BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14903
(241 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 76/115 (66%), Gaps = 3/115 (2%)
Query: 87 ARSRLPRFTEEEIKALK-GKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIY 145
A + R EE K + GK+SI++ + P NA S +D E AER QF G F HP+Y
Sbjct: 201 AHGKAYRLYEEMFKPTQNGKISISISGVFFMPKNAESDDDIETAERANQFERGWFGHPVY 260
Query: 146 SEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSIL 200
GDYPPI+++ VDQ S +EG S+LP+FT++EIK LKG+ DF+ALNHY+S L
Sbjct: 261 K--GDYPPIMKKWVDQKSKEEGLPWSKLPKFTKDEIKLLKGTADFYALNHYSSRL 313
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 59 AHPIYSETGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 104
HP+Y GDYPPI+++ VDQ S +EG S+LP+FT++EIK LKG
Sbjct: 256 GHPVYK--GDYPPIMKKWVDQKSKEEGLPWSKLPKFTKDEIKLLKG 299
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYTI 32
+A+ DKCN+IGYT WS+LDNFEW GY+I
Sbjct: 401 QAMYEDKCNVIGYTVWSLLDNFEWFYGYSI 430
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 4/153 (2%)
Query: 86 RARSRLPRFTEEEIKALKG-KVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPI 144
A +R+ ++E +A +G KV I+L+ N+ S ED+ + E QF LGL+AHPI
Sbjct: 208 HAHARIYHLYDQEFRAEQGGKVGISLNI-NWCEPATNSAEDRASCENYQQFNLGLYAHPI 266
Query: 145 YSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILXXXX 204
++E GDYP +++ V +NSA EG SRLP+FT EE++ ++G+ DF +N YT++L
Sbjct: 267 FTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLGINFYTALL--GK 324
Query: 205 XXXXXXXXXXXXDRAATYSQDPNWPSSNSPWLK 237
D +QD WP S S WLK
Sbjct: 325 SGVEGYEPSRYRDSGVILTQDAAWPISASSWLK 357
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 59 AHPIYSETGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 104
AHPI++E GDYP +++ V +NSA EG SRLP+FT EE++ ++G
Sbjct: 263 AHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRG 308
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
M KA+ D N+IGYTAWS++DNFEWL GY+
Sbjct: 408 MLKAIHEDGVNVIGYTAWSLMDNFEWLRGYS 438
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 4/153 (2%)
Query: 86 RARSRLPRFTEEEIKALKG-KVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPI 144
A +R+ ++E +A +G KV I+L+ N+ S ED+ + E QF LGL+AHPI
Sbjct: 208 HAHARIYHLYDQEFRAEQGGKVGISLNI-NWCEPATNSAEDRASCENYQQFNLGLYAHPI 266
Query: 145 YSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILXXXX 204
++E GDYP +++ V +NSA EG SRLP+FT EE++ ++G+ DF +N YT++L
Sbjct: 267 FTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLGINFYTALL--GK 324
Query: 205 XXXXXXXXXXXXDRAATYSQDPNWPSSNSPWLK 237
D +QD WP S S WLK
Sbjct: 325 SGVEGYEPSRYRDSGVILTQDAAWPISASSWLK 357
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 59 AHPIYSETGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 104
AHPI++E GDYP +++ V +NSA EG SRLP+FT EE++ ++G
Sbjct: 263 AHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRG 308
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
M KA+ D N+IGYTAWS++DNFEWL GY+
Sbjct: 408 MLKAIHEDGVNVIGYTAWSLMDNFEWLRGYS 438
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 4/153 (2%)
Query: 86 RARSRLPRFTEEEIKALKG-KVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPI 144
A +R+ ++E +A +G KV I+L+ N+ S ED+ + E QF LGL+AHPI
Sbjct: 208 HAHARIYHLYDQEFRAEQGGKVGISLNI-NWCEPATNSAEDRASCENYQQFNLGLYAHPI 266
Query: 145 YSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILXXXX 204
++E GDYP +++ V +NSA EG SRLP+FT EE++ ++G+ DF +N YT++L
Sbjct: 267 FTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLGINFYTALL--GK 324
Query: 205 XXXXXXXXXXXXDRAATYSQDPNWPSSNSPWLK 237
D +QD WP S S WLK
Sbjct: 325 SGVEGYEPSRYRDSGVILTQDAAWPISASSWLK 357
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 59 AHPIYSETGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 104
AHPI++E GDYP +++ V +NSA EG SRLP+FT EE++ ++G
Sbjct: 263 AHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRG 308
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
M KA+ D N+IGYTAWS++DNFEWL GY+
Sbjct: 408 MLKAIHEDGVNVIGYTAWSLMDNFEWLRGYS 438
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With 1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 4/153 (2%)
Query: 86 RARSRLPRFTEEEIKALKG-KVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPI 144
A +R+ ++E +A +G KV I+L+ N+ S ED+ + E QF LGL+AHPI
Sbjct: 208 HAHARIYHLYDQEFRAEQGGKVGISLNI-NWCEPATNSAEDRASCENYQQFNLGLYAHPI 266
Query: 145 YSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILXXXX 204
++E GDYP +++ V +NSA EG SRLP+FT EE++ ++G+ DF +N YT++L
Sbjct: 267 FTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLGINFYTALL--GK 324
Query: 205 XXXXXXXXXXXXDRAATYSQDPNWPSSNSPWLK 237
D +QD WP S S WLK
Sbjct: 325 SGVEGYEPSRYRDSGVILTQDAAWPISASSWLK 357
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 59 AHPIYSETGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 104
AHPI++E GDYP +++ V +NSA EG SRLP+FT EE++ ++G
Sbjct: 263 AHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRG 308
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
M KA+ D N+IGYTAWS++DNFEWL GY+
Sbjct: 408 MLKAIHEDGVNVIGYTAWSLMDNFEWLRGYS 438
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 100 KALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIV 159
K KG VS++L + P + S DQEAA+R F L LFA PI+ + GDYP +V+ +
Sbjct: 214 KKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFID-GDYPEVVKSQI 272
Query: 160 DQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSIL 200
S K+G SRLP FTEEE K +KG+ DFFA+ +YT+ L
Sbjct: 273 ASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRL 313
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 59 AHPIYSETGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 104
A PI+ + GDYP +V+ + S K+G SRLP FTEEE K +KG
Sbjct: 255 AKPIFID-GDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKG 299
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYT 31
KA+ DK N+ Y AWS+LDNFEW GY+
Sbjct: 402 KAIQLDKVNLQVYCAWSLLDNFEWNQGYS 430
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 100 KALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIV 159
K KG VS++L + P + S DQEAA+R F L LFA PI+ + GDYP +V+ +
Sbjct: 214 KKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFID-GDYPEVVKSQI 272
Query: 160 DQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSIL 200
S K+G SRLP FTEEE K +KG+ DFFA+ +YT+ L
Sbjct: 273 ASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRL 313
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 59 AHPIYSETGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 104
A PI+ + GDYP +V+ + S K+G SRLP FTEEE K +KG
Sbjct: 255 AKPIFID-GDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKG 299
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYT 31
KA+ DK N+ Y AWS+LDNFEW GY+
Sbjct: 402 KAIQLDKVNLQVYCAWSLLDNFEWNQGYS 430
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 100 KALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIV 159
K KG VS++L + P + S DQEAA+R F L LFA PI+ + GDYP +V+ +
Sbjct: 214 KKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFID-GDYPEVVKSQI 272
Query: 160 DQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSIL 200
S K+G SRLP FTEEE K +KG+ DFFA+ +YT+ L
Sbjct: 273 ASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRL 313
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 59 AHPIYSETGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 104
A PI+ + GDYP +V+ + S K+G SRLP FTEEE K +KG
Sbjct: 255 AKPIFID-GDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKG 299
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYT 31
KA+ DK N+ Y AWS+LDNFEW GY+
Sbjct: 402 KAIQLDKVNLQVYCAWSLLDNFEWNQGYS 430
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 65/115 (56%), Gaps = 14/115 (12%)
Query: 87 ARSRLPRFTEEEIKALKG-KVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIY 145
A + + +E K +G ++ ITLDS P++ T +EA R +F LG FA+PIY
Sbjct: 207 AHAHAVKLYRDEFKEKQGGQIGITLDSHWLIPYDDTDAS-KEATLRAMEFKLGRFANPIY 265
Query: 146 SEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSIL 200
G+YPP +++I+ RLP FT EEI+ +KGS DFF LN YT+ L
Sbjct: 266 K--GEYPPRIKKILG----------DRLPEFTPEEIELVKGSSDFFGLNTYTTHL 308
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYTI 32
+ +A+ D ++ GY WS+LDNFEW +GY +
Sbjct: 401 LLQAVTEDGADVRGYFGWSLLDNFEWAEGYKV 432
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 12/50 (24%)
Query: 55 ISKSAHPIYSETGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKG 104
+ + A+PIY G+YPP +++I+ RLP FT EEI+ +KG
Sbjct: 257 LGRFANPIYK--GEYPPRIKKILG----------DRLPEFTPEEIELVKG 294
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 57/112 (50%), Gaps = 14/112 (12%)
Query: 87 ARSRLPRFTEEEIKALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYS 146
A R + E +K GK+ I L+ YP +A D+EAAER +F FA PIY
Sbjct: 207 AHGRAVKVFRETVK--DGKIGIVLNGDFTYPWDAADPADKEAAERRLEFFTAWFADPIY- 263
Query: 147 EAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS 198
GDYP +R+ + RLP FT EE + GS DF+ +NHYTS
Sbjct: 264 -LGDYPASMRK----------QLGDRLPTFTPEERALVHGSNDFYGMNHYTS 304
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
M A+ D N+ GY WS+LDNFEW +GY+
Sbjct: 402 MVTAVELDGVNVKGYFVWSLLDNFEWAEGYS 432
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
Query: 100 KALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIV 159
+ +G++ I+ + P + S D EAA R F LG F PI S GDYP +++ V
Sbjct: 263 RGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITS--GDYPKSMKKFV 320
Query: 160 DQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS--ILXXXXXXXXXXXXXXXXD 217
SRLP+F+ E+ K LKGS+DF LN+YT+ + D
Sbjct: 321 G----------SRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTD 370
Query: 218 RAATYSQD----PNWPSSNSPWL 236
TY D P P S S WL
Sbjct: 371 IHVTYETDRNGVPIGPQSGSDWL 393
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGYTI 32
+ND N+ GY AWS+LDNFEW +GY +
Sbjct: 457 MNDGVNVKGYFAWSLLDNFEWGEGYGV 483
Score = 30.4 bits (67), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 14/63 (22%)
Query: 54 MISKSAHPIYSETGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKVSITLDSS 113
M+ PI S GDYP +++ V SRLP+F+ E+ K LKG S
Sbjct: 299 MLGWFMEPITS--GDYPKSMKKFVG----------SRLPKFSPEQSKMLKG--SYDFVGL 344
Query: 114 NYY 116
NYY
Sbjct: 345 NYY 347
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 14/113 (12%)
Query: 87 ARSRLPRFTEEEIKAL-KGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIY 145
A + R + + +AL KGK+ ITL S + P + SK + +AA+R F G F P+
Sbjct: 244 AHAETVRLYKAKYQALQKGKIGITLVSHWFVPF-SRSKSNNDAAKRAIDFMFGWFMDPLI 302
Query: 146 SEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS 198
GDYP +R +V +RLP+FT+E+ K +KG+FDF LN+YT+
Sbjct: 303 R--GDYPLSMRGLVG----------NRLPQFTKEQSKLVKGAFDFIGLNYYTA 343
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGYTI 32
+ D N+ GY AWS+LDNFEW +GYT+
Sbjct: 449 IRDGANVKGYFAWSLLDNFEWSNGYTV 475
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 12/53 (22%)
Query: 67 GDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKVSITLDSSNYYPHN 119
GDYP +R +V +RLP+FT+E+ K +KG NYY N
Sbjct: 304 GDYPLSMRGLVG----------NRLPQFTKEQSKLVKGAFDFI--GLNYYTAN 344
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
Length = 513
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
Query: 100 KALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIV 159
+ +G++ I+ + P + S D EAA R F LG F PI S GDYP +++ V
Sbjct: 263 RGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITS--GDYPKSMKKFV 320
Query: 160 DQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS--ILXXXXXXXXXXXXXXXXD 217
SRLP+F+ E+ K LKGS+DF LN+YT+ + D
Sbjct: 321 G----------SRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTD 370
Query: 218 RAATYSQD----PNWPSSNSPWL 236
TY D P P S S WL
Sbjct: 371 IHVTYETDRNGVPIGPQSGSDWL 393
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGYTI 32
+ND N+ GY AWS+LDNFEW +GY +
Sbjct: 457 MNDGVNVKGYFAWSLLDNFEWGEGYGV 483
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 14/63 (22%)
Query: 54 MISKSAHPIYSETGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKVSITLDSS 113
M+ PI S GDYP +++ V SRLP+F+ E+ K LKG S
Sbjct: 299 MLGWFMEPITS--GDYPKSMKKFVG----------SRLPKFSPEQSKMLKG--SYDFVGL 344
Query: 114 NYY 116
NYY
Sbjct: 345 NYY 347
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
Query: 100 KALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIV 159
+ +G++ I+ + P + S D EAA R F LG F PI S GDYP +++ V
Sbjct: 263 RGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITS--GDYPKSMKKFV 320
Query: 160 DQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS--ILXXXXXXXXXXXXXXXXD 217
SRLP+F+ E+ K LKGS+DF LN+YT+ + D
Sbjct: 321 G----------SRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTD 370
Query: 218 RAATYSQD----PNWPSSNSPWL 236
TY D P P S S WL
Sbjct: 371 IHVTYETDRNGVPIGPQSGSDWL 393
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGYTI 32
+ND N+ GY AWS+LDNFEW +GY +
Sbjct: 457 MNDGVNVKGYFAWSLLDNFEWGEGYGV 483
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 14/63 (22%)
Query: 54 MISKSAHPIYSETGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKVSITLDSS 113
M+ PI S GDYP +++ V SRLP+F+ E+ K LKG S
Sbjct: 299 MLGWFMEPITS--GDYPKSMKKFVG----------SRLPKFSPEQSKMLKG--SYDFVGL 344
Query: 114 NYY 116
NYY
Sbjct: 345 NYY 347
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 91 LPRFTEEEIKALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGD 150
+ R+ + A +GKV I LD N+Y + S EDQ AA+R F +G + P+ + G
Sbjct: 228 VARYRTKYQAAQQGKVGIVLDF-NWYEALSNSTEDQAAAQRARDFHIGWYLDPLIN--GH 284
Query: 151 YPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILXXXXXXXXXX 210
YP I++ +V + RLP+FT E+ + +KGS D+ +N YT+
Sbjct: 285 YPQIMQDLV----------KDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQT 334
Query: 211 XXXXXXDRAATY----SQDPNWPSSNSPWL 236
D TY + P P +NS WL
Sbjct: 335 PTSYAADWQVTYVFAKNGKPIGPQANSNWL 364
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYT 31
K +++ N+ GY AWS+LDNFEWL GYT
Sbjct: 423 KKAIDEGANVAGYFAWSLLDNFEWLSGYT 451
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 91 LPRFTEEEIKALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGD 150
+ R+ + A +GKV I LD N+Y + S EDQ AA+R F +G + P+ + G
Sbjct: 228 VARYRTKYQAAQQGKVGIVLDF-NWYEALSNSTEDQAAAQRARDFHIGWYLDPLIN--GH 284
Query: 151 YPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILXXXXXXXXXX 210
YP I++ +V + RLP+FT E+ + +KGS D+ +N YT+
Sbjct: 285 YPQIMQDLV----------KDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQT 334
Query: 211 XXXXXXDRAATY----SQDPNWPSSNSPWL 236
D TY + P P +NS WL
Sbjct: 335 PTSYSADWQVTYVFAKNGKPIGPQANSNWL 364
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYT 31
K +++ N+ GY AWS+LDNFEWL GYT
Sbjct: 423 KKAIDEGANVAGYFAWSLLDNFEWLSGYT 451
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 91 LPRFTEEEIKALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGD 150
+ R+ + A +GKV I LD N+Y + S EDQ AA+R F +G + P+ + G
Sbjct: 228 VARYRTKYQAAQQGKVGIVLDF-NWYEALSNSTEDQAAAQRARDFHIGWYLDPLIN--GH 284
Query: 151 YPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILXXXXXXXXXX 210
YP I++ +V + RLP+FT E+ + +KGS D+ +N YT+
Sbjct: 285 YPQIMQDLV----------KDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQT 334
Query: 211 XXXXXXDRAATY----SQDPNWPSSNSPWL 236
D TY + P P +NS WL
Sbjct: 335 PTSYSADWQVTYVFAKNGKPIGPQANSNWL 364
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYT 31
K +++ N+ GY AWS+LDNFEWL GYT
Sbjct: 423 KKAIDEGANVAGYFAWSLLDNFEWLSGYT 451
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 91 LPRFTEEEIKALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGD 150
+ R+ + A +GKV I LD N+Y + S EDQ AA+R F +G + P+ + G
Sbjct: 228 VARYRTKYQAAQQGKVGIVLDF-NWYEALSNSTEDQAAAQRARDFHIGWYLDPLIN--GH 284
Query: 151 YPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILXXXXXXXXXX 210
YP I++ +V + RLP+FT E+ + +KGS D+ +N YT+
Sbjct: 285 YPQIMQDLV----------KDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQT 334
Query: 211 XXXXXXDRAATY----SQDPNWPSSNSPWL 236
D TY + P P +NS WL
Sbjct: 335 PTSYSADWQVTYVFAKNGKPIGPQANSNWL 364
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYT 31
K +++ N+ GY AWS+LDNFEWL GYT
Sbjct: 423 KKAIDEGANVAGYFAWSLLDNFEWLSGYT 451
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 91 LPRFTEEEIKALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGD 150
+ R+ + A +GKV I LD N+Y + S EDQ AA+R F +G + P+ + G
Sbjct: 228 VARYRTKYQAAQQGKVGIVLDF-NWYEALSNSTEDQAAAQRARDFHIGWYLDPLIN--GH 284
Query: 151 YPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILXXXXXXXXXX 210
YP I++ +V + RLP+FT E+ + +KGS D+ +N YT+
Sbjct: 285 YPQIMQDLV----------KDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQT 334
Query: 211 XXXXXXDRAATY----SQDPNWPSSNSPWL 236
D TY + P P +NS WL
Sbjct: 335 PTSYSADWQVTYVFAKNGKPIGPQANSNWL 364
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYT 31
K +++ N+ GY AWS+LDNFEWL GYT
Sbjct: 423 KKAIDEGANVAGYFAWSLLDNFEWLSGYT 451
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 91 LPRFTEEEIKALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGD 150
+ R+ + A +GKV I LD N+Y + S EDQ AA+R F +G + P+ + G
Sbjct: 228 VARYRTKYQAAQQGKVGIVLDF-NWYEALSNSTEDQAAAQRARDFHIGWYLDPLIN--GH 284
Query: 151 YPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILXXXXXXXXXX 210
YP I++ +V + RLP+FT E+ + +KGS D+ +N YT+
Sbjct: 285 YPQIMQDLV----------KDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQT 334
Query: 211 XXXXXXDRAATY----SQDPNWPSSNSPWL 236
D TY + P P +NS WL
Sbjct: 335 PTSYSADWQVTYVFAKNGKPIGPQANSNWL 364
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYT 31
K +++ N+ GY AWS+LDNFEWL GYT
Sbjct: 423 KKAIDEGANVAGYFAWSLLDNFEWLSGYT 451
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Query: 104 GKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNS 163
G++ I L+ YP +A D+EAAER +F FA PIY GDYP +R+
Sbjct: 225 GQIGIVLNGDFTYPWDAADPADKEAAERRLEFFTAWFADPIY--LGDYPASMRK------ 276
Query: 164 AKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS 198
+ RLP FT EE + GS DF+ +NHYTS
Sbjct: 277 ----QLGDRLPTFTPEERALVHGSNDFYGMNHYTS 307
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
M A+ D N+ GY AWS++DNFEW DGY
Sbjct: 407 MVTAVELDGVNVKGYFAWSLMDNFEWADGYV 437
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 91 LPRFTEEEIKALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGD 150
+ R+ + A +GKV I LD N+Y + S EDQ AA+R F +G + P+ + G
Sbjct: 228 VARYRTKYQAAQQGKVGIVLDF-NWYEALSNSTEDQAAAQRARDFHIGWYLDPLIN--GH 284
Query: 151 YPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILXXXXXXXXXX 210
YP I++ +V + RLP+FT E+ + +KGS D+ +N YT+
Sbjct: 285 YPQIMQDLV----------KDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQT 334
Query: 211 XXXXXXD--RAATYSQD--PNWPSSNSPWL 236
D A ++++ P P +NS WL
Sbjct: 335 PTSYSADWQVTAVFAKNGKPIGPQANSNWL 364
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYT 31
K +++ N+ GY AWS+LDNFEWL GYT
Sbjct: 423 KKAIDEGANVAGYFAWSLLDNFEWLSGYT 451
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 104 GKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNS 163
G + ITL S + P + K D +AA+R F LG F HP+ G YP +R +V
Sbjct: 247 GIIGITLVSHWFEP-ASKEKADVDAAKRGLDFMLGWFMHPL--TKGRYPESMRYLV---- 299
Query: 164 AKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS 198
R RLP+F+ EE K L GSFDF LN+Y+S
Sbjct: 300 ------RKRLPKFSTEESKELTGSFDFLGLNYYSS 328
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGYTI 32
+ D N+ GY AWS+ DN EW GYT+
Sbjct: 434 IGDGVNVKGYFAWSLFDNMEWDSGYTV 460
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase With
Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase With
Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 104 GKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNS 163
G++ I D + P + T+ D EAA+R +F LG FA P + GDYP +R
Sbjct: 242 GQLGIAFDVMWFEPMSNTTI-DIEAAKRAQEFQLGWFADPFFF--GDYPATMR------- 291
Query: 164 AKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS 198
R RLPRFT +E +KG+ DF +NHYT+
Sbjct: 292 ---ARVGERLPRFTADEAAVVKGALDFVGINHYTT 323
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
+ ++ D C++ GY AWS+LDN+EW GY+
Sbjct: 427 LAASIKEDGCDVRGYFAWSLLDNWEWAAGYS 457
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Query: 67 GDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGK---VSITLDSSNYYPHNATS 122
GDYP +R R RLPRFT +E +KG V I ++ Y HN T+
Sbjct: 284 GDYPATMR----------ARVGERLPRFTADEAAVVKGALDFVGINHYTTYYTRHNNTN 332
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 104 GKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNS 163
GK+ T+ + + P+N T + A ER+ QF LG F P+ G YP I+ V
Sbjct: 250 GKIGPTMITRWFLPYNDTDRHSIAATERMKQFFLGWFMGPL--TNGTYPQIMIDTVG--- 304
Query: 164 AKEGRARSRLPRFTEEEIKALKGSFDFFALNHY 196
+RLP F+ EE +KGS+DF LN+Y
Sbjct: 305 -------ARLPTFSPEETNLVKGSYDFLGLNYY 330
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYTI 32
+ K + N+ GY AW++ DN+E+ +G+T+
Sbjct: 440 LNKVIKEKDVNVKGYLAWALGDNYEFNNGFTV 471
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 13/99 (13%)
Query: 100 KALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIV 159
K +G++ I L+S P + + D +A +R F LG F P+ + GDYP +R++V
Sbjct: 262 KCQEGEIGIVLNSMWMEPLSDV-QADIDAQKRALDFMLGWFLEPLTT--GDYPKSMRELV 318
Query: 160 DQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS 198
+ RLP+F+ ++ + LKG +DF +N+YT+
Sbjct: 319 ----------KGRLPKFSADDSEKLKGCYDFIGMNYYTA 347
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGY 30
++D N+ GY WS DNFEW GY
Sbjct: 453 IDDGVNVKGYFVWSFFDNFEWNLGY 477
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 12/67 (17%)
Query: 66 TGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKVSITLDSSNYYPHNATSKED 125
TGDYP +R++V + RLP+F+ ++ + LKG NYY +
Sbjct: 307 TGDYPKSMRELV----------KGRLPKFSADDSEKLKGCYDFI--GMNYYTATYVTNAV 354
Query: 126 QEAAERV 132
+ +E++
Sbjct: 355 KSNSEKL 361
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1:
Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 2:
Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part 3
Structure After Irradiation With 18.210e15 PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 4:
Structure After Irradiation With 27.210e15 PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 5:
Structure After Irradiation With 54.010e15 PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Refined
Part 6: Structure After A Radiation Dose Of 5410e15
PhotonsMM2
Length = 499
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 104 GKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNS 163
GK+ T+ + + P+N T + A ER+ +F LG F P+ G YP I+ V +
Sbjct: 248 GKIGPTMITRWFLPYNDTDRHSIAATERMKEFFLGWFMGPL--TNGTYPQIMIDTVGE-- 303
Query: 164 AKEGRARSRLPRFTEEEIKALKGSFDFFALNHY 196
RLP F+ EE +KGS+DF LN+Y
Sbjct: 304 --------RLPSFSPEESNLVKGSYDFLGLNYY 328
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYTI 32
+ K + N+ GY AW++ DN+E+ G+T+
Sbjct: 438 LNKVIKEKDVNVKGYLAWALGDNYEFNKGFTV 469
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition State
Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound To
Plant Myrosinase
Length = 501
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 104 GKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNS 163
GK+ T+ + + P+N T + A ER+ +F LG F P+ G YP I+ V +
Sbjct: 250 GKIGPTMITRWFLPYNDTDRHSIAATERMKEFFLGWFMGPL--TNGTYPQIMIDTVGE-- 305
Query: 164 AKEGRARSRLPRFTEEEIKALKGSFDFFALNHY 196
RLP F+ EE +KGS+DF LN+Y
Sbjct: 306 --------RLPSFSPEESNLVKGSYDFLGLNYY 330
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYTI 32
+ K + N+ GY AW++ DN+E+ G+T+
Sbjct: 440 LNKVIKEKDVNVKGYLAWALGDNYEFNKGFTV 471
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 105 KVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSA 164
++ + D P+ TS D++A ER + LG F P+ GDYP +R +
Sbjct: 255 RIGLAFDVMGRVPY-GTSFLDKQAEERSWDINLGWFLEPVVR--GDYPFSMRSL------ 305
Query: 165 KEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS 198
AR RLP F +E+ + L GS++ LN+YTS
Sbjct: 306 ----ARERLPFFKDEQKEKLAGSYNMLGLNYYTS 335
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 11 NIIGYTAWSILDNFEWLDGYT 31
N+ GY AWS+LDNFEW G+T
Sbjct: 450 NVQGYFAWSLLDNFEWFAGFT 470
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 105 KVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSA 164
++ + D P+ TS D++A ER + LG F P+ GDYP +R +
Sbjct: 255 RIGLAFDVMGRVPY-GTSFLDKQAEERSWDINLGWFLEPVVR--GDYPFSMRSL------ 305
Query: 165 KEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS 198
AR RLP F +E+ + L GS++ LN+YTS
Sbjct: 306 ----ARERLPFFKDEQKEKLAGSYNMLGLNYYTS 335
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 11 NIIGYTAWSILDNFEWLDGYT 31
N+ GY AWS+LDNFEW G+T
Sbjct: 450 NVQGYFAWSLLDNFEWFAGFT 470
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 105 KVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSA 164
++ + D P+ TS D++A ER + LG F P+ GDYP +R +
Sbjct: 255 RIGLAFDVMGRVPY-GTSFLDKQAEERSWDINLGWFLEPVVR--GDYPFSMRSL------ 305
Query: 165 KEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS 198
AR RLP F +E+ + L GS++ LN+YTS
Sbjct: 306 ----ARERLPFFKDEQKEKLAGSYNMLGLNYYTS 335
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 11 NIIGYTAWSILDNFEWLDGYT 31
N+ GY AWS+LDNFEW G+T
Sbjct: 450 NVQGYFAWSLLDNFEWFAGFT 470
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 105 KVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSA 164
++ + D P+ TS D++A ER + LG F P+ GDYP +R +
Sbjct: 250 RIGLAFDVMGRVPY-GTSFLDKQAEERSWDINLGWFLEPVVR--GDYPFSMRSL------ 300
Query: 165 KEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS 198
AR RLP F +E+ + L GS++ LN+YTS
Sbjct: 301 ----ARERLPFFKDEQKEKLAGSYNMLGLNYYTS 330
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 11 NIIGYTAWSILDNFEWLDGYT 31
N+ GY AWS+LDNFEW G+T
Sbjct: 445 NVQGYFAWSLLDNFEWFAGFT 465
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 105 KVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSA 164
K+ + D Y P+ + +DQ A ER + +G F P+ GDYP +R ++
Sbjct: 301 KIGMAFDVMGYEPYQDSFLDDQ-ARERSIDYNMGWFLEPVVR--GDYPFSMRSLIGD--- 354
Query: 165 KEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS 198
RLP FT+EE + L S D LN+YTS
Sbjct: 355 -------RLPMFTKEEQEKLASSCDIMGLNYYTS 381
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYT 31
K ++ ++ G+ W ++DNFEW GY+
Sbjct: 485 KDAIDQGADVRGHFTWGLIDNFEWSLGYS 513
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 105 KVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSA 164
K+ + D Y P+ + +DQ A ER + +G F P+ GDYP +R ++
Sbjct: 301 KIGMAFDVMGYEPYQDSFLDDQ-ARERSIDYNMGWFLEPVVR--GDYPFSMRSLIGD--- 354
Query: 165 KEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS 198
RLP FT+EE + L S D LN+YTS
Sbjct: 355 -------RLPMFTKEEQEKLASSCDIMGLNYYTS 381
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYT 31
K ++ ++ G+ W ++DNFEW GY+
Sbjct: 485 KDAIDQGADVRGHFTWGLIDNFEWSLGYS 513
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 105 KVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSA 164
K+ + D Y P+ + +DQ A ER + +G F P+ GDYP +R ++
Sbjct: 301 KIGMAFDVMGYEPYQDSFLDDQ-ARERSIDYNMGWFLEPVVR--GDYPFSMRSLIGD--- 354
Query: 165 KEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS 198
RLP FT+EE + L S D LN+YTS
Sbjct: 355 -------RLPMFTKEEQEKLASSCDIMGLNYYTS 381
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYT 31
K ++ ++ G+ W ++DNFEW GY+
Sbjct: 485 KDAIDQGADVRGHFTWGLIDNFEWGSGYS 513
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 100 KALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIV 159
K G++ + L+ P+ T DQ+A ER LG F P+ GDYP +R
Sbjct: 299 KGADGRIGLALNVFGRVPYTNTFL-DQQAQERSMDKCLGWFLEPVVR--GDYPFSMRV-- 353
Query: 160 DQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSIL 200
AR R+P F E+E + L GS+D +N+YTS
Sbjct: 354 --------SARDRVPYFKEKEQEKLVGSYDMIGINYYTSTF 386
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYT 31
K ++ ++ GY AWS+LDNFEW GYT
Sbjct: 489 KQSIDLGADVRGYFAWSLLDNFEWSSGYT 517
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 100 KALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIV 159
K G++ + L+ P+ T DQ+A ER LG F P+ GDYP +R
Sbjct: 299 KGADGRIGLALNVFGRVPYTNTFL-DQQAQERSMDKCLGWFLEPVVR--GDYPFSMRV-- 353
Query: 160 DQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSIL 200
AR R+P F E+E + L GS+D +N+YTS
Sbjct: 354 --------SARDRVPYFKEKEQEKLVGSYDMIGINYYTSTF 386
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYT 31
K ++ ++ GY AWS+LDNFEW GYT
Sbjct: 489 KQSIDLGADVRGYFAWSLLDNFEWSSGYT 517
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 100 KALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIV 159
K G++ + L+ P+ T DQ+A ER LG F P+ GDYP +R
Sbjct: 299 KGADGRIGLALNVFGRVPYTNTFL-DQQAQERSMDKCLGWFLEPVVR--GDYPFSMRV-- 353
Query: 160 DQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSIL 200
AR R+P F E+E + L GS+D +N+YTS
Sbjct: 354 --------SARDRVPYFKEKEQEKLVGSYDMIGINYYTSTF 386
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYT 31
K ++ ++ GY AWS+LDNFEW GYT
Sbjct: 489 KQSIDLGADVRGYFAWSLLDNFEWSSGYT 517
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 16/116 (13%)
Query: 86 RARSRLPRFTEEEIKALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFT-LGLFAHPI 144
RA +R + E +K GK+ I ++ + P + +ED A + QF LF +PI
Sbjct: 221 RAHARAVKVFRETVK--DGKIGIVFNNGYFEP-ASEKEEDIRAVRFMHQFNNYPLFLNPI 277
Query: 145 YSEAGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSIL 200
Y GDYP +V + AR LP ++++ ++ DF LN+Y+ L
Sbjct: 278 YR--GDYPELVLEF----------AREYLPENYKDDMSEIQEKIDFVGLNYYSGHL 321
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 14 GYTAWSILDNFEWLDGYT 31
GY WS+LDNFEW +GY+
Sbjct: 416 GYFVWSLLDNFEWAEGYS 433
>pdb|1BGG|A Chain A, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|B Chain B, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|C Chain C, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|D Chain D, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
Length = 448
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 6/38 (15%)
Query: 1 MQKALV------NDKCNIIGYTAWSILDNFEWLDGYTI 32
MQ+ LV +D ++ GY AWS+LDNFEW +GY +
Sbjct: 375 MQQHLVQVHRTIHDGLHVKGYMAWSLLDNFEWAEGYNM 412
>pdb|1UYQ|A Chain A, Mutated B-Glucosidase A From Paenibacillus Polymyxa
Showing Increased Stability
Length = 447
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 6/38 (15%)
Query: 1 MQKALV------NDKCNIIGYTAWSILDNFEWLDGYTI 32
MQ+ LV +D ++ GY AWS+LDNFEW +GY +
Sbjct: 374 MQQHLVQVHRAIHDGLHVKGYMAWSLLDNFEWAEGYNM 411
>pdb|1E4I|A Chain A, 2-Deoxy-2-Fluoro-Beta-D-GlucosylENZYME INTERMEDIATE
Complex Of The Beta-Glucosidase From Bacillus Polymyxa
Length = 447
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 6/38 (15%)
Query: 1 MQKALV------NDKCNIIGYTAWSILDNFEWLDGYTI 32
MQ+ LV +D ++ GY AWS+LDNFEW +GY +
Sbjct: 374 MQQHLVQVHRTIHDGLHVKGYMAWSLLDNFEWAEGYNM 411
>pdb|1BGA|A Chain A, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|B Chain B, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|C Chain C, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|D Chain D, Beta-Glucosidase A From Bacillus Polymyxa
Length = 447
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 6/38 (15%)
Query: 1 MQKALV------NDKCNIIGYTAWSILDNFEWLDGYTI 32
MQ+ LV +D ++ GY AWS+LDNFEW +GY +
Sbjct: 374 MQQHLVQVHRTIHDGLHVKGYMAWSLLDNFEWAEGYNM 411
>pdb|1TR1|A Chain A, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|B Chain B, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|C Chain C, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|D Chain D, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
Length = 447
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 6/38 (15%)
Query: 1 MQKALV------NDKCNIIGYTAWSILDNFEWLDGYTI 32
MQ+ LV +D ++ GY AWS+LDNFEW +GY +
Sbjct: 374 MQQHLVQVHRTIHDGLHVKGYMAWSLLDNFEWAEGYNM 411
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From Soil
Metagenome
Length = 465
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 8 DKCNIIGYTAWSILDNFEWLDGYT 31
D ++ GY AWS+LDNFEW +GY+
Sbjct: 407 DGVDLRGYYAWSLLDNFEWAEGYS 430
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 8 DKCNIIGYTAWSILDNFEWLDGYT 31
D ++ GY AWS+LDNFEW +GY+
Sbjct: 386 DGVDLRGYYAWSLLDNFEWAEGYS 409
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
Length = 449
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGYTI 32
+ D N+ GY WS++DNFEW +GY +
Sbjct: 389 IEDGINLKGYMEWSLMDNFEWAEGYGM 415
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 101 ALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVD 160
+ G++ I ++S P+ T KED EA RV ++ + PIY G+YP + +
Sbjct: 211 GISGEIGIAPNTSWAVPYRRT-KEDMEACLRVNGWSGDWYLDPIY--FGEYPKFMLDWYE 267
Query: 161 QNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTS 198
K P + +++ + DF +N+YTS
Sbjct: 268 NLGYK--------PPIVDGDMELIHQPIDFIGINYYTS 297
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGYT 31
+ D ++ GY WS+LDNFEW GY+
Sbjct: 418 IKDGSDVRGYFLWSLLDNFEWAHGYS 443
>pdb|4HA3|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Tris
pdb|4HA4|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Glycerol
Length = 489
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGYT 31
+ D N+IGY WS+ DN+EW G++
Sbjct: 410 LQDGVNVIGYLHWSLADNYEWASGFS 435
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 94 FTEEEIKALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPP 153
F EE+ L G++ ITL+ + YP S++D +AA + + F P++ G YP
Sbjct: 215 FREED---LPGEIGITLNLTPAYP-AGDSEKDVKAASLLDDYINAWFLSPVFK--GSYPE 268
Query: 154 IVRQIVDQNSAKEGRARSRLPRFTEE--EIKALKGSFDFFALNHYTSIL 200
+ I +QN L FT + ++ + DF +N+Y+ ++
Sbjct: 269 ELHHIYEQN----------LGAFTTQPGDMDIISRDIDFLGINYYSRMV 307
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGYT 31
+ D + GY WS++DNFEW GY+
Sbjct: 396 LKDGVPLRGYYVWSLMDNFEWAYGYS 421
>pdb|3ZJK|A Chain A, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|B Chain B, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|C Chain C, Crystal Structure Of Ttb-gly F401s Mutant
Length = 431
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 7 NDKCNIIGYTAWSILDNFEWLDGYT 31
+ ++ GY WS++DNFEW GYT
Sbjct: 374 EEGVDLRGYFVWSLMDNFEWAFGYT 398
>pdb|1UG6|A Chain A, Structure Of Beta-Glucosidase At Atomic Resolution From
Thermus Thermophilus Hb8
Length = 431
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 7 NDKCNIIGYTAWSILDNFEWLDGYT 31
+ ++ GY WS++DNFEW GYT
Sbjct: 374 EEGVDLRGYFVWSLMDNFEWAFGYT 398
>pdb|1NP2|A Chain A, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
pdb|1NP2|B Chain B, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
Length = 436
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 7 NDKCNIIGYTAWSILDNFEWLDGYT 31
+ ++ GY WS++DNFEW GYT
Sbjct: 374 EEGVDLRGYFVWSLMDNFEWAFGYT 398
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGY 30
+ D ++ GY WS +DN+EW +G+
Sbjct: 350 IEDGLDVRGYFYWSFMDNYEWKEGF 374
>pdb|1GOW|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus
pdb|1GOW|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus
Length = 489
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGYTI 32
+N ++ GY WS+ DN+EW G+++
Sbjct: 413 INSGADVRGYLHWSLADNYEWASGFSM 439
>pdb|1UWI|A Chain A, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|B Chain B, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|C Chain C, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|D Chain D, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
Length = 489
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGYTI 32
+N ++ GY WS+ DN+EW G+++
Sbjct: 413 INSGADVRGYLHWSLADNYEWASGFSM 439
>pdb|4EAM|A Chain A, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAM|B Chain B, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAN|A Chain A, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
pdb|4EAN|B Chain B, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
Length = 489
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGYTI 32
+N ++ GY WS+ DN+EW G+++
Sbjct: 413 INSGADVRGYLHWSLADNYEWASGFSM 439
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 14 GYTAWSILDNFEWLDGY 30
GY WS +DNFEW +GY
Sbjct: 395 GYYIWSFMDNFEWAEGY 411
>pdb|1UWQ|A Chain A, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWQ|B Chain B, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWR|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWR|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWS|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWS|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWT|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWT|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWU|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|1UWU|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|2CEQ|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CEQ|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CER|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2CER|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
Length = 489
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGYTI 32
+N ++ GY WS+ DN+EW G+++
Sbjct: 413 INSGADVRGYLHWSLADNYEWASGFSM 439
>pdb|2O9P|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa
pdb|2O9T|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
Glucose
pdb|2Z1S|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa Complexed
With Cellotetraose
Length = 454
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 5 LVNDKCNIIGYTAWSILDNFEWLDGYT 31
+ + + GY WS LDNFEW GY+
Sbjct: 395 FIEEGGQLKGYFVWSFLDNFEWAWGYS 421
>pdb|2JIE|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
2- F-Glucose
Length = 454
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 5 LVNDKCNIIGYTAWSILDNFEWLDGYT 31
+ + + GY WS LDNFEW GY+
Sbjct: 395 FIEEGGQLKGYFVWSFLDNFEWAWGYS 421
>pdb|2O9R|A Chain A, Beta-Glucosidase B Complexed With Thiocellobiose
Length = 452
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 5 LVNDKCNIIGYTAWSILDNFEWLDGYT 31
+ + + GY WS LDNFEW GY+
Sbjct: 393 FIEEGGQLKGYFVWSFLDNFEWAWGYS 419
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGY 30
+ D N+ GY WS++D F W +GY
Sbjct: 409 IADGANVKGYFIWSLMDVFSWSNGY 433
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGY 30
+ D N+ GY WS++D F W +GY
Sbjct: 409 IADGANVKGYFIWSLMDVFSWSNGY 433
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGY 30
+ D N+ GY WS++D F W +GY
Sbjct: 409 IADGANVKGYFIWSLMDVFSWSNGY 433
>pdb|3APG|A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|B Chain B, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|C Chain C, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|D Chain D, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
Length = 473
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 6 VNDKCNIIGYTAWSILDNFEWLDGYTI 32
+ + ++ GY WS+ DN+EW G+ +
Sbjct: 399 MKEGADVRGYLHWSLTDNYEWAQGFRM 425
>pdb|1QVB|A Chain A, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
pdb|1QVB|B Chain B, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
Length = 481
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 7 NDKCNIIGYTAWSILDNFEWLDGY 30
N+ + GY WS+ DN+EW G+
Sbjct: 413 NEGIPVKGYLHWSLTDNYEWAQGF 436
>pdb|2O2C|A Chain A, Crystal Structure Of Phosphoglucose Isomerase From T.
Brucei Containing Glucose-6-Phosphate In The Active Site
pdb|2O2C|B Chain B, Crystal Structure Of Phosphoglucose Isomerase From T.
Brucei Containing Glucose-6-Phosphate In The Active Site
pdb|2O2C|C Chain C, Crystal Structure Of Phosphoglucose Isomerase From T.
Brucei Containing Glucose-6-Phosphate In The Active Site
pdb|2O2D|A Chain A, Crystal Structure Of Phosphoglucose Isomerase From
Trypanosoma Brucei Complexed With Citrate
pdb|2O2D|B Chain B, Crystal Structure Of Phosphoglucose Isomerase From
Trypanosoma Brucei Complexed With Citrate
pdb|2O2D|C Chain C, Crystal Structure Of Phosphoglucose Isomerase From
Trypanosoma Brucei Complexed With Citrate
Length = 613
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 52 ISMISKSAHPIYSETGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKVSITLD 111
I++ ++S PIY + D P V +++DQ + + R+ + KA++ V+I +
Sbjct: 149 IALRNRSNRPIYVDGKDVMPAVNKVLDQMRSFSEKVRT--GEWKGHTGKAIRHVVNIGIG 206
Query: 112 SSNYYPHNAT 121
S+ P AT
Sbjct: 207 GSDLGPVMAT 216
>pdb|3EMC|A Chain A, Crystal Structure Of Xynb, An Intracellular Xylanase From
Paenibacillus Barcinonensis
pdb|3EMQ|A Chain A, Crystal Structure Of Xilanase Xynb From Paenibacillus
Barcelonensis Complexed With An Inhibitor
pdb|3EMZ|A Chain A, Crystal Structure Of Xylanase Xynb From Paenibacillus
Barcinonensis Complexed With A Conduramine Derivative
Length = 331
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 9 KCNIIGYTAWSILDNFEWLDGYTI 32
+ NI T W + DN+ WLD + +
Sbjct: 281 RSNITSVTFWGVADNYTWLDNFPV 304
>pdb|4FKC|A Chain A, Recombinant Prolidase From Thermococcus Sibiricus
Length = 377
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 84 EGRARSRLPRFTEEEIKALKGKVSITLDSSNYYPHNATS-KEDQEAAERVF---QFTLGL 139
EG + PR E+E++ G+V + DS N Y AT KE + E++ +G+
Sbjct: 65 EGLLTAIAPRLYEKELEEFNGEVVLWSDSENPYKIFATKIKETFKEGEKLLIDDTMPVGV 124
Query: 140 F--AHPIYSEAGDYP--PIV---RQIVDQNSAK 165
F A I+ + +P P++ R+I D++ K
Sbjct: 125 FLKAKDIFDKYSLHPISPVISELREIKDKDEIK 157
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.132 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,870,687
Number of Sequences: 62578
Number of extensions: 255741
Number of successful extensions: 932
Number of sequences better than 100.0: 72
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 751
Number of HSP's gapped (non-prelim): 158
length of query: 241
length of database: 14,973,337
effective HSP length: 96
effective length of query: 145
effective length of database: 8,965,849
effective search space: 1300048105
effective search space used: 1300048105
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)