RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14903
(241 letters)
>d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid
(Brevicoryne brassicae) [TaxId: 69196]}
Length = 462
Score = 73.7 bits (180), Expect = 8e-16
Identities = 64/185 (34%), Positives = 92/185 (49%), Gaps = 7/185 (3%)
Query: 51 PISMISKSAHPIYSETGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKVSITL 110
PI++ + Y+ + + RL E GK+SI++
Sbjct: 166 PIAVCKGYSIKAYAPNLNLKTTGHYLAGHTQLIAHGKAYRLYE--EMFKPTQNGKISISI 223
Query: 111 DSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGRAR 170
+ P NA S +D E AER QF G F HP+Y GDYPPI+++ VDQ S +EG
Sbjct: 224 SGVFFMPKNAESDDDIETAERANQFERGWFGHPVYK--GDYPPIMKKWVDQKSKEEGLPW 281
Query: 171 SRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNQSSNAPPSIINDRAATYSQDPNWPS 230
S+LP+FT++EIK LKG+ DF+ALNHY+S L+ + + P+ D + S D W
Sbjct: 282 SKLPKFTKDEIKLLKGTADFYALNHYSSRLVTFGS---DPNPNFNPDASYVTSVDEAWLK 338
Query: 231 SNSPW 235
N
Sbjct: 339 PNETP 343
Score = 56.0 bits (134), Expect = 9e-10
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
+A+ DKCN+IGYT WS+LDNFEW GY+
Sbjct: 397 TLQAMYEDKCNVIGYTVWSLLDNFEWFYGYS 427
>d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White
mustard (Sinapis alba) [TaxId: 3728]}
Length = 499
Score = 56.4 bits (135), Expect = 6e-10
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
+ K + N+ GY AW++ DN+E+ G+T
Sbjct: 438 LNKVIKEKDVNVKGYLAWALGDNYEFNKGFT 468
Score = 52.1 bits (124), Expect = 1e-08
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 12/133 (9%)
Query: 97 EEIKALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVR 156
+ GK+ T+ + + P+N T + A ER+ +F LG F P+ + G YP I+
Sbjct: 241 KNYTHQGGKIGPTMITRWFLPYNDTDRHSIAATERMKEFFLGWFMGPLTN--GTYPQIMI 298
Query: 157 QIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNQSSNAPPSIIN 216
V + RLP F+ EE +KGS+DF LN+Y + + N+
Sbjct: 299 DTVGE----------RLPSFSPEESNLVKGSYDFLGLNYYFTQYAQPSPNPVNSTNHTAM 348
Query: 217 DRAATYSQDPNWP 229
A N
Sbjct: 349 MDAGAKLTYINAS 361
>d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping
white clover (Trifolium repens) [TaxId: 3899]}
Length = 490
Score = 56.3 bits (135), Expect = 7e-10
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 16/148 (10%)
Query: 93 RFTEEEIKALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYP 152
R + + +A + + S+++ + K D +AA+R F LG F HP+ G YP
Sbjct: 235 RLYKTKYQASQNGIIGITLVSHWFEPASKEKADVDAAKRGLDFMLGWFMHPLT--KGRYP 292
Query: 153 PIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNQSSNAPP 212
+R +V R RLP+F+ EE K L GSFDF LN+Y+S A + NA P
Sbjct: 293 ESMRYLV----------RKRLPKFSTEESKELTGSFDFLGLNYYSSYYAAKAPRIPNARP 342
Query: 213 SIINDRAATYSQD----PNWPSSNSPWL 236
+I D + + P P + S WL
Sbjct: 343 AIQTDSLINATFEHNGKPLGPMAASSWL 370
Score = 52.5 bits (125), Expect = 1e-08
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
+ A + D N+ GY AWS+ DN EW GYT
Sbjct: 430 VLTA-IGDGVNVKGYFAWSLFDNMEWDSGYT 459
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId:
1406]}
Length = 447
Score = 53.7 bits (128), Expect = 5e-09
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
+ + ++D ++ GY AWS+LDNFEW +GY
Sbjct: 381 VHRT-IHDGLHVKGYMAWSLLDNFEWAEGYN 410
Score = 39.0 bits (90), Expect = 3e-04
Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 11/124 (8%)
Query: 105 KVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSA 164
++ I + S P++ TS+ED+ A R F PIY G YP + +
Sbjct: 215 QIGIAPNVSWAVPYS-TSEEDKAACARTISLHSDWFLQPIYQ--GSYPQFLVDWFAE--- 268
Query: 165 KEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNQSSNAPPSIINDRAATYSQ 224
+ + ++ + D +N+Y+ + N ++ IN
Sbjct: 269 -----QGATVPIQDGDMDIIGEPIDMIGINYYSMSVNRFNPEAGFLQSEEINMGLPVTDI 323
Query: 225 DPNW 228
Sbjct: 324 GWPV 327
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp.
alkalophilus [TaxId: 1397]}
Length = 449
Score = 53.6 bits (128), Expect = 5e-09
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
+A + D N+ GY WS++DNFEW +GY
Sbjct: 385 ASRA-IEDGINLKGYMEWSLMDNFEWAEGYG 414
Score = 43.6 bits (102), Expect = 1e-05
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 11/135 (8%)
Query: 104 GKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNS 163
G++ I ++S P+ T KED EA RV ++ + PIY G+YP +
Sbjct: 214 GEIGIAPNTSWAVPYRRT-KEDMEACLRVNGWSGDWYLDPIYF--GEYPKFMLDWY---- 266
Query: 164 AKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNQSSNAPPSIINDRAATYS 223
P + +++ + DF +N+YTS + N + S
Sbjct: 267 ----ENLGYKPPIVDGDMELIHQPIDFIGINYYTSSMNRYNPGEAGGMLSSEAISMGAPK 322
Query: 224 QDPNWPSSNSPWLKR 238
D W
Sbjct: 323 TDIGWEIYAEGLYDL 337
>d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL
{Lactococcus lactis [TaxId: 1358]}
Length = 468
Score = 53.3 bits (127), Expect = 6e-09
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
+ A + D N+ GY WS++D F W +GY
Sbjct: 405 LSDA-IADGANVKGYFIWSLMDVFSWSNGYE 434
Score = 50.2 bits (119), Expect = 6e-08
Identities = 33/202 (16%), Positives = 61/202 (30%), Gaps = 12/202 (5%)
Query: 49 WVPISMISKSAHPIYSETGDYPPIVRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKVSI 108
W + I Y P I + + S + K KG++ +
Sbjct: 155 WTTFNEIGPIGDGQYLVGKFPPGIKYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGV 214
Query: 109 TLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQNSAKEGR 168
YP++ + D AAE Y G Y + V+ A+ G
Sbjct: 215 VHALPTKYPYDPENPADVRAAELEDIIHNKFILDATY--LGHYSDKTMEGVNHILAENG- 271
Query: 169 ARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNQSSNAPPSIINDRAATYSQD--- 225
L + + A K DF +N+Y S + + + + ++ ++ Q
Sbjct: 272 GELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGV 331
Query: 226 ------PNWPSSNSPWLKRSIG 241
P ++ W+ G
Sbjct: 332 GRRVAPDYVPRTDWDWIIYPEG 353
>d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId:
1931]}
Length = 464
Score = 53.3 bits (127), Expect = 7e-09
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
+ +A + D ++ GY WS+LDNFEW GY+
Sbjct: 400 VHRA-IKDGSDVRGYFLWSLLDNFEWAHGYS 429
Score = 46.0 bits (108), Expect = 2e-06
Identities = 23/152 (15%), Positives = 49/152 (32%), Gaps = 19/152 (12%)
Query: 98 EIKALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQ 157
+ + S+TL+ + S D +A R+ +F P+ G YP
Sbjct: 208 DRLPADAQCSVTLNIHHVR-PLTDSDADADAVRRIDALANRVFTGPMLQ--GAYP----- 259
Query: 158 IVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNQSSNAPPSIIND 217
++ K+ + + +++ DF +N+Y+ L++ + S
Sbjct: 260 ---EDLVKDTAGLTDWSFVRDGDLRLAHQKLDFLGVNYYSPTLVSEADGSGTHNSDGHGR 316
Query: 218 RAATY--------SQDPNWPSSNSPWLKRSIG 241
A + P ++ W G
Sbjct: 317 SAHSPWPGADRVAFHQPPGETTAMGWAVDPSG 348
>d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima
[TaxId: 2336]}
Length = 443
Score = 53.3 bits (127), Expect = 7e-09
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
KA + + + GY WS+LDNFEW +GY+
Sbjct: 380 AWKA-IQEGVPLKGYFVWSLLDNFEWAEGYS 409
Score = 48.6 bits (115), Expect = 2e-07
Identities = 27/139 (19%), Positives = 52/139 (37%), Gaps = 22/139 (15%)
Query: 103 KGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQIVDQN 162
GK+ I ++ + P + ++ + LF +PIY GDYP +V +
Sbjct: 212 DGKIGIVFNNGYFEPASEKEEDIRAVRFMHQFNNYPLFLNPIY--RGDYPELVLEFA--- 266
Query: 163 SAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNQSSNAPPSIINDRAATY 222
R LP ++++ ++ DF LN+Y+ L+ + + A
Sbjct: 267 -------REYLPENYKDDMSEIQEKIDFVGLNYYSGHLVKFDP----------DAPAKVS 309
Query: 223 SQDPNWPSSNSPWLKRSIG 241
+ + P + W G
Sbjct: 310 FVERDLPKTAMGWEIVPEG 328
>d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus
solfataricus [TaxId: 2287]}
Length = 489
Score = 53.0 bits (126), Expect = 8e-09
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
+ +A +N ++ GY WS+ DN+EW G++
Sbjct: 409 VHRA-INSGADVRGYLHWSLADNYEWASGFS 438
Score = 33.3 bits (75), Expect = 0.022
Identities = 8/50 (16%), Positives = 18/50 (36%)
Query: 186 GSFDFFALNHYTSILIANNNQSSNAPPSIINDRAATYSQDPNWPSSNSPW 235
G D+ +N+YT ++ + + + P+S+ W
Sbjct: 312 GRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSVSLAGLPTSDFGW 361
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus
[TaxId: 274]}
Length = 426
Score = 52.9 bits (126), Expect = 9e-09
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
+A + ++ GY WS++DNFEW GYT
Sbjct: 366 ALRA-REEGVDLRGYFVWSLMDNFEWAFGYT 395
>d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus
horikoshii [TaxId: 53953]}
Length = 423
Score = 52.9 bits (126), Expect = 9e-09
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
+ KA + D ++ GY WS +DN+EW +G+
Sbjct: 346 VHKA-IEDGLDVRGYFYWSFMDNYEWKEGFG 375
Score = 30.6 bits (68), Expect = 0.16
Identities = 21/138 (15%), Positives = 40/138 (28%), Gaps = 26/138 (18%)
Query: 98 EIKALKGKVSITLDSSNYYPHNATSKEDQEAAERVFQFTLGLFAHPIYSEAGDYPPIVRQ 157
E+ K KV I + P + + D++AAE+ F I+S G Y + +
Sbjct: 195 ELLHGKFKVGIVKNIPIILPASDK-ERDRKAAEKADNLFNWHFLDAIWS--GKYRGVFK- 250
Query: 158 IVDQNSAKEGRARSRLPRFTEEEIKALKGSFDFFALNHYTSILIANNNQSSNAPPSIIND 217
+ + DF +N+YT+ + + +
Sbjct: 251 ----------------------TYRIPQSDADFIGVNYYTASEVRHTWNPLKFFFEVKLA 288
Query: 218 RAATYSQDPNWPSSNSPW 235
+ W
Sbjct: 289 DISERKTQMGWSVYPKGI 306
>d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum
bicolor [TaxId: 4558]}
Length = 484
Score = 52.9 bits (126), Expect = 9e-09
Identities = 14/31 (45%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
++++ ++ ++ GY AWS+LDNFEW GYT
Sbjct: 425 LKQS-IDLGADVRGYFAWSLLDNFEWSSGYT 454
>d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera
aggregans [TaxId: 54254]}
Length = 481
Score = 52.5 bits (125), Expect = 1e-08
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 1 MQKALVNDKCNIIGYTAWSILDNFEWLDGYT 31
+ KA N+ + GY WS+ DN+EW G+
Sbjct: 408 VWKA-ANEGIPVKGYLHWSLTDNYEWAQGFR 437
Score = 34.0 bits (77), Expect = 0.013
Identities = 8/60 (13%), Positives = 17/60 (28%)
Query: 176 FTEEEIKALKGSFDFFALNHYTSILIANNNQSSNAPPSIINDRAATYSQDPNWPSSNSPW 235
E + L D+ +N+Y+ ++ + P S+ W
Sbjct: 301 INVEYRRDLANRLDWLGVNYYSRLVYKIVDDKPIILHGYGFLCTPGGISPAENPCSDFGW 360
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation
factor SelB {Moorella thermoacetica [TaxId: 1525]}
Length = 64
Score = 27.3 bits (61), Expect = 0.34
Identities = 4/31 (12%), Positives = 9/31 (29%)
Query: 143 PIYSEAGDYPPIVRQIVDQNSAKEGRARSRL 173
Y + PP +++ + L
Sbjct: 14 DKYRVSRWQPPSFKEVAGSFNLDPSELEELL 44
Score = 25.4 bits (56), Expect = 1.5
Identities = 4/31 (12%), Positives = 9/31 (29%)
Query: 61 PIYSETGDYPPIVRQIVDQNSAKEGRARSRL 91
Y + PP +++ + L
Sbjct: 14 DKYRVSRWQPPSFKEVAGSFNLDPSELEELL 44
>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 81
Score = 26.9 bits (59), Expect = 0.71
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Query: 166 EGRARSRLPRFTEEEIKALKGSFDFFALNHYTSI 199
+ AR+ L +EE I K +FD F + I
Sbjct: 1 QAEARAFL---SEEMIAEFKAAFDMFDADGGGDI 31
>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 165
Score = 27.7 bits (60), Expect = 0.84
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 176 FTEEEIKALKGSFDFFALNHYTSI 199
F +EIK L F L++ S+
Sbjct: 10 FDADEIKRLGKRFKKLDLDNSGSL 33
>gi|148225444|ref|NP_001084009.1|(23-166:170) myosin light chain,
phosphorylatable, fast skeletal muscle [Xenopus laevis]
gi|27371289|gb|AAH41503.1| Mylpf-prov protein [Xenopus
laevis] gi|32450381|gb|AAH53808.1| Mylpf-prov protein
[Xenopus laevis] gi|45361043|ref|NP_989158.1| myosin,
light polypeptide 2, regulatory, cardiac, slow [Xenopus
(Silurana) tropicalis] gi|38494267|gb|AAH61602.1| Fast
skeletal myosin light chain 2 [Xenopus tropicalis]
gi|68342098|gb|AAY90073.1| MLC2 [Xenopus tropicalis]
gi|89272443|emb|CAJ83266.1| fast skeletal myosin light
chain 2 [Xenopus tropicalis] E=1e-68 s/c=1.81 id=86%
cov=100%
Length = 144
Score = 27.2 bits (59), Expect = 1.1
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 176 FTEEEIKALKGSFDFFALNH 195
F + +I+ K +F N
Sbjct: 1 FDQTQIQEFKEAFTVIDQNR 20
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6
[TaxId: 1422]}
Length = 330
Score = 27.9 bits (61), Expect = 1.1
Identities = 9/39 (23%), Positives = 14/39 (35%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYTISQADDLRSL 41
+ I T W I D+ WLD + + + L
Sbjct: 275 ALFKEYRDVIQSVTFWGIADDHTWLDNFPVHGRKNWPLL 313
>d1k61a_ a.4.1.1 (A:) mat alpha2 Homeodomain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 60
Score = 25.5 bits (56), Expect = 1.4
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 172 RLPRFTEEEIKALKGSFDFFALNHYTSI 199
R RFT+E ++ L+ F N Y
Sbjct: 1 RGHRFTKENVRILESWFAKNIENPYLDT 28
>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD
{Soybean (Glycine max) [TaxId: 3847]}
Length = 182
Score = 26.5 bits (57), Expect = 2.4
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 175 RFTEEEIKALKGSFDFFALNH 195
R +EEEI LK F ++
Sbjct: 3 RLSEEEIGGLKELFKMIDTDN 23
>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 77
Score = 25.0 bits (54), Expect = 2.9
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 176 FTEEEIKALKGSFDFFALNHYTSI 199
TEE+I K +F F ++ SI
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSI 27
>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId:
10116]}
Length = 73
Score = 24.9 bits (54), Expect = 3.2
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 177 TEEEIKALKGSFDFFALNHYTSI 199
TEE+I K +F F + +I
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTI 25
>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 183
Score = 26.1 bits (56), Expect = 3.6
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 176 FTEEEIKALKGSFDFFALNHYTSILI 201
F+ EI+AL F + LI
Sbjct: 11 FSVSEIEALYELFKKISSAVIDDGLI 36
>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 162
Score = 25.7 bits (55), Expect = 3.8
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 163 SAKEGRARSRLPRFTEEEIKALKGSFDFFALNH 195
+ ++ AR+ L +EE I K +FD F +
Sbjct: 4 TDQQAEARAFL---SEEMIAEFKAAFDMFDADG 33
>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 146
Score = 25.6 bits (55), Expect = 3.9
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 176 FTEEEIKALKGSFDFFALNHYTSI 199
TEE+I K +F F ++ SI
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSI 27
>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia)
[TaxId: 5888]}
Length = 146
Score = 25.2 bits (54), Expect = 5.2
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 175 RFTEEEIKALKGSFDFFALNH 195
+ TEE+I K +F F +
Sbjct: 2 QLTEEQIAEFKEAFALFDKDG 22
>d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]}
Length = 350
Score = 25.5 bits (55), Expect = 5.9
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 3 KALVNDKCNIIGYTAWSILDNFEWLDGYTISQADDLRSL 41
K + I T W + D+ WL+G+ I + L
Sbjct: 288 KLFIKHSDKIDRATFWGVSDDASWLNGFPIPGRTNYPLL 326
>d1bg1a2 b.2.5.5 (A:322-575) STAT3b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 254
Score = 25.6 bits (56), Expect = 5.9
Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 13/82 (15%)
Query: 157 QIVDQNSAKEGRARSRLPRFTEEEIKALKGSFD-FFALNHYT---------SILIANNNQ 206
+ +Q GRA EE+ + +F+ ++I+N Q
Sbjct: 91 TLREQRCGNGGRANCDASLIVTEELHLI--TFETEVYHQGLKIDLETHSLPVVVISNICQ 148
Query: 207 SSNAPPSIINDRA-ATYSQDPN 227
NA SI+ ++ N
Sbjct: 149 MPNAWASILWYNMLTNNPKNVN 170
>d1j7na1 d.92.1.14 (A:27-263) Anthrax toxin lethal factor, N- and
C-terminal domains {Bacillus anthracis [TaxId: 1392]}
Length = 237
Score = 25.3 bits (55), Expect = 6.1
Identities = 16/83 (19%), Positives = 32/83 (38%)
Query: 73 VRQIVDQNSAKEGRARSRLPRFTEEEIKALKGKVSITLDSSNYYPHNATSKEDQEAAERV 132
V+ + ++P E KA+ GK+ I + ED++ + +
Sbjct: 22 VKGEEAVKKEAAEKLLEKVPSDVLEMYKAIGGKIYIVDGDITKHISLEALSEDKKKIKDI 81
Query: 133 FQFTLGLFAHPIYSEAGDYPPIV 155
+ L H +Y++ G P +V
Sbjct: 82 YGKDALLHEHYVYAKEGYEPVLV 104
>d1vlpa1 d.41.2.2 (A:1-149) Nicotinate phosphoribosyltransferase,
N-terminal domain {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 149
Score = 25.1 bits (55), Expect = 6.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 175 RFTEEEIKALKGSFDFF 191
RFTEEEI+ LK +
Sbjct: 64 RFTEEEIEYLKQEIPYL 80
>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 156
Score = 24.9 bits (53), Expect = 6.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 170 RSRLPRFTEEEIKALKGSFDFFALNH 195
++ + + TEE+ K +FD F L
Sbjct: 2 KAAVEQLTEEQKNEFKAAFDIFVLGA 27
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 62
Score = 23.5 bits (51), Expect = 7.5
Identities = 1/31 (3%), Positives = 9/31 (29%)
Query: 169 ARSRLPRFTEEEIKALKGSFDFFALNHYTSI 199
+++ + ++ + Y +
Sbjct: 2 GKNKRGVLPKHATNVMRSWLFQHIGHPYPTE 32
>d2pq7a1 a.211.1.1 (A:1-217) Predicted hydrolase mes0020 {Uncultured
thermotogales bacterium [TaxId: 221214]}
Length = 217
Score = 24.7 bits (53), Expect = 9.0
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 4/73 (5%)
Query: 10 CNIIGYTAWSILDNFEWLDGYTISQADDLRSLGSPPAGSWVPISMISKSAHPIYSETGDY 69
I +S L G + AD L ++G+ S K+ P++S +
Sbjct: 105 SKAIRSHRYSGGLTPTSLTGKILQDADRLDAIGA--VAIARVFSYSGKTGTPLHSL--QF 160
Query: 70 PPIVRQIVDQNSA 82
P + S+
Sbjct: 161 SPRSSYSGNSRSS 173
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.130 0.388
Gapped
Lambda K H
0.267 0.0448 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 903,067
Number of extensions: 40638
Number of successful extensions: 166
Number of sequences better than 10.0: 1
Number of HSP's gapped: 165
Number of HSP's successfully gapped: 52
Length of query: 241
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 158
Effective length of database: 1,268,006
Effective search space: 200344948
Effective search space used: 200344948
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 52 (24.5 bits)