaps = 20/240 (8%)
Query: 427 IDYYA---FQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMVTLYHWD 483
+ + F R ++W + ++E + + +++ + + +V + H D
Sbjct: 58 MTFLMQNGFNAVRIPVTWYEHMDAEG--NVDEAWMMRVKAIVEYAMNAGLYAIVNV-HHD 114
Query: 484 LPQPLQDFGGWTNAIIADYFETYADFAYKTFGDKKYLTAMQKALVNDKCN--IIGYTAW- 540
G W A Y T F L + L+ + N + G +W
Sbjct: 115 ---TAAGSGAWIKADTDVYAATKEKFKKLWTQIANALADYDQHLLFEGYNEMLDGNNSWD 171
Query: 541 ---SILDNFEWLDGYTCRFGIVH-VDFSSSFDYFGLNHYTSFLVSKKTEPSPEPSFRNDA 596
+ V +++ +N Y + P+ +
Sbjct: 172 EPQKASGYEALNNYAQDFVDAVRATGGNNATRNLIVNTYAAAKGENVLNNFMLPTDAVNN 231
Query: 597 NVVLS----DDRKWPKGASFWLKVVPDGFRALLNWIKKEYNNPPVFITENGFSDDGQLDD 652
++++ D + + W + + + + K++ P I E G + +
Sbjct: 232 HLIVQVHSYDPWNFFNTKTTWDSECHNTLTEIFSALSKKFTTIPYIIGEYGTHGESDISV 291
Score = 31.2 bits (70), Expect = 1.7
Identities = 13/117 (11%), Positives = 30/117 (25%), Gaps = 16/117 (13%)
Query: 343 NHYTSILIANNNHTSNAPPSTINDRAATFSQDPNW------------PSSNSPWLKVVPD 390
N+ T LI N + N T + + + ++ + W +
Sbjct: 199 NNATRNLIVNTYAAAKGENVLNNFMLPTDAVNNHLIVQVHSYDPWNFFNTKTTWDSECHN 258
Query: 391 GFRALLNWIKKEYNNPPVFITE----NGFSDDGRLDDEGRIDYYAFQVYRFSLSWSR 443
+ + + K++ P I E A + ++
Sbjct: 259 TLTEIFSALSKKFTTIPYIIGEYGTHGESDISVSKSSPAEKIKLAADQAADMVKLAK 315
Score = 30.1 bits (67), Expect = 3.7
Identities = 6/58 (10%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 720 YKEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMV 777
++ + + GF R ++W + ++E + + +++ + + +V
Sbjct: 54 TQDMMTFLMQNGFNAVRIPVTWYEHMDAE--GNVDEAWMMRVKAIVEYAMNAGLYAIV 109
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET:
SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A*
2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Length = 481
Score = 34.6 bits (78), Expect = 0.19
Identities = 17/111 (15%), Positives = 35/111 (31%), Gaps = 15/111 (13%)
Query: 94 YKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTL 153
+ D+G RF +SW + P +++ + + + + + M+ +
Sbjct: 68 EADLAREYADMGTNFVRFLISWRSVEP--APGVYDQQYLDRVEDRVGWYAERGYKVMLDM 125
Query: 154 NHYDLPQPLQEFGGWANPVVADYFESFADVAFKTFGDKVPYWITINEPLDV 204
H D+ G + G+ P W T + L V
Sbjct: 126 -HQDVYSGAITPEGNSGNGAGAI------------GNGAPAWATYMDGLPV 163
Score = 33.0 bits (74), Expect = 0.50
Identities = 8/58 (13%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Query: 720 YKEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMV 777
+ D+G RF +SW + P +++ + + + + M+
Sbjct: 68 EADLAREYADMGTNFVRFLISWRSVEP--APGVYDQQYLDRVEDRVGWYAERGYKVML 123
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl
hydrolases, cellulose degradation; 1.90A {Clostridium
thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Length = 343
Score = 33.8 bits (77), Expect = 0.27
Identities = 15/113 (13%), Positives = 39/113 (34%), Gaps = 4/113 (3%)
Query: 95 KEDVALIRDIGFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNLINEVLSKNIQPMVTLN 154
++D+ I + GF R + I + E G+ Y + N+ ++ ++
Sbjct: 31 EKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMH 90
Query: 155 HYDLPQPLQEFGG--WANPVVADYFESFADVAFKTFGDK--VPYWITINEPLD 203
H + + +P F K + ++ + +N+ ++
Sbjct: 91 HAPGYRFQDFKTSTLFEDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQVVE 143
Score = 30.7 bits (69), Expect = 2.1
Identities = 10/57 (17%), Positives = 24/57 (42%)
Query: 721 KEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLIDELLLNNIQPMV 777
++D+ I + GF R + I ++ + E G+ Y ++ N+ ++
Sbjct: 31 EKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVL 87
>1iq8_A Archaeosine tRNA-guanine transglycosylase; (alpha/beta)8 barrel,
riken structural genomics/proteomics initiative, RSGI;
2.20A {Pyrococcus horikoshii} SCOP: b.122.1.1 c.1.20.1
d.17.6.1 PDB: 1it7_A* 1it8_A* 1j2b_A
Length = 582
Score = 33.5 bits (77), Expect = 0.43
Identities = 10/68 (14%), Positives = 19/68 (27%), Gaps = 29/68 (42%)
Query: 716 SYHKYK----EDVAIIKDL---------------GFQVYRFSLSWSRILPTGDIDKINEK 756
SY YK A+ + FQ+ G I+ N +
Sbjct: 64 SYIIYKDEELRRKALELGIHRMLDYNGIIEVDSGSFQL--MKY--------GSIEVSNRE 113
Query: 757 GVQYYRNL 764
+++ +
Sbjct: 114 IIEFQHRI 121
Score = 30.8 bits (70), Expect = 2.8
Identities = 5/34 (14%), Positives = 13/34 (38%), Gaps = 10/34 (29%)
Query: 431 AFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNL 464
+FQ+ G I+ N + +++ +
Sbjct: 98 SFQL--MKY--------GSIEVSNREIIEFQHRI 121
Score = 28.9 bits (65), Expect = 9.4
Identities = 4/34 (11%), Positives = 11/34 (32%), Gaps = 10/34 (29%)
Query: 105 GFQVYRFSLSWSRILPTGDTDRINEKGVQYYRNL 138
FQ+ G + N + +++ +
Sbjct: 98 SFQL--MKY--------GSIEVSNREIIEFQHRI 121
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase;
cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A
{Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A*
3qhm_A* 3qhn_A*
Length = 458
Score = 32.9 bits (74), Expect = 0.61
Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 9/70 (12%)
Query: 717 YHKYKEDVAIIKDLGFQVYRFSLSWSRILPTGDIDKIN---------EKGVQYYRNLIDE 767
+++ + IK LGF R + P I+ +Q +I +
Sbjct: 83 KRNWEDMLLQIKSLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKK 142
Query: 768 LLLNNIQPMV 777
I ++
Sbjct: 143 AGDLGIFVLL 152
Score = 32.1 bits (72), Expect = 0.94
Identities = 18/136 (13%), Positives = 43/136 (31%), Gaps = 13/136 (9%)
Query: 91 YHKYKEDVALIRDIGFQVYRFSLSWSRILPTGDTDRIN---------EKGVQYYRNLINE 141
+++ + I+ +GF R + P I+ +Q +I +
Sbjct: 83 KRNWEDMLLQIKSLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKK 142
Query: 142 VLSKNIQPMVTLNHYDLPQPLQEFGGWANPVVADYFESFADVA--FKTFGDKVPYWITIN 199
I ++ H ++ + D+ ++ +VA F + + + + N
Sbjct: 143 AGDLGIFVLLD-YHRIGCTHIEPLWYTEDFSEEDFINTWIEVAKRFGKYWNVIGADL-KN 200
Query: 200 EPLDVMGGYGYKSGAP 215
EP V +
Sbjct: 201 EPHSVTSPPAAYTDGT 216
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI,
protein structure initiative, northeast structural
genomics consortium, NESG; 2.30A {Bacillus subtilis}
SCOP: c.66.1.17
Length = 275
Score = 31.4 bits (72), Expect = 1.4
Identities = 8/48 (16%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFS 564
KK+L ++ L + + ++ + D F + ++ ++ VD +
Sbjct: 116 KKFLPSIAGKLDDPRVDVQ------VDDGFMHIAKSENQYDVIMVDST 157
>2pt6_A Spermidine synthase; transferase, structural genomics consor
SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium
falciparum} PDB: 2pss_A* 2pt9_A*
Length = 321
Score = 30.8 bits (70), Expect = 2.0
Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFS 564
K Y + + + N+ I D ++L+ T + ++ VD S
Sbjct: 157 KIYFKNISCGYEDKRVNVF------IEDASKFLENVTNTYDVIIVDSS 198
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET:
AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A*
3b7p_A* 3rie_A* 2pwp_A*
Length = 283
Score = 30.7 bits (70), Expect = 2.1
Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFS 564
K Y + + + N+ I D ++L+ T + ++ VD S
Sbjct: 119 KIYFKNISCGYEDKRVNVF------IEDASKFLENVTNTYDVIIVDSS 160
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis
elegans} SCOP: c.66.1.17
Length = 314
Score = 30.4 bits (69), Expect = 2.5
Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFS 564
KK+L M + K ++ D FE+L + F ++ D S
Sbjct: 149 KKFLPGMSCGFSHPKLDLF------CGDGFEFLKNHKNEFDVIITDSS 190
>2dn0_A Zinc fingers and homeoboxes protein 3; triple homeobox 1 protein,
KIAA0395, TIX1, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 76
Score = 28.2 bits (63), Expect = 2.5
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Query: 312 SAKEGRARSRLPRFTEEEIKALKGSFDFFALNHY 345
S+ A + + E++ ALKGS F N +
Sbjct: 2 SSGSSGASIYKNKKSHEQLSALKGS---FCRNQF 32
>3bld_A Queuine tRNA-ribosyltransferase; TGT, PREQ1, glycosyltransferase,
metal-binding, queuosine biosynthesis, tRNA processing;
HET: PRF; 1.19A {Zymomonas mobilis} PDB: 3bl3_A* 1ozq_A*
1ozm_A* 1r5y_A* 1enu_A* 1f3e_A* 1k4h_A* 1n2v_A* 1p0b_A*
1p0d_A 1p0e_A* 1pud_A 1q2r_A* 1q2s_A* 1q4w_A* 1q63_A*
1q65_A* 1q66_A* 1k4g_A* 1s38_A* ...
Length = 386
Score = 30.6 bits (70), Expect = 3.0
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 11/36 (30%)
Query: 731 GFQVYRFSLSWSRILPTGDIDKINEKGVQYYRNLID 766
GFQV SLS + K +E+GV +++ +D
Sbjct: 105 GFQV--MSLS--------SLTKQSEEGV-TFKSHLD 129
>2obd_A Cholesteryl ester transfer protein; lipid transfer protein, lipid
transport; HET: NDG FU4 2OB PCW EPE 1PE PG4; 2.10A {Homo
sapiens}
Length = 476
Score = 30.6 bits (68), Expect = 3.3
Identities = 18/148 (12%), Positives = 36/148 (24%), Gaps = 15/148 (10%)
Query: 126 RINEKGVQYYRNLINEVLSKNIQPMVTLNHYDLPQPLQEFGGWA----NPVVADYFESFA 181
RI + + + +V+ Q + + + G N ++ S A
Sbjct: 14 RITKPALLVLNHETAKVIQTAFQRA-SYPDITGEKAMMLLGQVKYGLHNIQISHL--SIA 70
Query: 182 DVAFKTFGDKVPYWITINEPLDVMGGYGYKSGAPYLNLSGLGGDYLVAHNLLRAHAKAYR 241
+ K + + G Y + D+ + A
Sbjct: 71 SSQVELVEAKSIDVSIQDVSVVFKGTLKYGYTTAWWLGIDQSIDFEI--------DSAID 122
Query: 242 LYEKKYKSLQKGKVSITLDSCNYYPHNA 269
L + G+V C H
Sbjct: 123 LQINTQLTADSGRVRTDAPDCYLSFHKL 150
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel
beta sheet with flanking helices, structural genomics,
PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5
PDB: 2oz5_A*
Length = 296
Score = 29.5 bits (65), Expect = 4.6
Identities = 15/92 (16%), Positives = 25/92 (27%), Gaps = 8/92 (8%)
Query: 327 EEEIKALKGSFDFFALNHYTSILIANNNHTSNAPPSTINDRAATFSQDPNWPSSNSPWLK 386
+ I A D+ N L A S + A + L
Sbjct: 202 RDVIVA-----DYLRSNDSVPQLRA---RISEMIQQRFDTELAPEVVTFTKARLSDGVLG 253
Query: 387 VVPDGFRALLNWIKKEYNNPPVFITENGFSDD 418
V + A I + Y + ++ + G S
Sbjct: 254 VRAEYLAAARQTIDETYGSLGGYLRDAGISQA 285
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 29.2 bits (65), Expect = 5.2
Identities = 14/57 (24%), Positives = 19/57 (33%), Gaps = 9/57 (15%)
Query: 688 KGENIWDRLV-----HTNPAAVVDKQNGDVACDSYHKYKEDVAIIKDLGFQVYR-FS 738
+G N+ L P V GDV C D + D + +R FS
Sbjct: 14 RGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLSDKLV--DTRSE-WRTFS 67
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A
{Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A*
1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A*
1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A*
2ga2_A* 2oaz_A*
Length = 478
Score = 29.9 bits (67), Expect = 5.3
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 883 GDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKTEEEINALK 930
G +P Q + ++GR + R T EE KAL +EE N +
Sbjct: 127 GVFP--KGQECEYPPTQDGRTAAW--RTTSEEKKALDQASEEIWNDFR 170
>3ayf_A Nitric oxide reductase; oxidoreductase; HET: HEM BOG EPE LOP; 2.50A
{Geobacillus stearothermophilus} PDB: 3ayg_A*
Length = 800
Score = 29.6 bits (66), Expect = 6.3
Identities = 12/70 (17%), Positives = 26/70 (37%), Gaps = 13/70 (18%)
Query: 281 VFQFT-LGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDF 339
+ T L + + I+ E P +++ ++ T+E I + F
Sbjct: 31 LISSTVLLVGGYWIFKEM---APRPKEVRSESGE---------VLMTKETIIGGQAVFQK 78
Query: 340 FALNHYTSIL 349
+ L Y ++L
Sbjct: 79 YGLMDYGTVL 88
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural
genomics, PSI, protein structure initiative; 1.50A
{Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Length = 296
Score = 29.2 bits (66), Expect = 6.3
Identities = 8/48 (16%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Query: 517 KKYLTAMQKALVNDKCNIIGYTAWSILDNFEWLDGYTCRFGIVHVDFS 564
+KYL + + I+ I + E++ + F ++ +D +
Sbjct: 131 RKYLKQTSCGFDDPRAEIV------IANGAEYVRKFKNEFDVIIIDST 172
>2ebi_A DNA binding protein GT-1; DNA-binding domain, phosphorylation; HET:
DNA; NMR {Arabidopsis thaliana} PDB: 2jmw_A*
Length = 86
Score = 27.1 bits (60), Expect = 8.4
Identities = 7/50 (14%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 904 RSRLPRFTEEEIKAL---KGKTEEEINALKGKQKYLTALSKAIGEDKCNK 950
+ R + ++E ++L + + N K + +S + E ++
Sbjct: 1 KKRAETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDR 50
>3or8_A Transcription elongation factor SPT6; SH2, CTD binding; HET: MES;
1.60A {Candida glabrata} PDB: 3pjp_A* 3psj_A* 3psk_A
2l3t_A 3gxw_A 3gxx_A
Length = 197
Score = 28.3 bits (63), Expect = 8.8
Identities = 7/44 (15%), Positives = 12/44 (27%), Gaps = 14/44 (31%)
Query: 378 PSSNSP----WLKVVPDGFR----------ALLNWIKKEYNNPP 407
++ S +K+ GF L N K +
Sbjct: 151 LNAESKLYIWNVKLTHTGFFLVNYNYPTVIQLCNGFKTLLKSSN 194
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus
cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Length = 358
Score = 28.8 bits (64), Expect = 9.0
Identities = 9/78 (11%), Positives = 24/78 (30%), Gaps = 10/78 (12%)
Query: 90 SYHKYKEDVALIRDIGFQVYRFSLSWSRILPT----------GDTDRINEKGVQYYRNLI 139
Y+ + I+ +G+ R S + P + D +Q ++
Sbjct: 42 WSRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIV 101
Query: 140 NEVLSKNIQPMVTLNHYD 157
++ ++ + D
Sbjct: 102 AYAGQIGLRIILDRHRPD 119
>2dgj_A Hypothetical protein EBHA; helix-bundle, ROD-like structure,
adhesin, cell adhesion; 2.35A {Staphylococcus aureus}
Length = 257
Score = 28.4 bits (62), Expect = 9.4
Identities = 10/68 (14%), Positives = 21/68 (30%)
Query: 896 NSAKEGRARSRLPRFTEEEIKALKGKTEEEINALKGKQKYLTALSKAIGEDKCNKYLTAL 955
+A+ + ++ ++ AL G + A + A LT L
Sbjct: 164 TAAEGILNKQTGGNTSKADVDNALNAVTRAKAALNGAENLRNAKTSATNTINGLPNLTQL 223
Query: 956 SKAIGEDK 963
K + +
Sbjct: 224 QKDNLKHQ 231
>1pq3_A Arginase II, mitochondrial precursor; biosynthetic protein,
hydrolase; HET: S2C; 2.70A {Homo sapiens} SCOP: c.42.1.1
Length = 306
Score = 28.7 bits (65), Expect = 9.6
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 222 LGGDYLVAHNLLRAHAKAYR 241
LGGD+ +A + HA+
Sbjct: 93 LGGDHSLAIGTISGHARHCP 112
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.319 0.137 0.431
Gapped
Lambda K H
0.267 0.0737 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 16,180,301
Number of extensions: 1023394
Number of successful extensions: 3334
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2784
Number of HSP's successfully gapped: 319
Length of query: 985
Length of database: 6,701,793
Length adjustment: 103
Effective length of query: 882
Effective length of database: 3,825,930
Effective search space: 3374470260
Effective search space used: 3374470260
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (27.6 bits)