BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14906
(583 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8NI36|WDR36_HUMAN WD repeat-containing protein 36 OS=Homo sapiens GN=WDR36 PE=1 SV=1
Length = 951
Score = 511 bits (1317), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/615 (41%), Positives = 372/615 (60%), Gaps = 41/615 (6%)
Query: 2 VESTPSSSSTSSNSSKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCN 61
+ + +S +S +F RALG SN +P V RF ++ TCVGK+FH Y
Sbjct: 53 IAAAMERASERRTASALFAGFRALGLFSNDIPHVVRFSALKRRFYVTTCVGKSFHTYDVQ 112
Query: 62 HFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFG 121
L++VS DI C+++D ++ + N+ A+ R +IV T+KGH + +H + PFG
Sbjct: 113 KLSLVAVSNSVPQDICCMAADGRLVFAAYGNVFSAFARNKEIVHTFKGHKAEIHFLQPFG 172
Query: 122 PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKI--------------MGKR------- 160
H+ISVD + + +W I +EE YL+L+FD FKI +G
Sbjct: 173 DHIISVDTDGILIIWHIYSEEEYLQLTFDKSVFKISAILHPSTYLNKILLGSEQGSLQLW 232
Query: 161 -------------WNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPV 207
W V L+ +P VD++ +GL + ++I+HNI +E+LM+F Q WGP+
Sbjct: 233 NVKSNKLLYTFPGWKVGVTALQQAPAVDVVAIGLMSGQVIIHNIKFNETLMKFRQDWGPI 292
Query: 208 TALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS 267
T++SFRTDG P+M +GS GH+ +W+LED+++ NQ++ AH + G FL+ EPLLVT+
Sbjct: 293 TSISFRTDGHPVMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGLTFLHREPLLVTNG 352
Query: 268 PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
DN L++WIFD G GRLLR R GHSAP I++YG + ILSA+ D TL+ F+T E
Sbjct: 353 ADNALRIWIFDGPTGEGRLLRFRMGHSAPLTNIRYYGQNGQQILSASQDGTLQSFSTVHE 412
Query: 328 TSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKV 387
NK+LG N+ +KRK M+ + LPP+++F+ ARE DW+ I A H GK
Sbjct: 413 KFNKSLGHGLINKKRVKRKGLQNTMSVR--LPPITKFAAEEARESDWDGIIACHQGKLSC 470
Query: 388 SLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHR 447
S W++ KS + FL P+ K+ + T V IT CGNF +IG SSG VD +N+QSG HR
Sbjct: 471 STWNYQKSTIGAYFLKPKELKKDDITA-TAVDITSCGNFAVIGLSSGTVDVYNMQSGIHR 529
Query: 448 GSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF 507
GS+G D H G VRGV D LNQ+ ++ G++ +K W+FK K + S+ L + +
Sbjct: 530 GSFGKDQ--AHKGSVRGVAVDGLNQLTVTTGSEGLLKFWNFKN--KILIHSVSLSSSPNI 585
Query: 508 FRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCT 567
H++S +L + LDDF+++++DI+T I+R+ SGH GQ+ D FSPD RWLI+A+MDC+
Sbjct: 586 MLLHRDSGILGLALDDFSISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISAAMDCS 645
Query: 568 IRVWDIPSSQLIDCF 582
IR WD+PS LIDCF
Sbjct: 646 IRTWDLPSGCLIDCF 660
>sp|O14053|YC47_SCHPO Uncharacterized WD repeat-containing protein C1672.07
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC1672.07 PE=4 SV=1
Length = 902
Score = 311 bits (797), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 201/605 (33%), Positives = 307/605 (50%), Gaps = 57/605 (9%)
Query: 16 SKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDD 75
S+I+ R++G+VSN +P R L T VG F Y C LL V Q + +
Sbjct: 21 SRIYAPFRSIGHVSNAVPFDIE--ARGTHFLVTTSVGNTFQTYDCEKLNLLFVGKQLDKE 78
Query: 76 ITCLSSDFFHIYTSANNIIYAWRRGIDI--VGTYKGHTSPVHLILPFGPHLISVDEESNV 133
ITCL S + +A + I+A++RG I + + H + HL FG +I+ +V
Sbjct: 79 ITCLKSFKDFMLVAAGSKIFAYKRGKIIWDIDVEQEHGTVTHLD-AFGEWIIACTSSRHV 137
Query: 134 KVW---------------------DIKA---EETYLE---LSFDNDTFKIMGKR------ 160
VW DI + TYL L F + +I R
Sbjct: 138 YVWKHASKYSVPELHTTFLPNTNADITSLLHPSTYLNKILLGFSDGALQIWNLRVSKRVH 197
Query: 161 -----WNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTD 215
+ + L +PV+D++ VG + +I++ N+ LMEF Q G V + SFRTD
Sbjct: 198 EFQEFFGDGITSLTQAPVLDVLAVGTISGRIVIFNLKNGSILMEFKQD-GQVLSCSFRTD 256
Query: 216 GPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
G P++ S + G L+ W+L R+++N AH + FL +P+LVT+ PDN+LK W
Sbjct: 257 GTPILASSNPIGDLSFWDLSKRRIQNVTYNAHFGSLPKIQFLNGQPILVTAGPDNSLKEW 316
Query: 276 IFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGI 335
IFD DG R+LR R GH PP++++FYG S ++SAA D +LR + ++ + L
Sbjct: 317 IFDSMDGAPRILRSRNGHYEPPSFVKFYGKSVHFLISAATDRSLRAVSLYQDSQSTELSQ 376
Query: 336 ASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKS 395
S + + +L E+ LP ++ S REK W+N+ H + W+ +KS
Sbjct: 377 GSV----ISKAKKLNVRPEELKLPEITALSSSNTREKYWDNVLTAHKNDSSARTWN-WKS 431
Query: 396 KMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQ 455
K ++P + +S V ++ CGNF LIG S G VD +N+QSG R S+G +
Sbjct: 432 KTLGQHVLPTSDGTSVRS----VCVSCCGNFGLIGSSKGVVDVYNMQSGIKRKSFGQSSL 487
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS 515
G V V+ DN+N+I+++ D +K W F + + S+ + + I+ S
Sbjct: 488 SGK--PVTAVMLDNVNRILVTASLDGILKFWDFNKGNL--IDSLDVGSSITHAIYQHSSD 543
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
++AV DDF + I+D+ T I+R+L GH +LT DFS RWL+TAS+D TIR WD+P+
Sbjct: 544 LVAVACDDFGIRIVDVQTRKIVRELWGHSNRLTSFDFSDTGRWLVTASLDGTIRTWDLPT 603
Query: 576 SQLID 580
LID
Sbjct: 604 GHLID 608
>sp|Q06078|UTP21_YEAST U3 small nucleolar RNA-associated protein 21 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP21 PE=1
SV=1
Length = 939
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 181/627 (28%), Positives = 297/627 (47%), Gaps = 88/627 (14%)
Query: 16 SKIFLRHRALGYVSNHLPVVARFIRRRKETLF-VTCVGKAFHVYGCNHFKLLSVSPQHE- 73
SKIF R +G VSN +P + T + VTCVGK F +Y N LL VS +
Sbjct: 21 SKIFSPFRIIGNVSNGVPFATGTL---GSTFYIVTCVGKTFQIYDANTLHLLFVSEKETP 77
Query: 74 DDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNV 133
I LS+ F ++Y + N + ++RGI+ + V + FG +L + +++++
Sbjct: 78 SSIVALSAHFHYVYAAYENKVGIYKRGIEEHLLELETDANVEHLCIFGDYLCASTDDNSI 137
Query: 134 KVW--------------------DIKAEE--------TYLE----------LSFDNDTFK 155
++ +I+ E TYL L F+ T K
Sbjct: 138 FIYKKSDPQDKYPSEFYTKLTVTEIQGGEIVSLQHLATYLNKLTVVTKSNVLLFNVRTGK 197
Query: 156 IM--GKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFR 213
++ + + EP+PV+DII +G ++I+ N+ + + +++LSFR
Sbjct: 198 LVFTSNEFPDQITTAEPAPVLDIIALGTVTGEVIMFNMRKGKRIRTIKIPQSRISSLSFR 257
Query: 214 TDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKV---VTGAHFLYNEPLLVTSSPDN 270
TDG + G+++G L ++L+ R + +K HR+ VT A FL +P++VTS DN
Sbjct: 258 TDGSSHLSVGTSSGDLIFYDLDRRSRIHVLKNIHRESYGGVTQATFLNGQPIIVTSGGDN 317
Query: 271 TLKLWIFDKADGNG---------RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRI 321
+LK ++FD + G R LR R GHS PP+YI F + S +LSA+ D +L
Sbjct: 318 SLKEYVFDPSLSQGSGDVVVQPPRYLRSRGGHSQPPSYIAFADSQSHFMLSASKDRSLWS 377
Query: 322 FNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIH 381
F+ + + ++ + S + + R+ K P + + AR +W NI H
Sbjct: 378 FSLRKDAQSQEM---SQRLHKKQDGGRVGGSTIKSKFPEIVALAIENARIGEWENIITAH 434
Query: 382 TGKNKVSLWSFYKSKM--------DDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433
+ W ++ DD F+ V ++ CGNF IG S+
Sbjct: 435 KDEKFARTWDMRNKRVGRWTFDTTDDGFV-------------KSVAMSQCGNFGFIGSSN 481
Query: 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK 493
G + +N+QSG R Y H V G+ D +N+ ++S G D V + F ++
Sbjct: 482 GSITIYNMQSGILRKKYKL-----HKRAVTGISLDGMNRKMVSCGLDGIVGFYDFNKS-- 534
Query: 494 PPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFS 553
L +KLD I+ H+ S + A+ LDD ++ +ID T ++R+L GH ++T DFS
Sbjct: 535 TLLGKLKLDAPITAMVYHRSSDLFALALDDLSIVVIDAVTQRVVRQLWGHSNRITAFDFS 594
Query: 554 PDSRWLITASMDCTIRVWDIPSSQLID 580
P+ RW+++AS+D TIR WD+P+ ID
Sbjct: 595 PEGRWIVSASLDSTIRTWDLPTGGCID 621
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 209/499 (41%), Gaps = 57/499 (11%)
Query: 106 TYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS 163
T KGH S V+ + G L S ++ V++WDI + + TFK R S
Sbjct: 901 TCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCL-------KTFKGHTSRVRS 953
Query: 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG 223
V SP ++ G S++ + L +I + E L F G V +++F DG M+ +G
Sbjct: 954 VVF----SPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGS-MLATG 1008
Query: 224 SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN 283
S + +W++ Q I + H V F + +L + S D T++LW D + GN
Sbjct: 1009 SGDQTVRLWDISSSQC-FYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLW--DISSGN 1065
Query: 284 GRLLRIREGHSAPPNYIQFYGNSSDNILSAAG--DSTLRIFNTKSET------------- 328
L +GH++ + F S D + A+G D +R+++ S
Sbjct: 1066 --CLYTLQGHTSCVRSVVF---SPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVR 1120
Query: 329 ----SNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGK 384
S + +A+ + + + R + + L + + +A D +A+ +G
Sbjct: 1121 FLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLAS-GSGD 1179
Query: 385 NKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSG 444
V LW SK ++++ Q S V G+ + G S V + I S
Sbjct: 1180 QTVRLWDISSSKC--LYIL-----QGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSS 1232
Query: 445 AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDN 503
++ GH V VV + ++ SG +D+TV++W + L + + N
Sbjct: 1233 KCLCTF-----QGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSS--KCLHTFQGHTN 1285
Query: 504 GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS 563
++ + + SMLA D TV + +I + + GH ++ FSPD L + S
Sbjct: 1286 WVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGS 1345
Query: 564 MDCTIRVWDIPSSQLIDCF 582
D T+R+W I S + + F
Sbjct: 1346 DDQTVRLWSISSGECLYTF 1364
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 196/480 (40%), Gaps = 59/480 (12%)
Query: 106 TYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS 163
T +GHTS V ++ P G L S ++ V++WDI S N + + G + S
Sbjct: 1069 TLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDI---------SSGNCLYTLQG--YTS 1117
Query: 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG 223
V L SP + G S++ + L +I + + L V A++F DG + SG
Sbjct: 1118 WVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATL-ASG 1176
Query: 224 SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN 283
S + +W++ + I + H V F + L + S D T++LW + +
Sbjct: 1177 SGDQTVRLWDISSSKCL-YILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSS--- 1232
Query: 284 GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNL 343
+ L +GH++ N + F + S + S + D T+R+++ +S+K L + N
Sbjct: 1233 -KCLCTFQGHTSWVNSVVFNPDGS-MLASGSSDKTVRLWDI---SSSKCLHTFQGHTN-- 1285
Query: 344 KRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLV 403
+N P S + G +G V LW SK F
Sbjct: 1286 -------WVNSVAFNPDGSMLASG--------------SGDQTVRLWEISSSKCLHTF-- 1322
Query: 404 PERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVR 463
Q S + V + G + G V ++I SG ++ GH V
Sbjct: 1323 -----QGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTF-----LGHTNWVG 1372
Query: 464 GVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDD 523
V+ I+ SG DQTV++W +GK +N + + ++LA DD
Sbjct: 1373 SVIFSPDGAILASGSGDQTVRLWSIS-SGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDD 1431
Query: 524 FTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
TV + +I + + L GH+ + FS D L + S D TI++WD+ + + I +
Sbjct: 1432 QTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTLK 1491
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 459 VGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLA 518
+G V V ++ +G + V+ W TGK L ++ ++ Q+ MLA
Sbjct: 864 LGSVLTVAFSPDGKLFATGDSGGIVRFWE-AATGKELLTCKGHNSWVNSVGFSQDGKMLA 922
Query: 519 VCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
DD TV + DI + ++ GH ++ FSP+S L + S D T+R+WDI S +
Sbjct: 923 SGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGEC 982
Query: 579 IDCFQ 583
+ FQ
Sbjct: 983 LYIFQ 987
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRT---HQE 513
GH V V +++ SG +DQTV++W + L++ K S R+
Sbjct: 904 GHNSWVNSVGFSQDGKMLASGSDDQTVRLWDI--SSGQCLKTFK--GHTSRVRSVVFSPN 959
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
S MLA D TV + DI + + GH G + F+ D L T S D T+R+WDI
Sbjct: 960 SLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDI 1019
Query: 574 PSSQLIDCFQ 583
SSQ FQ
Sbjct: 1020 SSSQCFYIFQ 1029
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVW--------HFKQTGKPPLRSIKLDNGISFF 508
GH G V V + ++ +G DQTV++W + Q +RS+ +
Sbjct: 988 GHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSS----- 1042
Query: 509 RTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
+ +MLA DD TV + DI + + L GH + FSPD L + D +
Sbjct: 1043 ----DGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIV 1098
Query: 569 RVWDIPSSQLIDCFQ 583
R+WDI S + Q
Sbjct: 1099 RLWDISSGNCLYTLQ 1113
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 216/550 (39%), Gaps = 72/550 (13%)
Query: 46 LFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVG 105
L + C G + N + + SP E +C + + N +++ R G+ +
Sbjct: 676 LLLICRGHS------NWVRFVVFSPDGEILASCGADE--------NVKLWSVRDGV-CIK 720
Query: 106 TYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS 163
T GH V + P G L S + +K+WDI+ L+ D W
Sbjct: 721 TLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTD--------WVR 772
Query: 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG 223
CV SP + + ++ I L ++ + L G V +++F DG + SG
Sbjct: 773 CVAF---SPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQ-TLASG 828
Query: 224 SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN 283
S + +WN + + H V + + +LV+ S D T+KLW D
Sbjct: 829 SGDRTIKIWNYHTGECL-KTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLW-----DCQ 882
Query: 284 GRL-LRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKN--------LG 334
+ ++ GH+ + F + + + D ++R++N ++ K L
Sbjct: 883 THICIKTLHGHTNEVCSVAFSPDG-QTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALP 941
Query: 335 IA-------SANRNNLKRKNRLEKMNEKFI--LPPVSQFSFGLAREKDWNNIAAIHTGKN 385
+A A+ +N K + K+I L + F +G+A D +A+ T +
Sbjct: 942 VAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASAST-DS 1000
Query: 386 KVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGA 445
V LW+ + + L A P G + G + V +NI +G
Sbjct: 1001 SVRLWNISTGQCFQILLEHTDWVYAVVFHPQ-------GKIIATGSADCTVKLWNISTGQ 1053
Query: 446 HRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPP--LRSIKLDN 503
+ H + G+ Q++ S DQ+V++W TG+ LR
Sbjct: 1054 CLKTLSE-----HSDKILGMAWSPDGQLLASASADQSVRLWDCC-TGRCVGILRGHSNRV 1107
Query: 504 GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS 563
+ F + E ++A C D TV I D ++ L+GH + D FSPD + L +AS
Sbjct: 1108 YSAIFSPNGE--IIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASAS 1165
Query: 564 MDCTIRVWDI 573
D T+R+WD+
Sbjct: 1166 HDQTVRIWDV 1175
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 132/337 (39%), Gaps = 54/337 (16%)
Query: 251 VTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSD-N 309
+ A F LL T D +++W +G+LL I GHS N+++F S D
Sbjct: 645 ILSAAFSPEGQLLATCDTDCHVRVWEVK----SGKLLLICRGHS---NWVRFVVFSPDGE 697
Query: 310 ILSAAG-DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGL 368
IL++ G D +++++ + K L + + + + F +
Sbjct: 698 ILASCGADENVKLWSVRDGVCIKTL---TGHEHEV----------------------FSV 732
Query: 369 AREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKP---TCVYITHCGN 425
A D +A+ +G + LW C Q CV + GN
Sbjct: 733 AFHPDGETLASA-SGDKTIKLWDIQDGT----------CLQTLTGHTDWVRCVAFSPDGN 781
Query: 426 FVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKV 485
+ + + +++ G + H G VR V Q + SG D+T+K+
Sbjct: 782 TLASSAADHTIKLWDVSQGKCLRTL-----KSHTGWVRSVAFSADGQTLASGSGDRTIKI 836
Query: 486 WHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMG 545
W++ TG+ I N + +S +L D T+ + D T I+ L GH
Sbjct: 837 WNY-HTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTN 895
Query: 546 QLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
++ FSPD + L S+D ++R+W+ + Q + +
Sbjct: 896 EVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAW 932
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 164/433 (37%), Gaps = 91/433 (21%)
Query: 193 TDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVT 252
+D S F +T G + + +F +G ++ + H+ VW ++ ++ I + H V
Sbjct: 631 SDLSCCVFTETLGNILSAAFSPEGQ-LLATCDTDCHVRVWEVKSGKLL-LICRGHSNWVR 688
Query: 253 GAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILS 312
F + +L + D +KLW +G ++ GH + F+ + + + S
Sbjct: 689 FVVFSPDGEILASCGADENVKLWSVR----DGVCIKTLTGHEHEVFSVAFHPDG-ETLAS 743
Query: 313 AAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREK 372
A+GD T+++++ + T + L + + +A
Sbjct: 744 ASGDKTIKLWDIQDGTCLQTL-------------------------TGHTDWVRCVAFSP 778
Query: 373 DWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS 432
D N +A+ + + LW + K R ++ V + G + G
Sbjct: 779 DGNTLAS-SAADHTIKLWDVSQGKC-------LRTLKSHTGWVRSVAFSADGQTLASGSG 830
Query: 433 SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH----- 487
+ +N +G +Y GH V + ++I++SG D+T+K+W
Sbjct: 831 DRTIKIWNYHTGECLKTY-----IGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHI 885
Query: 488 ----------------FKQTGKPPLRSIKLDNGISFF--RTHQ----------------- 512
F G+ L + LD + + RT Q
Sbjct: 886 CIKTLHGHTNEVCSVAFSPDGQT-LACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAF 944
Query: 513 --ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRV 570
+ +LA +D TV + D T I L GH + FSPDS+ L +AS D ++R+
Sbjct: 945 SPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRL 1004
Query: 571 WDIPSSQLIDCFQ 583
W+I + Q CFQ
Sbjct: 1005 WNISTGQ---CFQ 1014
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIK----LDNGISFFRTHQESSMLAVCLDDFTVN 527
QI+ SG ND+TVK+W + QTGK + S++ GI+F +S LA D +V
Sbjct: 949 QILASGSNDKTVKLWDW-QTGKY-ISSLEGHTDFIYGIAF---SPDSQTLASASTDSSVR 1003
Query: 528 IIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ +I T + L H + F P + + T S DCT+++W+I + Q +
Sbjct: 1004 LWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCL 1055
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 9/60 (15%)
Query: 526 VNIIDID------TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
VN+ D+D +C + + +G + A FSP+ + L T DC +RVW++ S +L+
Sbjct: 621 VNLHDVDFANSDLSCCVFTET---LGNILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLL 677
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 197/502 (39%), Gaps = 74/502 (14%)
Query: 89 SANNIIYAWRRGIDIVGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLE 146
S + I W R + T GH V+ + P G + S + +K+W
Sbjct: 1091 SLDKTIKLWSRDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQ--------- 1141
Query: 147 LSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGP 206
+ D K + VN + SP + S+ I L + + + LM
Sbjct: 1142 -TSDGTLLKTITGH-EQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAG 1199
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
V + F DG + +GS + +W+ +D ++ + H+ V F + L ++
Sbjct: 1200 VITVRFSPDGQ-TIAAGSEDKTVKLWHRQDGKLLKTLN-GHQDWVNSLSFSPDGKTLASA 1257
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDSTLRIFN- 323
S D T+KLW +G+L++ +GH+ + F SSD I SA+ D+T++++N
Sbjct: 1258 SADKTIKLWRI----ADGKLVKTLKGHNDSVWDVNF---SSDGKAIASASRDNTIKLWNR 1310
Query: 324 --TKSET-SNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAI 380
+ ET + + G+ + N LP +NI A
Sbjct: 1311 HGIELETFTGHSGGVYAVN-----------------FLPD--------------SNIIAS 1339
Query: 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFN 440
+ N + LW L+ A S V H G+ + + G++ ++
Sbjct: 1340 ASLDNTIRLW--------QRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWH 1391
Query: 441 IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK 500
Q G+ + PG+ + G+ ++ S D+TVK+W + GK I
Sbjct: 1392 SQDGSLLKTL-----PGN-KAIYGISFTPQGDLIASANADKTVKIWRVRD-GKALKTLIG 1444
Query: 501 LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLI 560
DN ++ + LA D TV + ++ + L GH ++ FSPD + +
Sbjct: 1445 HDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIA 1504
Query: 561 TASMDCTIRVWDIPSSQLIDCF 582
+AS D TIR+WD S LI
Sbjct: 1505 SASADKTIRLWDSFSGNLIKSL 1526
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 206/494 (41%), Gaps = 62/494 (12%)
Query: 103 IVGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKR 160
++ T GH V+ + P G +L S + ++K+WD + + + L+ +
Sbjct: 1147 LLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHS--------- 1197
Query: 161 WNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI---QTWGPVTALSFRTDGP 217
+ V + SP I G +K + L + D L++ + Q W V +LSF DG
Sbjct: 1198 --AGVITVRFSPDGQTIAAGSEDKTVKLWH-RQDGKLLKTLNGHQDW--VNSLSFSPDGK 1252
Query: 218 PMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIF 277
+ S S + +W + D ++ +K H V +F + + ++S DNT+KLW
Sbjct: 1253 -TLASASADKTIKLWRIADGKLVKTLK-GHNDSVWDVNFSSDGKAIASASRDNTIKLW-- 1308
Query: 278 DKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN----TKSETSNKNL 333
+ +G L GHS + F +S + I SA+ D+T+R++ + E N
Sbjct: 1309 ---NRHGIELETFTGHSGGVYAVNFLPDS-NIIASASLDNTIRLWQRPLISPLEVLAGNS 1364
Query: 334 G------------IASANRN-NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAI 380
G IA+A + N++ + + K + P ++ +G++ + IA+
Sbjct: 1365 GVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTL--PGNKAIYGISFTPQGDLIASA 1422
Query: 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFN 440
+ K V +W K + ++ V + G + V +N
Sbjct: 1423 NADKT-VKIWRVRDGKALKTLI-------GHDNEVNKVNFSPDGKTLASASRDNTVKLWN 1474
Query: 441 IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK 500
+ G + + GH V V +I+ S D+T+++W ++S+
Sbjct: 1475 VSDGKFKKTL-----KGHTDEVFWVSFSPDGKIIASASADKTIRLW--DSFSGNLIKSLP 1527
Query: 501 LDNGISF-FRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWL 559
N + + + + SMLA D TV + ++ SGH + + FSPD R++
Sbjct: 1528 AHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYI 1587
Query: 560 ITASMDCTIRVWDI 573
+AS D T+++W I
Sbjct: 1588 ASASEDKTVKIWQI 1601
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 105/253 (41%), Gaps = 27/253 (10%)
Query: 335 IASANRNNLKRKNRLEKMNEKFILPPV---SQFSFG-----LAREKDWNNIAAIHTGKNK 386
+A L+ KNRL++ + V + SFG RE + IAA+++ ++
Sbjct: 957 LAERKHQQLQAKNRLKQAQRAVVALSVLGIASVSFGGLAYWQGREAQFREIAALNS-SSQ 1015
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
+L S + + + K A+Q I N L ++ F +Q
Sbjct: 1016 ANLLSHQQ-----LAALIASLKAAQQVNHV---IAVPNNLKLATVTTLQQALFEMQE--- 1064
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
+ GH GV + Q + SG D+T+K+W + G+ ++ +
Sbjct: 1065 -----RNRLEGHKDGVISISISRDGQTIASGSLDKTIKLW--SRDGRLFRTLNGHEDAVY 1117
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDC 566
+ +A D T+ + T+++ ++GH + + FSPD + L +AS D
Sbjct: 1118 SVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDH 1177
Query: 567 TIRVWDIPSSQLI 579
+I++WD S QL+
Sbjct: 1178 SIKLWDTTSGQLL 1190
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 116/522 (22%), Positives = 198/522 (37%), Gaps = 111/522 (21%)
Query: 103 IVGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKR 160
++ T GH++ V + P G + + E+ VK+W + + L+ D
Sbjct: 1189 LLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQD-------- 1240
Query: 161 WNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWG-PVTALSFRTDGPPM 219
W VN L SP + ++K I L I D L++ ++ V ++F +DG +
Sbjct: 1241 W---VNSLSFSPDGKTLASASADKTIKLWRI-ADGKLVKTLKGHNDSVWDVNFSSDGKAI 1296
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW---- 275
S S + +WN +E + H V +FL + ++ ++S DNT++LW
Sbjct: 1297 -ASASRDNTIKLWNRHG--IELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPL 1353
Query: 276 ------------------IFDK-------ADGNGRLLRIREGH--SAPPNYIQFYGNS-- 306
+ D ADGN +L ++G P YG S
Sbjct: 1354 ISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAIYGISFT 1413
Query: 307 --SDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQF 364
D I SA D T++I+ + + K L + N + K+N P +
Sbjct: 1414 PQGDLIASANADKTVKIWRVRDGKALKTL---------IGHDNEVNKVN----FSPDGKT 1460
Query: 365 SFGLARE---KDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVP-----ERCKQAKQSKPT 416
+R+ K WN + GK K +L K D++F V + A K
Sbjct: 1461 LASASRDNTVKLWN----VSDGKFKKTL----KGHTDEVFWVSFSPDGKIIASASADKTI 1512
Query: 417 CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476
++ + GN + + P H V V + ++ S
Sbjct: 1513 RLWDSFSGNLI-------------------------KSLPAHNDLVYSVNFNPDGSMLAS 1547
Query: 477 GGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ-ESSMLAVCLDDFTVNIIDIDTCT 535
D+TVK+W + L + + + + + + +A +D TV I ID
Sbjct: 1548 TSADKTVKLW--RSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQID-GH 1604
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577
++ L H + A FSPD + LI+ S+D T ++W S Q
Sbjct: 1605 LLTTLPQHQAGVMSAIFSPDGKTLISGSLDTTTKIWRFDSQQ 1646
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 146/399 (36%), Gaps = 72/399 (18%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
V ++S DG + SGS + +W+ + R + H V F + + +
Sbjct: 1075 VISISISRDGQ-TIASGSLDKTIKLWSRDGRLF--RTLNGHEDAVYSVSFSPDGQTIASG 1131
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
D T+KLW +G LL+ GH N + ++ N+ SA+ D ++++++T S
Sbjct: 1132 GSDKTIKLW----QTSDGTLLKTITGHEQTVNNV-YFSPDGKNLASASSDHSIKLWDTTS 1186
Query: 327 ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNK 386
L SA ++ FS D IAA K
Sbjct: 1187 GQLLMTLTGHSAGVITVR-------------------FS------PDGQTIAAGSEDKT- 1220
Query: 387 VSLWSFYKSKM-----------DDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGH 435
V LW K+ + + P+ A S + + + L+ GH
Sbjct: 1221 VKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGH 1280
Query: 436 VDR---FNIQS-GAHRGSYGHDNQ--------------PGHVGGVRGVVSDNLNQIVISG 477
D N S G S DN GH GGV V + I+ S
Sbjct: 1281 NDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIELETFTGHSGGVYAVNFLPDSNIIASA 1340
Query: 478 GNDQTVKVWHFKQTGKP---PLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTC 534
D T+++W +P PL + ++G+ + S++A D + +
Sbjct: 1341 SLDNTIRLWQ-----RPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDG 1395
Query: 535 TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
++++ L G+ + F+P + +A+ D T+++W +
Sbjct: 1396 SLLKTLPGNKA-IYGISFTPQGDLIASANADKTVKIWRV 1433
Score = 40.4 bits (93), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 160/455 (35%), Gaps = 83/455 (18%)
Query: 89 SANNIIYAW-RRGIDIVGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYL 145
S + + W R+ ++ T GH V+ + P G L S + +K+W I +
Sbjct: 1216 SEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVK 1275
Query: 146 ELSFDNDT-----FKIMGKR------------WNS----------------CVNVLEPSP 172
L ND+ F GK WN VN L S
Sbjct: 1276 TLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIELETFTGHSGGVYAVNFLPDSN 1335
Query: 173 VVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVW 232
+ I L N + L S +E + V A+SF DG + +G++ G++ +W
Sbjct: 1336 I--IASASLDNTIRLWQRPLI--SPLEVLAGNSGVYAVSFLHDGSIIATAGAD-GNIQLW 1390
Query: 233 NLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREG 292
+ +D + + K + G F L+ +++ D T+K+W +G+ L+ G
Sbjct: 1391 HSQDGSLLKTLPG--NKAIYGISFTPQGDLIASANADKTVKIWRVR----DGKALKTLIG 1444
Query: 293 HSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLG-----------------I 335
H N + F + + SA+ D+T++++N K L I
Sbjct: 1445 HDNEVNKVNFSPDGK-TLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKII 1503
Query: 336 ASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKS 395
ASA+ + R N LP + + + D + +A+ K V LW +
Sbjct: 1504 ASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKT-VKLWRSHDG 1562
Query: 396 KMDDMFLVPERCKQAKQSKPTCVYITHCGN--FVLIGYSSGHVDRFNIQSGAHRGSYGHD 453
+ F + P YI V I GH+
Sbjct: 1563 HLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQIDGHL---------------LT 1607
Query: 454 NQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF 488
P H GV + + +ISG D T K+W F
Sbjct: 1608 TLPQHQAGVMSAIFSPDGKTLISGSLDTTTKIWRF 1642
>sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2
SV=1
Length = 1218
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 414 KPTCVYITHCGNFVLIGYSSGH-VDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472
+P + H G L Y G +DRF+ G RG + H++QP
Sbjct: 21 RPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQP---------------- 64
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532
+ +SGG+D +KVW++K T + + + I + H E+ + DD T+ I +
Sbjct: 65 LFVSGGDDYKIKVWNYK-THRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQ 123
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ T I L+GH + A F P +++AS+D T+RVWDI
Sbjct: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
V LSF P ++ S ++G + +W+ + ++ + H V G HF ++PL V+
Sbjct: 12 VKGLSFHPKRPWILAS-LHSGVIQLWDYRMGTLIDRFDE-HEGPVRGVHFHNSQPLFVSG 69
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
D +K+W + R L GH +QF+ + + I+SA+ D T+RI+N +S
Sbjct: 70 GDDYKIKVWNYK----THRCLFTLLGHLDYIRTVQFH-HENPWIVSASDDQTIRIWNWQS 124
Query: 327 ET 328
T
Sbjct: 125 RT 126
>sp|Q94A40|COPA1_ARATH Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1
SV=2
Length = 1216
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 414 KPTCVYITHCGNFVLIGYSSGH-VDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472
+P + H G L Y G +DRF+ G RG + H++QP
Sbjct: 21 RPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQP---------------- 64
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRT---HQESSMLAVCLDDFTVNI 528
+ +SGG+D +KVW++K R + L + + RT H E + DD T+ I
Sbjct: 65 LFVSGGDDYKIKVWNYKNH-----RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
Query: 529 IDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ + T + L+GH + A F P +++AS+D T+RVWDI
Sbjct: 120 WNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
V LSF P ++ S ++G + +W+ + ++ + H V G HF ++PL V+
Sbjct: 12 VKGLSFHPKRPWILAS-LHSGVIQLWDYRMGTLIDRFDE-HEGPVRGVHFHNSQPLFVSG 69
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
D +K+W + N R L GH +QF+ + I+SA+ D T+RI+N +S
Sbjct: 70 GDDYKIKVWNYK----NHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQS 124
Query: 327 ET 328
T
Sbjct: 125 RT 126
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 28/139 (20%)
Query: 473 IVISGGNDQTVKVWHF----KQTGKPPLRSIKL----------------------DNGIS 506
+V+S DQTV+VW K+T P ++L D G++
Sbjct: 149 LVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLFGGVDAIVKYVLEGHDRGVN 208
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWLITASM 564
+ H ++ DD V + ++ + L GHM ++ F +++ S
Sbjct: 209 WAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSE 268
Query: 565 DCTIRVWDIPSSQLIDCFQ 583
D +IRVWD + F+
Sbjct: 269 DKSIRVWDATKRTGLQTFR 287
>sp|Q9AUR7|COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica
GN=Os03g0711500 PE=2 SV=1
Length = 1218
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 26/167 (15%)
Query: 414 KPTCVYITHCGNFVLIGYSSGHV-DRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472
+P + H G + Y G + DRF+ G RG + H QP
Sbjct: 21 RPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQP---------------- 64
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRT---HQESSMLAVCLDDFTVNI 528
+ +SGG+D +KVW++K R + L + + RT H E + DD T+ I
Sbjct: 65 LFVSGGDDYKIKVWNYKTH-----RCLFTLHGHLDYIRTVQFHHECPWIVSASDDQTIRI 119
Query: 529 IDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+ + T + L+GH + A F P +++AS+D T+RVWDI +
Sbjct: 120 WNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDISA 166
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
V LSF P ++ S ++G + +W+ + ++ + H V G HF +PL V+
Sbjct: 12 VKGLSFHPRRPWILAS-LHSGVIQMWDYRMGTLLDRFDE-HDGPVRGVHFHATQPLFVSG 69
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
D +K+W + R L GH +QF+ + I+SA+ D T+RI+N +S
Sbjct: 70 GDDYKIKVWNYK----THRCLFTLHGHLDYIRTVQFH-HECPWIVSASDDQTIRIWNWQS 124
Query: 327 ET 328
T
Sbjct: 125 RT 126
>sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica
GN=Os03g0711400 PE=2 SV=1
Length = 1218
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 26/165 (15%)
Query: 414 KPTCVYITHCGNFVLIGYSSGHV-DRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472
+P + H G + Y G + DRF+ G RG + H QP
Sbjct: 21 RPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQP---------------- 64
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRT---HQESSMLAVCLDDFTVNI 528
+ +SGG+D +KVW++K R + L + + RT H E + DD T+ I
Sbjct: 65 LFVSGGDDYKIKVWNYKTH-----RCLFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
Query: 529 IDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ + T + L+GH + A F P +++AS+D T+RVWDI
Sbjct: 120 WNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
V LSF P ++ S ++G + +W+ + ++ + H V G HF +PL V+
Sbjct: 12 VKGLSFHPRRPWILAS-LHSGVIQMWDYRMGTLLDRFDE-HDGPVRGVHFHATQPLFVSG 69
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
D +K+W + R L GH +QF+ + I+SA+ D T+RI+N +S
Sbjct: 70 GDDYKIKVWNYK----THRCLFTLHGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQS 124
Query: 327 ET 328
T
Sbjct: 125 RT 126
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 28/139 (20%)
Query: 473 IVISGGNDQTVKVWHF----KQTGKPPLRSIKL----------------------DNGIS 506
+V+S DQTV+VW K+T P ++L D G++
Sbjct: 149 LVVSASLDQTVRVWDIGALRKKTVSPADDILRLTQMNTDLFGGVDAVVKYVLEGHDRGVN 208
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWLITASM 564
+ H ++ DD V + ++ + L GHM ++ F +++ S
Sbjct: 209 WASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSE 268
Query: 565 DCTIRVWDIPSSQLIDCFQ 583
D +IR+WD I F+
Sbjct: 269 DKSIRIWDATKRTGIQTFR 287
>sp|Q0J3D9|COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica
GN=Os09g0127800 PE=2 SV=1
Length = 1218
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 26/165 (15%)
Query: 414 KPTCVYITHCGNFVLIGYSSGHV-DRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472
+P + H G + Y G + DRF+ G RG + H QP
Sbjct: 21 RPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQP---------------- 64
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRT---HQESSMLAVCLDDFTVNI 528
+ +SGG+D +KVW++K R + L + + RT H E + DD T+ I
Sbjct: 65 LFVSGGDDYKIKVWNYKTH-----RCLFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
Query: 529 IDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ + T + L+GH + A F P +++AS+D T+RVWDI
Sbjct: 120 WNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
V LSF P ++ S ++G + +W+ + ++ + H V G HF +PL V+
Sbjct: 12 VKGLSFHPRRPWILAS-LHSGVIQMWDYRMGTLLDRFDE-HDGPVRGVHFHATQPLFVSG 69
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
D +K+W + R L GH +QF+ + I+SA+ D T+RI+N +S
Sbjct: 70 GDDYKIKVWNYK----THRCLFTLHGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQS 124
Query: 327 ET 328
T
Sbjct: 125 RT 126
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 28/139 (20%)
Query: 473 IVISGGNDQTVKVWHF----KQTGKPPLRSIKL----------------------DNGIS 506
+V+S DQTV+VW K+T P ++L D G++
Sbjct: 149 LVVSASLDQTVRVWDIGALRKKTVSPADDILRLTQMNTDLFGGVDAVVKYVLEGHDRGVN 208
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWLITASM 564
+ H ++ DD V + ++ + L GHM ++ F +++ S
Sbjct: 209 WASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSE 268
Query: 565 DCTIRVWDIPSSQLIDCFQ 583
D +IRVWD I F+
Sbjct: 269 DKSIRVWDATKRTGIQTFR 287
>sp|Q55FR9|COPA_DICDI Coatomer subunit alpha OS=Dictyostelium discoideum GN=copa PE=3
SV=1
Length = 1221
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSM 516
H G VRG+ + +SGG+D +KVW++KQ + L ++K + I H+E+
Sbjct: 50 HEGPVRGINFHMTQPLFVSGGDDYKIKVWNYKQ--RRCLFTLKGHKDYIRSVEFHREAPW 107
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ DD + I + + T I +L+GH + A F P +++AS+D TIR+WDI
Sbjct: 108 IVSSSDDMVIRIWNWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIWDI 164
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 11/163 (6%)
Query: 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS 222
S V L P I L + I L++ L +F + GPV ++F P+ VS
Sbjct: 10 SRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFHM-TQPLFVS 68
Query: 223 GSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG 282
G + + VWN + R+ +K H+ + F P +V+SS D +++W +
Sbjct: 69 GGDDYKIKVWNYKQRRCLFTLK-GHKDYIRSVEFHREAPWIVSSSDDMVIRIWNWQSRTC 127
Query: 283 NGRLLRIREGHSAPPNYIQ--FYGNSSDNILSAAGDSTLRIFN 323
L GH+ +Y+ + D ++SA+ D T+RI++
Sbjct: 128 IAEL----NGHN---HYVMSALFHPKDDLVVSASLDQTIRIWD 163
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 27/143 (18%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFK------QTGKP-----PLR-------- 497
GH V + + +V+S DQT+++W T KP P+R
Sbjct: 133 GHNHYVMSALFHPKDDLVVSASLDQTIRIWDISGLKKKMTTVKPYRENDPMRLQDELFGT 192
Query: 498 --SIKL-----DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDA 550
S++L D G+++ H + DD V + ++ I+ GH ++ A
Sbjct: 193 DISVRLSLEGHDRGVNWASFHPTQPYIVSASDDHQVKLWRMND-PIVDTFRGHYNNVSCA 251
Query: 551 DFSPDSRWLITASMDCTIRVWDI 573
F P +I+ S D TIRVWDI
Sbjct: 252 LFHPRQDLIISNSEDKTIRVWDI 274
Score = 36.2 bits (82), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 86 IYTSANNIIYAWRRGIDIVGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEET 143
+ S ++ + WR IV T++GH + V L P +IS E+ ++VWDI + T
Sbjct: 220 VSASDDHQVKLWRMNDPIVDTFRGHYNNVSCALFHPRQDLIISNSEDKTIRVWDIIKKST 279
Query: 144 YLELSFDNDTF 154
+ D+D F
Sbjct: 280 VHMIRRDHDRF 290
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 218 PMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIF 277
P +VS S+ + +W + D V+ + H V+ A F + L++++S D T+++W
Sbjct: 217 PYIVSASDDHQVKLWRMNDPIVDT--FRGHYNNVSCALFHPRQDLIISNSEDKTIRVWDI 274
Query: 278 DKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
K + IR H + + + N+ +A DS + +F + E
Sbjct: 275 IK---KSTVHMIRRDHD---RFWTLASHPNQNLFAAGHDSGMIVFKLERE 318
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 504 GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS 563
GI+F H + DD+ + + + + L GH + +F ++ W++++S
Sbjct: 56 GINF---HMTQPLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIVSSS 112
Query: 564 MDCTIRVWDIPSSQLI 579
D IR+W+ S I
Sbjct: 113 DDMVIRIWNWQSRTCI 128
>sp|Q96WV5|COPA_SCHPO Putative coatomer subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBPJ4664.04 PE=1 SV=1
Length = 1207
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 24/165 (14%)
Query: 413 SKPTCVYITHCGNFVLIGYSSGHV-DRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN 471
++P + H G L Y G + DRF+ GH G VRG+
Sbjct: 22 TQPWILTSLHNGRIQLWDYRMGTLLDRFD----------------GHDGPVRGIAFHPTQ 65
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRT---HQESSMLAVCLDDFTVNI 528
+ +SGG+D V VW++K + L S L + + R H E + C DD T+ I
Sbjct: 66 PLFVSGGDDYKVNVWNYK--SRKLLFS--LCGHMDYVRVCTFHHEYPWILSCSDDQTIRI 121
Query: 529 IDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ + I L+GH + A F P +++AS+D T+RVWDI
Sbjct: 122 WNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDI 166
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 172 PVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTV 231
P I L N +I L + L F GPV ++F P+ VSG + + V
Sbjct: 21 PTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHP-TQPLFVSGGDDYKVNV 79
Query: 232 WNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE 291
WN + R++ + H V F + P +++ S D T+++W + + + I
Sbjct: 80 WNYKSRKLLFSL-CGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRN----CIAILT 134
Query: 292 GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
GHS F+ S D I+SA+ D T+R+++
Sbjct: 135 GHSHYVMCAAFHP-SEDLIVSASLDQTVRVWD 165
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 504 GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS 563
GI+F H + DD+ VN+ + + ++ L GHM + F + W+++ S
Sbjct: 58 GIAF---HPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCS 114
Query: 564 MDCTIRVWDIPSSQLI 579
D TIR+W+ S I
Sbjct: 115 DDQTIRIWNWQSRNCI 130
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 530 DIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
++DTC GH ++ F P +++AS D TIRVWD+ + F+
Sbjct: 248 EVDTC------RGHFNNVSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQTFR 295
>sp|Q12220|UTP12_YEAST U3 small nucleolar RNA-associated protein 12 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DIP2 PE=1
SV=1
Length = 943
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 115/573 (20%), Positives = 200/573 (34%), Gaps = 127/573 (22%)
Query: 121 GPHLISVDEESNVKVWDIKAEETYLELS--FDNDTFKIMGKRWNSCVNVLEPSPVVDIIG 178
GP + +V +WDIK + +LS G + C LE D++
Sbjct: 37 GPGQLITSALEDVNIWDIKTGDLVSKLSDGLPPGASDARGAKPAECT-YLEAHKDTDLLA 95
Query: 179 VGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238
VG ++ I + ++++ L+ F +T L F G ++SGS ++ VW+L +
Sbjct: 96 VGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGT-RLISGSKDSNIIVWDLVG-E 153
Query: 239 VENQIKKAHRKVVTG---------------------------------AH------FLYN 259
V ++H+ +TG AH
Sbjct: 154 VGLYKLRSHKDSITGFWCQGEDWLISTSKDGMIKLWDLKTHQCIETHIAHTGECWGLAVK 213
Query: 260 EPLLVTSSPDNTLKLWIF----DKADGNGRLLRIREGHSAPPNY-IQFYGNSSDN---IL 311
+ LL+T+ D+ +K+W DK G + I E S I+F NSSD
Sbjct: 214 DDLLITTGTDSQVKIWKLDIENDKMGGKLTEMGIFEKQSKQRGLKIEFITNSSDKTSFFY 273
Query: 312 SAAGDSTLRIFNTKSETS---NKNLGIASANRNNLKRKNRLEKMNE---KFILPPVSQF- 364
D T+ F + E L + + + E FIL P
Sbjct: 274 IQNADKTIETFRIRKEEEIARGLKKREKRLKEKGLTEEEIAKSIKESYSSFILHPFQTIR 333
Query: 365 SFGLAREKDWNNIAA------IHTGKNKVSLWSFYKSKMDDMFLVPERCKQAK-QSKPT- 416
S + W +++ + T N + +S K D P + + Q + T
Sbjct: 334 SLYKIKSASWTTVSSSKLELVLTTSSNTIEYYSIPYEKRDPTSPAPLKTHTIELQGQRTD 393
Query: 417 ------------------------------CVYITHCGN-----------FVLIGYSSGH 435
C+ CG V++G +G
Sbjct: 394 VRSIDISDDNKLLATASNGSLKIWNIKTHKCIRTFECGYALTCKFLPGGLLVILGTRNGE 453
Query: 436 VDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK-- 493
+ F++ S + + + H + + + + +++G D+TVK W FK
Sbjct: 454 LQLFDLASSSLLDTI----EDAHDAAIWSLDLTSDGKRLVTGSADKTVKFWDFKVENSLV 509
Query: 494 --------PPLR-----SIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKL 540
P L+ +++L + I R + LA+ L D TV + +D+ L
Sbjct: 510 PGTKNKFLPVLKLHHDTTLELTDDILCVRVSPDDRYLAISLLDNTVKVFFLDSMKFYLSL 569
Query: 541 SGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
GH + D S DS+ +IT+S D I++W +
Sbjct: 570 YGHKLPVLSIDISFDSKMIITSSADKNIKIWGL 602
>sp|O54929|WSB2_MOUSE WD repeat and SOCS box-containing protein 2 OS=Mus musculus GN=Wsb2
PE=2 SV=2
Length = 404
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 430 GYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGV-VSDNLNQIVISGGNDQTVKVWHF 488
G + G + + +Q+G N GH VR + + + + I++S D+T+++W
Sbjct: 129 GLNDGQIKIWEVQTGLLL-----LNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDL 183
Query: 489 KQTGKPPLRSIKLDNG----ISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
+ GK I++ +G + + SML + +V + + + T+IRKL GH
Sbjct: 184 NKHGK----QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQ 239
Query: 545 GQLTDADFSPDSRWLITASMDCTIRVWD 572
+ DFSPDS L+TAS D ++ +WD
Sbjct: 240 SSVVSCDFSPDSALLVTASYDTSVIMWD 267
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPD-SRWLITASMDCTIRVWDI 573
+LA L+D + I ++ T ++ LSGH + D F+P S L++AS D T+R+WD+
Sbjct: 125 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDL 183
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 176 IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
I+ GL++ +I + + T L+ V LSF G ++VS S L +W+L
Sbjct: 125 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 184
Query: 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA 295
+ Q+ H + V + +L +++ + ++ LW + L+R EGH +
Sbjct: 185 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMR----SYTLIRKLEGHQS 240
Query: 296 PPNYIQFYGNSSDNILSAAGDSTLRIFN 323
F +S+ +++A+ D+++ +++
Sbjct: 241 SVVSCDFSPDSA-LLVTASYDTSVIMWD 267
Score = 33.5 bits (75), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR----THQESSMLAVCLDDFTVNI 528
I+ +G ND +K+W QTG L + L R T S +L D T+ I
Sbjct: 125 ILATGLNDGQIKIWEV-QTG---LLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRI 180
Query: 529 IDIDT-CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
D++ I+ LSGH+ + SPD L +A+ + ++ +W + S LI
Sbjct: 181 WDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLI 232
>sp|Q2KID6|PLRG1_BOVIN Pleiotropic regulator 1 OS=Bos taurus GN=PLRG1 PE=2 SV=1
Length = 513
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR---THQE 513
GH+G VR + + NQ ++G D+T+K+W +GK + L IS R
Sbjct: 201 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLA-SGK---LKLSLTGHISTVRGVIVSTR 256
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
S L C +D V D++ +IR GH+ + D P L+T S D T R+WD+
Sbjct: 257 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 316
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 14/161 (8%)
Query: 417 CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476
C+ + + + G + + +++ SG + S GH+ VRGV+ + + S
Sbjct: 208 CIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLT-----GHISTVRGVIVSTRSPYLFS 262
Query: 477 GGNDQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQESSMLAVCLDDFTVNIIDID 532
G D+ VK W + + I+ +G + H +L C D T I D+
Sbjct: 263 CGEDKQVKCWDLEYN-----KVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 317
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
T + LSGH + +IT S D TIR+WD+
Sbjct: 318 TKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 358
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ R +SGH+G + P ++W +T S D TI++WD+ S +L
Sbjct: 195 LYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKL 237
Score = 35.8 bits (81), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 114/274 (41%), Gaps = 34/274 (12%)
Query: 63 FKLLSVSPQHEDDITCLS---SDFFHIYTSANNIIYAWRRGIDIVG-TYKGHTSPVH--L 116
+KL V H + C++ + + + SA+ I W + + GH S V +
Sbjct: 193 WKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 252
Query: 117 ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDI 176
+ P+L S E+ VK WD L ++ G S V L+ P +D+
Sbjct: 253 VSTRSPYLFSCGEDKQVKCWD---------LEYNKVIRHYHGHL--SAVYGLDLHPTIDV 301
Query: 177 IGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL-- 234
+ + + ++ T S+ V + + P +++GS+ + +W+L
Sbjct: 302 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQA-AEPQIITGSHDTTIRLWDLVA 360
Query: 235 -EDRQVENQIKKAHRKVVTGA-HFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREG 292
+ R KK+ R VV H+ + + SPDN +K W F +G ++ G
Sbjct: 361 GKTRVTLTNHKKSVRAVVLHPRHYTF-----ASGSPDN-IKQWKFP----DGSFIQNLSG 410
Query: 293 HSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
H+A N + NS ++S A + T+ +++ ++
Sbjct: 411 HNAIINTLTV--NSDGVLVSGADNGTMHLWDWRT 442
>sp|Q27954|COPA_BOVIN Coatomer subunit alpha OS=Bos taurus GN=COPA PE=1 SV=1
Length = 1224
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS--IKLDNGISFFRT---HQ 512
H G VRG+ + +SGG+D +KVW++K LR L + + RT H
Sbjct: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK------LRRCLFTLLGHLDYIRTTFFHH 103
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
E + DD T+ + + + T + L+GH + A F P +++AS+D T+RVWD
Sbjct: 104 EYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 163
Query: 573 I 573
I
Sbjct: 164 I 164
Score = 39.3 bits (90), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 197 LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF 256
L +F V LSF P ++ S N G + +W+ + ++ + H V G F
Sbjct: 2 LTKFETKSARVKGLSFHPKRPWILTSLHN-GVIQLWDYRMCTLIDKFDE-HDGPVRGIDF 59
Query: 257 LYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQ--FYGNSSDNILSAA 314
+PL V+ D +K+W + R L GH +YI+ F+ + ILSA+
Sbjct: 60 HKQQPLFVSGGDDYKIKVWNYKLR----RCLFTLLGHL---DYIRTTFFHHEYPWILSAS 112
Query: 315 GDSTLRIFNTKSET 328
D T+R++N +S T
Sbjct: 113 DDQTIRVWNWQSRT 126
Score = 35.8 bits (81), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 218 PMMVSGSNTGHLTVWNL-EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWI 276
P++VSG++ + +W + E + E + H V+ A F + L++++S D ++++W
Sbjct: 218 PLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWD 277
Query: 277 FDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
K G + R H + + + N+ +A D + +F + E
Sbjct: 278 MSKRTG---VQTFRRDHD---RFWVLAAHPNLNLFAAGHDGGMIVFKLERE 322
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 53/146 (36%), Gaps = 41/146 (28%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKL---------------------------DNGI 505
+V+S DQTV+VW K L + D G+
Sbjct: 149 LVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGV 208
Query: 506 SFFRTHQESSMLAVCLDDFTVNII--------DIDTCTIIRKLSGHMGQLTDADFSPDSR 557
++ H ++ DD V I ++DTC GH ++ A F P
Sbjct: 209 NWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTC------RGHYNNVSCAVFHPRQE 262
Query: 558 WLITASMDCTIRVWDIPSSQLIDCFQ 583
+++ S D +IRVWD+ + F+
Sbjct: 263 LILSNSEDKSIRVWDMSKRTGVQTFR 288
Score = 33.1 bits (74), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 218 PMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
P ++S S+ + VWN + R + H V A F +E L+V++S D T+++W
Sbjct: 106 PWILSASDDQTIRVWNWQSRTCVC-VLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
Score = 32.7 bits (73), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 504 GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS 563
G+SF H + + L + + + D CT+I K H G + DF ++
Sbjct: 14 GLSF---HPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGG 70
Query: 564 MDCTIRVWD 572
D I+VW+
Sbjct: 71 DDYKIKVWN 79
>sp|Q9WUC8|PLRG1_RAT Pleiotropic regulator 1 OS=Rattus norvegicus GN=Plrg1 PE=2 SV=1
Length = 514
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR---THQE 513
GH+G VR + + NQ ++G D+T+K+W +GK + L IS R
Sbjct: 202 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLA-SGK---LKLSLTGHISTVRGVIVSTR 257
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
S L C +D V D++ +IR GH+ + D P L+T S D T R+WD+
Sbjct: 258 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 317
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 14/161 (8%)
Query: 417 CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476
C+ + + + G + + +++ SG + S GH+ VRGV+ + + S
Sbjct: 209 CIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLT-----GHISTVRGVIVSTRSPYLFS 263
Query: 477 GGNDQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQESSMLAVCLDDFTVNIIDID 532
G D+ VK W + + I+ +G + H +L C D T I D+
Sbjct: 264 CGEDKQVKCWDLEYN-----KVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 318
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
T + LSGH + +IT S D TIR+WD+
Sbjct: 319 TKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 359
Score = 40.8 bits (94), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ R +SGH+G + P ++W +T S D TI++WD+ S +L
Sbjct: 196 LYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKL 238
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 32/273 (11%)
Query: 63 FKLLSVSPQHEDDITCLS---SDFFHIYTSANNIIYAWRRGIDIVG-TYKGHTSPVH--L 116
+KL V H + C++ + + + SA+ I W + + GH S V +
Sbjct: 194 WKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 253
Query: 117 ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDI 176
+ P+L S E+ VK WD L ++ G S V L+ P +D+
Sbjct: 254 VSTRSPYLFSCGEDKQVKCWD---------LEYNKVIRHYHGHL--SAVYGLDLHPTIDV 302
Query: 177 IGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL-- 234
+ + + ++ T S+ V + + P +++GS+ + +W+L
Sbjct: 303 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQA-AEPQIITGSHDTTIRLWDLVA 361
Query: 235 -EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH 293
+ R KK+ R VV H L+ + SPDN +K W F +G ++ GH
Sbjct: 362 GKTRVTLTNHKKSVRAVVL--HPLHY--TFASGSPDN-IKQWKFP----DGGFIQNLSGH 412
Query: 294 SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
+A N + N+ ++S A + T+ +++ ++
Sbjct: 413 NAIINTLAV--NTDGVLVSGADNGTMHLWDWRT 443
>sp|Q8CIE6|COPA_MOUSE Coatomer subunit alpha OS=Mus musculus GN=Copa PE=1 SV=2
Length = 1224
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS--IKLDNGISFFRT---HQ 512
H G VRG+ + +SGG+D +KVW++K LR L + + RT H
Sbjct: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK------LRRCLFTLLGHLDYIRTTFFHH 103
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
E + DD T+ + + + T + L+GH + A F P +++AS+D T+RVWD
Sbjct: 104 EYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 163
Query: 573 I 573
I
Sbjct: 164 I 164
Score = 39.3 bits (90), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 197 LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF 256
L +F V LSF P ++ S N G + +W+ + ++ + H V G F
Sbjct: 2 LTKFETKSARVKGLSFHPKRPWILTSLHN-GVIQLWDYRMCTLIDKFDE-HDGPVRGIDF 59
Query: 257 LYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQ--FYGNSSDNILSAA 314
+PL V+ D +K+W + R L GH +YI+ F+ + ILSA+
Sbjct: 60 HKQQPLFVSGGDDYKIKVWNYKLR----RCLFTLLGHL---DYIRTTFFHHEYPWILSAS 112
Query: 315 GDSTLRIFNTKSET 328
D T+R++N +S T
Sbjct: 113 DDQTIRVWNWQSRT 126
Score = 35.8 bits (81), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 218 PMMVSGSNTGHLTVWNL-EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWI 276
P++VSG++ + +W + E + E + H V+ A F + L++++S D ++++W
Sbjct: 218 PLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWD 277
Query: 277 FDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
K G + R H + + + N+ +A D + +F + E
Sbjct: 278 MSKRTG---VQTFRRDHD---RFWVLAAHPNLNLFAAGHDGGMIVFKLERE 322
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 53/146 (36%), Gaps = 41/146 (28%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKL---------------------------DNGI 505
+V+S DQTV+VW K L + D G+
Sbjct: 149 LVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGV 208
Query: 506 SFFRTHQESSMLAVCLDDFTVNII--------DIDTCTIIRKLSGHMGQLTDADFSPDSR 557
++ H ++ DD V I ++DTC GH ++ A F P
Sbjct: 209 NWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTC------RGHYNNVSCAVFHPRQE 262
Query: 558 WLITASMDCTIRVWDIPSSQLIDCFQ 583
+++ S D +IRVWD+ + F+
Sbjct: 263 LILSNSEDKSIRVWDMSKRTGVQTFR 288
Score = 33.1 bits (74), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 218 PMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
P ++S S+ + VWN + R + H V A F +E L+V++S D T+++W
Sbjct: 106 PWILSASDDQTIRVWNWQSRTCVC-VLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
>sp|Q26544|WSL17_SCHMA WD repeat-containing protein SL1-17 OS=Schistosoma mansoni PE=2
SV=1
Length = 301
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 32/170 (18%)
Query: 426 FVLIGYSSGHVDRFNIQSGAHRGS------------YGHDNQPGHVGGVRGVVSDNLNQI 473
F+ G +G V+ N+Q+ GS Y D G + G+VS
Sbjct: 117 FLATGSHTGCVNMINVQTAQKEGSIQLEGKFVYXLAYISDGSKLAAGTINGLVS------ 170
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI-D 532
I +V+ F P+RS+ + +LA DD + + D+ D
Sbjct: 171 -ICDLETGSVQ---FLDGHATPVRSVSFS---------PDGRLLASASDDKQIKVFDVRD 217
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
+I L+GH G + DF+ D+R L+TAS DC++R+WD+ S + CF
Sbjct: 218 GRLVIPSLNGHKGWVVSVDFASDNRHLVTASTDCSVRIWDLASKEEKHCF 267
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 14/122 (11%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
PV ++SF DG ++ S S+ + V+++ D ++ H+ V F + LVT
Sbjct: 188 PVRSVSFSPDGR-LLASASDDKQIKVFDVRDGRLVIPSLNGHKGWVVSVDFASDNRHLVT 246
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQF----YGNSSDNILSAAGDSTLRI 321
+S D ++++W L E H + Q Y +NI+S D ++ I
Sbjct: 247 ASTDCSVRIW---------DLASKEEKHCFNTHEDQVWCARYSPQGNNIISVGDDRSIMI 297
Query: 322 FN 323
+
Sbjct: 298 YQ 299
>sp|O43660|PLRG1_HUMAN Pleiotropic regulator 1 OS=Homo sapiens GN=PLRG1 PE=1 SV=1
Length = 514
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR---THQE 513
GH+G VR + + NQ ++G D+T+K+W +GK + L IS R
Sbjct: 202 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLA-SGK---LKLSLTGHISTVRGVIVSTR 257
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
S L C +D V D++ +IR GH+ + D P L+T S D T R+WD+
Sbjct: 258 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 317
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 14/161 (8%)
Query: 417 CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476
C+ + + + G + + +++ SG + S GH+ VRGV+ + + S
Sbjct: 209 CIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLT-----GHISTVRGVIVSTRSPYLFS 263
Query: 477 GGNDQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQESSMLAVCLDDFTVNIIDID 532
G D+ VK W + + I+ +G + H +L C D T I D+
Sbjct: 264 CGEDKQVKCWDLEYN-----KVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 318
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
T + LSGH + +IT S D TIR+WD+
Sbjct: 319 TKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 359
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ R +SGH+G + P ++W +T S D TI++WD+ S +L
Sbjct: 196 LYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKL 238
Score = 35.8 bits (81), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 114/274 (41%), Gaps = 34/274 (12%)
Query: 63 FKLLSVSPQHEDDITCLS---SDFFHIYTSANNIIYAWRRGIDIVG-TYKGHTSPVH--L 116
+KL V H + C++ + + + SA+ I W + + GH S V +
Sbjct: 194 WKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 253
Query: 117 ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDI 176
+ P+L S E+ VK WD L ++ G S V L+ P +D+
Sbjct: 254 VSTRSPYLFSCGEDKQVKCWD---------LEYNKVIRHYHGHL--SAVYGLDLHPTIDV 302
Query: 177 IGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL-- 234
+ + + ++ T S+ V + + P +++GS+ + +W+L
Sbjct: 303 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQA-AEPQIITGSHDTTIRLWDLVA 361
Query: 235 -EDRQVENQIKKAHRKVVTGA-HFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREG 292
+ R KK+ R VV H+ + + SPDN +K W F +G ++ G
Sbjct: 362 GKTRVTLTNHKKSVRAVVLHPRHYTF-----ASGSPDN-IKQWKFP----DGSFIQNLSG 411
Query: 293 HSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
H+A N + NS ++S A + T+ +++ ++
Sbjct: 412 HNAIINTLTV--NSDGVLVSGADNGTMHLWDWRT 443
>sp|Q922V4|PLRG1_MOUSE Pleiotropic regulator 1 OS=Mus musculus GN=Plrg1 PE=2 SV=1
Length = 513
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR---THQE 513
GH+G VR + + NQ ++G D+T+K+W +GK + L IS R
Sbjct: 201 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLA-SGK---LKLSLTGHISTVRGVIVSTR 256
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
S L C +D V D++ +IR GH+ + D P L+T S D T R+WD+
Sbjct: 257 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDV 316
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 14/161 (8%)
Query: 417 CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476
C+ + + + G + + +++ SG + S GH+ VRGV+ + + S
Sbjct: 208 CIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLT-----GHISTVRGVIVSTRSPYLFS 262
Query: 477 GGNDQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQESSMLAVCLDDFTVNIIDID 532
G D+ VK W + + I+ +G + H +L C D T I D+
Sbjct: 263 CGEDKQVKCWDLEYN-----KVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVR 317
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
T + LSGH + +IT S D TIR+WD+
Sbjct: 318 TKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 358
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ R +SGH+G + P ++W +T S D TI++WD+ S +L
Sbjct: 195 LYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKL 237
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 114/276 (41%), Gaps = 38/276 (13%)
Query: 63 FKLLSVSPQHEDDITCLS---SDFFHIYTSANNIIYAWRRGIDIVG-TYKGHTSPVH--L 116
+KL V H + C++ + + + SA+ I W + + GH S V +
Sbjct: 193 WKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 252
Query: 117 ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDI 176
+ P+L S E+ VK WD L ++ G S V L+ P +D+
Sbjct: 253 VSTRSPYLFSCGEDKQVKCWD---------LEYNKVIRHYHGHL--SAVYGLDLHPTLDV 301
Query: 177 IGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL-- 234
+ + + ++ T S+ V + + P +++GS+ + +W+L
Sbjct: 302 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQA-AEPQIITGSHDTTIRLWDLVA 360
Query: 235 -EDRQVENQIKKAHRKVVTGAHFLYNEPLLVT---SSPDNTLKLWIFDKADGNGRLLRIR 290
+ R KK+ R VV PLL T SPDN +K W F +G ++
Sbjct: 361 GKTRVTLTNHKKSVRAVVL-------HPLLYTFASGSPDN-IKQWKFP----DGGFIQNL 408
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
GH+A N + N+ ++S A + T+ +++ ++
Sbjct: 409 SGHNAIINTLAV--NADGVLVSGADNGTMHLWDWRT 442
>sp|Q0V8J1|WSB2_BOVIN WD repeat and SOCS box-containing protein 2 OS=Bos taurus GN=WSB2
PE=2 SV=1
Length = 406
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 430 GYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGV-VSDNLNQIVISGGNDQTVKVWHF 488
G + G + + +Q+G N GH VR + + + + I++S D+T+++W
Sbjct: 131 GLNDGQIKIWEVQTGLLLL-----NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDL 185
Query: 489 KQTGKPPLRSIKLDNG----ISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
+ GK I++ +G + + SML + +V + + + T+IRKL GH
Sbjct: 186 NKHGK----QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQ 241
Query: 545 GQLTDADFSPDSRWLITASMDCTIRVWD 572
+ DFSPDS L+TAS D + +WD
Sbjct: 242 SSVVSCDFSPDSALLVTASYDTNVIMWD 269
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPD-SRWLITASMDCTIRVWDI 573
+LA L+D + I ++ T ++ LSGH + D F+P S L++AS D T+R+WD+
Sbjct: 127 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDL 185
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Query: 176 IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
I+ GL++ +I + + T L+ V LSF G ++VS S L +W+L
Sbjct: 127 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 186
Query: 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA 295
+ Q+ H + V + +L +++ + ++ LW + L+R EGH +
Sbjct: 187 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMR----SYTLIRKLEGHQS 242
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
Query: 466 VSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR----THQESSMLAVCL 521
V D I+ +G ND +K+W QTG L + L R T S +L
Sbjct: 120 VPDVSCLILATGLNDGQIKIWEV-QTG---LLLLNLSGHQDVVRDLSFTPSGSLILVSAS 175
Query: 522 DDFTVNIIDIDT-CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
D T+ I D++ I+ LSGH+ + SPD L +A+ + ++ +W + S LI
Sbjct: 176 RDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLI 234
>sp|P53621|COPA_HUMAN Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=1 SV=2
Length = 1224
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS--IKLDNGISFFRT---HQ 512
H G VRG+ + +SGG+D +KVW++K LR L + + RT H
Sbjct: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK------LRRCLFTLLGHLDYIRTTFFHH 103
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
E + DD T+ + + + T + L+GH + A F P +++AS+D T+RVWD
Sbjct: 104 EYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWD 163
Query: 573 I 573
I
Sbjct: 164 I 164
Score = 38.9 bits (89), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 197 LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF 256
L +F V LSF P ++ S N G + +W+ + ++ + H V G F
Sbjct: 2 LTKFETKSARVKGLSFHPKRPWILTSLHN-GVIQLWDYRMCTLIDKFDE-HDGPVRGIDF 59
Query: 257 LYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQ--FYGNSSDNILSAA 314
+PL V+ D +K+W + R L GH +YI+ F+ + ILSA+
Sbjct: 60 HKQQPLFVSGGDDYKIKVWNYKLR----RCLFTLLGHL---DYIRTTFFHHEYPWILSAS 112
Query: 315 GDSTLRIFNTKSET 328
D T+R++N +S T
Sbjct: 113 DDQTIRVWNWQSRT 126
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 218 PMMVSGSNTGHLTVWNL-EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWI 276
P++VSG++ + +W + E + E + H V+ A F + L++++S D ++++W
Sbjct: 218 PLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWD 277
Query: 277 FDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
K G + R H + + + N+ +A D + +F + E
Sbjct: 278 MSKRTG---VQTFRRDHD---RFWVLAAHPNLNLFAAGHDGGMIVFKLERE 322
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 53/146 (36%), Gaps = 41/146 (28%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKL---------------------------DNGI 505
+V+S DQTV+VW K L + D G+
Sbjct: 149 LVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGV 208
Query: 506 SFFRTHQESSMLAVCLDDFTVNII--------DIDTCTIIRKLSGHMGQLTDADFSPDSR 557
++ H ++ DD V I ++DTC GH ++ A F P
Sbjct: 209 NWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTC------RGHYNNVSCAVFHPRQE 262
Query: 558 WLITASMDCTIRVWDIPSSQLIDCFQ 583
+++ S D +IRVWD+ + F+
Sbjct: 263 LILSNSEDKSIRVWDMSKRTGVQTFR 288
Score = 32.3 bits (72), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 504 GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS 563
G+SF H + + L + + + D CT+I K H G + DF ++
Sbjct: 14 GLSF---HPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGG 70
Query: 564 MDCTIRVWD 572
D I+VW+
Sbjct: 71 DDYKIKVWN 79
>sp|Q9NYS7|WSB2_HUMAN WD repeat and SOCS box-containing protein 2 OS=Homo sapiens GN=WSB2
PE=2 SV=1
Length = 404
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 430 GYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGV-VSDNLNQIVISGGNDQTVKVWHF 488
G + G + + +Q+G N GH VR + + + + I++S D+T+++W
Sbjct: 129 GLNDGQIKIWEVQTGLLL-----LNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDL 183
Query: 489 KQTGKPPLRSIKLDNG----ISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
+ GK I++ +G + + SML + +V + + + T+IRKL GH
Sbjct: 184 NKHGK----QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQ 239
Query: 545 GQLTDADFSPDSRWLITASMDCTIRVWD 572
+ DFSPDS L+TAS D + +WD
Sbjct: 240 SSVVSCDFSPDSALLVTASYDTNVIMWD 267
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPD-SRWLITASMDCTIRVWDI 573
+LA L+D + I ++ T ++ LSGH + D F+P S L++AS D T+R+WD+
Sbjct: 125 VLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDL 183
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 176 IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
++ GL++ +I + + T L+ V LSF G ++VS S L +W+L
Sbjct: 125 VLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 184
Query: 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA 295
+ Q+ H + V + +L +++ + ++ LW + L+R EGH +
Sbjct: 185 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMR----SYTLIRKLEGHQS 240
Query: 296 PPNYIQFYGNSSDNILSAAGDSTLRIFN 323
F +S+ +++A+ D+ + +++
Sbjct: 241 SVVSCDFSPDSA-LLVTASYDTNVIMWD 267
Score = 33.1 bits (74), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
Query: 466 VSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR----THQESSMLAVCL 521
V D ++ +G ND +K+W QTG L + L R T S +L
Sbjct: 118 VPDVSCLVLATGLNDGQIKIWEV-QTG---LLLLNLSGHQDVVRDLSFTPSGSLILVSAS 173
Query: 522 DDFTVNIIDIDT-CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
D T+ I D++ I+ LSGH+ + SPD L +A+ + ++ +W + S LI
Sbjct: 174 RDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLI 232
>sp|Q6P1V3|WSB1_XENTR WD repeat and SOCS box-containing protein 1 OS=Xenopus tropicalis
GN=wsb1 PE=2 SV=1
Length = 422
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 51/110 (46%), Gaps = 20/110 (18%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ----------ESSMLAVCLD 522
I++S D+T++VW K G N + R HQ +SSML
Sbjct: 185 ILVSASRDKTLRVWDLKDDG----------NMMKVLRGHQNWVYCCAFSPDSSMLCSVGA 234
Query: 523 DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
V + D+D T+IRKL GH + +FSPD L TAS D + VWD
Sbjct: 235 GKAVFLWDMDKYTMIRKLDGHYNDVVACEFSPDGALLATASYDTRVYVWD 284
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
Query: 176 IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
++ GLSN +I + ++ T + L+ + V L+F DG ++VS S L VW+L+
Sbjct: 142 LLATGLSNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLK 201
Query: 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA 295
D ++ + H+ V F + +L + + LW DK ++R +GH
Sbjct: 202 DDGNMMKVLRGHQNWVYCCAFSPDSSMLCSVGAGKAVFLWDMDKY----TMIRKLDGHYN 257
Query: 296 PPNYIQFYGNSSDNILSAAGDSTLRIF 322
+F S D L A R++
Sbjct: 258 DVVACEF---SPDGALLATASYDTRVY 281
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 508 FRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPD-SRWLITASMDC 566
F+ Q+ +LA L + + I D+ T ++ L H + D F+PD S L++AS D
Sbjct: 134 FKFGQDQLLLATGLSNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDK 193
Query: 567 TIRVWDI 573
T+RVWD+
Sbjct: 194 TLRVWDL 200
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 103/480 (21%), Positives = 174/480 (36%), Gaps = 75/480 (15%)
Query: 106 TYKGHTSPVHLILPF---GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN 162
T +GH S V L + F G + S ++ +K+WD + L G W+
Sbjct: 836 TLEGHGSSV-LSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHG------GSVWS 888
Query: 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS 222
SP + + G +K I + + + G V +++F DG + S
Sbjct: 889 VAF-----SPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQ-RVAS 942
Query: 223 GSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG 282
GS+ + +W+ Q + H V F + + + S D T+K+W D A
Sbjct: 943 GSDDHTIKIWDAASGTC-TQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIW--DTA-- 997
Query: 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNN 342
+G + EGH + F + + S + D T++I++T S T +
Sbjct: 998 SGTCTQTLEGHGGSVWSVAFSPDGQ-RVASGSDDKTIKIWDTASGTCTQT---------- 1046
Query: 343 LKRKNRLEKMN---EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399
LE + + P Q A + + + +W
Sbjct: 1047 ------LEGHGGWVQSVVFSPDGQR-------------VASGSDDHTIKIWD-------- 1079
Query: 400 MFLVPERCKQAKQSKPTCVY---ITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQP 456
V C Q + V+ + G V G G + ++ SG +
Sbjct: 1080 --AVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTL-----E 1132
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESS 515
GH G V V Q V SG D T+K+W ++++ G + +
Sbjct: 1133 GHGGWVHSVAFSPDGQRVASGSIDGTIKIW--DAASGTCTQTLEGHGGWVQSVAFSPDGQ 1190
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+A D T+ I D + T + L GH G + FSPD + + + S D TI++WD S
Sbjct: 1191 RVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTAS 1250
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 241 NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI 300
Q + H V F + + + S D T+K+W D A G G + EGH +
Sbjct: 834 TQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIW--DTASGTG--TQTLEGHGGSVWSV 889
Query: 301 QFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
F + + + S + D T++I++ S T + L
Sbjct: 890 AFSPD-RERVASGSDDKTIKIWDAASGTCTQTL 921
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 104 VGTYKGHTSPVHLIL---PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKR 160
V T +GH + V+ I P+G +++ + K+WD + Y L K
Sbjct: 129 VFTLEGHKNVVYAIAFNNPYGDKIVTGSFDKTCKLWDAYTGQLYYTL-----------KG 177
Query: 161 WNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMM 220
+ + L +P II G + L ++ T + + +L F T G ++
Sbjct: 178 HQTEIVCLSFNPQSTIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNTGGD-LI 236
Query: 221 VSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA 280
V+GS +W++ Q + + HR V+ F Y L+V+ S D T +LW
Sbjct: 237 VTGSFDHDSRLWDVRTGQCVH-VLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDVR-- 293
Query: 281 DGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
+GR L +++GH+ + F + ++SA+ D + R+++T
Sbjct: 294 --SGRCLSVKQGHTDEVLDVAF-DAAGTKMVSASADGSARLYHT 334
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 14/149 (9%)
Query: 448 GSYGHDNQ-------------PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP 494
GS+ HD++ GH G V + +V+SG D T ++W +
Sbjct: 239 GSFDHDSRLWDVRTGQCVHVLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDVRSGRCL 298
Query: 495 PLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSP 554
++ D + + M++ D + + T L GH G+++ F+P
Sbjct: 299 SVKQGHTDEVLDVAFDAAGTKMVSASADG-SARLYHTLTGVCQHTLVGHEGEISKVAFNP 357
Query: 555 DSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
LITAS D T R+WD + + + +
Sbjct: 358 QGTRLITASSDKTCRLWDCDTGECLQVLE 386
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532
I+ +G D T K+W +TG+ I + ++ D + D+
Sbjct: 193 IIATGSMDNTAKLWDV-ETGQERATLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRLWDVR 251
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
T + LSGH G+++ F+ +++ S+DCT R+WD+ S + + Q
Sbjct: 252 TGQCVHVLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDVRSGRCLSVKQ 302
Score = 40.8 bits (94), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 455 QPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQES 514
+ GH V V D ++S D + +++H TG + + IS + +
Sbjct: 301 KQGHTDEVLDVAFDAAGTKMVSASADGSARLYH-TLTGVCQHTLVGHEGEISKVAFNPQG 359
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ L D T + D DT ++ L GH ++ F+ + ++IT S D T R+W
Sbjct: 360 TRLITASSDKTCRLWDCDTGECLQVLEGHTDEIFSCAFNYEGDFIITGSKDNTCRIW 416
Score = 39.7 bits (91), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Query: 457 GHVGGVRGVVSDN-LNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS 515
GH V + +N +++G D+T K+W TG+ I + +S+
Sbjct: 134 GHKNVVYAIAFNNPYGDKIVTGSFDKTCKLWD-AYTGQLYYTLKGHQTEIVCLSFNPQST 192
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
++A D T + D++T L+GH ++ F+ ++T S D R+WD+ +
Sbjct: 193 IIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRLWDVRT 252
Query: 576 SQLI 579
Q +
Sbjct: 253 GQCV 256
Score = 37.0 bits (84), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 475 ISGGNDQTVKVWHFKQTGKPPLRSIKLDN---GISFFRTHQESSMLAVCLDDFTVNIIDI 531
I+G D+T KVW+ TG+ N I+F + + + D T + D
Sbjct: 110 ITGSYDRTCKVWN-TFTGEEVFTLEGHKNVVYAIAFNNPYGDKIVTGSF--DKTCKLWDA 166
Query: 532 DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577
T + L GH ++ F+P S + T SMD T ++WD+ + Q
Sbjct: 167 YTGQLYYTLKGHQTEIVCLSFNPQSTIIATGSMDNTAKLWDVETGQ 212
Score = 33.5 bits (75), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
MVS S G +++ ++ + H ++ F L+T+S D T +LW D
Sbjct: 320 MVSASADGSARLYHTLTGVCQHTLV-GHEGEISKVAFNPQGTRLITASSDKTCRLWDCD- 377
Query: 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
G L++ EGH+ F D I++ + D+T RI+ + +S
Sbjct: 378 ---TGECLQVLEGHTDEIFSCAF-NYEGDFIITGSKDNTCRIWKALTASSQ 424
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH + V+ + +++S D T+K+W + +TG + + Q+ +
Sbjct: 104 GHRSPITRVLFHPVYSVMVSASEDATIKIWDY-ETGDFERTLKGHTDAVQDVSFDQQGKL 162
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA C D T+ + D T I+ + GH ++ F P+ +LI+AS D TI++W++ +
Sbjct: 163 LASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWELATG 222
Query: 577 QLIDCF 582
+ F
Sbjct: 223 YCVKTF 228
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 126/355 (35%), Gaps = 71/355 (20%)
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
+MVS S + +W+ E E +K H V F LL + S D T+KLW F
Sbjct: 120 VMVSASEDATIKIWDYETGDFERTLK-GHTDAVQDVSFDQQGKLLASCSADMTIKLWDFQ 178
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
+ ++ GH + + F N D ++SA+ D T++++ + G
Sbjct: 179 TFEN----IKTMHGHDHNVSSVHFMPN-GDFLISASRDKTIKMWELAT-------GYCVK 226
Query: 339 NRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMD 398
+ R ++N+ L + + + K L ++ ++
Sbjct: 227 TFTGHREWVRTVRVNQDGSL-------LASCSNDQTVRVWVVANKECKAEL-REHEHVVE 278
Query: 399 DMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPG 457
+ PE C G F+L G + ++I +G + GHDN
Sbjct: 279 CIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGSRDKTIKMWDISTGVCIMTLVGHDNW-- 336
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSML 517
VRGVV + +IS +D+T++VW +K
Sbjct: 337 ----VRGVVWHPGGKYIISASDDKTIRVWDYKNK-------------------------- 366
Query: 518 AVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
C + L H T DF + ++IT S+D T++VW+
Sbjct: 367 ---------------RCQ--KTLEAHQHFCTSIDFHRSAPYVITGSVDQTVKVWE 404
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 83/207 (40%), Gaps = 22/207 (10%)
Query: 84 FHIYTSANNIIYAWRRGID-IVGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKA 140
F I S + I W V T+ GH V + G L S + V+VW +
Sbjct: 204 FLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVWVVAN 263
Query: 141 EETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV------------GLSNKKIIL 188
+E EL + + SC V +++G G +K I +
Sbjct: 264 KECKAELREHEHVVECIAWAPESC-----NGHVSEVMGAEKKGRSGPFLLSGSRDKTIKM 318
Query: 189 HNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHR 248
+I T +M + V + + G ++S S+ + VW+ ++++ + ++ AH+
Sbjct: 319 WDISTGVCIMTLVGHDNWVRGVVWHPGGK-YIISASDDKTIRVWDYKNKRCQKTLE-AHQ 376
Query: 249 KVVTGAHFLYNEPLLVTSSPDNTLKLW 275
T F + P ++T S D T+K+W
Sbjct: 377 HFCTSIDFHRSAPYVITGSVDQTVKVW 403
Score = 41.2 bits (95), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 106/277 (38%), Gaps = 60/277 (21%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDND-----TFKIMGKRW 161
GH SP+ +L P ++S E++ +K+WD + + L D +F GK
Sbjct: 104 GHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLL 163
Query: 162 NSC--------------------------VNVLEPSPVVDIIGVGLSNKKIILHNILTDE 195
SC V+ + P D + +K I + + T
Sbjct: 164 ASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWELATGY 223
Query: 196 SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKK---------- 245
+ F V + DG ++ S SN + VW + +++ + ++++
Sbjct: 224 CVKTFTGHREWVRTVRVNQDG-SLLASCSNDQTVRVWVVANKECKAELREHEHVVECIAW 282
Query: 246 ------AHRKVVTGAHFL-YNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPN 298
H V GA + P L++ S D T+K+W G + GH N
Sbjct: 283 APESCNGHVSEVMGAEKKGRSGPFLLSGSRDKTIKMWDI----STGVCIMTLVGHD---N 335
Query: 299 YIQ--FYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
+++ + I+SA+ D T+R+++ K++ K L
Sbjct: 336 WVRGVVWHPGGKYIISASDDKTIRVWDYKNKRCQKTL 372
Score = 40.8 bits (94), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 9/125 (7%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL----DNGISFFRTHQ 512
GH V+ V D +++ S D T+K+W F+ +IK D+ +S
Sbjct: 146 GHTDAVQDVSFDQQGKLLASCSADMTIKLWDFQ-----TFENIKTMHGHDHNVSSVHFMP 200
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
L D T+ + ++ T ++ +GH + + D L + S D T+RVW
Sbjct: 201 NGDFLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVWV 260
Query: 573 IPSSQ 577
+ + +
Sbjct: 261 VANKE 265
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 99/250 (39%), Gaps = 23/250 (9%)
Query: 89 SANNIIYAWR-RGIDIVGTYKGH---TSPVHLILPFGPHLISVDEESNVKVWDIKAEETY 144
SA+ I W + + + T GH S VH +P G LIS + +K+W++ Y
Sbjct: 167 SADMTIKLWDFQTFENIKTMHGHDHNVSSVHF-MPNGDFLISASRDKTIKMWELAT--GY 223
Query: 145 LELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTW 204
+F + R N ++L + V + K + E ++E I W
Sbjct: 224 CVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVWVVANKECKAELREHEHVVECI-AW 282
Query: 205 GP---------VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAH 255
P V + P ++SGS + +W++ V H V G
Sbjct: 283 APESCNGHVSEVMGAEKKGRSGPFLLSGSRDKTIKMWDI-STGVCIMTLVGHDNWVRGVV 341
Query: 256 FLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG 315
+ ++++S D T+++W + N R + E H I F+ S+ +++ +
Sbjct: 342 WHPGGKYIISASDDKTIRVWDYK----NKRCQKTLEAHQHFCTSIDFH-RSAPYVITGSV 396
Query: 316 DSTLRIFNTK 325
D T++++ +
Sbjct: 397 DQTVKVWECR 406
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532
+IS D+T+K+W TG + R +Q+ S+LA C +D TV + +
Sbjct: 204 FLISASRDKTIKMWEL-ATGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVWVVA 262
Query: 533 TCTIIRKLSGHMGQLTDADFSPDS------------------RWLITASMDCTIRVWDIP 574
+L H + ++P+S +L++ S D TI++WDI
Sbjct: 263 NKECKAELREHEHVVECIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGSRDKTIKMWDIS 322
Query: 575 SSQLI 579
+ I
Sbjct: 323 TGVCI 327
>sp|Q9Y6I7|WSB1_HUMAN WD repeat and SOCS box-containing protein 1 OS=Homo sapiens GN=WSB1
PE=1 SV=1
Length = 421
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 20/110 (18%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ----------ESSMLAVCLD 522
I++S D+T++VW K G N + R HQ +SSML
Sbjct: 185 ILVSASRDKTLRVWDLKDDG----------NMMKVLRGHQNWVYSCAFSPDSSMLCSVGA 234
Query: 523 DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
V + ++D T+IRKL GH + DFSPD L TAS D + +WD
Sbjct: 235 SKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALLATASYDTRVYIWD 284
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Query: 176 IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
++ GL+N +I + ++ T + L+ + V L+F DG ++VS S L VW+L+
Sbjct: 142 LLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLK 201
Query: 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA 295
D ++ + H+ V F + +L + + LW DK ++R EGH
Sbjct: 202 DDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYT----MIRKLEGHHH 257
Query: 296 PPNYIQFYGNSSDNILSAAGDSTLRIF 322
F S D L A R++
Sbjct: 258 DVVACDF---SPDGALLATASYDTRVY 281
>sp|A8NEG8|LIS1_COPC7 Nuclear distribution protein PAC1 OS=Coprinopsis cinerea (strain
Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=PAC1
PE=3 SV=3
Length = 434
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 21/143 (14%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP--PLR----------------- 497
GH VR V+ ++ SG DQTV++W TG+P LR
Sbjct: 233 GHSEWVRCVIPSADGTMLASGSKDQTVRLWD-PLTGEPKSELRGHENDVEAVAFAPISAY 291
Query: 498 -SIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDS 556
+I+ GI RT + LA D TV + D T +IR L+GH + F P
Sbjct: 292 AAIRELAGIPNDRTKRHGLFLASGARDKTVKLWDTQTGQMIRNLAGHDNWVRALAFHPSG 351
Query: 557 RWLITASMDCTIRVWDIPSSQLI 579
++L+++S D T+RVW++ + + +
Sbjct: 352 KYLLSSSDDKTVRVWELSTGRCL 374
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 493 KPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADF 552
+ PL SI H + S+LA +D TV I D +T R L GH + D DF
Sbjct: 108 RAPLTSIAF---------HPQYSILASASEDTTVKIWDWETGEFERTLKGHTKPVNDLDF 158
Query: 553 SPDSRWLITASMDCTIRVWD 572
L+T S D I++WD
Sbjct: 159 DHKGHLLVTCSSDLFIKIWD 178
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH V + D+ ++++ +D +K+W + K + D+ +S R +
Sbjct: 148 GHTKPVNDLDFDHKGHLLVTCSSDLFIKIWDSQNEWKNTKTFVGHDHAVSAVRFMPGDQL 207
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI--- 573
+ D T+ + D+ + +R LSGH + S D L + S D T+R+WD
Sbjct: 208 IVSASRDRTIRVFDVASTHQVRTLSGHSEWVRCVIPSADGTMLASGSKDQTVRLWDPLTG 267
Query: 574 -PSSQL 578
P S+L
Sbjct: 268 EPKSEL 273
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 119/301 (39%), Gaps = 49/301 (16%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264
P+T+++F ++ S S + +W+ E + E +K H K V F + LLV
Sbjct: 109 APLTSIAFHPQYS-ILASASEDTTVKIWDWETGEFERTLK-GHTKPVNDLDFDHKGHLLV 166
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
T S D +K+W N + GH + ++F I+SA+ D T+R+F+
Sbjct: 167 TCSSDLFIKIWDSQNEWKNTKTF---VGHDHAVSAVRFMPGDQ-LIVSASRDRTIRVFDV 222
Query: 325 KSETSNKNLG---------IASANRNNLK--RKNRLEKMNEKFILPPVSQFSFGLAREKD 373
S + L I SA+ L K++ ++ + P S+ E D
Sbjct: 223 ASTHQVRTLSGHSEWVRCVIPSADGTMLASGSKDQTVRLWDPLTGEPKSELR---GHEND 279
Query: 374 WNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433
+A + S Y + + + +R K+ G F+ G
Sbjct: 280 VEAVA--------FAPISAYAAIRELAGIPNDRTKR-------------HGLFLASGARD 318
Query: 434 GHVDRFNIQSGAH-RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG 492
V ++ Q+G R GHDN VR + + ++S +D+TV+VW TG
Sbjct: 319 KTVKLWDTQTGQMIRNLAGHDNW------VRALAFHPSGKYLLSSSDDKTVRVWEL-STG 371
Query: 493 K 493
+
Sbjct: 372 R 372
Score = 39.3 bits (90), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 12/129 (9%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVW-----HFKQTGKPPLRSIKLDNGISFFRTH 511
GH + + I+ S D TVK+W F++T K + + N + F
Sbjct: 106 GHRAPLTSIAFHPQYSILASASEDTTVKIWDWETGEFERTLKGHTKPV---NDLDF---D 159
Query: 512 QESSMLAVCLDDFTVNIIDI-DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRV 570
+ +L C D + I D + + GH ++ F P + +++AS D TIRV
Sbjct: 160 HKGHLLVTCSSDLFIKIWDSQNEWKNTKTFVGHDHAVSAVRFMPGDQLIVSASRDRTIRV 219
Query: 571 WDIPSSQLI 579
+D+ S+ +
Sbjct: 220 FDVASTHQV 228
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 21/130 (16%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ---- 512
GH+ V V + + +G D+TV++W +Q N + F H+
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-----------GNSVRLFTGHRGPVL 472
Query: 513 ------ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDC 566
LA +D + + D+ + T+ ++L GH +T FSPDS + +ASMD
Sbjct: 473 SLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDN 532
Query: 567 TIRVWDIPSS 576
++RVWDI S+
Sbjct: 533 SVRVWDIRST 542
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH V V + SG +D+T ++W F +T + + L + + + H S+
Sbjct: 382 GHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLAD-VDCVKFHPNSNY 440
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA D TV + +R +GH G + FSP+ ++L +A D +++WD+ S
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 577 QLI 579
L
Sbjct: 501 TLF 503
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 107 YKGHTSPVHL--ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSC 164
Y+GH PV I PF + S + ++W + TY +I
Sbjct: 380 YQGHAYPVWDVDISPFSLYFASGSHDRTARLWSF--DRTY--------PLRIYAGHLAD- 428
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS 224
V+ ++ P + + G ++K + L + S+ F GPV +LSF +G + +G
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGE 488
Query: 225 NTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK----- 279
+ L +W+L + ++ + H +T F + L+ ++S DN++++W
Sbjct: 489 DQ-RLKLWDLASGTLFKEL-RGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNT 546
Query: 280 -ADG-NGRLLRIREGHSAPPNYIQF 302
ADG +G L+ + G + +QF
Sbjct: 547 PADGSSGELVGVYTGQMSNVLSVQF 571
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
++++ +G ++ +K+W LRS KL + H ++S + + D +
Sbjct: 280 SKLLAAGFDNSCIKLWS--------LRSKKLKSEPH----HVDTSRIRLACDTLEEEENE 327
Query: 531 ID-TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
D T T ++ L GH G + F DS L++ S D +IR WD+ S
Sbjct: 328 EDNTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS 373
Score = 37.4 bits (85), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
SGS+ +W+ DR +I H V F N L T S D T++LW
Sbjct: 399 FASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLW---- 453
Query: 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
+ G +R+ GH P + F N + SA D L++++ S T K L
Sbjct: 454 SAQQGNSVRLFTGHRGPVLSLSFSPNGK-YLASAGEDQRLKLWDLASGTLFKEL 506
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+SS L C +D ++ D+ + T GH + D D SP S + + S D T R+W
Sbjct: 353 DSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLW 411
>sp|Q54S79|WDR3_DICDI WD repeat-containing protein 3 homolog OS=Dictyostelium discoideum
GN=wdr3 PE=3 SV=1
Length = 942
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 424 GNF-VLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482
GN V++G +G ++ F + S A S H G V +V + V SGG D+
Sbjct: 446 GNLHVIVGTKTGTIEVFELASAARVASI-----KAHEGSVWSLVLTPDLRGVTSGGADKL 500
Query: 483 VKVWHFKQTGKPP-----------LRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531
VK W F+ +++K+++ + + ++ LAV L D TV I
Sbjct: 501 VKFWDFELIASQENSKHKVLNLSLTKTLKVESDVLALKYSADNKFLAVSLLDNTVKIFYT 560
Query: 532 DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
DT L GH + D S DS +IT S D I++W +
Sbjct: 561 DTVKFHLSLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGL 602
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 379 AIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDR 438
AI ++S+W K ++ L E K ++ T V ++ G + GYS G +
Sbjct: 31 AITGCGERISIWDLRKQVLNQS-LYEEDIK----AEVTNVCLSKDGALLASGYSDGSIRI 85
Query: 439 FNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF-KQTGKPPLR 497
+++ + + GH G V + + L I++SG D V VW ++G LR
Sbjct: 86 WSMSDYQLQAVFN-----GHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLR 140
Query: 498 SIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSR 557
+ + I+ + + S+ L D + I D +T I+ + GH + D +PD
Sbjct: 141 GHR--DQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDET 198
Query: 558 WLITASMDCTIRVWDIPSSQ 577
L + + D IR W IPS++
Sbjct: 199 RLCSCTSDNQIRFWRIPSNE 218
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 165/417 (39%), Gaps = 62/417 (14%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264
G VT ++F G ++VSGS + VW++ +++ HR +T L L+
Sbjct: 102 GSVTTMTFNRLGN-ILVSGSKDTEVIVWDIITESGLFRLR-GHRDQITSVKLLERSNHLI 159
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
TSS D +K+W + ++ GH P I + + + S D+ +R +
Sbjct: 160 TSSKDGFIKIWDTE----TQHCIQTIVGHRNPIWGIDVNPDET-RLCSCTSDNQIRFWRI 214
Query: 325 KSETSNKNLG------------IASA-------NRNNLKRK----------NRLEKMNEK 355
S + G I SA N + K++ + LE ++E+
Sbjct: 215 PSNERQREDGSGIEPKFIVNTPINSAVIIPDEINEDGSKKENSNNSNNNDIDDLEIISEE 274
Query: 356 FILP-----PVSQFSFGLAREKDWNNIAAIHTGKNKVSLWS---FYKSKMDDMFLVPE-R 406
V S R N I A+ + V L+ + K++++ +V E R
Sbjct: 275 EFAKYYGSITVKAESVSGVRFDPTNKILAVQSTGKFVDLFKITHYDTMKLEEISIVEEMR 334
Query: 407 CKQAKQSKPTCVY------ITHCGNFVLIGYSSGHVDRFNIQS-----GAHRGSYGHDNQ 455
+Q ++ + I H FV I + ++ + I+ GA S D Q
Sbjct: 335 HRQTIKTSSKVRFFSFGNDIKHWNKFV-ITLAGNSLEAYEIKEKEQGGGAFEVSSTLD-Q 392
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS 515
GH +R + + +Q+++S + ++VKVW+ K +RSI D G+
Sbjct: 393 AGHRSDIRSLSLSSNDQMLVSTSS-ESVKVWNMKSLS--CIRSIACDYGLCTVFAPGNLH 449
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ V T+ + ++ + + + H G + +PD R + + D ++ WD
Sbjct: 450 VI-VGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWD 505
Score = 33.5 bits (75), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
PV L +D ++++GS ++ +W L+ AH + F+ + ++
Sbjct: 575 PVMCLDI-SDDSTLIITGSADKNIKIWGLDYGDCHKSFF-AHDDSIMQVSFIPSTHHFIS 632
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
+S D +K W DK + ++ E H + G+ D +S + D ++RIFN +
Sbjct: 633 ASKDKRIKYWDADKFEH----IQTIEAHHGEVWSLAM-GSVGDFFISGSHDRSIRIFN-Q 686
Query: 326 SET 328
+ET
Sbjct: 687 TET 689
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL----DNGISFFRTHQ 512
GH V V ++ ++V++G T+K++ + P + ++ N I H
Sbjct: 57 GHTSPVDSVKFNSSEELVVAGSQSGTMKIYDLE-----PAKIVRTLTGHRNSIRCMDFHP 111
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+A D V + D+ I GH Q+ FSPD +WL+TAS D TI++WD
Sbjct: 112 FGEFVASGSTDTNVKLWDVRRKGCIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWD 171
Query: 573 IPSSQLIDCFQ 583
+ +L F+
Sbjct: 172 LTMGKLFQEFK 182
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESS 515
GH +R + + V SG D VK+W ++ G + + K + ++ + +
Sbjct: 99 GHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGC--IYTYKGHSDQVNMIKFSPDGK 156
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
L +D T+ + D+ + ++ H G +T +F P+ L + S D T++ WD+ +
Sbjct: 157 WLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHPNEFLLASGSSDRTVQFWDLET 216
Query: 576 SQLI 579
QL+
Sbjct: 217 FQLV 220
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 108/266 (40%), Gaps = 30/266 (11%)
Query: 72 HEDDITCLS----SDFFHIYTSANNIIYAWRRGI-DIVGTYKGHTSPVHLI-LPFGPHLI 125
H ++ CL+ S + + + W G + + + GHTSPV + L+
Sbjct: 15 HSSNVNCLALGPMSGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKFNSSEELV 74
Query: 126 SVDEES-NVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNK 184
+S +K++D++ + L+ ++ + M P + + G ++
Sbjct: 75 VAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFH-----------PFGEFVASGSTDT 123
Query: 185 KIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK 244
+ L ++ + + V + F DG +V+ S + +W+L ++ + K
Sbjct: 124 NVKLWDVRRKGCIYTYKGHSDQVNMIKFSPDGK-WLVTASEDTTIKLWDLTMGKLFQEFK 182
Query: 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304
H VTG F NE LL + S D T++ W + +L+ ++ I F+
Sbjct: 183 N-HTGGVTGIEFHPNEFLLASGSSDRTVQFWDLE----TFQLVSSTSPGASAVRSISFHP 237
Query: 305 N------SSDNILSAAGDSTLRIFNT 324
+ SS ++L A G +R F+T
Sbjct: 238 DGSYLFCSSQDMLHAFGWEPIRCFDT 263
>sp|Q8BHB4|WDR3_MOUSE WD repeat-containing protein 3 OS=Mus musculus GN=Wdr3 PE=2 SV=1
Length = 942
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 87/209 (41%), Gaps = 24/209 (11%)
Query: 375 NNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG 434
+NIA + + + +W+ +S + + +P C+ A C + V+IG +G
Sbjct: 425 DNIAVLSAAADSIKIWN--RSTLQCIRTMP--CEYA-----LCSFFVPGDRQVVIGTKTG 475
Query: 435 HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF------ 488
++ +++ SG + H G + + + ++GG D+ VK W F
Sbjct: 476 NLQLYDLASGTLLETIA-----AHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDK 530
Query: 489 ----KQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
K+ R+++LD + +LAV L D TV + +DT L GH
Sbjct: 531 NSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKVFYVDTLKFFLSLYGHK 590
Query: 545 GQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ D S D + T S D +++W +
Sbjct: 591 LPVLCMDISHDGALIATGSADRNVKIWGL 619
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 8/173 (4%)
Query: 409 QAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSD 468
Q + + TC+ + G + +GY G + F++ SG ++ GH V + D
Sbjct: 62 QGNKQEVTCLCPSPDGLHLAVGYEDGAIRIFSLLSGEGNITFN-----GHKAAVTSLKYD 116
Query: 469 NLNQIVISGGNDQTVKVWH-FKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVN 527
L + SG D V +W ++G L+ K + ++ +E ++L D V
Sbjct: 117 QLGGRLASGSKDTDVIIWDVINESGLYRLKGHK--DAVTQALFLRERNLLVTSGKDTMVK 174
Query: 528 IIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLID 580
D+D + + GH ++ + + LIT + D +R WDI Q ID
Sbjct: 175 WWDLDNQHCFKTMVGHRTEVWGLVLVSEEKRLITGAADSELRAWDIDYLQEID 227
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 27/225 (12%)
Query: 103 IVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN 162
++G+ KG+ V L G + ++V +V +WD++ E L L +
Sbjct: 18 LIGSQKGNIVFVTLRGEKGRY-VAVPACEHVFIWDLRKGEKILILQGNKQE--------- 67
Query: 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS 222
V L PSP + VG + I + ++L+ E + F VT+L + G + S
Sbjct: 68 --VTCLCPSPDGLHLAVGYEDGAIRIFSLLSGEGNITFNGHKAAVTSLKYDQLGG-RLAS 124
Query: 223 GSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG 282
GS + +W++ + ++K H+ VT A FL LLVTS D +K W D
Sbjct: 125 GSKDTDVIIWDVINESGLYRLK-GHKDAVTQALFLRERNLLVTSGKDTMVKWWDLD---- 179
Query: 283 NGRLLRIREGHSAPPNYIQFYG----NSSDNILSAAGDSTLRIFN 323
N + GH + +G + +++ A DS LR ++
Sbjct: 180 NQHCFKTMVGHRT-----EVWGLVLVSEEKRLITGAADSELRAWD 219
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532
++ +G D+ VK+W G D+ + + R +S + D + D D
Sbjct: 604 LIATGSADRNVKIWGL-DFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWDAD 662
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
I+ L GH ++ SP ++++AS D ++R+W+ LI
Sbjct: 663 KFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWERTREPLI 709
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH + + + V SG D +K+W ++ G R + R +
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCV-FRYRGHSQAVRCLRFSPDGKW 161
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA DD TV + D+ ++ + GH G + +F P+ L + S D TIR WD+
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF 221
Query: 577 QLIDCFQ 583
Q++ C +
Sbjct: 222 QVVSCIE 228
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 21/228 (9%)
Query: 102 DIVGTYKGHTSPVHLILPFGPH--LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGK 159
+ + + GHTSPV + P +++ + +++VWD++A + L MG
Sbjct: 54 NCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL---------MGH 104
Query: 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPM 219
+ N C L+ P + + G + I L +I + + V L F DG
Sbjct: 105 KANICS--LDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK-W 161
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
+ S ++ + +W+L ++ ++ H V F NE LL + S D T++ W +K
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFP-GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
+++ EG P + F N L + +LR++ + E
Sbjct: 221 F----QVVSCIEGEPGPVRSVLF--NPDGCCLYSGCQDSLRVYGWEPE 262
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESS 515
GH V V + +++++G +++VW + LR++ I H
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI--LRTLMGHKANICSLDFHPYGE 118
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+A D + + DI + + GH + FSPD +WL +A+ D T+++WD+ +
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 576 SQLIDCF 582
+++ F
Sbjct: 179 GKMMSEF 185
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Query: 472 QIVISGGNDQTVKVWHFKQ-------TG-KPPLRSIKLDNGISFFRTHQESSMLAVCLDD 523
+++ +GG+D V +W + TG P+ S++L+ +S
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG-------- 85
Query: 524 FTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
++ + D++ I+R L GH + DF P ++ + S D I++WDI
Sbjct: 86 -SIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+LA DD VN+ I+ I L+GH + + ++ S +IRVWD+ +
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 576 SQLI 579
++++
Sbjct: 95 AKIL 98
>sp|O54927|WSB1_MOUSE WD repeat and SOCS box-containing protein 1 OS=Mus musculus GN=Wsb1
PE=1 SV=1
Length = 421
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 20/117 (17%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ----------ESSMLAVCLD 522
+++S D+T++VW K G N + R HQ + SML
Sbjct: 185 LLVSASRDKTLRVWDLKDDG----------NMVKVLRAHQNWVYSCAFSPDCSMLCSVGA 234
Query: 523 DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
V + ++D T+IRKL GH + DFSPD L TAS D + VWD + L+
Sbjct: 235 SKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALLATASYDTRVYVWDPHNGDLL 291
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
Query: 176 IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
++ GL+N +I + ++ T + L+ + V L+F DG ++VS S L VW+L+
Sbjct: 142 LLATGLNNGRIKIWDVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTLRVWDLK 201
Query: 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA 295
D ++ +AH+ V F + +L + + LW DK ++R EGH
Sbjct: 202 DDGNMVKVLRAHQNWVYSCAFSPDCSMLCSVGASKAVFLWNMDKYT----MIRKLEGHHH 257
Query: 296 PPNYIQFYGNSSDNILSAAGDSTLRIF 322
F S D L A R++
Sbjct: 258 DVVACDF---SPDGALLATASYDTRVY 281
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH + + + V SG D +K+W ++ G R + R +
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCV-FRYRGHSQAVRCLRFSPDGKW 161
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA DD TV + D+ ++ + GH G + +F P+ L + S D TIR WD+
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF 221
Query: 577 QLIDCFQ 583
Q++ C +
Sbjct: 222 QVVSCIE 228
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 21/228 (9%)
Query: 102 DIVGTYKGHTSPVHLILPFGPH--LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGK 159
+ + + GHTSPV + P +++ + +++VWD++A + L MG
Sbjct: 54 NCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL---------MGH 104
Query: 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPM 219
+ N C L+ P + + G + I L +I + + V L F DG
Sbjct: 105 KANICS--LDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK-W 161
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
+ S ++ + +W+L ++ ++ H V F NE LL + S D T++ W +K
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFP-GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
+++ EG P + F N L + +LR++ + E
Sbjct: 221 F----QVVSCIEGEPGPVRSVLF--NPDGCCLYSGCQDSLRVYGWEPE 262
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESS 515
GH V V + +++++G +++VW + LR++ I H
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI--LRTLMGHKANICSLDFHPYGE 118
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+A D + + DI + + GH + FSPD +WL +A+ D T+++WD+ +
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 576 SQLIDCF 582
+++ F
Sbjct: 179 GKMMSEF 185
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Query: 472 QIVISGGNDQTVKVWHFKQ-------TG-KPPLRSIKLDNGISFFRTHQESSMLAVCLDD 523
+++ +GG+D V +W + TG P+ S++L+ +S
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG-------- 85
Query: 524 FTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
++ + D++ I+R L GH + DF P ++ + S D I++WDI
Sbjct: 86 -SIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+LA DD VN+ I+ I L+GH + + ++ S +IRVWD+ +
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 576 SQLI 579
++++
Sbjct: 95 AKIL 98
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 21/127 (16%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ---- 512
GH+ V V + + +G D+TV++W +Q N + F H+
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-----------GNSVRLFTGHRGPVL 472
Query: 513 ------ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDC 566
LA +D + + D+ + T+ ++L GH +T FSPDS + +ASMD
Sbjct: 473 SLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDN 532
Query: 567 TIRVWDI 573
++RVWDI
Sbjct: 533 SVRVWDI 539
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCT 535
SG +D+T ++W F +T + + L + + + H S+ LA D TV +
Sbjct: 401 SGSHDRTARLWSFDRTYPLRIYAGHLAD-VDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+R +GH G + FSP+ ++L +A D +++WD+ S L
Sbjct: 460 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 76/171 (44%), Gaps = 15/171 (8%)
Query: 107 YKGHTSPV--HLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSC 164
Y+GH PV I P+ + S + ++W + TY +I
Sbjct: 380 YQGHAYPVWDLDISPYSLYFASGSHDRTARLWSF--DRTY--------PLRIYAGHLAD- 428
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS 224
V+ ++ P + + G ++K + L + S+ F GPV +L+F +G + +G
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGE 488
Query: 225 NTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
+ L +W+L + ++ + H +T F + L+ ++S DN++++W
Sbjct: 489 DQ-RLKLWDLASGTLYKEL-RGHTDNITSLTFSPDSGLIASASMDNSVRVW 537
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
SGS+ +W+ DR +I H V F N L T S D T++LW
Sbjct: 399 FASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLW---- 453
Query: 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
+ G +R+ GH P + F N + SA D L++++ S T K L
Sbjct: 454 SAQQGNSVRLFTGHRGPVLSLAFSPNGK-YLASAGEDQRLKLWDLASGTLYKEL 506
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+SS L C +D ++ D+ + T GH + D D SP S + + S D T R+W
Sbjct: 353 DSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLW 411
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 17/108 (15%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN---GISFFRTHQESSMLAVCLDDFTVN 527
++++ +G ++ +K+W LRS KL + + R H +L +
Sbjct: 280 SKLLAAGFDNSCIKLW--------SLRSKKLKSEPHQVDVSRIHLACDILE------EED 325
Query: 528 IIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
D + T ++ L GH G + F DS L++ S D +IR WD+ S
Sbjct: 326 DEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS 373
>sp|Q6BU94|PRP46_DEBHA Pre-mRNA-splicing factor PRP46 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=PRP46 PE=3 SV=2
Length = 417
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQ 512
GH+ GVR + + + SG D+TVK W ++T I+ +G I H
Sbjct: 162 GHIMGVRSLAVSSRYPYLFSGSEDKTVKCWDLERTNSSSGCQIRNYHGHVGGIYAMALHP 221
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
E +L D + + D+ + T I LSGH +T +IT+SMD TIR+WD
Sbjct: 222 ELDLLFTGGRDSVIRVWDLRSRTEIMVLSGHRSDITSIASQIGDPQIITSSMDATIRLWD 281
Query: 573 I 573
I
Sbjct: 282 I 282
Score = 39.3 bits (90), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 7/125 (5%)
Query: 457 GHVGGVRGVVSDNL-NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS 515
H G VR D + N+ ++G +D T+K+W + + + G+
Sbjct: 119 AHQGWVRSCTVDPVTNKWFVTGSSDSTIKIWDLASSNLKATITGHI-MGVRSLAVSSRYP 177
Query: 516 MLAVCLDDFTVNIIDID-----TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRV 570
L +D TV D++ + IR GH+G + P+ L T D IRV
Sbjct: 178 YLFSGSEDKTVKCWDLERTNSSSGCQIRNYHGHVGGIYAMALHPELDLLFTGGRDSVIRV 237
Query: 571 WDIPS 575
WD+ S
Sbjct: 238 WDLRS 242
Score = 36.6 bits (83), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
++ +G + VW+L R E + HR +T +P ++TSS D T++LW
Sbjct: 225 LLFTGGRDSVIRVWDLRSR-TEIMVLSGHRSDITSIASQIGDPQIITSSMDATIRLWDIR 283
Query: 279 KADGNGRLLR----IREGHSAPPNYIQFYGNSSDNI 310
KA L IR P G++S N+
Sbjct: 284 KATTQLALTHHSKSIRSMAMHPQEMTMCSGDTSGNL 319
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 536 IIRKLSG-HMGQLTDADFSP-DSRWLITASMDCTIRVWDIPSSQL 578
++R ++G H G + P ++W +T S D TI++WD+ SS L
Sbjct: 112 LLRVMAGAHQGWVRSCTVDPVTNKWFVTGSSDSTIKIWDLASSNL 156
>sp|Q5ZME8|SMU1_CHICK WD40 repeat-containing protein SMU1 OS=Gallus gallus GN=SMU1 PE=2
SV=1
Length = 513
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Query: 408 KQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHV---GGVRG 464
K ++S C + G +++ G G ++ +N +G R + Q + V
Sbjct: 210 KFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLC 269
Query: 465 VVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL-DNGISFFRTHQESSMLAVCLDD 523
+ +++ +G D +KVW Q+G+ R + G++ ++SS + D
Sbjct: 270 MCFSRDTEMLATGAQDGKIKVWKI-QSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFD 328
Query: 524 FTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
T+ I + + +++ GH + +A F+ D ++I+AS D T++VW++ +++ + F+
Sbjct: 329 QTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNVKTTECSNTFK 388
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN 259
F+ V + F D M+ +G+ G + VW ++ Q + ++AH K VT F +
Sbjct: 260 FMMMDDAVLCMCFSRD-TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKD 318
Query: 260 EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319
++++S D T+++ +G+ L+ GHS+ N F + I+SA+ D T+
Sbjct: 319 SSQILSASFDQTIRI----HGLKSGKTLKEFRGHSSFVNEATFTQD-GHYIISASSDGTV 373
Query: 320 RIFNTK-SETSN--KNLGIASANRNNLKRKNRLEKMNEKFIL 358
+++N K +E SN K+LG + + L K E F++
Sbjct: 374 KVWNVKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVV 415
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 68/181 (37%), Gaps = 12/181 (6%)
Query: 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPM 219
+W +L P +D+ + K + T S V F DG
Sbjct: 170 KWQQHQGLLPPGMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQ-Y 228
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHR-------KVVTGAHFLYNEPLLVTSSPDNTL 272
+V+GS G + VWN ++ +K + V F + +L T + D +
Sbjct: 229 LVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKI 288
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKN 332
K+W K L R HS + F +SS ILSA+ D T+RI KS + K
Sbjct: 289 KVW---KIQSGQCLRRFERAHSKGVTCLSFSKDSS-QILSASFDQTIRIHGLKSGKTLKE 344
Query: 333 L 333
Sbjct: 345 F 345
>sp|P0CS48|PRP46_CRYNJ Pre-mRNA-splicing factor PRP46 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PRP46 PE=3 SV=1
Length = 473
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH+G VR V D NQ +G D+ +K+W +G+ L + I
Sbjct: 180 GHMGWVRAVAMDPGNQWFATGAGDRVIKIWDL-ASGELKLSLTGHISTIRGLAVSDRHPY 238
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
L C +D V D++T +IR GH + P L+T D ++RVWD+
Sbjct: 239 LFSCAEDKMVKCWDLETNKVIRHYHGHFSGVYSLSVHPTLDVLVTGGRDASVRVWDM 295
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH+ +RG+ + + + S D+ VK W +T K +G+ H +
Sbjct: 222 GHISTIRGLAVSDRHPYLFSCAEDKMVKCWDL-ETNKVIRHYHGHFSGVYSLSVHPTLDV 280
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
L D +V + D+ T I L+GH + D +I+ SMD T+R+WD+ +
Sbjct: 281 LVTGGRDASVRVWDMRTRANIFTLTGHTSTVGDVKTQDSDPQIISGSMDSTVRLWDLAAG 340
Query: 577 QLIDCF 582
+ ++
Sbjct: 341 KCMNTL 346
Score = 39.7 bits (91), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ R +SGHMG + P ++W T + D I++WD+ S +L
Sbjct: 174 LTRVISGHMGWVRAVAMDPGNQWFATGAGDRVIKIWDLASGEL 216
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 20/206 (9%)
Query: 122 PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL 181
P+L S E+ VK WD+ ET + + F S V L P +D++ G
Sbjct: 237 PYLFSCAEDKMVKCWDL---ETNKVIRHYHGHF--------SGVYSLSVHPTLDVLVTGG 285
Query: 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRT-DGPPMMVSGSNTGHLTVWNLEDRQVE 240
+ + + ++ T ++ F T T +T D P ++SGS + +W+L +
Sbjct: 286 RDASVRVWDMRTRANI--FTLTGHTSTVGDVKTQDSDPQIISGSMDSTVRLWDLAAGKCM 343
Query: 241 NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI 300
N + + V A SS N +K W + G + GH A N +
Sbjct: 344 NTLTHHKKSVRALAIHPTEYSFASASSGGNNIKKWKCPE----GIFVNNFVGHEAIINTL 399
Query: 301 QFYGNSSDNILSAAGDSTLRIFNTKS 326
NS + + S A + TL +++ K+
Sbjct: 400 SI--NSENVLFSGADNGTLTLWDYKT 423
>sp|Q7T2F6|WSB1_DANRE WD repeat and SOCS box-containing protein 1 OS=Danio rerio GN=wsb1
PE=2 SV=1
Length = 423
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 20/110 (18%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ----------ESSMLAVCLD 522
+++S D+T++VW K G N + R HQ +SS+L
Sbjct: 186 VLVSASRDKTLRVWDLKDDG----------NMVKVLRGHQNWVYCSAFSPDSSVLCSVGA 235
Query: 523 DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
V + D+D T+IRKL GH + +FSPD L TAS D + VWD
Sbjct: 236 GKAVFLWDMDKYTLIRKLEGHHNDVVCCEFSPDGALLATASYDTRVIVWD 285
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 26/214 (12%)
Query: 176 IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
++ GL+N +I + ++ T + L+ + V L+F DG ++VS S L VW+L+
Sbjct: 143 LLATGLNNGRIKIWDVYTGKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLK 202
Query: 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA 295
D ++ + H+ V + F + +L + + LW DK L+R EGH
Sbjct: 203 DDGNMVKVLRGHQNWVYCSAFSPDSSVLCSVGAGKAVFLWDMDKY----TLIRKLEGHHN 258
Query: 296 PPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEK 355
+F S D L A R+ T+ L +
Sbjct: 259 DVVCCEF---SPDGALLATASYDTRVIVWDPHTATVLLELGH------------------ 297
Query: 356 FILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSL 389
+ PP S G A ++ ++A H G++ S+
Sbjct: 298 -LFPPPSPIFAGGANDRWVRSVAFCHDGRHIASV 330
>sp|Q09715|TUP11_SCHPO Transcriptional repressor tup11 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup11 PE=1 SV=1
Length = 614
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531
+ ++SG D+T ++W +TG+ L+ ++++NG++ +AV D + + +
Sbjct: 415 RFIVSGSGDRTARLWDV-ETGQCILK-LEIENGVTAIAISPNDQFIAVGSLDQIIRVWSV 472
Query: 532 DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ T++ +L GH + FSPDS L++ S+D TI+VW++ +++ +
Sbjct: 473 -SGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSV 519
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 11/128 (8%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH V + + I++SG D+T+KVW + T L +IK + T +
Sbjct: 482 GHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFV 541
Query: 517 LAVCLD-----------DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMD 565
L+V + D ++ D+ T GH + FSPD R + S D
Sbjct: 542 LSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGD 601
Query: 566 CTIRVWDI 573
R+W I
Sbjct: 602 LRARIWSI 609
Score = 40.8 bits (94), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
L +D + + D+ T + SGH + DFS + R++++ S D T R+WD+ +
Sbjct: 375 LVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETG 434
Query: 577 QLI 579
Q I
Sbjct: 435 QCI 437
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 173 VVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVW 232
++ V K LH D S +++T ++F DG +V+G+ + +W
Sbjct: 335 AANVFDVQTGKKLFTLHEESPDPSRDLYVRT------IAFSPDGK-YLVTGTEDRQIKLW 387
Query: 233 NLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
+L ++V + H + + F +N +V+ S D T +LW
Sbjct: 388 DLSTQKVR-YVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLW 429
>sp|Q5BE22|PRP46_EMENI Pre-mRNA-splicing factor prp46 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=prp46
PE=3 SV=1
Length = 452
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 431 YSSGHVDR----FNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
++SG DR +N+ +GA R + GH+ VRG+ + + S G D+ VK W
Sbjct: 158 FASGAGDRTIKIWNLATGALRLTL-----TGHISTVRGLAVSPRHPYLFSCGEDKMVKCW 212
Query: 487 HFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ 546
+T K +G+ H +L D + D+ T + I LSGH G
Sbjct: 213 DL-ETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVLSGHTGT 271
Query: 547 LTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
+ D +IT S+D T+R+WD+ + + +
Sbjct: 272 VADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVL 307
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQES-- 514
GH+G VR + + N+ SG D+T+K+W+ TG LR + L IS R S
Sbjct: 141 GHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLA-TGA--LR-LTLTGHISTVRGLAVSPR 196
Query: 515 -SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
L C +D V D++T +IR GH+ + P L+T D RVWD+
Sbjct: 197 HPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDM 256
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 26/43 (60%)
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
++R +SGH+G + P++ W + + D TI++W++ + L
Sbjct: 135 LMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGAL 177
>sp|Q9D7H2|WDR5B_MOUSE WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1
Length = 328
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 124 LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN 183
L+S ++ +KVWD+++ + L +D V + +P ++I G +
Sbjct: 96 LVSASDDKTLKVWDMRSGKCLKTLKGHSDF-----------VFCCDFNPPSNLIVSGSFD 144
Query: 184 KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI 243
+ + + + T + L P++A++F +G ++VSGS G +W+ Q +
Sbjct: 145 ESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGS-LIVSGSYDGLCRIWDAASGQCLRTL 203
Query: 244 KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPN--YIQ 301
V+ F N ++T++ DNTLKLW + + GR L+ GH +
Sbjct: 204 ADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSR----GRCLKTYTGHKNEKYCLFAS 259
Query: 302 FYGNSSDNILSAAGDSTLRIFNTKSE 327
F ++S + D+ + I+N +++
Sbjct: 260 FSVTGRKWVVSGSEDNMVYIWNLQTK 285
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 432 SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491
+S D I GA+ G+ GH + V + + ++S +D+T+KVW + +
Sbjct: 55 ASSAADALIIIWGAYDGNC-KKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMR-S 112
Query: 492 GKPPLRSIKLDNGISFFRTHQESSMLAVCLD-DFTVNIIDIDTCTIIRKLSGHMGQLTDA 550
GK L+++K + F S L V D +V I ++ T ++ LS H ++
Sbjct: 113 GKC-LKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAV 171
Query: 551 DFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+F+ + +++ S D R+WD S Q +
Sbjct: 172 NFNCNGSLIVSGSYDGLCRIWDAASGQCL 200
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVW-HFKQTGKPPLRSIKLDNGISFFRTHQESS 515
GH + V + + S D + +W + K L L+ IS +SS
Sbjct: 37 GHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLE--ISDVAWSSDSS 94
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
L DD T+ + D+ + ++ L GH + DF+P S +++ S D ++++W++ +
Sbjct: 95 RLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKT 154
Query: 576 SQLI 579
+ +
Sbjct: 155 GKCL 158
Score = 40.4 bits (93), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
+ +++SG D++VK+W K TGK + IS + S++ D I D
Sbjct: 135 SNLIVSGSFDESVKIWEVK-TGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWD 193
Query: 531 IDTCTIIRKLSGHMGQ-LTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
+ +R L+ ++ FSP+ ++++TA++D T+++WD + + +
Sbjct: 194 AASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY 246
Score = 36.2 bits (82), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 92/219 (42%), Gaps = 41/219 (18%)
Query: 99 RGIDIVGTYKGHTSPVHLILPFGPH---LISVDEESNVKVWDIKAEETYLELSFDND--- 152
R + T KGH+ V F P ++S + +VK+W++K + LS +D
Sbjct: 111 RSGKCLKTLKGHSDFV-FCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPIS 169
Query: 153 --------------TFKIMGKRWNS----CVNVL--EPSPVVDIIGVGLSNKKIILHNI- 191
++ + + W++ C+ L E +P V + + K I+ +
Sbjct: 170 AVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLD 229
Query: 192 ----LTDESLMEFIQTWGP------VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN 241
L D S ++T+ SF G +VSGS + +WNL+ +++
Sbjct: 230 NTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQ 289
Query: 242 QIKKAHRKVVTGAHFLYNEPLLVTSSPDN--TLKLWIFD 278
++ + H VV A + ++ +++ +N T+K+W D
Sbjct: 290 RL-QGHTDVVISAACHPTKNIIASAALENDKTIKVWSSD 327
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 11/131 (8%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWH-----FKQTGKPPLRSIKLDNGISFFRTH 511
GH V + + + +G D+ +KVW+ + QT L S +L GI+ F
Sbjct: 211 GHTKSVSVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQT----LASHQL--GINDFSWS 264
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
S +A DD TV I D+ + +R + GH + F+P S + +A D T+RVW
Sbjct: 265 SNSQFIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVW 324
Query: 572 DIPSSQLIDCF 582
D + + C
Sbjct: 325 DFKTGLCVKCI 335
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 8/165 (4%)
Query: 416 TCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVI 475
+ + ++CG ++ G + + +N + + H G+ + +Q +
Sbjct: 217 SVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTLA-----SHQLGINDFSWSSNSQFIA 271
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRT-HQESSMLAVCLDDFTVNIIDIDTC 534
S +D TVK+ F LR+++ F + + +SS++A D TV + D T
Sbjct: 272 SASDDTTVKI--FDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWDFKTG 329
Query: 535 TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
++ + H +T ++ D + T+S D IRVWD S +
Sbjct: 330 LCVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCL 374
Score = 40.4 bits (93), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL-DNGISFFRTHQESS 515
GH V + + ++ S G D+TV+VW FK TG ++ I + I+ + + +
Sbjct: 295 GHTNYVFCCSFNPQSSLIASAGFDETVRVWDFK-TGLC-VKCIPAHSDPITSISYNHDGN 352
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKL-SGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+A D + + D + + ++ L +T FSP+ ++L++A +D ++++WD
Sbjct: 353 TMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWD 410
>sp|Q4WT34|PRP46_ASPFU Pre-mRNA-splicing factor prp46 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=prp46
PE=3 SV=1
Length = 453
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 10/153 (6%)
Query: 431 YSSGHVDR----FNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
++SG DR +N+ +GA R + GH+ VRG+ + + S G D+ VK W
Sbjct: 159 FASGAGDRTIKIWNLATGALRLTL-----TGHISTVRGLAVSPRHPYLFSCGEDKMVKCW 213
Query: 487 HFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ 546
+T K +G+ H +L D + D+ T + I LSGH G
Sbjct: 214 DL-ETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVLSGHKGT 272
Query: 547 LTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ D +IT S+D T+R+WD+ + + +
Sbjct: 273 VADLKCQEADPQIITGSLDATVRLWDLAAGKTM 305
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR---THQE 513
GH+G VR + + N+ SG D+T+K+W+ TG LR + L IS R
Sbjct: 142 GHLGWVRSLAVEPNNEWFASGAGDRTIKIWNL-ATGA--LR-LTLTGHISTVRGLAVSPR 197
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
L C +D V D++T +IR GH+ + P L+T D RVWD+
Sbjct: 198 HPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDM 257
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 26/43 (60%)
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
++R +SGH+G + P++ W + + D TI++W++ + L
Sbjct: 136 LMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGAL 178
>sp|Q99M63|SMU1_RAT WD40 repeat-containing protein SMU1 OS=Rattus norvegicus GN=Smu1
PE=2 SV=1
Length = 513
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Query: 408 KQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHV---GGVRG 464
K ++S C + G +++ G G ++ +N +G R + Q + V
Sbjct: 210 KFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLC 269
Query: 465 VVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL-DNGISFFRTHQESSMLAVCLDD 523
+ +++ +G D +KVW Q+G+ R + G++ ++SS + D
Sbjct: 270 MCFSRDTEMLATGAQDGKIKVWKI-QSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFD 328
Query: 524 FTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
T+ I + + +++ GH + +A F+ D ++I+AS D T+++W++ +++ + F+
Sbjct: 329 QTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFK 388
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN 259
F+ V + F D M+ +G+ G + VW ++ Q + ++AH K VT F +
Sbjct: 260 FMMMDDAVLCMCFSRD-TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKD 318
Query: 260 EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319
++++S D T+++ +G+ L+ GHS+ N F + I+SA+ D T+
Sbjct: 319 SSQILSASFDQTIRI----HGLKSGKTLKEFRGHSSFVNEATFTQD-GHYIISASSDGTV 373
Query: 320 RIFNTK-SETSN--KNLGIASANRNNLKRKNRLEKMNEKFIL 358
+I+N K +E SN K+LG + + L K E F++
Sbjct: 374 KIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVV 415
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 68/181 (37%), Gaps = 12/181 (6%)
Query: 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPM 219
+W +L P +D+ + K + T S V F DG
Sbjct: 170 KWQQHQGLLPPGMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQ-Y 228
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHR-------KVVTGAHFLYNEPLLVTSSPDNTL 272
+V+GS G + VWN ++ +K + V F + +L T + D +
Sbjct: 229 LVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKI 288
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKN 332
K+W K L R HS + F +SS ILSA+ D T+RI KS + K
Sbjct: 289 KVW---KIQSGQCLRRFERAHSKGVTCLSFSKDSS-QILSASFDQTIRIHGLKSGKTLKE 344
Query: 333 L 333
Sbjct: 345 F 345
>sp|Q6C709|PRP46_YARLI Pre-mRNA-splicing factor PRP46 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=PRP46 PE=3 SV=2
Length = 441
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH G VR V + NQ +G D+T+K+W TGK L G+
Sbjct: 130 GHQGWVRSVCVEPENQWFATGSADKTIKIWDLA-TGKLRLTLTGHIMGVRALGVSPRHPY 188
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ +D V D++T ++R GH+ + D P L++A D RVWDI
Sbjct: 189 MFSGGEDKMVKCWDLETNKVVRHYHGHLSAVYSLDIHPTLDVLVSAGRDAVARVWDI 245
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH+ GVR + + + SGG D+ VK W +T K + + H +
Sbjct: 172 GHIMGVRALGVSPRHPYMFSGGEDKMVKCWDL-ETNKVVRHYHGHLSAVYSLDIHPTLDV 230
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
L D + DI T + LSGH + F +ITAS D T+R+W++ +
Sbjct: 231 LVSAGRDAVARVWDIRTRDPVVVLSGHKSTINRVKFQASEPQVITASADETVRLWNLQAG 290
Query: 577 QLIDCF 582
+ +
Sbjct: 291 KTMTTL 296
Score = 40.0 bits (92), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
I R ++GH G + P+++W T S D TI++WD+ + +L
Sbjct: 124 IYRVITGHQGWVRSVCVEPENQWFATGSADKTIKIWDLATGKL 166
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 19/184 (10%)
Query: 96 AWRRGIDIVGTYKGHTSPVH--LILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDT 153
AW +I GH V + P + + +K+WD+ + L L T
Sbjct: 117 AWHAPWEIYRVITGHQGWVRSVCVEPENQWFATGSADKTIKIWDLATGKLRLTL-----T 171
Query: 154 FKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFR 213
IMG V L SP + G +K + ++ T++ + + V +L
Sbjct: 172 GHIMG------VRALGVSPRHPYMFSGGEDKMVKCWDLETNKVVRHYHGHLSAVYSLDIH 225
Query: 214 TDGPPM--MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271
P + +VS VW++ R + H+ + F +EP ++T+S D T
Sbjct: 226 ---PTLDVLVSAGRDAVARVWDIRTRD-PVVVLSGHKSTINRVKFQASEPQVITASADET 281
Query: 272 LKLW 275
++LW
Sbjct: 282 VRLW 285
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 227,243,036
Number of Sequences: 539616
Number of extensions: 9810862
Number of successful extensions: 37138
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 520
Number of HSP's that attempted gapping in prelim test: 26916
Number of HSP's gapped (non-prelim): 8362
length of query: 583
length of database: 191,569,459
effective HSP length: 123
effective length of query: 460
effective length of database: 125,196,691
effective search space: 57590477860
effective search space used: 57590477860
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)