Your job contains 1 sequence.
>psy14906
MVESTPSSSSTSSNSSKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGC
NHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPF
GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG
LSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE
NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI
QFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPP
VSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYI
THCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGND
QTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKL
SGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14906
(583 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0038146 - symbol:CG9799 species:7227 "Drosophila m... 1064 1.3e-107 1
RGD|1586463 - symbol:Wdr36 "WD repeat domain 36" species:... 1037 9.5e-105 1
UNIPROTKB|F1PNT8 - symbol:WDR36 "Uncharacterized protein"... 1028 8.6e-104 1
UNIPROTKB|F1RLI4 - symbol:WDR36 "Uncharacterized protein"... 1027 1.1e-103 1
UNIPROTKB|Q8NI36 - symbol:WDR36 "WD repeat-containing pro... 1025 1.8e-103 1
ZFIN|ZDB-GENE-030131-464 - symbol:wdr36 "WD repeat domain... 1024 2.3e-103 1
UNIPROTKB|G3X6I6 - symbol:WDR36 "Uncharacterized protein"... 1023 2.9e-103 1
UNIPROTKB|F1NKR5 - symbol:WDR36 "Uncharacterized protein"... 994 3.2e-102 2
TAIR|locus:2135393 - symbol:AT4G04940 "AT4G04940" species... 741 2.2e-73 1
POMBASE|SPCC1672.07 - symbol:SPCC1672.07 "U3 snoRNP-assoc... 699 6.3e-69 1
SGD|S000004401 - symbol:UTP21 "Subunit of U3-containing 9... 524 5.1e-61 2
CGD|CAL0005566 - symbol:UTP21 species:5476 "Candida albic... 533 1.6e-50 1
UNIPROTKB|Q5ALL2 - symbol:UTP21 "Putative uncharacterized... 533 1.6e-50 1
WB|WBGene00012887 - symbol:Y45F10D.7 species:6239 "Caenor... 430 1.1e-46 2
DICTYBASE|DDB_G0277019 - symbol:wdr36 "U3 snoRNP protein"... 427 5.6e-39 1
ASPGD|ASPL0000018270 - symbol:AN8293 species:162425 "Emer... 291 2.7e-29 2
UNIPROTKB|G4N4W8 - symbol:MGG_16744 "Uncharacterized prot... 212 2.7e-26 3
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 172 2.2e-16 2
UNIPROTKB|F1NC11 - symbol:WDR3 "Uncharacterized protein" ... 138 6.2e-14 2
MGI|MGI:2443143 - symbol:Wdr3 "WD repeat domain 3" specie... 137 1.0e-13 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 192 1.5e-13 2
RGD|1307480 - symbol:Wdr3 "WD repeat domain 3" species:10... 137 1.7e-13 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 135 2.3e-13 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 138 2.4e-13 2
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 140 3.6e-13 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 138 4.7e-13 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 138 4.7e-13 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 138 4.7e-13 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 138 4.7e-13 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 138 4.7e-13 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 138 4.7e-13 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 138 4.7e-13 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 138 4.7e-13 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 138 4.7e-13 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 138 5.4e-13 2
SGD|S000004119 - symbol:DIP2 "Nucleolar protein" species:... 131 8.0e-13 3
UNIPROTKB|Q9UNX4 - symbol:WDR3 "WD repeat-containing prot... 133 2.0e-12 2
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 127 6.9e-12 3
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 127 6.9e-12 3
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 140 8.6e-12 2
UNIPROTKB|E1BM03 - symbol:WDR3 "Uncharacterized protein" ... 130 1.1e-11 2
UNIPROTKB|F1SAY9 - symbol:WDR3 "Uncharacterized protein" ... 125 3.7e-11 2
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 119 7.0e-11 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 132 8.7e-11 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 148 1.2e-10 2
DICTYBASE|DDB_G0282623 - symbol:wdr3 "U3 snoRNP protein" ... 159 1.6e-10 2
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 136 2.0e-10 2
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 119 2.3e-10 2
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 117 4.7e-10 2
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 131 4.9e-10 2
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 124 5.0e-10 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 141 6.1e-10 2
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 116 7.9e-10 2
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 116 8.7e-10 2
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 116 1.0e-09 2
WB|WBGene00017435 - symbol:F13H8.2 species:6239 "Caenorha... 117 1.0e-09 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 128 1.1e-09 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 135 1.1e-09 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 117 1.3e-09 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 129 1.8e-09 2
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 131 2.3e-09 2
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 148 2.4e-09 2
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 128 2.6e-09 2
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 116 2.7e-09 2
CGD|CAL0005039 - symbol:orf19.3467 species:5476 "Candida ... 114 2.9e-09 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 141 2.9e-09 2
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 109 3.4e-09 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 174 3.9e-09 2
UNIPROTKB|G4MXN3 - symbol:MGG_01259 "Pre-mRNA splicing fa... 110 4.8e-09 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 130 5.2e-09 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 134 5.7e-09 2
CGD|CAL0005179 - symbol:orf19.5410 species:5476 "Candida ... 145 6.1e-09 3
FB|FBgn0036733 - symbol:U4-U6-60K "U4-U6 small nuclear ri... 145 6.8e-09 2
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 116 8.9e-09 2
TAIR|locus:2089855 - symbol:AT3G21540 "AT3G21540" species... 139 9.8e-09 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 116 1.1e-08 2
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 122 1.2e-08 2
CGD|CAL0004039 - symbol:orf19.3301 species:5476 "Candida ... 143 1.2e-08 2
TAIR|locus:2050064 - symbol:AT2G21390 species:3702 "Arabi... 167 1.5e-08 1
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 138 1.5e-08 2
ZFIN|ZDB-GENE-040426-2787 - symbol:plrg1 "pleiotropic reg... 162 1.5e-08 1
FB|FBgn0038666 - symbol:Smu1 "SMU1 ortholog" species:7227... 161 1.7e-08 2
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 116 1.7e-08 2
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 124 1.9e-08 2
UNIPROTKB|G4MTR1 - symbol:MGG_04746 "DOM34-interacting pr... 138 2.0e-08 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 116 2.3e-08 2
DICTYBASE|DDB_G0267982 - symbol:copA "coatomer protein co... 165 2.4e-08 1
FB|FBgn0034876 - symbol:wmd "wing morphogenesis defect" s... 106 2.6e-08 2
ASPGD|ASPL0000054401 - symbol:AN0305 species:162425 "Emer... 131 2.7e-08 2
RGD|620575 - symbol:Apaf1 "apoptotic peptidase activating... 117 2.8e-08 2
ASPGD|ASPL0000005389 - symbol:sconB species:162425 "Emeri... 135 2.8e-08 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 137 2.9e-08 2
WB|WBGene00004265 - symbol:qui-1 species:6239 "Caenorhabd... 134 3.1e-08 2
MGI|MGI:1306796 - symbol:Apaf1 "apoptotic peptidase activ... 110 3.8e-08 2
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 113 3.8e-08 2
TAIR|locus:2016214 - symbol:AT1G79990 species:3702 "Arabi... 112 3.8e-08 2
POMBASE|SPBPJ4664.04 - symbol:SPBPJ4664.04 "coatomer alph... 163 3.9e-08 1
TAIR|locus:2036823 - symbol:AT1G62020 species:3702 "Arabi... 163 4.0e-08 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 150 4.1e-08 2
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 113 4.7e-08 3
WARNING: Descriptions of 459 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0038146 [details] [associations]
symbol:CG9799 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007319 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0032040 EMBL:AY052114
ProteinModelPortal:Q960D6 SMR:Q960D6 STRING:Q960D6 PaxDb:Q960D6
PRIDE:Q960D6 FlyBase:FBgn0038146 InParanoid:Q960D6
OrthoDB:EOG4KD521 ArrayExpress:Q960D6 Bgee:Q960D6 Uniprot:Q960D6
Length = 922
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 205/426 (48%), Positives = 296/426 (69%)
Query: 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
+S + +EPSP +D++ VG + IIL N+ DE LM F Q WG VT LSFRTDGPP++V
Sbjct: 203 DSRITCIEPSPALDVVAVGHGDGTIILLNLKFDEVLMSFQQDWGQVTNLSFRTDGPPILV 262
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
S + G++ WNLE+R++ Q++ AH + VT A L +EP++ T+SPDN++++++FD D
Sbjct: 263 SACSNGYMAFWNLEERKLAGQLQ-AHEESVTTAICLPSEPVVFTTSPDNSMRMFVFDMPD 321
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAXXX 341
G R LRIREGH+ PP I+++G+S +ILS+ DST+R+F+T SE+ NK++G A+
Sbjct: 322 GGARQLRIREGHTKPPFCIRYHGSSGVSILSSGEDSTMRVFSTISESLNKSMGRATYNPK 381
Query: 342 XXXXXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401
E ++KF +PP+ +F+ AREK+W+NIAAIH G + + WSF K++M +
Sbjct: 382 ATKKKNRFE--HDKFGMPPILEFTSDTAREKEWDNIAAIHAGVIQATTWSFGKNRMGEHR 439
Query: 402 LVPERCKQAK----QSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPG 457
LVP++ + + Q++ TC+ +THCGNFV+IGYSSG ++RFNIQSG HR +YG P
Sbjct: 440 LVPKQFQNSNRTNFQNETTCIVLTHCGNFVIIGYSSGDIERFNIQSGLHRATYG---SPA 496
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSML 517
H VRG+ SDNLNQ VISG ++ +K W FK PL +++L +GI+ R H+ESSML
Sbjct: 497 HKMAVRGLASDNLNQTVISGCSEGLLKFWSFKGKVDKPLATLRLADGIALIRLHRESSML 556
Query: 518 AVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577
A+ L+ F + ++D+ T I+RK GH +L D FSPDSRWLITA+MD TI+VWDIPSS
Sbjct: 557 AIGLETFKIFVVDMHTRVIVRKFVGHTAKLNDLTFSPDSRWLITAAMDSTIKVWDIPSSY 616
Query: 578 LIDCFQ 583
++D F+
Sbjct: 617 MVDHFR 622
Score = 424 (154.3 bits), Expect = 9.0e-39, P = 9.0e-39
Identities = 91/269 (33%), Positives = 150/269 (55%)
Query: 18 IFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDIT 77
IF R+RALGYVSN +P V R+++RR++TL +TC+G++F VY NHF+LL VS H D+IT
Sbjct: 25 IFRRNRALGYVSNQVPAVTRYVQRRRDTLLITCIGRSFQVYTANHFRLLHVSGLHPDEIT 84
Query: 78 CLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWD 137
L++D H YT++N IYAWR G I Y+GH VHL+LPFG LI++D ++ +KVW+
Sbjct: 85 ALATDRLHTYTASNKCIYAWRAGKHIRHVYRGHQKDVHLLLPFGSSLIAIDRQNVLKVWN 144
Query: 138 IKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL 197
I E+ YLE+ F ++ F+I V P ++ I +G ++ + NI + +
Sbjct: 145 ISTEDVYLEVPFRSEEFQITA--------VTHPPTYINKIVLGSQQGQLKILNIKKNSVV 196
Query: 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL 257
+T + + ++ G G + + NL+ +V ++ +V +
Sbjct: 197 CTLSHHDSRITCIE-PSPALDVVAVGHGDGTIILLNLKFDEVLMSFQQDWGQVTNLSFRT 255
Query: 258 YNEPLLVTSSPDNTLKLWIFDKADGNGRL 286
P+LV++ + + W ++ G+L
Sbjct: 256 DGPPILVSACSNGYMAFWNLEERKLAGQL 284
>RGD|1586463 [details] [associations]
symbol:Wdr36 "WD repeat domain 36" species:10116 "Rattus
norvegicus" [GO:0001895 "retina homeostasis" evidence=ISO]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0030516 "regulation
of axon extension" evidence=ISO] [GO:0032040 "small-subunit
processome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:1586463
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364
GO:GO:0032040 GeneTree:ENSGT00390000004976 IPI:IPI00766595
PRIDE:F1MA04 Ensembl:ENSRNOT00000031530 Uniprot:F1MA04
Length = 882
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 213/544 (39%), Positives = 326/544 (59%)
Query: 46 LFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYT-SANNIIYAWRRGID-- 102
L G F + N +++ H+ +I L H+ + ++++ W +
Sbjct: 82 LVFAAYGNVFSAFARNK-EIVHTFKGHKAEIHLLQPFGDHVISVDTDSVLIIWHIYSEEE 140
Query: 103 -IVGTYKGHTSPVHLILPFGPHLISV---DEESNVKVWDIKAEETYLELSFDNDTFKIMG 158
+ T+ + IL +L V E+ ++++W+IK+ + L + TF G
Sbjct: 141 YLQLTFDKSVFKISTILHPSTYLNKVLLGSEQGSLQLWNIKSNK----LLY---TFP--G 191
Query: 159 KRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPP 218
W V L+ +P VD++ +GL + ++++HNI DE+LM+F Q WGP+T++SFRTDG P
Sbjct: 192 --WKVGVTALQQAPAVDVVAIGLVSGQVVIHNIKFDETLMKFHQDWGPITSISFRTDGHP 249
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
+M +GS GH+ +W+LED+++ NQ++ AH ++G FL+ EPLLVT+ DN L++WIFD
Sbjct: 250 IMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAISGLTFLHREPLLVTNGADNALRIWIFD 309
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
G GRLLR+R GHSA I++YG + ILSA+ D TL+ F+T E NK+LG
Sbjct: 310 GPTGEGRLLRLRMGHSASLTKIRYYGQNGQQILSASQDGTLQSFSTVHEKFNKSLGHGLV 369
Query: 339 XXXXXXXXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMD 398
M+ + LPP++QF+ AR+ DW+ + A H GK S W++ +S +
Sbjct: 370 NKKIVKRKGLQNTMSVR--LPPITQFAAEEARQSDWDGVIACHQGKLSCSTWNYQRSTIG 427
Query: 399 DMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGH 458
FL P+ K A + T V IT CGNF +IG SSG VD +N+QSG HRGS+G ++ H
Sbjct: 428 AYFLKPKNVK-ANSATATAVDITSCGNFAIIGLSSGAVDVYNMQSGIHRGSFG--DEKAH 484
Query: 459 VGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLA 518
G VRGV D LNQ+ I+ G+++ +K W+FK K + S+ LD+ + H++S +L
Sbjct: 485 AGSVRGVAVDGLNQLAITAGSERLLKFWNFKS--KVLVHSLSLDSPPNVMLLHRDSGILG 542
Query: 519 VCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ LDDF++ ++DI+T I+R+ SGH GQ+ D FSPD RWLI+A+MDC++R WD+PS L
Sbjct: 543 LALDDFSITVLDIETRKIVREFSGHQGQINDMTFSPDGRWLISAAMDCSVRTWDLPSGCL 602
Query: 579 IDCF 582
IDCF
Sbjct: 603 IDCF 606
Score = 351 (128.6 bits), Expect = 4.8e-29, P = 4.8e-29
Identities = 93/309 (30%), Positives = 157/309 (50%)
Query: 18 IFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDIT 77
+F RALG SN +P V R+ ++ TCVGK+FH Y L++VS DI
Sbjct: 15 LFAGFRALGLFSNDIPHVVRYNALKRRFYVTTCVGKSFHTYDVQKLSLVAVSNSVPQDIC 74
Query: 78 CLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWD 137
C+++D ++ + N+ A+ R +IV T+KGH + +HL+ PFG H+ISVD +S + +W
Sbjct: 75 CMAADGRLVFAAYGNVFSAFARNKEIVHTFKGHKAEIHLLQPFGDHVISVDTDSVLIIWH 134
Query: 138 IKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL 197
I +EE YL+L+FD FKI +L PS ++ + +G + L NI +++ L
Sbjct: 135 IYSEEEYLQLTFDKSVFKIS--------TILHPSTYLNKVLLGSEQGSLQLWNIKSNKLL 186
Query: 198 MEFIQTWGP-VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRK--VVTGA 254
F W VTAL + ++ G +G + + N++ + + K H+ +T
Sbjct: 187 YTF-PGWKVGVTALQ-QAPAVDVVAIGLVSGQVVIHNIK---FDETLMKFHQDWGPITSI 241
Query: 255 HFLYN-EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSA 313
F + P++ SP + LW D D + ++R HS + + F + +++
Sbjct: 242 SFRTDGHPIMAAGSPCGHIGLW--DLEDKK-LINQMRNAHSTAISGLTFL-HREPLLVTN 297
Query: 314 AGDSTLRIF 322
D+ LRI+
Sbjct: 298 GADNALRIW 306
>UNIPROTKB|F1PNT8 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364 GO:GO:0032040
GeneTree:ENSGT00390000004976 KO:K14554 OMA:DGIIACH CTD:134430
EMBL:AAEX03001970 RefSeq:XP_545992.2 ProteinModelPortal:F1PNT8
Ensembl:ENSCAFT00000011832 GeneID:488875 KEGG:cfa:488875
Uniprot:F1PNT8
Length = 891
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 220/562 (39%), Positives = 330/562 (58%)
Query: 28 VSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIY 87
VSN LP + +F G F + N +++ H+ +I L H+
Sbjct: 59 VSNSLPQDICCMAADGRLVFAA-YGNVFSAFARNK-EVVHTYKGHKAEIRLLQPFGDHVI 116
Query: 88 T-SANNIIYAWRRGID---IVGTYKGHTSPVHLILPFGPHLISV---DEESNVKVWDIKA 140
+ ++++ W + + T+ + IL +L + E+ +++W+IK+
Sbjct: 117 SVDTDSVLIIWHIYSEEEYLQLTFDKSVFKISAILHPSTYLNKILLGSEQGTLQLWNIKS 176
Query: 141 EETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEF 200
+ L + TF+ G W V L+ +P VD++ VGL++ ++I+HNI DE+LM+F
Sbjct: 177 NK----LLY---TFQ--G--WKFGVTALQQAPAVDVVAVGLTSGQVIIHNIKFDETLMKF 225
Query: 201 IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNE 260
Q WGP+T++SFRTDG P+M +GS GH+ +W+LED+++ NQ++ AH + G FL+ E
Sbjct: 226 RQDWGPITSISFRTDGHPIMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGLTFLHRE 285
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLR 320
PLLVT+ DN L++WIFD G GRLLR R GHSAP I++YG + ILSA+ D TL+
Sbjct: 286 PLLVTNGADNALRIWIFDGPTGEGRLLRFRMGHSAPLTKIRYYGQNGQQILSASQDGTLQ 345
Query: 321 IFNTKSETSNKNLGIASAXXXXXXXXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAI 380
F+T E NK+LG M+ + LPP+++F+ ARE DW++I A
Sbjct: 346 SFSTIHEKFNKSLGHGLINKKKVKRKGLQNAMSVR--LPPITKFAAEEARESDWDSIIAC 403
Query: 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFN 440
H GK S W++ +S + FL P+ K+ T V IT CGNF +IG SSG VD +N
Sbjct: 404 HQGKLSCSTWNYQRSTIGAYFLKPKELKK-DDITATAVDITSCGNFAVIGLSSGTVDVYN 462
Query: 441 IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK 500
+QSG HRGS+G D H G VRGV D LNQ++I+ G++ +K W+FK K + S+
Sbjct: 463 MQSGIHRGSFGEDQ--AHKGSVRGVAVDGLNQLIITAGSEGLLKFWNFKN--KILIHSMS 518
Query: 501 LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLI 560
L + + H++S +L + LDDF++ ++DI+T I+R+ SGH GQ+ D FSPD RWLI
Sbjct: 519 LSSSPNMMLLHRDSGILGLALDDFSICVLDIETRKIVREFSGHQGQINDLAFSPDGRWLI 578
Query: 561 TASMDCTIRVWDIPSSQLIDCF 582
+ASMDC++R WD+PS LID F
Sbjct: 579 SASMDCSVRTWDLPSGCLIDSF 600
Score = 320 (117.7 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 87/306 (28%), Positives = 149/306 (48%)
Query: 18 IFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDIT 77
+F RALG S + V RF + TC K+FH Y L++VS DI
Sbjct: 9 LFAGFRALGLFSTDVAHVLRFSALKPRFFVTTCGAKSFHTYDVQKLSLVAVSNSLPQDIC 68
Query: 78 CLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWD 137
C+++D ++ + N+ A+ R ++V TYKGH + + L+ PFG H+ISVD +S + +W
Sbjct: 69 CMAADGRLVFAAYGNVFSAFARNKEVVHTYKGHKAEIRLLQPFGDHVISVDTDSVLIIWH 128
Query: 138 IKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL 197
I +EE YL+L+FD FKI +L PS ++ I +G + L NI +++ L
Sbjct: 129 IYSEEEYLQLTFDKSVFKISA--------ILHPSTYLNKILLGSEQGTLQLWNIKSNKLL 180
Query: 198 MEFIQTWG-PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF 256
F Q W VTAL + ++ G +G + + N++ + + ++ + + +
Sbjct: 181 YTF-QGWKFGVTALQ-QAPAVDVVAVGLTSGQVIIHNIKFDETLMKFRQDWGPITSISFR 238
Query: 257 LYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD 316
P++ SP + LW D D + ++R HS + F + +++ D
Sbjct: 239 TDGHPIMAAGSPCGHIGLW--DLEDKK-LINQMRNAHSTAIAGLTFL-HREPLLVTNGAD 294
Query: 317 STLRIF 322
+ LRI+
Sbjct: 295 NALRIW 300
>UNIPROTKB|F1RLI4 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007319 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 GO:GO:0032040
GeneTree:ENSGT00390000004976 OMA:DGIIACH EMBL:CU972447
Ensembl:ENSSSCT00000015514 Uniprot:F1RLI4
Length = 952
Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
Identities = 203/455 (44%), Positives = 292/455 (64%)
Query: 129 EESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIIL 188
E+ ++++W++K+ + L + TF G W + V L+ +P VD++ VGL + ++I+
Sbjct: 225 EQGSLQLWNVKSNK----LLY---TFA--G--WKTGVTALQQAPAVDVVAVGLMSGQVII 273
Query: 189 HNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHR 248
HNI DE+LM+F Q WGP+T++SFRTDG P+M +GS GH+ +W+LED+++ NQ++ AH
Sbjct: 274 HNIKFDETLMKFRQDWGPITSISFRTDGHPVMAAGSPCGHIGLWDLEDKKLINQMRNAHS 333
Query: 249 KVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSD 308
+ G FL+ EPLLVT+ DN L++WIFD G GRLLR R GHSAP I++YG +
Sbjct: 334 TAIAGLTFLHREPLLVTNGADNALRIWIFDGPTGEGRLLRFRMGHSAPLTKIRYYGQNGQ 393
Query: 309 NILSAAGDSTLRIFNTKSETSNKNLGIASAXXXXXXXXXXXEKMNEKFILPPVSQFSFGL 368
ILSA+ D TL+ F+T E NK+LG M + LPP+++F+
Sbjct: 394 QILSASQDGTLQSFSTIHEKFNKSLGHGLINKKRVKRKGLQNAMTVR--LPPITEFAAEE 451
Query: 369 AREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVL 428
ARE DW+ I A H GK S W++ +S + FL P+ K+ T V IT CGNF +
Sbjct: 452 ARESDWDGIIACHQGKLSCSTWNYQRSTIGAYFLKPKELKK-DDITATAVDITSCGNFAV 510
Query: 429 IGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF 488
IG SSG +D +N+QSG HRGS+G D H G +RGV D LNQ+ IS G++ +K W+F
Sbjct: 511 IGLSSGTIDVYNMQSGIHRGSFGKDQ--AHKGSIRGVAVDGLNQLTISAGSEGLLKFWNF 568
Query: 489 KQTGKPPLRSIKLDNGISFFRTHQESS-MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQL 547
K K + S+ LD+ + H++SS +L + LDDF+++++DI+T I+R+ SGH GQ+
Sbjct: 569 KN--KILIHSVSLDSSPNMMLLHRDSSGILGLALDDFSISVLDIETRKIVREFSGHQGQI 626
Query: 548 TDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
D FSPD RWLI+ASMDC+IR WD+PS LID F
Sbjct: 627 NDMAFSPDGRWLISASMDCSIRTWDLPSGCLIDSF 661
Score = 346 (126.9 bits), Expect = 2.1e-28, P = 2.1e-28
Identities = 88/305 (28%), Positives = 152/305 (49%)
Query: 18 IFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDIT 77
+F RALG SN +P V RF ++ TCVGK+ H Y L++VS DI
Sbjct: 69 LFAGFRALGLFSNDIPHVVRFSALKRRFFVTTCVGKSLHTYDVQKLSLVAVSNSLPQDIC 128
Query: 78 CLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWD 137
C+++D ++ + N+ A+ R ++V T+KGH + +HL+ PFG H+ISVD +S + +W
Sbjct: 129 CMAADGRLVFAAYGNVFSAFARNKEVVHTFKGHKAEIHLLQPFGDHVISVDTDSVLIIWH 188
Query: 138 IKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL 197
I +EE YL+LSFD FKI +L PS ++ I +G + L N+ +++ L
Sbjct: 189 IYSEEEYLQLSFDKSVFKISA--------ILHPSTYLNKILLGSEQGSLQLWNVKSNKLL 240
Query: 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL 257
F VTAL + ++ G +G + + N++ + + ++ + + +
Sbjct: 241 YTFAGWKTGVTALQ-QAPAVDVVAVGLMSGQVIIHNIKFDETLMKFRQDWGPITSISFRT 299
Query: 258 YNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS 317
P++ SP + LW D D + ++R HS + F + +++ D+
Sbjct: 300 DGHPVMAAGSPCGHIGLW--DLEDKK-LINQMRNAHSTAIAGLTFL-HREPLLVTNGADN 355
Query: 318 TLRIF 322
LRI+
Sbjct: 356 ALRIW 360
>UNIPROTKB|Q8NI36 [details] [associations]
symbol:WDR36 "WD repeat-containing protein 36" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 GO:GO:0050896
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0032040
HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH EMBL:AF385437
EMBL:BC133025 EMBL:BC136517 EMBL:AK095312 IPI:IPI00169325
RefSeq:NP_644810.1 UniGene:Hs.533237 ProteinModelPortal:Q8NI36
SMR:Q8NI36 IntAct:Q8NI36 STRING:Q8NI36 PhosphoSite:Q8NI36
DMDM:46577504 PaxDb:Q8NI36 PeptideAtlas:Q8NI36 PRIDE:Q8NI36
Ensembl:ENST00000506538 Ensembl:ENST00000513710 GeneID:134430
KEGG:hsa:134430 UCSC:uc003kpd.3 CTD:134430 GeneCards:GC05P110427
HGNC:HGNC:30696 HPA:HPA037797 MIM:609669 MIM:609887
neXtProt:NX_Q8NI36 Orphanet:359 PharmGKB:PA134933637
HOVERGEN:HBG059718 InParanoid:Q8NI36 PhylomeDB:Q8NI36
GenomeRNAi:134430 NextBio:83377 ArrayExpress:Q8NI36 Bgee:Q8NI36
CleanEx:HS_WDR36 Genevestigator:Q8NI36 GermOnline:ENSG00000134987
Uniprot:Q8NI36
Length = 951
Score = 1025 (365.9 bits), Expect = 1.8e-103, P = 1.8e-103
Identities = 215/544 (39%), Positives = 321/544 (59%)
Query: 46 LFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYT-SANNIIYAWRRGID-- 102
L G F + N +++ H+ +I L HI + + I+ W +
Sbjct: 136 LVFAAYGNVFSAFARNK-EIVHTFKGHKAEIHFLQPFGDHIISVDTDGILIIWHIYSEEE 194
Query: 103 -IVGTYKGHTSPVHLILPFGPHLISV---DEESNVKVWDIKAEETYLELSFDNDTFKIMG 158
+ T+ + IL +L + E+ ++++W++K+ + L + TF G
Sbjct: 195 YLQLTFDKSVFKISAILHPSTYLNKILLGSEQGSLQLWNVKSNK----LLY---TFP--G 245
Query: 159 KRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPP 218
W V L+ +P VD++ +GL + ++I+HNI +E+LM+F Q WGP+T++SFRTDG P
Sbjct: 246 --WKVGVTALQQAPAVDVVAIGLMSGQVIIHNIKFNETLMKFRQDWGPITSISFRTDGHP 303
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
+M +GS GH+ +W+LED+++ NQ++ AH + G FL+ EPLLVT+ DN L++WIFD
Sbjct: 304 VMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGLTFLHREPLLVTNGADNALRIWIFD 363
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
G GRLLR R GHSAP I++YG + ILSA+ D TL+ F+T E NK+LG
Sbjct: 364 GPTGEGRLLRFRMGHSAPLTNIRYYGQNGQQILSASQDGTLQSFSTVHEKFNKSLGHGLI 423
Query: 339 XXXXXXXXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMD 398
M+ + LPP+++F+ ARE DW+ I A H GK S W++ KS +
Sbjct: 424 NKKRVKRKGLQNTMSVR--LPPITKFAAEEARESDWDGIIACHQGKLSCSTWNYQKSTIG 481
Query: 399 DMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGH 458
FL P+ K+ T V IT CGNF +IG SSG VD +N+QSG HRGS+G D H
Sbjct: 482 AYFLKPKELKK-DDITATAVDITSCGNFAVIGLSSGTVDVYNMQSGIHRGSFGKDQ--AH 538
Query: 459 VGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLA 518
G VRGV D LNQ+ ++ G++ +K W+FK K + S+ L + + H++S +L
Sbjct: 539 KGSVRGVAVDGLNQLTVTTGSEGLLKFWNFKN--KILIHSVSLSSSPNIMLLHRDSGILG 596
Query: 519 VCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ LDDF+++++DI+T I+R+ SGH GQ+ D FSPD RWLI+A+MDC+IR WD+PS L
Sbjct: 597 LALDDFSISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISAAMDCSIRTWDLPSGCL 656
Query: 579 IDCF 582
IDCF
Sbjct: 657 IDCF 660
Score = 342 (125.4 bits), Expect = 5.9e-28, P = 5.9e-28
Identities = 88/306 (28%), Positives = 152/306 (49%)
Query: 18 IFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDIT 77
+F RALG SN +P V RF ++ TCVGK+FH Y L++VS DI
Sbjct: 69 LFAGFRALGLFSNDIPHVVRFSALKRRFYVTTCVGKSFHTYDVQKLSLVAVSNSVPQDIC 128
Query: 78 CLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWD 137
C+++D ++ + N+ A+ R +IV T+KGH + +H + PFG H+ISVD + + +W
Sbjct: 129 CMAADGRLVFAAYGNVFSAFARNKEIVHTFKGHKAEIHFLQPFGDHIISVDTDGILIIWH 188
Query: 138 IKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL 197
I +EE YL+L+FD FKI +L PS ++ I +G + L N+ +++ L
Sbjct: 189 IYSEEEYLQLTFDKSVFKISA--------ILHPSTYLNKILLGSEQGSLQLWNVKSNKLL 240
Query: 198 MEFIQTWGP-VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF 256
F W VTAL + ++ G +G + + N++ + + ++ + + +
Sbjct: 241 YTF-PGWKVGVTALQ-QAPAVDVVAIGLMSGQVIIHNIKFNETLMKFRQDWGPITSISFR 298
Query: 257 LYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD 316
P++ SP + LW D D + ++R HS + F + +++ D
Sbjct: 299 TDGHPVMAAGSPCGHIGLW--DLEDKK-LINQMRNAHSTAIAGLTFL-HREPLLVTNGAD 354
Query: 317 STLRIF 322
+ LRI+
Sbjct: 355 NALRIW 360
>ZFIN|ZDB-GENE-030131-464 [details] [associations]
symbol:wdr36 "WD repeat domain 36" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA;IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-464
GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364
GO:GO:0032040 HOGENOM:HOG000217777 HOVERGEN:HBG059718 EMBL:BC164036
IPI:IPI00481400 UniGene:Dr.4799 ProteinModelPortal:B5DDC5
STRING:B5DDC5 ArrayExpress:B5DDC5 Uniprot:B5DDC5
Length = 904
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 208/455 (45%), Positives = 286/455 (62%)
Query: 130 ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILH 189
+ ++++W+IK+ + L F TF G W++ V VL+ +P VD++GVGL++ +II+H
Sbjct: 178 QGSLQLWNIKSNK----LLF---TFS--G--WSAAVTVLQQTPAVDVVGVGLASGQIIIH 226
Query: 190 NILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRK 249
NI DE+LM+F Q WGP+TALSFRTDG P+M SGS GH+ +W+LE++++ +Q++ AH
Sbjct: 227 NIKFDETLMKFQQDWGPITALSFRTDGHPIMASGSPIGHIGLWDLEEKKLVSQMRDAHTT 286
Query: 250 VVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN 309
+ G FL NEPLL+T+ DN +++WIFD A G+GRLLR R GHSAPP I+ Y S N
Sbjct: 287 AIAGLTFLQNEPLLITNGADNAIRVWIFDVAGGDGRLLRQRMGHSAPPTKIRHYDQSGLN 346
Query: 310 ILSAAGDSTLRIFNTKSETSNKNLGIASAXXXXXXXXXXXEKMNEKFILPPVSQFSFGLA 369
ILSA D TL+ F+T E NK+LG + + LP ++ F+ A
Sbjct: 347 ILSAGQDGTLQSFSTVHERFNKSLGHGTLNKAKAKKKGVKYDTAK---LPSITTFASETA 403
Query: 370 REKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSK--PTCVYITHCGNFV 427
R+ DW+ I A H G + W++ K M L PER + + T V I+ CGNF
Sbjct: 404 RQSDWDGIIACHRGFLMTTSWNYQKGSMGAHKLEPERFNRNRSLNVHATAVDISSCGNFA 463
Query: 428 LIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487
+I SSGH+D +N+QSG HRG YG D H G VRGV D LNQ+ S G D +K+W
Sbjct: 464 VIALSSGHIDVYNMQSGLHRGHYGEDK--AHEGPVRGVAVDALNQLTFSVGADHLLKIWK 521
Query: 488 FKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQL 547
FK K L + +L + H++S MLA+ LD F ++I+D++T I+RK SGH GQ+
Sbjct: 522 FKS--KEHLHTHRLPAAPASSLLHRDSGMLAIALDVFAIHILDVETRRIVRKFSGHRGQI 579
Query: 548 TDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
D FSPD RWLITASMDCTIR WD+PS L+DCF
Sbjct: 580 NDMTFSPDGRWLITASMDCTIRTWDLPSGSLVDCF 614
Score = 360 (131.8 bits), Expect = 4.6e-30, P = 4.6e-30
Identities = 86/305 (28%), Positives = 160/305 (52%)
Query: 18 IFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDIT 77
IF RALG SNHL V RF ++ +E VT VG+ FH Y +++VS +DI+
Sbjct: 21 IFSGFRALGLYSNHLAHVVRFHKKHREFYVVTAVGQCFHTYNVKKLGIVAVSNALPEDIS 80
Query: 78 CLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWD 137
+++D +Y + +I A+ R ++V TY GH + VHL+LPFG HLISVD+++ V +WD
Sbjct: 81 SVTADCMLVYAAYGKLISAFARSREVVHTYTGHQADVHLLLPFGNHLISVDKDNVVIIWD 140
Query: 138 IKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL 197
+++E+TYL++S+D +F++ ++ PS ++ I G S + L NI +++ L
Sbjct: 141 VESEDTYLQISYDKASFEVSA--------LMHPSTYLNKILFGSSQGSLQLWNIKSNKLL 192
Query: 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL 257
F W + +T ++ G +G + + N++ + + ++ + +
Sbjct: 193 FTF-SGWSAAVTVLQQTPAVDVVGVGLASGQIIIHNIKFDETLMKFQQDWGPITALSFRT 251
Query: 258 YNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS 317
P++ + SP + LW ++ + ++R+ H+ + F N I + A D+
Sbjct: 252 DGHPIMASGSPIGHIGLWDLEEKK---LVSQMRDAHTTAIAGLTFLQNEPLLITNGA-DN 307
Query: 318 TLRIF 322
+R++
Sbjct: 308 AIRVW 312
>UNIPROTKB|G3X6I6 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007319 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364
GO:GO:0032040 GeneTree:ENSGT00390000004976 OMA:DGIIACH
EMBL:DAAA02029634 Ensembl:ENSBTAT00000007218 Uniprot:G3X6I6
Length = 948
Score = 1023 (365.2 bits), Expect = 2.9e-103, P = 2.9e-103
Identities = 204/455 (44%), Positives = 291/455 (63%)
Query: 129 EESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIIL 188
E+ ++++W++K+ + L + TF G W V L+ +P VD++ VGL + ++I+
Sbjct: 221 EQGSLQLWNVKSNK----LLY---TFA--G--WKVGVTALQQAPAVDVVAVGLMSGQVII 269
Query: 189 HNILTDESLMEFIQTWGPVTALSFRT-DGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAH 247
HNI DE+LM+F Q WGP+T++SFRT DG P+M +GS GH+ +W+LED+++ NQ++ AH
Sbjct: 270 HNIKFDETLMKFRQDWGPITSISFRTADGHPVMAAGSPCGHIGLWDLEDKKLINQMRNAH 329
Query: 248 RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSS 307
+ G FL+ EPLLVT+ DN L++WIFD G GRLLR R GHSAP I++YG +
Sbjct: 330 STAIAGLTFLHREPLLVTNGADNALRIWIFDGPAGEGRLLRFRMGHSAPLTRIRYYGQNG 389
Query: 308 DNILSAAGDSTLRIFNTKSETSNKNLGIASAXXXXXXXXXXXEKMNEKFILPPVSQFSFG 367
+ILSA+ D TL+ F+T E NK+LG M+ + LPPV++F+
Sbjct: 390 QHILSASQDGTLQSFSTVHEKFNKSLGHGLINKKRVKRKGLQNTMSVR--LPPVTEFAAE 447
Query: 368 LAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFV 427
ARE DW+ I A H GK S W++ +S + FL P K + T V IT CGNF
Sbjct: 448 EARESDWDGIVACHQGKLSCSTWNYQRSTIGAHFLRPAGLK-TDSTTATAVDITSCGNFA 506
Query: 428 LIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487
+IG SSG VD +N+QSG HRGS+G D H G VRGV D LNQ+ I+ G++ +K W+
Sbjct: 507 VIGLSSGAVDVYNMQSGIHRGSFGRDQ--AHKGSVRGVAVDGLNQLTITAGSEGVLKFWN 564
Query: 488 FKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQL 547
FK K + S+ LD+ + H++S +L + LDDF+++++DI+T I+R+ SGH GQ+
Sbjct: 565 FKN--KVLIHSVSLDSSPNLMLLHRDSGILGLALDDFSISVLDIETRKIVREFSGHQGQI 622
Query: 548 TDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
D FSPD RWLI+ASMDC+IR WD+PS LID F
Sbjct: 623 NDMTFSPDGRWLISASMDCSIRTWDLPSGCLIDSF 657
Score = 331 (121.6 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 88/307 (28%), Positives = 152/307 (49%)
Query: 18 IFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDIT 77
+F RALG S+ +P RF ++ TCVGK+FH Y L++VS DI
Sbjct: 65 LFAGFRALGLFSSDIPHAVRFSALKRRFYVTTCVGKSFHTYDVQKLSLVAVSNSLPQDIC 124
Query: 78 CLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWD 137
C+++D ++ + N+ A+ R ++V T+KGH + +HL+ PFG H+ISVD +S + +W
Sbjct: 125 CMAADGRLVFAAYGNVFSAFARNKEVVHTFKGHKAEIHLLQPFGDHVISVDTDSVLIIWH 184
Query: 138 IKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL 197
I +EE YL+L FD FKI +L PS ++ I +G + L N+ +++ L
Sbjct: 185 IYSEEEYLQLPFDKSVFKISA--------ILHPSTYLNKILLGSEQGSLQLWNVKSNKLL 236
Query: 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL 257
F VTAL + ++ G +G + + N++ + + ++ + T F
Sbjct: 237 YTFAGWKVGVTALQ-QAPAVDVVAVGLMSGQVIIHNIKFDETLMKFRQDWGPI-TSISFR 294
Query: 258 YNE--PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG 315
+ P++ SP + LW D D + ++R HS + F + +++
Sbjct: 295 TADGHPVMAAGSPCGHIGLW--DLEDKK-LINQMRNAHSTAIAGLTFL-HREPLLVTNGA 350
Query: 316 DSTLRIF 322
D+ LRI+
Sbjct: 351 DNALRIW 357
>UNIPROTKB|F1NKR5 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0003824 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364 GO:GO:0032040
SUPFAM:SSF50952 GeneTree:ENSGT00390000004976 OMA:DGIIACH
EMBL:AADN02056073 EMBL:AADN02056074 EMBL:AADN02056075
EMBL:AADN02056076 EMBL:AADN02056077 EMBL:AADN02056078
IPI:IPI00599626 ProteinModelPortal:F1NKR5
Ensembl:ENSGALT00000000326 Uniprot:F1NKR5
Length = 890
Score = 994 (355.0 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 213/548 (38%), Positives = 309/548 (56%)
Query: 46 LFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYT-SANNIIYAW-----RR 99
L G FH N +++ H+ I L HI + N++ W
Sbjct: 75 LIFASYGNVFHAIARNK-EVVHTYEGHKARIHLLQPFGDHIISVDVANVLIVWDIQSEEE 133
Query: 100 GIDIVGTYKGHTSPVHLILPFGPHLISV---DEESNVKVWDIKAEETYLELSFDNDTFKI 156
+ +V + T V IL +L + E+ +++W+I++ + L SF
Sbjct: 134 YLQVV--FDKATFAVSAILHPSTYLNKILLGSEQGGLQLWNIRSNK--LLYSFPG----- 184
Query: 157 MGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDG 216
W V L +P VD+I VGL + II+HNI DE+LM+F Q WGP+TA+SFRTDG
Sbjct: 185 ----WGLGVTTLAQAPAVDVIAVGLVSGHIIIHNIKFDETLMKFQQDWGPITAISFRTDG 240
Query: 217 PPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWI 276
P+M +GS GH+ +W+LE++++ +Q++ AH V G F+ EPLL+T+ DN +++WI
Sbjct: 241 HPVMAAGSPVGHIALWDLEEKKLMSQMRNAHSTAVAGMSFVPGEPLLITNGADNAIRVWI 300
Query: 277 FDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIA 336
FD G GR+LR R GHSAPP I+++G + + ILSA D TL+ F+T E NK+LG
Sbjct: 301 FDGPGGTGRVLRSRMGHSAPPTKIRYHGQNGEQILSAGQDGTLQSFSTVHERFNKSLGRG 360
Query: 337 SAXXXXXXXXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSK 396
S ++ LPP++ F+ +A + DW+ I A H G + W++ K+
Sbjct: 361 SINKKKSKKKGL---QHDTMALPPITAFASEVAHQNDWDGIIACHQGYITCTTWNYQKTS 417
Query: 397 MDDMFLVPERCKQAKQSK--PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDN 454
M L PE + K T V IT CGNF +IG S+G VD +N+QSG HRG YG +
Sbjct: 418 MGAHKLRPEEFSKNKPIDIYATAVDITTCGNFAVIGMSTGQVDVYNMQSGIHRGRYGREK 477
Query: 455 QPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQES 514
H G +RGV D LNQ+ I+ G+D +K W FK K + S L + S H++S
Sbjct: 478 --AHEGSIRGVAVDGLNQLTITAGSDGLIKFWKFK--AKDLVHSTDLSSSPSGILLHRDS 533
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
+L + DDF+++++DI+T I+RK SGH G++ D FSPD RWLIT+SMDCTI+ WD+P
Sbjct: 534 GILGIAFDDFSISVLDIETWKIVRKFSGHHGRINDMTFSPDGRWLITSSMDCTIKTWDLP 593
Query: 575 SSQLIDCF 582
S LIDCF
Sbjct: 594 SGCLIDCF 601
Score = 343 (125.8 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 89/306 (29%), Positives = 155/306 (50%)
Query: 18 IFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDIT 77
+F RALG S+H+P V R+ R +E T VG++ H Y +++VS DIT
Sbjct: 8 LFAGFRALGRYSSHVPHVLRYHGRPREFYVATAVGRSVHTYNVKKLGIVAVSNALLQDIT 67
Query: 78 CLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWD 137
CL++D I+ S N+ +A R ++V TY+GH + +HL+ PFG H+ISVD + + VWD
Sbjct: 68 CLAADRMLIFASYGNVFHAIARNKEVVHTYEGHKARIHLLQPFGDHIISVDVANVLIVWD 127
Query: 138 IKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL 197
I++EE YL++ FD TF + +L PS ++ I +G + L NI +++ L
Sbjct: 128 IQSEEEYLQVVFDKATFAVSA--------ILHPSTYLNKILLGSEQGGLQLWNIRSNKLL 179
Query: 198 MEFIQTWG-PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF 256
F WG VT L+ + ++ G +GH+ + N++ + + ++ + +
Sbjct: 180 YSF-PGWGLGVTTLA-QAPAVDVIAVGLVSGHIIIHNIKFDETLMKFQQDWGPITAISFR 237
Query: 257 LYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD 316
P++ SP + LW ++ + ++R HS + F I + A D
Sbjct: 238 TDGHPVMAAGSPVGHIALWDLEEKK---LMSQMRNAHSTAVAGMSFVPGEPLLITNGA-D 293
Query: 317 STLRIF 322
+ +R++
Sbjct: 294 NAIRVW 299
Score = 39 (18.8 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 546 QLTDADFSPDSRWLITASMD 565
QL P+SRW S+D
Sbjct: 690 QLVTLSLLPESRWKNLLSLD 709
>TAIR|locus:2135393 [details] [associations]
symbol:AT4G04940 "AT4G04940" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364
GO:GO:0032040 HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH
EMBL:AY059784 EMBL:AY096634 IPI:IPI00522649 RefSeq:NP_567275.1
UniGene:At.4051 UniGene:At.4052 ProteinModelPortal:Q93YS7
SMR:Q93YS7 STRING:Q93YS7 PaxDb:Q93YS7 PRIDE:Q93YS7
EnsemblPlants:AT4G04940.1 GeneID:825833 KEGG:ath:AT4G04940
TAIR:At4g04940 InParanoid:Q93YS7 PhylomeDB:Q93YS7
ProtClustDB:CLSN2917508 Genevestigator:Q93YS7 Uniprot:Q93YS7
Length = 910
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 173/492 (35%), Positives = 270/492 (54%)
Query: 104 VGTYKG---HTSPV---HLILPFGP-HLISVDEESNVKVWDIKAEETYLELSFDNDTFKI 156
+ +KG H +P+ L F P ++ D N KV + ++E L+L ++ +T K+
Sbjct: 117 IWAFKGIEEHLAPIGNLQLTGKFTPTSIVHPDTYLN-KVL-VGSQEGPLQL-WNINTKKM 173
Query: 157 MG--KRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQ-TWGPVTALSFR 213
+ K W S V SP +D++ +G ++ KI +HNI DE ++ F + G VTALSF
Sbjct: 174 LYQFKGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVTFEHASRGAVTALSFS 233
Query: 214 TDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLK 273
TDG P++ SG + G +++WNL +++++ I+ AH + +FL NEP+L+++S DN+LK
Sbjct: 234 TDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLK 293
Query: 274 LWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
+WIFD DG+ RLLR R GHSAPP I+FY N +ILSA D R+F+ E ++ L
Sbjct: 294 MWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGR-HILSAGQDRAFRLFSVIQEQQSREL 352
Query: 334 GIASAXXXXXXXXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFY 393
E++ L PV F RE+DW N+ H + +W
Sbjct: 353 SQRHISRRAKKLRLKEEELK----LKPVVSFDCAEIRERDWCNVVTCHMDTAEAYVWRLQ 408
Query: 394 KSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY--- 450
+ + L P C + C I+ CGNF ++G + G ++RFN+QSG RGSY
Sbjct: 409 NFVLGEHILKP--CPENPTPIKACA-ISACGNFAVVGTAGGWIERFNLQSGISRGSYFDM 465
Query: 451 GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRT 510
+ H G V GV D+ N ++IS G +KVW FK K L+S + D G S +
Sbjct: 466 SEKRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWDFK---KRELKS-QWDVGCSLVKI 521
Query: 511 --HQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
H+ + +LA DDF + + D+ T ++R+ GH ++TD FS D +W+I++SMD ++
Sbjct: 522 VYHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSL 581
Query: 569 RVWDIPSSQLID 580
R+WD+ ++ ID
Sbjct: 582 RIWDVILAKQID 593
Score = 274 (101.5 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 88/312 (28%), Positives = 148/312 (47%)
Query: 18 IFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDIT 77
IF RA+GY+++ +P + R ET VGKAF +Y C L+ +SPQ I
Sbjct: 3 IFEPFRAIGYITSTVPFSVQ--RLGTETFVTVSVGKAFQIYNCAKLNLVIISPQLPKKIR 60
Query: 78 CLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWD 137
L+S + + + N I +RR V T+ H + V L+L FG H++S+D E N+ +W
Sbjct: 61 ALASYRDYTFVAFGNEIAVFRRAHQ-VATWSKHVAKVDLLLVFGEHVLSLDVEGNMFIWA 119
Query: 138 IKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL 197
K E +L N ++ GK + +++ P ++ + VG + L NI T + L
Sbjct: 120 FKGIEEHLA-PIGN--LQLTGKF--TPTSIVHPDTYLNKVLVGSQEGPLQLWNINTKKML 174
Query: 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE-DRQVENQIKKAHRKVVTGAHF 256
+F + WG + ++ G G + V N++ D ++ + A R VT F
Sbjct: 175 YQF-KGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVT-FEHASRGAVTALSF 232
Query: 257 LYN-EPLLVTSSPDNTLKLWIFDKADGNGRLLR-IREGHSAPPNYIQFYGNSSDNILSAA 314
+ PLL + + +W +K RL IR+ H + + F N ++SA+
Sbjct: 233 STDGRPLLASGGSFGVISIWNLNKK----RLQSVIRDAHDSSIISLNFLANEPV-LMSAS 287
Query: 315 GDSTLR--IFNT 324
D++L+ IF+T
Sbjct: 288 ADNSLKMWIFDT 299
>POMBASE|SPCC1672.07 [details] [associations]
symbol:SPCC1672.07 "U3 snoRNP-associated protein Utp21
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=NAS] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=ISO]
[GO:0005819 "spindle" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0032153
"cell division site" evidence=IDA] [GO:0044732 "mitotic spindle
pole body" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPCC1672.07
GO:GO:0005829 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672 GO:GO:0032153
GO:GO:0044732 eggNOG:COG2319 GO:GO:0006364 GO:GO:0032040
GO:GO:0005732 HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH
OrthoDB:EOG46T68Q PIR:T41051 RefSeq:NP_587878.1
ProteinModelPortal:O14053 STRING:O14053 EnsemblFungi:SPCC1672.07.1
GeneID:2539299 KEGG:spo:SPCC1672.07 NextBio:20800466 Uniprot:O14053
Length = 902
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 151/416 (36%), Positives = 229/416 (55%)
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS 224
+ L +PV+D++ VG + +I++ N+ LMEF Q G V + SFRTDG P++ S +
Sbjct: 207 ITSLTQAPVLDVLAVGTISGRIVIFNLKNGSILMEFKQD-GQVLSCSFRTDGTPILASSN 265
Query: 225 NTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNG 284
G L+ W+L R+++N AH + FL +P+LVT+ PDN+LK WIFD DG
Sbjct: 266 PIGDLSFWDLSKRRIQNVTYNAHFGSLPKIQFLNGQPILVTAGPDNSLKEWIFDSMDGAP 325
Query: 285 RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAXXXXXX 344
R+LR R GH PP++++FYG S ++SAA D +LR + ++ + L S
Sbjct: 326 RILRSRNGHYEPPSFVKFYGKSVHFLISAATDRSLRAVSLYQDSQSTELSQGSVISKAKK 385
Query: 345 XXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVP 404
E++ LP ++ S REK W+N+ H + W+ +KSK ++P
Sbjct: 386 LNVRPEELK----LPEITALSSSNTREKYWDNVLTAHKNDSSARTWN-WKSKTLGQHVLP 440
Query: 405 ERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRG 464
+ CV + CGNF LIG S G VD +N+QSG R S+G + G V
Sbjct: 441 T--SDGTSVRSVCV--SCCGNFGLIGSSKGVVDVYNMQSGIKRKSFGQSSLSGKP--VTA 494
Query: 465 VVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDF 524
V+ DN+N+I+++ D +K W F + + S+ + + I+ S ++AV DDF
Sbjct: 495 VMLDNVNRILVTASLDGILKFWDFNKGNL--IDSLDVGSSITHAIYQHSSDLVAVACDDF 552
Query: 525 TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLID 580
+ I+D+ T I+R+L GH +LT DFS RWL+TAS+D TIR WD+P+ LID
Sbjct: 553 GIRIVDVQTRKIVRELWGHSNRLTSFDFSDTGRWLVTASLDGTIRTWDLPTGHLID 608
Score = 218 (81.8 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 81/316 (25%), Positives = 150/316 (47%)
Query: 17 KIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDI 76
+I+ R++G+VSN +P R L T VG F Y C LL V Q + +I
Sbjct: 22 RIYAPFRSIGHVSNAVPFDIE--ARGTHFLVTTSVGNTFQTYDCEKLNLLFVGKQLDKEI 79
Query: 77 TCLSSDFFHIYTSANNIIYAWRRGIDI--VGTYKGHTSPVHLILPFGPHLISVDEESNVK 134
TCL S + +A + I+A++RG I + + H + HL FG +I+ +V
Sbjct: 80 TCLKSFKDFMLVAAGSKIFAYKRGKIIWDIDVEQEHGTVTHLDA-FGEWIIACTSSRHVY 138
Query: 135 VWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD 194
VW ++ + EL + TF + ++L PS ++ I +G S+ + + N+
Sbjct: 139 VWKHASKYSVPEL---HTTF--LPNTNADITSLLHPSTYLNKILLGFSDGALQIWNLRVS 193
Query: 195 ESLMEFIQTWGP-VTALSFRTDGPPM--MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVV 251
+ + EF + +G +T+L T P + + G+ +G + ++NL++ + + K+ +V+
Sbjct: 194 KRVHEFQEFFGDGITSL---TQAPVLDVLAVGTISGRIVIFNLKNGSILMEFKQ-DGQVL 249
Query: 252 TGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIR-EGHSAPPNYIQFYGNSSDNI 310
+ + P+L +S+P L W K R+ + H IQF N +
Sbjct: 250 SCSFRTDGTPILASSNPIGDLSFWDLSKR----RIQNVTYNAHFGSLPKIQFL-NGQPIL 304
Query: 311 LSAAGDSTLR--IFNT 324
++A D++L+ IF++
Sbjct: 305 VTAGPDNSLKEWIFDS 320
>SGD|S000004401 [details] [associations]
symbol:UTP21 "Subunit of U3-containing 90S preribosome and
SSU processome" species:4932 "Saccharomyces cerevisiae" [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA;IGI] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IC] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SGD:S000004401
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 EMBL:BK006945 InterPro:IPR011047 SUPFAM:SSF50998
EMBL:U19729 GO:GO:0006364 GO:GO:0032040 GO:GO:0042274 GO:GO:0034388
PIR:S55965 RefSeq:NP_013513.3 RefSeq:NP_058174.3
ProteinModelPortal:Q06078 SMR:Q06078 DIP:DIP-6416N IntAct:Q06078
MINT:MINT-561636 STRING:Q06078 PaxDb:Q06078 PeptideAtlas:Q06078
EnsemblFungi:YLR409C GeneID:851125 GeneID:851128 KEGG:sce:YLR409C
KEGG:sce:YLR410W-B CYGD:YLR409c GeneTree:ENSGT00390000004976
HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH OrthoDB:EOG46T68Q
NextBio:967857 Genevestigator:Q06078 GermOnline:YLR409C
Uniprot:Q06078
Length = 939
Score = 524 (189.5 bits), Expect = 5.1e-61, Sum P(2) = 5.1e-61
Identities = 134/428 (31%), Positives = 219/428 (51%)
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS 224
+ EP+PV+DII +G ++I+ N+ + + +++LSFRTDG + G+
Sbjct: 209 ITTAEPAPVLDIIALGTVTGEVIMFNMRKGKRIRTIKIPQSRISSLSFRTDGSSHLSVGT 268
Query: 225 NTGHLTVWNLEDRQVENQIKKAHRKV---VTGAHFLYNEPLLVTSSPDNTLKLWIFDKA- 280
++G L ++L+ R + +K HR+ VT A FL +P++VTS DN+LK ++FD +
Sbjct: 269 SSGDLIFYDLDRRSRIHVLKNIHRESYGGVTQATFLNGQPIIVTSGGDNSLKEYVFDPSL 328
Query: 281 -DGNG-------RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKN 332
G+G R LR R GHS PP+YI F + S +LSA+ D +L F+ + + ++
Sbjct: 329 SQGSGDVVVQPPRYLRSRGGHSQPPSYIAFADSQSHFMLSASKDRSLWSFSLRKDAQSQE 388
Query: 333 LGIASAXXXXXXXXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSF 392
+ + KF P + + AR +W NI H + W
Sbjct: 389 MS-QRLHKKQDGGRVGGSTIKSKF--PEIVALAIENARIGEWENIITAHKDEKFARTWDM 445
Query: 393 YKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGH 452
++K + +S V ++ CGNF IG S+G + +N+QSG R Y
Sbjct: 446 -RNKRVGRWTFDTTDDGFVKS----VAMSQCGNFGFIGSSNGSITIYNMQSGILRKKYKL 500
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ 512
H V G+ D +N+ ++S G D V + F ++ L +KLD I+ H+
Sbjct: 501 -----HKRAVTGISLDGMNRKMVSCGLDGIVGFYDFNKSTL--LGKLKLDAPITAMVYHR 553
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
S + A+ LDD ++ +ID T ++R+L GH ++T DFSP+ RW+++AS+D TIR WD
Sbjct: 554 SSDLFALALDDLSIVVIDAVTQRVVRQLWGHSNRITAFDFSPEGRWIVSASLDSTIRTWD 613
Query: 573 IPSSQLID 580
+P+ ID
Sbjct: 614 LPTGGCID 621
Score = 134 (52.2 bits), Expect = 5.1e-61, Sum P(2) = 5.1e-61
Identities = 37/123 (30%), Positives = 64/123 (52%)
Query: 17 KIFLRHRALGYVSNHLPVVARFIRRRKETLF-VTCVGKAFHVYGCNHFKLLSVSPQHE-D 74
KIF R +G VSN +P + T + VTCVGK F +Y N LL VS +
Sbjct: 22 KIFSPFRIIGNVSNGVPFATGTLG---STFYIVTCVGKTFQIYDANTLHLLFVSEKETPS 78
Query: 75 DITCLSSDFFHIYTSANNIIYAWRRGIDI-VGTYKGHTSPVHLILPFGPHLISVDEESNV 133
I LS+ F ++Y + N + ++RGI+ + + + HL + FG +L + +++++
Sbjct: 79 SIVALSAHFHYVYAAYENKVGIYKRGIEEHLLELETDANVEHLCI-FGDYLCASTDDNSI 137
Query: 134 KVW 136
++
Sbjct: 138 FIY 140
>CGD|CAL0005566 [details] [associations]
symbol:UTP21 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0034388 "Pwp2p-containing subcomplex
of 90S preribosome" evidence=IEA] [GO:0005816 "spindle pole body"
evidence=IEA] [GO:0032153 "cell division site" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005566
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACQ01000008
EMBL:AACQ01000007 GO:GO:0006364 GO:GO:0032040 KO:K14554
RefSeq:XP_722467.1 RefSeq:XP_722608.1 ProteinModelPortal:Q5ALL2
STRING:Q5ALL2 GeneID:3635757 GeneID:3635913 KEGG:cal:CaO19.1566
KEGG:cal:CaO19.9139 Uniprot:Q5ALL2
Length = 942
Score = 533 (192.7 bits), Expect = 1.6e-50, P = 1.6e-50
Identities = 140/435 (32%), Positives = 217/435 (49%)
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGP-----VTALSFRTDGPPM 219
++ +E +PV+D+I VG SN + L NI + L + I T G V ++SFRTDG P
Sbjct: 217 ISSIEAAPVLDVIAVGTSNGNVFLFNIKKGKVLGQKIITSGTESSSKVASISFRTDGAPH 276
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKV---VTGAHFLYNEPLLVTSSPDNTLKLWI 276
+V+G N G L ++L+ + + ++ AH++ V A FL +P+++++ DN LK ++
Sbjct: 277 LVAGLNNGDLYFYDLDKKSRVHVLRNAHKETHGGVANAKFLNGQPIVLSNGGDNHLKEFV 336
Query: 277 FDK--ADGNG------RLLRIREGHSAPPNYIQFYGNSSDN-ILSAAGDSTLRIFNTKSE 327
FD N R LR R GHSAPP I+F + +LSA+ D T F+ + +
Sbjct: 337 FDPNLTTSNSSIVPPPRHLRSRGGHSAPPVAIEFPQEDKTHFLLSASRDKTFWTFSLRKD 396
Query: 328 TSNKNLGIA-SAXXXXXXXXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNK 386
+ + M EKF P + S ARE DW NI H +
Sbjct: 397 AQAQEMSQRLQKSKDGKRQAGQVVSMREKF--PEIISISSSYAREGDWENIITAHKDETF 454
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
W ++ L K CV + CGNF L+G SSG + +N+QSG
Sbjct: 455 ARTWDSRNKRVGRHLL---NTIDGGIVKSVCV--SQCGNFGLVGSSSGGIGSYNLQSGLL 509
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPP-LRSIKLDNGI 505
R Y Q V G+ D +N+ ++S G D V + F GK L ++L+ I
Sbjct: 510 RKKYVLHKQ-----AVTGLAIDGMNRKMVSCGLDGIVGFYDF---GKSVYLGKLQLEAPI 561
Query: 506 SFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMD 565
+ H+ S ++A LDD ++ +ID+ T +IR L GH +++ DFSPD RW+++ ++D
Sbjct: 562 TSMIYHKSSDLVACALDDLSIVVIDVTTQKVIRILYGHTNRISGMDFSPDGRWIVSVALD 621
Query: 566 CTIRVWDIPSSQLID 580
T+R WD+P+ ID
Sbjct: 622 STLRTWDLPTGGCID 636
Score = 146 (56.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 82/332 (24%), Positives = 146/332 (43%)
Query: 17 KIFLRHRALGYVSNHLPVVARFIRRRKETLF-VTCVGKAFHVYGCNHFKLLSVSP-QHED 74
KIF R LG V++ P + T + VT VG++F +Y LL VS Q
Sbjct: 27 KIFSPFRVLGNVTDSTPFAMGTLG---STFYAVTSVGRSFQIYDLATLHLLFVSQTQTPS 83
Query: 75 DITCLSSDFFHIYTSANNIIYAWRRG-IDIVGTYKGHTSPVHLILPFGPHLISVDEESNV 133
ITCL++ +Y S + I +RRG ++ +G+ S V+ +L FG +LI+ E ++
Sbjct: 84 RITCLAAHHHFVYASYGDRIGIFRRGRLEHELVCEGN-STVNQLLVFGEYLIATTLEGDI 142
Query: 134 KVWDIKAEETYLELSFDNDTFKIMGKRWNS-CVNVLEPSPVVDIIGVGLSNKKIILHNIL 192
V+ K E T +I+ V ++ P ++ + V + ++ N+
Sbjct: 143 FVFR-KTEGKKFPTELYT-TIRIINSLVEGEIVGLIHPPTYLNKVIVATTQSVFVI-NVR 199
Query: 193 TDESLMEFIQTWGPVTALSFRTDGPPMMVS--GSNTGHLTVWNLEDRQVENQI-----KK 245
T + L + + +S P + V G++ G++ ++N++ +V Q +
Sbjct: 200 TGKLLYKSRELQFEGEKISSIEAAPVLDVIAVGTSNGNVFLFNIKKGKVLGQKIITSGTE 259
Query: 246 AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI--REGHSAPPNYIQFY 303
+ KV + + P LV + L + DK +LR +E H N +F
Sbjct: 260 SSSKVASISFRTDGAPHLVAGLNNGDLYFYDLDKKS-RVHVLRNAHKETHGGVAN-AKFL 317
Query: 304 GNSSDNILSAAGDSTLR--IFNTKSETSNKNL 333
N +LS GD+ L+ +F+ TSN ++
Sbjct: 318 -NGQPIVLSNGGDNHLKEFVFDPNLTTSNSSI 348
Score = 39 (18.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 377 IAAIHTGKNKVSLWS 391
+A H N VSLW+
Sbjct: 656 LATTHVSGNGVSLWT 670
>UNIPROTKB|Q5ALL2 [details] [associations]
symbol:UTP21 "Putative uncharacterized protein UTP21"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005566
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACQ01000008
EMBL:AACQ01000007 GO:GO:0006364 GO:GO:0032040 KO:K14554
RefSeq:XP_722467.1 RefSeq:XP_722608.1 ProteinModelPortal:Q5ALL2
STRING:Q5ALL2 GeneID:3635757 GeneID:3635913 KEGG:cal:CaO19.1566
KEGG:cal:CaO19.9139 Uniprot:Q5ALL2
Length = 942
Score = 533 (192.7 bits), Expect = 1.6e-50, P = 1.6e-50
Identities = 140/435 (32%), Positives = 217/435 (49%)
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGP-----VTALSFRTDGPPM 219
++ +E +PV+D+I VG SN + L NI + L + I T G V ++SFRTDG P
Sbjct: 217 ISSIEAAPVLDVIAVGTSNGNVFLFNIKKGKVLGQKIITSGTESSSKVASISFRTDGAPH 276
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKV---VTGAHFLYNEPLLVTSSPDNTLKLWI 276
+V+G N G L ++L+ + + ++ AH++ V A FL +P+++++ DN LK ++
Sbjct: 277 LVAGLNNGDLYFYDLDKKSRVHVLRNAHKETHGGVANAKFLNGQPIVLSNGGDNHLKEFV 336
Query: 277 FDK--ADGNG------RLLRIREGHSAPPNYIQFYGNSSDN-ILSAAGDSTLRIFNTKSE 327
FD N R LR R GHSAPP I+F + +LSA+ D T F+ + +
Sbjct: 337 FDPNLTTSNSSIVPPPRHLRSRGGHSAPPVAIEFPQEDKTHFLLSASRDKTFWTFSLRKD 396
Query: 328 TSNKNLGIA-SAXXXXXXXXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNK 386
+ + M EKF P + S ARE DW NI H +
Sbjct: 397 AQAQEMSQRLQKSKDGKRQAGQVVSMREKF--PEIISISSSYAREGDWENIITAHKDETF 454
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
W ++ L K CV + CGNF L+G SSG + +N+QSG
Sbjct: 455 ARTWDSRNKRVGRHLL---NTIDGGIVKSVCV--SQCGNFGLVGSSSGGIGSYNLQSGLL 509
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPP-LRSIKLDNGI 505
R Y Q V G+ D +N+ ++S G D V + F GK L ++L+ I
Sbjct: 510 RKKYVLHKQ-----AVTGLAIDGMNRKMVSCGLDGIVGFYDF---GKSVYLGKLQLEAPI 561
Query: 506 SFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMD 565
+ H+ S ++A LDD ++ +ID+ T +IR L GH +++ DFSPD RW+++ ++D
Sbjct: 562 TSMIYHKSSDLVACALDDLSIVVIDVTTQKVIRILYGHTNRISGMDFSPDGRWIVSVALD 621
Query: 566 CTIRVWDIPSSQLID 580
T+R WD+P+ ID
Sbjct: 622 STLRTWDLPTGGCID 636
Score = 146 (56.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 82/332 (24%), Positives = 146/332 (43%)
Query: 17 KIFLRHRALGYVSNHLPVVARFIRRRKETLF-VTCVGKAFHVYGCNHFKLLSVSP-QHED 74
KIF R LG V++ P + T + VT VG++F +Y LL VS Q
Sbjct: 27 KIFSPFRVLGNVTDSTPFAMGTLG---STFYAVTSVGRSFQIYDLATLHLLFVSQTQTPS 83
Query: 75 DITCLSSDFFHIYTSANNIIYAWRRG-IDIVGTYKGHTSPVHLILPFGPHLISVDEESNV 133
ITCL++ +Y S + I +RRG ++ +G+ S V+ +L FG +LI+ E ++
Sbjct: 84 RITCLAAHHHFVYASYGDRIGIFRRGRLEHELVCEGN-STVNQLLVFGEYLIATTLEGDI 142
Query: 134 KVWDIKAEETYLELSFDNDTFKIMGKRWNS-CVNVLEPSPVVDIIGVGLSNKKIILHNIL 192
V+ K E T +I+ V ++ P ++ + V + ++ N+
Sbjct: 143 FVFR-KTEGKKFPTELYT-TIRIINSLVEGEIVGLIHPPTYLNKVIVATTQSVFVI-NVR 199
Query: 193 TDESLMEFIQTWGPVTALSFRTDGPPMMVS--GSNTGHLTVWNLEDRQVENQI-----KK 245
T + L + + +S P + V G++ G++ ++N++ +V Q +
Sbjct: 200 TGKLLYKSRELQFEGEKISSIEAAPVLDVIAVGTSNGNVFLFNIKKGKVLGQKIITSGTE 259
Query: 246 AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI--REGHSAPPNYIQFY 303
+ KV + + P LV + L + DK +LR +E H N +F
Sbjct: 260 SSSKVASISFRTDGAPHLVAGLNNGDLYFYDLDKKS-RVHVLRNAHKETHGGVAN-AKFL 317
Query: 304 GNSSDNILSAAGDSTLR--IFNTKSETSNKNL 333
N +LS GD+ L+ +F+ TSN ++
Sbjct: 318 -NGQPIVLSNGGDNHLKEFVFDPNLTTSNSSI 348
Score = 39 (18.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 377 IAAIHTGKNKVSLWS 391
+A H N VSLW+
Sbjct: 656 LATTHVSGNGVSLWT 670
>WB|WBGene00012887 [details] [associations]
symbol:Y45F10D.7 species:6239 "Caenorhabditis elegans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007319 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR018391 SMART:SM00564 GO:GO:0006364 GO:GO:0032040
EMBL:AL021492 GeneTree:ENSGT00390000004976 OMA:DGIIACH
RefSeq:NP_502661.3 ProteinModelPortal:O62477 SMR:O62477
STRING:O62477 PaxDb:O62477 EnsemblMetazoa:Y45F10D.7 GeneID:178346
KEGG:cel:CELE_Y45F10D.7 UCSC:Y45F10D.7 CTD:178346
WormBase:Y45F10D.7 HOGENOM:HOG000175599 InParanoid:O62477
NextBio:900754 Uniprot:O62477
Length = 924
Score = 430 (156.4 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 96/296 (32%), Positives = 163/296 (55%)
Query: 159 KRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPP 218
+ ++S + ++E + +D++ VGL N +++L N+ D+ + F +T ++FR DG
Sbjct: 186 RSFDSRITIIEQTTALDVVVVGLENGEVMLFNVKMDKIITSFRHD-AKITNVAFRDDGES 244
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
MV+ G + VW+LE +++ +I H + +F+ EP+++++S DN+L+LWIFD
Sbjct: 245 TMVTADKNGTMAVWDLEKQELIGKITGIHSDEINCLYFVPGEPIMLSASLDNSLRLWIFD 304
Query: 279 KADGNGR-LLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIAS 337
ADG R L+R+ EGHS P I+F G D++LSA D ++R ++ S T + LG
Sbjct: 305 SADGMPRELVRL-EGHSKPCASIKFVGK--DHVLSAGKDGSIRKYDVSSLTMRQKLGTVG 361
Query: 338 AXXXXXXXXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKM 397
K+N++ + V++ +FG RE WNN+ K++ W +
Sbjct: 362 QGV----------KLNKE--VQNVAEMAFGWQREAAWNNVFCRQVNDTKITTWQTRNNTS 409
Query: 398 DDMFLVPERCKQAKQ---SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY 450
L +R K+ + T + ++ CGNFV IGYS+GH+D+FN QSG H S+
Sbjct: 410 GAFTLEHDRFKKKVDFIDANATALCVSPCGNFVFIGYSTGHIDQFNAQSGRHVHSF 465
Score = 149 (57.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 69/313 (22%), Positives = 140/313 (44%)
Query: 17 KIFLRHRALGYVSNHL-PVVARFIRRRKETLFVTC-VGKAFHVYGCNHFKLLSVSPQHED 74
++F +R LG V+ + P + +K L V C + Y + + +S D
Sbjct: 7 ELFAPYRFLGVVTGDVAPSIRSTFVAKKSALSVLCPIDNVIMQYNGKKLRAIGMSEPLSD 66
Query: 75 DITCLSSDFFHIYTS-ANNII-YAWRRGI-DIVGTYKGHTSPVHLILPFGPHLISVDEES 131
++ ++S ++ + NI A+ R I D + G + + ++ G LI+VD S
Sbjct: 67 KVSAVASSSTSVFAAHGTNITSLAFCRDIKDSIDL--G--AKIKIMTLIGTQLIAVDISS 122
Query: 132 NVKVWDIKAEETYLELSFD-NDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHN 190
+ V D + L + +D F+I + PS ++ I VG S ++ + N
Sbjct: 123 GIHVIDTSEGGLQMSLLMEGSDDFEITA--------ICHPSTYLNKIVVGSSTGRMKIIN 174
Query: 191 ILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKV 250
T + + EF +++ + +T ++V G G + ++N++ ++ + H
Sbjct: 175 FRTGKVIHEFQRSFDSRITIIEQTTALDVVVVGLENGEVMLFNVKMDKIITSFR--HDAK 232
Query: 251 VTGAHFLYN-EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN 309
+T F + E +VT+ + T+ +W +K + G++ I HS N + F
Sbjct: 233 ITNVAFRDDGESTMVTADKNGTMAVWDLEKQELIGKITGI---HSDEINCLYFVPGEPI- 288
Query: 310 ILSAAGDSTLRIF 322
+LSA+ D++LR++
Sbjct: 289 MLSASLDNSLRLW 301
Score = 95 (38.5 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 527 NIIDIDT-CTIIRKLSGHMGQLTDA-DFSPDSRWLITASMDCTIRVWDIPSSQLID 580
++I +DT C + + +G +A FS D +WL+ A D IRV+D+ +SQLID
Sbjct: 568 SVILVDTVCHRVARAFETVGNKVNAMTFSSDGKWLLVADNDSYIRVFDVATSQLID 623
>DICTYBASE|DDB_G0277019 [details] [associations]
symbol:wdr36 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0277019
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011045 SUPFAM:SSF50974 GO:GO:0030515
eggNOG:COG2319 GenomeReviews:CM000151_GR EMBL:AAFI02000019
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14554
RefSeq:XP_642832.1 ProteinModelPortal:Q550V0 STRING:Q550V0
EnsemblProtists:DDB0237567 GeneID:8620696 KEGG:ddi:DDB_G0277019
InParanoid:Q550V0 OMA:VSANMEN Uniprot:Q550V0
Length = 1026
Score = 427 (155.4 bits), Expect = 5.6e-39, P = 5.6e-39
Identities = 131/486 (26%), Positives = 218/486 (44%)
Query: 111 TSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEP 170
T VH + + LI E ++W+IK ++ + D I K + +
Sbjct: 146 TEIVHPLGYYNKILIGF-ESGEAQIWNIKTKKLIFTFNLVKDNKNIKDK-----ITSFQQ 199
Query: 171 SPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS-GSNTGHL 229
SPV DII +G S+ +I+HN+ +++++ F Q G V+++SFR+DG V+ S++G +
Sbjct: 200 SPVSDIIAIGFSDGNVIIHNLKLNKTVLSFQQR-GSVSSISFRSDGQKQHVATSSHSGDI 258
Query: 230 TVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI 289
+W+LE + + +K AH T FL EP++ T+ DN++K+W F+ DG LLR
Sbjct: 259 LIWDLEKNKPFHTLK-AHDSECTKVEFLREEPIICTTGNDNSIKMWQFNGVDGVPILLRE 317
Query: 290 REGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAXXXXXXXXXXX 349
R GH PP +F+G+ +N + + D ++R + + T NK L
Sbjct: 318 RTGHLDPPKSSEFFGDEQENSVISISDQSIRYVSIVASTFNKELS--------------- 362
Query: 350 EKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQ 409
K N K + P S FS R + W +IH W ++ + E
Sbjct: 363 -KKNFKKEMTPFSGFSTNFRRNRSWETAVSIHEDSKHAFTWDCSSYSINKKLNIQEPISS 421
Query: 410 AKQSK-PTCVYI-THCGNFVLIGYSSGHVDRFNIQSGAHRGSYGH-----DNQPGHVGGV 462
K S V+ T GN + SG + R I + S NQ G+
Sbjct: 422 TKISTCGNFVFFGTVYGNLLKFNIQSG-IKRAKILPNIQKTSITSIIVEPTNQFIITSGL 480
Query: 463 RGVVS----DNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLA 518
+++ ++L + N+ + + K+ IS H ES + A
Sbjct: 481 DSIINYWDFNDLKYLYSIDINNTNTNNKENQDNNNNDNKKSKIR--ISKMLLHSESGIFA 538
Query: 519 VCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS-MDCTIRVWDIPSSQ 577
V +D + + DIDT ++R + G + FS D RW+I ++ +D +RV DIPS +
Sbjct: 539 VVSNDDKIRLYDIDTRKLVRYFNVK-GNVNSIVFSHDGRWIIASTQVDSVVRVLDIPSGK 597
Query: 578 LIDCFQ 583
+ID F+
Sbjct: 598 MIDWFK 603
>ASPGD|ASPL0000018270 [details] [associations]
symbol:AN8293 species:162425 "Emericella nidulans"
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044732 "mitotic spindle pole body" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001302 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0032040 HOGENOM:HOG000217777
ProteinModelPortal:C8V3R6 EnsemblFungi:CADANIAT00004354 OMA:SSVECVE
Uniprot:C8V3R6
Length = 938
Score = 291 (107.5 bits), Expect = 2.7e-29, Sum P(2) = 2.7e-29
Identities = 79/230 (34%), Positives = 113/230 (49%)
Query: 374 WNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433
W +I H G W + K K K V I+ CG F ++G +
Sbjct: 507 WESIVTGHRGDKYARTWFWGKKKAGRWVFETGDGTDVKS-----VAISQCGTFAVVGSAG 561
Query: 434 GHVDRFNIQSGAHRGSY----------G---HDNQP---GHVGGVRGVVSDNLNQIVISG 477
G + FN+QSG +R SY G + N+ H V G+ D+LN+ V+S
Sbjct: 562 GSIRLFNMQSGQYRRSYPCQKTKYDLGGEVRYSNKQIHTQHTKSVTGLAIDSLNRTVLSC 621
Query: 478 GNDQTVKVWHFKQTGKPPLRSIKLD----NGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
G D VK W F Q+G L +LD I+ R + S ++A DD ++ ++D++T
Sbjct: 622 GLDGKVKFWDF-QSG---LLIKELDWYPMTAITALRYNSMSELVAFSCDDLSIRVVDMET 677
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
I+R+L G GQ+ D FS D RW+I ASMD IRVWD+P+ LID F+
Sbjct: 678 KKIVRELWGCAGQINDFIFSSDGRWIIAASMDSIIRVWDLPTGHLIDLFR 727
Score = 114 (45.2 bits), Expect = 2.7e-29, Sum P(2) = 2.7e-29
Identities = 39/130 (30%), Positives = 66/130 (50%)
Query: 226 TGHLTVWNLE-DRQVENQIKKAHRKVVTGA------H--FLYNEPLLVTSSPDNTLKLWI 276
+G +T+W+L +V ++ AH KV G H FL +P++V++ DN+L+ WI
Sbjct: 310 SGDITLWDLNRGGRVVGVLRNAH-KVSAGDPGSGINHIEFLDGQPVIVSTGKDNSLRTWI 368
Query: 277 FDKADGNG--RLLRIREGHSAPPNYIQFYGNSSDN-------ILSAAGDSTLRIFNTKSE 327
D++ + R L R GHS + F + SD +LSA+ DS+L F+ + +
Sbjct: 369 VDESPFSPIPRPLHSRSGHSDTITTVSFLPSHSDGSETTAKWLLSASKDSSLWGFSLRKD 428
Query: 328 TSNKNLGIAS 337
+ + L S
Sbjct: 429 SQSTELSQGS 438
Score = 101 (40.6 bits), Expect = 6.1e-28, Sum P(2) = 6.1e-28
Identities = 33/104 (31%), Positives = 51/104 (49%)
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGP----VTALSFRTD----G 216
V VL PSP + +I + N I + N+ T +S+ F Q P +T+L+FR D G
Sbjct: 236 VTVLRPSPALSVIAIAYKNGSISIQNVETGQSIFSF-QPQAPRVPAITSLTFRNDDAGAG 294
Query: 217 PPMMVSGSN------TGHLTVWNLE-DRQVENQIKKAHRKVVTG 253
SG+ +G +T+W+L +V ++ AH KV G
Sbjct: 295 EDGQQSGAMATACLASGDITLWDLNRGGRVVGVLRNAH-KVSAG 337
Score = 40 (19.1 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 215 DGPPMMVSGSNTGHLTVWNLED 236
DG P++VS L W +++
Sbjct: 350 DGQPVIVSTGKDNSLRTWIVDE 371
>UNIPROTKB|G4N4W8 [details] [associations]
symbol:MGG_16744 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0000935 "barrier septum"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0005816 "spindle pole
body" evidence=ISS] [GO:0005819 "spindle" evidence=ISS] [GO:0005829
"cytosol" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005634
GO:GO:0005816 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
EMBL:CM001233 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364
GO:GO:0032040 GO:GO:0000935 GO:GO:0005732 RefSeq:XP_003711887.1
ProteinModelPortal:G4N4W8 EnsemblFungi:MGG_16744T0 GeneID:12984240
KEGG:mgr:MGG_16744 Uniprot:G4N4W8
Length = 1042
Score = 212 (79.7 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 50/125 (40%), Positives = 70/125 (56%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFF--RTHQESS 515
H V G+V D++ + VI+ D TVK W F TG L I S R H S+
Sbjct: 624 HKKAVTGIVVDSMLKHVITCSLDGTVKFWDFL-TGAL-LDQIDWAPMTSIIGCRYHSGSN 681
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+LA DD ++ ++D++T IR+ G + D FSPD RW++ AS D T+RVWD+P+
Sbjct: 682 LLAFSCDDNSIRVVDMETKRTIREFWGCQSTINDFCFSPDGRWIVAASQDSTLRVWDLPT 741
Query: 576 SQLID 580
S LID
Sbjct: 742 SHLID 746
Score = 119 (46.9 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 43/154 (27%), Positives = 78/154 (50%)
Query: 181 LSNKKIILHNILTDESLMEFI--QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDR 237
L++K ++ T+++ + I +T G + DG M + + +G +T W+L +
Sbjct: 261 LTDKPVLAVKAGTEDAPVSTITFRTDGKGAGQAQDKDGV-MATATTGSGDITFWDLNKGG 319
Query: 238 QVENQIKKAHR------KVVTGA----HFLYNEPLLVTSSPDNTLKLWIFDKADGNG--R 285
++ + ++ AH + V G FL + +++TS DN+LK WIFD+A + R
Sbjct: 320 RIMSVLRGAHNPPLNDGRTVRGGIGKVEFLPGQHVILTSGLDNSLKSWIFDEAALSPVPR 379
Query: 286 LLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319
+L R GH+AP +QF + D + AG+ L
Sbjct: 380 VLHSRSGHAAPVTCLQFLPSDFDG--AEAGNKWL 411
Score = 106 (42.4 bits), Expect = 9.9e-15, Sum P(3) = 9.9e-15
Identities = 51/209 (24%), Positives = 80/209 (38%)
Query: 374 WNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433
W ++ H K W F+ K + P S + V I+ CG F L+G
Sbjct: 511 WESVITAHRNDPKARTW-FWGRKKAGRWAFPT----GDGSYVSTVAISPCGTFALVGSME 565
Query: 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKV-WHFKQTG 492
G VD +N+QSG HR + P R + L Q N + +++ ++ K T
Sbjct: 566 GGVDMYNLQSGQHRQRFPSKLTPAQA---RQLKVQQLRQ-----ANSELMQLEYNSKSTF 617
Query: 493 KPPL-RSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLS-GHMGQLTDA 550
P R K GI + C D TV D T ++ ++ M +
Sbjct: 618 LPGSGRHKKAVTGIV---VDSMLKHVITCSLDGTVKFWDFLTGALLDQIDWAPMTSIIGC 674
Query: 551 DFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ S L + D +IRV D+ + + I
Sbjct: 675 RYHSGSNLLAFSCDDNSIRVVDMETKRTI 703
Score = 97 (39.2 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 40/142 (28%), Positives = 61/142 (42%)
Query: 18 IFLRHRALGYV-SNHLPVVARFIRRRKETLFVT-CVGKAFHVYGCNH-FKLLSVS-PQHE 73
IF R +G V S +P I R K T +T CVG+ H Y LL V+ PQ
Sbjct: 34 IFSPFRTIGLVNSTRVPFTT--IPRGKTTFQITTCVGRCLHTYDLKRGLNLLFVTRPQTP 91
Query: 74 DDITCLSSDFFHIYTSANNI---------IYAWRRGIDIVGTY--KGHTSPVHLILPFGP 122
+DIT + +Y++ + I+ ++RG + P+H IL FG
Sbjct: 92 EDITATFAHGDQVYSAWGSPRKGAKVAQGIWVFQRGKKVAELELPANLNQPIHQILVFGS 151
Query: 123 HLISVDEESNVKVWDIKAEETY 144
+I ++ ++VW E Y
Sbjct: 152 WIIGC-AQTRIEVWKTGTLEHY 172
Score = 90 (36.7 bits), Expect = 2.6e-23, Sum P(3) = 2.6e-23
Identities = 24/96 (25%), Positives = 50/96 (52%)
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTW--GPVTALSFRTDGPP---- 218
V +EP+P + + + S+ +++ NILTD+ ++ PV+ ++FRTDG
Sbjct: 234 VTCMEPTPALSTMAIAYSSGLLMIQNILTDKPVLAVKAGTEDAPVSTITFRTDGKGAGQA 293
Query: 219 ------MMVSGSNTGHLTVWNL-EDRQVENQIKKAH 247
M + + +G +T W+L + ++ + ++ AH
Sbjct: 294 QDKDGVMATATTGSGDITFWDLNKGGRIMSVLRGAH 329
Score = 51 (23.0 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 247 HRKVVTGAHFLYNEPL--LVTSSPDNTLKLWIF 277
H+K VTG + + L ++T S D T+K W F
Sbjct: 624 HKKAVTG--IVVDSMLKHVITCSLDGTVKFWDF 654
Score = 45 (20.9 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 10/46 (21%), Positives = 21/46 (45%)
Query: 536 IIRKLSGHMGQLTDADFSPD--------SRWLITASMDCTIRVWDI 573
++ SGH +T F P ++WL++ +D ++ W +
Sbjct: 380 VLHSRSGHAAPVTCLQFLPSDFDGAEAGNKWLLSGGLDRSLWGWSL 425
Score = 44 (20.5 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 18/69 (26%), Positives = 27/69 (39%)
Query: 402 LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG 461
LV R + Q+ T HC VL + ++ +Q + DN G+ GG
Sbjct: 975 LVARRDYELMQAWMTVFLRLHCDQVVLDDVLIEALRQWKVQEEKEKERL--DNLVGYCGG 1032
Query: 462 VRGVVSDNL 470
V G + L
Sbjct: 1033 VVGFLRSPL 1041
Score = 42 (19.8 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 7/23 (30%), Positives = 16/23 (69%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGK 493
N+ ++SGG D+++ W ++ G+
Sbjct: 408 NKWLLSGGLDRSLWGWSLRRDGQ 430
Score = 42 (19.8 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 8/34 (23%), Positives = 20/34 (58%)
Query: 538 RKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
R + G +G++ +F P ++T+ +D +++ W
Sbjct: 337 RTVRGGIGKV---EFLPGQHVILTSGLDNSLKSW 367
Score = 41 (19.5 bits), Expect = 2.9e-18, Sum P(3) = 2.9e-18
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG 434
V +W+ K+ L P K TC+ T + + I YSSG
Sbjct: 210 VEIWNVSTGKLIYTILPPS----PKAGAVTCMEPTPALSTMAIAYSSG 253
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 172 (65.6 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 42/117 (35%), Positives = 62/117 (52%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI--KLDNGISFFRTHQES 514
GH VR VV + ++++ S +D TVK+W T PL++ DN + +S
Sbjct: 471 GHNDWVRSVVFSHDSRLIASASDDMTVKIW---DTATVPLQNNLESHDNWVRSVVFSHDS 527
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+LA DD TV I D T ++ L GH ++ FSPDSR L +AS D T+++W
Sbjct: 528 RLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 154 (59.3 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 43/124 (34%), Positives = 61/124 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTH--QES 514
GH VR VV + ++++ SG ND+TV++W TG LR D+ S +S
Sbjct: 345 GHNDSVRSVVFSHDSRLIASGSNDRTVRIWE-TTTGL--LRHTFEDHEDSVMAVSFAHDS 401
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
LA D V I D T ++ L GH + FSPDSR L +AS D T+++W
Sbjct: 402 RRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAA 461
Query: 575 SSQL 578
+ L
Sbjct: 462 TGSL 465
Score = 146 (56.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 41/124 (33%), Positives = 62/124 (50%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGI--SFFRTHQES 514
GH V V ++++ S +D+TVK+WH TG R+++ N S +H +S
Sbjct: 429 GHDDCVNSVSFSPDSRLLASASDDRTVKIWH-AATGSLQ-RTLEGHNDWVRSVVFSH-DS 485
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
++A DD TV I D T + L H + FS DSR L +AS D T+++WD
Sbjct: 486 RLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTA 545
Query: 575 SSQL 578
+ L
Sbjct: 546 TGSL 549
Score = 141 (54.7 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 60/248 (24%), Positives = 104/248 (41%)
Query: 89 SANNIIYAWRRGIDIV-GTYKGHTSPVH-LILPFGPHLI-SVDEESNVKVWDIKAEETYL 145
S + + W + T +GH V ++ L+ S ++ VK+WD
Sbjct: 282 SGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTAT----- 336
Query: 146 ELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWG 205
T + M K N V + S +I G +++ + + T F
Sbjct: 337 ------GTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHED 390
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
V A+SF D + S S+ G++ +W+ ++N + + H V F + LL +
Sbjct: 391 SVMAVSFAHDSR-RLASASDGGNVKIWDTRTGSLQN-VLEGHDDCVNSVSFSPDSRLLAS 448
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
+S D T+K+W A G+ L R EGH+ + F + S I SA+ D T++I++T
Sbjct: 449 ASDDRTVKIW--HAATGS--LQRTLEGHNDWVRSVVF-SHDSRLIASASDDMTVKIWDTA 503
Query: 326 SETSNKNL 333
+ NL
Sbjct: 504 TVPLQNNL 511
Score = 132 (51.5 bits), Expect = 0.00015, P = 0.00015
Identities = 61/266 (22%), Positives = 115/266 (43%)
Query: 72 HEDDITCL--SSDFFHIYTSANN-IIYAWRRGIDIVG-TYKGHTSPVHLILPFGP---HL 124
H D + + S D I + +N+ + W ++ T++ H V + + F L
Sbjct: 346 HNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSV-MAVSFAHDSRRL 404
Query: 125 ISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNK 184
S + NVK+WD + L +D CVN + SP ++ ++
Sbjct: 405 ASASDGGNVKIWDTRTGSLQNVLEGHDD-----------CVNSVSFSPDSRLLASASDDR 453
Query: 185 KIILHNILTD--ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242
+ + + T + +E W V ++ F D ++ S S+ + +W+ ++N
Sbjct: 454 TVKIWHAATGSLQRTLEGHNDW--VRSVVFSHDSR-LIASASDDMTVKIWDTATVPLQNN 510
Query: 243 IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQF 302
++ +H V F ++ LL ++S D T+K+W D A G+ L EGH N + F
Sbjct: 511 LE-SHDNWVRSVVFSHDSRLLASASDDMTVKIW--DTATGS--LENTLEGHDDRVNSVSF 565
Query: 303 YGNSSDNILSAAGDSTLRIFNTKSET 328
+S + SA+ D T++I+ + T
Sbjct: 566 SPDSR-LLASASDDGTVKIWYAATGT 590
Score = 124 (48.7 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 35/118 (29%), Positives = 61/118 (51%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
V ++SF D ++ S S G + +W+ ++N ++ H + V F ++ LL ++
Sbjct: 266 VGSVSFSHDSR-LLASASGDGTVKIWDTATSFLQNTLE-GHNEWVKSVVFSHDSRLLASA 323
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
S D T+K+W D A G L R+ +GH+ + F + S I S + D T+RI+ T
Sbjct: 324 SDDGTVKIW--DTATGT--LQRMLKGHNDSVRSVVF-SHDSRLIASGSNDRTVRIWET 376
Score = 114 (45.2 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 35/121 (28%), Positives = 54/121 (44%)
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ 512
+N H VR VV + ++++ S +D TVK+W TG D+ ++
Sbjct: 509 NNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWD-TATGSLENTLEGHDDRVNSVSFSP 567
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+S +LA DD TV I T T+ G FS S L +A D T+++WD
Sbjct: 568 DSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWD 627
Query: 573 I 573
+
Sbjct: 628 M 628
Score = 92 (37.4 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304
K H + V F ++ LL ++S D T+K+W D A L EGH+ + F
Sbjct: 260 KGHDRAVGSVSFSHDSRLLASASGDGTVKIW--DTA--TSFLQNTLEGHNEWVKSVVF-S 314
Query: 305 NSSDNILSAAGDSTLRIFNTKSETSNKNL 333
+ S + SA+ D T++I++T + T + L
Sbjct: 315 HDSRLLASASDDGTVKIWDTATGTLQRML 343
Score = 37 (18.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 399 DMFLVPERCKQAKQSKPTCVY-ITH 422
DMFL+PE A + +C Y I H
Sbjct: 132 DMFLLPEPDPLAAV-RYSCAYWINH 155
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 138 (53.6 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 53/176 (30%), Positives = 82/176 (46%)
Query: 103 IVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN 162
+VG+ +G+ + V L G ++V +V VWD + E L L G +
Sbjct: 18 LVGSARGNPAFVTLRGERG-RCVAVPACEHVFVWDARKGEKVLILK---------GSKHE 67
Query: 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS 222
SC L PSP + VG + I + ++L+ E+ + F VTAL + G +VS
Sbjct: 68 SC---LRPSPDGLHLAVGYEDGSIRIFSLLSGEASVAFNGHKAAVTALQYDQLGG-RLVS 123
Query: 223 GSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
GS + VW++ + ++K H+ VT FL + LLVTS D +K W D
Sbjct: 124 GSKDTDVIVWDVINESGLYRLK-GHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLD 178
Score = 136 (52.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 45/172 (26%), Positives = 77/172 (44%)
Query: 411 KQSK-PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN 469
K SK +C+ + G + +GY G + F++ SG ++ GH V + D
Sbjct: 62 KGSKHESCLRPSPDGLHLAVGYEDGSIRIFSLLSGEASVAFN-----GHKAAVTALQYDQ 116
Query: 470 LNQIVISGGNDQTVKVWH-FKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNI 528
L ++SG D V VW ++G L+ K + ++ +E ++L D V
Sbjct: 117 LGGRLVSGSKDTDVIVWDVINESGLYRLKGHK--DAVTQVLFLKEKNLLVTSGKDTLVKW 174
Query: 529 IDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLID 580
D+DT + L GH ++ + + LIT + D +RVWDI Q ++
Sbjct: 175 WDLDTQHCFKTLVGHRTEVWGMALVSEEKRLITGTADSELRVWDITYIQELE 226
Score = 129 (50.5 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 48/209 (22%), Positives = 83/209 (39%)
Query: 375 NNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG 434
+NIA + V +W+ +S + + + C+ A C V++G +G
Sbjct: 421 DNIAVLSGAAESVKIWN--RSTLQCIRTMD--CEYA-----LCSLFVPGDRQVIVGTKTG 471
Query: 435 HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF------ 488
+ +++ SG + H G V + + ++GG D+ VK W F
Sbjct: 472 KLQLYDLASGTLMETLN-----AHDGAVWSIALSPDQRGFVTGGADKCVKFWDFELVKDE 526
Query: 489 ----KQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
K+ +R ++LD + R +LAV L D TV + DT L GH
Sbjct: 527 SSIQKRLSMKQVRILQLDEDVLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLSLYGHK 586
Query: 545 GQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ D S D + T S D +++W +
Sbjct: 587 LPVLCMDISYDGALIATGSADRNVKIWGL 615
Score = 89 (36.4 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532
++ +G D+ VK+W G D+ + + + +S + D + D D
Sbjct: 600 LIATGSADRNVKIWGL-DFGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGKDNKIKQWDAD 658
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
I+ L GH ++ SP+ ++++AS D ++R+W+ LI
Sbjct: 659 KFEHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWERTREPLI 705
Score = 78 (32.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 38/186 (20%), Positives = 83/186 (44%)
Query: 94 IYAW--RRGIDIVGTYKG--HTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSF 149
++ W R+G ++ KG H S + P G HL E+ +++++ + + E ++F
Sbjct: 47 VFVWDARKGEKVL-ILKGSKHESCLRPS-PDGLHLAVGYEDGSIRIFSLLSGEA--SVAF 102
Query: 150 DNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTA 209
+ G + + V L+ + + G + +I+ +++ + L VT
Sbjct: 103 N-------GHK--AAVTALQYDQLGGRLVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQ 153
Query: 210 LSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD 269
+ F + ++ SG +T + W+L+ + + HR V G + E L+T + D
Sbjct: 154 VLFLKEKNLLVTSGKDT-LVKWWDLDTQHCFKTLV-GHRTEVWGMALVSEEKRLITGTAD 211
Query: 270 NTLKLW 275
+ L++W
Sbjct: 212 SELRVW 217
Score = 51 (23.0 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 16/60 (26%), Positives = 23/60 (38%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+ +++A D V I +D R L H + F S TA D I+ WD
Sbjct: 597 DGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGKDNKIKQWD 656
Score = 45 (20.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 19/72 (26%), Positives = 33/72 (45%)
Query: 86 IYTSANNIIYAWRRGIDIVGTYK---GHTSPVH--LILPFGPHLISVDEESNVKVWDIKA 140
+ TS + + W +D +K GH + V ++ LI+ +S ++VWDI
Sbjct: 163 LVTSGKDTLVKWW-DLDTQHCFKTLVGHRTEVWGMALVSEEKRLITGTADSELRVWDI-- 219
Query: 141 EETYLELSFDND 152
TY++ D D
Sbjct: 220 --TYIQELEDPD 229
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 137 (53.3 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 47/209 (22%), Positives = 87/209 (41%)
Query: 375 NNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG 434
+NIA + + + +W+ +S + + +P C+ A C + V+IG +G
Sbjct: 425 DNIAVLSAAADSIKIWN--RSTLQCIRTMP--CEYA-----LCSFFVPGDRQVVIGTKTG 475
Query: 435 HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF------ 488
++ +++ SG + H G + + + ++GG D+ VK W F
Sbjct: 476 NLQLYDLASGTLLETIA-----AHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDK 530
Query: 489 ----KQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
K+ R+++LD + +LAV L D TV + +DT L GH
Sbjct: 531 NSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKVFYVDTLKFFLSLYGHK 590
Query: 545 GQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ D S D + T S D +++W +
Sbjct: 591 LPVLCMDISHDGALIATGSADRNVKIWGL 619
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 43/173 (24%), Positives = 74/173 (42%)
Query: 409 QAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSD 468
Q + + TC+ + G + +GY G + F++ SG G+ GH V + D
Sbjct: 62 QGNKQEVTCLCPSPDGLHLAVGYEDGAIRIFSLLSGE-----GNITFNGHKAAVTSLKYD 116
Query: 469 NLNQIVISGGNDQTVKVWH-FKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVN 527
L + SG D V +W ++G L+ K + ++ +E ++L D V
Sbjct: 117 QLGGRLASGSKDTDVIIWDVINESGLYRLKGHK--DAVTQALFLRERNLLVTSGKDTMVK 174
Query: 528 IIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLID 580
D+D + + GH ++ + + LIT + D +R WDI Q ID
Sbjct: 175 WWDLDNQHCFKTMVGHRTEVWGLVLVSEEKRLITGAADSELRAWDIDYLQEID 227
Score = 128 (50.1 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 57/221 (25%), Positives = 95/221 (42%)
Query: 103 IVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN 162
++G+ KG+ V L G + ++V +V +WD++ E L L G +
Sbjct: 18 LIGSQKGNIVFVTLRGEKGRY-VAVPACEHVFIWDLRKGEKILILQ---------GNKQE 67
Query: 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS 222
V L PSP + VG + I + ++L+ E + F VT+L + G + S
Sbjct: 68 --VTCLCPSPDGLHLAVGYEDGAIRIFSLLSGEGNITFNGHKAAVTSLKYDQLGG-RLAS 124
Query: 223 GSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG 282
GS + +W++ + ++K H+ VT A FL LLVTS D +K W D
Sbjct: 125 GSKDTDVIIWDVINESGLYRLK-GHKDAVTQALFLRERNLLVTSGKDTMVKWWDLD---- 179
Query: 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
N + GH + +++ A DS LR ++
Sbjct: 180 NQHCFKTMVGHRTEVWGLVLVSEEK-RLITGAADSELRAWD 219
Score = 94 (38.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 25/107 (23%), Positives = 47/107 (43%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532
++ +G D+ VK+W G D+ + + R +S + D + D D
Sbjct: 604 LIATGSADRNVKIWGL-DFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWDAD 662
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
I+ L GH ++ SP ++++AS D ++R+W+ LI
Sbjct: 663 KFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWERTREPLI 709
Score = 86 (35.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 53/238 (22%), Positives = 97/238 (40%)
Query: 94 IYAW--RRGIDIVGTYKGHTSPVHLILPF--GPHLISVDEESNVKVWDIKAEETYLELSF 149
++ W R+G I+ +G+ V + P G HL E+ ++++ + + E
Sbjct: 47 VFIWDLRKGEKIL-ILQGNKQEVTCLCPSPDGLHLAVGYEDGAIRIFSLLSGE------- 98
Query: 150 DNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTA 209
N TF G + + V L+ + + G + +I+ +++ + L VT
Sbjct: 99 GNITFN--GHK--AAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQ 154
Query: 210 LSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD 269
F + ++ SG +T + W+L+++ + HR V G + E L+T + D
Sbjct: 155 ALFLRERNLLVTSGKDT-MVKWWDLDNQHCFKTMV-GHRTEVWGLVLVSEEKRLITGAAD 212
Query: 270 NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
+ L+ W D L I + P I+ D S DSTL + KSE
Sbjct: 213 SELRAWDIDY------LQEIDDPEEPEPKKIKECPGIQDTPESE--DSTLEADDEKSE 262
Score = 57 (25.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 17/60 (28%), Positives = 24/60 (40%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+ +++A D V I +D R L H + F P S TA D I+ WD
Sbjct: 601 DGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWD 660
Score = 53 (23.7 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 540 LSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ GH + FS D+ +++A+ D +I++W+ + Q I
Sbjct: 410 IGGHRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCI 448
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 192 (72.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 94/395 (23%), Positives = 162/395 (41%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264
GPV ++ F DG +VSGS + +W+ ++ Q H V F + LL
Sbjct: 751 GPVESVVFSPDGK-QLVSGSYDDTVKIWDPATGELL-QTLDGHSGTVESLAFSPDGKLLA 808
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
+ S DNT+ LW D A G LL+ EGH + F + + + SA+ DST++I++
Sbjct: 809 SGSYDNTIDLW--DSA--TGELLQTFEGHPHSIWSVAFAPDGKE-LASASDDSTIKIWDL 863
Query: 325 KSETSNKNL-----GIASAXXXXXXXXXXXEKMNE--KFILPPVSQFSFGLAREKDW-NN 376
+ + L + S ++ K P + L W +
Sbjct: 864 ATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKS 923
Query: 377 IAAIHTGK--------NKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVL 428
+A GK N V LW+ ++ E Q+ +S V + G +
Sbjct: 924 VAFSPDGKKLASGSEKNTVKLWN---PATGELLQTLEGHSQSVRS----VAFSPDGKQLA 976
Query: 429 IGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW-- 486
S + +N +G + ++ GH +R V + ++SG +D T+K+W
Sbjct: 977 SSSSDTTIKLWNSTTGELQQTF-----KGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDL 1031
Query: 487 ---HFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGH 543
+Q+ + RS+ + ++F + LA D T+ + D T + R L GH
Sbjct: 1032 ATSELQQSLEDHSRSV---HAVAF---SPDDKQLASSSLDSTIKLWDSATGELQRTLEGH 1085
Query: 544 MGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ FSPD + L + S D TI++W+ + +L
Sbjct: 1086 SQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGEL 1120
Score = 145 (56.1 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
Identities = 36/122 (29%), Positives = 64/122 (52%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSM 516
H+G V VV + ++SG D TVK+W TG+ L+++ +G + + +
Sbjct: 749 HLGPVESVVFSPDGKQLVSGSYDDTVKIWD-PATGEL-LQTLDGHSGTVESLAFSPDGKL 806
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA D T+++ D T +++ GH + F+PD + L +AS D TI++WD+ +
Sbjct: 807 LASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATG 866
Query: 577 QL 578
+L
Sbjct: 867 EL 868
Score = 139 (54.0 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH GVR V +++ S D T+K+W+ TG+ + + +
Sbjct: 1084 GHSQGVRSVTFSPDGKLLASNSYDGTIKLWN-PLTGELQQTLTGRSDWVDSVAFSPDGKQ 1142
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA D T+ + D T +++ L GH ++ FSPD + L + S D T ++WD +
Sbjct: 1143 LASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATG 1202
Query: 577 QLIDCFQ 583
+L+ F+
Sbjct: 1203 ELLQIFE 1209
Score = 128 (50.1 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 46/190 (24%), Positives = 82/190 (43%)
Query: 89 SANNIIYAWRRGI-DIVGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYL 145
S +N I W +++ T++GH + + P G L S ++S +K+WD+ E L
Sbjct: 811 SYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGE--L 868
Query: 146 ELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWG 205
+ + D+ + + + SP ++ + I + N T E G
Sbjct: 869 QQTLDSHSQSVRSVAF---------SPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSG 919
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
V +++F DG + SGS + +WN ++ Q + H + V F + L +
Sbjct: 920 WVKSVAFSPDGKKL-ASGSEKNTVKLWNPATGELL-QTLEGHSQSVRSVAFSPDGKQLAS 977
Query: 266 SSPDNTLKLW 275
SS D T+KLW
Sbjct: 978 SSSDTTIKLW 987
Score = 124 (48.7 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 45/172 (26%), Positives = 75/172 (43%)
Query: 106 TYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS 163
T + H PV ++ P G L+S + VK+WD E L + T
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGT---------- 794
Query: 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG 223
V L SP ++ G + I L + T E L F + +++F DG + S
Sbjct: 795 -VESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKEL-ASA 852
Query: 224 SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
S+ + +W+L +++ Q +H + V F + LL +SS D+T+K+W
Sbjct: 853 SDDSTIKIWDLATGELQ-QTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVW 903
Score = 120 (47.3 bits), Expect = 5.6e-07, Sum P(3) = 5.6e-07
Identities = 34/127 (26%), Positives = 62/127 (48%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSM 516
H VR V +++ S D T+KVW+ TG+ +S++ +G + +
Sbjct: 875 HSQSVRSVAFSPDGKLLASSSLDSTIKVWN-PATGELQ-QSLEGRSGWVKSVAFSPDGKK 932
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA + TV + + T +++ L GH + FSPD + L ++S D TI++W+ +
Sbjct: 933 LASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTG 992
Query: 577 QLIDCFQ 583
+L F+
Sbjct: 993 ELQQTFK 999
Score = 107 (42.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 47/199 (23%), Positives = 87/199 (43%)
Query: 88 TSANNIIYAWRRGI-DIVGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETY 144
+S++ I W ++ T+KGH + + P G HL+S +++ +K+WD+ E
Sbjct: 978 SSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSE-- 1035
Query: 145 LELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTW 204
L+ S ++ + V+ + SP + + I L + T E L ++
Sbjct: 1036 LQQSLEDHS---------RSVHAVAFSPDDKQLASSSLDSTIKLWDSATGE-LQRTLEGH 1085
Query: 205 GP-VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLL 263
V +++F DG ++ S S G + +WN +++ Q V F + L
Sbjct: 1086 SQGVRSVTFSPDGK-LLASNSYDGTIKLWNPLTGELQ-QTLTGRSDWVDSVAFSPDGKQL 1143
Query: 264 VTSSPDNTLKLWIFDKADG 282
+ D+T+KLW D A G
Sbjct: 1144 ASGYYDSTIKLW--DSATG 1160
Score = 105 (42.0 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 47/192 (24%), Positives = 84/192 (43%)
Query: 89 SANNIIYAWRRGI-DIVGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYL 145
S N + W +++ T +GH+ V + P G L S ++ +K+W+ T
Sbjct: 937 SEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWN----STTG 992
Query: 146 ELSFDNDTFKIMGKR-WNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTW 204
EL TFK G W + + SP + G + I L ++ T E L + ++
Sbjct: 993 ELQ---QTFK--GHDLW---IRAVAFSPDGKHLVSGSDDNTIKLWDLATSE-LQQSLEDH 1043
Query: 205 G-PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLL 263
V A++F D + S S + +W+ +++ ++ H + V F + LL
Sbjct: 1044 SRSVHAVAFSPDDK-QLASSSLDSTIKLWDSATGELQRTLE-GHSQGVRSVTFSPDGKLL 1101
Query: 264 VTSSPDNTLKLW 275
++S D T+KLW
Sbjct: 1102 ASNSYDGTIKLW 1113
Score = 94 (38.1 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 29/105 (27%), Positives = 52/105 (49%)
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTC 534
SG D T+K+W TG+ L++++ + I + +LA D T + D T
Sbjct: 1145 SGYYDSTIKLWD-SATGEL-LQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATG 1202
Query: 535 TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+++ GH + FSPD + L ++S TI++WD + +L+
Sbjct: 1203 ELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELL 1247
Score = 84 (34.6 bits), Expect = 5.4e-09, Sum P(3) = 5.4e-09
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 232 WNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE 291
W+ E + +EN H V F + LV+ S D+T+K+W D A G LL+ +
Sbjct: 739 WSAEQQTLEN-----HLGPVESVVFSPDGKQLVSGSYDDTVKIW--DPA--TGELLQTLD 789
Query: 292 GHSAPPNYIQFYGNSSDNILSAAG--DSTLRIFNT 324
GHS + F S D L A+G D+T+ ++++
Sbjct: 790 GHSGTVESLAF---SPDGKLLASGSYDNTIDLWDS 821
Score = 53 (23.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 22/88 (25%), Positives = 38/88 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESS 515
GH V V +++ S +T+K+W TG+ L+++ D + +
Sbjct: 1210 GHSKWVESVAFSPDGKLLASSSYGETIKLWD-PVTGEL-LQTLNDPDESAGSVAFSPDGN 1267
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGH 543
LA +D F I D T +++ L GH
Sbjct: 1268 RLA-SVDIFDTKIWDPATGELLQALKGH 1294
Score = 45 (20.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 102 DIVGTYKGHTSPVHLILPFGPHLISVDE-ESNVKVWDIKAEETYLELSFDN 151
D +G K +TS L H+ D E N + D+K E + SF+N
Sbjct: 119 DAIGQLKRYTSLFVAALQID-HVGFTDPVEQNFDLHDLKIVEEAIHDSFEN 168
Score = 45 (20.9 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 264 VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
+ D+ L +++D R + H A +Q Y SS + S G T RIFN
Sbjct: 671 IQDDKDSELSKFLYD-----ARRFVLNNRHLAETAPLQLY--SSGLMFSPEGSITRRIFN 723
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 137 (53.3 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 49/209 (23%), Positives = 87/209 (41%)
Query: 375 NNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG 434
+NIA + V +W+ +S + + +P C+ A C + V+IG +G
Sbjct: 425 DNIAVLSAAAESVKIWN--RSTLQCIRTMP--CEYA-----LCSFFVPGDRQVVIGTKTG 475
Query: 435 HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF------ 488
++ +++ SG + H G + + + ++GG D+ VK W F
Sbjct: 476 NMQLYDLASGNLLETIA-----AHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDK 530
Query: 489 ----KQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
K+ R ++LD + + + +LAV L D TV I +DT L GH
Sbjct: 531 NSTQKRLSVKQTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLSLYGHK 590
Query: 545 GQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ D S D + T S D +++W +
Sbjct: 591 LPVICMDISHDGALIATGSADRNVKIWGL 619
Score = 126 (49.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 57/221 (25%), Positives = 96/221 (43%)
Query: 103 IVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN 162
++G+ KG+ V L G + ++V +V +WD++ E L L G +
Sbjct: 18 LIGSQKGNIVFVTLRGEKGRY-VAVPACEHVFIWDLRKGEKILILQ---------GLKQE 67
Query: 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS 222
V L PSP + VG + I + ++L+ E + F VT+L + G + S
Sbjct: 68 --VTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRAAVTSLKYDQLGG-RLAS 124
Query: 223 GSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG 282
GS + +W++ + ++K H+ VT A FL LLVTS D +K W D
Sbjct: 125 GSKDTDVIIWDVINESGLYRLK-GHKDAVTQALFLRERNLLVTSGKDTMVKWWDLD---- 179
Query: 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
N + GH + + +++ A DS LR ++
Sbjct: 180 NQHCFKTMVGHRTEVWGLVLVSEET-RLITGAADSELRAWD 219
Score = 124 (48.7 bits), Expect = 0.00048, P = 0.00048
Identities = 43/173 (24%), Positives = 73/173 (42%)
Query: 409 QAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSD 468
Q + + TC+ + G + +GY G + F++ SG G+ GH V + D
Sbjct: 62 QGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGE-----GNITFNGHRAAVTSLKYD 116
Query: 469 NLNQIVISGGNDQTVKVWH-FKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVN 527
L + SG D V +W ++G L+ K + ++ +E ++L D V
Sbjct: 117 QLGGRLASGSKDTDVIIWDVINESGLYRLKGHK--DAVTQALFLRERNLLVTSGKDTMVK 174
Query: 528 IIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLID 580
D+D + + GH ++ + LIT + D +R WDI Q ID
Sbjct: 175 WWDLDNQHCFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWDIAYLQEID 227
Score = 90 (36.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 25/107 (23%), Positives = 46/107 (42%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532
++ +G D+ VK+W G D+ + R +S + D + D D
Sbjct: 604 LIATGSADRNVKIWGL-DFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQWDAD 662
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
I+ L GH ++ SP ++++AS D ++R+W+ LI
Sbjct: 663 KFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWERTREPLI 709
Score = 59 (25.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 17/60 (28%), Positives = 24/60 (40%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+ +++A D V I +D R L H + F P S TA D I+ WD
Sbjct: 601 DGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQWD 660
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 135 (52.6 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 36/130 (27%), Positives = 64/130 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK--LDN--GISFFRTHQ 512
GH V V+ + +++S D T+KVW + +TG R++K D+ ISF H
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF--DHS 161
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+LA C D T+ + D IR + GH ++ P+ +++A+ D TI++W+
Sbjct: 162 -GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWE 220
Query: 573 IPSSQLIDCF 582
+ + + F
Sbjct: 221 VQTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG D+T+K+W TG + + DN + H + C DD T+ + D
Sbjct: 311 LLSGSRDKTIKMWDVS-TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ L+ H +T DF + +++T S+D T++VW+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 119 (46.9 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
PVT + F +MVS S + VW+ E E +K H V F ++ LL +
Sbjct: 110 PVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLAS 167
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
S D T+KLW F + +R GH + + N D+I+SAA D T++++ +
Sbjct: 168 CSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNG-DHIVSAARDKTIKMWEVQ 222
Query: 326 S 326
+
Sbjct: 223 T 223
Score = 83 (34.3 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
R +GHD+ +V V + N + IV S D+T+K+W QTG +
Sbjct: 186 RTMHGHDH---NVSSV--AIMPNGDHIV-SAARDKTIKMWEV-QTGYCVKTFTGHREWVR 238
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558
R +Q+ +++A C +D TV + + T +L H + ++P+S +
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 75 (31.5 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E HR VT F ++V++S D T+K+W ++ D R L+ GH+
Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDS 152
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFN 323
I F +S + S + D T+++++
Sbjct: 153 VQDISF-DHSGKLLASCSADMTIKLWD 178
Score = 71 (30.1 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 424 GNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482
G F+L G + +++ +G + GHDN VRGV+ + + ++S +D+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW------VRGVLFHSGGKFILSCADDKT 361
Query: 483 VKVWHFK 489
++VW +K
Sbjct: 362 LRVWDYK 368
Score = 65 (27.9 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDT-----FKIMGKRW 161
GH SPV ++ P ++S E++ +KVWD + + L D+ F GK
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 162 NSC 164
SC
Sbjct: 166 ASC 168
Score = 47 (21.6 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 558 WLITASMDCTIRVWDIPSSQLI 579
+L++ S D TI++WD+ + +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL 331
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK--LDN--GISFFRTHQ 512
GH V V+ + +++S D T+KVW + +TG R++K D+ ISF H
Sbjct: 41 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF--DHS 96
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+LA C D T+ + D IR + GH ++ P+ +++AS D TI++W+
Sbjct: 97 -GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 155
Query: 573 IPSSQLIDCF 582
+ + + F
Sbjct: 156 VQTGYCVKTF 165
Score = 133 (51.9 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG D+T+K+W TG + + DN + H + C DD T+ + D
Sbjct: 246 LLSGSRDKTIKMWDVS-TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 304
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ L+ H +T DF + +++T S+D T++VW+
Sbjct: 305 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 116 (45.9 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
PVT + F +MVS S + VW+ E E +K H V F ++ LL +
Sbjct: 45 PVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLAS 102
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
S D T+KLW F + +R GH + + N D+I+SA+ D T++++ +
Sbjct: 103 CSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 157
Query: 326 S 326
+
Sbjct: 158 T 158
Score = 83 (34.3 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
R +GHD+ +V V + N + IV S D+T+K+W QTG +
Sbjct: 121 RTMHGHDH---NVSSV--AIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVR 173
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558
R +Q+ +++A C +D TV + + T +L H + ++P+S +
Sbjct: 174 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 225
Score = 75 (31.5 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E HR VT F ++V++S D T+K+W ++ D R L+ GH+
Sbjct: 32 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDS 87
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFN 323
I F +S + S + D T+++++
Sbjct: 88 VQDISF-DHSGKLLASCSADMTIKLWD 113
Score = 71 (30.1 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 424 GNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482
G F+L G + +++ +G + GHDN VRGV+ + + ++S +D+T
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW------VRGVLFHSGGKFILSCADDKT 296
Query: 483 VKVWHFK 489
++VW +K
Sbjct: 297 LRVWDYK 303
Score = 65 (27.9 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDT-----FKIMGKRW 161
GH SPV ++ P ++S E++ +KVWD + + L D+ F GK
Sbjct: 41 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 100
Query: 162 NSC 164
SC
Sbjct: 101 ASC 103
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 558 WLITASMDCTIRVWDIPSSQLI 579
+L++ S D TI++WD+ + +
Sbjct: 245 FLLSGSRDKTIKMWDVSTGMCL 266
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 140 (54.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK--LDN--GISFFRTHQ 512
GH V V+ + +++S D T+KVW + +TG R++K D+ ISF T
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISFDHT-- 161
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+LA C D T+ + D IR + GH ++ P+ +++AS D TI++W+
Sbjct: 162 -GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 573 IPSSQLIDCF 582
+ + + F
Sbjct: 221 VQTGYCVKTF 230
Score = 135 (52.6 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG D+T+K+W TG + + DN + H + C DD T+ + D
Sbjct: 311 LLSGSRDKTIKMWDIS-TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKN 369
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ L+ H +T DF + +++T S+D T++VW+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 118 (46.6 bits), Expect = 0.00069, P = 0.00069
Identities = 53/271 (19%), Positives = 110/271 (40%)
Query: 72 HEDDITCLSSDF---FHIYTSANNIIYAWR-RGIDIVGTYKGHTSPVH--LILPFGPHLI 125
H D + +S D SA+ I W +G + + T GH V I+P G H++
Sbjct: 149 HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 208
Query: 126 SVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKK 185
S + +K+W+++ Y +F + R N ++ + V + K
Sbjct: 209 SASRDKTIKMWEVQTG--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 186 IILHNILTDESLMEFIQTWGPVTALSFRTDG----------P-PMMVSGSNTGHLTVWNL 234
+ E ++E I +W P ++ S ++ P P ++SGS + +W++
Sbjct: 267 ECKAELREHEHVVECI-SWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDI 325
Query: 235 EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS 294
+ H V G F +++ + D TL++W F N R ++ H
Sbjct: 326 STGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDFK----NKRCMKTLNAHE 380
Query: 295 APPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
+ F+ ++ +++ + D T++++ +
Sbjct: 381 HFVTSLDFH-KTAPYVVTGSVDQTVKVWECR 410
Score = 115 (45.5 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 35/121 (28%), Positives = 56/121 (46%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
PVT + F +MVS S + VW+ E E +K H V F + LL +
Sbjct: 110 PVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHTGKLLAS 167
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
S D T+KLW F + +R GH + + N D+I+SA+ D T++++ +
Sbjct: 168 CSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 326 S 326
+
Sbjct: 223 T 223
Score = 83 (34.3 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
R +GHD+ +V V + N + IV S D+T+K+W QTG +
Sbjct: 186 RTMHGHDH---NVSSV--AIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVR 238
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558
R +Q+ +++A C +D TV + + T +L H + ++P+S +
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 75 (31.5 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 424 GNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482
G F+L G + ++I +G + GHDN VRGV+ + + ++S +D+T
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNW------VRGVLFHSGGKFILSCADDKT 361
Query: 483 VKVWHFK 489
++VW FK
Sbjct: 362 LRVWDFK 368
Score = 72 (30.4 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 23/87 (26%), Positives = 42/87 (48%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E HR VT F ++V++S D T+K+W ++ D R L+ GH+
Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDS 152
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFN 323
I F ++ + S + D T+++++
Sbjct: 153 VQDISF-DHTGKLLASCSADMTIKLWD 178
Score = 71 (30.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 523 DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577
D T+ + DI T + L GH + F +++++ + D T+RVWD + +
Sbjct: 317 DKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKR 371
Score = 65 (27.9 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDT-----FKIMGKRW 161
GH SPV ++ P ++S E++ +KVWD + + L D+ F GK
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLL 165
Query: 162 NSC 164
SC
Sbjct: 166 ASC 168
Score = 48 (22.0 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 558 WLITASMDCTIRVWDIPSSQLI 579
+L++ S D TI++WDI + +
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCL 331
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK--LDN--GISFFRTHQ 512
GH V V+ + +++S D T+KVW + +TG R++K D+ ISF H
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVEDISF--DHS 161
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+LA C D T+ + D IR + GH ++ P+ +++AS D TI++W+
Sbjct: 162 -GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 573 IPSSQLIDCF 582
+ + + F
Sbjct: 221 VQTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG D+T+K+W TG + + DN + H + C DD T+ + D
Sbjct: 311 LLSGSRDKTIKMWDVS-TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ L+ H +T DF + +++T S+D T++VW+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 116 (45.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
PVT + F +MVS S + VW+ E E +K H V F ++ LL +
Sbjct: 110 PVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVEDISFDHSGKLLAS 167
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
S D T+KLW F + +R GH + + N D+I+SA+ D T++++ +
Sbjct: 168 CSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 326 S 326
+
Sbjct: 223 T 223
Score = 83 (34.3 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
R +GHD+ +V V + N + IV S D+T+K+W QTG +
Sbjct: 186 RTMHGHDH---NVSSV--AIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVR 238
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558
R +Q+ +++A C +D TV + + T +L H + ++P+S +
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 75 (31.5 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E HR VT F ++V++S D T+K+W ++ D R L+ GH+
Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDS 152
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFN 323
I F +S + S + D T+++++
Sbjct: 153 VEDISF-DHSGKLLASCSADMTIKLWD 178
Score = 71 (30.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 424 GNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482
G F+L G + +++ +G + GHDN VRGV+ + + ++S +D+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW------VRGVLFHSGGKFILSCADDKT 361
Query: 483 VKVWHFK 489
++VW +K
Sbjct: 362 LRVWDYK 368
Score = 66 (28.3 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLEL-----SFDNDTFKIMGKRW 161
GH SPV ++ P ++S E++ +KVWD + + L S ++ +F GK
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLL 165
Query: 162 NSC 164
SC
Sbjct: 166 ASC 168
Score = 47 (21.6 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 558 WLITASMDCTIRVWDIPSSQLI 579
+L++ S D TI++WD+ + +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL 331
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK--LDN--GISFFRTHQ 512
GH V V+ + +++S D T+KVW + +TG R++K D+ ISF H
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF--DHS 161
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+LA C D T+ + D IR + GH ++ P+ +++AS D TI++W+
Sbjct: 162 -GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 573 IPSSQLIDCF 582
+ + + F
Sbjct: 221 VQTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG D+T+K+W TG + + DN + H + C DD T+ + D
Sbjct: 311 LLSGSRDKTIKMWDVS-TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ L+ H +T DF + +++T S+D T++VW+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 116 (45.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
PVT + F +MVS S + VW+ E E +K H V F ++ LL +
Sbjct: 110 PVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLAS 167
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
S D T+KLW F + +R GH + + N D+I+SA+ D T++++ +
Sbjct: 168 CSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 326 S 326
+
Sbjct: 223 T 223
Score = 83 (34.3 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
R +GHD+ +V V + N + IV S D+T+K+W QTG +
Sbjct: 186 RTMHGHDH---NVSSV--AIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVR 238
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558
R +Q+ +++A C +D TV + + T +L H + ++P+S +
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 75 (31.5 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E HR VT F ++V++S D T+K+W ++ D R L+ GH+
Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDS 152
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFN 323
I F +S + S + D T+++++
Sbjct: 153 VQDISF-DHSGKLLASCSADMTIKLWD 178
Score = 71 (30.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 424 GNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482
G F+L G + +++ +G + GHDN VRGV+ + + ++S +D+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW------VRGVLFHSGGKFILSCADDKT 361
Query: 483 VKVWHFK 489
++VW +K
Sbjct: 362 LRVWDYK 368
Score = 65 (27.9 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDT-----FKIMGKRW 161
GH SPV ++ P ++S E++ +KVWD + + L D+ F GK
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 162 NSC 164
SC
Sbjct: 166 ASC 168
Score = 47 (21.6 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 558 WLITASMDCTIRVWDIPSSQLI 579
+L++ S D TI++WD+ + +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL 331
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK--LDN--GISFFRTHQ 512
GH V V+ + +++S D T+KVW + +TG R++K D+ ISF H
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF--DHS 161
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+LA C D T+ + D IR + GH ++ P+ +++AS D TI++W+
Sbjct: 162 -GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 573 IPSSQLIDCF 582
+ + + F
Sbjct: 221 VQTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG D+T+K+W TG + + DN + H + C DD T+ + D
Sbjct: 311 LLSGSRDKTIKMWDVS-TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ L+ H +T DF + +++T S+D T++VW+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 116 (45.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
PVT + F +MVS S + VW+ E E +K H V F ++ LL +
Sbjct: 110 PVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLAS 167
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
S D T+KLW F + +R GH + + N D+I+SA+ D T++++ +
Sbjct: 168 CSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 326 S 326
+
Sbjct: 223 T 223
Score = 83 (34.3 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
R +GHD+ +V V + N + IV S D+T+K+W QTG +
Sbjct: 186 RTMHGHDH---NVSSV--AIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVR 238
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558
R +Q+ +++A C +D TV + + T +L H + ++P+S +
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 75 (31.5 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E HR VT F ++V++S D T+K+W ++ D R L+ GH+
Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDS 152
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFN 323
I F +S + S + D T+++++
Sbjct: 153 VQDISF-DHSGKLLASCSADMTIKLWD 178
Score = 71 (30.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 424 GNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482
G F+L G + +++ +G + GHDN VRGV+ + + ++S +D+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW------VRGVLFHSGGKFILSCADDKT 361
Query: 483 VKVWHFK 489
++VW +K
Sbjct: 362 LRVWDYK 368
Score = 65 (27.9 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDT-----FKIMGKRW 161
GH SPV ++ P ++S E++ +KVWD + + L D+ F GK
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 162 NSC 164
SC
Sbjct: 166 ASC 168
Score = 47 (21.6 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 558 WLITASMDCTIRVWDIPSSQLI 579
+L++ S D TI++WD+ + +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL 331
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK--LDN--GISFFRTHQ 512
GH V V+ + +++S D T+KVW + +TG R++K D+ ISF H
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF--DHS 161
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+LA C D T+ + D IR + GH ++ P+ +++AS D TI++W+
Sbjct: 162 -GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 573 IPSSQLIDCF 582
+ + + F
Sbjct: 221 VQTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG D+T+K+W TG + + DN + H + C DD T+ + D
Sbjct: 311 LLSGSRDKTIKMWDVS-TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ L+ H +T DF + +++T S+D T++VW+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 116 (45.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
PVT + F +MVS S + VW+ E E +K H V F ++ LL +
Sbjct: 110 PVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLAS 167
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
S D T+KLW F + +R GH + + N D+I+SA+ D T++++ +
Sbjct: 168 CSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 326 S 326
+
Sbjct: 223 T 223
Score = 83 (34.3 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
R +GHD+ +V V + N + IV S D+T+K+W QTG +
Sbjct: 186 RTMHGHDH---NVSSV--AIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVR 238
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558
R +Q+ +++A C +D TV + + T +L H + ++P+S +
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 75 (31.5 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E HR VT F ++V++S D T+K+W ++ D R L+ GH+
Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDS 152
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFN 323
I F +S + S + D T+++++
Sbjct: 153 VQDISF-DHSGKLLASCSADMTIKLWD 178
Score = 71 (30.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 424 GNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482
G F+L G + +++ +G + GHDN VRGV+ + + ++S +D+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW------VRGVLFHSGGKFILSCADDKT 361
Query: 483 VKVWHFK 489
++VW +K
Sbjct: 362 LRVWDYK 368
Score = 65 (27.9 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDT-----FKIMGKRW 161
GH SPV ++ P ++S E++ +KVWD + + L D+ F GK
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 162 NSC 164
SC
Sbjct: 166 ASC 168
Score = 47 (21.6 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 558 WLITASMDCTIRVWDIPSSQLI 579
+L++ S D TI++WD+ + +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL 331
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK--LDN--GISFFRTHQ 512
GH V V+ + +++S D T+KVW + +TG R++K D+ ISF H
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF--DHS 161
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+LA C D T+ + D IR + GH ++ P+ +++AS D TI++W+
Sbjct: 162 -GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 573 IPSSQLIDCF 582
+ + + F
Sbjct: 221 VQTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG D+T+K+W TG + + DN + H + C DD T+ + D
Sbjct: 311 LLSGSRDKTIKMWDVS-TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ L+ H +T DF + +++T S+D T++VW+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 116 (45.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
PVT + F +MVS S + VW+ E E +K H V F ++ LL +
Sbjct: 110 PVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLAS 167
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
S D T+KLW F + +R GH + + N D+I+SA+ D T++++ +
Sbjct: 168 CSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 326 S 326
+
Sbjct: 223 T 223
Score = 83 (34.3 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
R +GHD+ +V V + N + IV S D+T+K+W QTG +
Sbjct: 186 RTMHGHDH---NVSSV--AIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVR 238
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558
R +Q+ +++A C +D TV + + T +L H + ++P+S +
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 75 (31.5 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E HR VT F ++V++S D T+K+W ++ D R L+ GH+
Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDS 152
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFN 323
I F +S + S + D T+++++
Sbjct: 153 VQDISF-DHSGKLLASCSADMTIKLWD 178
Score = 71 (30.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 424 GNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482
G F+L G + +++ +G + GHDN VRGV+ + + ++S +D+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW------VRGVLFHSGGKFILSCADDKT 361
Query: 483 VKVWHFK 489
++VW +K
Sbjct: 362 LRVWDYK 368
Score = 65 (27.9 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDT-----FKIMGKRW 161
GH SPV ++ P ++S E++ +KVWD + + L D+ F GK
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 162 NSC 164
SC
Sbjct: 166 ASC 168
Score = 47 (21.6 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 558 WLITASMDCTIRVWDIPSSQLI 579
+L++ S D TI++WD+ + +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL 331
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK--LDN--GISFFRTHQ 512
GH V V+ + +++S D T+KVW + +TG R++K D+ ISF H
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF--DHS 161
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+LA C D T+ + D IR + GH ++ P+ +++AS D TI++W+
Sbjct: 162 -GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 573 IPSSQLIDCF 582
+ + + F
Sbjct: 221 VQTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG D+T+K+W TG + + DN + H + C DD T+ + D
Sbjct: 311 LLSGSRDKTIKMWDVS-TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ L+ H +T DF + +++T S+D T++VW+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 116 (45.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
PVT + F +MVS S + VW+ E E +K H V F ++ LL +
Sbjct: 110 PVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLAS 167
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
S D T+KLW F + +R GH + + N D+I+SA+ D T++++ +
Sbjct: 168 CSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 326 S 326
+
Sbjct: 223 T 223
Score = 83 (34.3 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
R +GHD+ +V V + N + IV S D+T+K+W QTG +
Sbjct: 186 RTMHGHDH---NVSSV--AIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVR 238
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558
R +Q+ +++A C +D TV + + T +L H + ++P+S +
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 75 (31.5 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E HR VT F ++V++S D T+K+W ++ D R L+ GH+
Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDS 152
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFN 323
I F +S + S + D T+++++
Sbjct: 153 VQDISF-DHSGKLLASCSADMTIKLWD 178
Score = 71 (30.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 424 GNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482
G F+L G + +++ +G + GHDN VRGV+ + + ++S +D+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW------VRGVLFHSGGKFILSCADDKT 361
Query: 483 VKVWHFK 489
++VW +K
Sbjct: 362 LRVWDYK 368
Score = 65 (27.9 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDT-----FKIMGKRW 161
GH SPV ++ P ++S E++ +KVWD + + L D+ F GK
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 162 NSC 164
SC
Sbjct: 166 ASC 168
Score = 47 (21.6 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 558 WLITASMDCTIRVWDIPSSQLI 579
+L++ S D TI++WD+ + +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL 331
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK--LDN--GISFFRTHQ 512
GH V V+ + +++S D T+KVW + +TG R++K D+ ISF H
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF--DHS 161
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+LA C D T+ + D IR + GH ++ P+ +++AS D TI++W+
Sbjct: 162 -GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 573 IPSSQLIDCF 582
+ + + F
Sbjct: 221 VQTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG D+T+K+W TG + + DN + H + C DD T+ + D
Sbjct: 311 LLSGSRDKTIKMWDVS-TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ L+ H +T DF + +++T S+D T++VW+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 116 (45.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
PVT + F +MVS S + VW+ E E +K H V F ++ LL +
Sbjct: 110 PVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLAS 167
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
S D T+KLW F + +R GH + + N D+I+SA+ D T++++ +
Sbjct: 168 CSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 326 S 326
+
Sbjct: 223 T 223
Score = 83 (34.3 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
R +GHD+ +V V + N + IV S D+T+K+W QTG +
Sbjct: 186 RTMHGHDH---NVSSV--AIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVR 238
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558
R +Q+ +++A C +D TV + + T +L H + ++P+S +
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 75 (31.5 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E HR VT F ++V++S D T+K+W ++ D R L+ GH+
Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDS 152
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFN 323
I F +S + S + D T+++++
Sbjct: 153 VQDISF-DHSGKLLASCSADMTIKLWD 178
Score = 71 (30.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 424 GNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482
G F+L G + +++ +G + GHDN VRGV+ + + ++S +D+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW------VRGVLFHSGGKFILSCADDKT 361
Query: 483 VKVWHFK 489
++VW +K
Sbjct: 362 LRVWDYK 368
Score = 65 (27.9 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDT-----FKIMGKRW 161
GH SPV ++ P ++S E++ +KVWD + + L D+ F GK
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 162 NSC 164
SC
Sbjct: 166 ASC 168
Score = 47 (21.6 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 558 WLITASMDCTIRVWDIPSSQLI 579
+L++ S D TI++WD+ + +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL 331
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK--LDN--GISFFRTHQ 512
GH V V+ + +++S D T+KVW + +TG R++K D+ ISF H
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF--DHS 161
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+LA C D T+ + D IR + GH ++ P+ +++AS D TI++W+
Sbjct: 162 -GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 573 IPSSQLIDCF 582
+ + + F
Sbjct: 221 VQTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG D+T+K+W TG + + DN + H + C DD T+ + D
Sbjct: 311 LLSGSRDKTIKMWDVS-TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ L+ H +T DF + +++T S+D T++VW+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 116 (45.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
PVT + F +MVS S + VW+ E E +K H V F ++ LL +
Sbjct: 110 PVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLAS 167
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
S D T+KLW F + +R GH + + N D+I+SA+ D T++++ +
Sbjct: 168 CSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 326 S 326
+
Sbjct: 223 T 223
Score = 83 (34.3 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
R +GHD+ +V V + N + IV S D+T+K+W QTG +
Sbjct: 186 RTMHGHDH---NVSSV--AIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVR 238
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558
R +Q+ +++A C +D TV + + T +L H + ++P+S +
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 75 (31.5 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E HR VT F ++V++S D T+K+W ++ D R L+ GH+
Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDS 152
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFN 323
I F +S + S + D T+++++
Sbjct: 153 VQDISF-DHSGKLLASCSADMTIKLWD 178
Score = 71 (30.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 424 GNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482
G F+L G + +++ +G + GHDN VRGV+ + + ++S +D+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW------VRGVLFHSGGKFILSCADDKT 361
Query: 483 VKVWHFK 489
++VW +K
Sbjct: 362 LRVWDYK 368
Score = 65 (27.9 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDT-----FKIMGKRW 161
GH SPV ++ P ++S E++ +KVWD + + L D+ F GK
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 162 NSC 164
SC
Sbjct: 166 ASC 168
Score = 47 (21.6 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 558 WLITASMDCTIRVWDIPSSQLI 579
+L++ S D TI++WD+ + +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL 331
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK--LDN--GISFFRTHQ 512
GH V V+ + +++S D T+KVW + +TG R++K D+ ISF H
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF--DHS 161
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+LA C D T+ + D IR + GH ++ P+ +++AS D TI++W+
Sbjct: 162 -GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 573 IPSSQLIDCF 582
+ + + F
Sbjct: 221 VQTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG D+T+K+W TG + + DN + H + C DD T+ + D
Sbjct: 311 LLSGSRDKTIKMWDVS-TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ L+ H +T DF + +++T S+D T++VW+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 116 (45.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
PVT + F +MVS S + VW+ E E +K H V F ++ LL +
Sbjct: 110 PVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLAS 167
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
S D T+KLW F + +R GH + + N D+I+SA+ D T++++ +
Sbjct: 168 CSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 326 S 326
+
Sbjct: 223 T 223
Score = 83 (34.3 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
R +GHD+ +V V + N + IV S D+T+K+W QTG +
Sbjct: 186 RTMHGHDH---NVSSV--AIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVR 238
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558
R +Q+ +++A C +D TV + + T +L H + ++P+S +
Sbjct: 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 75 (31.5 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E HR VT F ++V++S D T+K+W ++ D R L+ GH+
Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLK---GHTDS 152
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFN 323
I F +S + S + D T+++++
Sbjct: 153 VQDISF-DHSGKLLASCSADMTIKLWD 178
Score = 71 (30.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 424 GNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482
G F+L G + +++ +G + GHDN VRGV+ + + ++S +D+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW------VRGVLFHSGGKFILSCADDKT 361
Query: 483 VKVWHFK 489
++VW +K
Sbjct: 362 LRVWDYK 368
Score = 65 (27.9 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDT-----FKIMGKRW 161
GH SPV ++ P ++S E++ +KVWD + + L D+ F GK
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 162 NSC 164
SC
Sbjct: 166 ASC 168
Score = 47 (21.6 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 558 WLITASMDCTIRVWDIPSSQLI 579
+L++ S D TI++WD+ + +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL 331
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 138 (53.6 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG D+T+K+W TG + + DN + H + C DD T+ I D
Sbjct: 311 LLSGSRDKTIKMWDIS-TGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKN 369
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ LS H +T DF S +++T S+D T++VW+
Sbjct: 370 KRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 31/127 (24%), Positives = 60/127 (47%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESS 515
GH V V+ + +++S D T+KVW + + G R++K + + Q
Sbjct: 106 GHRSPVTRVIFHPVFSLMVSASEDATIKVWDY-EAGDFE-RTLKGHTDSVQDISFDQTGK 163
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+LA C D T+ + D IR + GH ++ P+ +++AS D T+++W++ +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVAT 223
Query: 576 SQLIDCF 582
+ F
Sbjct: 224 GYCVKTF 230
Score = 117 (46.2 bits), Expect = 0.00089, P = 0.00089
Identities = 53/251 (21%), Positives = 103/251 (41%)
Query: 89 SANNIIYAWR-RGIDIVGTYKGHTSPVH--LILPFGPHLISVDEESNVKVWDIKAEETYL 145
SA+ I W +G + + T GH V I+P G H++S + +K+W++ Y
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATG--YC 226
Query: 146 ELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWG 205
+F + R N +L + V + K + E ++E I +W
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECI-SWA 285
Query: 206 PVTA---LSFRTDG-------P-PMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGA 254
P +A +S T P P ++SGS + +W++ + H V G
Sbjct: 286 PESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLV-GHDNWVRGV 344
Query: 255 HFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA 314
F +V+ + D TL++W + N R ++ H + F+ +S +++ +
Sbjct: 345 LFHPGGRFVVSCADDKTLRIWDYK----NKRCMKTLSAHEHFVTSLDFH-KASPYVVTGS 399
Query: 315 GDSTLRIFNTK 325
D T++++ +
Sbjct: 400 VDQTVKVWECR 410
Score = 110 (43.8 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 35/117 (29%), Positives = 53/117 (45%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
PVT + F +MVS S + VW+ E E +K H V F LL +
Sbjct: 110 PVTRVIFHPVFS-LMVSASEDATIKVWDYEAGDFERTLK-GHTDSVQDISFDQTGKLLAS 167
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322
S D T+KLW F + +R GH + + N D+I+SA+ D T++++
Sbjct: 168 CSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTMKMW 219
Score = 74 (31.1 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 24/87 (27%), Positives = 41/87 (47%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E HR VT F L+V++S D T+K+W ++ D R L+ GH+
Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFE-RTLK---GHTDS 152
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFN 323
I F + + S + D T+++++
Sbjct: 153 VQDISF-DQTGKLLASCSADMTIKLWD 178
Score = 72 (30.4 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 424 GNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482
G F+L G + ++I +G + GHDN VRGV+ + V+S +D+T
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNW------VRGVLFHPGGRFVVSCADDKT 361
Query: 483 VKVWHFKQTGKPPLRSIKL-DNGISFFRTHQESSMLAVCLDDFTVNI 528
+++W +K K ++++ ++ ++ H+ S + D TV +
Sbjct: 362 LRIWDYKN--KRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKV 406
Score = 69 (29.3 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDT-----FKIMGKRW 161
GH SPV ++ P ++S E++ +KVWD +A + L D+ F GK
Sbjct: 106 GHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLL 165
Query: 162 NSC 164
SC
Sbjct: 166 ASC 168
Score = 57 (25.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 22/77 (28%), Positives = 30/77 (38%)
Query: 72 HEDDIT-CLSSDFFHIYTSANN--IIYAWR-RGIDIVGTYKGHTSPVHLIL--PFGPHLI 125
H +T + F + SA+ I W D T KGHT V I G L
Sbjct: 107 HRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLA 166
Query: 126 SVDEESNVKVWDIKAEE 142
S + +K+WD + E
Sbjct: 167 SCSADMTIKLWDFQGFE 183
>SGD|S000004119 [details] [associations]
symbol:DIP2 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030515 "snoRNA binding" evidence=IPI] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945 EMBL:X91258
EMBL:U53881 EMBL:X89514 EMBL:U53877 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 InterPro:IPR007148 Pfam:PF04003
GO:GO:0034388 EMBL:Z73301 EMBL:Z73302 PIR:S59317 RefSeq:NP_013230.1
ProteinModelPortal:Q12220 SMR:Q12220 DIP:DIP-6494N IntAct:Q12220
MINT:MINT-620162 STRING:Q12220 PaxDb:Q12220 PeptideAtlas:Q12220
EnsemblFungi:YLR129W GeneID:850820 KEGG:sce:YLR129W CYGD:YLR129w
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 NextBio:967067 Genevestigator:Q12220
GermOnline:YLR129W Uniprot:Q12220
Length = 943
Score = 131 (51.2 bits), Expect = 8.0e-13, Sum P(3) = 8.0e-13
Identities = 40/157 (25%), Positives = 72/157 (45%)
Query: 121 GPHLISVDEESNVKVWDIKAEETYLELS--FDNDTFKIMGKRWNSCVNVLEPSPVVDIIG 178
GP + +V +WDIK + +LS G + C LE D++
Sbjct: 37 GPGQLITSALEDVNIWDIKTGDLVSKLSDGLPPGASDARGAKPAECT-YLEAHKDTDLLA 95
Query: 179 VGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238
VG ++ I + ++++ L+ F +T L F G ++SGS ++ VW+L +
Sbjct: 96 VGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGT-RLISGSKDSNIIVWDLVG-E 153
Query: 239 VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
V ++H+ +TG + E L+++S D +KLW
Sbjct: 154 VGLYKLRSHKDSITG-FWCQGEDWLISTSKDGMIKLW 189
Score = 128 (50.1 bits), Expect = 8.0e-13, Sum P(3) = 8.0e-13
Identities = 44/173 (25%), Positives = 78/173 (45%)
Query: 416 TCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVI 475
TC ++ G V++G +G + F++ S + + D + + + SD ++
Sbjct: 435 TCKFLPG-GLLVILGTRNGELQLFDLASSSLLDTI-EDAHDAAIWSL-DLTSDGKR--LV 489
Query: 476 SGGNDQTVKVWHFKQTGK----------PPLR-----SIKLDNGISFFRTHQESSMLAVC 520
+G D+TVK W FK P L+ +++L + I R + LA+
Sbjct: 490 TGSADKTVKFWDFKVENSLVPGTKNKFLPVLKLHHDTTLELTDDILCVRVSPDDRYLAIS 549
Query: 521 LDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
L D TV + +D+ L GH + D S DS+ +IT+S D I++W +
Sbjct: 550 LLDNTVKVFFLDSMKFYLSLYGHKLPVLSIDISFDSKMIITSSADKNIKIWGL 602
Score = 98 (39.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 50/204 (24%), Positives = 89/204 (43%)
Query: 133 VKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNIL 192
+KVWD+ ++ T L L+F+ G + + + +L+ + G + II+ +++
Sbjct: 103 IKVWDLMSK-TVL-LNFN-------GHK--AAITLLQFDGTGTRLISGSKDSNIIVWDLV 151
Query: 193 TDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ-VENQIKKAHRKVV 251
+ L + +T F G ++S S G + +W+L+ Q +E I AH
Sbjct: 152 GEVGLYKLRSHKDSITG--FWCQGEDWLISTSKDGMIKLWDLKTHQCIETHI--AHTGEC 207
Query: 252 TGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN--GRL--LRIREGHSAPPNY-IQFYGNS 306
G + LL+T+ D+ +K+W D + G+L + I E S I+F NS
Sbjct: 208 WG--LAVKDDLLITTGTDSQVKIWKLDIENDKMGGKLTEMGIFEKQSKQRGLKIEFITNS 265
Query: 307 SDN---ILSAAGDSTLRIFNTKSE 327
SD D T+ F + E
Sbjct: 266 SDKTSFFYIQNADKTIETFRIRKE 289
Score = 85 (35.0 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 30/125 (24%), Positives = 55/125 (44%)
Query: 153 TFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSF 212
T ++ G+R + V ++ S ++ SN + + NI T + + F G F
Sbjct: 384 TIELQGQRTD--VRSIDISDDNKLLATA-SNGSLKIWNIKTHKCIRTF--ECGYALTCKF 438
Query: 213 RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTL 272
G +++ G+ G L +++L + + I+ AH + + LVT S D T+
Sbjct: 439 LPGGL-LVILGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKTV 497
Query: 273 KLWIF 277
K W F
Sbjct: 498 KFWDF 502
Score = 79 (32.9 bits), Expect = 7.0e-08, Sum P(3) = 7.0e-08
Identities = 22/108 (20%), Positives = 47/108 (43%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
++++I+ D+ +K+W G + I + +S C D V D
Sbjct: 585 SKMIITSSADKNIKIWGL-DFGDCHKSLFAHQDSIMNVKFLPQSHNFFSCSKDAVVKYWD 643
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ I+KL H ++ + D +++++S D +IR+W+ Q+
Sbjct: 644 GEKFECIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIWEETEDQV 691
Score = 73 (30.8 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 90 ANNIIYAWR-RGIDIVGTYKGHTSPVHLILPF---GPHLISVDEESNVKVWDIKAEETYL 145
A+ +I W ++ + GH + + L L F G LIS ++SN+ VWD+ E
Sbjct: 99 ADGVIKVWDLMSKTVLLNFNGHKAAITL-LQFDGTGTRLISGSKDSNIIVWDLVGEVGLY 157
Query: 146 ELSFDNDT---FKIMGKRW 161
+L D+ F G+ W
Sbjct: 158 KLRSHKDSITGFWCQGEDW 176
Score = 68 (29.0 bits), Expect = 8.8e-07, Sum P(3) = 8.8e-07
Identities = 16/71 (22%), Positives = 28/71 (39%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+S M+ D + I +D + L H + + F P S + S D ++ WD
Sbjct: 584 DSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDSIMNVKFLPQSHNFFSCSKDAVVKYWD 643
Query: 573 IPSSQLIDCFQ 583
+ +C Q
Sbjct: 644 ---GEKFECIQ 651
Score = 66 (28.3 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 72 HEDDIT---CLSSDFFHIYTSANNIIYAWR-RGIDIVGTYKGHTSPVHLILPFGPHLISV 127
H+D IT C D+ I TS + +I W + + T+ HT + LI+
Sbjct: 162 HKDSITGFWCQGEDWL-ISTSKDGMIKLWDLKTHQCIETHIAHTGECWGLAVKDDLLITT 220
Query: 128 DEESNVKVWDIKAE 141
+S VK+W + E
Sbjct: 221 GTDSQVKIWKLDIE 234
Score = 61 (26.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
+ T TI +L G + D S D++ L TAS + ++++W+I + + I F+
Sbjct: 380 LKTHTI--ELQGQRTDVRSIDISDDNKLLATAS-NGSLKIWNIKTHKCIRTFE 429
Score = 51 (23.0 bits), Expect = 8.9e-05, Sum P(3) = 8.9e-05
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 91 NNIIYAWRRGIDIVGTYK--GHTSPVHLILPFGPH-LISVDEESNVKVWDIKAEE 142
+NII W + VG YK H + G LIS ++ +K+WD+K +
Sbjct: 143 SNII-VWDL-VGEVGLYKLRSHKDSITGFWCQGEDWLISTSKDGMIKLWDLKTHQ 195
Score = 47 (21.6 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 553 SPDSRWLITASMDCTIRVWDIPS 575
SPD R+L + +D T++V+ + S
Sbjct: 540 SPDDRYLAISLLDNTVKVFFLDS 562
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/71 (22%), Positives = 33/71 (46%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ +LA + ++ I +I T IR G F P +I + + ++++D
Sbjct: 402 DNKLLATASNG-SLKIWNIKTHKCIRTFE--CGYALTCKFLPGGLLVILGTRNGELQLFD 458
Query: 573 IPSSQLIDCFQ 583
+ SS L+D +
Sbjct: 459 LASSSLLDTIE 469
Score = 42 (19.8 bits), Expect = 8.0e-13, Sum P(3) = 8.0e-13
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 306 SSDN-ILSAAGDSTLRIFNTKS 326
S DN +L+ A + +L+I+N K+
Sbjct: 400 SDDNKLLATASNGSLKIWNIKT 421
Score = 38 (18.4 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 5/18 (27%), Positives = 13/18 (72%)
Query: 480 DQTVKVWHFKQTGKPPLR 497
++ +K+W K+ G+ P++
Sbjct: 770 NRDMKLWQRKKLGEAPIK 787
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 133 (51.9 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 43/173 (24%), Positives = 76/173 (43%)
Query: 409 QAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSD 468
Q + + TC+ + G + +GY G + F++ SG ++ GH + + D
Sbjct: 62 QGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFN-----GHKAAITTLKYD 116
Query: 469 NLNQIVISGGNDQTVKVWH-FKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVN 527
L + SG D + VW ++G L+ K + I+ +E ++L D V
Sbjct: 117 QLGGRLASGSKDTDIIVWDVINESGLYRLKGHK--DAITQALFLREKNLLVTSGKDTMVK 174
Query: 528 IIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLID 580
D+DT + + GH ++ + + LIT + D +RVWDI Q I+
Sbjct: 175 WWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWDIAYLQEIE 227
Score = 127 (49.8 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 47/209 (22%), Positives = 86/209 (41%)
Query: 375 NNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG 434
+NIA + + + +W+ +S + + + C+ A C + V+IG +G
Sbjct: 426 DNIAVLSAAADSIKIWN--RSTLQCIRTMT--CEYA-----LCSFFVPGDRQVVIGTKTG 476
Query: 435 HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF------ 488
+ +++ SG + H G + + + ++GG D++VK W F
Sbjct: 477 KLQLYDLASGNLL-----ETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDFELVKDE 531
Query: 489 ----KQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
K+ R+++LD + +LAV L D TV I +DT L GH
Sbjct: 532 NSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHK 591
Query: 545 GQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ D S D + T S D +++W +
Sbjct: 592 LPVICMDISHDGALIATGSADRNVKIWGL 620
Score = 126 (49.4 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 55/221 (24%), Positives = 95/221 (42%)
Query: 103 IVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN 162
++G+ KG+ V L G + ++V +V +WD++ E L L G +
Sbjct: 18 VIGSQKGNIVFVTLRGEKGRY-VAVPACEHVFIWDLRKGEKILILQ---------GLKQE 67
Query: 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS 222
V L PSP + VG + I + ++L+ E + F +T L + G + S
Sbjct: 68 --VTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITTLKYDQLGG-RLAS 124
Query: 223 GSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG 282
GS + VW++ + ++K H+ +T A FL + LLVTS D +K W D
Sbjct: 125 GSKDTDIIVWDVINESGLYRLK-GHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQ-- 181
Query: 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
+ GH + +++ A DS LR+++
Sbjct: 182 --HCFKTMVGHRTEVWGLVLLSEEK-RLITGASDSELRVWD 219
Score = 87 (35.7 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532
++ +G D+ VK+W G D+ + + + +S + D + D D
Sbjct: 605 LIATGSADRNVKIWGL-DFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDAD 663
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
I+ L GH ++ SP +++++S D ++R+W+ LI
Sbjct: 664 KFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWERTREPLI 710
Score = 56 (24.8 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+ +++A D V I +D + L H + F P S TA D I+ WD
Sbjct: 602 DGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWD 661
Score = 53 (23.7 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 540 LSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ GH + FS D+ +++A+ D +I++W+ + Q I
Sbjct: 411 IGGHRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCI 449
Score = 48 (22.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 22/78 (28%), Positives = 36/78 (46%)
Query: 86 IYTSANNIIYAWRRGIDIVGTYK---GHTSPVH--LILPFGPHLISVDEESNVKVWDIKA 140
+ TS + + W +D +K GH + V ++L LI+ +S ++VWDI A
Sbjct: 164 LVTSGKDTMVKWW-DLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWDI-A 221
Query: 141 EETYLELSFDNDTFKIMG 158
+E + D KI G
Sbjct: 222 YLQEIEDPEEPDPKKIKG 239
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 127 (49.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 47/164 (28%), Positives = 73/164 (44%)
Query: 420 ITHCGNFVLIGYSSGHVDR-FNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG 478
I+ CG +++ SG DR + S GS H Q GH VR + I+++G
Sbjct: 304 ISQCGRYIV----SGSTDRTVKVWSTVD-GSLLHTLQ-GHTSTVRCMAM--AGSILVTGS 355
Query: 479 NDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLD-DFTVNIIDIDTCTII 537
D T++VW ++G+ L + R Q V DFTV I + T I
Sbjct: 356 RDTTLRVWDV-ESGR---HLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCI 411
Query: 538 RKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDC 581
R L+GH ++ F + + + S+D +IRVWD + +C
Sbjct: 412 RTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC 455
Score = 120 (47.3 bits), Expect = 6.9e-12, Sum P(3) = 6.9e-12
Identities = 42/150 (28%), Positives = 66/150 (44%)
Query: 433 SGHVDRFNIQS-GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491
SG D F ++ AH G GH V ++ ++ IV SG D +++VW F T
Sbjct: 393 SGGYD-FTVKIWNAHTGRCIR-TLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDF--T 448
Query: 492 GKPPLRSIKLDNGISFFRTHQE--SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTD 549
+ L G + + + ++L C D V + DI T + LSGH +T
Sbjct: 449 RPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITS 508
Query: 550 ADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ + T+S D T+++WDI LI
Sbjct: 509 LQWF-GRNMVATSSDDGTVKLWDIERGALI 537
Score = 96 (38.9 bits), Expect = 6.9e-12, Sum P(3) = 6.9e-12
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
+VSGS + VW+ D + + ++ H V + +LVT S D TL++W +
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQ-GHTSTVRCMAMAGS--ILVTGSRDTTLRVWDVE- 366
Query: 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
+GR L GH A +QF G + ++S D T++I+N
Sbjct: 367 ---SGRHLATLHGHHAAVRCVQFDGTT---VVSGGYDFTVKIWN 404
Score = 89 (36.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 29/120 (24%), Positives = 59/120 (49%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+T + D ++V+GS+ L VW ++ +V + H V + +V+
Sbjct: 259 ITCMQIHDD---VLVTGSDDNTLKVWCIDKGEVMYTLV-GHTGGVWTSQISQCGRYIVSG 314
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
S D T+K+W DG+ LL +GH++ + G+ +++ + D+TLR+++ +S
Sbjct: 315 STDRTVKVW--STVDGS--LLHTLQGHTSTVRCMAMAGSI---LVTGSRDTTLRVWDVES 367
Score = 80 (33.2 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 232 WNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE 291
WN + + + + H V ++++ +LVT S DNTLK+W DK G ++
Sbjct: 240 WNANPI-MGSAVLRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDK----GEVMYTLV 293
Query: 292 GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
GH+ Q I+S + D T+++++T
Sbjct: 294 GHTGGVWTSQI-SQCGRYIVSGSTDRTVKVWST 325
Score = 69 (29.3 bits), Expect = 6.9e-12, Sum P(3) = 6.9e-12
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 72 HEDD-ITCLS-SDFFHIYTSANNIIYAW--RRGIDIVGTYKGHTSPVHL--ILPFGPHLI 125
HED ITC+ D + S +N + W +G +++ T GHT V I G +++
Sbjct: 254 HEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKG-EVMYTLVGHTGGVWTSQISQCGRYIV 312
Query: 126 SVDEESNVKVW 136
S + VKVW
Sbjct: 313 SGSTDRTVKVW 323
Score = 69 (29.3 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 89 SANNIIYAWRRGID--IVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKA 140
S + + W +D ++ T +GHTS V + G L++ ++ ++VWD+++
Sbjct: 315 STDRTVKVWST-VDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVES 367
Score = 55 (24.4 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 37/155 (23%), Positives = 66/155 (42%)
Query: 87 YTSANNIIYAWRRGIDIVGT--YKGHTSPVHLILPFGPH---LISVDEESNVKVWDI-KA 140
Y A+ I W I+G+ +GH H+I H L++ +++ +KVW I K
Sbjct: 230 YLRADKIEKNWNAN-PIMGSAVLRGHED--HVITCMQIHDDVLVTGSDDNTLKVWCIDKG 286
Query: 141 EETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEF 200
E Y + G W S + S I G +++ + + + + D SL+
Sbjct: 287 EVMYTLVGHT-------GGVWTSQI-----SQCGRYIVSGSTDRTVKVWSTV-DGSLLHT 333
Query: 201 IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
+Q G + + ++V+GS L VW++E
Sbjct: 334 LQ--GHTSTVRCMAMAGSILVTGSRDTTLRVWDVE 366
Score = 48 (22.0 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 473 IVISGGNDQTVKVWHFKQ-TGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531
I++S D V+VW + T L + + I+ + + M+A DD TV + DI
Sbjct: 475 ILVSCNADSHVRVWDIHEGTCVHMLSGHR--SAITSLQWFGRN-MVATSSDDGTVKLWDI 531
Query: 532 DTCTIIRKL 540
+ +IR L
Sbjct: 532 ERGALIRDL 540
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 127 (49.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 47/164 (28%), Positives = 73/164 (44%)
Query: 420 ITHCGNFVLIGYSSGHVDR-FNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG 478
I+ CG +++ SG DR + S GS H Q GH VR + I+++G
Sbjct: 304 ISQCGRYIV----SGSTDRTVKVWSTVD-GSLLHTLQ-GHTSTVRCMAM--AGSILVTGS 355
Query: 479 NDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLD-DFTVNIIDIDTCTII 537
D T++VW ++G+ L + R Q V DFTV I + T I
Sbjct: 356 RDTTLRVWDV-ESGR---HLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCI 411
Query: 538 RKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDC 581
R L+GH ++ F + + + S+D +IRVWD + +C
Sbjct: 412 RTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC 455
Score = 120 (47.3 bits), Expect = 6.9e-12, Sum P(3) = 6.9e-12
Identities = 42/150 (28%), Positives = 66/150 (44%)
Query: 433 SGHVDRFNIQS-GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491
SG D F ++ AH G GH V ++ ++ IV SG D +++VW F T
Sbjct: 393 SGGYD-FTVKIWNAHTGRCIR-TLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDF--T 448
Query: 492 GKPPLRSIKLDNGISFFRTHQE--SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTD 549
+ L G + + + ++L C D V + DI T + LSGH +T
Sbjct: 449 RPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITS 508
Query: 550 ADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ + T+S D T+++WDI LI
Sbjct: 509 LQWF-GRNMVATSSDDGTVKLWDIERGALI 537
Score = 96 (38.9 bits), Expect = 6.9e-12, Sum P(3) = 6.9e-12
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
+VSGS + VW+ D + + ++ H V + +LVT S D TL++W +
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQ-GHTSTVRCMAMAGS--ILVTGSRDTTLRVWDVE- 366
Query: 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
+GR L GH A +QF G + ++S D T++I+N
Sbjct: 367 ---SGRHLATLHGHHAAVRCVQFDGTT---VVSGGYDFTVKIWN 404
Score = 89 (36.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 29/120 (24%), Positives = 59/120 (49%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+T + D ++V+GS+ L VW ++ +V + H V + +V+
Sbjct: 259 ITCMQIHDD---VLVTGSDDNTLKVWCIDKGEVMYTLV-GHTGGVWTSQISQCGRYIVSG 314
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
S D T+K+W DG+ LL +GH++ + G+ +++ + D+TLR+++ +S
Sbjct: 315 STDRTVKVW--STVDGS--LLHTLQGHTSTVRCMAMAGSI---LVTGSRDTTLRVWDVES 367
Score = 80 (33.2 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 232 WNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE 291
WN + + + + H V ++++ +LVT S DNTLK+W DK G ++
Sbjct: 240 WNANPI-MGSAVLRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDK----GEVMYTLV 293
Query: 292 GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
GH+ Q I+S + D T+++++T
Sbjct: 294 GHTGGVWTSQI-SQCGRYIVSGSTDRTVKVWST 325
Score = 69 (29.3 bits), Expect = 6.9e-12, Sum P(3) = 6.9e-12
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 72 HEDD-ITCLS-SDFFHIYTSANNIIYAW--RRGIDIVGTYKGHTSPVHL--ILPFGPHLI 125
HED ITC+ D + S +N + W +G +++ T GHT V I G +++
Sbjct: 254 HEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKG-EVMYTLVGHTGGVWTSQISQCGRYIV 312
Query: 126 SVDEESNVKVW 136
S + VKVW
Sbjct: 313 SGSTDRTVKVW 323
Score = 69 (29.3 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 89 SANNIIYAWRRGID--IVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKA 140
S + + W +D ++ T +GHTS V + G L++ ++ ++VWD+++
Sbjct: 315 STDRTVKVWST-VDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVES 367
Score = 55 (24.4 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 37/155 (23%), Positives = 66/155 (42%)
Query: 87 YTSANNIIYAWRRGIDIVGT--YKGHTSPVHLILPFGPH---LISVDEESNVKVWDI-KA 140
Y A+ I W I+G+ +GH H+I H L++ +++ +KVW I K
Sbjct: 230 YLRADKIEKNWNAN-PIMGSAVLRGHED--HVITCMQIHDDVLVTGSDDNTLKVWCIDKG 286
Query: 141 EETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEF 200
E Y + G W S + S I G +++ + + + + D SL+
Sbjct: 287 EVMYTLVGHT-------GGVWTSQI-----SQCGRYIVSGSTDRTVKVWSTV-DGSLLHT 333
Query: 201 IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
+Q G + + ++V+GS L VW++E
Sbjct: 334 LQ--GHTSTVRCMAMAGSILVTGSRDTTLRVWDVE 366
Score = 48 (22.0 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 473 IVISGGNDQTVKVWHFKQ-TGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531
I++S D V+VW + T L + + I+ + + M+A DD TV + DI
Sbjct: 475 ILVSCNADSHVRVWDIHEGTCVHMLSGHR--SAITSLQWFGRN-MVATSSDDGTVKLWDI 531
Query: 532 DTCTIIRKL 540
+ +IR L
Sbjct: 532 ERGALIRDL 540
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 140 (54.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 37/131 (28%), Positives = 63/131 (48%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVW-H----FKQTGKPPLRSIKLDNGISFFRTH 511
GH V V+ + +++S D T+KVW H F++T K S++ ISF T
Sbjct: 106 GHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQ---DISFDHT- 161
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+LA C D T+ + D IR + GH ++ P+ +++AS D TI++W
Sbjct: 162 --GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 572 DIPSSQLIDCF 582
++ + + F
Sbjct: 220 EVATGYCVKTF 230
Score = 130 (50.8 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 28/99 (28%), Positives = 48/99 (48%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG D+T+K+W G + + DN + H + C DD T+ I D
Sbjct: 311 LLSGSRDKTIKMWDVS-IGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKN 369
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+ LS H +T DF + +++T S+D T++VW+
Sbjct: 370 KRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 107 (42.7 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 34/117 (29%), Positives = 54/117 (46%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
PVT + F ++VS S + VW+ E E +K H V F + LL +
Sbjct: 110 PVTRVIFHPVFS-VIVSASEDATIKVWDHETGDFERTLK-GHTDSVQDISFDHTGKLLAS 167
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322
S D T+KLW F + +R GH + + N D+I+SA+ D T++++
Sbjct: 168 CSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMW 219
Score = 102 (41.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 26/122 (21%), Positives = 57/122 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESS 515
GH V+ + D+ +++ S D T+K+W F+ G +R++ D+ +S
Sbjct: 148 GHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ--GFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+ D T+ + ++ T ++ +GH + + D + ++S D T+RVW + +
Sbjct: 206 HIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVAT 265
Query: 576 SQ 577
+
Sbjct: 266 KE 267
Score = 68 (29.0 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 23/87 (26%), Positives = 41/87 (47%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E HR VT F ++V++S D T+K+W + D R L+ GH+
Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFE-RTLK---GHTDS 152
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFN 323
I F ++ + S + D T+++++
Sbjct: 153 VQDISF-DHTGKLLASCSADMTIKLWD 178
Score = 64 (27.6 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFK 489
GH VRGV+ + ++S +D+T+++W +K
Sbjct: 336 GHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYK 368
Score = 63 (27.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWD 137
GH SPV ++ P ++S E++ +KVWD
Sbjct: 106 GHRSPVTRVIFHPVFSVIVSASEDATIKVWD 136
Score = 44 (20.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 292 GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
GH +P + F+ S I+SA+ D+T+++++ ++ + L
Sbjct: 106 GHRSPVTRVIFHPVFSV-IVSASEDATIKVWDHETGDFERTL 146
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 42/173 (24%), Positives = 75/173 (43%)
Query: 409 QAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSD 468
Q + + TC+ + G + +GY G + F++ SG ++ GH + + D
Sbjct: 62 QGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFN-----GHKAAITSLKYD 116
Query: 469 NLNQIVISGGNDQTVKVWH-FKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVN 527
L + SG D + VW ++G L+ K + I+ +E ++L D V
Sbjct: 117 QLGGRLASGSKDTDIIVWDVINESGLYRLKGHK--DAITQALFLREKNLLVTSGKDTMVK 174
Query: 528 IIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLID 580
D+DT + + GH ++ + + LIT + D +R WDI Q I+
Sbjct: 175 WWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGASDSELRAWDISYLQEIE 227
Score = 124 (48.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 47/209 (22%), Positives = 86/209 (41%)
Query: 375 NNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG 434
+NIA + + + +W+ +S + + + C+ A C + V+IG +G
Sbjct: 426 DNIAILSAAADSIKIWN--RSTLQCIRTMA--CEYA-----LCSFFVPGDRQVVIGTKTG 476
Query: 435 HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF------ 488
+ +++ SG + H G + + + ++GG D++VK W F
Sbjct: 477 KLQLYDLASGNLL-----ETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFELVKDE 531
Query: 489 ----KQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
K+ R+++LD + +LAV L D TV I +DT L GH
Sbjct: 532 NSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHK 591
Query: 545 GQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ D S D + T S D +++W +
Sbjct: 592 LPVICMDISYDGALIATGSADRNVKIWGL 620
Score = 122 (48.0 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 55/221 (24%), Positives = 95/221 (42%)
Query: 103 IVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN 162
++G+ KG+ V L G + ++V +V +WD++ E L L G +
Sbjct: 18 LIGSQKGNIVFVTLRGEKGRY-VAVPACEHVFIWDLRKGEKILILQ---------GLKHE 67
Query: 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS 222
V L PSP + VG + I + ++L+ E + F +T+L + G + S
Sbjct: 68 --VTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITSLKYDQLGG-RLAS 124
Query: 223 GSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG 282
GS + VW++ + ++K H+ +T A FL + LLVTS D +K W D
Sbjct: 125 GSKDTDIIVWDVINESGLYRLK-GHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQ-- 181
Query: 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
+ GH + +++ A DS LR ++
Sbjct: 182 --HCFKTMVGHRTEVWGLVLVSEEK-RLITGASDSELRAWD 219
Score = 89 (36.4 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 24/107 (22%), Positives = 47/107 (43%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532
++ +G D+ VK+W G D+ + + R +S + D + D D
Sbjct: 605 LIATGSADRNVKIWGL-DFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWDAD 663
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
I+ L GH ++ SP +++++S D ++R+W+ LI
Sbjct: 664 KFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWERTREPLI 710
Score = 54 (24.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 540 LSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ GH + FS D+ +++A+ D +I++W+ + Q I
Sbjct: 411 IGGHRSDVRTLSFSSDNIAILSAAAD-SIKIWNRSTLQCI 449
Score = 54 (24.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+ +++A D V I +D + L H + F P S TA D I+ WD
Sbjct: 602 DGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWD 661
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 125 (49.1 bits), Expect = 0.00038, P = 0.00038
Identities = 41/166 (24%), Positives = 72/166 (43%)
Query: 409 QAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSD 468
Q + + TC+ + G + +GY G + F++ SG ++ GH V + D
Sbjct: 62 QGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFN-----GHKAAVTSLKYD 116
Query: 469 NLNQIVISGGNDQTVKVWH-FKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVN 527
L + SG D + VW ++G L+ K + I+ +E ++L D V
Sbjct: 117 QLGGRLASGSKDTDIIVWDVINESGLYRLKGHK--DAITQALFLREKNLLVSSGKDTMVK 174
Query: 528 IIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
D+DT + + GH ++ + + LIT + D +R WDI
Sbjct: 175 WWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAWDI 220
Score = 123 (48.4 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 47/209 (22%), Positives = 85/209 (40%)
Query: 375 NNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG 434
+NIA + + +W+ +S + + + C+ A C + V+IG +G
Sbjct: 426 DNIAVLSGAAESIKIWN--RSTLQCIRTMT--CEYA-----LCSFFVPGDRQVVIGTKTG 476
Query: 435 HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF------ 488
+ +++ SG + H G + + + ++GG D++VK W F
Sbjct: 477 KLQLYDLASGNLL-----ETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFELVKDE 531
Query: 489 ----KQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
K+ R+++LD + +LAV L D TV I +DT L GH
Sbjct: 532 NSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHK 591
Query: 545 GQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ D S D + T S D +++W +
Sbjct: 592 LPVICMDISYDGALIATGSADRNVKIWGL 620
Score = 118 (46.6 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 48/176 (27%), Positives = 81/176 (46%)
Query: 103 IVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN 162
++G+ KG+ V L G + ++V +V +WD++ E L L G +
Sbjct: 18 LIGSQKGNIVFVTLRGEKGRY-VAVPACEHVFIWDLRKGEKILILQ---------GLKHE 67
Query: 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS 222
V L PSP + VG + I + ++L+ E + F VT+L + G + S
Sbjct: 68 --VTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAVTSLKYDQLGG-RLAS 124
Query: 223 GSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
GS + VW++ + ++K H+ +T A FL + LLV+S D +K W D
Sbjct: 125 GSKDTDIIVWDVINESGLYRLK-GHKDAITQALFLREKNLLVSSGKDTMVKWWDLD 179
Score = 95 (38.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 26/117 (22%), Positives = 55/117 (47%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGI-SFFRTHQESS 515
GH VR +S + + I + G +++K+W+ + T + +R++ + + SFF
Sbjct: 413 GHRSDVR-TLSFSSDNIAVLSGAAESIKIWN-RSTLQC-IRTMTCEYALCSFFVPGDRQV 469
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ + + D+ + ++ + H G L SPD R +T D +++ WD
Sbjct: 470 VIGTKTGK--LQLYDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWD 524
Score = 86 (35.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532
++ +G D+ VK+W G D+ + + + +S + D + D D
Sbjct: 605 LIATGSADRNVKIWGL-DFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDAD 663
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
++ L GH ++ SP +++++S D ++R+W+ LI
Sbjct: 664 KFEHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLWERTREPLI 710
Score = 75 (31.5 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 39/186 (20%), Positives = 79/186 (42%)
Query: 94 IYAW--RRGIDIVGTYKGHTSPVHLILPF--GPHLISVDEESNVKVWDIKAEETYLELSF 149
++ W R+G I+ +G V + P G HL E+ +++++ + + E
Sbjct: 47 VFIWDLRKGEKIL-ILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGE------- 98
Query: 150 DNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTA 209
N TF G + + V L+ + + G + II+ +++ + L +T
Sbjct: 99 GNVTFN--GHK--AAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQ 154
Query: 210 LSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD 269
F + ++ SG +T + W+L+ + + HR V G + E L+T + D
Sbjct: 155 ALFLREKNLLVSSGKDT-MVKWWDLDTQHCFKTVV-GHRTEVWGLVLVSEEKRLITGASD 212
Query: 270 NTLKLW 275
+ L+ W
Sbjct: 213 SELRAW 218
Score = 55 (24.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+ +++A D V I +D + L H + F P S TA D I+ WD
Sbjct: 602 DGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWD 661
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 119 (46.9 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 31/113 (27%), Positives = 54/113 (47%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS-FFRTHQESSMLAVCLDDFTVNIID 530
++++S D+T+K+W T K + + G + F + + +A D TV I D
Sbjct: 157 RLIVSCSEDKTIKIWD--TTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWD 214
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
I +++ H G + F P +LITAS D T+++ D+ +LI Q
Sbjct: 215 IRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ 267
Score = 114 (45.2 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 29/127 (22%), Positives = 58/127 (45%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWH-FKQTGKPPLRSIKLDNGISFFRTHQESSM 516
H VR V Q + S D+++KVW+ ++Q L + + + + + +
Sbjct: 101 HTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSL--YRHTHWVRCAKFSPDGRL 158
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ C +D T+ I D + S +G F+P+ + +A D T+++WDI +
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVN 218
Query: 577 QLIDCFQ 583
+L+ +Q
Sbjct: 219 KLLQHYQ 225
Score = 112 (44.5 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 32/117 (27%), Positives = 58/117 (49%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+T++ F +G + +GS L +W+L Q H+ V+T F LL ++
Sbjct: 21 ITSVDFSPNGK-QLATGSWDTFLMLWSLRP-QARAFRYVGHKDVITSVQFSPLGNLLASA 78
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
S D T++LWI DK G+ + H+AP + F + + SA+ D +++++N
Sbjct: 79 SRDRTIRLWIPDK---RGKSSEFK-AHTAPVRSVDFSADGQF-LASASEDKSIKVWN 130
Score = 103 (41.3 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 30/113 (26%), Positives = 49/113 (43%)
Query: 461 GVRGVVSDNLNQIVI-SGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLA 518
G V+ N N I S G+D TVK+W + K L+ ++ +G ++ H + L
Sbjct: 187 GFANFVAFNPNGTCIASAGSDHTVKIWDIR-VNKL-LQHYQVHSGGVNCVSFHPSGNYLI 244
Query: 519 VCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
D T+ I+D+ +I L GH G + FS + D + +W
Sbjct: 245 TASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 71 (30.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 28/89 (31%), Positives = 38/89 (42%)
Query: 235 EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS 294
ED +E K H+ +T F N L T S D L LW R R GH
Sbjct: 6 EDPVLERYFK-GHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRP---QARAFRY-VGHK 60
Query: 295 APPNYIQFYGNSSDNIL-SAAGDSTLRIF 322
+QF + N+L SA+ D T+R++
Sbjct: 61 DVITSVQF--SPLGNLLASASRDRTIRLW 87
Score = 61 (26.5 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 24/94 (25%), Positives = 38/94 (40%)
Query: 417 CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476
CV GN+++ S G + ++ G R Y GH G V V ++ S
Sbjct: 233 CVSFHPSGNYLITASSDGTLKILDLLEG--RLIY---TLQGHTGPVFTVSFSKGGELFTS 287
Query: 477 GGNDQTVKVW-------HFKQTGKPPLRSIKLDN 503
GG D V +W ++K K L+ + D+
Sbjct: 288 GGADAQVLLWRTNFDELNYKDVSKRNLKRLHFDS 321
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 132 (51.5 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 40/128 (31%), Positives = 61/128 (47%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK--LD---NGISFFRTH 511
GH V +V +++ SG ND T+K+W PP S+K L+ N I
Sbjct: 195 GHSNWVLPLVFSPDGRLLASGSNDATIKLWD------PPSGSLKHTLEGHSNKIESLAFS 248
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+LA D T+ + D T + L GH + FSPDS+ L + S D TI++W
Sbjct: 249 PNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLW 308
Query: 572 DIPSSQLI 579
D P++ ++
Sbjct: 309 D-PATGIL 315
Score = 110 (43.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+ +LA + T+ + D TC + L GH + FSPD R L + S D TI++WD
Sbjct: 166 DGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWD 225
Query: 573 IPSSQL 578
PS L
Sbjct: 226 PPSGSL 231
Score = 96 (38.9 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNY 299
E Q + H + F + LL + S D T+KLW D A G L + EGHS+
Sbjct: 33 ELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLW--DPASGG--LKQTLEGHSSSVQS 88
Query: 300 IQFYGNSSDNILSAAGDSTLRIFNTKSET 328
+ F N + S + D+T++++N+ S++
Sbjct: 89 VAFSPNGQ-LLASGSSDTTIKLWNSASDS 116
Score = 93 (37.8 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+ ++F DG ++ SGSN + +W+ ++ Q + H V F N LL +
Sbjct: 44 IETVTFSPDGR-LLASGSNDTTIKLWDPASGGLK-QTLEGHSSSVQSVAFSPNGQLLASG 101
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGN 305
S D T+KLW + A + L EGHS + F N
Sbjct: 102 SSDTTIKLW--NSASDS--LKHTMEGHSDRVESVAFSPN 136
Score = 59 (25.8 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 17/71 (23%), Positives = 32/71 (45%)
Query: 106 TYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDND-----TFKIMG 158
T +GH+S V + P G L S ++ +K+W+ ++ + +D F G
Sbjct: 78 TLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG 137
Query: 159 KRWNSCVNVLE 169
+ WN + L+
Sbjct: 138 QLWNPAIGSLK 148
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 148 (57.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 61/260 (23%), Positives = 108/260 (41%)
Query: 72 HEDDITCLS-SDFFHIYTSANN--IIYAWRRGIDIVGT-YKGHTSPVHLI--LPFGPHLI 125
H+D +TC++ S H+ S + + W + T ++ HT+ V + G +
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFV 119
Query: 126 SVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKK 185
+ ++ VKVW ++ LS W C SP +I +K
Sbjct: 120 TASDDKTVKVWATHRQKFLFSLS--------QHINWVRCAKF---SPDGRLIVSASDDKT 168
Query: 186 IILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG-SNTGHLTVWNLEDRQVENQIK 244
+ L + + E + + + G VT + F G + +G NT + VW++ ++ Q
Sbjct: 169 VKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNT--VKVWDVRTHRLL-QHY 225
Query: 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304
+ H V G F + L+T+S D+TLK I D +G RLL GH P + F
Sbjct: 226 QLHSAAVNGLSFHPSGNYLITASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAF-S 280
Query: 305 NSSDNILSAAGDSTLRIFNT 324
+ + S D + ++ +
Sbjct: 281 RTGEYFASGGSDEQVMVWKS 300
Score = 128 (50.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 30/123 (24%), Positives = 60/123 (48%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSM 516
H+ VR ++++S +D+TVK+W ++ + + S G +++ H +
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWD--KSSRECVHSYCEHGGFVTYVDFHPSGTC 201
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+A D TV + D+ T +++ H + F P +LITAS D T+++ D+
Sbjct: 202 IAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEG 261
Query: 577 QLI 579
+L+
Sbjct: 262 RLL 264
Score = 126 (49.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESSM 516
H VR V + Q ++ +D+TVKVW + + L S+ N + + + +
Sbjct: 102 HTATVRSVHFCSDGQSFVTASDDKTVKVWATHR--QKFLFSLSQHINWVRCAKFSPDGRL 159
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ DD TV + D + + H G +T DF P + A MD T++VWD+ +
Sbjct: 160 IVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH 219
Query: 577 QLIDCFQ 583
+L+ +Q
Sbjct: 220 RLLQHYQ 226
Score = 103 (41.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 29/101 (28%), Positives = 43/101 (42%)
Query: 474 VISGGNDQTVKVWHFKQ---TGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
+ + G D TVKVW + L S + NG+SF H + L D T+ I+D
Sbjct: 202 IAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV-NGLSF---HPSGNYLITASSDSTLKILD 257
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ ++ L GH G T FS + + D + VW
Sbjct: 258 LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 102 (41.0 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 33/122 (27%), Positives = 60/122 (49%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
VT ++F G ++ SGS + +W + + + E+ + +AH V HF + VT+
Sbjct: 64 VTCVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTA 121
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDSTLRIFNT 324
S D T+K+W A + L H N+++ S D I+SA+ D T+++++
Sbjct: 122 SDDKTVKVW----ATHRQKFLFSLSQHI---NWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 325 KS 326
S
Sbjct: 175 SS 176
Score = 98 (39.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 28/118 (23%), Positives = 56/118 (47%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
VT + F + + SGS L VW+++ + + H+ VT +F + LL +
Sbjct: 22 VTCVDFSIN-TKQLASGSMDSCLMVWHMKPQSRAYRFT-GHKDAVTCVNFSPSGHLLASG 79
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
S D T+++W+ G + R H+A + F + + ++A+ D T++++ T
Sbjct: 80 SRDKTVRIWV-PNVKGESTVFR---AHTATVRSVHFCSDGQ-SFVTASDDKTVKVWAT 132
Score = 79 (32.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 30/98 (30%), Positives = 43/98 (43%)
Query: 235 EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS 294
ED +E K HR VT F N L + S D+ L +W R R GH
Sbjct: 7 EDPSLERHFK-GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKP---QSRAYRFT-GHK 61
Query: 295 APPNYIQFYGNSSDNIL-SAAGDSTLRIF--NTKSETS 329
+ F + S ++L S + D T+RI+ N K E++
Sbjct: 62 DAVTCVNF--SPSGHLLASGSRDKTVRIWVPNVKGEST 97
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 159 (61.0 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 96/468 (20%), Positives = 187/468 (39%)
Query: 121 GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG 180
G L S + ++++W + + L+ F+ + +N N+L G
Sbjct: 71 GALLASGYSDGSIRIWSMS--DYQLQAVFNGHRGSVTTMTFNRLGNILVS---------G 119
Query: 181 LSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE 240
+ ++I+ +I+T+ L +T++ + +++ S G + +W+ E +
Sbjct: 120 SKDTEVIVWDIITESGLFRLRGHRDQITSVKL-LERSNHLITSSKDGFIKIWDTETQHCI 178
Query: 241 NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI 300
I HR + G +E L + + DN ++ W + N R + +G P +I
Sbjct: 179 QTIV-GHRNPIWGIDVNPDETRLCSCTSDNQIRFW---RIPSNER--QREDGSGIEPKFI 232
Query: 301 QFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAXXXXXXXXXXXEKMNEKFILPP 360
N+ N D + +K E SN + + E+ + +
Sbjct: 233 V---NTPINSAVIIPDE-INEDGSKKENSNNS----NNNDIDDLEIISEEEFAKYYGSIT 284
Query: 361 VSQFSFGLAREKDWNNIAAIH-TGKNKVSLWSF--YKS-KMDDMFLVPE-RCKQA-KQSK 414
V S R N I A+ TGK V L+ Y + K++++ +V E R +Q K S
Sbjct: 285 VKAESVSGVRFDPTNKILAVQSTGKF-VDLFKITHYDTMKLEEISIVEEMRHRQTIKTSS 343
Query: 415 PTCVY-----ITHCGNFVLIGYSSGHVDRFNIQS-----GAHRGSYGHDNQPGHVGGVRG 464
+ I H FV I + ++ + I+ GA S D Q GH +R
Sbjct: 344 KVRFFSFGNDIKHWNKFV-ITLAGNSLEAYEIKEKEQGGGAFEVSSTLD-QAGHRSDIRS 401
Query: 465 VVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDF 524
+ + +Q+++S ++ +VKVW+ K +RSI D G+ ++ V
Sbjct: 402 LSLSSNDQMLVSTSSE-SVKVWNMKSLSC--IRSIACDYGLCTVFAPGNLHVI-VGTKTG 457
Query: 525 TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
T+ + ++ + + + H G + +PD R + + D ++ WD
Sbjct: 458 TIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWD 505
Score = 147 (56.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 49/193 (25%), Positives = 87/193 (45%)
Query: 386 KVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGA 445
++S+W K ++ L E K ++ T V ++ G + GYS G + +++
Sbjct: 38 RISIWDLRKQVLNQS-LYEEDIK----AEVTNVCLSKDGALLASGYSDGSIRIWSMSDYQ 92
Query: 446 HRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF-KQTGKPPLRSIKLDNG 504
+ + GH G V + + L I++SG D V VW ++G LR + +
Sbjct: 93 LQAVFN-----GHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHR--DQ 145
Query: 505 ISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
I+ + + S+ L D + I D +T I+ + GH + D +PD L + +
Sbjct: 146 ITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDETRLCSCTS 205
Query: 565 DCTIRVWDIPSSQ 577
D IR W IPS++
Sbjct: 206 DNQIRFWRIPSNE 218
Score = 140 (54.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 47/162 (29%), Positives = 74/162 (45%)
Query: 424 GNF-VLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482
GN V++G +G ++ F + S A S H G V +V + V SGG D+
Sbjct: 446 GNLHVIVGTKTGTIEVFELASAARVASI-----KAHEGSVWSLVLTPDLRGVTSGGADKL 500
Query: 483 VKVWHFK-----QTGKPPL------RSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531
VK W F+ + K + +++K+++ + + ++ LAV L D TV I
Sbjct: 501 VKFWDFELIASQENSKHKVLNLSLTKTLKVESDVLALKYSADNKFLAVSLLDNTVKIFYT 560
Query: 532 DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
DT L GH + D S DS +IT S D I++W +
Sbjct: 561 DTVKFHLSLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGL 602
Score = 94 (38.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 36/144 (25%), Positives = 66/144 (45%)
Query: 133 VKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNIL 192
+ +WD++ + L ++ D I + N C+ S ++ G S+ I + + +
Sbjct: 39 ISIWDLRKQVLNQSL-YEED---IKAEVTNVCL-----SKDGALLASGYSDGSIRIWS-M 88
Query: 193 TDESLME-FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVV 251
+D L F G VT ++F G ++VSGS + VW++ +++ HR +
Sbjct: 89 SDYQLQAVFNGHRGSVTTMTFNRLGN-ILVSGSKDTEVIVWDIITESGLFRLR-GHRDQI 146
Query: 252 TGAHFLYNEPLLVTSSPDNTLKLW 275
T L L+TSS D +K+W
Sbjct: 147 TSVKLLERSNHLITSSKDGFIKIW 170
Score = 59 (25.8 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 28/116 (24%), Positives = 48/116 (41%)
Query: 46 LFVTCVGKAFHVYGCNHFKLLSVSPQHED---DIT--CLSSDFFHIYTS-ANNIIYAWRR 99
L +T G+ ++ ++L+ S ED ++T CLS D + + ++ I W
Sbjct: 30 LAITGCGERISIWDLRK-QVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSM 88
Query: 100 G-IDIVGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDND 152
+ + GH V + G L+S +++ V VWDI E L D
Sbjct: 89 SDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRD 144
Score = 52 (23.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 19/98 (19%), Positives = 45/98 (45%)
Query: 54 AFHVYGCNHFKLLSVSPQHEDDITCLSSDFF-HIYTSANNI--IYAWRRGIDIV---GTY 107
+ ++ + ++L +V H +T ++ + +I S + + W DI+ G +
Sbjct: 82 SIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVW----DIITESGLF 137
Query: 108 K--GHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAE 141
+ GH + + L HLI+ ++ +K+WD + +
Sbjct: 138 RLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQ 175
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 136 (52.9 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 35/127 (27%), Positives = 64/127 (50%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRTHQESSM 516
H VR V Q +++ +D++VKVW ++ K L S+ + N + R + +
Sbjct: 101 HTASVRSVHFSRDGQRLVTASDDKSVKVWGVER--KKFLYSLNRHTNWVRCARFSPDGRL 158
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+A C DD TV + D + I + + G T DF+ + ++ D TI++WDI ++
Sbjct: 159 IASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTN 218
Query: 577 QLIDCFQ 583
+LI ++
Sbjct: 219 KLIQHYK 225
Score = 128 (50.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 33/126 (26%), Positives = 55/126 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH + GV +V S DQTV++W G+ + + + ++
Sbjct: 58 GHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTAS-VRSVHFSRDGQR 116
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
L DD +V + ++ + L+ H + A FSPD R + + D T+R+WD S
Sbjct: 117 LVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSH 176
Query: 577 QLIDCF 582
Q I+ F
Sbjct: 177 QCINIF 182
Score = 116 (45.9 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 33/114 (28%), Positives = 51/114 (44%)
Query: 460 GGVRGVVSDNLNQIVI-SGGNDQTVKVWHFKQTGKPPLRSIKLDN-GISFFRTHQESSML 517
GG V N + I S G D T+K+W + T K ++ K+ N G++ F H + L
Sbjct: 186 GGSATFVDFNSSGTCIASSGADNTIKIWDIR-TNKL-IQHYKVHNAGVNCFSFHPSGNYL 243
Query: 518 AVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
D T+ I+D+ +I L GH G + FS D + D + +W
Sbjct: 244 ISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 111 (44.1 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 35/152 (23%), Positives = 72/152 (47%)
Query: 177 IGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED 236
+ G +K +++ N+ F+ +T ++F G ++ S S + +W
Sbjct: 33 LATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGS-LVASSSRDQTVRLWTPSI 91
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
+ E+ + KAH V HF + LVT+S D ++K+W ++ + L H+
Sbjct: 92 KG-ESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERK----KFLYSLNRHT-- 144
Query: 297 PNYIQFYGNSSDN-ILSAAGDS-TLRIFNTKS 326
N+++ S D ++++ GD T+R+++T S
Sbjct: 145 -NWVRCARFSPDGRLIASCGDDRTVRLWDTSS 175
Score = 108 (43.1 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS--FFRTHQESS 515
H VR +++ S G+D+TV++W T +I D G S F + +
Sbjct: 143 HTNWVRCARFSPDGRLIASCGDDRTVRLW---DTSSHQCINIFTDYGGSATFVDFNSSGT 199
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+A D T+ I DI T +I+ H + F P +LI+ S D TI++ D+
Sbjct: 200 CIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLE 259
Query: 576 SQLI 579
+LI
Sbjct: 260 GRLI 263
Score = 78 (32.5 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 29/99 (29%), Positives = 48/99 (48%)
Query: 234 LEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW-IFDKADGNGRLLRIREG 292
+ED +E K H+ V++ A F N L T S D +L +W + KA R R G
Sbjct: 5 MEDPTLERHFK-GHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKA----RAFRF-VG 58
Query: 293 HSAPPNYIQFYGNSSDNILSAAGDSTLRIF--NTKSETS 329
H+ + F S + S++ D T+R++ + K E++
Sbjct: 59 HTDVITGVNF-APSGSLVASSSRDQTVRLWTPSIKGEST 96
Score = 55 (24.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 23/102 (22%), Positives = 37/102 (36%)
Query: 385 NKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSG 444
N + +W +K+ + V + C GN+++ G S + ++ G
Sbjct: 208 NTIKIWDIRTNKLIQHYKV-------HNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEG 260
Query: 445 AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
R Y GH G V V + SGG D V +W
Sbjct: 261 --RLIY---TLHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 119 (46.9 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 30/113 (26%), Positives = 54/113 (47%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS-FFRTHQESSMLAVCLDDFTVNIID 530
++++S D+T+K+W T K + + G + F + + +A D TV I D
Sbjct: 157 RLIVSCSEDKTIKIWD--TTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWD 214
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
I +++ H G + F P ++ITAS D T+++ D+ +LI Q
Sbjct: 215 IRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQ 267
Score = 119 (46.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 29/127 (22%), Positives = 59/127 (46%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWH-FKQTGKPPLRSIKLDNGISFFRTHQESSM 516
H VR V Q + + D+++KVW+ ++Q L + + + + + +
Sbjct: 101 HTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSL--YRHTHWVRCAKFSPDGRL 158
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ C +D T+ I D + S +G DF+P+ + +A D T+++WDI +
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVN 218
Query: 577 QLIDCFQ 583
+L+ +Q
Sbjct: 219 KLLQHYQ 225
Score = 107 (42.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 31/117 (26%), Positives = 57/117 (48%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+T++ F G + + +T L +WN + Q H+ VVT F LL ++
Sbjct: 21 ITSVDFSPSGKQLATASWDT-FLMLWNCKP-QARAFRYVGHKDVVTSVQFSPLGNLLASA 78
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
S D T++LWI DK G+ + H+AP + F + + +A+ D +++++N
Sbjct: 79 SRDRTVRLWIPDK---RGKSSEFK-AHTAPVRSVDFSADGQF-LATASEDKSIKVWN 130
Score = 98 (39.6 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 29/113 (25%), Positives = 48/113 (42%)
Query: 461 GVRGVVSDNLNQIVI-SGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLA 518
G V N N I S G+D TVK+W + K L+ ++ +G ++ H + +
Sbjct: 187 GFANFVDFNPNGTCIASAGSDHTVKIWDIR-VNKL-LQHYQVHSGGVNCVSFHPSGNYII 244
Query: 519 VCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
D T+ I+D+ +I L GH G + FS + D + +W
Sbjct: 245 TASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
Score = 80 (33.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 31/128 (24%), Positives = 61/128 (47%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
VT++ F G ++ S S + +W + D++ ++ KAH V F + L T+
Sbjct: 63 VTSVQFSPLGN-LLASASRDRTVRLW-IPDKRGKSSEFKAHTAPVRSVDFSADGQFLATA 120
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDSTLRIFNT 324
S D ++K+W + R L H+ ++++ S D I+S + D T++I++T
Sbjct: 121 SEDKSIKVWNMYRQ----RFLYSLYRHT---HWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 325 KSETSNKN 332
++ N
Sbjct: 174 TNKQCVNN 181
Score = 69 (29.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 27/89 (30%), Positives = 39/89 (43%)
Query: 235 EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS 294
ED +E K H+ +T F + L T+S D L LW R R GH
Sbjct: 6 EDPVLERYFK-GHKAAITSVDFSPSGKQLATASWDTFLMLW---NCKPQARAFRY-VGHK 60
Query: 295 APPNYIQFYGNSSDNIL-SAAGDSTLRIF 322
+QF + N+L SA+ D T+R++
Sbjct: 61 DVVTSVQF--SPLGNLLASASRDRTVRLW 87
Score = 62 (26.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 31/125 (24%), Positives = 47/125 (37%)
Query: 365 SFGLAREKDWN-NIAAIHTG--KNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYIT 421
S G A D+N N I + + V +W +K+ + Q CV
Sbjct: 185 SVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHY-------QVHSGGVNCVSFH 237
Query: 422 HCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ 481
GN+++ S G + ++ G R Y GH G V V ++ SGG D
Sbjct: 238 PSGNYIITASSDGTLKILDLLEG--RLIY---TLQGHTGPVFTVSFSKGGELFSSGGADT 292
Query: 482 TVKVW 486
V +W
Sbjct: 293 QVLLW 297
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 117 (46.2 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 29/105 (27%), Positives = 53/105 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG +D T+ +W + KP R I+ +S ++A D ++ + D T
Sbjct: 295 LVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 354
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ L GH+ + +S DSR L++ S D T++VWD+ + +L
Sbjct: 355 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKL 399
Score = 113 (44.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 33/117 (28%), Positives = 63/117 (53%)
Query: 213 RTDGPPMMVSGSNTGHLTVWN-LEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271
R GP +VSGS+ L +W+ ED++ ++ H+ ++ F + ++ ++S D +
Sbjct: 288 RGQGPERLVSGSDDFTLFMWSPAEDKKPLARMT-GHQALINQVLFSPDSRIIASASFDKS 346
Query: 272 LKLWIFDKADGN-GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
+KLW DG G+ L GH A I + +S ++S + DSTL++++ K++
Sbjct: 347 IKLW-----DGRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDVKAQ 397
Score = 105 (42.0 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 52/196 (26%), Positives = 85/196 (43%)
Query: 108 KGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKR-WNSC 164
+GH+ V + P G +L S ++ V+ WD+ E + F G R W
Sbjct: 62 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPH---------FTCQGHRHW--- 109
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI---QTWGPVTALSFRT--DGPPM 219
V + SP + G N +I+L + T + + + W +T LS+ P
Sbjct: 110 VLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKW--ITGLSWEPLHANPEC 167
Query: 220 --MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIF 277
M S S G + VW+ + E +I H + VT + + LL ++S D T+K+W
Sbjct: 168 RYMASSSKDGSVRVWDTTAGRCE-RILTGHTQSVTCLRW-GGDGLLYSASQDRTIKVW-- 223
Query: 278 DKADGNGRLLRIREGH 293
+A +G L R +GH
Sbjct: 224 -RAH-DGVLCRTLQGH 237
Score = 101 (40.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 28/116 (24%), Positives = 55/116 (47%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF-FRTHQESS 515
GH + V+ ++I+ S D+++K+W + TGK L S++ + +S
Sbjct: 321 GHQALINQVLFSPDSRIIASASFDKSIKLWDGR-TGKY-LASLRGHVAAVYQIAWSADSR 378
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+L D T+ + D+ + L GH ++ D+SPD + + + D +R+W
Sbjct: 379 LLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 98 (39.6 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 32/122 (26%), Positives = 61/122 (50%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF--LYNEP--- 261
V ++S+ DG + SG G + +W+ + ++ H K +TG + L+ P
Sbjct: 110 VLSISWSPDGKTL-ASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECR 168
Query: 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL-SAAGDSTLR 320
+ +SS D ++++W D G R RI GH+ +++ G D +L SA+ D T++
Sbjct: 169 YMASSSKDGSVRVW--DTTAG--RCERILTGHTQSVTCLRWGG---DGLLYSASQDRTIK 221
Query: 321 IF 322
++
Sbjct: 222 VW 223
Score = 56 (24.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
PGH V V Q V SGG D+ +++W
Sbjct: 404 PGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 51 (23.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328
EGHS + F + + S +GD+T+R ++ +ET
Sbjct: 62 EGHSEAVISVAF-SPTGKYLASGSGDTTVRFWDLSTET 98
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 131 (51.2 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 70/282 (24%), Positives = 112/282 (39%)
Query: 65 LLSVSPQHEDDITC--LSSDFFHIYTSANNI-IYAWRRGIDI-VGTYKGHTSPVHLIL-- 118
L+ H DD+ C SS + I IY+ ++ KGHT VH
Sbjct: 4 LIHTLTDHSDDVNCCAFSSSCLATCSLDKTIRIYSLNDFTELPYSPLKGHTYAVHCCCFS 63
Query: 119 PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIG 178
P G L S + +WD D ++ + S V V SP +
Sbjct: 64 PSGHTLASCSTDGATIIWDTS----------DGRMLAVLEQPTGSPVRVCRFSPESTYLV 113
Query: 179 VGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238
G ++ ++L N+ + + G + A +F + G V+GS+ G LTVW+ + R
Sbjct: 114 SGAADGSVVLWNVHSMKFYRSGNVKDGSLVACAF-SPGGNFFVTGSSCGDLTVWDDKMRC 172
Query: 239 VENQIKKAHRKVVTGAHFLYNEPL-----------LVTSSPDNTLKLWIFDKADGNGRLL 287
+ N+ KAH VT + + P+ + + DN +K+W AD G L
Sbjct: 173 LCNE--KAHDLGVTCCD-ISSHPVSDGEHASGCFQMASCGQDNKIKVWFILFADFLGGEL 229
Query: 288 RIR---EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
R + GHSAP F ++S + D + I+ T +
Sbjct: 230 RYKCTLSGHSAPVLTCAF-SYDGQMLVSGSVDKCVIIYETNT 270
Score = 91 (37.1 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+ ML D V I + +T I+ LS H +T F+P S +L T SMD T+ +W
Sbjct: 250 DGQMLVSGSVDKCVIIYETNTGNILHTLSQHTRYVTTCAFAPCSLFLATGSMDKTVHIWK 309
Query: 573 IPSSQ 577
+ + Q
Sbjct: 310 LDNKQ 314
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 124 (48.7 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 55/163 (33%), Positives = 79/163 (48%)
Query: 172 PVVDIIGVGLSNKKIILHNILTDESLMEFIQTWG--PVTALSFRTDGPPMMVSGSNTGHL 229
PV +I+ LS K I H L LM Q G P+ + F +G SGS G +
Sbjct: 144 PVPEIV---LSGKSSIEH--LQKAELMGS-QIGGERPIAIVRFSNNGNHF-ASGSWGGQV 196
Query: 230 TVWNLEDRQVENQIKKAHRKVVTGAHFLY--------NEPL-LVTSSPDNTLKLWIFDKA 280
VWN D E Q+ + H V+G + +E L L T + DNT+ LW KA
Sbjct: 197 KVWN-SDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLW---KA 252
Query: 281 DGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
+ LLR+ EGH A + F+ S D ++SA+ D+T R+++
Sbjct: 253 SQSTPLLRL-EGHLARVGRVAFHP-SGDYLVSASFDTTWRLWD 293
Score = 98 (39.6 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 30/127 (23%), Positives = 55/127 (43%)
Query: 455 QPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQES 514
Q GH G+ + +V SGGND ++W + +GK + + I
Sbjct: 303 QEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLR-SGKSIMVLDEHIRQIVAMAWSPNG 361
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADF--SPDSRWLITASMDCTIRVWD 572
LA D TV I D+ ++ + H ++D + S +R++ T+ D +++W+
Sbjct: 362 YQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWN 421
Query: 573 IPSSQLI 579
+ LI
Sbjct: 422 PLNCSLI 428
Score = 70 (29.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 26/108 (24%), Positives = 49/108 (45%)
Query: 467 SDNLNQIVISGGNDQTVKVWHFKQTGKP---PLRSIKLDNGISFFRTHQESSMLAVCLDD 523
S N Q+ S +D TVK+W ++ P S L + + + + + +A D
Sbjct: 358 SPNGYQLATSSADD-TVKIWDLRKVSLAHTIPAHS-SLVSDVRYIESGV-NRFIATSGYD 414
Query: 524 FTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
V + + C++I+ + GH ++ D D I++ D TI++W
Sbjct: 415 GCVKLWNPLNCSLIKSMVGHEEKVMSVDGYGDR--FISSGYDRTIKLW 460
Score = 51 (23.0 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 459 VGGVRGVVS-DNLNQIVISGGNDQTVKVWH 487
VG V+S D IS G D+T+K+W+
Sbjct: 432 VGHEEKVMSVDGYGDRFISSGYDRTIKLWY 461
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 38/127 (29%), Positives = 61/127 (48%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHF-KQTGKPPLRSIKLDNGISFFRTHQESSM 516
H G VR V Q +++ +DQ++K+W +Q LR + +N + R + +
Sbjct: 101 HTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLR--EHNNWVRCARFSPDGQL 158
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ DD TV + D + +I G + DF P S + TAS D T+RVWDI +
Sbjct: 159 MVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTH 218
Query: 577 QLIDCFQ 583
L+ +Q
Sbjct: 219 TLLQHYQ 225
Score = 135 (52.6 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 53/236 (22%), Positives = 112/236 (47%)
Query: 107 YKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSC 164
+KGH + + P G + S +++V VW++K + ++ G +
Sbjct: 14 FKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSR---------AYRFTGHK--DA 62
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILH-NILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG 223
V ++ SP ++ +K + L + ES++ T G V ++ F DG ++ +
Sbjct: 63 VTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHT-GSVRSVCFSADGQSLLTA- 120
Query: 224 SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN 283
S+ + +W++ +++ +++ H V A F + L+V+ S D T+KLW D +
Sbjct: 121 SDDQSIKLWSVHRQKIICTLRE-HNNWVRCARFSPDGQLMVSVSDDRTVKLW-----DAS 174
Query: 284 GR-LLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
R L+ +Y+ F+ SS I +A+ D+T+R+++ ++ T ++ + SA
Sbjct: 175 SRQLIHTFCEPGGYSSYVDFHP-SSTCIATASSDNTVRVWDIRTHTLLQHYQVHSA 229
Score = 127 (49.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS-FFRTHQESSMLAVCLDDFTVNIID 530
Q+++S +D+TVK+W + + + + G S + H S+ +A D TV + D
Sbjct: 157 QLMVSVSDDRTVKLWD--ASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWD 214
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
I T T+++ H + F P L+TAS D T+++ D+ +L+
Sbjct: 215 IRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLL 263
Score = 84 (34.6 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 22/99 (22%), Positives = 42/99 (42%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNIIDID 532
+ + +D TV+VW + L+ ++ + ++ H + L D T+ I+D+
Sbjct: 201 IATASSDNTVRVWDIRT--HTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLL 258
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
++ L GH G + FS +A D + VW
Sbjct: 259 EGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 46 (21.3 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 11/30 (36%), Positives = 12/30 (40%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
GH G V S G+DQ V VW
Sbjct: 268 GHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 116 (45.9 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 30/113 (26%), Positives = 54/113 (47%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQES-SMLAVCLDDFTVNIID 530
++++S D+T+K+W T K + + G + F S + +A D TV + D
Sbjct: 157 RLIVSCSEDKTIKIWD--TTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWD 214
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
+ +++ H G + F P +LITAS D T+++ D+ +LI Q
Sbjct: 215 VRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ 267
Score = 116 (45.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 29/127 (22%), Positives = 57/127 (44%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWH-FKQTGKPPLRSIKLDNGISFFRTHQESSM 516
H VR V Q + + D+++KVW ++Q L + + + + + +
Sbjct: 101 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSL--YRHTHWVRCAKFSPDGRL 158
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ C +D T+ I D + S +G DF+P + +A D T++VWD+ +
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 218
Query: 577 QLIDCFQ 583
+L+ +Q
Sbjct: 219 KLLQHYQ 225
Score = 105 (42.0 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 29/117 (24%), Positives = 58/117 (49%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+T+L +G + + +T L +WN + + H+ VVT F + LL ++
Sbjct: 21 ITSLDLSPNGKQLATASWDT-FLMLWNFKPHARAYRYV-GHKDVVTSVQFSPHGNLLASA 78
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
S D T++LWI DK G+ + H+AP + F + + +A+ D ++++++
Sbjct: 79 SRDRTVRLWIPDK---RGKFSEFK-AHTAPVRSVDFSADGQF-LATASEDKSIKVWS 130
Score = 105 (42.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNIIDID 532
+ S G+DQTVKVW + K L+ ++ +G ++ H + L D T+ I+D+
Sbjct: 201 IASAGSDQTVKVWDVR-VNKL-LQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLL 258
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+I L GH G + FS + D + +W
Sbjct: 259 EGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 80 (33.2 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 31/128 (24%), Positives = 60/128 (46%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
VT++ F G ++ S S + +W + D++ + KAH V F + L T+
Sbjct: 63 VTSVQFSPHGN-LLASASRDRTVRLW-IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATA 120
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDSTLRIFNT 324
S D ++K+W + R L H+ ++++ S D I+S + D T++I++T
Sbjct: 121 SEDKSIKVWSMYRQ----RFLYSLYRHT---HWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 325 KSETSNKN 332
++ N
Sbjct: 174 TNKQCVNN 181
Score = 72 (30.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 28/89 (31%), Positives = 40/89 (44%)
Query: 235 EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS 294
ED +E K H+ +T N L T+S D L LW F + R R GH
Sbjct: 6 EDPVLERYFK-GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKP---HARAYRY-VGHK 60
Query: 295 APPNYIQFYGNSSDNIL-SAAGDSTLRIF 322
+QF + N+L SA+ D T+R++
Sbjct: 61 DVVTSVQF--SPHGNLLASASRDRTVRLW 87
Score = 58 (25.5 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 19/70 (27%), Positives = 29/70 (41%)
Query: 417 CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476
C+ GN+++ S G + ++ G R Y GH G V V ++ S
Sbjct: 233 CISFHPSGNYLITASSDGTLKILDLLEG--RLIY---TLQGHTGPVFTVSFSKGGELFAS 287
Query: 477 GGNDQTVKVW 486
GG D V +W
Sbjct: 288 GGADTQVLLW 297
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 116 (45.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 29/127 (22%), Positives = 57/127 (44%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWH-FKQTGKPPLRSIKLDNGISFFRTHQESSM 516
H VR V Q + + D+++KVW ++Q L + + + + + +
Sbjct: 101 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSL--YRHTHWVRCAKFSPDGRL 158
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ C +D T+ I D + S +G DF+P + +A D T++VWD+ +
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 218
Query: 577 QLIDCFQ 583
+L+ +Q
Sbjct: 219 KLLQHYQ 225
Score = 115 (45.5 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 29/113 (25%), Positives = 54/113 (47%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQES-SMLAVCLDDFTVNIID 530
++++S D+T+K+W T K + + G + F S + +A D TV + D
Sbjct: 157 RLIVSCSEDKTIKIWD--TTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWD 214
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
+ +++ H G + F P +L+TAS D T+++ D+ +LI Q
Sbjct: 215 VRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQ 267
Score = 106 (42.4 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNIIDID 532
+ S G+DQTVKVW + K L+ ++ +G ++ H + L D T+ I+D+
Sbjct: 201 IASAGSDQTVKVWDVR-VNKL-LQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLL 258
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+I L GH G + FS + D + +W
Sbjct: 259 EGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 105 (42.0 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 29/117 (24%), Positives = 58/117 (49%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+T+L +G + + +T L +WN + + H+ VVT F + LL ++
Sbjct: 21 ITSLDLSPNGKQLATASWDT-FLMLWNFKPHARAYRYV-GHKDVVTSVQFSPHGNLLASA 78
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
S D T++LWI DK G+ + H+AP + F + + +A+ D ++++++
Sbjct: 79 SRDRTVRLWIPDK---RGKFSEFK-AHTAPVRSVDFSADGQF-LATASEDKSIKVWS 130
Score = 80 (33.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 31/128 (24%), Positives = 60/128 (46%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
VT++ F G ++ S S + +W + D++ + KAH V F + L T+
Sbjct: 63 VTSVQFSPHGN-LLASASRDRTVRLW-IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATA 120
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDSTLRIFNT 324
S D ++K+W + R L H+ ++++ S D I+S + D T++I++T
Sbjct: 121 SEDKSIKVWSMYRQ----RFLYSLYRHT---HWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 325 KSETSNKN 332
++ N
Sbjct: 174 TNKQCVNN 181
Score = 72 (30.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 28/89 (31%), Positives = 40/89 (44%)
Query: 235 EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS 294
ED +E K H+ +T N L T+S D L LW F + R R GH
Sbjct: 6 EDPVLERYFK-GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKP---HARAYRY-VGHK 60
Query: 295 APPNYIQFYGNSSDNIL-SAAGDSTLRIF 322
+QF + N+L SA+ D T+R++
Sbjct: 61 DVVTSVQF--SPHGNLLASASRDRTVRLW 87
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 116 (45.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 27/113 (23%), Positives = 58/113 (51%)
Query: 466 VSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFT 525
+++ + + ++S +D T+ +W + + KP R + ++ + + +A D
Sbjct: 369 INNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNH 428
Query: 526 VNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
V + + I L GH+G + FS DSR L+++S D T++VW++ + +L
Sbjct: 429 VKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKL 481
Score = 105 (42.0 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 36/131 (27%), Positives = 58/131 (44%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+ A SF MVSGS +W+ D K H V + N ++ T
Sbjct: 151 ILATSFSPVSSSTMVSGSGDSTARIWDC-DTGTPLHTLKGHTSWVLAVSYSPNGAMIATG 209
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGH-------SAPPNYIQFYGNSSDNILSAAGDSTL 319
S DNT+++W K G L+ GH + P ++Q G+ + SA+ DST+
Sbjct: 210 SMDNTVRIWDAKKGQALGAPLK---GHVKWITSLAWEPYHLQQSGHP--RLASASKDSTV 264
Query: 320 RIFNTKSETSN 330
RI++ S+ ++
Sbjct: 265 RIWDVISKRAD 275
Score = 91 (37.1 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 451 GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRT 510
GH + HV S ++ I S G D VK+W+ + GK + +++ G +
Sbjct: 403 GHQKEVNHV-----TFSPDMAYIA-SAGFDNHVKLWNGRD-GKF-ITTLRGHVGAVYQCC 454
Query: 511 HQESSMLAVCLD-DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIR 569
S L V D T+ + ++ T + L GH ++ D+SPD + + + D IR
Sbjct: 455 FSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIR 514
Query: 570 VW 571
+W
Sbjct: 515 IW 516
Score = 71 (30.1 bits), Expect = 6.1e-08, Sum P(3) = 6.1e-08
Identities = 26/111 (23%), Positives = 47/111 (42%)
Query: 204 WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLL 263
W P + G P + S S + +W++ ++ + + H+ VT + +
Sbjct: 242 WEPY---HLQQSGHPRLASASKDSTVRIWDVISKRADI-VLSGHKGSVTCVRW-GGTGKI 296
Query: 264 VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA 314
TSS D T+K+W G L++ H+ N++ S+D IL A
Sbjct: 297 YTSSHDRTIKVW----NSQTGTLIQTLSAHAHRVNHLAL---STDFILRTA 340
Score = 70 (29.7 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 89 SANNIIYAW--RRGIDIVGTYKGH----TS----PVHLILPFGPHLISVDEESNVKVWDI 138
S +N + W ++G + KGH TS P HL P L S ++S V++WD+
Sbjct: 210 SMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDV 269
Query: 139 KAEETYLELS 148
++ + LS
Sbjct: 270 ISKRADIVLS 279
Score = 57 (25.1 bits), Expect = 6.1e-08, Sum P(3) = 6.1e-08
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 106 TYKGHTSPVHLILPFGPH--LISVDEESN-VKVWDIK 139
T KGHTS V L + + P+ +I+ N V++WD K
Sbjct: 186 TLKGHTSWV-LAVSYSPNGAMIATGSMDNTVRIWDAK 221
Score = 50 (22.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 292 GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328
GH F SS ++S +GDST RI++ + T
Sbjct: 146 GHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGT 182
>WB|WBGene00017435 [details] [associations]
symbol:F13H8.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:FO080709 RefSeq:NP_495256.1
ProteinModelPortal:Q19433 SMR:Q19433 DIP:DIP-25827N
MINT:MINT-1128581 STRING:Q19433 PaxDb:Q19433 EnsemblMetazoa:F13H8.2
GeneID:174038 KEGG:cel:CELE_F13H8.2 UCSC:F13H8.2 CTD:174038
WormBase:F13H8.2 InParanoid:Q19433 NextBio:882237 Uniprot:Q19433
Length = 929
Score = 117 (46.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 43/199 (21%), Positives = 81/199 (40%)
Query: 383 GKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQ 442
G N+V +WS + S + L K V N++L G +G + F +
Sbjct: 428 GGNEVIVWSTH-SLRSSLTLTDNDIKDI-----VAVNFVPGDNYILTGGKNGEIGVFELS 481
Query: 443 SGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF--------KQTGKP 494
S + + H G + + + N+ I+ D+TV+ W F K+
Sbjct: 482 SAELV-----ETRKAHTGAIWTIQNSPDNEGFITASADKTVRFWSFVLVTEGSRKRISIK 536
Query: 495 PLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSP 554
+ ++L + + L V L + T ++ ++T L GH +T D +P
Sbjct: 537 EQKVLELPDEALAASFSADGKFLVVALLNNTCSVYFVNTLKFFVSLYGHSLPVTCVDIAP 596
Query: 555 DSRWLITASMDCTIRVWDI 573
S+ +T S+D +++VW +
Sbjct: 597 SSKLCVTGSVDKSVKVWGL 615
Score = 110 (43.8 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 33/147 (22%), Positives = 66/147 (44%)
Query: 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN 241
+N+ + +N+ T E + E I++ P++ + + + P++ G G + ++N E+ E
Sbjct: 38 ANEYLNFYNMRTAEKVNEIIESTKPISCVR-QCENKPLLAIGYADGSVKLFNQENEDSEP 96
Query: 242 QIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQ 301
+ H+K V F + L T D + LW G RL GH ++
Sbjct: 97 IMFSGHKKAVNCIEFSSDGLLFATGGKDGVIVLWDILAERGMFRL----HGHKESVTQMK 152
Query: 302 FYGNSSDNILSAAGDSTLRIFNTKSET 328
F I+S + DS ++ ++ S++
Sbjct: 153 FV-RGDRFIISTSKDSLIKFWSIASQS 178
Score = 88 (36.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 28/126 (22%), Positives = 56/126 (44%)
Query: 449 SYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW--HFKQTGKPPL-RSIKLDNGI 505
S G+ ++ GH VR + + + ++ SGG ++ + VW H ++ IK +
Sbjct: 399 SVGNLDKLGHREDVRALCVSSSSSLLASGGGNEVI-VWSTHSLRSSLTLTDNDIKDIVAV 457
Query: 506 SFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMD 565
+F + + + + + ++ + ++ H G + SPD+ ITAS D
Sbjct: 458 NFV---PGDNYILTGGKNGEIGVFELSSAELVETRKAHTGAIWTIQNSPDNEGFITASAD 514
Query: 566 CTIRVW 571
T+R W
Sbjct: 515 KTVRFW 520
Score = 63 (27.2 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 31/150 (20%), Positives = 63/150 (42%)
Query: 150 DNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTA 209
+ D+ IM VN +E S + G + I+L +IL + + VT
Sbjct: 91 NEDSEPIMFSGHKKAVNCIEFSSDGLLFATGGKDGVIVLWDILAERGMFRLHGHKESVTQ 150
Query: 210 LSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVT-GAHFLYNEPLLVTSSP 268
+ F G ++S S + W++ + + + ++ + H +E +LV ++
Sbjct: 151 MKF-VRGDRFIISTSKDSLIKFWSIASQSCFYTVMDSRNEIYSMSLH--RDETVLVAATA 207
Query: 269 DNTLKLWIFDKADGNGRLLRIREGHSAPPN 298
+ L+L +F+ NG + +E S P+
Sbjct: 208 E--LELLVFELNWKNGAIFE-QEVKSEEPS 234
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 128 (50.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 31/123 (25%), Positives = 59/123 (47%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSM 516
H+ VR ++++S +D+TVK+W +T + + S G +++ H +
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWD--KTSRECVHSYCEHGGFVTYVDFHPSGTC 201
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+A D TV + D T +++ H + F P +LITAS D T+++ D+
Sbjct: 202 IAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEG 261
Query: 577 QLI 579
+L+
Sbjct: 262 RLL 264
Score = 127 (49.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESSM 516
H VR V + Q++++ +D+TVKVW + + L S+ N + + + +
Sbjct: 102 HTATVRSVHFCSDGQLLVTASDDKTVKVWSTHR--QRFLFSLTQHINWVRCAKFSPDGRL 159
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ DD TV + D + + H G +T DF P + A MD T++VWD +
Sbjct: 160 IVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTH 219
Query: 577 QLIDCFQ 583
+L+ +Q
Sbjct: 220 RLVQHYQ 226
Score = 125 (49.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 63/265 (23%), Positives = 109/265 (41%)
Query: 72 HEDDITCLS-SDFFHIYTSANN--IIYAWRRGIDIVGT-YKGHTSPVHLILPFGPHLISV 127
H+D +TC++ S H+ S + + W + T ++ HT+ V + H S
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV-----HFCS- 113
Query: 128 DEESNVKVWD---IKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNK 184
D + V D +K T+ + + T I W C SP +I +K
Sbjct: 114 DGQLLVTASDDKTVKVWSTHRQRFLFSLTQHI---NWVRCAKF---SPDGRLIVSASDDK 167
Query: 185 KIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG-SNTGHLTVWNLEDRQVENQI 243
+ L + + E + + + G VT + F G + +G NT + VW+ ++ Q
Sbjct: 168 TVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNT--VKVWDTRTHRLV-QH 224
Query: 244 KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFY 303
+ H V F + L+T+S D+TLK I D +G RLL GH P + F
Sbjct: 225 YQLHSAAVNALSFHPSGNYLITASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAF- 279
Query: 304 GNSSDNILSAAGDSTLRIFNTKSET 328
+ + S D + ++ + +T
Sbjct: 280 SRTGEYFASGGSDEQVMVWKSNFDT 304
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH V V ++ SG D+TV++W G+ + + + +
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTAT-VRSVHFCSDGQL 117
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
L DD TV + + L+ H+ + A FSPD R +++AS D T+++WD S
Sbjct: 118 LVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR 177
Query: 577 QLIDCF 582
+ + +
Sbjct: 178 ECVHSY 183
Score = 103 (41.3 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 44/179 (24%), Positives = 89/179 (49%)
Query: 163 SCVNVLEPSPVVDIIGVGLSNK--KIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMM 220
+CVN SP ++ G +K +I + N+ + ++ F V ++ F +DG ++
Sbjct: 65 TCVNF---SPSGHLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQ-LL 118
Query: 221 VSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA 280
V+ S+ + VW+ ++ + + H V A F + L+V++S D T+KLW DK
Sbjct: 119 VTASDDKTVKVWSTHRQRFLFSLTQ-HINWVRCAKFSPDGRLIVSASDDKTVKLW--DKT 175
Query: 281 DGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFNTKSETSNKNLGIASA 338
+ + H Y+ F+ S ++AAG D+T+++++T++ ++ + SA
Sbjct: 176 --SRECVHSYCEHGGFVTYVDFH--PSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSA 230
Score = 97 (39.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 28/101 (27%), Positives = 42/101 (41%)
Query: 474 VISGGNDQTVKVWHFKQ---TGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
+ + G D TVKVW + L S + N +SF H + L D T+ I+D
Sbjct: 202 IAAAGMDNTVKVWDTRTHRLVQHYQLHSAAV-NALSF---HPSGNYLITASSDSTLKILD 257
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ ++ L GH G T FS + + D + VW
Sbjct: 258 LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 95 (38.5 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 42/174 (24%), Positives = 78/174 (44%)
Query: 107 YKGHTSPVHLILPFG---PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS 163
+KGH V + F HL S +S + +W +K + + D +
Sbjct: 15 FKGHRDAVTCV-DFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAV--------T 65
Query: 164 CVNVLEPSPVVDIIGVGLSNK--KIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
CVN SP ++ G +K +I + N+ + ++ F V ++ F +DG ++V
Sbjct: 66 CVNF---SPSGHLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQ-LLV 119
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
+ S+ + VW+ ++ + + H V A F + L+V++S D T+KLW
Sbjct: 120 TASDDKTVKVWSTHRQRFLFSLTQ-HINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Score = 85 (35.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 31/98 (31%), Positives = 44/98 (44%)
Query: 235 EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS 294
ED +E K HR VT F N L + S D+TL +W R R GH
Sbjct: 7 EDPSLERHFK-GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKP---QSRAYRFT-GHK 61
Query: 295 APPNYIQFYGNSSDNIL-SAAGDSTLRIF--NTKSETS 329
+ F + S ++L S + D T+RI+ N K E++
Sbjct: 62 DAVTCVNF--SPSGHLLASGSRDKTVRIWVPNVKGEST 97
Score = 56 (24.8 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 424 GNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTV 483
GN+++ S + ++ G R Y GH G V + SGG+D+ V
Sbjct: 241 GNYLITASSDSTLKILDLMEG--RLLY---TLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Query: 484 KVW 486
VW
Sbjct: 296 MVW 298
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 135 (52.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESSM 516
H VR V + Q +++ +D+TVKVW + + L S+ N + R + +
Sbjct: 102 HTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR--QKFLFSLSQHINWVRCARFSPDGRL 159
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ DD TV + D + + H G +T DF P + ASMD T++VWD+ +
Sbjct: 160 IVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTH 219
Query: 577 QLIDCFQ 583
+L+ +Q
Sbjct: 220 RLLQHYQ 226
Score = 130 (50.8 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 30/123 (24%), Positives = 60/123 (48%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSM 516
H+ VR ++++S +D+TVK+W +T + + S G +++ H +
Sbjct: 144 HINWVRCARFSPDGRLIVSASDDKTVKLWD--KTSRECVHSYCEHGGFVTYVDFHPSGTC 201
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+A D TV + D+ T +++ H + F P +L+TAS D T+++ D+
Sbjct: 202 IAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEG 261
Query: 577 QLI 579
+L+
Sbjct: 262 RLL 264
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 59/257 (22%), Positives = 105/257 (40%)
Query: 72 HEDDITCLS-SDFFHIYTSANN--IIYAWRRGIDIVGT-YKGHTSPVHLILPFGPHLISV 127
H+D +TC++ S H+ S + + W + T ++ HT+ V + H S
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSV-----HFCS- 113
Query: 128 DEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKII 187
D +S V D K + + S F + + V SP +I +K +
Sbjct: 114 DGQSLVTASDDKTVKVW---STHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVK 170
Query: 188 LHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAH 247
L + + E + + + G VT + F G + + S + VW++ ++ Q + H
Sbjct: 171 LWDKTSRECVHSYCEHGGFVTYVDFHPSGT-CIAAASMDNTVKVWDVRTHRLL-QHYQLH 228
Query: 248 RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSS 307
V F + L+T+S D+TLK I D +G RLL GH P + F +
Sbjct: 229 SAAVNALSFHPSGNYLLTASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAF-SRTG 283
Query: 308 DNILSAAGDSTLRIFNT 324
+ S D + ++ +
Sbjct: 284 EYFASGGSDEQVMVWKS 300
Score = 119 (46.9 bits), Expect = 0.00053, P = 0.00053
Identities = 32/126 (25%), Positives = 54/126 (42%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH V V ++ SG D+TV++W G+ + + +
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTAT-VRSVHFCSDGQS 117
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
L DD TV + + LS H+ + A FSPD R +++AS D T+++WD S
Sbjct: 118 LVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSR 177
Query: 577 QLIDCF 582
+ + +
Sbjct: 178 ECVHSY 183
Score = 103 (41.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 33/122 (27%), Positives = 61/122 (50%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
VT ++F G ++ SGS + +W + + + E+ + +AH V HF + LVT+
Sbjct: 64 VTCVNFSPSGH-LLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQSLVTA 121
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDSTLRIFNT 324
S D T+K+W + + L H N+++ S D I+SA+ D T+++++
Sbjct: 122 SDDKTVKVWSTHRQ----KFLFSLSQHI---NWVRCARFSPDGRLIVSASDDKTVKLWDK 174
Query: 325 KS 326
S
Sbjct: 175 TS 176
Score = 92 (37.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNIIDID 532
+ + D TVKVW + T + L+ +L + ++ H + L D T+ I+D+
Sbjct: 202 IAAASMDNTVKVWDVR-THRL-LQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLM 259
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
++ L GH G T FS + + D + VW
Sbjct: 260 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 81 (33.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 29/98 (29%), Positives = 43/98 (43%)
Query: 235 EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS 294
ED +E K HR +T F N L + S D+ L +W R R GH
Sbjct: 7 EDPSLERHFK-GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKP---QSRAYRFA-GHK 61
Query: 295 APPNYIQFYGNSSDNIL-SAAGDSTLRIF--NTKSETS 329
+ F + S ++L S + D T+RI+ N K E++
Sbjct: 62 DAVTCVNF--SPSGHLLASGSRDKTVRIWIPNVKGEST 97
Score = 58 (25.5 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 18/63 (28%), Positives = 26/63 (41%)
Query: 424 GNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTV 483
GN++L S + ++ G R Y GH G V + SGG+D+ V
Sbjct: 241 GNYLLTASSDSTLKILDLMEG--RLLY---TLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Query: 484 KVW 486
VW
Sbjct: 296 MVW 298
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 117 (46.2 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 29/105 (27%), Positives = 53/105 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG +D T+ +W + KP R I+ +S ++A D ++ + D T
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 403
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ L GH+ + +S DSR L++ S D T++VWD+ + +L
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKL 448
Score = 102 (41.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 52/196 (26%), Positives = 86/196 (43%)
Query: 108 KGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKR-WNSC 164
+GH+ V + P G +L S ++ V+ WD+ E + F G R W
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPH---------FTCQGHRHW--- 158
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI---QTWGPVTALSFRT--DGPPM 219
V + SP + G N +I+L + T + + + W +TALS+ P
Sbjct: 159 VLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKW--ITALSWEPLHANPEC 216
Query: 220 --MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIF 277
+ S S G + VW+ + E +I H + VT + + LL ++S D T+K+W
Sbjct: 217 RYVASSSKDGSVRVWDTTAGRCE-RILTGHTQSVTCLRW-GGDGLLYSASQDRTIKVW-- 272
Query: 278 DKADGNGRLLRIREGH 293
+A +G L R +GH
Sbjct: 273 -RAH-DGVLCRTLQGH 286
Score = 101 (40.6 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 28/116 (24%), Positives = 55/116 (47%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF-FRTHQESS 515
GH + V+ ++I+ S D+++K+W + TGK L S++ + +S
Sbjct: 370 GHQALINQVLFSPDSRIIASASFDKSIKLWDGR-TGKY-LASLRGHVAAVYQIAWSADSR 427
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+L D T+ + D+ + L GH ++ D+SPD + + + D +R+W
Sbjct: 428 LLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 51 (23.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328
EGHS + F + + S +GD+T+R ++ +ET
Sbjct: 111 EGHSEAVISVAF-SPTGKYLASGSGDTTVRFWDLSTET 147
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 129 (50.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 30/123 (24%), Positives = 60/123 (48%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSM 516
H+ VR ++++S +D+TVK+W +T + + S G +++ H +
Sbjct: 175 HINWVRCAKFSPDGRLIVSASDDKTVKLWD--KTSRECVHSYCEHGGFVTYVDFHPSGTC 232
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+A D TV + D+ T +++ H + F P +L+TAS D T+++ D+
Sbjct: 233 VAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEG 292
Query: 577 QLI 579
+L+
Sbjct: 293 RLL 295
Score = 128 (50.1 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 63/258 (24%), Positives = 108/258 (41%)
Query: 72 HEDDITCLS-SDFFHIYTSANN--IIYAWRRGIDIVGT-YKGHTSPVHLILPFGPHLISV 127
H+D +TC++ S H+ S + + W I T ++ HT+ V + H S
Sbjct: 91 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSV-----HFCS- 144
Query: 128 DEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKII 187
D +S V D K + + S F + + V + SP +I +K +
Sbjct: 145 DGQSFVTASDDKTIKVW---STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVK 201
Query: 188 LHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG-SNTGHLTVWNLEDRQVENQIKKA 246
L + + E + + + G VT + F G + +G NT + VW++ ++ Q +
Sbjct: 202 LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNT--VKVWDVRTHRLL-QHYQL 258
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
H V F + LVT+S D+TLK I D +G RLL GH P + F +
Sbjct: 259 HSAAVNALSFHPSGNYLVTASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAF-SRT 313
Query: 307 SDNILSAAGDSTLRIFNT 324
+ S D + ++ +
Sbjct: 314 GEYFASGGSDEQVMVWKS 331
Score = 124 (48.7 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESSM 516
H VR V + Q ++ +D+T+KVW + + L S+ N + + + +
Sbjct: 133 HTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR--QKFLFSLSQHINWVRCAKFSPDGRL 190
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ DD TV + D + + H G +T DF P + A MD T++VWD+ +
Sbjct: 191 IVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTH 250
Query: 577 QLIDCFQ 583
+L+ +Q
Sbjct: 251 RLLQHYQ 257
Score = 116 (45.9 bits), Expect = 0.00095, P = 0.00095
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPL-RSIKLDNGISFFRTHQESS 515
GH V V ++ SG D+TV++W G+ + R+ F + +S
Sbjct: 90 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSF 149
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+ A DD T+ + + LS H+ + A FSPD R +++AS D T+++WD S
Sbjct: 150 VTAS--DDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTS 207
Query: 576 SQLIDCF 582
+ + +
Sbjct: 208 RECVHSY 214
Score = 100 (40.3 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 27/99 (27%), Positives = 44/99 (44%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNIIDID 532
V + G D TVKVW + T + L+ +L + ++ H + L D T+ I+D+
Sbjct: 233 VAAAGMDNTVKVWDVR-THRL-LQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLM 290
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
++ L GH G T FS + + D + VW
Sbjct: 291 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 99 (39.9 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 32/122 (26%), Positives = 60/122 (49%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
VT ++F G ++ SGS + +W + + + E+ + +AH V HF + VT+
Sbjct: 95 VTCVNFSPSGH-LLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSFVTA 152
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDSTLRIFNT 324
S D T+K+W + + L H N+++ S D I+SA+ D T+++++
Sbjct: 153 SDDKTIKVWSTHRQ----KFLFSLSQHI---NWVRCAKFSPDGRLIVSASDDKTVKLWDK 205
Query: 325 KS 326
S
Sbjct: 206 TS 207
Score = 84 (34.6 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 33/106 (31%), Positives = 48/106 (45%)
Query: 228 HLTV-WNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRL 286
HLT+ ED +E K HR VT F +N L + S D+ L +W R
Sbjct: 30 HLTMALPQEDPSLERHFK-GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKP---QSRA 85
Query: 287 LRIREGHSAPPNYIQFYGNSSDNIL-SAAGDSTLRIF--NTKSETS 329
R GH + F + S ++L S + D T+RI+ N K E++
Sbjct: 86 YRFT-GHKDAVTCVNF--SPSGHLLASGSRDKTVRIWVPNIKGEST 128
Score = 55 (24.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 72 HEDDITCLSSDFF--HIYT-SANNIIYAWR-RGIDIVGTYKGHTSPVHLILPFGP--HLI 125
H D +TC+ F + + S ++ + W + + GH V + F P HL+
Sbjct: 49 HRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV-NFSPSGHLL 107
Query: 126 -SVDEESNVKVW--DIKAEET 143
S + V++W +IK E T
Sbjct: 108 ASGSRDKTVRIWVPNIKGEST 128
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 131 (51.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 29/128 (22%), Positives = 64/128 (50%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESS 515
GH + V+ + +++S D T+++W F +TG+ RS+K + + +
Sbjct: 106 GHRASITRVIFHPIFALMVSASEDATIRIWDF-ETGEYE-RSLKGHTDSVQDVAFDAQGK 163
Query: 516 MLAVCLDDFTVNIIDID-TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
+LA C D ++ + D + I+ + GH ++ F P ++++AS D TI++W++
Sbjct: 164 LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVA 223
Query: 575 SSQLIDCF 582
+ + +
Sbjct: 224 TGYCVKTY 231
Score = 111 (44.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 32/122 (26%), Positives = 51/122 (41%)
Query: 451 GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRT 510
G DN+ GH G + SG D+T+++W G L DN +
Sbjct: 299 GADNKKGHHQG----------PFLASGSRDKTIRIWDVS-VGLCLLTLSGHDNWVRGLAF 347
Query: 511 HQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRV 570
H L DD T+ + D+ ++ L H T DF ++I+ S+D T++V
Sbjct: 348 HPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKV 407
Query: 571 WD 572
W+
Sbjct: 408 WE 409
Score = 104 (41.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 28/104 (26%), Positives = 50/104 (48%)
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
+MVS S + +W+ E + E +K H V F LL + S D ++KLW F
Sbjct: 122 LMVSASEDATIRIWDFETGEYERSLK-GHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ 180
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322
++ ++ GH + + F + D +LSA+ D T++++
Sbjct: 181 QSY---ECIKTMHGHDHNVSSVAFVP-AGDYVLSASRDRTIKMW 220
Score = 104 (41.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 511 HQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRV 570
H + LA D T+ I D+ + LSGH + F P ++L++AS D TIRV
Sbjct: 306 HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRV 365
Query: 571 WDI 573
WD+
Sbjct: 366 WDL 368
Score = 61 (26.5 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 19/78 (24%), Positives = 40/78 (51%)
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
HR +T F L+V++S D T+++W F+ G R +GH+ + F ++
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDFE----TGEYERSLKGHTDSVQDVAF--DA 160
Query: 307 SDNIL-SAAGDSTLRIFN 323
+L S + D ++++++
Sbjct: 161 QGKLLASCSADLSIKLWD 178
Score = 58 (25.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDT-----FKIMGKRW 161
GH + + ++ P ++S E++ +++WD + E L D+ F GK
Sbjct: 106 GHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLL 165
Query: 162 NSC 164
SC
Sbjct: 166 ASC 168
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 148 (57.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 61/260 (23%), Positives = 108/260 (41%)
Query: 72 HEDDITCLS-SDFFHIYTSANN--IIYAWRRGIDIVGT-YKGHTSPVHLI--LPFGPHLI 125
H+D +TC++ S H+ S + + W + T ++ HT+ V + G +
Sbjct: 22 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFV 81
Query: 126 SVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKK 185
+ ++ VKVW ++ LS W C SP +I +K
Sbjct: 82 TASDDKTVKVWATHRQKFLFSLS--------QHINWVRCAKF---SPDGRLIVSASDDKT 130
Query: 186 IILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG-SNTGHLTVWNLEDRQVENQIK 244
+ L + + E + + + G VT + F G + +G NT + VW++ ++ Q
Sbjct: 131 VKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNT--VKVWDVRTHRLL-QHY 187
Query: 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304
+ H V G F + L+T+S D+TLK I D +G RLL GH P + F
Sbjct: 188 QLHSAAVNGLSFHPSGNYLITASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAF-S 242
Query: 305 NSSDNILSAAGDSTLRIFNT 324
+ + S D + ++ +
Sbjct: 243 RTGEYFASGGSDEQVMVWKS 262
Score = 128 (50.1 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 30/123 (24%), Positives = 60/123 (48%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSM 516
H+ VR ++++S +D+TVK+W ++ + + S G +++ H +
Sbjct: 106 HINWVRCAKFSPDGRLIVSASDDKTVKLWD--KSSRECVHSYCEHGGFVTYVDFHPSGTC 163
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+A D TV + D+ T +++ H + F P +LITAS D T+++ D+
Sbjct: 164 IAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEG 223
Query: 577 QLI 579
+L+
Sbjct: 224 RLL 226
Score = 126 (49.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESSM 516
H VR V + Q ++ +D+TVKVW + + L S+ N + + + +
Sbjct: 64 HTATVRSVHFCSDGQSFVTASDDKTVKVWATHR--QKFLFSLSQHINWVRCAKFSPDGRL 121
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ DD TV + D + + H G +T DF P + A MD T++VWD+ +
Sbjct: 122 IVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH 181
Query: 577 QLIDCFQ 583
+L+ +Q
Sbjct: 182 RLLQHYQ 188
Score = 116 (45.9 bits), Expect = 0.00096, P = 0.00095
Identities = 35/127 (27%), Positives = 59/127 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPL-RSIKLDNGISFFRTHQESS 515
GH V V ++ SG D+TV++W G+ + R+ F + +S
Sbjct: 21 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSF 80
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+ A DD TV + + LS H+ + A FSPD R +++AS D T+++WD S
Sbjct: 81 VTAS--DDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSS 138
Query: 576 SQLIDCF 582
+ + +
Sbjct: 139 RECVHSY 145
Score = 103 (41.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 29/101 (28%), Positives = 43/101 (42%)
Query: 474 VISGGNDQTVKVWHFKQ---TGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
+ + G D TVKVW + L S + NG+SF H + L D T+ I+D
Sbjct: 164 IAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV-NGLSF---HPSGNYLITASSDSTLKILD 219
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ ++ L GH G T FS + + D + VW
Sbjct: 220 LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
Score = 102 (41.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 33/122 (27%), Positives = 60/122 (49%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
VT ++F G ++ SGS + +W + + + E+ + +AH V HF + VT+
Sbjct: 26 VTCVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTA 83
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDSTLRIFNT 324
S D T+K+W A + L H N+++ S D I+SA+ D T+++++
Sbjct: 84 SDDKTVKVW----ATHRQKFLFSLSQHI---NWVRCAKFSPDGRLIVSASDDKTVKLWDK 136
Query: 325 KS 326
S
Sbjct: 137 SS 138
Score = 84 (34.6 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 22/96 (22%), Positives = 47/96 (48%)
Query: 229 LTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLR 288
L VW+++ + + H+ VT +F + LL + S D T+++W+ G + R
Sbjct: 5 LMVWHMKPQSRAYRFT-GHKDAVTCVNFSPSGHLLASGSRDKTVRIWV-PNVKGESTVFR 62
Query: 289 IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
H+A + F + + ++A+ D T++++ T
Sbjct: 63 ---AHTATVRSVHFCSDGQ-SFVTASDDKTVKVWAT 94
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 128 (50.1 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 31/123 (25%), Positives = 59/123 (47%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSM 516
H+ VR ++++S +D+TVK+W +T + + S G +++ H +
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWD--KTSRECIHSYCEHGGFVTYVDFHPSGTC 201
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+A D TV + D T +++ H + F P +LITAS D T+++ D+
Sbjct: 202 IAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEG 261
Query: 577 QLI 579
+L+
Sbjct: 262 RLL 264
Score = 126 (49.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 63/261 (24%), Positives = 108/261 (41%)
Query: 72 HEDDITCLS-SDFFHIYTSANN--IIYAWRRGIDIVGT-YKGHTSPVHLILPFGPHLISV 127
H+D +TC++ S H+ S + + W + T ++ HT+ V + H S
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV-----HFCS- 113
Query: 128 DEESNVKVWD---IKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNK 184
D +S V D +K T+ + + T I W C SP +I +K
Sbjct: 114 DGQSLVTASDDKTVKVWSTHRQRFLFSLTQHI---NWVRCAKF---SPDGRLIVSASDDK 167
Query: 185 KIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG-SNTGHLTVWNLEDRQVENQI 243
+ L + + E + + + G VT + F G + +G NT + VW+ ++ Q
Sbjct: 168 TVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNT--VKVWDARTHRLL-QH 224
Query: 244 KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFY 303
+ H V F + L+T+S D+TLK I D +G RLL GH P + F
Sbjct: 225 YQLHSAAVNALSFHPSGNYLITASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAF- 279
Query: 304 GNSSDNILSAAGDSTLRIFNT 324
+ + S D + ++ +
Sbjct: 280 SRTGEYFASGGSDEQVMVWKS 300
Score = 123 (48.4 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 35/127 (27%), Positives = 59/127 (46%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESSM 516
H VR V + Q +++ +D+TVKVW + + L S+ N + + + +
Sbjct: 102 HTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR--QRFLFSLTQHINWVRCAKFSPDGRL 159
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ DD TV + D + I H G +T DF P + A MD T++VWD +
Sbjct: 160 IVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTH 219
Query: 577 QLIDCFQ 583
+L+ +Q
Sbjct: 220 RLLQHYQ 226
Score = 118 (46.6 bits), Expect = 0.00068, P = 0.00068
Identities = 32/126 (25%), Positives = 54/126 (42%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH V V ++ SG D+TV++W G+ + + +
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTAT-VRSVHFCSDGQS 117
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
L DD TV + + L+ H+ + A FSPD R +++AS D T+++WD S
Sbjct: 118 LVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR 177
Query: 577 QLIDCF 582
+ I +
Sbjct: 178 ECIHSY 183
Score = 104 (41.7 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 34/122 (27%), Positives = 61/122 (50%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
VT ++F G ++ SGS + +W + + + E+ + +AH V HF + LVT+
Sbjct: 64 VTCVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTA 121
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDSTLRIFNT 324
S D T+K+W + R L H N+++ S D I+SA+ D T+++++
Sbjct: 122 SDDKTVKVWSTHRQ----RFLFSLTQHI---NWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 325 KS 326
S
Sbjct: 175 TS 176
Score = 97 (39.2 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNIIDID 532
+ + G D TVKVW + T + L+ +L + ++ H + L D T+ I+D+
Sbjct: 202 IAAAGMDNTVKVWDAR-THRL-LQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLM 259
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
++ L GH G T FS + + D + VW
Sbjct: 260 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 92 (37.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 42/174 (24%), Positives = 77/174 (44%)
Query: 107 YKGHTSPVHLILPFG---PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS 163
+KGH V + F HL S +S + +W +K + + D +
Sbjct: 15 FKGHRDAVTCV-DFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAV--------T 65
Query: 164 CVNVLEPSPVVDIIGVGLSNK--KIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
CVN SP ++ G +K +I + N+ + ++ F V ++ F +DG + V
Sbjct: 66 CVNF---SPSGHLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSL-V 119
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
+ S+ + VW+ ++ + + H V A F + L+V++S D T+KLW
Sbjct: 120 TASDDKTVKVWSTHRQRFLFSLTQ-HINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Score = 85 (35.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 31/98 (31%), Positives = 44/98 (44%)
Query: 235 EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS 294
ED +E K HR VT F N L + S D+TL +W R R GH
Sbjct: 7 EDPSLERHFK-GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKP---QSRAYRFT-GHK 61
Query: 295 APPNYIQFYGNSSDNIL-SAAGDSTLRIF--NTKSETS 329
+ F + S ++L S + D T+RI+ N K E++
Sbjct: 62 DAVTCVNF--SPSGHLLASGSRDKTVRIWVPNVKGEST 97
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 116 (45.9 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 29/105 (27%), Positives = 53/105 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG +D T+ +W + KP R I+ +S ++A D ++ + D T
Sbjct: 345 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRT 404
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ L GH+ + +S DSR L++ S D T++VWD+ + +L
Sbjct: 405 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKL 449
Score = 114 (45.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 34/123 (27%), Positives = 66/123 (53%)
Query: 213 RTDGPPMMVSGSNTGHLTVWN-LEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271
R GP +VSGS+ L +W+ ED++ ++ H+ ++ F + ++ ++S D +
Sbjct: 338 RGQGPERLVSGSDDFTLFLWSPAEDKKPLARMT-GHQALINQVVFSPDSRVIASASFDKS 396
Query: 272 LKLWIFDKADGN-GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
+KLW DG G+ L GH A I + +S ++S + DSTL++++ K++ +
Sbjct: 397 IKLW-----DGRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDVKAQKLS 450
Query: 331 KNL 333
+L
Sbjct: 451 TDL 453
Score = 102 (41.0 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 28/116 (24%), Positives = 55/116 (47%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF-FRTHQESS 515
GH + VV ++++ S D+++K+W + TGK L S++ + +S
Sbjct: 371 GHQALINQVVFSPDSRVIASASFDKSIKLWDGR-TGKY-LASLRGHVAAVYQIAWSADSR 428
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+L D T+ + D+ + L GH ++ D+SPD + + + D +R+W
Sbjct: 429 LLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 100 (40.3 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 51/196 (26%), Positives = 85/196 (43%)
Query: 108 KGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKR-WNSC 164
+GH+ V + P G +L S ++ V+ WD+ E + F G R W
Sbjct: 112 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPH---------FTCQGHRHW--- 159
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI---QTWGPVTALSFRT--DGPPM 219
V + SP + G N +I+L + T + + + W +TALS+ P
Sbjct: 160 VLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKW--ITALSWEPLHANPEC 217
Query: 220 --MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIF 277
+ S S G + VW+ + E + H + VT + + LL ++S D T+K+W
Sbjct: 218 RYVASSSKDGSVRVWDTTAGRCERTLT-GHAQSVTCLRW-GGDGLLYSASQDRTIKVW-- 273
Query: 278 DKADGNGRLLRIREGH 293
+A +G L R +GH
Sbjct: 274 -RAH-DGVLCRTLQGH 287
Score = 56 (24.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
PGH V V Q V SGG D+ +++W
Sbjct: 454 PGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 51 (23.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328
EGHS + F + + S +GD+T+R ++ +ET
Sbjct: 112 EGHSEAVISVAF-SPTGKYLASGSGDTTVRFWDLSTET 148
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 114 (45.2 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 46/154 (29%), Positives = 72/154 (46%)
Query: 181 LSNKKIILHNILTDESLMEFIQ-TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239
L N KI + + T+ SL++ IQ T PV A F +V GS+ + V+N +
Sbjct: 32 LYNGKIEIWSYATN-SLVKSIQVTELPVRAGKFIAR-KNWIVVGSDDFQIRVYNYNTGEK 89
Query: 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNY 299
Q + AH + ++P ++TSS D T+KLW +D N +L + EGH
Sbjct: 90 VTQFE-AHPDYIRSIAVHPSKPYILTSSDDLTIKLWNWDH---NWKLEQTFEGHQHYVMS 145
Query: 300 IQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
+ F + SA D T++I++ S N L
Sbjct: 146 VNFNPKDPNTFASACLDRTVKIWSLGSSQPNFTL 179
Score = 109 (43.4 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 26/96 (27%), Positives = 48/96 (50%)
Query: 480 DQTVKVWHFKQTGKPPLRSIKLD-NGISF--FRTHQESSMLAVCLDDFTVNIIDIDTCTI 536
D+TVK+W + +P I + G+++ + + L DD T+ + D T +
Sbjct: 162 DRTVKIWSLGSS-QPNFTLIAHEAKGVNYVDYYPQADKPYLITSSDDKTIKVWDYQTKSC 220
Query: 537 IRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+ L GH+ ++ A F P+ +++ S D TIR W+
Sbjct: 221 VATLEGHLSNVSFAIFHPELPIIVSGSEDGTIRFWN 256
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 35/124 (28%), Positives = 61/124 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESS 515
GH + V +++S D T+KVW F ++G+ R++K N + + +
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDF-ESGEFE-RTLKGHTNAVQDIDFDKTGN 161
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+LA C D T+ + D T ++ L GH ++ F+P LI++S D TI+VW+ +
Sbjct: 162 LLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAAT 221
Query: 576 SQLI 579
I
Sbjct: 222 GYCI 225
Score = 115 (45.5 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 32/115 (27%), Positives = 53/115 (46%)
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
+MVS S + VW+ E + E +K H V F LL + S D T+KLW F
Sbjct: 120 LMVSASEDATIKVWDFESGEFERTLK-GHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQ 178
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
D ++ GH + ++F S D ++S++ D T++++ + K L
Sbjct: 179 TYD----CVKTLHGHDHNVSCVRFTP-SGDQLISSSRDKTIKVWEAATGYCIKTL 228
Score = 99 (39.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCT 535
+G D+T+K+W TG+ I DN + R H L DD T+ + DI
Sbjct: 321 TGSRDKTIKIWELA-TGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGR 379
Query: 536 IIRKLS-GHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
I+ ++ H ++ DF + + T +D I+VW +
Sbjct: 380 CIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKL 418
Score = 93 (37.8 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 27/98 (27%), Positives = 49/98 (50%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E I HR + F + L+V++S D T+K+W F+ +G R +GH+
Sbjct: 95 RPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFE----SGEFERTLKGHTNA 150
Query: 297 PNYIQFYGNSSDNIL-SAAGDSTLRIFNTKSETSNKNL 333
I F + + N+L S + D T+++++ ++ K L
Sbjct: 151 VQDIDF--DKTGNLLASCSADLTIKLWDFQTYDCVKTL 186
Score = 88 (36.0 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 33/125 (26%), Positives = 54/125 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH VR + + S NDQT+K W+ +K G T++E S
Sbjct: 230 GHEDWVRKITVSEDGSCIASCSNDQTIKTWNI----------VK---G-ECLATYREHSH 275
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGH--MGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
+ CL T NIIDI +++ G + Q + +L T S D TI++W++
Sbjct: 276 VVECLAFSTANIIDIPG-SLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELA 334
Query: 575 SSQLI 579
+ + +
Sbjct: 335 TGRCL 339
Score = 78 (32.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA D T+ I ++ T + GH + F P ++L++ D TIRVWDI
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQG 378
Query: 577 QLI 579
+ I
Sbjct: 379 RCI 381
Score = 72 (30.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 24/88 (27%), Positives = 40/88 (45%)
Query: 404 PERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGGV 462
PE + KQ P + CG ++ G + + + +G +Y GHDN V
Sbjct: 298 PEGKSKVKQG-PGGNLVGQCG-YLATGSRDKTIKIWELATGRCLATYIGHDNW------V 349
Query: 463 RGVVSDNLNQIVISGGNDQTVKVWHFKQ 490
R V + ++S G+D+T++VW Q
Sbjct: 350 RAVRFHPCGKFLLSVGDDKTIRVWDIAQ 377
Score = 64 (27.6 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 89 SANNIIYAWR-RGIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWD 137
SA+ I W + D V T GH V + P G LIS + +KVW+
Sbjct: 167 SADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWE 218
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 109 (43.4 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 33/117 (28%), Positives = 52/117 (44%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTH-QES 514
GH+ V V + SGG D ++W + + L I N +S + QE
Sbjct: 421 GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRM--RKSLYIIPAHANLVSQVKYEPQEG 478
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
LA D VNI ++++ L+GH ++ D + DS + T S D TI++W
Sbjct: 479 YFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 108 (43.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 41/126 (32%), Positives = 61/126 (48%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK--KAHRKVVTGAHFLYNEPLL 263
P+T SF DG ++ + S +G +W + QV N I K H++ T F + L
Sbjct: 257 PLTGCSFSRDGK-ILATCSLSGVTKLWEMP--QVTNTIAVLKDHKERATDVVFSPVDDCL 313
Query: 264 VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF- 322
T+S D T KLW K DG LL+ EGH + F+ S + + + D T R++
Sbjct: 314 ATASADRTAKLW---KTDGT--LLQTFEGHLDRLARVAFHP-SGKYLGTTSYDKTWRLWD 367
Query: 323 -NTKSE 327
NT +E
Sbjct: 368 INTGAE 373
Score = 69 (29.3 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 29/121 (23%), Positives = 47/121 (38%)
Query: 455 QPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPL---RSIKLDNGISFFRTH 511
Q GH V G+ + S G D +VW + TG+ L IK ++F
Sbjct: 377 QEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLR-TGRSILVFQGHIKPVFSVNF---S 432
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSP-DSRWLITASMDCTIRV 570
LA +D I D+ + + H ++ + P + +L TAS D + +
Sbjct: 433 PNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNI 492
Query: 571 W 571
W
Sbjct: 493 W 493
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 174 (66.3 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 49/138 (35%), Positives = 70/138 (50%)
Query: 448 GSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF 507
GS H + GH VR V+ + +Q++ S +D TVK+W TG L+ L+ +
Sbjct: 411 GSLQHTLE-GHRDWVRSVIFSHDSQLLASASDDSTVKIW---DTGTGSLQHT-LEGHRDW 465
Query: 508 FRT---HQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
R+ +S +LA DD TV I D + + L GH +T FS DSR L +AS
Sbjct: 466 VRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASN 525
Query: 565 DCTIRVWDIPSSQLIDCF 582
D T+R+WDI + L F
Sbjct: 526 DQTVRIWDIEARSLQHTF 543
Score = 148 (57.2 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 44/134 (32%), Positives = 68/134 (50%)
Query: 448 GSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF 507
GS H + GH VR V+ + ++++ S +D TVK+W TG L+ L+ +
Sbjct: 328 GSLQHTLE-GHSDLVRSVIFSHDSRLLASA-SDSTVKIW---DTGTGSLQHT-LEGHRDW 381
Query: 508 FRT---HQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
R+ +S +LA DD TV I D T ++ L GH + FS DS+ L +AS
Sbjct: 382 VRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASD 441
Query: 565 DCTIRVWDIPSSQL 578
D T+++WD + L
Sbjct: 442 DSTVKIWDTGTGSL 455
Score = 132 (51.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRT--HQES 514
GH V V + ++++ S +D+TVK+W +TG L+ L+ R+
Sbjct: 294 GHEAAVLSVSYSHDSRLLASASDDRTVKIWD-TETGS--LQHT-LEGHSDLVRSVIFSHD 349
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
S L D TV I D T ++ L GH + FS DS+ L +AS D T+++WD
Sbjct: 350 SRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTG 409
Query: 575 SSQL 578
+ L
Sbjct: 410 TGSL 413
Score = 122 (48.0 bits), Expect = 0.00042, P = 0.00042
Identities = 59/275 (21%), Positives = 115/275 (41%)
Query: 61 NHFK-LLSVSPQHEDDITCLS-SDFFHIYTSANN--IIYAWRRGI-DIVGTYKGHTSPVH 115
NH+ L HE + +S S + SA++ + W + T +GH+ V
Sbjct: 283 NHWSPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVR 342
Query: 116 -LILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFK-IMGKRWNSCVNVLEPSPV 173
+I L++ +S VK+WD L D + ++ + +
Sbjct: 343 SVIFSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDST 402
Query: 174 VDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWN 233
V I G + + H + E + W V ++ F D ++ S S+ + +W+
Sbjct: 403 VKIWDTGTGS---LQHTL-------EGHRDW--VRSVIFSHDSQ-LLASASDDSTVKIWD 449
Query: 234 LEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH 293
+++ ++ HR V F ++ LL ++S D T+++W +K L EGH
Sbjct: 450 TGTGSLQHTLE-GHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTL----EGH 504
Query: 294 SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328
S+ + F + S + SA+ D T+RI++ ++ +
Sbjct: 505 SSLVTSVSF-SHDSRLLASASNDQTVRIWDIEARS 538
Score = 39 (18.8 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 153 TFKIMGKRWNSCVNVL 168
T + +G W SC VL
Sbjct: 13 TLRDLGTSWESCRRVL 28
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 110 (43.8 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 523 DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
D VNI D +++ LSGH G + D S D RW+++ D T+++W
Sbjct: 475 DHKVNIYSADDWALVQSLSGHTGPVASVDVSRDGRWIVSGGHDRTVKLW 523
Score = 105 (42.0 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 51/245 (20%), Positives = 102/245 (41%)
Query: 99 RGIDIVGTYKG---HTSPVHLILPFGPHLISVDEESNVKVWDI-KAEETYLELSFDNDTF 154
+G ++ G+ H S + I P G + + + VK++ I +ET ++ T
Sbjct: 194 QGFELQGSQTAGQRHIS-ITRISPNGETVATGNWGGQVKLFSIPNLDET---MNLRGHTN 249
Query: 155 KIMGKRWNSCVNVLEPSPVVDIIGV--GLSNKKIILHNILTDESLMEFIQTWGPVTALSF 212
K+ G W + E + + + + G + ++ L ++ D L V + F
Sbjct: 250 KVSGMCWFPGATLQESNVSAESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDF 309
Query: 213 RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTL 272
G + S S +W++E R E +++ H + V F + LL ++ D+
Sbjct: 310 HPSGR-FLASASEDTSWRLWDVEKR-TELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIG 367
Query: 273 KLWIFDKADGNGRLLRIREGHS---APPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETS 329
++W D GR + I +GH P Y +G+ +LSA+ D ++ ++ +
Sbjct: 368 RIW--DLR--TGRTIMILDGHMDGHIKPIYALDWGSDGHRVLSASADGWIKCWDVRKVQR 423
Query: 330 NKNLG 334
+G
Sbjct: 424 TGGVG 428
Score = 74 (31.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 44/181 (24%), Positives = 78/181 (43%)
Query: 79 LSSDFFHIYTS-ANNIIYAWRRGIDI-VGTYKGHTSPVHLI--LPFGPHLISVDEESNVK 134
+S++ ++ T A + W D + T GHT V + P G L S E+++ +
Sbjct: 267 VSAESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASEDTSWR 326
Query: 135 VWDI-KAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV--GLSNKKIILHNI 191
+WD+ K E L+ F + +N ++L S D IG L + I+
Sbjct: 327 LWDVEKRTELLLQEGHSRGVFAVS---FNGDGSLLA-SAGQDSIGRIWDLRTGRTIM--- 379
Query: 192 LTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVV 251
+ D + I+ P+ AL + +DG ++ S S G + W++ Q + AH V
Sbjct: 380 ILDGHMDGHIK---PIYALDWGSDGHRVL-SASADGWIKCWDVRKVQRTGGVG-AHTSAV 434
Query: 252 T 252
+
Sbjct: 435 S 435
Score = 72 (30.4 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 424 GNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTV 483
G F++ SSG + NI S + GH G V V + ++SGG+D+TV
Sbjct: 466 GTFLV---SSGFDHKVNIYSADDWALV--QSLSGHTGPVASVDVSRDGRWIVSGGHDRTV 520
Query: 484 KVW 486
K+W
Sbjct: 521 KLW 523
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 130 (50.8 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 30/123 (24%), Positives = 60/123 (48%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSM 516
H+ VR ++++S +D+TVK+W +T + + S G +++ H +
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWD--KTSRECVHSYCEHGGFVTYVDFHPSGTC 201
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+A D TV + D+ T +++ H + F P +L+TAS D T+++ D+
Sbjct: 202 IAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEG 261
Query: 577 QLI 579
+L+
Sbjct: 262 RLL 264
Score = 128 (50.1 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 62/258 (24%), Positives = 108/258 (41%)
Query: 72 HEDDITCLS-SDFFHIYTSANN--IIYAWRRGIDIVGT-YKGHTSPVHLILPFGPHLISV 127
H+D +TC++ S H+ S + + W + T ++ HT+ V + H S
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV-----HFCS- 113
Query: 128 DEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKII 187
D +S V D K + + S F + + V + SP +I +K +
Sbjct: 114 DGQSFVTASDDKTVKVW---STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 188 LHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG-SNTGHLTVWNLEDRQVENQIKKA 246
L + + E + + + G VT + F G + +G NT + VW++ ++ Q +
Sbjct: 171 LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNT--VKVWDVRTHRLL-QHYQL 227
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
H V F + LVT+S D+TLK I D +G RLL GH P + F +
Sbjct: 228 HSAAVNALSFHPSGNYLVTASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAF-SRT 282
Query: 307 SDNILSAAGDSTLRIFNT 324
+ S D + ++ +
Sbjct: 283 GEYFASGGSDEQVMVWKS 300
Score = 126 (49.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESSM 516
H VR V + Q ++ +D+TVKVW + + L S+ N + + + +
Sbjct: 102 HTATVRSVHFCSDGQSFVTASDDKTVKVWSTHR--QKFLFSLSQHINWVRCAKFSPDGRL 159
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ DD TV + D + + H G +T DF P + A MD T++VWD+ +
Sbjct: 160 IVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH 219
Query: 577 QLIDCFQ 583
+L+ +Q
Sbjct: 220 RLLQHYQ 226
Score = 118 (46.6 bits), Expect = 0.00068, P = 0.00068
Identities = 35/127 (27%), Positives = 59/127 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPL-RSIKLDNGISFFRTHQESS 515
GH V V ++ SG D+TV++W G+ + R+ F + +S
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSF 118
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+ A DD TV + + LS H+ + A FSPD R +++AS D T+++WD S
Sbjct: 119 VTAS--DDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTS 176
Query: 576 SQLIDCF 582
+ + +
Sbjct: 177 RECVHSY 183
Score = 99 (39.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNIIDID 532
+ + G D TVKVW + T + L+ +L + ++ H + L D T+ I+D+
Sbjct: 202 IAAAGMDNTVKVWDVR-THRL-LQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLM 259
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
++ L GH G T FS + + D + VW
Sbjct: 260 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 98 (39.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 32/122 (26%), Positives = 60/122 (49%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
VT ++F G ++ SGS + +W + + + E+ + +AH V HF + VT+
Sbjct: 64 VTCVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTA 121
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDSTLRIFNT 324
S D T+K+W + + L H N+++ S D I+SA+ D T+++++
Sbjct: 122 SDDKTVKVWSTHRQ----KFLFSLSQHI---NWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 325 KS 326
S
Sbjct: 175 TS 176
Score = 80 (33.2 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 30/98 (30%), Positives = 43/98 (43%)
Query: 235 EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS 294
ED +E K HR VT F N L + S D+ L +W R R GH
Sbjct: 7 EDPSLERHFK-GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQT---RAYRFA-GHK 61
Query: 295 APPNYIQFYGNSSDNIL-SAAGDSTLRIF--NTKSETS 329
+ F + S ++L S + D T+RI+ N K E++
Sbjct: 62 DAVTCVNF--SPSGHLLASGSRDKTVRIWVPNVKGEST 97
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 53/223 (23%), Positives = 98/223 (43%)
Query: 104 VGTYKGHTSPVHLIL---PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKR 160
+ T +GH + V+ I P+G + + + K+W ++ + Y +F T +I+
Sbjct: 127 LNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYH--TFRGHTAEIV--- 181
Query: 161 WNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMM 220
C++ +P ++ G + L +I E + + +LSF T G +
Sbjct: 182 ---CLSF---NPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGD-RI 234
Query: 221 VSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA 280
++GS + VW+ + + N I H ++ A F ++ L++T S D T KLW D
Sbjct: 235 ITGSFDHTVVVWDADTGRKVN-ILIGHCAEISSASFNWDCSLILTGSMDKTCKLW--DAT 291
Query: 281 DGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
NG+ + GH + + I +A+ D T RIF+
Sbjct: 292 --NGKCVATLTGHD-DEILDSCFDYTGKLIATASADGTARIFS 331
Score = 129 (50.5 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 35/128 (27%), Positives = 55/128 (42%)
Query: 457 GHVGGVRGVVSDNLN-QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS 515
GH + S N + ++++G D+T K+W GK D+ I
Sbjct: 259 GHCAEISSA-SFNWDCSLILTGSMDKTCKLWD-ATNGKCVATLTGHDDEILDSCFDYTGK 316
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
++A D T I T I KL GH G+++ F+P L+T S D T R+WD +
Sbjct: 317 LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQT 376
Query: 576 SQLIDCFQ 583
Q + +
Sbjct: 377 GQCLQVLE 384
Score = 111 (44.1 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP--PLRSIKLDNGISFFRTHQES 514
GH + + + + +V +G D T K+W Q G+ LR + F T +
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI-QNGEEVYTLRGHSAEIISLSFNTSGDR 233
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
+ D TV + D DT + L GH +++ A F+ D ++T SMD T ++WD
Sbjct: 234 IITGSF--DHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDAT 291
Query: 575 SSQLI 579
+ + +
Sbjct: 292 NGKCV 296
Score = 81 (33.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 43/155 (27%), Positives = 66/155 (42%)
Query: 181 LSNKKIILHNI--LTDES-LMEFIQTWGPVTALSFRTDGPPMMVS------GSNTGHLTV 231
L K I L ++ TD S L+E IQ P+ S RT+ +++ G N+ H T
Sbjct: 25 LKTKSIDLLDLGPSTDVSALVEEIQKAEPLLTAS-RTEQVKLLIQRLQEKLGQNSNH-TF 82
Query: 232 WNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE 291
+ + + KAH +T + +T S D T KLW D A G L E
Sbjct: 83 YLFK-------VLKAHILPLTNVALNKSGSCFITGSYDRTCKLW--DTASGEE--LNTLE 131
Query: 292 GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
GH I F D I + + D T ++++ ++
Sbjct: 132 GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVET 166
Score = 81 (33.6 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 26/116 (22%), Positives = 47/116 (40%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESS 515
GH + D +++ + D T ++ F + + ++ G IS + + +
Sbjct: 301 GHDDEILDSCFDYTGKLIATASADGTARI--FSAATRKCIAKLEGHEGEISKISFNPQGN 358
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
L D T I D T ++ L GH ++ F+ +IT S D T R+W
Sbjct: 359 HLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
>CGD|CAL0005179 [details] [associations]
symbol:orf19.5410 species:5476 "Candida albicans" [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005179 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000922 GO:GO:0005874 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K01062 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 RefSeq:XP_717688.1
RefSeq:XP_717782.1 ProteinModelPortal:Q5A7Q6 STRING:Q5A7Q6
GeneID:3640588 GeneID:3640622 KEGG:cal:CaO19.12865
KEGG:cal:CaO19.5410 Uniprot:Q5A7Q6
Length = 486
Score = 145 (56.1 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 53/217 (24%), Positives = 102/217 (47%)
Query: 115 HLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN-----SCVNVLE 169
H++L L+++D+ S + +++ + YLE + ++ K + S +N +
Sbjct: 32 HVLLDQLSKLLNIDQ-STQESNNVEKVDNYLEKRWST-VLRLQKKIIDLENEISNLNNII 89
Query: 170 PSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHL 229
S D G+ LS KI N + ++ + Q VT + + P++++G N G+L
Sbjct: 90 NSTNSDNNGIILSKDKI---NWIPKGAVKQSYQCENIVTTVKLHPN-LPLVLNGCNDGNL 145
Query: 230 TVWNL--EDRQVENQIKKAHRKVVTGAHFLYNEPL-LVTSSPDNTLKLWIFDKADGNGRL 286
+WN+ +D + ++ KAH + + F Y +P L T S D T+K+W D
Sbjct: 146 YIWNISNDDNTIPEKMIKAHTRAINKICFTYKKPYYLATCSSDLTIKIW-----DEKFNH 200
Query: 287 LRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
+R GH + IQF + + S + D +R+++
Sbjct: 201 IRTLNGHEHTVSSIQFSPVDNSILYSVSRDKNIRVWD 237
Score = 136 (52.9 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 49/144 (34%), Positives = 71/144 (49%)
Query: 437 DRFN-IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP- 494
D+ N I GA + SY +N V V+ + NL +V++G ND + +W+
Sbjct: 104 DKINWIPKGAVKQSYQCENI---VTTVK--LHPNL-PLVLNGCNDGNLYIWNISNDDNTI 157
Query: 495 PLRSIKLD----NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDA 550
P + IK N I F T+++ LA C D T+ I D + IR L+GH ++
Sbjct: 158 PEKMIKAHTRAINKICF--TYKKPYYLATCSSDLTIKIWD-EKFNHIRTLNGHEHTVSSI 214
Query: 551 DFSP-DSRWLITASMDCTIRVWDI 573
FSP D+ L + S D IRVWDI
Sbjct: 215 QFSPVDNSILYSVSRDKNIRVWDI 238
Score = 66 (28.3 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+I +L GH + P+ +++I+ S D TI+ WD+
Sbjct: 383 LIAELKGHSSWVKSLCVHPNGKFIISGSDDKTIKFWDL 420
Score = 57 (25.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
GH V+ + + +ISG +D+T+K W
Sbjct: 389 GHSSWVKSLCVHPNGKFIISGSDDKTIKFW 418
Score = 52 (23.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 557 RWLITASMDCTIRVWDIP 574
++ ITAS D TI++W IP
Sbjct: 344 KYCITASRDNTIKLWLIP 361
Score = 44 (20.5 bits), Expect = 9.7e-07, Sum P(3) = 9.7e-07
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 511 HQESSMLAVCLDDFTVNIIDI----DT--CTIIRKLSGHMGQLTDADFS 553
H + DD T+ D+ +T +++ + GH G + D DF+
Sbjct: 400 HPNGKFIISGSDDKTIKFWDLSGLLETGYVNVVKTIIGHDGFINDIDFA 448
Score = 43 (20.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 466 VSDNLNQIVISGGNDQTVKVWH 487
V + + ISG D ++K+W+
Sbjct: 465 VEKRMRCLFISGSADNSIKLWN 486
Score = 39 (18.8 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 475 ISGGNDQTVKVWHFKQTG----KPPLRSIKLDNGISF 507
I+ D T+K+W +PPL S K +N S+
Sbjct: 347 ITASRDNTIKLWLIPPPTIAPHRPPLPS-KYNNSQSW 382
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 145 (56.1 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 41/123 (33%), Positives = 61/123 (49%)
Query: 457 GHVGGVRGV-VSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQE- 513
GH+G V GV S N I +G D T K+W ++ + P+ +I N IS + QE
Sbjct: 435 GHLGAVFGVDFSPNGFHIA-TGSQDNTCKIWDLRR--RQPVYTIPAHTNLISDVKYQQEC 491
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
S L C D T I T ++ L GH ++ D +P+S+++ T S D T ++W
Sbjct: 492 GSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLWS- 550
Query: 574 PSS 576
P S
Sbjct: 551 PDS 553
Score = 67 (28.6 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 25/110 (22%), Positives = 53/110 (48%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIK--KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIF 277
M SG + G + +W + + I HR V+ F + L T+ D++ +LW
Sbjct: 325 MASGGHDGAVKLWGFNNEESIADITGHMPHR--VSKVAFHPSGRFLATACYDSSWRLWDL 382
Query: 278 DKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFNTKS 326
++ +L +EGH+ P + + ++ + S +L G D+ R+++ ++
Sbjct: 383 EQKT---EVLH-QEGHAKPVHCLSYHSDGS--VLVTGGLDAFGRVWDLRT 426
Score = 46 (21.3 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 22/85 (25%), Positives = 40/85 (47%)
Query: 251 VTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFY-GNSSD- 308
V+ A F + LL+TSS KLW + L + GH++ + G +D
Sbjct: 264 VSSAAFSEDSSLLLTSSWSGLCKLWSVPDCE----LKQTLRGHASYVGGVALRPGVKADE 319
Query: 309 -NILS-AAG--DSTLRIFNTKSETS 329
N+++ A+G D ++++ +E S
Sbjct: 320 ENVVAMASGGHDGAVKLWGFNNEES 344
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 116 (45.9 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 29/105 (27%), Positives = 53/105 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG +D T+ +W + KP R I+ +S ++A D ++ + D T
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT 403
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ L GH+ + +S DSR L++ S D T++VWD+ + +L
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKL 448
Score = 114 (45.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 33/117 (28%), Positives = 63/117 (53%)
Query: 213 RTDGPPMMVSGSNTGHLTVWN-LEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271
R GP +VSGS+ L +W+ ED++ ++ H+ ++ F + ++ ++S D +
Sbjct: 337 RGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMT-GHQALINQVLFSPDSRIVASASFDKS 395
Query: 272 LKLWIFDKADGN-GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
+KLW DG G+ L GH A I + +S ++S + DSTL++++ K++
Sbjct: 396 IKLW-----DGRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDVKAQ 446
Score = 102 (41.0 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 29/116 (25%), Positives = 55/116 (47%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF-FRTHQESS 515
GH + V+ ++IV S D+++K+W + TGK L S++ + +S
Sbjct: 370 GHQALINQVLFSPDSRIVASASFDKSIKLWDGR-TGKY-LASLRGHVAAVYQIAWSADSR 427
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+L D T+ + D+ + L GH ++ D+SPD + + + D +R+W
Sbjct: 428 LLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 95 (38.5 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 50/196 (25%), Positives = 85/196 (43%)
Query: 108 KGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKR-WNSC 164
+GH+ V + P G +L S ++ V+ WD+ E + F G R W
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPH---------FTCKGHRHW--- 158
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI---QTWGPVTALSFRT--DGPPM 219
V + SP + G N +I+L + T + + + W +T LS+ P
Sbjct: 159 VLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKW--ITGLSWEPLHANPEC 216
Query: 220 --MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIF 277
+ S S G + +W+ + E +I H + VT + + LL ++S D T+K+W
Sbjct: 217 RYVASSSKDGSVRIWDTTAGRCE-RILTGHTQSVTCLRW-GGDGLLYSASQDRTIKVW-- 272
Query: 278 DKADGNGRLLRIREGH 293
+A +G L R +GH
Sbjct: 273 -RAH-DGVLCRTLQGH 286
Score = 56 (24.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
PGH V V Q V SGG D+ +++W
Sbjct: 453 PGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 51 (23.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328
EGHS + F + + S +GD+T+R ++ +ET
Sbjct: 111 EGHSEAVISVAF-SPTGKYLASGSGDTTVRFWDLSTET 147
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 53/226 (23%), Positives = 96/226 (42%)
Query: 108 KGHTSPVHLILPFGPH---LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSC 164
K H + I P P+ ++V + VK W+ + ++ + + + + N
Sbjct: 484 KAHGGTIWSITPI-PNDSGFVTVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDD 542
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWG---PVTALSFRTDGPPMMV 221
V + SP I V L + + + +SL ++ +G PV + +DG ++V
Sbjct: 543 VLAVAISPDAKHIAVALLDSTV---KVFYMDSLKFYLSLYGHKLPVMCIDISSDGE-LIV 598
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
+GS +L +W L+ I AH V G F+ N L + D +K W DK +
Sbjct: 599 TGSQDKNLKIWGLDFGDCHKSIF-AHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFE 657
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
LL + EGH A + N D +++ + D ++R ++ E
Sbjct: 658 ---HLLTL-EGHHAEI-WCLAISNRGDFLVTGSHDRSMRRWDRSEE 698
Score = 125 (49.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 46/217 (21%), Positives = 92/217 (42%)
Query: 365 SFGLAREKDWNNIAAIHTGK-------NKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTC 417
SFG+ D +NIA TGK KV +W + + L P + T
Sbjct: 13 SFGVISSVD-SNIAYDSTGKYVLAPALEKVGIWHV-RQGVCSKTLTPSSSRGGPSLAVTS 70
Query: 418 VYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISG 477
+ + + V +GY+ G + ++ + G ++ H G V + + + ++ SG
Sbjct: 71 I-ASSASSLVAVGYADGSIRIWDTEKGTCEVNFN-----SHKGAVTALRYNKVGSMLASG 124
Query: 478 GNDQTVKVWHFK-QTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI 536
D + +W ++G LR + D +++ D F + + D++T
Sbjct: 125 SKDNDIILWDVVGESGLFRLRGHR-DQVTDLVFLDGGKKLVSSSKDKF-LRVWDLETQHC 182
Query: 537 IRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
++ +SGH ++ D P+ R+++T S D +R + +
Sbjct: 183 MQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAV 219
Score = 113 (44.8 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 42/165 (25%), Positives = 71/165 (43%)
Query: 124 LISVD-EESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS 182
L++V + ++++WD E+ E++F++ + R+N V ++ G
Sbjct: 78 LVAVGYADGSIRIWD--TEKGTCEVNFNSHKGAVTALRYNK---------VGSMLASGSK 126
Query: 183 NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242
+ IIL +++ + L VT L F DG +VS S L VW+LE + Q
Sbjct: 127 DNDIILWDVVGESGLFRLRGHRDQVTDLVF-LDGGKKLVSSSKDKFLRVWDLETQHCM-Q 184
Query: 243 IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLL 287
I H V E +VT S D L+ + + NG L+
Sbjct: 185 IVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVKEYSSNGSLV 229
Score = 106 (42.4 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 39/163 (23%), Positives = 70/163 (42%)
Query: 171 SPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLT 230
S ++ VG ++ I + + + F G VTAL + G M+ SGS +
Sbjct: 73 SSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGS-MLASGSKDNDII 131
Query: 231 VWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIR 290
+W++ +++ HR VT FL LV+SS D L++W + ++I
Sbjct: 132 LWDVVGESGLFRLR-GHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQ----HCMQIV 186
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
GH + + +++ + D LR + K +SN +L
Sbjct: 187 SGHHSEVWSVDT-DPEERYVVTGSADQELRFYAVKEYSSNGSL 228
Score = 105 (42.0 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 38/168 (22%), Positives = 73/168 (43%)
Query: 417 CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGGVRGVVSDNLNQIVI 475
C I + ++G SG ++ +I S H G + + + +D+ + +
Sbjct: 450 CSLIVPQNKYGIVGTKSGVLEIIDIGSATKVEEVKAHG---GTIWSITPIPNDS-GFVTV 505
Query: 476 SGGNDQTVKVWHF--KQ-TGKPP-------LRSIKLDNGISFFRTHQESSMLAVCLDDFT 525
S D VK W + KQ +GK ++S+K+++ + ++ +AV L D T
Sbjct: 506 SA--DHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDST 563
Query: 526 VNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
V + +D+ L GH + D S D ++T S D +++W +
Sbjct: 564 VKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGL 611
Score = 100 (40.3 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 33/149 (22%), Positives = 67/149 (44%)
Query: 429 IGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF 488
+ ++ ++ ++++S + + ++Q GH VR V N +++S + + VK+W+
Sbjct: 377 LSLNNNSLEFYSLKSSENAKTVTIEHQ-GHRSDVRSVTLSEDNTLLMSTSHSE-VKIWN- 433
Query: 489 KQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLT 548
TG LR+I G+ Q + V + IIDI + T + ++ H G +
Sbjct: 434 PSTGSC-LRTIDSGYGLCSLIVPQNKYGI-VGTKSGVLEIIDIGSATKVEEVKAHGGTIW 491
Query: 549 DADFSPDSRWLITASMDCTIRVWDIPSSQ 577
P+ +T S D ++ W+ Q
Sbjct: 492 SITPIPNDSGFVTVSADHEVKFWEYQVKQ 520
Score = 78 (32.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVW--HFKQTGKPPLRSIKLDNGISFFR-THQE 513
GH V + + +++++G D+ +K+W F K G+ F R TH
Sbjct: 580 GHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHY- 638
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+ ++ D V D D + L GH ++ S +L+T S D ++R WD
Sbjct: 639 --LFSIGKDRL-VKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
Score = 44 (20.5 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 553 SPDSRWLITASMDCTIRVWDIPS 575
SPD++ + A +D T++V+ + S
Sbjct: 549 SPDAKHIAVALLDSTVKVFYMDS 571
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 116 (45.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 29/105 (27%), Positives = 53/105 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG +D T+ +W + KP R I+ +S ++A D ++ + D T
Sbjct: 346 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT 405
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ L GH+ + +S DSR L++ S D T++VWD+ + +L
Sbjct: 406 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKL 450
Score = 113 (44.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/123 (27%), Positives = 65/123 (52%)
Query: 213 RTDGPPMMVSGSNTGHLTVWN-LEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271
R GP +VSGS+ L +W+ ED++ ++ H+ ++ F + ++ ++S D +
Sbjct: 339 RGQGPERLVSGSDDFTLFLWSPAEDKKPLARMT-GHQALINQVLFSPDSRIVASASFDKS 397
Query: 272 LKLWIFDKADGN-GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
+KLW DG G+ L GH A I + +S ++S + DSTL++++ K++
Sbjct: 398 IKLW-----DGRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDVKAQKLT 451
Query: 331 KNL 333
+L
Sbjct: 452 TDL 454
Score = 102 (41.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 29/116 (25%), Positives = 55/116 (47%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF-FRTHQESS 515
GH + V+ ++IV S D+++K+W + TGK L S++ + +S
Sbjct: 372 GHQALINQVLFSPDSRIVASASFDKSIKLWDGR-TGKY-LASLRGHVAAVYQIAWSADSR 429
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+L D T+ + D+ + L GH ++ D+SPD + + + D +R+W
Sbjct: 430 LLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 94 (38.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 51/196 (26%), Positives = 84/196 (42%)
Query: 108 KGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKR-WNSC 164
+GH+ V + P G +L S ++ V+ WD+ E + F G R W
Sbjct: 113 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPH---------FTCKGHRHW--- 160
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI---QTWGPVTALSFRT--DGPPM 219
V + SP + G N +I+L + T + + W +T LS+ P
Sbjct: 161 VLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKW--ITGLSWEPLHMNPEC 218
Query: 220 --MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIF 277
+ S S G + VW+ + E +I H + VT + + LL ++S D T+K+W
Sbjct: 219 RYVASSSKDGSVRVWDTTAGRCE-RILTGHTQSVTCLRW-GGDGLLYSASQDRTIKVW-- 274
Query: 278 DKADGNGRLLRIREGH 293
+A +G L R +GH
Sbjct: 275 -RAH-DGVLCRTLQGH 288
Score = 56 (24.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
PGH V V Q V SGG D+ +++W
Sbjct: 455 PGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 51 (23.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328
EGHS + F + + S +GD+T+R ++ +ET
Sbjct: 113 EGHSEAVISVAF-SPTGKYLASGSGDTTVRFWDLSTET 149
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 122 (48.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 29/127 (22%), Positives = 59/127 (46%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWH-FKQTGKPPLRSIKLDNGISFFRTHQESSM 516
H VR V Q++++ D+++KVW F+Q L + + + + + +
Sbjct: 101 HTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSL--YRHTHWVRCAKFSPDGRL 158
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ C +D T+ I D + S +G DF+P+ + +A D +++WDI +
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMN 218
Query: 577 QLIDCFQ 583
+L+ +Q
Sbjct: 219 KLLQHYQ 225
Score = 111 (44.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 30/113 (26%), Positives = 48/113 (42%)
Query: 461 GVRGVVSDNLNQIVI-SGGNDQTVKVWHFKQTGKPPLRSIKLDN-GISFFRTHQESSMLA 518
G V N N I S G+D VK+W + L+ ++ + G++ H + L
Sbjct: 187 GFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKL--LQHYQVHSCGVNCLSFHPLGNSLV 244
Query: 519 VCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
D TV ++D+ +I L GH G + FS D L + D + +W
Sbjct: 245 TASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 99 (39.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 36/128 (28%), Positives = 63/128 (49%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
VT+L F G ++ S S + +W L DR+ ++ KAH V F + LLVT+
Sbjct: 63 VTSLQFSPQGN-LLASASRDRTVRLWVL-DRKGKSSEFKAHTAPVRSVDFSADGQLLVTA 120
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDSTLRIFNT 324
S D ++K+W + R L H+ ++++ S D I+S + D T++I++T
Sbjct: 121 SEDKSIKVWSMFRQ----RFLYSLYRHT---HWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 325 KSETSNKN 332
++ N
Sbjct: 174 TNKQCVNN 181
Score = 95 (38.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 50/223 (22%), Positives = 96/223 (43%)
Query: 106 TYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLEL-SFDNDT--FKIMGKRWN 162
++KGH + + F P+ + S WD T+L L S ++ +G +
Sbjct: 13 SFKGHKAAI-TSADFSPNCKQIATAS----WD-----TFLMLWSLKPHARAYRYVGHK-- 60
Query: 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS 222
V L+ SP +++ ++ + L + EF PV ++ F DG ++V+
Sbjct: 61 DVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQ-LLVT 119
Query: 223 GSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG 282
S + VW++ ++ + + H V A F + L+V+ S D T+K+W D
Sbjct: 120 ASEDKSIKVWSMFRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTT-- 174
Query: 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
N + + N++ F N + I SA D ++I++ +
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPNGTC-IASAGSDHAVKIWDIR 216
Score = 94 (38.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 28/113 (24%), Positives = 51/113 (45%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS-FFRTHQESSMLAVCLDDFTVNIID 530
++++S D+T+K+W T K + + G + F + + +A D V I D
Sbjct: 157 RLIVSCSEDKTIKIWD--TTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWD 214
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
I +++ H + F P L+TAS D T+++ D+ +LI Q
Sbjct: 215 IRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQ 267
Score = 78 (32.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 29/90 (32%), Positives = 42/90 (46%)
Query: 234 LEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH 293
LED +E K H+ +T A F N + T+S D L LW + R R GH
Sbjct: 5 LEDPILERSFK-GHKAAITSADFSPNCKQIATASWDTFLMLWSLKP---HARAYRY-VGH 59
Query: 294 SAPPNYIQFYGNSSDNIL-SAAGDSTLRIF 322
+QF + N+L SA+ D T+R++
Sbjct: 60 KDVVTSLQF--SPQGNLLASASRDRTVRLW 87
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 143 (55.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 45/128 (35%), Positives = 68/128 (53%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK--PPLRSIKLDNGISFFRTHQES 514
GH GVR +V DN Q +ISGG D T+KVW++ TG+ R + D +S T++
Sbjct: 421 GHTKGVRALVFDN--QKLISGGLDSTIKVWNY-HTGQCIATYRGHE-DAVVSVDFTNK-- 474
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
S+++ D TV + +D+ T L GH + S + +AS D TIR+WD+
Sbjct: 475 SIVSGSADH-TVRVWHVDSRTCYT-LRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMN 532
Query: 575 SSQLIDCF 582
S++ I F
Sbjct: 533 SNECIKVF 540
Score = 99 (39.9 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 30/115 (26%), Positives = 55/115 (47%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
++SG + VWN Q + H V F N+ + V+ S D+T+++W D
Sbjct: 436 LISGGLDSTIKVWNYHTGQCIATYR-GHEDAVVSVDFT-NKSI-VSGSADHTVRVWHVDS 492
Query: 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLG 334
R GH+ N+++ + ++S+ I SA+ D+T+R+++ S K G
Sbjct: 493 -----RTCYTLRGHTDWVNHVKIH-SASNTIFSASDDTTIRMWDMNSNECIKVFG 541
Score = 82 (33.9 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 72 HEDDITCLSSDFFHIYT-SANNIIYAWRRGI-DIVGTYKGHTSPVHLILPFGPHLISVDE 129
H D +TCL + ++ T S + I W+ + V T GHT V ++ LIS
Sbjct: 382 HSDGVTCLQFNRKYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQKLISGGL 441
Query: 130 ESNVKVWD 137
+S +KVW+
Sbjct: 442 DSTIKVWN 449
Score = 75 (31.5 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 455 QPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK 493
Q GH+ GV + +D +ISG +D+ +KVW Q GK
Sbjct: 664 QFGHIEGVWSIAADTFR--IISGAHDRLIKVWDL-QNGK 699
Score = 70 (29.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 86 IYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFG-PHLISVDEESNVKVWDIKAEE 142
+Y+ + WR+G + T+ GH+ V L F +L++ ++ +K+W I + E
Sbjct: 358 VYSERFKLEKNWRKGTHTIKTFTGHSDGV-TCLQFNRKYLMTGSYDTTIKIWKIDSGE 414
Score = 65 (27.9 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
L LD+ T+ + D+ T IR GH+ + + D+ +I+ + D I+VWD+ +
Sbjct: 642 LTSALDN-TIKLWDVATGKCIRTQFGHIEGVWS--IAADTFRIISGAHDRLIKVWDLQNG 698
Query: 577 QLIDCF 582
+ + F
Sbjct: 699 KCLHTF 704
Score = 54 (24.1 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 525 TVNI-IDIDTCTIIRKL--SGHMGQLTDADFSPDS--RWLITASMDCTIRVWDIPSSQLI 579
T NI + DT TI R + T A +P+S +T+++D TI++WD+ + + I
Sbjct: 603 TNNISLPNDTATINRSTFTPSNNNTATTAT-TPNSYPTHFLTSALDNTIKLWDVATGKCI 661
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 167 (63.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 40/116 (34%), Positives = 62/116 (53%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSML 517
H G VRGV N + +SGG+D +KVW++K T + + + I + H E+ +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYK-THRCLFTLLGHLDYIRTVQFHHENPWI 108
Query: 518 AVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
DD T+ I + + T I L+GH + A F P +++AS+D T+RVWDI
Sbjct: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 114 (45.2 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 35/122 (28%), Positives = 61/122 (50%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
V LSF P ++ S ++G + +W+ + ++ + H V G HF ++PL V+
Sbjct: 12 VKGLSFHPKRPWILAS-LHSGVIQLWDYRMGTLIDRFDE-HEGPVRGVHFHNSQPLFVSG 69
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
D +K+W + R L GH +QF+ + + I+SA+ D T+RI+N +S
Sbjct: 70 GDDYKIKVWNYK----THRCLFTLLGHLDYIRTVQFH-HENPWIVSASDDQTIRIWNWQS 124
Query: 327 ET 328
T
Sbjct: 125 RT 126
Score = 70 (29.7 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWL 559
D G+++ H ++ DD V + ++ + L GHM ++ F +
Sbjct: 204 DRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDII 263
Query: 560 ITASMDCTIRVWDIPSSQLIDCFQ 583
++ S D +IRVWD I F+
Sbjct: 264 VSNSEDKSIRVWDATKRTGIQTFR 287
Score = 69 (29.3 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 19/72 (26%), Positives = 33/72 (45%)
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF-KQTGKPPLRSIKLDNGISFFRTH 511
D GH+ V V+ I++S D++++VW K+TG R + + H
Sbjct: 242 DTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFR--REHDRFWILAVH 299
Query: 512 QESSMLAVCLDD 523
E ++LA D+
Sbjct: 300 PEINLLAAGHDN 311
Score = 66 (28.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/75 (21%), Positives = 35/75 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH GV +++SG +D+ VK+W +T + +++ N +S H +
Sbjct: 202 GHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQD 261
Query: 516 MLAVCLDDFTVNIID 530
++ +D ++ + D
Sbjct: 262 IIVSNSEDKSIRVWD 276
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 138 (53.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 36/120 (30%), Positives = 62/120 (51%)
Query: 457 GHVGGVRGV-VSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRT--HQE 513
GH+ V N+N + +G ND++ ++W QTGK +R I + + + +
Sbjct: 761 GHLSDCNTVRFHPNINYLA-TGSNDKSARLWEI-QTGKC-VR-IFMGHRAPIYTVAFSPD 816
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+LA +D +V + D+ T ++K+ GH + DFS D L + S DCT+R+WD+
Sbjct: 817 GRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDV 876
Score = 128 (50.1 bits), Expect = 0.00018, P = 0.00018
Identities = 44/178 (24%), Positives = 79/178 (44%)
Query: 107 YKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSC 164
YKGH PV + PFG + + + ++W T +S +I + C
Sbjct: 717 YKGHNFPVWDVSFSPFGFYFATASHDRTARLW------TTNHIS----PLRIFTGHLSDC 766
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS 224
N + P ++ + G ++K L I T + + F+ P+ ++F DG + +G
Sbjct: 767 -NTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGE 825
Query: 225 NTGHLTVWNLEDRQVENQIKK--AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA 280
+T + +W+L + ++KK H K V F + +L + S D T++LW KA
Sbjct: 826 DTS-VILWDLSTGK---KVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVKKA 879
Score = 106 (42.4 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 27/105 (25%), Positives = 48/105 (45%)
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESSMLAVCLDDFTVNIIDIDTC 534
+ +D+T ++W PLR + + R H + LA +D + + +I T
Sbjct: 738 TASHDRTARLWTTNHIS--PLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTG 795
Query: 535 TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+R GH + FSPD R L TA D ++ +WD+ + + +
Sbjct: 796 KCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKV 840
Score = 77 (32.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 40 RRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRR 99
+++KE+ F T +G + VYGC S SP + ++C S D T+A +++
Sbjct: 665 KQQKESEFKTFLGHSGPVYGC------SFSPDSQYLLSC-SED-----TTAR--LWSMET 710
Query: 100 GIDIVGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVW 136
++V YKGH PV + PFG + + + ++W
Sbjct: 711 MSNLV-CYKGHNFPVWDVSFSPFGFYFATASHDRTARLW 748
Score = 67 (28.6 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 27/103 (26%), Positives = 45/103 (43%)
Query: 225 NTGHLTVWN-LEDRQVENQIKK--AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
N+G + N L+ +Q E++ K H V G F + L++ S D T +LW +
Sbjct: 653 NSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMS 712
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
L +GH+ P + F +A+ D T R++ T
Sbjct: 713 N----LVCYKGHNFPVWDVSF-SPFGFYFATASHDRTARLWTT 750
Score = 57 (25.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 106 TYKGHTSPVH--LILPFGPHLISVDEESNVKVWDIK 139
T+ GH+ PV+ P +L+S E++ ++W ++
Sbjct: 674 TFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSME 709
Score = 45 (20.9 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 303 YGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
+ +S+ + SA S N KS T+N NL S+
Sbjct: 622 FASSASSASSAMNGSGNNNENNKSTTANNNLNSGSS 657
Score = 38 (18.4 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 5/10 (50%), Positives = 10/10 (100%)
Query: 130 ESNVKVWDIK 139
+S+VK+W++K
Sbjct: 579 DSSVKIWNLK 588
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/120 (35%), Positives = 60/120 (50%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR---THQE 513
GH+G VR + + NQ ++G D+T+K+W +GK L+ + L IS R
Sbjct: 206 GHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLA-SGK--LK-LSLTGHISTVRGVAVSNR 261
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
S L C +D V D++ +IR GH+ + D D P L+T S D T RVWDI
Sbjct: 262 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDI 321
Score = 122 (48.0 bits), Expect = 0.00036, P = 0.00036
Identities = 34/119 (28%), Positives = 50/119 (42%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH+ VRGV N + + S G D+ VK W + +R + + H
Sbjct: 248 GHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYN--KVIRHYHGHLSAVYDLDLHPTID 305
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITA-SMDCTIRVWDI 573
+L C D T + DI T + LSGH + ++T S D TIR+WD+
Sbjct: 306 VLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDL 364
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 161 (61.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 43/197 (21%), Positives = 99/197 (50%)
Query: 394 KSKMDDMFLVP--ERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYG 451
K + ++M+ + K ++S C + G +++ G G ++ +N +G R
Sbjct: 194 KDQEEEMYPTQLFRQIKFGQKSHVECAQFSPDGQYLITGSVDGFLEVWNFTTGKVRKDLK 253
Query: 452 HDNQPGHVGGVRGVVSDNLN---QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN--GIS 506
+ Q + + V++ N + ++V SG D +KVW TG+ LR + + GI+
Sbjct: 254 YQAQDQFMMMEQAVLALNFSRDSEMVASGAQDGQIKVWRII-TGQC-LRKFEKAHTKGIT 311
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDC 566
+ +++S + D+TV + + + ++++ GH + +A F+PD +++AS D
Sbjct: 312 CLQFSRDNSQVLSASFDYTVRLHGLKSGKMLKEFKGHSSFVNEATFTPDGHSVLSASSDG 371
Query: 567 TIRVWDIPSSQLIDCFQ 583
T++VW + +++ + ++
Sbjct: 372 TVKVWSLKTTECVATYK 388
Score = 132 (51.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 36/128 (28%), Positives = 69/128 (53%)
Query: 199 EFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLY 258
+F+ V AL+F D M+ SG+ G + VW + Q + +KAH K +T F
Sbjct: 259 QFMMMEQAVLALNFSRDSE-MVASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFSR 317
Query: 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDST 318
+ ++++S D T++L +G++L+ +GHS+ N F + ++LSA+ D T
Sbjct: 318 DNSQVLSASFDYTVRLHGLK----SGKMLKEFKGHSSFVNEATFTPDGH-SVLSASSDGT 372
Query: 319 LRIFNTKS 326
+++++ K+
Sbjct: 373 VKVWSLKT 380
Score = 45 (20.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 16/66 (24%), Positives = 30/66 (45%)
Query: 187 ILHNILTDESLMEFIQTWGPVTALSFRT-DGPPMMVSGSNTGHLTVWNLEDRQVENQIKK 245
++ L + +LM+ +QT T +S T D V + GH W+ +V +K
Sbjct: 13 LIQQYLKESNLMKTLQTLQEETGVSLNTVDSVDGFVQDISNGH---WDTV-LKVTQSLKL 68
Query: 246 AHRKVV 251
+K++
Sbjct: 69 PDKKLL 74
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 116 (45.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/113 (26%), Positives = 54/113 (47%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQES-SMLAVCLDDFTVNIID 530
++++S D+T+K+W T K + + G + F S + +A D TV + D
Sbjct: 115 RLIVSCSEDKTIKIWD--TTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWD 172
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
+ +++ H G + F P +LITAS D T+++ D+ +LI Q
Sbjct: 173 VRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ 225
Score = 105 (42.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNIIDID 532
+ S G+DQTVKVW + K L+ ++ +G ++ H + L D T+ I+D+
Sbjct: 159 IASAGSDQTVKVWDVR-VNKL-LQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLL 216
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+I L GH G + FS + D + +W
Sbjct: 217 EGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 255
Score = 91 (37.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
H+ VVT F + LL ++S D T++LWI DK G+ + H+AP + F +
Sbjct: 17 HKDVVTSVQFSPHGNLLASASRDRTVRLWIPDK---RGKFSEFK-AHTAPVRSVDFSADG 72
Query: 307 SDNILSAAGDSTLRIFN 323
+ +A+ D ++++++
Sbjct: 73 QF-LATASEDKSIKVWS 88
Score = 80 (33.2 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 31/128 (24%), Positives = 60/128 (46%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
VT++ F G ++ S S + +W + D++ + KAH V F + L T+
Sbjct: 21 VTSVQFSPHGN-LLASASRDRTVRLW-IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATA 78
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDSTLRIFNT 324
S D ++K+W + R L H+ ++++ S D I+S + D T++I++T
Sbjct: 79 SEDKSIKVWSMYRQ----RFLYSLYRHT---HWVRCAKFSPDGRLIVSCSEDKTIKIWDT 131
Query: 325 KSETSNKN 332
++ N
Sbjct: 132 TNKQCVNN 139
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 124 (48.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 30/127 (23%), Positives = 59/127 (46%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWH-FKQTGKPPLRSIKLDNGISFFRTHQESSM 516
H VR V Q +++ D+++KVW ++Q L + + + + + +
Sbjct: 101 HTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSL--YRHTHWVRCAKFSPDGRL 158
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ C +D T+ I D + + S +G DFSP+ + +A D +R+WDI +
Sbjct: 159 IVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMN 218
Query: 577 QLIDCFQ 583
+L+ +Q
Sbjct: 219 RLLQHYQ 225
Score = 110 (43.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 26/106 (24%), Positives = 46/106 (43%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDN-GISFFRTHQESSMLAVCLDDFTVNIIDID 532
+ S G+D V++W + L+ ++ + G++ H + L D TV I+D+
Sbjct: 201 IASAGSDHAVRIWDIRMNRL--LQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLV 258
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+I L GH G + FS D + D + VW +Q+
Sbjct: 259 EGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRTSFNQV 304
Score = 99 (39.9 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 28/113 (24%), Positives = 50/113 (44%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS-FFRTHQESSMLAVCLDDFTVNIID 530
++++S D+T+K+W T K + + G + F + +A D V I D
Sbjct: 157 RLIVSCSEDKTIKIWD--TTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWD 214
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
I +++ H + F P L+TAS D T+++ D+ +LI Q
Sbjct: 215 IRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQ 267
Score = 98 (39.6 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 36/128 (28%), Positives = 62/128 (48%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
VT+L F G ++ S S + +W L DR+ ++ KAH V F + LVT+
Sbjct: 63 VTSLQFSPQGN-LLASASRDKTVRLWVL-DRKGKSSEFKAHTAPVRSVDFSADGQFLVTA 120
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDSTLRIFNT 324
S D ++K+W + R L H+ ++++ S D I+S + D T++I++T
Sbjct: 121 SEDKSIKVWSMYRQ----RFLYSLYRHT---HWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 325 KSETSNKN 332
S+ N
Sbjct: 174 TSKQCVNN 181
Score = 93 (37.8 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 26/117 (22%), Positives = 58/117 (49%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+T+ F + + + +T L +W+L+ + H+ VVT F LL ++
Sbjct: 21 ITSADFSPNCKQIATASWDT-FLMLWSLKPHARAYRYV-GHKDVVTSLQFSPQGNLLASA 78
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
S D T++LW+ D+ G+ + H+AP + F + +++A+ D ++++++
Sbjct: 79 SRDKTVRLWVLDR---KGKSSEFK-AHTAPVRSVDFSADGQF-LVTASEDKSIKVWS 130
Score = 74 (31.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 28/89 (31%), Positives = 41/89 (46%)
Query: 235 EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS 294
ED +E K H+ +T A F N + T+S D L LW + R R GH
Sbjct: 6 EDPILERYFK-GHKAAITSADFSPNCKQIATASWDTFLMLWSLKP---HARAYRY-VGHK 60
Query: 295 APPNYIQFYGNSSDNIL-SAAGDSTLRIF 322
+QF + N+L SA+ D T+R++
Sbjct: 61 DVVTSLQF--SPQGNLLASASRDKTVRLW 87
>UNIPROTKB|G4MTR1 [details] [associations]
symbol:MGG_04746 "DOM34-interacting protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR007148 Pfam:PF04003 KO:K14556 RefSeq:XP_003713707.1
ProteinModelPortal:G4MTR1 EnsemblFungi:MGG_04746T0 GeneID:2678069
KEGG:mgr:MGG_04746 Uniprot:G4MTR1
Length = 968
Score = 138 (53.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 42/161 (26%), Positives = 75/161 (46%)
Query: 427 VLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
V++G +G ++ F++ S A D+ H G + + + V++G D++ K W
Sbjct: 485 VVVGTKTGELELFDVASTALL-----DSVTAHDGAIWSLHVHPDGRSVVTGSADKSAKFW 539
Query: 487 HFKQTGKPPL--------------RSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532
F+ +P L R +K+ + I + ++ MLAV L D TV + D
Sbjct: 540 DFRIVQEPVLGTTRTTPKLKLVQTRVLKVSDDILSLKFSPDAKMLAVALLDSTVKVFFAD 599
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ + L GH + D S DS+ +IT+S D I++W +
Sbjct: 600 SLKLYLNLYGHKLPVLSMDISYDSKLIITSSADKNIKIWGL 640
Score = 76 (31.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 27/113 (23%), Positives = 44/113 (38%)
Query: 175 DIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL 234
D+ VG + I L + ++ F +T L+F G + SGS + VW+L
Sbjct: 81 DVFAVGYEDGSIRLWDSKIATIIVSFNGHRTAITHLAFDKSGT-RLASGSKDTDVIVWDL 139
Query: 235 EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLL 287
+V + H+ +TG F+ EP + + D G LL
Sbjct: 140 V-AEVGQYKLRGHKDQITGLCFIEPEPQTAEQEDAEEAQAMVVDNEGSEGFLL 191
Score = 61 (26.5 bits), Expect = 4.9e-08, Sum P(4) = 4.9e-08
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 94 IYAWRRGI-DIVGTYKGH-TSPVHLILP-FGPHLISVDEESNVKVWDIKAE 141
I W I I+ ++ GH T+ HL G L S ++++V VWD+ AE
Sbjct: 92 IRLWDSKIATIIVSFNGHRTAITHLAFDKSGTRLASGSKDTDVIVWDLVAE 142
Score = 53 (23.7 bits), Expect = 4.9e-08, Sum P(4) = 4.9e-08
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 264 VTSSPDNTLKLWIFDKADGNGRLLRIR-EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322
VT++ D K + A+ R L I GH A I +S D +L+ A + +L+I+
Sbjct: 401 VTTTKDKEKKSKK-ENAEDYTRALSIELPGHRADIRAIAL--SSDDRMLATAANGSLKIW 457
Query: 323 NTKSE 327
N +++
Sbjct: 458 NVRTQ 462
Score = 47 (21.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 61 NHFKLLSVS-PQHEDDITC--LSSDFFHIYTSANNIIYAW 97
++ + LS+ P H DI LSSD + T+AN + W
Sbjct: 418 DYTRALSIELPGHRADIRAIALSSDDRMLATAANGSLKIW 457
Score = 43 (20.2 bits), Expect = 6.9e-07, Sum P(3) = 6.9e-07
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 259 NEPLLVTSSPDNTLKLW 275
+E L+T++ D+ +KLW
Sbjct: 186 SEGFLLTTAKDSLIKLW 202
Score = 41 (19.5 bits), Expect = 4.9e-08, Sum P(4) = 4.9e-08
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 202 QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
QT G AL D + +G N G L VW ++
Sbjct: 216 QTNGECWALGVNPDFSCCVTAG-NDGELKVWFID 248
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 229 LTVWNLEDRQ-VENQIKKAHRKV-VTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
+ +W+L R +E + + + + G + ++ VT+ D LK+W D
Sbjct: 199 IKLWDLSSRFCIETHVAQTNGECWALGVNPDFS--CCVTAGNDGELKVWFID 248
Score = 38 (18.4 bits), Expect = 8.4e-06, Sum P(4) = 8.4e-06
Identities = 5/17 (29%), Positives = 13/17 (76%)
Query: 124 LISVDEESNVKVWDIKA 140
L++ ++S +K+WD+ +
Sbjct: 190 LLTTAKDSLIKLWDLSS 206
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 116 (45.9 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 29/105 (27%), Positives = 53/105 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG +D T+ +W + KP R I+ +S ++A D ++ + D T
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT 403
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ L GH+ + +S DSR L++ S D T++VWD+ + +L
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKL 448
Score = 112 (44.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 33/117 (28%), Positives = 63/117 (53%)
Query: 213 RTDGPPMMVSGSNTGHLTVWN-LEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271
R GP +VSGS+ L +W+ ED++ ++ H+ ++ F + ++ ++S D +
Sbjct: 337 RGQGPERLVSGSDDFTLFLWSPAEDKKPLARMT-GHQALINQVLFSPDSRIVASASFDKS 395
Query: 272 LKLWIFDKADGN-GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
+KLW DG G+ L GH A I + +S ++S + DSTL++++ K++
Sbjct: 396 IKLW-----DGRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDVKAQ 446
Score = 102 (41.0 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 29/116 (25%), Positives = 55/116 (47%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF-FRTHQESS 515
GH + V+ ++IV S D+++K+W + TGK L S++ + +S
Sbjct: 370 GHQALINQVLFSPDSRIVASASFDKSIKLWDGR-TGKY-LASLRGHVAAVYQIAWSADSR 427
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+L D T+ + D+ + L GH ++ D+SPD + + + D +R+W
Sbjct: 428 LLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 91 (37.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 50/196 (25%), Positives = 84/196 (42%)
Query: 108 KGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKR-WNSC 164
+GH+ V + P G +L S ++ V+ WD+ E + F G R W
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPH---------FTCKGHRHW--- 158
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI---QTWGPVTALSFRT--DGPPM 219
V + SP + G N +++L + T + + W +T LS+ P
Sbjct: 159 VLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKW--ITGLSWEPLHMNPEC 216
Query: 220 --MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIF 277
+ S S G + VW+ + E +I H + VT + + LL ++S D T+K+W
Sbjct: 217 RYVASSSKDGSVRVWDTTAGRCE-RILTGHTQSVTCLRW-GGDGLLYSASQDRTIKVW-- 272
Query: 278 DKADGNGRLLRIREGH 293
+A +G L R +GH
Sbjct: 273 -RAH-DGVLCRTLQGH 286
Score = 56 (24.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
PGH V V Q V SGG D+ +++W
Sbjct: 453 PGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 51 (23.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328
EGHS + F + + S +GD+T+R ++ +ET
Sbjct: 111 EGHSEAVISVAF-SPTGKYLASGSGDTTVRFWDLSTET 147
>DICTYBASE|DDB_G0267982 [details] [associations]
symbol:copA "coatomer protein complex alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
Uniprot:Q55FR9
Length = 1221
Score = 165 (63.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 39/117 (33%), Positives = 63/117 (53%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSM 516
H G VRG+ + +SGG+D +KVW++KQ + L ++K I H+E+
Sbjct: 50 HEGPVRGINFHMTQPLFVSGGDDYKIKVWNYKQ--RRCLFTLKGHKDYIRSVEFHREAPW 107
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ DD + I + + T I +L+GH + A F P +++AS+D TIR+WDI
Sbjct: 108 IVSSSDDMVIRIWNWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIWDI 164
Score = 122 (48.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 42/163 (25%), Positives = 73/163 (44%)
Query: 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS 222
S V L P I L + I L++ L +F + GPV ++F P+ VS
Sbjct: 10 SRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFHMT-QPLFVS 68
Query: 223 GSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG 282
G + + VWN + R+ +K H+ + F P +V+SS D +++W +
Sbjct: 69 GGDDYKIKVWNYKQRRCLFTLK-GHKDYIRSVEFHREAPWIVSSSDDMVIRIWNWQSRTC 127
Query: 283 NGRLLRIREGHSAPPNYIQ--FYGNSSDNILSAAGDSTLRIFN 323
L GH+ +Y+ + D ++SA+ D T+RI++
Sbjct: 128 IAEL----NGHN---HYVMSALFHPKDDLVVSASLDQTIRIWD 163
Score = 100 (40.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 33/124 (26%), Positives = 62/124 (50%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKK--AHRKVVTGAHFLYNEPLLV 264
V LSF P ++ S ++G + +L D +++ ++K H V G +F +PL V
Sbjct: 12 VKGLSFHPTRPWILAS-LHSGSI---HLYDYRIKTLLEKFDEHEGPVRGINFHMTQPLFV 67
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
+ D +K+W + + R L +GH ++F+ + I+S++ D +RI+N
Sbjct: 68 SGGDDYKIKVWNYKQR----RCLFTLKGHKDYIRSVEFH-REAPWIVSSSDDMVIRIWNW 122
Query: 325 KSET 328
+S T
Sbjct: 123 QSRT 126
Score = 86 (35.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLIT 561
D G+++ H + DD V + ++ I+ GH ++ A F P +I+
Sbjct: 204 DRGVNWASFHPTQPYIVSASDDHQVKLWRMND-PIVDTFRGHYNNVSCALFHPRQDLIIS 262
Query: 562 ASMDCTIRVWDI 573
S D TIRVWDI
Sbjct: 263 NSEDKTIRVWDI 274
Score = 72 (30.4 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 26/127 (20%), Positives = 58/127 (45%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH V + + +V+S DQT+++W K + ++K ++E+
Sbjct: 133 GHNHYVMSALFHPKDDLVVSASLDQTIRIWDISGL-KKKMTTVK---------PYRENDP 182
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ + + F +I ++ L GH + A F P ++++AS D +++W + +
Sbjct: 183 MRLQDELFGTDI------SVRLSLEGHDRGVNWASFHPTQPYIVSASDDHQVKLWRM-ND 235
Query: 577 QLIDCFQ 583
++D F+
Sbjct: 236 PIVDTFR 242
Score = 53 (23.7 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
D GH V + ++IS D+T++VW
Sbjct: 239 DTFRGHYNNVSCALFHPRQDLIISNSEDKTIRVW 272
Score = 40 (19.1 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 523 DFTVNIIDIDTCTIIRKLS 541
+F II+IDT + KLS
Sbjct: 577 EFKNRIIEIDTTEYVLKLS 595
>FB|FBgn0034876 [details] [associations]
symbol:wmd "wing morphogenesis defect" species:7227
"Drosophila melanogaster" [GO:0005102 "receptor binding"
evidence=ISS] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007476 GeneTree:ENSGT00630000089849 KO:K13137 OMA:LWQTTVG
EMBL:AY061000 RefSeq:NP_001097436.1 RefSeq:NP_611804.1
UniGene:Dm.3756 SMR:Q9W1N4 STRING:Q9W1N4 EnsemblMetazoa:FBtr0072114
EnsemblMetazoa:FBtr0113112 GeneID:37727 KEGG:dme:Dmel_CG3957
UCSC:CG3957-RA CTD:37727 FlyBase:FBgn0034876 InParanoid:Q9W1N4
OrthoDB:EOG4QBZMZ ChiTaRS:wmd GenomeRNAi:37727 NextBio:805102
Uniprot:Q9W1N4
Length = 328
Score = 106 (42.4 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 28/107 (26%), Positives = 47/107 (43%)
Query: 465 VVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDF 524
+ SDN + + IS G+ ++ W K L+ +K+ ++ H + + +DF
Sbjct: 195 ISSDN-HILTISHGS--SISFWEIDTLKK--LKEVKVPTNVASASLHPDKHVFVCGGEDF 249
Query: 525 TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ D T I GH G + FSPD + S D T+R+W
Sbjct: 250 KMYKFDYITGNEIESFKGHFGPVHSVKFSPDGELYASGSEDGTLRLW 296
Score = 96 (38.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 59/224 (26%), Positives = 103/224 (45%)
Query: 106 TYKGHTSPV-HL----ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFK-IMGK 159
T GHT PV HL I G LIS ++ + ++ +T + TF+ G
Sbjct: 12 TCSGHTRPVVHLDFSDICDAGYFLISACKDGSPM---LRHGDTGDWVG----TFEGHKGA 64
Query: 160 RWNSCVN---VLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDG 216
WN+ +N L S D G K+ N +T + F Q V +++F D
Sbjct: 65 VWNATLNRNATLAASGAADFTG------KV--WNAVTGAEIHSF-QHKHIVKSVAFDRDS 115
Query: 217 PPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWI 276
+ V+GSN + V+NLE + + + H + A F + +++++ D T++LW
Sbjct: 116 ENI-VTGSNEKLVRVFNLEQPEAQPEEYAGHTGAIKRALFCRGDKCIISAAEDKTVRLW- 173
Query: 277 FDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN-ILSAAGDSTL 319
D+ G + R++ ++ PN ++ SSDN IL+ + S++
Sbjct: 174 -DRMTGI-EVQRLQ--FNSNPNSLEI---SSDNHILTISHGSSI 210
Score = 52 (23.4 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 18/79 (22%), Positives = 33/79 (41%)
Query: 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304
+ H+ V A N L + + D T K+W A + + H + F
Sbjct: 59 EGHKGAVWNATLNRNATLAASGAADFTGKVW---NAVTGAEIHSFQHKHIVKS--VAF-D 112
Query: 305 NSSDNILSAAGDSTLRIFN 323
S+NI++ + + +R+FN
Sbjct: 113 RDSENIVTGSNEKLVRVFN 131
Score = 38 (18.4 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 102 DIVGTYKGHTSPV 114
D VGT++GH V
Sbjct: 53 DWVGTFEGHKGAV 65
>ASPGD|ASPL0000054401 [details] [associations]
symbol:AN0305 species:162425 "Emericella nidulans"
[GO:0034388 "Pwp2p-containing subcomplex of 90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676
GO:GO:0030529 EMBL:AACD01000006 InterPro:IPR007148 Pfam:PF04003
HOGENOM:HOG000212524 KO:K14556 OMA:SIFAHDD OrthoDB:EOG4N07P3
RefSeq:XP_657909.1 ProteinModelPortal:Q5BGM5 STRING:Q5BGM5
EnsemblFungi:CADANIAT00002409 GeneID:2876084 KEGG:ani:AN0305.2
Uniprot:Q5BGM5
Length = 963
Score = 131 (51.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 47/163 (28%), Positives = 80/163 (49%)
Query: 427 VLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKV 485
V++G G ++ F+I S + HD G V ++ V D + ++SG D++ K
Sbjct: 479 VVVGNKDGELEIFDIASSTLLDTIKAHD---GPVWSLQ-VHPDGKS--LVSGSADKSAKF 532
Query: 486 WHF----------KQTGKPPLR-----SIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
W+F K+T P LR ++K+ + I R ++ +LAV L D TV +
Sbjct: 533 WNFQVVQEEIPGTKRT-TPRLRLVHTRTLKVSDDILSVRFSPDARLLAVALLDNTVKVFF 591
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
D+ + L GH + + D S DS+ ++T S D T+R+W +
Sbjct: 592 NDSLKLFLNLYGHKLPVLNMDISWDSKLIVTCSADKTVRLWGL 634
Score = 97 (39.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 30/113 (26%), Positives = 54/113 (47%)
Query: 471 NQIVISGGNDQTVKVW--HFKQTGKPPLRSIKLDNGISFFRTHQESS---MLAVCLDDFT 525
++++++ D+TV++W F K L ++F ++ E + +V D
Sbjct: 617 SKLIVTCSADKTVRLWGLDFGDCHKSFLAHEDSIMAVAFVPSNNEGNGHNFFSVSKDR-V 675
Query: 526 VNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ D D I+KLSGH G++ S +++TAS D +IR W+ QL
Sbjct: 676 IKYWDGDKFEHIQKLSGHHGEIWAMAISHTGEFIVTASHDKSIRTWEQTDEQL 728
Score = 95 (38.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 28/118 (23%), Positives = 57/118 (48%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGI-SFFRTHQES 514
PGH +R V + ++++ S N ++KVW+ + LR+++ + S F +
Sbjct: 422 PGHRTDIRSVALSSDDRMLASASNG-SLKVWNVRTQNC--LRTLECGYALCSAFLPGDK- 477
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ V D + I DI + T++ + H G + PD + L++ S D + + W+
Sbjct: 478 -IVVVGNKDGELEIFDIASSTLLDTIKAHDGPVWSLQVHPDGKSLVSGSADKSAKFWN 534
Score = 82 (33.9 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 39/148 (26%), Positives = 65/148 (43%)
Query: 147 LSFDNDTFKIMGKRW--NSC---VNVLEPSPV-VDIIGVGLSNKKIILHNILTDESLMEF 200
L +D +++G RW ++C V V+ S DI VG + I L + T+ ++ F
Sbjct: 53 LCWDIKKGELLG-RWKDSACRAQVTVITQSKTDEDIFAVGYEDGSIRLWDSRTETVMISF 111
Query: 201 IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLY-- 258
+T L+F G + SGS ++ +W+L +V + H +T HFL
Sbjct: 112 NGHKSAITQLAFDNAGV-RLASGSRDTNIILWDLIS-EVGLFKLRGHTDQITSLHFLVPT 169
Query: 259 ----NEP-------LLVTSSPDNTLKLW 275
NE L+T+ D +K+W
Sbjct: 170 LELLNEAGLSEHAGFLITTGKDALIKVW 197
Score = 61 (26.5 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 32/151 (21%), Positives = 64/151 (42%)
Query: 94 IYAW-RRGIDIVGTYKGHTSPVHLILPF---GPHLISVDEESNVKVWDIKAEETYLELSF 149
I W R ++ ++ GH S + L F G L S ++N+ +WD+ +E +L
Sbjct: 97 IRLWDSRTETVMISFNGHKSAITQ-LAFDNAGVRLASGSRDTNIILWDLISEVGLFKLRG 155
Query: 150 DNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNI--LTDESLME--FIQTWG 205
D + + + +L + + + G ++ K L + L + +E Q+ G
Sbjct: 156 HTDQITSLHFLVPT-LELLNEAGLSEHAGFLITTGKDALIKVWDLASQHCIETHIAQSNG 214
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLED 236
+L D ++G N G L W++++
Sbjct: 215 ECWSLGLAPDQSGC-ITGGNDGELKAWSIDE 244
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 32/157 (20%), Positives = 69/157 (43%)
Query: 129 EESNVKVWDIKAEETYLELSFDNDTFKIMGKRW-NSCVNVLEPSPVVDIIGVGLSNKKII 187
E+ ++++WD + E T + +SF+ I + N+ V + S +II L ++ +
Sbjct: 93 EDGSIRLWDSRTE-TVM-ISFNGHKSAITQLAFDNAGVRLASGSRDTNIILWDLISE-VG 149
Query: 188 LHNIL--TDE--SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ-VENQ 242
L + TD+ SL + T + ++ +G + + VW+L + +E
Sbjct: 150 LFKLRGHTDQITSLHFLVPTLELLNEAGLSEHAGFLITTGKDA-LIKVWDLASQHCIETH 208
Query: 243 IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
I +++ + + ++ +T D LK W D+
Sbjct: 209 IAQSNGECWS-LGLAPDQSGCITGGNDGELKAWSIDE 244
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 117 (46.2 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 63/281 (22%), Positives = 122/281 (43%)
Query: 64 KLLSVSPQHEDDITC--LSSDFFHIYT-SANNIIYAWRRGID-IVGTYKGHTSPVHL--I 117
KLL + HED++ C SSD +I T S + + W G +V TY+ H+ V+
Sbjct: 649 KLLDIKA-HEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHF 707
Query: 118 LPFGPHLISV--DEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVL---EPSP 172
HL+ +S +K+WD+ +E + F + T + R++ +L
Sbjct: 708 TNKSNHLLLATGSNDSFLKLWDLNQKECRNTM-FGH-TNSVTHCRFSPDDELLASCSADG 765
Query: 173 VVDIIGVGLSNKKIILHN---ILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHL 229
+ + V +N+K ++ L+ E E ++ V S+ DG ++V+ N +
Sbjct: 766 TLKLWDVRSANEKKSINVKRFFLSSEDPPEDVEVI--VKCCSWSADGDRIIVAAKNK--V 821
Query: 230 TVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI 289
+ ++ + +I H + F + L V + ++LW D ++
Sbjct: 822 LLLDIHTSGLLTEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELW---NIDSRVKVADC 878
Query: 290 REGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
R GH + + + F + S + L+A+ D T+R++ T+ N
Sbjct: 879 R-GHLSWVHGVMFSPDGS-SFLTASDDQTIRVWETRKVCKN 917
Score = 102 (41.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 60/263 (22%), Positives = 109/263 (41%)
Query: 44 ETLFVTC-VGKAFHVYGCNHFKLLSVSPQHEDDITCL----SSDFFHIYTSANN-IIYAW 97
++ TC V K ++ KL+ +H + + C S+ + T +N+ + W
Sbjct: 669 DSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLW 728
Query: 98 RRGI-DIVGTYKGHTSPV-HL-ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTF 154
+ T GHT+ V H P L S + +K+WD+++ + S + F
Sbjct: 729 DLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANE--KKSINVKRF 786
Query: 155 KIMGKRWNSCVNVLEP----SPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTAL 210
+ + V V+ S D I V NK ++L +I T L E I T G + +
Sbjct: 787 FLSSEDPPEDVEVIVKCCSWSADGDRIIVAAKNKVLLL-DIHTSGLLTE-IHT-GHHSTI 843
Query: 211 SFRTDGP--PMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP 268
+ P + V + + +WN++ R V+ + H V G F + +T+S
Sbjct: 844 QYCDFSPYDHLAVIALSQYCVELWNIDSR-VKVADCRGHLSWVHGVMFSPDGSSFLTASD 902
Query: 269 DNTLKLWIFDKADGNGRLLRIRE 291
D T+++W K N ++ +E
Sbjct: 903 DQTIRVWETRKVCKNSAIVLKQE 925
Score = 99 (39.9 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 31/121 (25%), Positives = 56/121 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH VR + + +IS D ++VW++ QT + + + FR ++S +
Sbjct: 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNW-QTEEYVFLQAHQET-VKDFRLLRDSRL 1058
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW--DIP 574
L+ D TV + ++ T I R + H G + S D+ + S D T ++W ++P
Sbjct: 1059 LSWSFDG-TVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELP 1117
Query: 575 S 575
S
Sbjct: 1118 S 1118
Score = 97 (39.2 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 38/126 (30%), Positives = 58/126 (46%)
Query: 212 FRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271
F DG + G++ L V+ E + IK AH V F ++ + T S D
Sbjct: 623 FSQDGQRIASCGADKT-LQVFKAETGEKLLDIK-AHEDEVLCCAFSSDDSYIATCSVDKK 680
Query: 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG--DSTLRIFN-TKSET 328
+K+W D G G+L+ E HS N F N S+++L A G DS L++++ + E
Sbjct: 681 VKIW--DS--GTGKLVHTYEEHSEQVNCCHFT-NKSNHLLLATGSNDSFLKLWDLNQKEC 735
Query: 329 SNKNLG 334
N G
Sbjct: 736 RNTMFG 741
Score = 95 (38.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 34/157 (21%), Positives = 72/157 (45%)
Query: 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN 241
++K + + T E L++ V +F +D + + S + +W+ ++ +
Sbjct: 635 ADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDS-YIATCSVDKKVKIWDSGTGKLVH 693
Query: 242 QIKKAHRKVVTGAHFLY--NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNY 299
++ H + V HF N LL T S D+ LKLW ++ + + GH+ +
Sbjct: 694 TYEE-HSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMF----GHTNSVTH 748
Query: 300 IQFYGNSSDNIL-SAAGDSTLRIFNTKSETSNKNLGI 335
+F + D +L S + D TL++++ +S K++ +
Sbjct: 749 CRF--SPDDELLASCSADGTLKLWDVRSANEKKSINV 783
Score = 92 (37.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+ + L + V + +ID+ + GH+ + FSPD +TAS D TIRVW+
Sbjct: 854 LAVIALSQYCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910
Score = 77 (32.2 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNIIDID 532
++S D TVKVW+ TG+ R G + +++ + D T I +
Sbjct: 1058 LLSWSFDGTVKVWNVI-TGRIE-RDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFE 1115
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ + +L GH + + FS D L T + IR+W++ QL+
Sbjct: 1116 LPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLL 1162
Score = 77 (32.2 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 27/127 (21%), Positives = 59/127 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH+ V GV+ ++ +DQT++VW ++ K +K + + F QE+ M
Sbjct: 880 GHLSWVHGVMFSPDGSSFLTASDDQTIRVWETRKVCKNSAIVLKQEIDVVF----QENEM 935
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDAD-----FSPDSRWLITASMDCTIRVW 571
+ + +D NI + +I +G + L +A SP ++ + I++
Sbjct: 936 MVLAVD----NIRGLQ---LIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEEGAIKII 988
Query: 572 DIPSSQL 578
++P++++
Sbjct: 989 ELPNNRV 995
Score = 72 (30.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 480 DQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTV---NIID---ID 532
D+T K+W F+ PL +K N + + +LA D+ + N+ D +
Sbjct: 1106 DKTAKIWSFELPS--PLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLH 1163
Query: 533 TCTIIRKLSG---HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
C I G H G +TD FSPD + L++A ++ W++ + + F
Sbjct: 1164 LCAPISIEEGTATHGGWVTDVCFSPDRKMLVSAGG--YLKWWNVVTGESSQTF 1214
Score = 66 (28.3 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 13/58 (22%), Positives = 29/58 (50%)
Query: 522 DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
++ + II++ + GH + F+ D + LI++S D I+VW+ + + +
Sbjct: 981 EEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYV 1038
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 39/126 (30%), Positives = 63/126 (50%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH G+R + D+ +ISG D+T+KVW+++ TG+ G+ H ++S+
Sbjct: 387 GHESGIRCLQFDDTK--LISGSMDRTIKVWNWR-TGECISTYTGHRGGV--IGLHFDASI 441
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA D TV I + + + L GH + SR + +AS DCT+R+WD+ +
Sbjct: 442 LASGSVDKTVKIWNFEDKSTF-SLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTK 500
Query: 577 QLIDCF 582
I F
Sbjct: 501 TCIRTF 506
Score = 134 (52.2 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 40/115 (34%), Positives = 56/115 (48%)
Query: 433 SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG 492
SG +DR I+ R GH GGV G+ D I+ SG D+TVK+W+F+
Sbjct: 404 SGSMDR-TIKVWNWRTGECISTYTGHRGGVIGLHFDA--SILASGSVDKTVKIWNFEDKS 460
Query: 493 KPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQL 547
LR + ++ R S + DD TV + D+DT T IR GH+GQ+
Sbjct: 461 TFSLRGHT--DWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQV 513
Score = 107 (42.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 33/109 (30%), Positives = 56/109 (51%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
++SGS + VWN + + HR V G HF + +L + S D T+K+W F+
Sbjct: 402 LISGSMDRTIKVWNWRTGECISTYT-GHRGGVIGLHF--DASILASGSVDKTVKIWNFE- 457
Query: 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328
D + LR GH+ N ++ SS + SA+ D T+R+++ ++T
Sbjct: 458 -DKSTFSLR---GHTDWVNAVRV-DTSSRTVFSASDDCTVRLWDLDTKT 501
Score = 75 (31.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 258 YNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS 317
+ + +L T S D T+K+W + G LR GH + +QF ++S + D
Sbjct: 357 FEDNILATGSYDTTIKIWDTE----TGEELRTLRGHESGIRCLQF---DDTKLISGSMDR 409
Query: 318 TLRIFNTKS 326
T++++N ++
Sbjct: 410 TIKVWNWRT 418
Score = 68 (29.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK 493
GH+ GV + +D L ++SG D+ +K+W +TGK
Sbjct: 607 GHLEGVWALGADTLR--IVSGAEDRMIKIWD-PRTGK 640
Score = 67 (28.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/102 (24%), Positives = 46/102 (45%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
+++ D T+++W TG+ LR+ + + ++ + +D + I D T
Sbjct: 582 MVTSALDSTIRLWE-TTTGRC-LRTF-FGHLEGVWALGADTLRIVSGAEDRMIKIWDPRT 638
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
R +GH G +T DSR+ T S DC +R++ S
Sbjct: 639 GKCERTFTGHSGPVTCIGLG-DSRFA-TGSEDCEVRMYSFQS 678
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 137 (53.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 55/222 (24%), Positives = 99/222 (44%)
Query: 106 TYKGHTSPVHLIL---PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN 162
T +GH + V+ I P+G + + + K+W ++ + Y +F T +I+
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYH--TFRGHTAEIV----- 181
Query: 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS 222
C++ +P ++ G + L +I + E + + +LSF T G +++
Sbjct: 182 -CLSF---NPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGN-RIIT 236
Query: 223 GSNTGHLTVWNLED-RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
GS +TVW + R+V I H ++ A F ++ L++T S D T KLW D
Sbjct: 237 GSFDHTVTVWEADTGRKVYTLI--GHCAEISSAVFNWDCSLILTGSMDKTCKLW--DAV- 291
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
NG+ + GH + + I +A+ D T RIF+
Sbjct: 292 -NGKCVATLTGHD-DEILDSCFDYTGKLIATASADGTARIFS 331
Score = 130 (50.8 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH + V + ++++G D+T K+W GK D+ I +
Sbjct: 259 GHCAEISSAVFNWDCSLILTGSMDKTCKLWD-AVNGKCVATLTGHDDEILDSCFDYTGKL 317
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+A D T I T + KL GH G+++ F+P L+T S D T R+WD +
Sbjct: 318 IATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTG 377
Query: 577 QLIDCFQ 583
Q + +
Sbjct: 378 QCLQVLE 384
Score = 108 (43.1 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 29/123 (23%), Positives = 55/123 (44%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH + + + + +V +G D T K+W Q+G+ I + +
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI-QSGEEVFTLTGHSAEIISLSFNTSGNR 233
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ D TV + + DT + L GH +++ A F+ D ++T SMD T ++WD +
Sbjct: 234 IITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNG 293
Query: 577 QLI 579
+ +
Sbjct: 294 KCV 296
Score = 73 (30.8 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 23/85 (27%), Positives = 37/85 (43%)
Query: 242 QIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQ 301
++ +AH +T + +T S D T KLW D A G L EGH I
Sbjct: 86 KVLRAHILPLTNVALNKSGSCFITGSYDRTCKLW--DTASGEE--LHTLEGHRNVVYAIA 141
Query: 302 FYGNSSDNILSAAGDSTLRIFNTKS 326
F D I + + D T ++++ ++
Sbjct: 142 FNNPYGDKIATGSFDKTCKLWSVET 166
>WB|WBGene00004265 [details] [associations]
symbol:qui-1 species:6239 "Caenorhabditis elegans"
[GO:0050913 "sensory perception of bitter taste" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 HSSP:P16649
GO:GO:0050913 GeneTree:ENSGT00700000104282 EMBL:AL021487 PIR:T26919
RefSeq:NP_502613.2 ProteinModelPortal:O62471 SMR:O62471
STRING:O62471 PaxDb:O62471 EnsemblMetazoa:Y45F10B.10 GeneID:178326
KEGG:cel:CELE_Y45F10B.10 UCSC:Y45F10B.10 CTD:178326
WormBase:Y45F10B.10a HOGENOM:HOG000016418 InParanoid:O62471
OMA:MARDSEQ NextBio:900668 Uniprot:O62471
Length = 1592
Score = 134 (52.2 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 43/175 (24%), Positives = 80/175 (45%)
Query: 411 KQSKPTCVYITHCGN--FVLI-GYSS--GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGV 465
K KP +T N ++LI G S G + ++I S G++ GH V +
Sbjct: 863 KDWKPGNTVLTLSANHQYILISGNQSDPGVIYAYHIASEQLIGTF-----KGHTAAVTCL 917
Query: 466 VSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDF 524
S N + + +S D+TV VW F Q+ P S+ ++ + L D
Sbjct: 918 CSSNDSSLFVSTSFDKTVNVWVFSQS--TPTMSLTHHTAKVTCAILTSDDQYLITASADS 975
Query: 525 TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ +I ++T ++R + H G + + ++++LIT S D +++WD+ + + I
Sbjct: 976 SAKMIKLETGEVMRSFNDHTGSVVSLQLTSNNQFLITGSGDFVVQMWDVTNGKCI 1030
Score = 110 (43.8 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 58/246 (23%), Positives = 103/246 (41%)
Query: 60 CNHFKLLSVSPQHEDDITCLSSDFFHIYTSANN----IIYAWRRGID-IVGTYKGHTSPV 114
C F L P + + LS++ +I S N +IYA+ + ++GT+KGHT+ V
Sbjct: 857 CRSFTLKDWKPGNT--VLTLSANHQYILISGNQSDPGVIYAYHIASEQLIGTFKGHTAAV 914
Query: 115 HLILPFGPH--LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSP 172
+ +S + V VW + ++ T +S + T K+ +C +L
Sbjct: 915 TCLCSSNDSSLFVSTSFDKTVNVW-VFSQSTPT-MSLTHHTAKV------TCA-ILTSDD 965
Query: 173 VVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVW 232
I S+ K+I + T E + F G V +L T +++GS + +W
Sbjct: 966 QYLITASADSSAKMI--KLETGEVMRSFNDHTGSVVSLQL-TSNNQFLITGSGDFVVQMW 1022
Query: 233 NLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREG 292
++ + + +++ V T A N+ +V + D TLK +F G+ L G
Sbjct: 1023 DVTNGKCISRMGGLMAPVSTLA-ITSNDAFVVVACEDETLK--VFSTV--GGQELHELMG 1077
Query: 293 HSAPPN 298
H N
Sbjct: 1078 HEGKVN 1083
Score = 108 (43.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 35/137 (25%), Positives = 67/137 (48%)
Query: 450 YGHDNQPGHVG-GVRG-VVSDNLNQIVIS--GGNDQTVKVWHFKQTGKPPLRSIKLDNG- 504
+G D+ P V GV+ + +I++ +++ +K+W F + G PP+ KL +
Sbjct: 1278 FGDDDTPEMVATGVKPPIFVPPTGRIMVGHCSLSNKEMKIWAFPEEG-PPVTRAKLSHSD 1336
Query: 505 -ISFFRTHQES-SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITA 562
I+ F T + + +A D ++ I ID + + L GH +T S D R +++
Sbjct: 1337 EITCFATSPKGGNFIATGSRDMSLKIWQIDKGFLTQVLVGHENVVTCCCISFDERLVVSG 1396
Query: 563 SMDCTIRVWDIPSSQLI 579
+ D I VW++ S ++
Sbjct: 1397 ARDEKIIVWNVQSGDMV 1413
Score = 72 (30.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 29/131 (22%), Positives = 59/131 (45%)
Query: 201 IQTWGPV-TALSFRTDGPPMMVSG--SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL 257
++ W P T L+ + +++SG S+ G + +++ Q+ K H VT
Sbjct: 862 LKDWKPGNTVLTLSANHQYILISGNQSDPGVIYAYHIASEQLIGTFK-GHTAAVTCLCSS 920
Query: 258 YNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS 317
+ L V++S D T+ +W+F ++ L H+A + +++A+ DS
Sbjct: 921 NDSSLFVSTSFDKTVNVWVFSQSTPTMSLTH----HTAKVT-CAILTSDDQYLITASADS 975
Query: 318 TLRIFNTKSET 328
+ ++ K ET
Sbjct: 976 SAKMI--KLET 984
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 110 (43.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 64/281 (22%), Positives = 121/281 (43%)
Query: 64 KLLSVSPQHEDDITC--LSSDFFHIYT-SANNIIYAWRRGID-IVGTYKGHTSPVHL--I 117
KLL + HED++ C SSD +I T SA+ + W +V TY H+ V+
Sbjct: 649 KLLDIKA-HEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHF 707
Query: 118 LPFGPHLISVDEESN--VKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVL---EPSP 172
HL+ ++ +K+WD+ +E + F + T + R++ +L
Sbjct: 708 TNKSNHLLLATGSNDFFLKLWDLNQKECRNTM-FGH-TNSVNHCRFSPDDELLASCSADG 765
Query: 173 VVDIIGVGLSN--KKI-ILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHL 229
+ + V +N K I + L+ E E ++ V S+ DG ++V+ N +
Sbjct: 766 TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVI--VKCCSWSADGDKIIVAAKNK--V 821
Query: 230 TVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI 289
++++ + +I H + F + L V + ++LW D ++
Sbjct: 822 LLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELW---NIDSRLKVADC 878
Query: 290 REGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
R GH + + + F + S + L+A+ D T+R++ TK N
Sbjct: 879 R-GHLSWVHGVMFSPDGS-SFLTASDDQTIRVWETKKVCKN 917
Score = 105 (42.0 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 31/115 (26%), Positives = 52/115 (45%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH VR + + +IS D ++VW++ QTG + + FR Q+S +
Sbjct: 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNW-QTGDYVFLQAHQET-VKDFRLLQDSRL 1058
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
L+ D TV + ++ T I R + H G + S D+ + S D T ++W
Sbjct: 1059 LSWSFDG-TVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIW 1112
Score = 100 (40.3 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 35/157 (22%), Positives = 71/157 (45%)
Query: 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN 241
++K + + T E L++ V +F +D + ++ + +W+ ++ +
Sbjct: 635 ADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADK-KVKIWDSATGKLVH 693
Query: 242 QIKKAHRKVVTGAHFLY--NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNY 299
+ H + V HF N LL T S D LKLW ++ + + GH+ N+
Sbjct: 694 TYDE-HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF----GHTNSVNH 748
Query: 300 IQFYGNSSDNIL-SAAGDSTLRIFNTKSETSNKNLGI 335
+F + D +L S + D TLR+++ +S K++ +
Sbjct: 749 CRF--SPDDELLASCSADGTLRLWDVRSANERKSINV 783
Score = 92 (37.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 57/263 (21%), Positives = 107/263 (40%)
Query: 44 ETLFVTC-VGKAFHVYGCNHFKLLSVSPQHEDDITCL----SSDFFHIYTSANNI-IYAW 97
++ TC K ++ KL+ +H + + C S+ + T +N+ + W
Sbjct: 669 DSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 728
Query: 98 RRGI-DIVGTYKGHTSPV-HL-ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTF 154
+ T GHT+ V H P L S + +++WD+++ S + F
Sbjct: 729 DLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANE--RKSINVKRF 786
Query: 155 KIMGKRWNSCVNVLEP----SPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTAL 210
+ + V V+ S D I V NK ++L +I T L E I T G + +
Sbjct: 787 FLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNK-VLLFDIHTSGLLAE-IHT-GHHSTI 843
Query: 211 SFRTDGP--PMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP 268
+ P + V + + +WN++ R ++ + H V G F + +T+S
Sbjct: 844 QYCDFSPYDHLAVIALSQYCVELWNIDSR-LKVADCRGHLSWVHGVMFSPDGSSFLTASD 902
Query: 269 DNTLKLWIFDKADGNGRLLRIRE 291
D T+++W K N ++ +E
Sbjct: 903 DQTIRVWETKKVCKNSAIVLKQE 925
Score = 91 (37.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+ + L + V + +ID+ + GH+ + FSPD +TAS D TIRVW+
Sbjct: 854 LAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910
Score = 89 (36.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 29/107 (27%), Positives = 48/107 (44%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNIIDID 532
++S D TVKVW+ TG+ R G + +++ + D T I D
Sbjct: 1058 LLSWSFDGTVKVWNVI-TGRIE-RDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFD 1115
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ + +L GH G + + FS D L T + IR+W++ QL+
Sbjct: 1116 LLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLL 1162
Score = 87 (35.7 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 36/126 (28%), Positives = 57/126 (45%)
Query: 212 FRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271
F DG + G++ L V+ E + IK AH V F ++ + T S D
Sbjct: 623 FSQDGQRIASCGADKT-LQVFKAETGEKLLDIK-AHEDEVLCCAFSSDDSYIATCSADKK 680
Query: 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG--DSTLRIFN-TKSET 328
+K+W D A G+L+ + HS N F N S+++L A G D L++++ + E
Sbjct: 681 VKIW--DSA--TGKLVHTYDEHSEQVNCCHFT-NKSNHLLLATGSNDFFLKLWDLNQKEC 735
Query: 329 SNKNLG 334
N G
Sbjct: 736 RNTMFG 741
Score = 82 (33.9 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 480 DQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTV---NIID---ID 532
D+T K+W F PL +K NG + + +LA D+ + N+ D +
Sbjct: 1106 DKTAKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLH 1163
Query: 533 TCTIIRKLSG---HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
+C I G H G +TD FSPDS+ L++A ++ W++ + F
Sbjct: 1164 SCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGG--YLKWWNVATGDSSQTF 1214
Score = 78 (32.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 28/127 (22%), Positives = 58/127 (45%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH+ V GV+ ++ +DQT++VW K+ K +K + + F QE+
Sbjct: 880 GHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVF----QENET 935
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDAD-----FSPDSRWLITASMDCTIRVW 571
+ + +D NI + +I +G + L +A SP ++ D I++
Sbjct: 936 MVLAVD----NIRGLQ---LIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKII 988
Query: 572 DIPSSQL 578
++P++++
Sbjct: 989 ELPNNRV 995
Score = 69 (29.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 522 DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+D + II++ + GH + F+ D + LI++S D I+VW+
Sbjct: 981 EDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWN 1031
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 113 (44.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 31/114 (27%), Positives = 54/114 (47%)
Query: 466 VSDNLNQIVISGGNDQTVKVWHFKQTG-KPPLRSIKLDNGISFFRTHQESSMLAVCLDDF 524
V + + ++S +D T+ ++ G KP R I ++ + SM+A D
Sbjct: 376 VGGKIVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDN 435
Query: 525 TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ + I L GH+ + FS DSR L+TAS D T++VW++ + +L
Sbjct: 436 ATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKL 489
Score = 102 (41.0 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 40/143 (27%), Positives = 60/143 (41%)
Query: 445 AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH---FKQTGKPPLRSIKL 501
A G+ H + GH G V GV + + D+TV++W KQ G K
Sbjct: 182 AETGTPKHTLK-GHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKW 240
Query: 502 DNGISFFRTH---QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558
GI++ H + L DFT I ++T LSGH G ++ + +
Sbjct: 241 VQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGT 300
Query: 559 --LITASMDCTIRVWDIPSSQLI 579
+ TAS D T++VWD L+
Sbjct: 301 GVVYTASHDKTVKVWDAVKGTLL 323
Score = 93 (37.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 33/132 (25%), Positives = 66/132 (50%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLED-RQVENQIKKAHRKVVTGAHF----LYN 259
G V +S+ DG + + S + +W+ E +QV +++K H K V G + L+
Sbjct: 196 GWVLGVSWSPDGT-RLATCSMDKTVRIWDPETGKQVGSELK-GHAKWVQGIAWEPLHLWR 253
Query: 260 E--PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQF-YGNSSDNILSAAGD 316
+ P LV++S D T ++W + GR + GH + +++ GN + + +A+ D
Sbjct: 254 DGTPRLVSASKDFTARIWTVN----TGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHD 309
Query: 317 STLRIFNTKSET 328
T+++++ T
Sbjct: 310 KTVKVWDAVKGT 321
Score = 89 (36.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 30/118 (25%), Positives = 51/118 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK--PPLRS-IKLDNGISFFRTHQE 513
GH V V ++ S G D K+W+ + GK LR + SF +
Sbjct: 411 GHQKQVNHVTFSPDGSMIASAGWDNATKLWNARD-GKFINTLRGHVAPVYQCSF---SAD 466
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
S +L D T+ + ++ T + L GH ++ D+SPD + + + D +R+W
Sbjct: 467 SRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLW 524
Score = 82 (33.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 522 DDFTVNIIDI--DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
DDFT+ + D D I ++ GH Q+ FSPD + +A D ++W+ + I
Sbjct: 389 DDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFI 448
Query: 580 D 580
+
Sbjct: 449 N 449
Score = 73 (30.8 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 26/125 (20%), Positives = 52/125 (41%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
P+ F + +GS +W+ E ++ +K H V G + + L T
Sbjct: 154 PILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLK-GHAGWVLGVSWSPDGTRLAT 212
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIR----EGHSAPPNYIQFYGNSSDNILSAAGDSTLRI 321
S D T+++W + G L+ +G + P + + + + ++SA+ D T RI
Sbjct: 213 CSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEP--LHLWRDGTPRLVSASKDFTARI 270
Query: 322 FNTKS 326
+ +
Sbjct: 271 WTVNT 275
Score = 68 (29.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 41/199 (20%), Positives = 77/199 (38%)
Query: 109 GHTSPVHLILPFGP----HLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSC 164
GH P+ L F P L + ++ ++WD AE + + ++G W+
Sbjct: 150 GHGEPI-LCAQFSPASSARLATGSGDNTARIWD--AETGTPKHTLKGHAGWVLGVSWSPD 206
Query: 165 VNVLEPSPVVDIIGV-GLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG 223
L + + + K + + ++ I W P L DG P +VS
Sbjct: 207 GTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGI-AWEP---LHLWRDGTPRLVSA 262
Query: 224 SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEP--LLVTSSPDNTLKLWIFDKAD 281
S +W + + E+ + H+ V+ + ++ T+S D T+K+W D
Sbjct: 263 SKDFTARIWTVNTGRTEH-VLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVW--DAVK 319
Query: 282 GNGRLLRIREGHSAPPNYI 300
G LL + H+ N++
Sbjct: 320 GT--LLHDLKSHAHWVNHL 336
Score = 63 (27.2 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
K RL GH P QF SS + + +GD+T RI++ ++ T L
Sbjct: 137 KVQAVSRLAHRIPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTL 191
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 112 (44.5 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 31/109 (28%), Positives = 51/109 (46%)
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIKLD------NGISFFRTHQESSMLAVCLDDFTVNII 529
S D+T+K+W+ G P + LD N + +F T + L DD T +
Sbjct: 375 SASLDRTIKIWNL---GSPD-PNFTLDAHLKGVNCVDYF-TGGDKPYLITGSDDHTAKVW 429
Query: 530 DIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
D T + ++ L GH ++ F P+ +IT S D T+R+W + +L
Sbjct: 430 DYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRL 478
Score = 102 (41.0 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 50/205 (24%), Positives = 87/205 (42%)
Query: 135 VW---DIKAEETYLELSFDNDTFKIMGK--RWNSCVNVLEPSPVVDIIGVGLSNKKIILH 189
VW D+ + L FD +I K + + V ++ P I L + + +
Sbjct: 198 VWTCKDVYVRVFLIALKFDPLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIW 257
Query: 190 NILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRK 249
N T + F T PV + F +V+G++ + V+N + ++ +AH
Sbjct: 258 NYQTQTMVKSFDVTELPVRSAKFIAR-KQWVVAGADDMFIRVYNYNTMD-KIKVFEAHAD 315
Query: 250 VVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLL-RIREGHSAPPNYIQFYGNSSD 308
+ P +++SS D +KLW ++K G L +I EGHS + F ++
Sbjct: 316 YIRCVAVHPTLPYVLSSSDDMLIKLWDWEK----GWLCTQIFEGHSHYVMQVTFNPKDTN 371
Query: 309 NILSAAGDSTLRIFNTKSETSNKNL 333
SA+ D T++I+N S N L
Sbjct: 372 TFASASLDRTIKIWNLGSPDPNFTL 396
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 163 (62.4 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 41/123 (33%), Positives = 62/123 (50%)
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI--KLDNGISFFRT 510
D GH G VRG+ + +SGG+D V VW++K + L S+ +D +
Sbjct: 47 DRFDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKS--RKLLFSLCGHMDY-VRVCTF 103
Query: 511 HQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRV 570
H E + C DD T+ I + + I L+GH + A F P +++AS+D T+RV
Sbjct: 104 HHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRV 163
Query: 571 WDI 573
WDI
Sbjct: 164 WDI 166
Score = 117 (46.2 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 41/152 (26%), Positives = 69/152 (45%)
Query: 172 PVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTV 231
P I L N +I L + L F GPV ++F P+ VSG + + V
Sbjct: 21 PTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPT-QPLFVSGGDDYKVNV 79
Query: 232 WNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE 291
WN + R++ + H V F + P +++ S D T+++W + + + I
Sbjct: 80 WNYKSRKLLFSLC-GHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRN----CIAILT 134
Query: 292 GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
GHS F+ S D I+SA+ D T+R+++
Sbjct: 135 GHSHYVMCAAFHP-SEDLIVSASLDQTVRVWD 165
Score = 78 (32.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNI--IDIDTCTIIRKLSGHMGQLTDADFSPDSRWL 559
D G+++ H ++ DD V + + + GH ++ F P +
Sbjct: 212 DRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQELI 271
Query: 560 ITASMDCTIRVWDIPSSQLIDCFQ 583
++AS D TIRVWD+ + F+
Sbjct: 272 LSASEDKTIRVWDLNRRTAVQTFR 295
Score = 68 (29.0 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 20/85 (23%), Positives = 40/85 (47%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGIS--FFRTHQE 513
GH GV +++S G+D+ VK+W + + + + N +S F HQE
Sbjct: 210 GHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQE 269
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIR 538
++ +D T+ + D++ T ++
Sbjct: 270 --LILSASEDKTIRVWDLNRRTAVQ 292
Score = 65 (27.9 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRT-H 511
D GH V + ++++S D+T++VW + + +++ + DN +F T H
Sbjct: 250 DTCRGHFNNVSCCLFHPHQELILSASEDKTIRVWDLNR--RTAVQTFRRDNDRFWFITVH 307
Query: 512 QESSMLAVCLD 522
+ ++ A D
Sbjct: 308 PKLNLFAAAHD 318
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 163 (62.4 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 41/120 (34%), Positives = 62/120 (51%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRT---HQE 513
H G VRGV N + +SGG+D +KVW++K R + L + + RT H E
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNH-----RCLFTLLGHLDYIRTVQFHHE 104
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ DD T+ I + + T + L+GH + A F P +++AS+D T+RVWDI
Sbjct: 105 YPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 117 (46.2 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 36/122 (29%), Positives = 61/122 (50%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
V LSF P ++ S ++G + +W+ + ++ + H V G HF ++PL V+
Sbjct: 12 VKGLSFHPKRPWILAS-LHSGVIQLWDYRMGTLIDRFDE-HEGPVRGVHFHNSQPLFVSG 69
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
D +K+W + N R L GH +QF+ + I+SA+ D T+RI+N +S
Sbjct: 70 GDDYKIKVWNYK----NHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQS 124
Query: 327 ET 328
T
Sbjct: 125 RT 126
Score = 70 (29.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF-KQTGKPPLRSIKLDNGISFFRTH 511
D GH+ V V+ I++S D++++VW K+TG R + + H
Sbjct: 242 DTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFR--REHDRFWILAVH 299
Query: 512 QESSMLA 518
E ++LA
Sbjct: 300 PEMNLLA 306
Score = 68 (29.0 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWL 559
D G+++ H ++ DD V + ++ + L GHM ++ F +
Sbjct: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDII 263
Query: 560 ITASMDCTIRVWD 572
++ S D +IRVWD
Sbjct: 264 VSNSEDKSIRVWD 276
Score = 68 (29.0 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 16/75 (21%), Positives = 35/75 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH GV +++SG +D+ VK+W +T + +++ N +S H +
Sbjct: 202 GHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQD 261
Query: 516 MLAVCLDDFTVNIID 530
++ +D ++ + D
Sbjct: 262 IIVSNSEDKSIRVWD 276
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 36/141 (25%), Positives = 75/141 (53%)
Query: 444 GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN 503
GA+ G + + GH G+ + ++++ S +D+T+K+W ++GK ++++K
Sbjct: 74 GAYDGKFERTLE-GHKEGISDIAWSQDSKLICSASDDKTIKIWDV-ESGKM-VKTLKGHK 130
Query: 504 ----GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWL 559
G+SF + +S+++ D V I D++T + +S H +T F+ D +
Sbjct: 131 EYVFGVSF---NPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLV 187
Query: 560 ITASMDCTIRVWDIPSSQLID 580
++ S D T+R+WD + QL++
Sbjct: 188 VSGSYDGTVRIWDTTTGQLLN 208
Score = 143 (55.4 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 32/122 (26%), Positives = 62/122 (50%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESS 515
GH+ + V + + S D+T+K+W GK R+++ GIS Q+S
Sbjct: 44 GHLKSISSVKFSPDGKWLASASADKTIKIWG-AYDGKFE-RTLEGHKEGISDIAWSQDSK 101
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
++ DD T+ I D+++ +++ L GH + F+P S +++ S D +R+WD+ +
Sbjct: 102 LICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNT 161
Query: 576 SQ 577
+
Sbjct: 162 GE 163
Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 47/205 (22%), Positives = 91/205 (44%)
Query: 124 LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN 183
+ S ++ +K+WD+++ + L + + G +N P ++I G +
Sbjct: 103 ICSASDDKTIKIWDVESGKMVKTLKGHKEY--VFGVSFN---------PQSNLIVSGSFD 151
Query: 184 KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI 243
+ + + ++ T E PVT + F DG ++VSGS G + +W+ Q+ N I
Sbjct: 152 ENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGT-LVVSGSYDGTVRIWDTTTGQLLNTI 210
Query: 244 KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI--Q 301
K V+ F N ++ + DNTL+LW ++ N + L+ GH I
Sbjct: 211 STEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNN---NKKCLKTYTGHKNEKYCIFST 267
Query: 302 FYGNSSDNILSAAGDSTLRIFNTKS 326
F I++ + D+ + I+N ++
Sbjct: 268 FSVTCGKWIVTGSEDNLIYIYNLQT 292
Score = 111 (44.1 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 32/119 (26%), Positives = 62/119 (52%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK-PPLRSIKLD--NGISFFRTHQE 513
GH V GV + + +++SG D+ V++W TG+ + S D G+ F R +
Sbjct: 128 GHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVN-TGECTKMISAHSDPVTGVHFNR---D 183
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMG-QLTDADFSPDSRWLITASMDCTIRVW 571
+++ D TV I D T ++ +S G +++ FSP+ ++++ ++D T+R+W
Sbjct: 184 GTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLW 242
Score = 89 (36.4 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 27/90 (30%), Positives = 44/90 (48%)
Query: 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW-IFDKADGNGRLLRIREGHSAPPNYIQFY 303
K H K ++ F + L ++S D T+K+W +D G+ R EGH + I +
Sbjct: 43 KGHLKSISSVKFSPDGKWLASASADKTIKIWGAYD-----GKFERTLEGHKEGISDIA-W 96
Query: 304 GNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
S I SA+ D T++I++ +S K L
Sbjct: 97 SQDSKLICSASDDKTIKIWDVESGKMVKTL 126
Score = 89 (36.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 32/129 (24%), Positives = 64/129 (49%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG--ISFFRTHQESS 515
H V GV + +V+SG D TV++W TG+ L +I ++G +SF +
Sbjct: 171 HSDPVTGVHFNRDGTLVVSGSYDGTVRIWD-TTTGQL-LNTISTEDGKEVSFVKFSPNGK 228
Query: 516 -MLAVCLDDFTVNIIDIDTCT-IIRKLSGHMGQ--LTDADFSPD-SRWLITASMDCTIRV 570
+LA LD+ T+ + + ++ +GH + + FS +W++T S D I +
Sbjct: 229 FVLAGTLDN-TLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYI 287
Query: 571 WDIPSSQLI 579
+++ + +++
Sbjct: 288 YNLQTREIV 296
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 113 (44.8 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 34/147 (23%), Positives = 65/147 (44%)
Query: 438 RFNIQSGAHRGSYGHD---NQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP 494
RFN+ S ++ + + H V + +I+ S D+T+K+W TG+
Sbjct: 441 RFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWD-SSTGEV 499
Query: 495 P--LRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADF 552
LR + G+ + S LA D T+ I ++DT ++ L GH G + +
Sbjct: 500 VGVLRGHR--RGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIY 557
Query: 553 SPDSRWLITASMDCTIRVWDIPSSQLI 579
+++A+ D ++VW + S + +
Sbjct: 558 ISQGTQVVSAAADGLVKVWSLSSGECV 584
Score = 108 (43.1 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 457 GHVGGVRGVVSDNLN-----QIVISGGNDQTVKVWHF-KQTGKPPLRS-----IKL-DNG 504
GH V V L+ + S D+T+K ++ Q K + IK D
Sbjct: 408 GHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRD 467
Query: 505 ISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
++ + ++ ++A D T+ + D T ++ L GH + F+P SR L + S
Sbjct: 468 VNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSG 527
Query: 565 DCTIRVWDIPSSQLIDCFQ 583
D TIR+W++ + Q + +
Sbjct: 528 DRTIRIWNVDTQQCVQTLE 546
Score = 96 (38.9 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
LAVC + +++I D + L GH + D S D WL T + D T+R+W++
Sbjct: 337 LAVCSNTEFIDVISTDGTQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNL 393
Score = 91 (37.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 26/119 (21%), Positives = 59/119 (49%)
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF--LYNEPLLVTSSPDNTLKLWI 276
++ +G G + VW++ V + + H V++ F N +L + + D+ ++LW
Sbjct: 117 LLATGGAEGLVKVWDIAGAYVTHSFR-GHGGVISALCFGKHQNTWVLASGADDSRVRLWD 175
Query: 277 FDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGI 335
+ + R + + EGHS+ + F S +LS + D T++++N K ++ + + +
Sbjct: 176 LNSS----RSMAVFEGHSSVIRGLTFEPTGSF-LLSGSRDKTVQVWNIKKRSAVRTIPV 229
Score = 80 (33.2 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 30/113 (26%), Positives = 51/113 (45%)
Query: 224 SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN 283
SNT + V + + QV + + H +V + L T + DNT++LW + D
Sbjct: 341 SNTEFIDVISTDGTQVFG-VLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNV 399
Query: 284 GRLLRIREGHSAPPNYIQFYG---NSSDNIL-SAAGDSTLRIFNTKSETSNKN 332
+ + + GH+A + N L S++ D TL+ FN S+ NK+
Sbjct: 400 YKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQL-NKS 451
Score = 79 (32.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 27/117 (23%), Positives = 51/117 (43%)
Query: 205 GPVTALSF-RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLL 263
G ++AL F + ++ SG++ + +W+L + + + H V+ G F L
Sbjct: 146 GVISALCFGKHQNTWVLASGADDSRVRLWDLNSSR-SMAVFEGHSSVIRGLTFEPTGSFL 204
Query: 264 VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPP-NYIQFYGNSSDNILSAAGDSTL 319
++ S D T+++W K + I HS ++ G + IL AG+ L
Sbjct: 205 LSGSRDKTVQVWNIKKRSA---VRTIPVFHSVEAIGWVN--GQPEEKILYTAGEGNL 256
Score = 74 (31.1 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 14/49 (28%), Positives = 29/49 (59%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGI 505
GH +RG+ + ++SG D+TV+VW+ K+ + +R+I + + +
Sbjct: 187 GHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKK--RSAVRTIPVFHSV 233
Score = 67 (28.6 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 30/125 (24%), Positives = 56/125 (44%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLED-RQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
VTAL+ +D + ++ + LT++ + R++++ KAH V LL T
Sbjct: 64 VTALAITSDSKKL-IAAFRSRLLTIYEIPSGRRIKSM--KAHETPVITMTIDPTNTLLAT 120
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL-SAAGDSTLRIFNT 324
+ +K+W D A + GH + + F + + +L S A DS +R+++
Sbjct: 121 GGAEGLVKVW--DIA--GAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDL 176
Query: 325 KSETS 329
S S
Sbjct: 177 NSSRS 181
Score = 59 (25.8 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 104 VGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIK 139
+ ++GH+S + + P G L+S + V+VW+IK
Sbjct: 182 MAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIK 219
Score = 58 (25.5 bits), Expect = 5.9e-08, Sum P(3) = 5.9e-08
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 90 ANNIIYAWR-RGIDIVGTYKGHTSPVHLILPFGPH-----LISVDEESNVKVWDIKAEET 143
A ++ W G + +++GH + + FG H L S ++S V++WD+ + +
Sbjct: 123 AEGLVKVWDIAGAYVTHSFRGHGGVISALC-FGKHQNTWVLASGADDSRVRLWDLNSSRS 181
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 115 (45.5 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 37/142 (26%), Positives = 58/142 (40%)
Query: 457 GHVGGVRGVVSDNLNQ-IVISGGNDQTVKVWHF------KQTGKP----PLRSIKL---- 501
GH V + L + +++G D TVK+W K T PL++
Sbjct: 419 GHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQRCH 478
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLIT 561
D I+ +LA D T + + C ++ SGH L + FSP + L T
Sbjct: 479 DKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVLAT 538
Query: 562 ASMDCTIRVWDIPSSQLIDCFQ 583
AS D TI++W + + F+
Sbjct: 539 ASADGTIKLWALQDFSCLKTFE 560
Score = 94 (38.1 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 65/266 (24%), Positives = 108/266 (40%)
Query: 46 LFVTCVGKAFHVYGCNHFKLL-SVSPQHEDDITC--LSSDFFHIYTSANNII---YAWRR 99
LF C G ++ L+ S+ + ++DIT LS D + T++ ++ +AWR
Sbjct: 39 LFCVC-GTKVNILDVASGDLIRSLEQEDQEDITAFDLSPDDEVLVTASRALLLAQWAWRE 97
Query: 100 GIDIVGTYKG-HTSPV-HLILPFGPHLISVDE-ESNVKVWDIKAEETYLELSFDNDTFKI 156
G + +K HT+PV + L++ + V+VWDI + Y T
Sbjct: 98 GT-VARLWKAIHTAPVASMAFDATSTLLATGGCDGAVRVWDIV--QHY-------GTHHF 147
Query: 157 MGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQT-WGPVTALSFRTD 215
G + P P ++ + I + + L D S + + + VT+LSF D
Sbjct: 148 RGSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWS-LQDRSCLAVLTAHYSAVTSLSFSED 206
Query: 216 GPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
G M+ SG + + VW+L + + V + L EP L ++ L
Sbjct: 207 GHTMLSSGRDKICI-VWDLRSYETSRTVPVFES--VEASVLLPEEPALALGVKNSGLH-- 261
Query: 276 IFDKADGNGRLLRIREGHSAPPNYIQ 301
F A G +LR+ E S Y Q
Sbjct: 262 -FLTAGDQG-ILRVWEAASGQCVYTQ 285
Score = 76 (31.8 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 25/116 (21%), Positives = 51/116 (43%)
Query: 466 VSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN--GISFFRTHQESSMLAVCLDD 523
VS N ++++ +G D+T K+W Q + S + F T Q +LA D
Sbjct: 487 VSPN-DKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQ---VLATASAD 542
Query: 524 FTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
T+ + + + ++ GH + F L+++ D +++W I S++ +
Sbjct: 543 GTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSNECV 598
Score = 61 (26.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 25/123 (20%), Positives = 49/123 (39%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+TA D ++V+ S L W + V K H V F LL T
Sbjct: 69 ITAFDLSPDDE-VLVTASRALLLAQWAWREGTVARLWKAIHTAPVASMAFDATSTLLATG 127
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL-SAAGDSTLRIFNTK 325
D +++W + G G + + F+ + + +L S+A D+++R+++ +
Sbjct: 128 GCDGAVRVWDIVQHYGTHHF----RGSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQ 183
Query: 326 SET 328
+
Sbjct: 184 DRS 186
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 143 (55.4 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 39/124 (31%), Positives = 63/124 (50%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQ 512
GH+ V V + + +G D+TV++W +Q G S++L G +
Sbjct: 420 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQ-GN----SVRLFTGHRGPVLSLAFSP 474
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
LA +D + + D+ + T+ ++L GH +T FSPDS + +ASMD ++RVWD
Sbjct: 475 NGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWD 534
Query: 573 IPSS 576
I SS
Sbjct: 535 IRSS 538
Score = 122 (48.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 31/105 (29%), Positives = 52/105 (49%)
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDN--GISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
S +D+T ++W F +T PLR I + + + H S+ LA D TV +
Sbjct: 397 SASHDRTARLWSFDRTY--PLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQ 453
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+R +GH G + FSP+ ++L +A D +++WD+ S L
Sbjct: 454 GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 498
Score = 61 (26.5 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 278 DKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETS 329
D+ D G +++ GH P +F +SS +LS + D ++R ++ S T+
Sbjct: 322 DEDDNLGTEMKVLRGHCGPVYSTRFLADSS-GLLSCSEDMSIRYWDLGSFTN 372
Score = 51 (23.0 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 108 KGHTSPVHL--ILPFGPHLISVDEESNVKVWDI 138
+GH PV+ L L+S E+ +++ WD+
Sbjct: 335 RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL 367
Score = 49 (22.3 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 20/84 (23%), Positives = 38/84 (45%)
Query: 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNY 299
E ++ + H V FL + L++ S D +++ W D +L +GH+ P
Sbjct: 330 EMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYW--DLGSFTNTVLY--QGHAYPVWD 385
Query: 300 IQFYGNSSDNILSAAGDSTLRIFN 323
+ +S SA+ D T R+++
Sbjct: 386 LDISPHSL-YFASASHDRTARLWS 408
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 155 (59.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 39/121 (32%), Positives = 63/121 (52%)
Query: 454 NQPGHVGGVRGV-VSDNLNQIVISGGNDQTVKVWHFKQTGKP-PLRSIKLDNGISFFRTH 511
N GH VR + + N + I++S D+T+++W + GK + S L +
Sbjct: 148 NLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQ-WVYCCSIS 206
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ SML + +V + + + T+IRKL GH + DFSPDS L+TAS D ++ +W
Sbjct: 207 PDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMW 266
Query: 572 D 572
D
Sbjct: 267 D 267
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 161 (61.7 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 42/123 (34%), Positives = 59/123 (47%)
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD--NGISFFRT 510
D HVG VR V + +SGG+D T+KVW + LD G+SF
Sbjct: 47 DRFEDHVGPVRSVDFHPTQPLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSF--- 103
Query: 511 HQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRV 570
H + + C DD T+ I + I L+GH + A F P +++AS+D T+RV
Sbjct: 104 HHDLPWIISCSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRV 163
Query: 571 WDI 573
WDI
Sbjct: 164 WDI 166
Score = 122 (48.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264
GPV ++ F P+ VSG + + VW+L R+ + H + G F ++ P ++
Sbjct: 54 GPVRSVDFHPT-QPLFVSGGDDYTIKVWSLNTRKCIFTLN-GHLDYIRGVSFHHDLPWII 111
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
+ S D T+++W + N + + GH+ QF+ S D I+SA+ D T+R+++
Sbjct: 112 SCSDDQTIRIWNWQ----NRQEIACLTGHNHYVMSAQFHP-SEDLIVSASLDQTVRVWD 165
Score = 102 (41.0 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+ +SF D P ++S S+ + +WN ++RQ E H V A F +E L+V++
Sbjct: 98 IRGVSFHHD-LPWIISCSDDQTIRIWNWQNRQ-EIACLTGHNHYVMSAQFHPSEDLIVSA 155
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFY 303
S D T+++W D +G +R+ HSAP + ++ +
Sbjct: 156 SLDQTVRVW-----DISG----LRKKHSAPTSSVRAF 183
Score = 85 (35.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDI-DT-CTIIRKLSGHMGQLTDADFSPDSRWL 559
D G+++ H ++ DD V + + DT + GH G + A F P +
Sbjct: 213 DKGVNYASFHPTLPLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHPHQDLI 272
Query: 560 ITASMDCTIRVWDI 573
++ S D TIRVWD+
Sbjct: 273 LSVSDDKTIRVWDL 286
Score = 74 (31.1 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 16/71 (22%), Positives = 33/71 (46%)
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTH 511
D GH G V + +++S +D+T++VW + + P++ + ++ +H
Sbjct: 251 DTCRGHTGNVLSAIFHPHQDLILSVSDDKTIRVWDLNK--RVPVKQFRREHDRFWLIASH 308
Query: 512 QESSMLAVCLD 522
S+ A C D
Sbjct: 309 PTISLFAACHD 319
Score = 71 (30.1 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG---ISFFRTHQE 513
GH GV +++S G+D+ VK+W T + + + G + F HQ+
Sbjct: 211 GHDKGVNYASFHPTLPLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHPHQD 270
Query: 514 SSMLAVCLDDFTVNIIDID 532
+L+V DD T+ + D++
Sbjct: 271 L-ILSVS-DDKTIRVWDLN 287
Score = 58 (25.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 22/99 (22%), Positives = 38/99 (38%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532
+++S DQTV+VW K + + + F + L D NI
Sbjct: 151 LIVSASLDQTVRVWDISGLRK---KHSAPTSSVRAFEDQLQRQQLPQ--QDIFGNI---- 201
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ L GH + A F P +++A D +++W
Sbjct: 202 NAVVKYVLEGHDKGVNYASFHPTLPLIVSAGDDRVVKLW 240
Score = 56 (24.8 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 12/57 (21%), Positives = 27/57 (47%)
Query: 94 IYAWRRGIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELS 148
++ +R G ++ ++ H PV + P P +S ++ +KVW + + L+
Sbjct: 37 LWDYRMGT-LIDRFEDHVGPVRSVDFHPTQPLFVSGGDDYTIKVWSLNTRKCIFTLN 92
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 124 (48.7 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 33/127 (25%), Positives = 58/127 (45%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESSM 516
H VR V + Q +++ +D+T+KVW + + L S+ N + R + +
Sbjct: 103 HTATVRSVHFSSDGQSLVTASDDKTIKVWTVHR--QKFLFSLSQHINWVRCARFSPDGRL 160
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+A DD TV + D + I H G +F P + A D T++VWD+ +
Sbjct: 161 IASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMN 220
Query: 577 QLIDCFQ 583
+L+ +Q
Sbjct: 221 RLLQHYQ 227
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 60/258 (23%), Positives = 103/258 (39%)
Query: 72 HEDDITCLS-SDFFHIYTSANN--IIYAWRRGIDIVGT-YKGHTSPVHLILPFGPHLISV 127
H+D + C+ S H+ S + + W + T +K HT+ V + H S
Sbjct: 61 HKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSV-----HFSS- 114
Query: 128 DEESNVKVWDIKAEETYLELSFDNDTFKIMGK-RWNSCVNVLEPSPVVDIIGVGLSNKKI 186
D +S V D K + + + F + W C SP +I +K +
Sbjct: 115 DGQSLVTASDDKTIKVWT-VHRQKFLFSLSQHINWVRCARF---SPDGRLIASASDDKTV 170
Query: 187 ILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKA 246
L + + E + F + G + F G + +G++ + VW++ ++ Q +
Sbjct: 171 KLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKT-VKVWDVRMNRLL-QHYQV 228
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
H V F + L+T+S D+TLK I D +G RLL GH P + F +
Sbjct: 229 HTAAVNSLSFHPSGNYLITASNDSTLK--ILDLLEG--RLLYTLHGHQGPATCVAF-SRT 283
Query: 307 SDNILSAAGDSTLRIFNT 324
D S D + ++ T
Sbjct: 284 GDFFASGGSDEQVMVWKT 301
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 34/126 (26%), Positives = 53/126 (42%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH V V +V SG D+TV +W G+ + + +
Sbjct: 60 GHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTAT-VRSVHFSSDGQS 118
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
L DD T+ + + + LS H+ + A FSPD R + +AS D T+++WD S
Sbjct: 119 LVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSR 178
Query: 577 QLIDCF 582
+ I F
Sbjct: 179 ECIHSF 184
Score = 120 (47.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 30/123 (24%), Positives = 56/123 (45%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS-FFRTHQESSM 516
H+ VR +++ S +D+TVK+W +T + + S G + H +
Sbjct: 145 HINWVRCARFSPDGRLIASASDDKTVKLWD--KTSRECIHSFCEHGGFANHVEFHPSGTC 202
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+A D TV + D+ +++ H + F P +LITAS D T+++ D+
Sbjct: 203 IAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEG 262
Query: 577 QLI 579
+L+
Sbjct: 263 RLL 265
Score = 94 (38.1 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 26/100 (26%), Positives = 42/100 (42%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLD--NGISFFRTHQESSMLAVCLDDFTVNIIDI 531
+ + G D+TVKVW + + N +SF H + L +D T+ I+D+
Sbjct: 203 IAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSF---HPSGNYLITASNDSTLKILDL 259
Query: 532 DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
++ L GH G T FS + + D + VW
Sbjct: 260 LEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 94 (38.1 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
V + F G ++ SGS + +W + + E+ + KAH V HF + LVT+
Sbjct: 65 VMCVQFSPSGH-LVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSLVTA 122
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDSTLRIFNT 324
S D T+K+W + + L H N+++ S D I SA+ D T+++++
Sbjct: 123 SDDKTIKVWTVHRQ----KFLFSLSQHI---NWVRCARFSPDGRLIASASDDKTVKLWDK 175
Query: 325 KS 326
S
Sbjct: 176 TS 177
Score = 72 (30.4 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 26/97 (26%), Positives = 42/97 (43%)
Query: 235 EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS 294
ED +E + HR +T F N+ L + S D+ LK+W K L GH
Sbjct: 8 EDPSLERHFR-GHRDAITSVDFSLNKKQLASGSMDSCLKIWSM-KPQMRAYCL---VGHK 62
Query: 295 APPNYIQFYGNSSDNILSAAGDSTLRIF--NTKSETS 329
+QF S + S + D T+ ++ + K E++
Sbjct: 63 DAVMCVQF-SPSGHLVASGSRDKTVCLWVPSVKGEST 98
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 111 (44.1 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 40/161 (24%), Positives = 65/161 (40%)
Query: 433 SGHVDRFNIQSG-AHRGSYGHDNQPGHVGGVRGVVSDNLNQ-IVISGGNDQTVKVWHFKQ 490
S V R ++ SG H + G GH V + + Q V+SG D TVKVW +
Sbjct: 409 SVRVWRMDVSSGRVHCVAQG----TGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPE 464
Query: 491 T-GKPPLRSIKL-------DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSG 542
T G + +K + ++ +LA D T + + ++ G
Sbjct: 465 TTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRG 524
Query: 543 HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
H + FSP + L +AS D ++R+W I + F+
Sbjct: 525 HRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFE 565
Score = 98 (39.6 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 32/121 (26%), Positives = 53/121 (43%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+TA + D M+VS S L W+ + +Q + H V F LL T
Sbjct: 66 ITAFALSPDDE-MLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLATG 124
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSD-NILSAAGDSTLRIFNTK 325
D T+KLW K L +G S + ++F+ + S + S++ D +RI++ +
Sbjct: 125 GCDGTIKLWDVIKQYCTHNL----KGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLR 180
Query: 326 S 326
S
Sbjct: 181 S 181
Score = 98 (39.6 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 37/113 (32%), Positives = 53/113 (46%)
Query: 220 MVSGSNTGHLTVWNL-EDRQVENQI-------KKAHRKVVTGAHFLYNEPLLVTSSPDNT 271
+VSGS + VW+L E E + ++AH K V N+ LL + S D T
Sbjct: 448 VVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRT 507
Query: 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL-SAAGDSTLRIFN 323
KLW RLL + GH +QF + D IL SA+ D ++RI++
Sbjct: 508 AKLWALSDL----RLLGVCRGHRRGVWSVQF--SPVDQILGSASADGSVRIWS 554
Score = 86 (35.3 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 18/70 (25%), Positives = 39/70 (55%)
Query: 512 QESSMLAVCLDDFTVNI--IDIDTCTI--IRKLSGHMGQLTDADFSP-DSRWLITASMDC 566
++ SM A C D +V + +D+ + + + + +GH + S +++++ S DC
Sbjct: 396 RKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDC 455
Query: 567 TIRVWDIPSS 576
T++VWD+P +
Sbjct: 456 TVKVWDLPET 465
Score = 74 (31.1 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 42/212 (19%), Positives = 101/212 (47%)
Query: 43 KETLFVTCVGKAFHVYGCNHFKLL-SVSPQHEDDITC--LSSDFFHIYTSANNII---YA 96
++ +F T G ++ + K++ S+ + ++DIT LS D + +++ ++ +
Sbjct: 33 EQHIFCT-YGPKINILQISTGKIIHSIEQEDQEDITAFALSPDDEMLVSASRALLLRQWD 91
Query: 97 WRRGIDIVGTYKG-HTSPV-HLILPFGPHLISVDE-ESNVKVWDIKAEETYLELSFDNDT 153
W++ +++ H+ PV + L++ + +K+WD+ + Y T
Sbjct: 92 WKQQ-QCRRSWRAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQ--YC-------T 141
Query: 154 FKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKK--IILHNILTDESLMEFIQTWGPVTALS 211
+ G + V+++E P + + + S+ I + ++ + + + PVTAL+
Sbjct: 142 HNLKGS--SGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALA 199
Query: 212 FRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI 243
F DG ++ SG + +VW+L++++V+ I
Sbjct: 200 FSPDGHTLVSSGRDK-ICSVWDLQEQKVKRTI 230
Score = 73 (30.8 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 28/116 (24%), Positives = 46/116 (39%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESS 515
GH GV V ++QI+ S D +V++W + L++ + D + +
Sbjct: 524 GHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSC--LKTFEGHDASVLKIIFVSRGT 581
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
L D V + I T +R L H ++ ++T S D TI VW
Sbjct: 582 QLVSSGSDGLVKLWTIKTNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVW 637
Score = 48 (22.0 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTH 511
++++++G D T+ VW K ++S K +D + F TH
Sbjct: 622 DELMVTGSADSTITVWTDKLRKTVIIKSTKKVDQSLFKF-TH 662
>ASPGD|ASPL0000034848 [details] [associations]
symbol:AN2861 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 SUPFAM:SSF81383 EMBL:AACD01000051 KO:K03362
RefSeq:XP_660465.1 ProteinModelPortal:Q5B9B9
EnsemblFungi:CADANIAT00010229 GeneID:2874563 KEGG:ani:AN2861.2
HOGENOM:HOG000198049 OMA:YHSASIL OrthoDB:EOG4X6GHM Uniprot:Q5B9B9
Length = 656
Score = 112 (44.5 bits), Expect = 8.2e-08, Sum P(3) = 8.2e-08
Identities = 40/146 (27%), Positives = 72/146 (49%)
Query: 196 SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAH 255
SL E + + L + D +MV+GS+ +W++++ + + H V
Sbjct: 401 SLHEKPSNYHSASILCLQFDDE-IMVTGSSDHTCIIWDIKNDYKPIRRLEGHTAGVLDVC 459
Query: 256 FLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG 315
F + +V+ S DNT+ +W D+ +G L++ GH P N +Q G D I+SA+G
Sbjct: 460 F--DHRYIVSCSKDNTICVW--DRR--SGALVKKLYGHRGPVNAVQLRG---DLIVSASG 510
Query: 316 DSTLRIFNTKS-----ETSNKNLGIA 336
D +++N S E S+++ G+A
Sbjct: 511 DGVAKLWNITSGLCVKEFSSRDRGLA 536
Score = 82 (33.9 bits), Expect = 8.2e-08, Sum P(3) = 8.2e-08
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 417 CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476
CV ++ VL G G+ DR Q A+ G + + GH G VR + D++NQ ++S
Sbjct: 537 CVEFSNDARTVLTG---GN-DRAIYQFDANTGQLVKEIE-GHTGLVRSLHLDDVNQRIVS 591
Query: 477 GGNDQTVKVWHFKQTGK 493
G D +VKV+ Q G+
Sbjct: 592 GSYDTSVKVFD-AQAGE 607
Score = 53 (23.7 bits), Expect = 8.2e-08, Sum P(3) = 8.2e-08
Identities = 12/58 (20%), Positives = 24/58 (41%)
Query: 82 DFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIK 139
D+ +Y + W+ G +GHT V+ +I+ + ++VWD +
Sbjct: 294 DWKRLYLIRRTLESRWKEGKAAAIYLQGHTDSVYCAQFDEDKIITGSRDRTIRVWDAR 351
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 106 (42.4 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 29/108 (26%), Positives = 54/108 (50%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG +D T+ +W + KP R I+ ++ ++A D ++ + + T
Sbjct: 357 LVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRT 416
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL-ID 580
+ L GH+ + +S DSR L++ S D T++VWD + +L ID
Sbjct: 417 GKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAID 464
Score = 106 (42.4 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 29/120 (24%), Positives = 57/120 (47%)
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTH 511
+ GH + V+ +I+ S D+++K+W + TGK L S++ + +
Sbjct: 379 ERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGR-TGKY-LTSLRGHVSAVYQIAWS 436
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+S +L D T+ + D +T + L GH ++ D+SPD + + + D +R+W
Sbjct: 437 ADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
Score = 96 (38.9 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 53/214 (24%), Positives = 89/214 (41%)
Query: 108 KGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKR-WNSC 164
+GHT V + P G +L S ++ V+ WD LS + F G R W
Sbjct: 124 EGHTEAVISVAFSPTGKYLASGSGDTTVRFWD---------LSTETPQFTAKGHRHW--- 171
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI---QTWGPVTALSFRT--DGPPM 219
V + SP + G N +I L + T + + W +T L + P
Sbjct: 172 VLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKW--ITCLCWEPLHINPEC 229
Query: 220 --MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIF 277
+ S S G + +W+ + + +I H + VT + + LL +SS D T+K+W
Sbjct: 230 RYLASASKDGSIRIWDTLMGRCD-KILTGHTQSVTCVKW-GGDGLLYSSSQDRTIKVW-- 285
Query: 278 DKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL 311
+G L R +GH+ +++ S+D +L
Sbjct: 286 --RSQDGILCRTLQGHA---HWVNTMALSTDYVL 314
>UNIPROTKB|Q8NAA4 [details] [associations]
symbol:ATG16L2 "Autophagy-related protein 16-2"
species:9606 "Homo sapiens" [GO:0006914 "autophagy" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000112569
HOVERGEN:HBG050534 InterPro:IPR013923 Pfam:PF08614 GO:GO:0006914
EMBL:AK093017 EMBL:AK090597 EMBL:CH471076 EMBL:BC036713
EMBL:BC137489 EMBL:BC137490 EMBL:BC142718 EMBL:BC146660
EMBL:AL832974 IPI:IPI00300536 IPI:IPI00892538 IPI:IPI00892678
RefSeq:NP_203746.1 UniGene:Hs.653186 ProteinModelPortal:Q8NAA4
SMR:Q8NAA4 IntAct:Q8NAA4 PhosphoSite:Q8NAA4 DMDM:189027648
PRIDE:Q8NAA4 Ensembl:ENST00000321297 GeneID:89849 KEGG:hsa:89849
UCSC:uc001otd.3 CTD:89849 GeneCards:GC11P072525 H-InvDB:HIX0009913
HGNC:HGNC:25464 HPA:HPA045444 neXtProt:NX_Q8NAA4
PharmGKB:PA142672575 InParanoid:Q8NAA4 OrthoDB:EOG44F68R
PhylomeDB:Q8NAA4 GenomeRNAi:89849 NextBio:76342 ArrayExpress:Q8NAA4
Bgee:Q8NAA4 CleanEx:HS_ATG16L2 Genevestigator:Q8NAA4 Uniprot:Q8NAA4
Length = 619
Score = 113 (44.8 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 31/113 (27%), Positives = 55/113 (48%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGI-SFFRTHQESSMLAVCLDDFTVNII 529
+ I+ISG NDQ ++ W + G + I + + S +H + +L+ C D T+ +I
Sbjct: 473 DHIIISGHNDQKIRFWDSR--GPHCTQVIPVQGRVTSLSLSHDQLHLLS-CSRDNTLKVI 529
Query: 530 DIDTCTI--IRKLSGHM--GQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
D+ I + + G T A FSPD + + S D + +WD+ + +L
Sbjct: 530 DLRVSNIRQVFRADGFKCGSDWTKAVFSPDRSYALAGSCDGALYIWDVDTGKL 582
Score = 91 (37.1 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 31/120 (25%), Positives = 54/120 (45%)
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTW----GPVTALSFRTDGPPMM 220
VN + P ++ G +++ I L N++ S +E QT G +T++ F G ++
Sbjct: 339 VNAVRFGPNSSLLATGGADRLIHLWNVVG--SRLEANQTLEGAGGSITSVDFDPSGYQVL 396
Query: 221 VSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA 280
+ N +W + + Q + + H+ VT A F VT S D T+K W +A
Sbjct: 397 AATYNQA-AQLWKVGEAQSKETLS-GHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRA 454
Score = 52 (23.4 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 21/90 (23%), Positives = 33/90 (36%)
Query: 246 AHRKVVTGAHFLYNEPLLVTSSPDNTLKLW--IFDKADGNGRLLRIREGHSAPPNYIQFY 303
AH V F N LL T D + LW + + + N L EG + F
Sbjct: 334 AHLSEVNAVRFGPNSSLLATGGADRLIHLWNVVGSRLEANQTL----EGAGGSITSVDF- 388
Query: 304 GNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
S +L+A + +++ S + L
Sbjct: 389 DPSGYQVLAATYNQAAQLWKVGEAQSKETL 418
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 126 (49.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 34/129 (26%), Positives = 61/129 (47%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESS 515
GH + V+ L I+ S D T+KVW + +TG+ R++K + ++
Sbjct: 104 GHRLPITRVIFHPLWTIMASCSEDATIKVWDY-ETGQLE-RTLKGHTDAVNDIAIDAAGK 161
Query: 516 MLAVCLDDFTVNIIDI-DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
L C D ++ + D T ++ L GH ++ F P ++++AS D TI+ WDI
Sbjct: 162 QLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDIS 221
Query: 575 SSQLIDCFQ 583
+ + F+
Sbjct: 222 TGYCVYTFR 230
Score = 109 (43.4 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 24/104 (23%), Positives = 48/104 (46%)
Query: 469 NLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNI 528
N I+ SG D+++K W+ TG + +N + H + L DD T+ +
Sbjct: 300 NSTHILFSGSRDRSIKAWNIN-TGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRV 358
Query: 529 IDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ ++ + H ++ F S ++IT S+D + +VW+
Sbjct: 359 WELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWE 402
Score = 106 (42.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 54/225 (24%), Positives = 93/225 (41%)
Query: 375 NNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC--GNFVLIGYS 432
N+IA GK VS S K+ D + K K + T +T G+FVL
Sbjct: 152 NDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASR 211
Query: 433 SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFK-QT 491
+ +++I +G Y GH VR + N + S DQTV VW F ++
Sbjct: 212 DHTIKQWDISTG-----YCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKS 266
Query: 492 GKPPLR----SIKL-----DNGISFFRTHQ-ESSMLAVCLD---DFTVNIIDIDTCTIIR 538
K LR +++ D + Q E + + D ++ +I+T ++
Sbjct: 267 AKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLF 326
Query: 539 KLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
L H + F P ++LI+ + D T+RVW++ + + + +
Sbjct: 327 TLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIE 371
Score = 90 (36.7 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265
P+T + F +M S S + VW+ E Q+E +K H V LV+
Sbjct: 108 PITRVIFHPLWT-IMASCSEDATIKVWDYETGQLERTLK-GHTDAVNDIAIDAAGKQLVS 165
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLR 320
S D ++KLW F + L+ +GH + + F + D +LSA+ D T++
Sbjct: 166 CSSDLSIKLWDFGQTYD---CLKSLKGHEHTVSSVTFLP-TGDFVLSASRDHTIK 216
Score = 69 (29.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 21/87 (24%), Positives = 42/87 (48%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E Q HR +T F ++ + S D T+K+W ++ G+L R +GH+
Sbjct: 95 RPPETQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYE----TGQLERTLKGHTDA 150
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFN 323
N I + ++S + D ++++++
Sbjct: 151 VNDIAIDA-AGKQLVSCSSDLSIKLWD 176
Score = 55 (24.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 109 GHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAE--ETYLELSFD--ND-TFKIMGKRW 161
GH P+ ++ P + S E++ +KVWD + E L+ D ND GK+
Sbjct: 104 GHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQL 163
Query: 162 NSC 164
SC
Sbjct: 164 VSC 166
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 108 (43.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 64/281 (22%), Positives = 117/281 (41%)
Query: 64 KLLSVSPQHEDDITC--LSSDFFHIYT-SANNIIYAWRRGI-DIVGTYKGHTSPVHL--I 117
KLL + HED++ C S+D I T S + + W ++V Y H+ V+
Sbjct: 651 KLLEIKA-HEDEVLCCAFSADDKFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHF 709
Query: 118 LPFGPHLISVDEESN--VKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVL---EPSP 172
HL+ ++ +K+WD+ EE + F + T + R++ VL
Sbjct: 710 TNNSNHLLLATGSNDYFLKLWDLNQEECRNTM-FGH-TNSVSHCRFSPDDQVLASCSADG 767
Query: 173 VVDIIGVGLSN--KKI-ILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHL 229
+ + V +N K I + L E E ++ V S+ DG +MV+ N L
Sbjct: 768 TLKLWDVKSANERKSINVKQFFLNSEEPQEDLEVI--VKCCSWSADGAKIMVAAKNKVFL 825
Query: 230 TVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI 289
+++ + ++ H V F + L V + ++LW D +G +
Sbjct: 826 --FDIHSSGLLAEMHMGHHSAVQYCDFSPHNHLAVVALSQYCVELWSMD----SGLKVAD 879
Query: 290 REGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
GH + + + F + S + L+++ D T+R++ TK N
Sbjct: 880 CRGHLSWVHCVMFSPDGS-SFLTSSDDQTIRLWETKKVCKN 919
Score = 107 (42.7 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 38/157 (24%), Positives = 70/157 (44%)
Query: 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN 241
++K + + T E L+E V +F D + + S + +WN ++
Sbjct: 637 ADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDK-FIATCSVDKKVKIWNSMTGELV- 694
Query: 242 QIKKAHRKVVTGAHFLYNEP--LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNY 299
+I H + V HF N LL T S D LKLW ++ + + GH+ ++
Sbjct: 695 RIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLWDLNQEECRNTMF----GHTNSVSH 750
Query: 300 IQFYGNSSDNIL-SAAGDSTLRIFNTKSETSNKNLGI 335
+F + D +L S + D TL++++ KS K++ +
Sbjct: 751 CRF--SPDDQVLASCSADGTLKLWDVKSANERKSINV 785
Score = 90 (36.7 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 29/115 (25%), Positives = 51/115 (44%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH VR + + +IS +D V++W++ Q+ P + + FR + S +
Sbjct: 1003 GHKTTVRHIQFTADGKTLISSSDDSAVQIWNW-QSEDPFFLQAHQET-VKDFRLLKNSRL 1060
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
L+ D TV + +I T I + H + D S D+ + S D T ++W
Sbjct: 1061 LSWSFDG-TVKVWNIITRRIEKDFVCHQDTVLSCDISSDATKFSSTSADKTAKIW 1114
Score = 90 (36.7 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 34/118 (28%), Positives = 55/118 (46%)
Query: 212 FRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271
F DG + G++ L V+ E + +IK AH V F ++ + T S D
Sbjct: 625 FSEDGQRIASCGADKT-LQVFKAETGEKLLEIK-AHEDEVLCCAFSADDKFIATCSVDKK 682
Query: 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG--DSTLRIFNTKSE 327
+K+W G L+RI + HS N F N+S+++L A G D L++++ E
Sbjct: 683 VKIW----NSMTGELVRIYDEHSEQVNCCHFT-NNSNHLLLATGSNDYFLKLWDLNQE 735
Score = 81 (33.6 bits), Expect = 7.9e-07, Sum P(3) = 7.9e-07
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 508 FRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCT 567
F H +++A L + V + +D+ + GH+ + FSPD +T+S D T
Sbjct: 850 FSPHNHLAVVA--LSQYCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQT 907
Query: 568 IRVWD 572
IR+W+
Sbjct: 908 IRLWE 912
Score = 79 (32.9 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 24/109 (22%), Positives = 50/109 (45%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
N ++S D TVKVW+ T + + + + +++ + D T I
Sbjct: 1057 NSRLLSWSFDGTVKVWNII-TRRIEKDFVCHQDTVLSCDISSDATKFSSTSADKTAKIWS 1115
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ + + +L GH G + + FS ++ L T + IR+W++ + +L+
Sbjct: 1116 FELLSPLHELRGHKGCVRCSSFSVNNTLLATGDDNGEIRIWNVSNGELL 1164
Score = 76 (31.8 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 51/246 (20%), Positives = 100/246 (40%)
Query: 44 ETLFVTC-VGKAFHVYGCNHFKLLSVSPQHEDDITCL----SSDFFHIYTSANN-IIYAW 97
+ TC V K ++ +L+ + +H + + C +S+ + T +N+ + W
Sbjct: 671 DKFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLW 730
Query: 98 RRGIDIV-GTYKGHTSPV-HL-ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTF 154
+ T GHT+ V H P L S + +K+WD+K+ S + F
Sbjct: 731 DLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANE--RKSINVKQF 788
Query: 155 KIMGKRWNSCVNVLEP--SPVVDIIGVGLSNK-KIILHNILTDESLMEFIQTWGPVTALS 211
+ + + V+ S D + ++ K K+ L +I + L E G +A+
Sbjct: 789 FLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKNKVFLFDIHSSGLLAEMHM--GHHSAVQ 846
Query: 212 FRTDGPP--MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD 269
+ P + V + + +W++ D ++ + H V F + +TSS D
Sbjct: 847 YCDFSPHNHLAVVALSQYCVELWSM-DSGLKVADCRGHLSWVHCVMFSPDGSSFLTSSDD 905
Query: 270 NTLKLW 275
T++LW
Sbjct: 906 QTIRLW 911
Score = 75 (31.5 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
N R+ + R GH +IQF + ++S++ DS ++I+N +SE
Sbjct: 994 NNRIFQSRNGHKTTVRHIQFTADGK-TLISSSDDSAVQIWNWQSE 1037
Score = 72 (30.4 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 29/115 (25%), Positives = 53/115 (46%)
Query: 480 DQTVKVWHFKQTGKPPLRSIKLDNGI---SFFRTHQESSMLAVCLDDFTVNIIDIDT--- 533
D+T K+W F+ PL ++ G S F + +++LA D+ + I ++
Sbjct: 1108 DKTAKIWSFELLS--PLHELRGHKGCVRCSSFSVN--NTLLATGDDNGEIRIWNVSNGEL 1163
Query: 534 ---CTIIRKLSG---HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
C I G H G +TD FSPD++ L++A ++ W++ + + F
Sbjct: 1164 LHLCAPISVEEGAATHGGWVTDLCFSPDTKMLVSAGG--YLKWWNVVTGESSQTF 1216
Score = 69 (29.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 12/51 (23%), Positives = 28/51 (54%)
Query: 522 DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+D + I+++ I + +GH + F+ D + LI++S D +++W+
Sbjct: 983 EDGAIQILELLNNRIFQSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWN 1033
Score = 67 (28.6 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 26/127 (20%), Positives = 57/127 (44%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH+ V V+ ++ +DQT+++W K+ K +K + + F QE+ +
Sbjct: 882 GHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSATVLKQEIDVVF----QENEV 937
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDAD-----FSPDSRWLITASMDCTIRVW 571
+ +D+ I +I +G + LT+A SP ++L D I++
Sbjct: 938 TVLAVDN-------IRRLQLINGNTGQIDYLTEAQVSCCCLSPHLQYLAFGGEDGAIQIL 990
Query: 572 DIPSSQL 578
++ ++++
Sbjct: 991 ELLNNRI 997
Score = 59 (25.8 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 24/89 (26%), Positives = 40/89 (44%)
Query: 62 HFKLLSVSPQHEDDITCLSSDFFHIYTSAN--NIIYAWRRGIDIVGTYKGHTSPVHLILP 119
H +L S+SP ED + S +H+ SAN + A +D + P HLI
Sbjct: 469 HHQLYSLSPDQEDCMYWYSFLAYHM-ASANMHKELCALMFSLDWIKAKTELVGPAHLIHE 527
Query: 120 FGPHLISVDEESNVKVWDIKAEETYLELS 148
F + +DE+ + D + + +L L+
Sbjct: 528 FVEYRHILDEKDGI---DCENFQEFLSLN 553
>WB|WBGene00000773 [details] [associations]
symbol:cpf-1 species:6239 "Caenorhabditis elegans"
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040010 "positive regulation
of growth rate" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0040027 HOGENOM:HOG000234077 KO:K14406
GeneTree:ENSGT00700000104487 GO:GO:0001703 EMBL:Z68315 PIR:T21482
RefSeq:NP_495822.1 ProteinModelPortal:Q19864 SMR:Q19864
STRING:Q19864 PaxDb:Q19864 EnsemblMetazoa:F28C6.3 GeneID:174378
KEGG:cel:CELE_F28C6.3 UCSC:F28C6.3 CTD:174378 WormBase:F28C6.3
InParanoid:Q19864 OMA:TKFITTH NextBio:883778 Uniprot:Q19864
Length = 430
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 37/130 (28%), Positives = 66/130 (50%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG-KPPLRSIKLDNGISFFRTHQESSM 516
HV V V+ + I+ISG ND+TVK++ F +T K ++++ + H
Sbjct: 169 HVDDVNTVIFHPRDSILISGSNDKTVKLFDFSKTAVKKAMKTLSEVYPVRALSCHPGGEF 228
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSG---HMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
L V D TV + +I+T + H +TD +S ++R +TAS D +++WD
Sbjct: 229 LLVATDHPTVRLYNIETAQAYASANPDDQHTESVTDVHYSENARLYVTASKDGHVKIWDG 288
Query: 574 PSSQLIDCFQ 583
S++ ++ F+
Sbjct: 289 VSNRCVETFK 298
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 128 (50.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL------Y 258
G VT+++ + P ++S S + VW L + KAHR + +HF+ +
Sbjct: 22 GFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSP-GKAHRSLKGHSHFVQDVVISH 80
Query: 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGD 316
+ ++ S DNTL+LW K G R+ +GH+ + F SSDN I+S + D
Sbjct: 81 DGQFALSGSWDNTLRLWDITK----GVSTRLFKGHTQDVMSVAF---SSDNRQIISGSRD 133
Query: 317 STLRIFNTKSE 327
+T++++NT E
Sbjct: 134 ATIKVWNTLGE 144
Score = 118 (46.6 bits), Expect = 0.00047, P = 0.00047
Identities = 38/123 (30%), Positives = 55/123 (44%)
Query: 457 GHVGGVRGV-VSDNLNQIVISGGNDQTVKVWHFKQT-GKPPLRSIKLDNGISFFR----- 509
GH G V + VS +IS D+TV VW T P ++ + G S F
Sbjct: 19 GHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVI 78
Query: 510 THQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIR 569
+H L+ D+ T+ + DI R GH + FS D+R +I+ S D TI+
Sbjct: 79 SHDGQFALSGSWDN-TLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIK 137
Query: 570 VWD 572
VW+
Sbjct: 138 VWN 140
Score = 66 (28.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 24/107 (22%), Positives = 47/107 (43%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNIIDID 532
++SG D VK+W K ++ G ++ + S+ A D + ++
Sbjct: 171 IVSGSWDNKVKIWDIKSFKCN--HTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELS 228
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ + KL + FSP+ WL +A+ D I +WD+ + Q++
Sbjct: 229 SGKPLYKLEAR-NTINALAFSPNKYWL-SAATDDKIIIWDLLTKQVL 273
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 114 (45.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 49/199 (24%), Positives = 84/199 (42%)
Query: 390 WSFYKSKMDDMFLVPERCKQAKQSKPTCVYIT--HCGNFVLIGYSSGHVDRFNIQSGAHR 447
W Y S D R AK K C++I H + S+ HV ++SGA
Sbjct: 282 W-IYSSSYDKTI----RIWDAKDGK--CLHILKGHAARVNHLSLSTEHV----LRSGA-- 328
Query: 448 GSYGH-DNQPGHVGGVRGVVSDN----LNQI---VISGGNDQTVKVWHFKQTGKPPLRSI 499
Y H D +P R + L Q ++S +D + +W +++ KP +
Sbjct: 329 --YDHTDFKPKSFSDERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMH 386
Query: 500 KLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWL 559
++ + +A D +V + D T + L GH+ + +S DSR L
Sbjct: 387 GHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLL 446
Query: 560 ITASMDCTIRVWDIPSSQL 578
+++S D T++VWD+ S ++
Sbjct: 447 VSSSQDTTLKVWDVRSKKM 465
Score = 101 (40.6 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 34/117 (29%), Positives = 59/117 (50%)
Query: 204 WGPVTALSFRTD-GPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPL 262
W P L D GP ++ SGS + +WN++ R + + H +T + +
Sbjct: 228 WQP---LHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLS-GHTAPITCVRW-GGQNW 282
Query: 263 LVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL-SAAGDST 318
+ +SS D T+++W D DG + L I +GH+A N++ S++++L S A D T
Sbjct: 283 IYSSSYDKTIRIW--DAKDG--KCLHILKGHAARVNHLSL---STEHVLRSGAYDHT 332
Score = 99 (39.9 bits), Expect = 9.4e-07, Sum P(3) = 9.4e-07
Identities = 30/109 (27%), Positives = 56/109 (51%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
+VS S+ L +W+ + H+KVV A F + + T+S D++++LW
Sbjct: 361 LVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLW---- 416
Query: 280 ADGN-GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
DG G+ L GH A Y + S ++S++ D+TL++++ +S+
Sbjct: 417 -DGKTGKFLATLRGHVAAV-YQCAWSTDSRLLVSSSQDTTLKVWDVRSK 463
Score = 87 (35.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 35/130 (26%), Positives = 55/130 (42%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264
G + + F +V+GS +W+ D Q K H V+ + + ++
Sbjct: 135 GTIISAQFSPSTSSRLVTGSGDFTARLWDC-DTQTPIATMKGHTNWVSCVAWAPDASIIA 193
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFY----GNSSDNILSAAG--DST 318
T S DNT++ W K G LR R H+ P + + S L A+G D+T
Sbjct: 194 TGSMDNTIRFWDPKKGSPIGDALR-R--HTKPIMALCWQPLHLAPDSGPYLLASGSKDNT 250
Query: 319 LRIFNTKSET 328
+RI+N K T
Sbjct: 251 VRIWNVKLRT 260
Score = 82 (33.9 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 24/94 (25%), Positives = 48/94 (51%)
Query: 480 DQTVKVWHFKQTGKPPLRSIKLDNGISFFRT--HQESSMLAVCLDDFTVNIIDIDTCTII 537
D +V++W K TGK L +++ + + ++ +S +L D T+ + D+ + +
Sbjct: 410 DSSVRLWDGK-TGKF-LATLR-GHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMK 466
Query: 538 RKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
L GH Q+ D+SPD + + + D +R+W
Sbjct: 467 FDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 79 (32.9 bits), Expect = 9.4e-07, Sum P(3) = 9.4e-07
Identities = 30/119 (25%), Positives = 53/119 (44%)
Query: 57 VYGCNHFKLLSVSPQHEDDITCLS--SDFFHIYT-SANNIIYAW--RRGIDIVGTYKGHT 111
++ C+ ++ H + ++C++ D I T S +N I W ++G I + HT
Sbjct: 161 LWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHT 220
Query: 112 SPV--------HLILPFGPHLISVDEESN-VKVWDIKAEETYLELSFDNDTFKIMGKRW 161
P+ HL GP+L++ + N V++W++K LS T I RW
Sbjct: 221 KPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLS--GHTAPITCVRW 277
Score = 74 (31.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRI 321
LL + S DNT+++W LL GH+AP +++ G + I S++ D T+RI
Sbjct: 241 LLASGSKDNTVRIWNVKLRT----LLFTLSGHTAPITCVRWGGQNW--IYSSSYDKTIRI 294
Query: 322 FNTK 325
++ K
Sbjct: 295 WDAK 298
Score = 55 (24.4 bits), Expect = 9.4e-07, Sum P(3) = 9.4e-07
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
PGH V V Q V SGG D+ V++W
Sbjct: 470 PGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 51 (23.0 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 292 GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328
GH QF ++S +++ +GD T R+++ ++T
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQT 168
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 118 (46.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 30/116 (25%), Positives = 58/116 (50%)
Query: 475 ISGGNDQTVKVWHFKQTGKPP-----LRSIKLDNGISFFRTHQESS-MLAVCLDDFTVNI 528
+S D +++ F TGK P + L+N + + S M+ DD+T+ +
Sbjct: 326 LSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFL 385
Query: 529 ID-IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
+ + + I +++GH + FSPD R++++AS D +I++WD + I F+
Sbjct: 386 WNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFR 441
Score = 104 (41.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 27/113 (23%), Positives = 55/113 (48%)
Query: 469 NLNQIVISGGNDQTVKVWHFKQTGKPPLRSI---KLDNGISFFRTHQESSMLAVCLDDFT 525
N +++++ +D T+ +W+ ++ KP R KL N ++F + + D +
Sbjct: 369 NSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAF---SPDGRYIVSASFDNS 425
Query: 526 VNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ + D I GH+ + +S D R L++ S D T++VWD+ + +L
Sbjct: 426 IKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKL 478
Score = 89 (36.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 28/117 (23%), Positives = 51/117 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS- 515
GH V V + ++S D ++K+W + GK S + S ++ S
Sbjct: 400 GHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRD-GK--FISTFRGHVASVYQVAWSSDC 456
Query: 516 -MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+L C D T+ + D+ T + L GH ++ D+S D + + + D +R+W
Sbjct: 457 RLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 83 (34.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 33/116 (28%), Positives = 52/116 (44%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
MV+G+ +W+ D Q K H V + + ++ T S DNT++LW D
Sbjct: 159 MVTGAGDNTARIWDC-DTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLW--DP 215
Query: 280 ADGN--GRLLRIREGHSA-------PPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
G G LR GHS P ++ G S + S++ D T++I++T S
Sbjct: 216 KSGQCLGDALR---GHSKWITSLSWEPIHLVKPG-SKPRLASSSKDGTIKIWDTVS 267
Score = 74 (31.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 60/245 (24%), Positives = 98/245 (40%)
Query: 48 VTCVG-KAFHVYGCNHFKLLSVSPQHEDDITCLS--SDFFHIYT-SANNIIYAW--RRGI 101
VT G ++ C+ + H + + C+S D I T S +N I W + G
Sbjct: 160 VTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQ 219
Query: 102 DIVGTYKGH----TS----PVHLILPFG-PHLISVDEESNVKVWDIKAEETYLELSFDND 152
+ +GH TS P+HL+ P P L S ++ +K+WD + +S
Sbjct: 220 CLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMS--GH 277
Query: 153 TFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSF 212
T + +W +L + V N + NIL + W V LS
Sbjct: 278 TNSVSCVKWGG-QGLLYSGSHDRTVRVWDINSQGRCINILKSHA------HW--VNHLSL 328
Query: 213 RTDGPPMMVSGSNTGHL--TVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDN 270
TD + + +TG T + + +EN +K +K G +E ++VT+S D
Sbjct: 329 STDYALRIGAFDHTGKKPSTPEEAQKKALENY-EKICKK--NGN----SEEMMVTASDDY 381
Query: 271 TLKLW 275
T+ LW
Sbjct: 382 TMFLW 386
Score = 52 (23.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 292 GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328
GH + F ++S +++ AGD+T RI++ ++T
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQT 177
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 125 (49.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 34/135 (25%), Positives = 56/135 (41%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG--------KPPLRSIKLDNGISFF 508
GH V + D ++ S +D T+K+W KQ + +IK
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGT 406
Query: 509 RTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
+ MLA D TV + D+D I L+ H + FSPD R+L + S D +
Sbjct: 407 NNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCV 466
Query: 569 RVWDIPSSQLIDCFQ 583
+W+ + L+ ++
Sbjct: 467 HIWNTQTGALVHSYR 481
Score = 75 (31.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 44/170 (25%), Positives = 63/170 (37%)
Query: 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN 241
SNK ++L ES + FI W PV+ L + SGS +WNL +
Sbjct: 159 SNKAVVLRG---HESEV-FICAWNPVSDL---------LASGSGDSTARIWNLSENSTSG 205
Query: 242 --QIKKAH-----------RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLR 288
Q+ H K VT + LL T S D ++W DGN L
Sbjct: 206 PTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT---KDGN---LA 259
Query: 289 IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
G P + + + ILSA D T I++ + + + SA
Sbjct: 260 STLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSA 309
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT-GKPPLRSIKLDNGISFFRTHQESS 515
GH + + + + D+TVK+W+ + L KL G++ +S
Sbjct: 85 GHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKL--GVNDIAWSSDSR 142
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+ DD T+ I +I T + + L GH + +F+P S +++ S D ++R+WD+ +
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 576 SQLI 579
I
Sbjct: 203 GMCI 206
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 61/276 (22%), Positives = 110/276 (39%)
Query: 59 GCNHFKLLSVSPQHEDDITCLSSDFFHIY---TSANNIIYAWRRGIDIVG-TYKGHTSPV 114
G ++KL+ H I+ Y +SA+ + W I T GH V
Sbjct: 73 GSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGV 132
Query: 115 HLILPFGPH--LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSP 172
+ I ++S ++ +K+++I L N+ + C N +P
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNN--------YVFCCNF---NP 181
Query: 173 VVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVW 232
++ G ++ + + ++ T + PV+A+SF DG ++ SGS G + +W
Sbjct: 182 QSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGS-LIASGSYDGLVRIW 240
Query: 233 NLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREG 292
+ + Q + V F N ++ S+ D+TLKLW F K G+ L+ G
Sbjct: 241 DTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSK----GKTLKQYTG 296
Query: 293 HSAPPNYI--QFYGNSSDNILSAAGDSTLRIFNTKS 326
H I F I+S + D + I+N ++
Sbjct: 297 HENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQT 332
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 33/124 (26%), Positives = 57/124 (45%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH GV + + ++ V+S +D+T+K+ F+ +++K N F S
Sbjct: 127 GHKLGVNDIAWSSDSRCVVSASDDKTLKI--FEIVTSRMTKTLKGHNNYVFCCNFNPQSS 184
Query: 517 LAVCLD-DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
L V D +V I D+ T I+ L H ++ F+ D + + S D +R+WD +
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTAN 244
Query: 576 SQLI 579
Q I
Sbjct: 245 GQCI 248
Score = 109 (43.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 28/132 (21%), Positives = 58/132 (43%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQES 514
P H V V + ++ SG D V++W G+ + +N ++F +
Sbjct: 210 PAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD-TANGQCIKTLVDDENPPVAFVKFSPNG 268
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ--LTDADFS-PDSRWLITASMDCTIRVW 571
+ D T+ + D +++ +GH A+FS +W+I+ S DC I +W
Sbjct: 269 KYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIW 328
Query: 572 DIPSSQLIDCFQ 583
++ + +++ C +
Sbjct: 329 NLQTREIVQCLE 340
Score = 88 (36.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 28/89 (31%), Positives = 40/89 (44%)
Query: 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304
+ H K ++ A F L TSS D T+K+W D R GH N I +
Sbjct: 84 EGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICE----RTLTGHKLGVNDIA-WS 138
Query: 305 NSSDNILSAAGDSTLRIFNTKSETSNKNL 333
+ S ++SA+ D TL+IF + K L
Sbjct: 139 SDSRCVVSASDDKTLKIFEIVTSRMTKTL 167
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT-GKPPLRSIKLDNGISFFRTHQESS 515
GH + + + + D+TVK+W+ + L KL G++ +S
Sbjct: 85 GHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKL--GVNDIAWSSDSR 142
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+ DD T+ I +I T + + L GH + +F+P S +++ S D ++R+WD+ +
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 576 SQLI 579
I
Sbjct: 203 GMCI 206
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 61/276 (22%), Positives = 110/276 (39%)
Query: 59 GCNHFKLLSVSPQHEDDITCLSSDFFHIY---TSANNIIYAWRRGIDIVG-TYKGHTSPV 114
G ++KL+ H I+ Y +SA+ + W I T GH V
Sbjct: 73 GSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGV 132
Query: 115 HLILPFGPH--LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSP 172
+ I ++S ++ +K+++I L N+ + C N +P
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNN--------YVFCCNF---NP 181
Query: 173 VVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVW 232
++ G ++ + + ++ T + PV+A+SF DG ++ SGS G + +W
Sbjct: 182 QSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGS-LIASGSYDGLVRIW 240
Query: 233 NLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREG 292
+ + Q + V F N ++ S+ D+TLKLW F K G+ L+ G
Sbjct: 241 DTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSK----GKTLKQYTG 296
Query: 293 HSAPPNYI--QFYGNSSDNILSAAGDSTLRIFNTKS 326
H I F I+S + D + I+N ++
Sbjct: 297 HENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQT 332
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 33/124 (26%), Positives = 57/124 (45%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH GV + + ++ V+S +D+T+K+ F+ +++K N F S
Sbjct: 127 GHKLGVNDIAWSSDSRCVVSASDDKTLKI--FEIVTSRMTKTLKGHNNYVFCCNFNPQSS 184
Query: 517 LAVCLD-DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
L V D +V I D+ T I+ L H ++ F+ D + + S D +R+WD +
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTAN 244
Query: 576 SQLI 579
Q I
Sbjct: 245 GQCI 248
Score = 109 (43.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 28/132 (21%), Positives = 58/132 (43%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQES 514
P H V V + ++ SG D V++W G+ + +N ++F +
Sbjct: 210 PAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD-TANGQCIKTLVDDENPPVAFVKFSPNG 268
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ--LTDADFS-PDSRWLITASMDCTIRVW 571
+ D T+ + D +++ +GH A+FS +W+I+ S DC I +W
Sbjct: 269 KYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIW 328
Query: 572 DIPSSQLIDCFQ 583
++ + +++ C +
Sbjct: 329 NLQTREIVQCLE 340
Score = 88 (36.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 28/89 (31%), Positives = 40/89 (44%)
Query: 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304
+ H K ++ A F L TSS D T+K+W D R GH N I +
Sbjct: 84 EGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICE----RTLTGHKLGVNDIA-WS 138
Query: 305 NSSDNILSAAGDSTLRIFNTKSETSNKNL 333
+ S ++SA+ D TL+IF + K L
Sbjct: 139 SDSRCVVSASDDKTLKIFEIVTSRMTKTL 167
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 138 (53.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQ 512
GH+ V V + + +G D+TV++W +Q G S++L G +
Sbjct: 442 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-GN----SVRLFTGHRGPVLSLAFSP 496
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
LA +D + + D+ + T+ ++L GH +T FSPDS + +ASMD ++RVWD
Sbjct: 497 NGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWD 556
Query: 573 I 573
I
Sbjct: 557 I 557
Score = 128 (50.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 32/105 (30%), Positives = 53/105 (50%)
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDN--GISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
SG +D+T ++W F +T PLR I + + + H S+ LA D TV +
Sbjct: 419 SGSHDRTARLWSFDRTY--PLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 475
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+R +GH G + FSP+ ++L +A D +++WD+ S L
Sbjct: 476 GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 520
Score = 63 (27.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 278 DKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETS 329
D+ D G ++I GH P +F +SS +LS + D ++R ++ S T+
Sbjct: 344 DEDDNAGTEMKILRGHCGPVYSTRFLADSS-GLLSCSEDMSIRYWDLGSFTN 394
Score = 45 (20.9 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
E +I + H V FL + L++ S D +++ W D +L +GH+ P
Sbjct: 352 EMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYW--DLGSFTNTVLY--QGHAYP 404
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 113 (44.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG--KPPLRSIK-LDNGISFFRTHQE 513
GH V + D L+ V+SG D +++VW +TG K L + L +G+
Sbjct: 1153 GHTNRVYSLQFDGLH--VVSGSLDTSIRVWDV-ETGNCKHTLMGHQSLTSGMEL-----R 1204
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSG---HMGQLTDADFSPDSRWLITASMDCTIRV 570
++L D TV + DI T ++ LSG H +T F+ SR+++T+S D T+++
Sbjct: 1205 QNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFN--SRFVVTSSDDGTVKL 1262
Query: 571 WDIPSSQLI 579
WD+ + I
Sbjct: 1263 WDVKTGDFI 1271
Score = 97 (39.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 33/101 (32%), Positives = 49/101 (48%)
Query: 228 HLTVWNLEDRQVEN-QIKKAHRK-VVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGR 285
H+ N R V ++ K H V+T F N +V+ S DNTLK+W + NG+
Sbjct: 973 HIIEMNWRSRPVRKPKVLKGHDDHVITCLQFSGNR--IVSGSDDNTLKVW----SAVNGK 1026
Query: 286 LLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
LR GH+ Q GN I+S + D TL++++ S
Sbjct: 1027 CLRTLVGHTGGVWSSQMSGNI---IISGSTDRTLKVWDMDS 1064
Score = 93 (37.8 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 29/117 (24%), Positives = 58/117 (49%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+T L F + +VSGS+ L VW+ + + + H V + N ++++
Sbjct: 998 ITCLQFSGN---RIVSGSDDNTLKVWSAVNGKCLRTLV-GHTGGVWSSQMSGN--IIISG 1051
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
S D TLK+W D +G + +GH++ + +G+ ++S + D+TLR+++
Sbjct: 1052 STDRTLKVWDMD----SGACVHTLQGHTSTVRCMHLHGSK---VVSGSRDATLRVWD 1101
Score = 86 (35.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 28/109 (25%), Positives = 54/109 (49%)
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
+++SGS L VW+++ + ++ H V H L+ + V+ S D TL++W +
Sbjct: 1047 IIISGSTDRTLKVWDMDSGACVHTLQ-GHTSTVRCMH-LHGSKV-VSGSRDATLRVWDIE 1103
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
+ G L + GH A +Q+ G I+S A D ++I++ + +
Sbjct: 1104 Q----GSCLHVLVGHLAAVRCVQYDGKL---IVSGAYDYMVKIWHPERQ 1145
Score = 67 (28.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 104 VGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIK 139
V T +GHTS V + G ++S ++ ++VWDI+
Sbjct: 1068 VHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIE 1103
Score = 64 (27.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 25/89 (28%), Positives = 36/89 (40%)
Query: 72 HEDD-ITCLSSDFFHIYT-SANNIIYAWRR-GIDIVGTYKGHTSPVHLILPFGPHLISVD 128
H+D ITCL I + S +N + W + T GHT V G +IS
Sbjct: 993 HDDHVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNIIISGS 1052
Query: 129 EESNVKVWDIKAEETYLELSFDNDTFKIM 157
+ +KVWD+ + L T + M
Sbjct: 1053 TDRTLKVWDMDSGACVHTLQGHTSTVRCM 1081
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 148 (57.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 95/404 (23%), Positives = 159/404 (39%)
Query: 207 VTALSFRTDGPPMMVSG-SNTGHLTVWNLEDRQVENQIK--KAHRKVVTGAHFLYN-EPL 262
++ SF DG + S NT + VW+L V NQI K H + V F L
Sbjct: 1567 ISCFSFSDDGKTLASSSWDNT--VIVWDLI---VGNQIHQFKDHSRAVNYCEFSPTANNL 1621
Query: 263 LVTSSPDNTLKLWIFDKADGNGRLLR-IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRI 321
L++ + D+++ IF+ +D N + R R HS P N + I S++ D T++I
Sbjct: 1622 LMSCAWDSSII--IFNTSDKN--IFRNFRSAHSKPVNSC-CWSPDGTLIASSSWDGTIKI 1676
Query: 322 FN---TKSETSNKNL--------GIASAXXXXXXXXXXXEKMNEKFILPPV-SQFSFGLA 369
+N T ++ K++ I S M +L V SQ +
Sbjct: 1677 WNPFDTIAKDRLKHVIDASLSYGSIKSCKFSANSKQILATTMKNDVLLFDVNSQKLISVM 1736
Query: 370 --REKDWNNIAA------IHTGKNKVS--LWSFYKSKMDDMFLVPERCKQAKQSKPTCVY 419
K N+ + I TG + + +WS FL+P C C+
Sbjct: 1737 GNHSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLGTQLTNFLIPGDCWA------NCLA 1790
Query: 420 ITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN 479
+ + +G + V F++ S + GH + + ++ S
Sbjct: 1791 FSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLH--GHTRAITSITFSPSGNLIASTSE 1848
Query: 480 DQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQESSMLAVCLDDFTVNIIDIDTCT 535
D +KVW+ QT K K N ISF T+ E +++ C DD++ + T +
Sbjct: 1849 DLLIKVWNV-QTHKAEYTIEKAHNDPINCISFNPTN-ECELIS-CSDDYSTKVWSRFTTS 1905
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
G + +SPD +++ T S DC+I V+ S +L+
Sbjct: 1906 TTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAVYLCSSKKLL 1949
Score = 124 (48.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 46/194 (23%), Positives = 87/194 (44%)
Query: 88 TSANNIIYAWRRGIDIVGTYKGHTSPV-HLILPF-GPHLISVDEESNVKVWDIKAEETYL 145
T N+++ ++ H+ V H L G ++++ +++ KVW + L
Sbjct: 1717 TMKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWS-----STL 1771
Query: 146 ELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWG 205
N F I G W +C L SP ++ VG ++ + L ++ ++ E + G
Sbjct: 1772 GTQLTN--FLIPGDCWANC---LAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHG 1826
Query: 206 ---PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL-YNEP 261
+T+++F G ++ S S + VWN++ + E I+KAH + F NE
Sbjct: 1827 HTRAITSITFSPSGN-LIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNEC 1885
Query: 262 LLVTSSPDNTLKLW 275
L++ S D + K+W
Sbjct: 1886 ELISCSDDYSTKVW 1899
Score = 111 (44.1 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 36/169 (21%), Positives = 73/169 (43%)
Query: 416 TCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQI-V 474
T + + GN + + +N+Q+ H+ Y + H + + + N+ +
Sbjct: 1832 TSITFSPSGNLIASTSEDLLIKVWNVQT--HKAEYTIEK--AHNDPINCISFNPTNECEL 1887
Query: 475 ISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTC 534
IS +D + KVW + T L + N I + +A D ++ + +
Sbjct: 1888 ISCSDDYSTKVWS-RFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAVYLCSSK 1946
Query: 535 TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
++ +L GH + FSPDS+ L++ D +RVW+I + + + C +
Sbjct: 1947 KLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLK 1995
Score = 102 (41.0 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 52/219 (23%), Positives = 94/219 (42%)
Query: 108 KGHTSPVHLILPFGP----HLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS 163
K H P++ I F P LIS ++ + KVW T L +T K
Sbjct: 1868 KAHNDPINCI-SFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIK-------H 1919
Query: 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPM--MV 221
CV SP I + I ++ + + + L+ ++ G ++F T P +V
Sbjct: 1920 CVY----SPDGKYIATVSRDCSIAVY-LCSSKKLLFRLK--GHTDWVNFCTFSPDSKKLV 1972
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
SG +L VWN++ Q E K H + A F ++ ++++S D ++K+W D
Sbjct: 1973 SGGWDFNLRVWNIKT-QKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVW--DAQF 2029
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLR 320
G+ + +R H + + ++S I S++ D ++
Sbjct: 2030 GS-EITSLR--HQTRISDVVSSSDASGRIFSSSDDGIIK 2065
Score = 97 (39.2 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 33/125 (26%), Positives = 60/125 (48%)
Query: 208 TALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS 267
TA + DG M+ S + ++ + E H ++ F + L +SS
Sbjct: 1526 TACCYSRDGS-MIASAGKDSIIHIFKASNGS-ELLTLVGHSNWISCFSFSDDGKTLASSS 1583
Query: 268 PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
DNT+ +W D GN ++ + ++ HS NY +F +++ ++S A DS++ IFNT +
Sbjct: 1584 WDNTVIVW--DLIVGN-QIHQFKD-HSRAVNYCEFSPTANNLLMSCAWDSSIIIFNTSDK 1639
Query: 328 TSNKN 332
+N
Sbjct: 1640 NIFRN 1644
Score = 91 (37.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 523 DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
DF + + +I T + L GH + A F+ D +++I+AS D +++VWD
Sbjct: 1977 DFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWD 2026
Score = 90 (36.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+A DD TV + + ++ T S H G + FS D +++ T DC + +WD
Sbjct: 2120 IASSSDDGTVKLWEFNSATATT--SAHKGSINQCVFSKDGKYVATCGQDCVLNIWD 2173
Score = 78 (32.5 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 26/117 (22%), Positives = 50/117 (42%)
Query: 462 VRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCL 521
V V ++ +G + VK+ F P+ + ++ LA+
Sbjct: 2281 VESVEFSTSGDLLAAGSRTKQVKI--FSPLNDKPVTHQTSSSYVTSLSFSPNDKYLAIGT 2338
Query: 522 DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
D TV ++DI + + R L+ + +T F DS L++ S D ++ VW+ +S +
Sbjct: 2339 FDGTVELLDIASGKLRRILTTQVSSITSLKFL-DSTRLVSVSNDRSLIVWNFSTSSI 2394
Score = 64 (27.6 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 24/101 (23%), Positives = 42/101 (41%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS- 515
GH + + +IS D +VKVW Q G + S++ IS + ++S
Sbjct: 1996 GHSSSIEKAFFTKDQKYIISASFDGSVKVWD-AQFGSE-ITSLRHQTRISDVVSSSDASG 2053
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDS 556
+ DD + + + L+GH G + F+P+S
Sbjct: 2054 RIFSSSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFNPNS 2094
Score = 58 (25.5 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 23/108 (21%), Positives = 46/108 (42%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSML 517
H G + V + V + G D + +W K L+++ ++ ++ + S +L
Sbjct: 2144 HKGSINQCVFSKDGKYVATCGQDCVLNIWDAKTHIN--LKTMIFESPVTTC-SFNRSGVL 2200
Query: 518 AVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMD 565
+ L D T+ + D T++ K + G++T + P T S D
Sbjct: 2201 FIGLQDGTLEVYSKDWKTVLHKEKTN-GKITRSSAHPSLNIQSTESPD 2247
Score = 55 (24.4 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 17/71 (23%), Positives = 28/71 (39%)
Query: 263 LVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322
+ +SS D T+KLW F+ A H N F + + D L I+
Sbjct: 2120 IASSSDDGTVKLWEFNSATAT------TSAHKGSINQCVF-SKDGKYVATCGQDCVLNIW 2172
Query: 323 NTKSETSNKNL 333
+ K+ + K +
Sbjct: 2173 DAKTHINLKTM 2183
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 137 (53.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQ 512
GH+ V V + + +G D+TV++W +Q G S++L G +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-GN----SVRLFTGHRGPVLSLAFSP 478
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
LA +D + + D+ + T+ ++L GH +T FSPDS + +ASMD ++RVWD
Sbjct: 479 NGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWD 538
Query: 573 I 573
I
Sbjct: 539 I 539
Score = 128 (50.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 32/105 (30%), Positives = 53/105 (50%)
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDN--GISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
SG +D+T ++W F +T PLR I + + + H S+ LA D TV +
Sbjct: 401 SGSHDRTARLWSFDRTY--PLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 457
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+R +GH G + FSP+ ++L +A D +++WD+ S L
Sbjct: 458 GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Score = 63 (27.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 278 DKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETS 329
D+ D G ++I GH P +F +SS +LS + D ++R ++ S T+
Sbjct: 326 DEDDNAGTEMKILRGHCGPVYSTRFLADSS-GLLSCSEDMSIRYWDLGSFTN 376
Score = 45 (20.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
E +I + H V FL + L++ S D +++ W D +L +GH+ P
Sbjct: 334 EMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYW--DLGSFTNTVLY--QGHAYP 386
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/112 (30%), Positives = 57/112 (50%)
Query: 470 LNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNI 528
++ I++S G D T++ W TG R+I+ D+ ++ + +LA V +
Sbjct: 1 MSVILVSAGYDHTIRFWE-ALTGVCS-RTIQHSDSQVNRLEITNDKKLLATAGHQ-NVRL 57
Query: 529 IDIDTCTI--IRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
DI T + GH G +T F D+RW++T+S D TI+VWD+ S +
Sbjct: 58 YDIRTTNPNPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKVWDVRSPSI 109
Score = 108 (43.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 517 LAVCLDDFTVNIIDIDT-CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
LA C D T + ID + L GH + D FS DS +L+TAS D +R+WD+ +
Sbjct: 222 LATCSADHTARVWSIDDDFKLETTLDGHQRWVWDCAFSADSAYLVTASSDHYVRLWDLST 281
Query: 576 SQLI 579
+++
Sbjct: 282 REIV 285
Score = 85 (35.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304
+ HR VT F + +VTSS D T+K+W D + H+AP N + +
Sbjct: 72 EGHRGNVTSVSFQQDNRWMVTSSEDGTIKVW-----DVRSPSIPRNYKHNAPVNEVVIHP 126
Query: 305 NSSDNILSAAGDSTLRIFN 323
N + ++S D +RI++
Sbjct: 127 NQGE-LISCDRDGNIRIWD 144
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 116 (45.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531
+I+ISG +D TV +W+ T R I+ + A D ++ + D
Sbjct: 364 EILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDG 423
Query: 532 DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ + GH+G + +S DSR+L++ S D T+++WDI + ++
Sbjct: 424 QSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKM 470
Score = 105 (42.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 522 DDFTVNIIDID-TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLID 580
DDFTV + + T T I +L+GH + FSPD R+ +AS D +I++WD S + +
Sbjct: 371 DDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLG 430
Query: 581 CFQ 583
F+
Sbjct: 431 NFR 433
Score = 93 (37.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF-FRTHQESSMLAVCLDDFTVNIIDIDTC 534
S D+++K+W Q+GK L + + G + +S L D T+ I DI T
Sbjct: 411 SASFDKSIKLWD-GQSGKF-LGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTK 468
Query: 535 TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ ++L GH ++ D+SPD + + S D +R+W +
Sbjct: 469 KMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIWTV 507
Score = 83 (34.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 50/226 (22%), Positives = 94/226 (41%)
Query: 109 GHTSPVH--LILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVN 166
GHT V P G +SV ++ V++WDI L T ++ W+
Sbjct: 138 GHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLK--GHTNWVLQVAWSPDSK 195
Query: 167 VLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQ--TWGPVTALSFRTDGPPM-MVSG 223
+ + + I + L + L + +FI +W P F + + + S
Sbjct: 196 KIATAGMEGDIRIWCPQTGKQLGSTLKGHT--KFITGLSWEP-----FHLNPKCVRLASS 248
Query: 224 SNTGHLTVWNLEDRQVENQIK-KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG 282
S + +W+ E +N + H VT + E L+ + S D T++ +F+ DG
Sbjct: 249 SKDSTIRIWDTES--CKNLMSLSGHTMSVTCLKW-GGEGLIYSGSQDRTVR--VFNTTDG 303
Query: 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFNTKSE 327
RL+R+ +GH+ +++ ++D +L D T + ++T E
Sbjct: 304 --RLVRVLDGHA---HWVNTLALNTDYVLRTGSYDHTGKEYDTLEE 344
>CGD|CAL0002491 [details] [associations]
symbol:DIP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0034388 "Pwp2p-containing
subcomplex of 90S preribosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030515 "snoRNA binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0002491 GO:GO:0071216 GO:GO:0036180 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035690 GO:GO:0009267
EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0036170 GO:GO:0032040
InterPro:IPR007148 Pfam:PF04003 KO:K14556 RefSeq:XP_717569.1
RefSeq:XP_717643.1 ProteinModelPortal:Q5A756 STRING:Q5A756
GeneID:3640762 GeneID:3640827 KEGG:cal:CaO19.12572
KEGG:cal:CaO19.5106 Uniprot:Q5A756
Length = 981
Score = 123 (48.4 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 474 VISGGNDQTVKVWHFK---------QTGKPPLR-----SIKLDNGISFFRTHQESSMLAV 519
+++GGND+ VK W+FK T L+ +++L+ + R ++ LA+
Sbjct: 532 LVTGGNDKCVKFWNFKVEQDIIPGTNTTVSHLKFVHTQTLELNEDVLCVRISPDAKYLAI 591
Query: 520 CLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
L + V ++ +DT + L GH + D S DS+ +IT+S D I++W +
Sbjct: 592 SLLNNNVQVVFLDTLKLFLTLYGHRLPVLSIDISHDSKLIITSSADKNIKIWGL 645
Score = 84 (34.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 42/145 (28%), Positives = 65/145 (44%)
Query: 121 GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV------- 173
G L S EE + +WDIK E +S D T G N+ V PSPV
Sbjct: 38 GRALTSGLEE--ILIWDIKTGEIMNRMS-DGLT---PGSS-NASTTV-PPSPVSYLTYHQ 89
Query: 174 -VDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVW 232
+II G ++ I + +I ++ ++ F +T L F +G +VSGS+ + +W
Sbjct: 90 ETNIIAAGYTDGSIKIWDISSNSVIINFEGHNSSITQLKFDKNGT-RLVSGSSDSSIIMW 148
Query: 233 NLEDRQVENQIKKAHRKVVTGAHFL 257
+L +V K H+ +TG L
Sbjct: 149 DLIG-EVGMFKLKGHKGPITGLELL 172
Score = 81 (33.6 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 39/167 (23%), Positives = 68/167 (40%)
Query: 130 ESNVKVWDIKAEETYLELSFDNDTFKIM--GKRWNSCVNVLEPSPVV--DIIG-VGLSNK 184
+ ++K+WDI + + N + + K V+ S ++ D+IG VG+
Sbjct: 100 DGSIKIWDISSNSVIINFEGHNSSITQLKFDKNGTRLVSGSSDSSIIMWDLIGEVGMFKL 159
Query: 185 KIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK 244
K I E L E T + D +VS S G + +W L+ +Q +
Sbjct: 160 KGHKGPITGLELLSEQQNTQQDGDNVDDVDDMDDYLVSVSKDGLIKLWELKSQQCI-ETH 218
Query: 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE 291
AH + +L+TS + +K+W D + +G L+I E
Sbjct: 219 LAHSNECWAMGINPTKDMLITSGNKDQVKVWSLDLSLEDG--LKIGE 263
Score = 76 (31.8 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 25/115 (21%), Positives = 52/115 (45%)
Query: 139 KAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLM 198
KA+ L S T ++G R++ + ++ SP + + SN ++ + N + +
Sbjct: 398 KAQSADL-YSVKQHTIDLLGHRFD--IRAMDISPQDNKLLATASNGELKIWNTRSYNVIR 454
Query: 199 EFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTG 253
F+ G F G ++V G G L +++L + ++++KAH + G
Sbjct: 455 TFVLEGGYALCCKFLPGGT-LIVVGFKNGDLELYDLATSSLVDRVEKAHSAITVG 508
Score = 68 (29.0 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 42/203 (20%), Positives = 86/203 (42%)
Query: 103 IVGTYKGHTSPVHLILPF---GPHLISVDEESNVKVWDIKAEETYLELSFDNDTF---KI 156
++ ++GH S + L F G L+S +S++ +WD+ E +L ++
Sbjct: 113 VIINFEGHNSSITQ-LKFDKNGTRLVSGSSDSSIIMWDLIGEVGMFKLKGHKGPITGLEL 171
Query: 157 MGKRWNSCV---NVLEPSPVVDIIGVGLSNKKII-LHNILTDESLMEFIQTWGPVTALSF 212
+ ++ N+ NV + + D + V +S +I L + + + + + A+
Sbjct: 172 LSEQQNTQQDGDNVDDVDDMDDYL-VSVSKDGLIKLWELKSQQCIETHLAHSNECWAMGI 230
Query: 213 RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHR-KVVTGAHFLYNE----PLLVTSS 267
M+++ N + VW+L D +E+ +K R + NE L +SS
Sbjct: 231 NPT-KDMLITSGNKDQVKVWSL-DLSLEDGLKIGERGSFEKTSKSRSNEIAFKSLKSSSS 288
Query: 268 PDNTLKLWIFDKADGNGRLLRIR 290
+ ++L+ AD + RIR
Sbjct: 289 SASLIQLFSIQNADRTMEIFRIR 311
Score = 42 (19.8 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 308 DN-ILSAAGDSTLRIFNTKS 326
DN +L+ A + L+I+NT+S
Sbjct: 430 DNKLLATASNGELKIWNTRS 449
>UNIPROTKB|Q5A756 [details] [associations]
symbol:DIP2 "Putative uncharacterized protein DIP2"
species:237561 "Candida albicans SC5314" [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0032040 "small-subunit processome"
evidence=IDA] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0036170 "filamentous growth of a population of unicellular
organisms in response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0002491 GO:GO:0071216
GO:GO:0036180 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035690
GO:GO:0009267 EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0036170
GO:GO:0032040 InterPro:IPR007148 Pfam:PF04003 KO:K14556
RefSeq:XP_717569.1 RefSeq:XP_717643.1 ProteinModelPortal:Q5A756
STRING:Q5A756 GeneID:3640762 GeneID:3640827 KEGG:cal:CaO19.12572
KEGG:cal:CaO19.5106 Uniprot:Q5A756
Length = 981
Score = 123 (48.4 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 474 VISGGNDQTVKVWHFK---------QTGKPPLR-----SIKLDNGISFFRTHQESSMLAV 519
+++GGND+ VK W+FK T L+ +++L+ + R ++ LA+
Sbjct: 532 LVTGGNDKCVKFWNFKVEQDIIPGTNTTVSHLKFVHTQTLELNEDVLCVRISPDAKYLAI 591
Query: 520 CLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
L + V ++ +DT + L GH + D S DS+ +IT+S D I++W +
Sbjct: 592 SLLNNNVQVVFLDTLKLFLTLYGHRLPVLSIDISHDSKLIITSSADKNIKIWGL 645
Score = 84 (34.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 42/145 (28%), Positives = 65/145 (44%)
Query: 121 GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV------- 173
G L S EE + +WDIK E +S D T G N+ V PSPV
Sbjct: 38 GRALTSGLEE--ILIWDIKTGEIMNRMS-DGLT---PGSS-NASTTV-PPSPVSYLTYHQ 89
Query: 174 -VDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVW 232
+II G ++ I + +I ++ ++ F +T L F +G +VSGS+ + +W
Sbjct: 90 ETNIIAAGYTDGSIKIWDISSNSVIINFEGHNSSITQLKFDKNGT-RLVSGSSDSSIIMW 148
Query: 233 NLEDRQVENQIKKAHRKVVTGAHFL 257
+L +V K H+ +TG L
Sbjct: 149 DLIG-EVGMFKLKGHKGPITGLELL 172
Score = 81 (33.6 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 39/167 (23%), Positives = 68/167 (40%)
Query: 130 ESNVKVWDIKAEETYLELSFDNDTFKIM--GKRWNSCVNVLEPSPVV--DIIG-VGLSNK 184
+ ++K+WDI + + N + + K V+ S ++ D+IG VG+
Sbjct: 100 DGSIKIWDISSNSVIINFEGHNSSITQLKFDKNGTRLVSGSSDSSIIMWDLIGEVGMFKL 159
Query: 185 KIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK 244
K I E L E T + D +VS S G + +W L+ +Q +
Sbjct: 160 KGHKGPITGLELLSEQQNTQQDGDNVDDVDDMDDYLVSVSKDGLIKLWELKSQQCI-ETH 218
Query: 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE 291
AH + +L+TS + +K+W D + +G L+I E
Sbjct: 219 LAHSNECWAMGINPTKDMLITSGNKDQVKVWSLDLSLEDG--LKIGE 263
Score = 76 (31.8 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 25/115 (21%), Positives = 52/115 (45%)
Query: 139 KAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLM 198
KA+ L S T ++G R++ + ++ SP + + SN ++ + N + +
Sbjct: 398 KAQSADL-YSVKQHTIDLLGHRFD--IRAMDISPQDNKLLATASNGELKIWNTRSYNVIR 454
Query: 199 EFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTG 253
F+ G F G ++V G G L +++L + ++++KAH + G
Sbjct: 455 TFVLEGGYALCCKFLPGGT-LIVVGFKNGDLELYDLATSSLVDRVEKAHSAITVG 508
Score = 68 (29.0 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 42/203 (20%), Positives = 86/203 (42%)
Query: 103 IVGTYKGHTSPVHLILPF---GPHLISVDEESNVKVWDIKAEETYLELSFDNDTF---KI 156
++ ++GH S + L F G L+S +S++ +WD+ E +L ++
Sbjct: 113 VIINFEGHNSSITQ-LKFDKNGTRLVSGSSDSSIIMWDLIGEVGMFKLKGHKGPITGLEL 171
Query: 157 MGKRWNSCV---NVLEPSPVVDIIGVGLSNKKII-LHNILTDESLMEFIQTWGPVTALSF 212
+ ++ N+ NV + + D + V +S +I L + + + + + A+
Sbjct: 172 LSEQQNTQQDGDNVDDVDDMDDYL-VSVSKDGLIKLWELKSQQCIETHLAHSNECWAMGI 230
Query: 213 RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHR-KVVTGAHFLYNE----PLLVTSS 267
M+++ N + VW+L D +E+ +K R + NE L +SS
Sbjct: 231 NPT-KDMLITSGNKDQVKVWSL-DLSLEDGLKIGERGSFEKTSKSRSNEIAFKSLKSSSS 288
Query: 268 PDNTLKLWIFDKADGNGRLLRIR 290
+ ++L+ AD + RIR
Sbjct: 289 SASLIQLFSIQNADRTMEIFRIR 311
Score = 42 (19.8 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 308 DN-ILSAAGDSTLRIFNTKS 326
DN +L+ A + L+I+NT+S
Sbjct: 430 DNKLLATASNGELKIWNTRS 449
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 108 (43.1 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 523 DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
D VNI D ++I+ LSGH G + AD S +++W+ + D T+++W I
Sbjct: 470 DKNVNIFSADDWSLIKTLSGHSGNVLSADISNNAQWIASCGHDRTVKLWGI 520
Score = 87 (35.7 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 31/127 (24%), Positives = 61/127 (48%)
Query: 203 TWGPVTAL--SFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNE 260
+W P L S ++ VSG G++ +W+L+ Q ++ H V F +
Sbjct: 246 SWFPGATLPESNVSESAVNFVSGGGEGNVCLWSLDKDQPLATLE-GHSGRVCRTEFHPSG 304
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTL 319
+ ++S D T +LW + L+++EGHS + F N+ ++L++ G DS
Sbjct: 305 KYIASASYDTTWRLWDVETTAE----LQLQEGHSREVYTVAF--NNDGSLLASGGLDSIG 358
Query: 320 RIFNTKS 326
R+++ ++
Sbjct: 359 RVWDLRT 365
Score = 66 (28.3 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 38/153 (24%), Positives = 71/153 (46%)
Query: 104 VGTYKGHTSPVHL--ILPFGPHLISVDEESNVKVWDIKAEETYLELSF-DNDTFKIMGKR 160
+ T +GH+ V P G ++ S ++ ++WD+ ET EL + + ++
Sbjct: 285 LATLEGHSGRVCRTEFHPSGKYIASASYDTTWRLWDV---ETTAELQLQEGHSREVYTVA 341
Query: 161 WNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMM 220
+N+ ++L S +D IG + ++ T ++M + L + DG ++
Sbjct: 342 FNNDGSLLA-SGGLDSIGR--------VWDLRTGRTVMILEGHIREIFGLDWGVDGYRVL 392
Query: 221 VSGSNTGHLTVWNLEDRQVENQIK-KAHRKVVT 252
SGS G + W+L RQV+N AH+ VV+
Sbjct: 393 -SGSGDGWVKCWDL--RQVKNTGGIGAHKSVVS 422
Score = 45 (20.9 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQ 490
GH+ + G+ V+SG D VK W +Q
Sbjct: 374 GHIREIFGLDWGVDGYRVLSGSGDGWVKCWDLRQ 407
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 113 (44.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 64/282 (22%), Positives = 113/282 (40%)
Query: 64 KLLSVSPQHEDDITC--LSSDFFHIYT-SANNIIYAWRRGI-DIVGTYKGHTSPVHL--I 117
KLL + HED++ C S+D I T S + + W ++V TY H+ V+
Sbjct: 649 KLLEIKA-HEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHF 707
Query: 118 LPFGPHLISVDEESN--VKVWDIKAEETYLEL-----SFDNDTFKIMGKRWNSCV--NVL 168
HL+ S+ +K+WD+ +E + S ++ F K SC L
Sbjct: 708 TNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTL 767
Query: 169 EPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGH 228
+ N K N+ + ME I V S+ DG +MV+ N
Sbjct: 768 KLWDATSANERKSINVKQFFLNLEDPQEDMEVI-----VKCCSWSADGARIMVAAKNK-- 820
Query: 229 LTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLR 288
+ ++++ + +I H + F L V + ++LW D ++
Sbjct: 821 IFLFDIHTSGLLGEIHTGHHSTIQYCDFSPQNHLAVVALSQYCVELW---NTDSRSKVAD 877
Query: 289 IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
R GH + + + F + S + L+++ D T+R++ TK N
Sbjct: 878 CR-GHLSWVHGVMFSPDGS-SFLTSSDDQTIRLWETKKVCKN 917
Score = 102 (41.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 37/157 (23%), Positives = 70/157 (44%)
Query: 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN 241
++K + + T E L+E V +F TD + + S + +WN ++ +
Sbjct: 635 ADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDR-FIATCSVDKKVKIWNSMTGELVH 693
Query: 242 QIKKAHRKVVTGAHFLYNEP--LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNY 299
+ H + V HF + LL T S D LKLW ++ + + GH+ N+
Sbjct: 694 TYDE-HSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMF----GHTNSVNH 748
Query: 300 IQFYGNSSDNIL-SAAGDSTLRIFNTKSETSNKNLGI 335
+F + D +L S + D TL++++ S K++ +
Sbjct: 749 CRF--SPDDKLLASCSADGTLKLWDATSANERKSINV 783
Score = 95 (38.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 31/111 (27%), Positives = 50/111 (45%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG--ISFFRTHQESSMLAVCLDDFTVNI 528
N ++S D TVKVW+ TG + G +S +H + + D T I
Sbjct: 1055 NSRLLSWSFDGTVKVWNII-TGNKE-KDFVCHQGTVLSCDISHDATKFSSTSADK-TAKI 1111
Query: 529 IDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
D + +L GH G + + FS DS L T + IR+W++ + +L+
Sbjct: 1112 WSFDLLLPLHELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELL 1162
Score = 85 (35.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ + V L + V + + D+ + + GH+ + FSPD +T+S D TIR+W+
Sbjct: 851 QNHLAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWE 910
Score = 81 (33.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 35/126 (27%), Positives = 55/126 (43%)
Query: 212 FRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271
F DG + G++ L V+ E + +IK AH V F ++ + T S D
Sbjct: 623 FSEDGQRIASCGADKT-LQVFKAETGEKLLEIK-AHEDEVLCCAFSTDDRFIATCSVDKK 680
Query: 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDST--LRIFN-TKSET 328
+K+W G L+ + HS N F NSS ++L A G S L++++ + E
Sbjct: 681 VKIW----NSMTGELVHTYDEHSEQVNCCHFT-NSSHHLLLATGSSDCFLKLWDLNQKEC 735
Query: 329 SNKNLG 334
N G
Sbjct: 736 RNTMFG 741
Score = 78 (32.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 31/112 (27%), Positives = 53/112 (47%)
Query: 480 DQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIR 538
D+T K+W F PL ++ NG + +S++LA D+ + I ++ ++
Sbjct: 1106 DKTAKIWSFDLL--LPLHELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLH 1163
Query: 539 ---KLS--G---HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
LS G H G +TD FSPD + LI+A I+ W++ + + F
Sbjct: 1164 LCAPLSEEGAATHGGWVTDLCFSPDGKMLISAGG--YIKWWNVVTGESSQTF 1213
Score = 78 (32.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 31/161 (19%), Positives = 69/161 (42%)
Query: 412 QSKPTCVYITHCGNFVLIGYSSGHVDRFN-IQSGAHRGSYGHDNQPGHVGGVRGVVSDNL 470
+++ +C ++ ++ G +G ++ + + + + H H+ +D
Sbjct: 961 EAQVSCCCLSPHLQYIAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQ----FTADE- 1015
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
+ +IS +D ++VW+++ LR + + FR + S +L+ D TV + +
Sbjct: 1016 -KTLISSSDDAEIQVWNWQLDKCIFLRGHQ--ETVKDFRLLKNSRLLSWSFDG-TVKVWN 1071
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
I T + H G + D S D+ + S D T ++W
Sbjct: 1072 IITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIW 1112
Score = 72 (30.4 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH+ V GV+ ++ +DQT+++W K+ K +K + + F QE+ +
Sbjct: 880 GHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAVMLKQEVDVVF----QENEV 935
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFS 553
+ + +D I +I +G + LT+A S
Sbjct: 936 MVLAVDH-------IRRLQLINGRTGQIDYLTEAQVS 965
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 104 (41.7 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 37/157 (23%), Positives = 69/157 (43%)
Query: 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN 241
++K + + T E L+E V +F D + + S + +WN ++
Sbjct: 371 ADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDR-FIATCSVDKKVKIWNSVTGELVQ 429
Query: 242 QIKKAHRKVVTGAHFLYNEP--LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNY 299
+ H + V HF N LL T S D LKLW ++ + + GH+ ++
Sbjct: 430 SYDE-HSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMF----GHTNSVSH 484
Query: 300 IQFYGNSSDNIL-SAAGDSTLRIFNTKSETSNKNLGI 335
+F + D +L S + D TL++++ KS K++ +
Sbjct: 485 CRF--SPDDKLLASCSADGTLKLWDVKSANERKSINV 519
Score = 98 (39.6 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 29/114 (25%), Positives = 52/114 (45%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSML 517
H VR + + VIS +D ++VW+++ L++ + + FR + S +L
Sbjct: 747 HKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETVSLQAHQ--ETVKDFRLLKNSRLL 804
Query: 518 AVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ D TV + +I T I + H + D SPD+ + S D T ++W
Sbjct: 805 SWSFDG-TVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 857
Score = 96 (38.9 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
N ++S D TVKVW+ TG+ + + + +++ + D T I
Sbjct: 800 NSRLLSWSFDGTVKVWNII-TGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWS 858
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
D + + +L GH G + + FS DS L T + IR+W++ + +L+
Sbjct: 859 FDLLSPLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELL 907
Score = 83 (34.3 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 480 DQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNIIDID------ 532
D+T K+W F PL ++ G + +S++LA D+ + I ++
Sbjct: 851 DKTAKIWSFDLLS--PLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLH 908
Query: 533 TCTIIRKLSG---HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
+C + G H G +TD FSPD + L++A ++ W++ S + I F
Sbjct: 909 SCAPVLVEGGAATHGGWVTDLRFSPDGKMLVSAGG--YLKWWNVDSGKSIQTF 959
Score = 80 (33.2 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 34/126 (26%), Positives = 57/126 (45%)
Query: 212 FRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271
F DG + G++ L V+ E + +IK AH V F ++ + T S D
Sbjct: 359 FSEDGQRIASCGADKT-LQVFKAETGEKLLEIK-AHEDEVLCCAFSADDRFIATCSVDKK 416
Query: 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDST--LRIFN-TKSET 328
+K+W G L++ + HS N F N+S+++L A G S L++++ + E
Sbjct: 417 VKIW----NSVTGELVQSYDEHSEQVNCCHFT-NNSNHLLLATGSSDYFLKLWDLNQKEC 471
Query: 329 SNKNLG 334
N G
Sbjct: 472 RNTMFG 477
Score = 71 (30.1 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
N RL + R H +IQF + N++S++ DS ++++N +SE
Sbjct: 737 NNRLFQSRTRHKNTVRHIQFTTDGK-NVISSSDDSAIQVWNWQSE 780
Score = 60 (26.2 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 24/106 (22%), Positives = 45/106 (42%)
Query: 44 ETLFVTC-VGKAFHVYGCNHFKLLSVSPQHEDDITCL----SSDFFHIYT-SANNIIYAW 97
+ TC V K ++ +L+ +H + + C +S+ + T S++ + W
Sbjct: 405 DRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLW 464
Query: 98 RRGI-DIVGTYKGHTSPV-HL-ILPFGPHLISVDEESNVKVWDIKA 140
+ T GHT+ V H P L S + +K+WD+K+
Sbjct: 465 DLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKS 510
Score = 48 (22.0 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 62 HFKLLSVSPQHEDDITCLSSDFFHIYTSAN--NIIYAWRRGIDIVGTYKGHTSPVHLILP 119
H +L ++SP ED + + +H+ SAN + A +D + P HLI
Sbjct: 203 HHRLHTLSPDQEDCMYWYNFLAYHM-ASANMHKELCALMFSLDWIKAKTELVGPAHLIHE 261
Query: 120 FGPHLISVDEE 130
F + +DE+
Sbjct: 262 FVEYRHILDEK 272
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 38/121 (31%), Positives = 63/121 (52%)
Query: 454 NQPGHVGGVRGV-VSDNLNQIVISGGNDQTVKVWHFKQTGKP-PLRSIKLDNGISFFRTH 511
N GH VR + + + + I++S D+T+++W + GK + S L +
Sbjct: 148 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQ-WVYCCSIS 206
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ SML + +V + + + T+IRKL GH + DFSPDS L+TAS D ++ +W
Sbjct: 207 PDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMW 266
Query: 572 D 572
D
Sbjct: 267 D 267
>TAIR|locus:2092722 [details] [associations]
symbol:LST8-1 "AT3G18140" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005768 "endosome"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0048571
"long-day photoperiodism" evidence=IMP] [GO:1900088 "regulation of
inositol biosynthetic process" evidence=IMP] [GO:1900091
"regulation of raffinose biosynthetic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002686 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005768 InterPro:IPR020472
PRINTS:PR00320 EMBL:AB020749 HSSP:P16649 GO:GO:0048571 OMA:NNKGNCY
EMBL:AY087463 EMBL:BT002312 IPI:IPI00542303 RefSeq:NP_188442.1
UniGene:At.6055 ProteinModelPortal:Q9LV27 SMR:Q9LV27 IntAct:Q9LV27
STRING:Q9LV27 PRIDE:Q9LV27 EnsemblPlants:AT3G18140.1 GeneID:821339
KEGG:ath:AT3G18140 TAIR:At3g18140 InParanoid:Q9LV27
PhylomeDB:Q9LV27 ProtClustDB:CLSN2683726 Genevestigator:Q9LV27
GO:GO:1900088 GO:GO:1900091 Uniprot:Q9LV27
Length = 305
Score = 136 (52.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 37/117 (31%), Positives = 57/117 (48%)
Query: 473 IVISGGNDQTVKVWHF---KQTGKP--PLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTV 526
+V++ N T VW KQT PL ++ NG I + LA D TV
Sbjct: 176 MVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTV 235
Query: 527 NIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
I ++D + + L+GH + D FS D +L+TAS D T R+W +P+ + + +Q
Sbjct: 236 KIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQ 292
Score = 53 (23.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRI 321
+L T+S D+T++ W +A+ GR R + + N ++ + L+AA + +R+
Sbjct: 7 ILATASYDHTIRFW---EAE-TGRCYRTIQYPDSHVNRLEI--TPDKHYLAAACNPHIRL 60
Query: 322 FNTKSET 328
F+ S +
Sbjct: 61 FDVNSNS 67
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 103 (41.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 25/101 (24%), Positives = 48/101 (47%)
Query: 46 LFVTCVGKAFHVYG--CNHFKLLSVSPQHEDDITCLSSDFFHIYT-SANNIIYAWR-RGI 101
LF C + VY + + + HE + + + ++++ S+++ I W + +
Sbjct: 473 LFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKKL 532
Query: 102 DIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEE 142
+ T +GH PVH +L +L S + +KVWD+K E
Sbjct: 533 RCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLE 573
Score = 100 (40.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 28/103 (27%), Positives = 52/103 (50%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
+ SGS + VWNL+ + ++ H + V H + + LL T+S DNT+K+W +
Sbjct: 635 LYSGSYDKTIRVWNLKSLECSATLR-GHDRWVE--HMVICDKLLFTASDDNTIKIWDLET 691
Query: 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322
N L EGH+A + + + ++S + D ++R++
Sbjct: 692 LRCNTTL----EGHNATVQCLAVWEDKKC-VISCSHDQSIRVW 729
Score = 93 (37.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 42/168 (25%), Positives = 70/168 (41%)
Query: 407 CKQAKQSKPTCVYITHC--GNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRG 464
CK +S V T C G ++ G + + +++++ R +Y GH V
Sbjct: 574 CKYTLESHARAVK-TLCISGQYLFSGSNDKTIKVWDLKT--FRCNY---TLKGHTKWVTT 627
Query: 465 VVSDNLNQIVISGGNDQTVKVWHFKQTG-KPPLRSIKLDNGISFFRTHQESSMLAVCLDD 523
+ N + SG D+T++VW+ K LR D + + +L DD
Sbjct: 628 ICILGTN--LYSGSYDKTIRVWNLKSLECSATLRGH--DRWVEHMVICDK--LLFTASDD 681
Query: 524 FTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
T+ I D++T L GH + D + +I+ S D +IRVW
Sbjct: 682 NTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 88 (36.0 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 34/147 (23%), Positives = 70/147 (47%)
Query: 181 LSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE 240
++NKK N+ T + L+E I+ + + L D ++ +G + + V++ + + +E
Sbjct: 438 INNKKKESINLETIK-LIETIKGYHVTSHLCI-CDN--LLFTGCSDNSIRVYDYKSQNME 493
Query: 241 N-QIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNY 299
Q K H V YN+ L + S D+++K+W K R + EGH P +
Sbjct: 494 CVQTLKGHEGPVES--ICYNDQYLFSGSSDHSIKVWDLKKL----RCIFTLEGHDKPVHT 547
Query: 300 IQFYGNSSDNILSAAGDSTLRIFNTKS 326
+ + + S + D T+++++ K+
Sbjct: 548 VLL---NDKYLFSGSSDKTIKVWDLKT 571
Score = 78 (32.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 28/114 (24%), Positives = 52/114 (45%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
+ SGSN + VW+L+ + N K H K VT L L + S D T+++W
Sbjct: 595 LFSGSNDKTIKVWDLKTFRC-NYTLKGHTKWVTTICILGTN--LYSGSYDKTIRVWNLKS 651
Query: 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
+ + L GH +++ + +A+ D+T++I++ ++ N L
Sbjct: 652 LECSATL----RGHD---RWVEHMVICDKLLFTASDDNTIKIWDLETLRCNTTL 698
Score = 75 (31.5 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 30/104 (28%), Positives = 46/104 (44%)
Query: 472 QIVISGGNDQTVKVWHFKQTG-KPPLRS-IKLDNGISFFRTHQESSMLAVCLDDFTVNII 529
Q + SG ND+T+KVW K L+ K I T+ S D T+ +
Sbjct: 593 QYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSY-----DKTIRVW 647
Query: 530 DIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
++ + L GH + + D + L TAS D TI++WD+
Sbjct: 648 NLKSLECSATLRGH-DRWVEHMVICD-KLLFTASDDNTIKIWDL 689
Score = 72 (30.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 72 HEDDI-TCLSSDFFHIYTSANNIIYAWR-RGIDIVGTYKGHTSPVHLILPFGPHLISVDE 129
H+ + T L +D + S++ I W + ++ T + H V + G +L S
Sbjct: 541 HDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSN 600
Query: 130 ESNVKVWDIK 139
+ +KVWD+K
Sbjct: 601 DKTIKVWDLK 610
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 111 (44.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 38/160 (23%), Positives = 73/160 (45%)
Query: 174 VDIIGVGLSNKKIILHNILT---DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLT 230
+ ++ G ++IIL T + +M+ I G + + F + G + SG + +
Sbjct: 30 LQVVSSG-GGREIILGTERTSKLEHPIMQLIGHKGEIYSCKFNSYGTAL-ASGGSDKEIF 87
Query: 231 VWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLL-RI 289
+WN+ + + K H+ + H+ + + T+ D ++ +W +K G L+ RI
Sbjct: 88 LWNVYGECINYSVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWDSNK----GELIKRI 143
Query: 290 REGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETS 329
RE HS N + S + D + RIF+T+S+ S
Sbjct: 144 RE-HSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGS 182
Score = 83 (34.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGI-SFFRTHQESSMLAV------C-LDDFT 525
++S D + K+W + PP R+IK NG + F + S ++ C D
Sbjct: 247 LLSNSMDNSCKIWDIRPYA-PPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQ 305
Query: 526 VNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
V I D +T + L GH G + + F P+ + + S D TI + +I
Sbjct: 306 VYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIYLGEI 353
Score = 83 (34.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 24/114 (21%), Positives = 52/114 (45%)
Query: 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
NSC P+V G ++ + + + S F + PVT++ F +D ++
Sbjct: 151 NSCCPARRGPPLV---ASGSDDRSARIFDTRSKGSTHLFQHKY-PVTSVCF-SDASDQLI 205
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
+G + VW++ +++ +H+ +T + L+++S DN+ K+W
Sbjct: 206 TGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIW 259
Score = 82 (33.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 23/103 (22%), Positives = 49/103 (47%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESSMLAVCLDDFTVNIIDI 531
+V SG +D++ +++ + G L K + F + ++ +D+ + + DI
Sbjct: 162 LVASGSDDRSARIFDTRSKGSTHLFQHKYPVTSVCF--SDASDQLITGGIDN-VIRVWDI 218
Query: 532 -DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ + L+ H +T S D +L++ SMD + ++WDI
Sbjct: 219 RNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDI 261
Score = 78 (32.5 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 33/150 (22%), Positives = 71/150 (47%)
Query: 180 GLSNKKIILHNILTDESLMEFIQTW-GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238
G S+K+I L N+ + ++ G + L + TD + + ++ + VW+ +
Sbjct: 80 GGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTDSNEIYTACTDKS-IGVWDSNKGE 138
Query: 239 VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD-KADGNGRLLRIREGHSAPP 297
+ +I++ H VV P LV S D+ IFD ++ G+ L + H P
Sbjct: 139 LIKRIRE-HSGVVNSCCPARRGPPLVASGSDDR-SARIFDTRSKGSTHLFQ----HKYPV 192
Query: 298 NYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
+ F ++SD +++ D+ +R+++ +++
Sbjct: 193 TSVCF-SDASDQLITGGIDNVIRVWDIRNQ 221
Score = 64 (27.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 29/123 (23%), Positives = 49/123 (39%)
Query: 467 SDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTV 526
SD +Q+ I+GG D ++VW + P + I+ ++ + L D +
Sbjct: 198 SDASDQL-ITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSC 256
Query: 527 NIIDIDTCTI----IRKLSGHMGQ----LTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
I DI I+ +G L + +S D R + S D + +WD + QL
Sbjct: 257 KIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQL 316
Query: 579 IDC 581
C
Sbjct: 317 QYC 319
>FB|FBgn0025725 [details] [associations]
symbol:alphaCop "alpha-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
Uniprot:O77285
Length = 1234
Score = 156 (60.0 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 42/120 (35%), Positives = 61/120 (50%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRT---HQE 513
H G VRGV + +SGG+D +KVW++KQ R I L + + RT H E
Sbjct: 50 HDGPVRGVAFHQQMPLFVSGGDDYKIKVWNYKQR-----RCIFTLLAHLDYVRTVAFHHE 104
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ DD T+ I + + I L+GH + A F P +++AS+D T+RVWDI
Sbjct: 105 YPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTEDQIVSASLDQTVRVWDI 164
Score = 122 (48.0 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 37/137 (27%), Positives = 69/137 (50%)
Query: 197 LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF 256
L +F + GPV ++F P+ VSG + + VWN + R+ + AH V F
Sbjct: 44 LEKFDEHDGPVRGVAFHQQ-MPLFVSGGDDYKIKVWNYKQRRCIFTLL-AHLDYVRTVAF 101
Query: 257 LYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD 316
+ P ++++S D T+++W + + + + GH+ QF+ + D I+SA+ D
Sbjct: 102 HHEYPWILSASDDQTIRIWNWQSRN----CICVLTGHNHYVMCAQFHP-TEDQIVSASLD 156
Query: 317 STLRIFNTKSETSNKNL 333
T+R+++ S KN+
Sbjct: 157 QTVRVWDI-SGLRKKNV 172
Score = 65 (27.9 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 530 DIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
++DTC GH ++ F P +++ D +IRVWD+ Q + F+
Sbjct: 244 EVDTCR------GHYNNVSSVLFHPRQDLILSNGEDRSIRVWDMTKRQCLFTFR 291
Score = 63 (27.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN 503
D GH V V+ +++S G D++++VW T + L + + DN
Sbjct: 246 DTCRGHYNNVSSVLFHPRQDLILSNGEDRSIRVWDM--TKRQCLFTFRRDN 294
Score = 48 (22.0 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 473 IVISGGNDQTVKVWHFKQ 490
+++SG +D+ VK+W +
Sbjct: 222 LIVSGADDRLVKLWRMNE 239
>POMBASE|SPAC9G1.05 [details] [associations]
symbol:SPAC9G1.05 "actin cortical patch component Aip1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0030042 "actin filament
depolymerization" evidence=ISO] [GO:0030479 "actin cortical patch"
evidence=ISO] [GO:0032153 "cell division site" evidence=IDA]
[GO:0043234 "protein complex" evidence=NAS] [GO:0051286 "cell tip"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC9G1.05 GO:GO:0005829 GO:GO:0005634
GO:GO:0043234 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0032153 GO:GO:0051286 eggNOG:COG2319
GO:GO:0030479 GO:GO:0030042 HOGENOM:HOG000162559 OrthoDB:EOG4P5PJ9
OMA:LKDQKKC PIR:T39228 RefSeq:NP_593560.1 ProteinModelPortal:O14301
IntAct:O14301 STRING:O14301 PRIDE:O14301 EnsemblFungi:SPAC9G1.05.1
GeneID:2542795 KEGG:spo:SPAC9G1.05 NextBio:20803838 Uniprot:O14301
Length = 595
Score = 109 (43.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 53/216 (24%), Positives = 90/216 (41%)
Query: 107 YKGHTSP--VHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSC 164
Y HT+P V P G ++ S D + NV++WD E+ L+ N I G+
Sbjct: 54 YNEHTAPTTVARFSPSGYYVASGDNQGNVRIWDCAGEDKILK----NQVTAISGR----- 104
Query: 165 VNVLE-PSPVVDIIGVGLSNKKIILHNILTDE--SLMEFIQTWGPVTALSFRTDGPPMMV 221
+ L+ II VG K+ H D S+ E V A+S R P
Sbjct: 105 ITDLDWDGDSQRIIAVG-EGKERYGHAFTADSGNSVGEIFGHSSVVNAVSLRKSRPFRAA 163
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
+ S+ + ++ + N+ + H K V + N+ ++ D K+++FD
Sbjct: 164 TASDDNSINFFHGTPYRF-NRSLRVHSKFVYDVRYSPNDERFASAGADG--KVYVFDGKT 220
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS 317
G+ ++ I + H I + +SS + S+AG S
Sbjct: 221 GD-QVYEI-DAHKGSIFSISWSPDSSQFVTSSAGYS 254
Score = 95 (38.5 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 34/160 (21%), Positives = 68/160 (42%)
Query: 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL--EDRQV 239
+NK II+ I E+ ++ + P T F G + SG N G++ +W+ ED+ +
Sbjct: 36 ANKAIIIREIEKQENCFQYNEHTAPTTVARFSPSGY-YVASGDNQGNVRIWDCAGEDKIL 94
Query: 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN--GRLLRIREGHSAPP 297
+NQ+ ++ T + + ++ F GN G + GHS+
Sbjct: 95 KNQVTAISGRI-TDLDWDGDSQRIIAVGEGKERYGHAFTADSGNSVGEIF----GHSSVV 149
Query: 298 NYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIAS 337
N + + +A+ D+++ F+ N++L + S
Sbjct: 150 NAVSLRKSRPFRAATASDDNSINFFHGTPYRFNRSLRVHS 189
Score = 91 (37.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 29/117 (24%), Positives = 46/117 (39%)
Query: 458 HVGGVRGVV-SDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
H G + + S + +Q V S + K+W TG + D +
Sbjct: 230 HKGSIFSISWSPDSSQFVTSSAG-YSCKIWD-ANTGSLIREWLSSDKKQLVGTVWPTKDL 287
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ V + ++ C +I + GH +T A SPD+ TAS D T+ WDI
Sbjct: 288 IIVVNSKGNLTYLNPSDCKVIDTIYGHQRSITAATLSPDATHFYTASYDGTVLSWDI 344
>RGD|1311400 [details] [associations]
symbol:Atg16l2 "autophagy related 16-like 2 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1311400 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 CTD:89849 OrthoDB:EOG44F68R
IPI:IPI00196362 RefSeq:NP_001178489.1 UniGene:Rn.104199
ProteinModelPortal:D4A9M7 Ensembl:ENSRNOT00000026286 GeneID:308865
KEGG:rno:308865 UCSC:RGD:1311400 NextBio:659687 Uniprot:D4A9M7
Length = 623
Score = 113 (44.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 29/112 (25%), Positives = 53/112 (47%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
+ I+ISG NDQ ++ W + G ++ I + ++ + L C D T+ +ID
Sbjct: 477 DHIIISGHNDQKIRFWDSR--GPHCIQVIPVQGRVTSLNLSHDQLHLLSCSRDNTLKVID 534
Query: 531 IDTCTI--IRKLSGHM--GQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ I + + G T A FSPD + + S + T+ +WD+ + +L
Sbjct: 535 LRISNIRQVFRADGFKCSSDWTKAVFSPDRSYALVGSSNGTLYIWDVNTGKL 586
Score = 87 (35.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 30/120 (25%), Positives = 54/120 (45%)
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTW----GPVTALSFRTDGPPMM 220
VN + +P ++ G +++ I L N++ +E QT G +T++ F G ++
Sbjct: 343 VNAVCFAPNSSLLATGGADRLIHLWNVVGGR--LEANQTLEGAGGSITSVDFDPSGSQVL 400
Query: 221 VSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA 280
+ N +W + + Q + + H+ VT A F VT S D T+K W +A
Sbjct: 401 AATYNQA-AQLWKVGETQSKETLS-GHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRA 458
Score = 56 (24.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 21/86 (24%), Positives = 32/86 (37%)
Query: 246 AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGN 305
AH V F N LL T D + LW + G + EG + F
Sbjct: 338 AHLSEVNAVCFAPNSSLLATGGADRLIHLW--NVVGGRLEANQTLEGAGGSITSVDF-DP 394
Query: 306 SSDNILSAAGDSTLRIFNTKSETSNK 331
S +L+A + +++ ET +K
Sbjct: 395 SGSQVLAATYNQAAQLWKV-GETQSK 419
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 110 (43.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 193 TDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVT 252
T E L+E V +F TD + + S + +WN + + + H + V
Sbjct: 647 TGEKLLEIKAHEDEVLCCAFSTDDR-FIATCSVDKKVKIWNSMTGGLVH-VYDEHSEQVN 704
Query: 253 GAHFLYNEP--LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNI 310
HF N LL T+S D LKLW ++ + + GH+ N+ +F + D +
Sbjct: 705 CCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMF----GHTNSVNHCRF--SPDDKL 758
Query: 311 L-SAAGDSTLRIFNTKSETSNKNLGI 335
L S + D TL++++ KS K++ +
Sbjct: 759 LASCSADGTLKLWDVKSANERKSINV 784
Score = 97 (39.2 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 29/115 (25%), Positives = 54/115 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH VR + + + +IS +D +++VW+++ L++ + + F+ + S +
Sbjct: 1002 GHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVFLQAHQ--ETVKDFKLLKNSKL 1059
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
L+ D TV I I T I + H + D SPD+ + S D T ++W
Sbjct: 1060 LSWSFDG-TVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1113
Score = 96 (38.9 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 61/283 (21%), Positives = 113/283 (39%)
Query: 64 KLLSVSPQHEDDITC--LSSDFFHIYT-SANNIIYAWRRGID-IVGTYKGHTSPVHLI-L 118
KLL + HED++ C S+D I T S + + W +V Y H+ V+
Sbjct: 650 KLLEIKA-HEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHF 708
Query: 119 PFGPH---LISVDEESNVKVWDIKAEETYLEL-----SFDNDTFKIMGKRWNSCVNVLEP 170
H L + + +K+WD+ +E + S ++ F K SC +
Sbjct: 709 TNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASC-SADGT 767
Query: 171 SPVVDIIGVGLSNKKI-ILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHL 229
+ D+ K I + L E E ++ V S+ DG +MV+ N +
Sbjct: 768 LKLWDVKSAN-ERKSINVKQFFLNSEEPQEDMEVI--VKCCSWSADGTRIMVAAKNK--I 822
Query: 230 TVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI 289
++++ + +I H + F L V + ++LW D L++
Sbjct: 823 FLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVALSQCCVELWNMDSC------LKV 876
Query: 290 RE--GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
+ GH + + + F + S + L+++ D T+R++ TK N
Sbjct: 877 ADCRGHLSWVHCVMFSPDGS-SFLTSSDDQTIRLWETKKVCKN 918
Score = 90 (36.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ + V L V + ++D+C + GH+ + FSPD +T+S D TIR+W+
Sbjct: 852 QNHLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWE 911
Score = 88 (36.0 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 26/109 (23%), Positives = 50/109 (45%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
N ++S D TVK+W TG+ + + + +++ + D T I
Sbjct: 1056 NSKLLSWSFDGTVKIWSII-TGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWS 1114
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ + + +L GH G + + FS DS L T + IR+W++ + +L+
Sbjct: 1115 FELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGELL 1163
Score = 86 (35.3 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 58/262 (22%), Positives = 107/262 (40%)
Query: 44 ETLFVTC-VGKAFHVYGCNHFKLLSVSPQHEDDITCL----SSDFFHIYTSANN-IIYAW 97
+ TC V K ++ L+ V +H + + C +S + + T++++ + W
Sbjct: 670 DRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLW 729
Query: 98 RRGI-DIVGTYKGHTSPV-HL-ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTF 154
+ T GHT+ V H P L S + +K+WD+K+ S + F
Sbjct: 730 DLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANE--RKSINVKQF 787
Query: 155 KIMGKRWNSCVNVLEP--SPVVDIIGVGLSNK-KIILHNILTDESLMEFIQTWGPVTALS 211
+ + + V+ S D + ++ K KI L +I T L E I T G + +
Sbjct: 788 FLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAE-IHT-GHHSTIQ 845
Query: 212 FRTDGPP--MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD 269
+ P + V + + +WN+ D ++ + H V F + +TSS D
Sbjct: 846 YCDFSPQNHLAVVALSQCCVELWNM-DSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDD 904
Query: 270 NTLKLWIFDKADGNGRLLRIRE 291
T++LW K N ++ +E
Sbjct: 905 QTIRLWETKKVCKNSAIVLKQE 926
Score = 79 (32.9 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 31/115 (26%), Positives = 53/115 (46%)
Query: 480 DQTVKVWHFKQTGKPPLRSIKLDNGI---SFFRTHQESSMLAVCLDDFTVNIIDIDT--- 533
D+T K+W F+ PL ++ G S F +S++LA D+ + I ++
Sbjct: 1107 DKTAKIWSFELLS--PLHELRGHKGCVRCSVFSV--DSTLLATGDDNGEIRIWNVSNGEL 1162
Query: 534 ---CTIIRKLSG---HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
C I G H G +TD FSPDS+ L++A ++ W++ + + F
Sbjct: 1163 LHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAGG--YLKWWNVVTGESSQTF 1215
Score = 78 (32.5 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 33/125 (26%), Positives = 54/125 (43%)
Query: 212 FRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271
F DG + G + L V+ E + +IK AH V F ++ + T S D
Sbjct: 624 FSEDGQRIASCGVDKT-LQVFKAETGEKLLEIK-AHEDEVLCCAFSTDDRFIATCSVDKK 681
Query: 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILS-AAGDSTLRIFN-TKSETS 329
+K+W G L+ + + HS N F NS +L+ A+ D L++++ + E
Sbjct: 682 VKIW----NSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECR 737
Query: 330 NKNLG 334
N G
Sbjct: 738 NTMFG 742
Score = 74 (31.1 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 522 DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+D V I+++ I + GH + F+ D + LI++S D +I+VW+ S + +
Sbjct: 982 EDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYV 1039
Score = 71 (30.1 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
N R+ + R GH +IQF + ++S++ DS+++++N +SE
Sbjct: 993 NNRIFQSRIGHKKTVRHIQFTDDGK-TLISSSDDSSIQVWNWQSE 1036
Score = 62 (26.9 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 22/123 (17%), Positives = 57/123 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH+ V V+ ++ +DQT+++W K+ K +K + + F QE+ +
Sbjct: 881 GHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLKQEIDVVF----QENEV 936
Query: 517 LAVCLDDFT-VNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+ + +D+ + +I+ T I + Q++ SP +++ D + + ++ +
Sbjct: 937 MVLAVDNIKRLQLINGKTGQIDYLIEA---QVSCCCLSPHLQYIAFGGEDGAVEILELLN 993
Query: 576 SQL 578
+++
Sbjct: 994 NRI 996
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 113 (44.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 31/128 (24%), Positives = 65/128 (50%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN-GISFFRTHQESS 515
GH V V + + +++SG D+T+++W K TGK +R IK + IS +++ S
Sbjct: 126 GHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVK-TGKC-VRMIKAHSMPISSVHFNRDGS 183
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTD-ADFSPDSRWLITASMDCTIRVWDIP 574
++ D + I D T ++ L A FSP+ ++++ A++D T+++ +
Sbjct: 184 LIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYA 243
Query: 575 SSQLIDCF 582
+ + + +
Sbjct: 244 TGKFLKVY 251
Score = 107 (42.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 33/109 (30%), Positives = 56/109 (51%)
Query: 217 PP--MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKL 274
PP ++VSGS + +W ++ + IK AH ++ HF + L+V++S D + K+
Sbjct: 138 PPSNLIVSGSFDETIRIWEVKTGKCVRMIK-AHSMPISSVHFNRDGSLIVSASHDGSCKI 196
Query: 275 WIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
W D +G L + + S ++ +F N IL A DSTL++ N
Sbjct: 197 W--DAKEGTC-LKTLIDDKSPAVSFAKFSPNGKF-ILVATLDSTLKLSN 241
Score = 84 (34.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 22/112 (19%), Positives = 55/112 (49%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG--ISFFRTHQESSMLAVCLDDFTVNIID 530
+++S +D + K+W K+ G L+++ D +SF + + V D T+ + +
Sbjct: 184 LIVSASHDGSCKIWDAKE-GTC-LKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSN 241
Query: 531 IDTCTIIRKLSGHMGQ---LTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
T ++ +GH + +T A + +++++ S D + +WD+ + ++
Sbjct: 242 YATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNIL 293
Score = 79 (32.9 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 220 MVSGSNTGHL-TVWNLEDRQVENQIK--KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWI 276
+ + ++TG+ T N+ + +K + H ++ F + LL ++S D T+ LW
Sbjct: 12 VANANSTGNAGTSGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILW- 70
Query: 277 FDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
+ N L+ EGHS+ + + + + S SA+ D TLRI++ +S
Sbjct: 71 ---SATNYSLIHRYEGHSSGISDLA-WSSDSHYTCSASDDCTLRIWDARS 116
Score = 56 (24.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 522 DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS--MDCTIRVW 571
+D V + D+ I+++L GH + P + ++ +D TIR+W
Sbjct: 278 EDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 127 (49.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 31/127 (24%), Positives = 55/127 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH + + ++++G D+T +W +GK D+ I +
Sbjct: 259 GHCAEISSALFSWDCSLILTGSMDKTCMLWD-ATSGKCVATLTGHDDEILDSCFDYTGKL 317
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+A D T + + T I KL GH G+++ F+P L+T S D T R+WD+ +
Sbjct: 318 IATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTG 377
Query: 577 QLIDCFQ 583
Q + +
Sbjct: 378 QCLQVLE 384
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 51/222 (22%), Positives = 97/222 (43%)
Query: 106 TYKGHTSPVHLIL---PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN 162
T +GH + V+ I P+G + + + K+W + + Y +F T +I+
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYH--TFRGHTAEIV----- 181
Query: 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS 222
C++ +P ++ G + L +I + E ++ + +LSF T G +++
Sbjct: 182 -CLSF---NPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGD-RIIT 236
Query: 223 GSNTGHLTVWNLED-RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
GS + VW+ R+V I H ++ A F ++ L++T S D T LW D
Sbjct: 237 GSFDHTVVVWDASTGRKVHTLI--GHCAEISSALFSWDCSLILTGSMDKTCMLW--DAT- 291
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
+G+ + GH + + I +A+ D T R++N
Sbjct: 292 -SGKCVATLTGHD-DEILDSCFDYTGKLIATASADGTARVYN 331
Score = 107 (42.7 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 40/150 (26%), Positives = 66/150 (44%)
Query: 432 SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491
++G D+ A G H + GH + + + + +V +G D T K+W Q+
Sbjct: 151 ATGSFDKTCKLWSAETGKCYHTFR-GHTAEIVCLSFNPQSTVVATGSMDTTAKLWDI-QS 208
Query: 492 GKPPLRSI-KLDNGISF-FRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTD 549
G+ + L IS F T + + D TV + D T + L GH +++
Sbjct: 209 GEEVVTLTGHLAEIISLSFDTSGDRIITGSF--DHTVVVWDASTGRKVHTLIGHCAEISS 266
Query: 550 ADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
A FS D ++T SMD T +WD S + +
Sbjct: 267 ALFSWDCSLILTGSMDKTCMLWDATSGKCV 296
Score = 67 (28.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 22/85 (25%), Positives = 36/85 (42%)
Query: 242 QIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQ 301
++ +AH +T +T S D T K+W D A G L EGH I
Sbjct: 86 KVLRAHILPLTNVALNKAGSCFITGSYDRTCKVW--DTASGEE--LHTLEGHRNVVYAIA 141
Query: 302 FYGNSSDNILSAAGDSTLRIFNTKS 326
F D I + + D T ++++ ++
Sbjct: 142 FNNPYGDKIATGSFDKTCKLWSAET 166
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 149 (57.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 454 NQPGHVGGVRGV-VSDNLNQIVISGGNDQTVKVWHFKQTGKP-PLRSIKLDNGISFFRTH 511
N GH VR + + + + I++S D+T+++W + GK + S L +
Sbjct: 148 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQ-WVYCCSIS 206
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ SML + +V + + + T+IRKL GH + DFSPDS L+TAS D + +W
Sbjct: 207 PDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMW 266
Query: 572 D 572
D
Sbjct: 267 D 267
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 149 (57.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 454 NQPGHVGGVRGV-VSDNLNQIVISGGNDQTVKVWHFKQTGKP-PLRSIKLDNGISFFRTH 511
N GH VR + + + + I++S D+T+++W + GK + S L +
Sbjct: 148 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQ-WVYCCSIS 206
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ SML + +V + + + T+IRKL GH + DFSPDS L+TAS D + +W
Sbjct: 207 PDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMW 266
Query: 572 D 572
D
Sbjct: 267 D 267
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 149 (57.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 454 NQPGHVGGVRGV-VSDNLNQIVISGGNDQTVKVWHFKQTGKP-PLRSIKLDNGISFFRTH 511
N GH VR + + + + I++S D+T+++W + GK + S L +
Sbjct: 150 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQ-WVYCCSIS 208
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ SML + +V + + + T+IRKL GH + DFSPDS L+TAS D + +W
Sbjct: 209 PDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMW 268
Query: 572 D 572
D
Sbjct: 269 D 269
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 149 (57.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 454 NQPGHVGGVRGV-VSDNLNQIVISGGNDQTVKVWHFKQTGKP-PLRSIKLDNGISFFRTH 511
N GH VR + + + + I++S D+T+++W + GK + S L +
Sbjct: 150 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQ-WVYCCSIS 208
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ SML + +V + + + T+IRKL GH + DFSPDS L+TAS D + +W
Sbjct: 209 PDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMW 268
Query: 572 D 572
D
Sbjct: 269 D 269
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 149 (57.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 454 NQPGHVGGVRGV-VSDNLNQIVISGGNDQTVKVWHFKQTGKP-PLRSIKLDNGISFFRTH 511
N GH VR + + + + I++S D+T+++W + GK + S L +
Sbjct: 150 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQ-WVYCCSIS 208
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ SML + +V + + + T+IRKL GH + DFSPDS L+TAS D + +W
Sbjct: 209 PDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMW 268
Query: 572 D 572
D
Sbjct: 269 D 269
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 148 (57.2 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 33/127 (25%), Positives = 55/127 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH + + + V SG D +K+W ++ G R + R +
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCV-FRYRGHSQAVRCLRFSPDGKW 161
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA DD TV + D+ ++ + GH G + +F P+ L + S D TIR WD+
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF 221
Query: 577 QLIDCFQ 583
Q++ C +
Sbjct: 222 QVVSCIE 228
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 30/127 (23%), Positives = 59/127 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESS 515
GH V V + +++++G +++VW + K LR++ I H
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDL-EAAKI-LRTLMGHKANICSLDFHPYGE 118
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+A D + + DI + + GH + FSPD +WL +A+ D T+++WD+ +
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 576 SQLIDCF 582
+++ F
Sbjct: 179 GKMMSEF 185
Score = 122 (48.0 bits), Expect = 0.00043, P = 0.00043
Identities = 46/193 (23%), Positives = 82/193 (42%)
Query: 109 GHTSPVHLILPFGPH--LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVN 166
GHTSPV + P +++ + +++VWD++A + L MG + N C
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL---------MGHKANICS- 110
Query: 167 VLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT 226
L+ P + + G + I L +I + + V L F DG + S ++
Sbjct: 111 -LDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK-WLASAADD 168
Query: 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRL 286
+ +W+L ++ ++ H V F NE LL + S D T++ W +K ++
Sbjct: 169 HTVKLWDLTAGKMMSEFP-GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF----QV 223
Query: 287 LRIREGHSAPPNY 299
+ EG P Y
Sbjct: 224 VSCIEGEPGPVRY 236
Score = 49 (22.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 14/66 (21%), Positives = 33/66 (50%)
Query: 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS-TLR 320
LL T D + LW +K + + GH++P ++ N+ + ++ A S ++R
Sbjct: 35 LLATGGDDCRVNLWSINKPN----CIMSLTGHTSPVESVRL--NTPEELIVAGSQSGSIR 88
Query: 321 IFNTKS 326
+++ ++
Sbjct: 89 VWDLEA 94
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 149 (57.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 454 NQPGHVGGVRGV-VSDNLNQIVISGGNDQTVKVWHFKQTGKP-PLRSIKLDNGISFFRTH 511
N GH VR + + + + I++S D+T+++W + GK + S L +
Sbjct: 165 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQ-WVYCCSIS 223
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ SML + +V + + + T+IRKL GH + DFSPDS L+TAS D + +W
Sbjct: 224 PDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMW 283
Query: 572 D 572
D
Sbjct: 284 D 284
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 134 (52.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQ 512
GH+ V V + + +G D+TV++W +Q G S++L G +
Sbjct: 424 GHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQ-GN----SVRLFTGHRGPVLALAFSP 478
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
LA +D + + D+ + T+ ++L GH +T FSPDS + +ASMD ++RVWD
Sbjct: 479 NGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWD 538
Query: 573 I 573
I
Sbjct: 539 I 539
Score = 122 (48.0 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 32/106 (30%), Positives = 52/106 (49%)
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIK---LDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532
S +D+T ++W F +T PLR LD + + H S+ LA D TV +
Sbjct: 401 SASHDRTARLWSFDRTY--PLRIYAGHLLD--VDCVKFHPNSNYLATGSTDKTVRLWSTQ 456
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+R +GH G + FSP+ ++L +A D +++WD+ S L
Sbjct: 457 QGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Score = 63 (27.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 278 DKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETS 329
++ D G ++I GH P +F +SS +LS + D ++R ++ +S T+
Sbjct: 326 EEDDSAGTEMKILRGHCGPVYSTRFLSDSS-GLLSCSEDMSIRYWDLRSFTN 376
Score = 47 (21.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 21/84 (25%), Positives = 37/84 (44%)
Query: 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNY 299
E +I + H V FL + L++ S D +++ W D +L +GH+ P
Sbjct: 334 EMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYW--DLRSFTNTVLY--QGHAYPVWD 389
Query: 300 IQFYGNSSDNILSAAGDSTLRIFN 323
+ S SA+ D T R+++
Sbjct: 390 LDI-SPCSLYFASASHDRTARLWS 412
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 112 (44.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 29/116 (25%), Positives = 54/116 (46%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531
Q+ +G +D TVK+W ++ K + + + + + S + D + + D+
Sbjct: 155 QLACTGSDDGTVKLWDIRK--KASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDL 212
Query: 532 DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI----PSSQLIDCFQ 583
+I + GH +T S D +L++ SMD ++RVWDI P + + FQ
Sbjct: 213 RQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQ 268
Score = 109 (43.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 61/267 (22%), Positives = 111/267 (41%)
Query: 72 HEDDITCLSSDFFH-----IYTSA-NNIIYAWRRGIDI--VGTYKGHTSPVHLILPF--- 120
HE ++ C FH + +S + +I W D T KGH+ V + L +
Sbjct: 55 HEGEVYCCK---FHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAV-MELHYNTD 110
Query: 121 GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG 180
G L S + V VWD + E L + +F NSC P + G
Sbjct: 111 GSLLFSASTDKTVCVWDSETGERVKRLK-GHTSFV------NSCFPARR-GP--QLACTG 160
Query: 181 LSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE 240
+ + L +I S+ F T+ V +++F D ++SG + VW+L ++
Sbjct: 161 SDDGTVKLWDIRKKASVHTFQNTY-QVLSVTFN-DTSDQIISGGIDNDIKVWDLRQNKLI 218
Query: 241 NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREG--HSAPPN 298
++ H VTG + L+++S DN++++W R ++I +G H+ N
Sbjct: 219 YSMQ-GHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKN 277
Query: 299 YIQF-YGNSSDNILSAAGDSTLRIFNT 324
++ + I + + D + I++T
Sbjct: 278 LLRCSWSADGSKIAAGSADRFVYIWDT 304
Score = 96 (38.9 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 32/125 (25%), Positives = 54/125 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTH---- 511
GH V G+ ++S D +V+VW + P R +K+ G + F +
Sbjct: 223 GHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFA-PKERCVKIFQGNVHNFEKNLLRC 281
Query: 512 ---QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
+ S +A D V I D T I+ KL GH G + + F P+ +++ S D +
Sbjct: 282 SWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRL 341
Query: 569 RVWDI 573
+ +I
Sbjct: 342 YIGEI 346
Score = 84 (34.6 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 34/145 (23%), Positives = 61/145 (42%)
Query: 183 NKKIILHNILTD-ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN 241
++ I++ N+ D E+ G V L + TDG ++ S S + VW+ E +
Sbjct: 77 DRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGS-LLFSASTDKTVCVWDSETGERVK 135
Query: 242 QIKKAHRKVVTGAHFLYNEPLLV-TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI 300
++K H V P L T S D T+KLW K + S
Sbjct: 136 RLK-GHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVT---- 190
Query: 301 QFYGNSSDNILSAAGDSTLRIFNTK 325
+ ++SD I+S D+ +++++ +
Sbjct: 191 --FNDTSDQIISGGIDNDIKVWDLR 213
Score = 80 (33.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK-KAHRKVVTGAHFLYNEPLL 263
G V F +G + SG + + +WN+ EN K H V H+ + LL
Sbjct: 57 GEVYCCKFHPNGATLASSGYDR-LILMWNVYG-DCENYATLKGHSGAVMELHYNTDGSLL 114
Query: 264 VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL-SAAGDSTLRIF 322
++S D T+ +W D G R+ R++ GH++ N F + + + D T++++
Sbjct: 115 FSASTDKTVCVW--DSETGE-RVKRLK-GHTSFVNSC-FPARRGPQLACTGSDDGTVKLW 169
Query: 323 NTKSETS 329
+ + + S
Sbjct: 170 DIRKKAS 176
Score = 53 (23.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKV 485
PGH G V V IV+SG +D+ + +
Sbjct: 314 PGHAGSVNEVAFHPEEPIVLSGSSDKRLYI 343
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 150 (57.9 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 46/179 (25%), Positives = 78/179 (43%)
Query: 408 KQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGS--YGHDNQ-PGHVGGVRG 464
K K+S C + G F+ G ++ ++ SG + Y D H V
Sbjct: 209 KFGKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLC 268
Query: 465 VVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDF 524
+ ++++ SG D +K+W + TG R G++ ++ S L D
Sbjct: 269 IDFSRDSEMLASGSQDGKIKIWRIR-TGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQ 327
Query: 525 TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
T I + + ++++ GH + A F+ D +ITAS DCT++VWD S+ DC Q
Sbjct: 328 TARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD---SKTTDCLQ 383
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 151 (58.2 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 31/123 (25%), Positives = 67/123 (54%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH + + + + ++SG D+T ++W +TG+ L+ ++++NG++
Sbjct: 400 GHEQDIYSLDFSHNGRFIVSGSGDRTARLWDV-ETGQCILK-LEIENGVTAIAISPNDQF 457
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+AV D + + + T++ +L GH + FSPDS L++ S+D TI+VW++ ++
Sbjct: 458 IAVGSLDQIIRVWSVSG-TLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQAT 516
Query: 577 QLI 579
+ +
Sbjct: 517 RSV 519
Score = 111 (44.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 38/133 (28%), Positives = 59/133 (44%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGI--SFFRTHQES 514
GH V + + I++SG D+T+KVW + T L +IK + GI + + H +
Sbjct: 482 GHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPE-GICKATYTGHTDF 540
Query: 515 SM-LAVCLD---------DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
+ +AV D D ++ D+ T GH + FSPD R + S
Sbjct: 541 VLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSG 600
Query: 565 DCTIRVWDI-PSS 576
D R+W I P+S
Sbjct: 601 DLRARIWSIDPAS 613
Score = 59 (25.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 263 LVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322
LVT + D +KLW D + R + GH + F N I+S +GD T R++
Sbjct: 375 LVTGTEDRQIKLW--DLSTQKVRY--VFSGHEQDIYSLDFSHNGRF-IVSGSGDRTARLW 429
Query: 323 NTKS 326
+ ++
Sbjct: 430 DVET 433
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 125 (49.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 34/135 (25%), Positives = 56/135 (41%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG--------KPPLRSIKLDNGISFF 508
GH V + D ++ S +D T+K+W KQ + +IK
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGT 406
Query: 509 RTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
+ MLA D TV + D+D I L+ H + FSPD R+L + S D +
Sbjct: 407 NNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCV 466
Query: 569 RVWDIPSSQLIDCFQ 583
+W+ + L+ ++
Sbjct: 467 HIWNTQTGALVHSYR 481
Score = 71 (30.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 43/169 (25%), Positives = 62/169 (36%)
Query: 183 NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN- 241
NK ++L ES + FI W PV+ L + SGS +WNL +
Sbjct: 160 NKAVVLRG---HESEV-FICAWNPVSDL---------LASGSGDSTARIWNLSENSTSGS 206
Query: 242 -QIKKAH-----------RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI 289
Q+ H K VT + LL T S D ++W DGN L
Sbjct: 207 TQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT---KDGN---LAS 260
Query: 290 REGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
G P + + + ILSA D T I++ + + + SA
Sbjct: 261 TLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSA 309
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 125 (49.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 34/135 (25%), Positives = 56/135 (41%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG--------KPPLRSIKLDNGISFF 508
GH V + D ++ S +D T+K+W KQ + +IK
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGT 406
Query: 509 RTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
+ MLA D TV + D+D I L+ H + FSPD R+L + S D +
Sbjct: 407 NNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCV 466
Query: 569 RVWDIPSSQLIDCFQ 583
+W+ + L+ ++
Sbjct: 467 HIWNTQTGALVHSYR 481
Score = 71 (30.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 43/169 (25%), Positives = 62/169 (36%)
Query: 183 NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN- 241
NK ++L ES + FI W PV+ L + SGS +WNL +
Sbjct: 160 NKAVVLRG---HESEV-FICAWNPVSDL---------LASGSGDSTARIWNLSENSTSGS 206
Query: 242 -QIKKAH-----------RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI 289
Q+ H K VT + LL T S D ++W DGN L
Sbjct: 207 TQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT---KDGN---LAS 260
Query: 290 REGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
G P + + + ILSA D T I++ + + + SA
Sbjct: 261 TLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSA 309
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 125 (49.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 34/135 (25%), Positives = 56/135 (41%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG--------KPPLRSIKLDNGISFF 508
GH V + D ++ S +D T+K+W KQ + +IK
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGT 406
Query: 509 RTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
+ MLA D TV + D+D I L+ H + FSPD R+L + S D +
Sbjct: 407 NNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCV 466
Query: 569 RVWDIPSSQLIDCFQ 583
+W+ + L+ ++
Sbjct: 467 HIWNTQTGALVHSYR 481
Score = 71 (30.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 43/169 (25%), Positives = 62/169 (36%)
Query: 183 NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN- 241
NK ++L ES + FI W PV+ L + SGS +WNL +
Sbjct: 160 NKAVVLRG---HESEV-FICAWNPVSDL---------LASGSGDSTARIWNLSENSTSGP 206
Query: 242 -QIKKAH-----------RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI 289
Q+ H K VT + LL T S D ++W DGN L
Sbjct: 207 TQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT---KDGN---LAS 260
Query: 290 REGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
G P + + + ILSA D T I++ + + + SA
Sbjct: 261 TLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSA 309
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 106 (42.4 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 32/123 (26%), Positives = 64/123 (52%)
Query: 215 DGPPMMVSGSNTGHLTVWNLEDRQVENQIKK---AHRKVVTGAHFLYNEPLLVTSSPDNT 271
D P +VSGS+ + +W + V Q KK H+++V +F + + ++S D +
Sbjct: 327 DSPERLVSGSDDFTMFLW---EPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKS 383
Query: 272 LKLWIFDKADG-NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
++LW +G G+ + + GH P + + +S +LS + DSTL+I+ +++
Sbjct: 384 VRLW-----NGITGQFVTVFRGHVGPVYQVSWSADSR-LLLSGSKDSTLKIWEIRTKKLK 437
Query: 331 KNL 333
++L
Sbjct: 438 QDL 440
Score = 105 (42.0 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 25/105 (23%), Positives = 51/105 (48%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
++SG +D T+ +W + +P R ++ + +A D +V + + T
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ GH+G + +S DSR L++ S D T+++W+I + +L
Sbjct: 392 GQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKL 436
Score = 102 (41.0 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 30/117 (25%), Positives = 56/117 (47%)
Query: 470 LNQIVISGGNDQTVKVWHFKQTGKP-PLRSIKLDNGISFFRTHQES-SMLAVCLDDFTVN 527
+N + +S + ++ F TG+ P K + +T +S L DDFT+
Sbjct: 285 INSLALS--TEYVLRTGAFDHTGRQYPPNEEKQKALERYNKTKGDSPERLVSGSDDFTMF 342
Query: 528 IIDIDTCTIIRK-LSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
+ + +K L+GH + FSPD +W+ +AS D ++R+W+ + Q + F+
Sbjct: 343 LWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFR 399
Score = 91 (37.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 50/229 (21%), Positives = 100/229 (43%)
Query: 107 YKGHTSPVHLILPFGPHL----ISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN 162
Y + S L++P G +L +SV++ + V+ +A ++ + T I G
Sbjct: 55 YSFYVSDEELLVPVGTYLEKNKVSVEKVLTI-VYQQQAVFRIRPVNRCSQT--IAGHA-- 109
Query: 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLM--EFIQTWGPVTALSFRTDGPPMM 220
V + SP + G + + L ++ T+ L + + W V +++ DG +
Sbjct: 110 EAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNW--VLTVAWSPDGKHL- 166
Query: 221 VSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL---YNEPL--LVTSSPDNTLKLW 275
VSGS +G + WN + ++E H+K +TG + + P VTSS D ++W
Sbjct: 167 VSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIW 226
Query: 276 IFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
+ + GH+ +++ G+ I + + D T++++ T
Sbjct: 227 DITLK----KSIICLSGHTLAVTCVKWGGDGI--IYTGSQDCTIKMWET 269
Score = 75 (31.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+S +L D T+ I +I T + + L GH ++ D+SPD +++ D +++W
Sbjct: 413 DSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 58 (25.5 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
PGH V V + V+SGG D+ +K+W
Sbjct: 441 PGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 148 (57.2 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 33/127 (25%), Positives = 55/127 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH + + + V SG D +K+W ++ G R + R +
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCV-FRYRGHSQAVRCLRFSPDGKW 161
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA DD TV + D+ ++ + GH G + +F P+ L + S D TIR WD+
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF 221
Query: 577 QLIDCFQ 583
Q++ C +
Sbjct: 222 QVVSCIE 228
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 51/221 (23%), Positives = 93/221 (42%)
Query: 109 GHTSPVHLILPFGPH--LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVN 166
GHTSPV + P +++ + +++VWD++A + L MG + N C
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL---------MGHKANICS- 110
Query: 167 VLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT 226
L+ P + + G + I L +I + + V L F DG + S ++
Sbjct: 111 -LDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK-WLASAADD 168
Query: 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRL 286
+ +W+L ++ ++ H V F NE LL + S D T++ W +K ++
Sbjct: 169 HTVKLWDLTAGKMMSEFP-GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF----QV 223
Query: 287 LRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
+ EG P + F N L + +LR++ + E
Sbjct: 224 VSCIEGEPGPVRSVLF--NPDGCCLYSGCQDSLRVYGWEPE 262
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 30/127 (23%), Positives = 59/127 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESS 515
GH V V + +++++G +++VW + K LR++ I H
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDL-EAAKI-LRTLMGHKANICSLDFHPYGE 118
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+A D + + DI + + GH + FSPD +WL +A+ D T+++WD+ +
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 576 SQLIDCF 582
+++ F
Sbjct: 179 GKMMSEF 185
Score = 49 (22.3 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 14/66 (21%), Positives = 33/66 (50%)
Query: 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS-TLR 320
LL T D + LW +K + + GH++P ++ N+ + ++ A S ++R
Sbjct: 35 LLATGGDDCRVNLWSINKPN----CIMSLTGHTSPVESVRL--NTPEELIVAGSQSGSIR 88
Query: 321 IFNTKS 326
+++ ++
Sbjct: 89 VWDLEA 94
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 148 (57.2 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 33/127 (25%), Positives = 55/127 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH + + + V SG D +K+W ++ G R + R +
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCV-FRYRGHSQAVRCLRFSPDGKW 161
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA DD TV + D+ ++ + GH G + +F P+ L + S D TIR WD+
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF 221
Query: 577 QLIDCFQ 583
Q++ C +
Sbjct: 222 QVVSCIE 228
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 51/221 (23%), Positives = 93/221 (42%)
Query: 109 GHTSPVHLILPFGPH--LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVN 166
GHTSPV + P +++ + +++VWD++A + L MG + N C
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL---------MGHKANICS- 110
Query: 167 VLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT 226
L+ P + + G + I L +I + + V L F DG + S ++
Sbjct: 111 -LDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK-WLASAADD 168
Query: 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRL 286
+ +W+L ++ ++ H V F NE LL + S D T++ W +K ++
Sbjct: 169 HTVKLWDLTAGKMMSEFP-GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF----QV 223
Query: 287 LRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
+ EG P + F N L + +LR++ + E
Sbjct: 224 VSCIEGEPGPVRSVLF--NPDGCCLYSGCQDSLRVYGWEPE 262
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 30/127 (23%), Positives = 59/127 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESS 515
GH V V + +++++G +++VW + K LR++ I H
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDL-EAAKI-LRTLMGHKANICSLDFHPYGE 118
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+A D + + DI + + GH + FSPD +WL +A+ D T+++WD+ +
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 576 SQLIDCF 582
+++ F
Sbjct: 179 GKMMSEF 185
Score = 49 (22.3 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 14/66 (21%), Positives = 33/66 (50%)
Query: 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS-TLR 320
LL T D + LW +K + + GH++P ++ N+ + ++ A S ++R
Sbjct: 35 LLATGGDDCRVNLWSINKPN----CIMSLTGHTSPVESVRL--NTPEELIVAGSQSGSIR 88
Query: 321 IFNTKS 326
+++ ++
Sbjct: 89 VWDLEA 94
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 148 (57.2 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 33/127 (25%), Positives = 55/127 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH + + + V SG D +K+W ++ G R + R +
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCV-FRYRGHSQAVRCLRFSPDGKW 161
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA DD TV + D+ ++ + GH G + +F P+ L + S D TIR WD+
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF 221
Query: 577 QLIDCFQ 583
Q++ C +
Sbjct: 222 QVVSCIE 228
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 51/221 (23%), Positives = 93/221 (42%)
Query: 109 GHTSPVHLILPFGPH--LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVN 166
GHTSPV + P +++ + +++VWD++A + L MG + N C
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL---------MGHKANICS- 110
Query: 167 VLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT 226
L+ P + + G + I L +I + + V L F DG + S ++
Sbjct: 111 -LDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK-WLASAADD 168
Query: 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRL 286
+ +W+L ++ ++ H V F NE LL + S D T++ W +K ++
Sbjct: 169 HTVKLWDLTAGKMMSEFP-GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF----QV 223
Query: 287 LRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
+ EG P + F N L + +LR++ + E
Sbjct: 224 VSCIEGEPGPVRSVLF--NPDGCCLYSGCQDSLRVYGWEPE 262
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 30/127 (23%), Positives = 59/127 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESS 515
GH V V + +++++G +++VW + K LR++ I H
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDL-EAAKI-LRTLMGHKANICSLDFHPYGE 118
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+A D + + DI + + GH + FSPD +WL +A+ D T+++WD+ +
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 576 SQLIDCF 582
+++ F
Sbjct: 179 GKMMSEF 185
Score = 49 (22.3 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 14/66 (21%), Positives = 33/66 (50%)
Query: 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS-TLR 320
LL T D + LW +K + + GH++P ++ N+ + ++ A S ++R
Sbjct: 35 LLATGGDDCRVNLWSINKPN----CIMSLTGHTSPVESVRL--NTPEELIVAGSQSGSIR 88
Query: 321 IFNTKS 326
+++ ++
Sbjct: 89 VWDLEA 94
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 148 (57.2 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 33/127 (25%), Positives = 55/127 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH + + + V SG D +K+W ++ G R + R +
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCV-FRYRGHSQAVRCLRFSPDGKW 161
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA DD TV + D+ ++ + GH G + +F P+ L + S D TIR WD+
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF 221
Query: 577 QLIDCFQ 583
Q++ C +
Sbjct: 222 QVVSCIE 228
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 51/221 (23%), Positives = 93/221 (42%)
Query: 109 GHTSPVHLILPFGPH--LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVN 166
GHTSPV + P +++ + +++VWD++A + L MG + N C
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL---------MGHKANICS- 110
Query: 167 VLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT 226
L+ P + + G + I L +I + + V L F DG + S ++
Sbjct: 111 -LDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK-WLASAADD 168
Query: 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRL 286
+ +W+L ++ ++ H V F NE LL + S D T++ W +K ++
Sbjct: 169 HTVKLWDLTAGKMMSEFP-GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF----QV 223
Query: 287 LRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
+ EG P + F N L + +LR++ + E
Sbjct: 224 VSCIEGEPGPVRSVLF--NPDGCCLYSGCQDSLRVYGWEPE 262
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 30/127 (23%), Positives = 59/127 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESS 515
GH V V + +++++G +++VW + K LR++ I H
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDL-EAAKI-LRTLMGHKANICSLDFHPYGE 118
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+A D + + DI + + GH + FSPD +WL +A+ D T+++WD+ +
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 576 SQLIDCF 582
+++ F
Sbjct: 179 GKMMSEF 185
Score = 49 (22.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 14/66 (21%), Positives = 33/66 (50%)
Query: 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS-TLR 320
LL T D + LW +K + + GH++P ++ N+ + ++ A S ++R
Sbjct: 35 LLATGGDDCRVNLWSINKPN----CIMSLTGHTSPVESVRL--NTPEELIVAGSQSGSIR 88
Query: 321 IFNTKS 326
+++ ++
Sbjct: 89 VWDLEA 94
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 98 (39.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 29/108 (26%), Positives = 57/108 (52%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRS---IKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
++SG +D T+ +W+ K+T + R ++L N + F ++ +A D +V +
Sbjct: 332 LVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVF---SPDTRYIASASFDKSVKLWC 388
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
T + L GH+G + +S DSR L++ S D T++V+++ + L
Sbjct: 389 GRTGKYLASLRGHVGPVYQVAWSADSRLLVSGSADSTLKVFELKTKSL 436
Score = 98 (39.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 30/116 (25%), Positives = 56/116 (48%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH+ V VV + + S D++VK+W +TGK L S++ G + S
Sbjct: 358 GHMQLVNQVVFSPDTRYIASASFDKSVKLW-CGRTGKY-LASLRGHVGPVYQVAWSADSR 415
Query: 517 LAVCLD-DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
L V D T+ + ++ T ++ L GH ++ D+SP+ +++ D +++W
Sbjct: 416 LLVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLW 471
Score = 98 (39.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 51/195 (26%), Positives = 84/195 (43%)
Query: 109 GHTSPV--HLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVN 166
GH PV P G L S + +++WDI+ LEL T K K W C+
Sbjct: 103 GHGEPVISAQFSPDGRGLASGSGDQTMRIWDIE-----LELPLH--TCK-SHKSWVLCIA 154
Query: 167 VLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQT---WGPVTALSFRT--DGPP--M 219
SP I N +I + N T E + + ++ W +T+L+++ P +
Sbjct: 155 W---SPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQW--ITSLAWQPMHKDPTCRL 209
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
+ S G++ +W+ V + H VT + E L+ + S D T+K+W +
Sbjct: 210 LASCGKDGNIFIWDTVQGTVVRCLS-GHTASVTCLRW-GGEGLIYSGSQDRTVKMW---R 264
Query: 280 ADGNGRLLRIREGHS 294
AD +G + R GH+
Sbjct: 265 AD-DGVMCRNMTGHA 278
>POMBASE|SPBC21B10.05c [details] [associations]
symbol:pop3 "WD repeat protein Pop3" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0031929 "TOR signaling cascade" evidence=TAS] [GO:0031931
"TORC1 complex" evidence=IDA] [GO:0031932 "TORC2 complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC21B10.05c GO:GO:0005829 GO:GO:0005634
GO:GO:0000226 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031929 EMBL:CU329671 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0000070 GO:GO:0031931 GO:GO:0031932
KO:K08266 HOGENOM:HOG000208395 OMA:NNKGNCY OrthoDB:EOG4GF6PT
EMBL:AB016895 PIR:T39922 RefSeq:NP_595682.1
ProteinModelPortal:O74184 IntAct:O74184 STRING:O74184
EnsemblFungi:SPBC21B10.05c.1 GeneID:2540645 KEGG:spo:SPBC21B10.05c
NextBio:20801769 Uniprot:O74184
Length = 314
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 58/240 (24%), Positives = 113/240 (47%)
Query: 106 TYKGHTSPVHLILPF--GPHLISVDEESNVKVWDIKA---EETYLELSFDNDTFKIMGKR 160
T++GHT+ V I G L + E+ VKVWD++A + Y S ND ++
Sbjct: 78 TFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSVQRNYDHKSPVNDL--LIHPN 135
Query: 161 WNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMM 220
++ + S V +G ++ H ++ +E + P+++++ +DG M+
Sbjct: 136 QGELLSC-DQSGRVRAWDLGENS---CTHELIPEEDV--------PMSSITVGSDGS-ML 182
Query: 221 VSGSNTGHLTVWNLEDRQ----VENQIK-KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
++G+N G+ VW + + Q ++ +K +AH++ +T + L T S D T+ +W
Sbjct: 183 IAGNNKGNCYVWRMLNHQGASLLQPVVKFQAHQRYITRCVLSPDVKHLATCSADATVNIW 242
Query: 276 IFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS-ETSNKNLG 334
+ D + L R +GH F +S+ +++A+ D R++ S ET + G
Sbjct: 243 STE--DMSFMLERRLQGHQRWVWDCAFSADST-YLVTASSDHVARLWELSSGETIRQYSG 299
Score = 117 (46.2 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 517 LAVCLDDFTVNIIDIDTCTII--RKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
LA C D TVNI + + + R+L GH + D FS DS +L+TAS D R+W++
Sbjct: 230 LATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDCAFSADSTYLVTASSDHVARLWELS 289
Query: 575 SSQLI 579
S + I
Sbjct: 290 SGETI 294
Score = 72 (30.4 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 29/116 (25%), Positives = 48/116 (41%)
Query: 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDES--LMEFIQTWGPVTALSFRTDGPPM 219
+S VN L SP + N + L++I T LM F VTA++F DG
Sbjct: 40 DSQVNRLCISPDKKFLAAA-GNPHVRLYDINTSSQMPLMTFEGHTNNVTAIAFHCDGK-W 97
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
+ + S G + VW++ V+ H+ V N+ L++ ++ W
Sbjct: 98 LATSSEDGTVKVWDMRAPSVQRNYD--HKSPVNDLLIHPNQGELLSCDQSGRVRAW 151
Score = 62 (26.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 22/104 (21%), Positives = 45/104 (43%)
Query: 221 VSGSNTGHLTVWNLE-DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
++ + H+ ++++ Q+ + H VT F + L TSS D T+K+W
Sbjct: 55 LAAAGNPHVRLYDINTSSQMPLMTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVW---- 110
Query: 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
D ++ H +P N + + N + +LS +R ++
Sbjct: 111 -DMRAPSVQRNYDHKSPVNDLLIHPNQGE-LLSCDQSGRVRAWD 152
Score = 43 (20.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRI 321
LLV+S D+T++ W + G + R A + + L+AAG+ +R+
Sbjct: 12 LLVSSGYDHTIRFW--EALSG----ICSRTIQHADSQVNRLCISPDKKFLAAAGNPHVRL 65
Query: 322 F--NTKSE 327
+ NT S+
Sbjct: 66 YDINTSSQ 73
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 126 (49.4 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 33/101 (32%), Positives = 54/101 (53%)
Query: 480 DQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQESSMLAVCLDDFTVNIIDIDTCT 535
D+TV++W +Q G S++L G + LA +D + + D+ + T
Sbjct: 1 DKTVRLWSAQQ-GN----SVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGT 55
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
+ ++L GH +T FSPDS + +ASMD ++RVWDI S+
Sbjct: 56 LFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRST 96
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 118 (46.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 37/126 (29%), Positives = 64/126 (50%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDRQVENQIKKA---HRKVVTGAHFLYNE 260
G VT+L+ + P M++SGS L +WNL D Q K++ H +V+ +
Sbjct: 16 GWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVISSDG 75
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDST 318
+++S D +L+LW +G+ R GH+ + F S+DN I+S + D T
Sbjct: 76 AYALSASWDKSLRLWELS----SGQTTRTFVGHTNDVLSVSF---SADNRQIVSGSRDRT 128
Query: 319 LRIFNT 324
++++NT
Sbjct: 129 IKLWNT 134
Score = 71 (30.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 33/127 (25%), Positives = 52/127 (40%)
Query: 457 GHVGGVRGV-VSDN-LNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQES 514
GH V V S N N +++S G D+ VKVW + I I+ +
Sbjct: 146 GHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASC-RLQTDHIGHTGYINTVTISPDG 204
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDA-DFSPDSRWLITASMDCTIRVWDI 573
S+ A D + D++ + L H G A FSP+ WL A+ +I ++D+
Sbjct: 205 SLCASGGKDGVTMLWDLNESKHLYSL--HAGDEIHALVFSPNRYWLCAATSS-SITIFDL 261
Query: 574 PSSQLID 580
+D
Sbjct: 262 EKKSKVD 268
Score = 45 (20.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 25/128 (19%), Positives = 43/128 (33%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH G + V + SGG D +W ++ L S+ + I
Sbjct: 190 GHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKH--LYSLHAGDEIHALVFSPNRYW 247
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLS------GHMG---QLTDADFSPDSRWLITASMDCT 567
L ++ I D++ + + +L G + +S D + L D
Sbjct: 248 LCAATSS-SITIFDLEKKSKVDELKPEYIEKGKKSREPECVSLAWSADGQTLFAGYTDNK 306
Query: 568 IRVWDIPS 575
IR W + S
Sbjct: 307 IRAWGVMS 314
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 148 (57.2 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 33/127 (25%), Positives = 55/127 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH + + + V SG D +K+W ++ G R + R +
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCV-FRYRGHSQAVRCLRFSPDGKW 161
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA DD TV + D+ ++ + GH G + +F P+ L + S D TIR WD+
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF 221
Query: 577 QLIDCFQ 583
Q++ C +
Sbjct: 222 QVVSCIE 228
Score = 129 (50.5 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 52/221 (23%), Positives = 93/221 (42%)
Query: 109 GHTSPVHLILPFGPH--LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVN 166
GHTSPV + P +++ + +++VWD++A + L MG + N C
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL---------MGHKANICS- 110
Query: 167 VLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT 226
L+ P + + G + I L +I + + V L F DG + S ++
Sbjct: 111 -LDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK-WLASAADD 168
Query: 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRL 286
+ +W+L ++ ++ H V F NE LL + S D T++ W +K ++
Sbjct: 169 HTVKLWDLTAGKMMSEFP-GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF----QV 223
Query: 287 LRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
+ EG P I F N L + +LR++ + E
Sbjct: 224 VSCIEGEPGPVRSILF--NPDGCCLYSGCQDSLRVYGWEPE 262
Score = 123 (48.4 bits), Expect = 0.00040, P = 0.00040
Identities = 30/127 (23%), Positives = 59/127 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESS 515
GH V V + +++++G +++VW + K LR++ I H
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDL-EAAKI-LRTLMGHKANICSLDFHPYGE 118
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+A D + + DI + + GH + FSPD +WL +A+ D T+++WD+ +
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 576 SQLIDCF 582
+++ F
Sbjct: 179 GKMMSEF 185
Score = 49 (22.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 14/66 (21%), Positives = 33/66 (50%)
Query: 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS-TLR 320
LL T D + LW +K + + GH++P ++ N+ + ++ A S ++R
Sbjct: 35 LLATGGDDCRVNLWSINKPN----CIMSLTGHTSPVESVRL--NTPEELIVAGSQSGSIR 88
Query: 321 IFNTKS 326
+++ ++
Sbjct: 89 VWDLEA 94
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 143 (55.4 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 43/151 (28%), Positives = 76/151 (50%)
Query: 439 FNIQSGAHRGSY-GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF-KQTGKPPL 496
++I +G + + GH N V V+G S Q++ SG +D+T+K+W K+ L
Sbjct: 125 WDIATGQRQRRFKGHGN---FVNSVQG--SRRGQQLLCSGSDDRTIKIWDARKKHAAHTL 179
Query: 497 RSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDS 556
S + F T ++ +++ +D+ V I DI ++ L GH +T SP+
Sbjct: 180 ESPFQVTAVCFGDTGEQ--VISGGIDN-EVKIWDIRKQAVLHHLRGHSDTITGMSLSPEG 236
Query: 557 RWLITASMDCTIRVWDI----PSSQLIDCFQ 583
+++T +MD T+RVWD+ P + + FQ
Sbjct: 237 DFILTNAMDNTLRVWDVRPYAPGERCVKVFQ 267
Score = 122 (48.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 56/244 (22%), Positives = 101/244 (41%)
Query: 94 IYAWR--RGIDIVGTYKGHTSPV---HLILPFGPHLISVDEESNVKVWDIKAEETYLELS 148
IY W+ + V GH+ V H P G H+ + + + WDI +
Sbjct: 79 IYIWQVYEDCENVMAMSGHSGAVMEAHFT-PDGSHIFTCSTDKTLAFWDIATGQRQRRFK 137
Query: 149 -FDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPV 207
N + G R +L I + + KK H + ES + V
Sbjct: 138 GHGNFVNSVQGSRRGQ--QLLCSGSDDRTIKIWDARKKHAAHTL---ESPFQ-------V 185
Query: 208 TALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS 267
TA+ F G ++SG + +W++ + V + ++ H +TG ++T++
Sbjct: 186 TAVCFGDTGE-QVISGGIDNEVKIWDIRKQAVLHHLR-GHSDTITGMSLSPEGDFILTNA 243
Query: 268 PDNTLKLW-IFDKADGNGRLLRIREGH--SAPPNYIQF-YGNSSDNILSAAGDSTLRIF- 322
DNTL++W + A G R +++ +GH + N ++ + SD I S + D + I+
Sbjct: 244 MDNTLRVWDVRPYAPGE-RCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWD 302
Query: 323 -NTK 325
NT+
Sbjct: 303 VNTR 306
Score = 97 (39.2 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 34/129 (26%), Positives = 54/129 (41%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH + G+ +++ D T++VW + P R +K+ G H
Sbjct: 222 GHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYA-PGERCVKVFQG----HQHNFEKN 276
Query: 517 LAVCL-----DDFT-------VNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
L C D T V I D++T I+ KL GH G + DFSP +++ S
Sbjct: 277 LLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSS 336
Query: 565 DCTIRVWDI 573
D T+ + +I
Sbjct: 337 DKTLYLGEI 345
Score = 95 (38.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 32/124 (25%), Positives = 55/124 (44%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKA-HRKVVTGAHFLYNEPLL 263
G + F +G ++ SG + + +W + + EN + + H V AHF + +
Sbjct: 56 GEIFTAEFHPEGELLLSSGFDR-QIYIWQVYE-DCENVMAMSGHSGAVMEAHFTPDGSHI 113
Query: 264 VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
T S D TL W D A G R R + GH N +Q + S + D T++I++
Sbjct: 114 FTCSTDKTLAFW--DIATGQ-RQRRFK-GHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWD 169
Query: 324 TKSE 327
+ +
Sbjct: 170 ARKK 173
Score = 73 (30.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 31/129 (24%), Positives = 53/129 (41%)
Query: 462 VRGVVSDNLNQIVISGGNDQTVKVWHF-KQTGKPPLRSIKLDNGISFFRTHQESSMLAVC 520
V V + + VISGG D VK+W KQ LR + I+ E +
Sbjct: 185 VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHS--DTITGMSLSPEGDFILTN 242
Query: 521 LDDFTVNIIDI------DTCTIIRKLSGHMGQ----LTDADFSPDSRWLITASMDCTIRV 570
D T+ + D+ + C ++ GH L +SP S + + S D + +
Sbjct: 243 AMDNTLRVWDVRPYAPGERC--VKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYI 300
Query: 571 WDIPSSQLI 579
WD+ + +++
Sbjct: 301 WDVNTRRIL 309
Score = 53 (23.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTV 483
PGH G V V +++SG +D+T+
Sbjct: 313 PGHNGSVNAVDFSPKEPLILSGSSDKTL 340
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 105 (42.0 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 62/283 (21%), Positives = 115/283 (40%)
Query: 64 KLLSVSPQHEDDITC--LSSDFFHIYT-SANNIIYAWRRGI-DIVGTYKGHTSPVHL--I 117
KLL + HED++ C S+D I T S + + W ++V +Y H+ V+
Sbjct: 649 KLLEIKA-HEDEVLCCAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHF 707
Query: 118 LPFGPHLISVDEESN--VKVWDIKAEETYLEL-----SFDNDTFKIMGKRWNSCVNVLEP 170
HL+ S+ +K+WD+ +E + S + F K SC +
Sbjct: 708 TNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASC-SADGT 766
Query: 171 SPVVDIIGVGLSNKKI-ILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHL 229
+ D+ K I + L E E ++ V S+ DG ++V+ N +
Sbjct: 767 LKLWDVKSAN-ERKSINVKQFFLNSEESQEDMEVM--VKCCSWSADGASLVVAAKNK--V 821
Query: 230 TVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI 289
++N+ + +I H + F + L V + ++LW D L++
Sbjct: 822 LLFNIHTGGLLAEIHTGHHSTIQYCDFSPSNHLAVVALSQYCVELWNMDSC------LKV 875
Query: 290 RE--GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
+ GH + + F + S + L+++ D T+R++ TK N
Sbjct: 876 ADCRGHLSWVHCAMFSPDGS-SFLTSSDDETIRLWETKKVCKN 917
Score = 104 (41.7 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 37/157 (23%), Positives = 69/157 (43%)
Query: 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN 241
++K + + T E L+E V +F D + + S + +WN ++
Sbjct: 635 ADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDR-FIATCSVDKKVKIWNSVTGELVQ 693
Query: 242 QIKKAHRKVVTGAHFLYNEP--LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNY 299
+ H + V HF N LL T S D LKLW ++ + + GH+ ++
Sbjct: 694 SYDE-HSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMF----GHTNSVSH 748
Query: 300 IQFYGNSSDNIL-SAAGDSTLRIFNTKSETSNKNLGI 335
+F + D +L S + D TL++++ KS K++ +
Sbjct: 749 CRF--SPDDKLLASCSADGTLKLWDVKSANERKSINV 783
Score = 98 (39.6 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 29/114 (25%), Positives = 52/114 (45%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSML 517
H VR + + VIS +D ++VW+++ L++ + + FR + S +L
Sbjct: 1002 HKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETVSLQAHQ--ETVKDFRLLKNSRLL 1059
Query: 518 AVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ D TV + +I T I + H + D SPD+ + S D T ++W
Sbjct: 1060 SWSFDG-TVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1112
Score = 97 (39.2 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 514 SSMLAV-CLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
S+ LAV L + V + ++D+C + GH+ + A FSPD +T+S D TIR+W+
Sbjct: 851 SNHLAVVALSQYCVELWNMDSCLKVADCRGHLSWVHCAMFSPDGSSFLTSSDDETIRLWE 910
Score = 96 (38.9 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
N ++S D TVKVW+ TG+ + + + +++ + D T I
Sbjct: 1055 NSRLLSWSFDGTVKVWNII-TGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWS 1113
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
D + + +L GH G + + FS DS L T + IR+W++ + +L+
Sbjct: 1114 FDLLSPLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELL 1162
Score = 86 (35.3 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 27/105 (25%), Positives = 47/105 (44%)
Query: 171 SPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLT 230
SP + + G + I + +L + + V + F TDG + +S S+ +
Sbjct: 970 SPHLQYLAFGSDDGAIQVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNV-ISSSDDSAIQ 1028
Query: 231 VWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
VWN + + + +AH++ V L N LL S D T+K+W
Sbjct: 1029 VWNWQSEETVSL--QAHQETVKDFRLLKNSRLLSWSF-DGTVKVW 1070
Score = 83 (34.3 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 480 DQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNIIDID------ 532
D+T K+W F PL ++ G + +S++LA D+ + I ++
Sbjct: 1106 DKTAKIWSFDLLS--PLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLH 1163
Query: 533 TCTIIRKLSG---HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
+C + G H G +TD FSPD + L++A ++ W++ S + I F
Sbjct: 1164 SCAPVLVEGGAATHGGWVTDLRFSPDGKMLVSAGG--YLKWWNVDSGKSIQTF 1214
Score = 80 (33.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 34/126 (26%), Positives = 57/126 (45%)
Query: 212 FRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271
F DG + G++ L V+ E + +IK AH V F ++ + T S D
Sbjct: 623 FSEDGQRIASCGADKT-LQVFKAETGEKLLEIK-AHEDEVLCCAFSADDRFIATCSVDKK 680
Query: 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDST--LRIFN-TKSET 328
+K+W G L++ + HS N F N+S+++L A G S L++++ + E
Sbjct: 681 VKIW----NSVTGELVQSYDEHSEQVNCCHFT-NNSNHLLLATGSSDYFLKLWDLNQKEC 735
Query: 329 SNKNLG 334
N G
Sbjct: 736 RNTMFG 741
Score = 67 (28.6 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 14/63 (22%), Positives = 32/63 (50%)
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA DD + ++++ + + + H + F+ D + +I++S D I+VW+ S
Sbjct: 976 LAFGSDDGAIQVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSE 1035
Query: 577 QLI 579
+ +
Sbjct: 1036 ETV 1038
Score = 66 (28.3 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 28/127 (22%), Positives = 58/127 (45%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH+ V + ++ +D+T+++W K+ K +I L+ I QE+ +
Sbjct: 880 GHLSWVHCAMFSPDGSSFLTSSDDETIRLWETKKVCKNS--AIVLNKKIDV--VFQENEV 935
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDAD-----FSPDSRWLITASMDCTIRVW 571
+ + +D+ I +I +G + LT+A SP ++L S D I+V
Sbjct: 936 MVLAVDN-------IRRLQVINGKTGQIDYLTEAQVSCCCLSPHLQYLAFGSDDGAIQVL 988
Query: 572 DIPSSQL 578
++ +++L
Sbjct: 989 ELLNNRL 995
Score = 48 (22.0 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 62 HFKLLSVSPQHEDDITCLSSDFFHIYTSAN--NIIYAWRRGIDIVGTYKGHTSPVHLILP 119
H +L ++SP ED + + +H+ SAN + A +D + P HLI
Sbjct: 467 HHRLHTLSPDQEDCMYWYNFLAYHM-ASANMHKELCALMFSLDWIKAKTELVGPAHLIHE 525
Query: 120 FGPHLISVDEE 130
F + +DE+
Sbjct: 526 FVEYRHILDEK 536
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 146 (56.5 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 39/137 (28%), Positives = 68/137 (49%)
Query: 444 GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN 503
GA+ G + GH G+ V + +++++SG +D+T+KVW TGK L+++K +
Sbjct: 100 GAYDGKF-EKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELS-TGKS-LKTLKGHS 156
Query: 504 GISFFRTHQESSMLAVCLD-DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITA 562
F S L V D +V I D+ T ++ L H ++ F+ D ++++
Sbjct: 157 NYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 216
Query: 563 SMDCTIRVWDIPSSQLI 579
S D R+WD S Q +
Sbjct: 217 SYDGLCRIWDTASGQCL 233
Score = 128 (50.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 50/207 (24%), Positives = 90/207 (43%)
Query: 124 LISVDEESNVKVWDIKAEETYLELS-FDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS 182
L+S ++ +KVW++ ++ L N F C N +P ++I G
Sbjct: 129 LVSGSDDKTLKVWELSTGKSLKTLKGHSNYVF---------CCNF---NPQSNLIVSGSF 176
Query: 183 NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242
++ + + ++ T + L PV+A+ F DG ++VS S G +W+ Q
Sbjct: 177 DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKT 235
Query: 243 IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI-- 300
+ V+ F N ++ ++ DNTLKLW + K G+ L+ GH I
Sbjct: 236 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK----GKCLKTYTGHKNEKYCIFA 291
Query: 301 QFYGNSSDNILSAAGDSTLRIFNTKSE 327
F I+S + D+ + I+N +S+
Sbjct: 292 NFSVTGGKWIVSGSEDNMVYIWNLQSK 318
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 32/125 (25%), Positives = 59/125 (47%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK--PPLRSIKLDNGISFFRTHQES 514
GH V V + + S D+ +K+W GK + KL GIS +S
Sbjct: 70 GHTKAVSAVKFSPNGEWLASSSADKLIKIWG-AYDGKFEKTISGHKL--GISDVAWSSDS 126
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
+L DD T+ + ++ T ++ L GH + +F+P S +++ S D ++R+WD+
Sbjct: 127 RLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 186
Query: 575 SSQLI 579
+ + +
Sbjct: 187 TGKCL 191
Score = 103 (41.3 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
++VSGS+ L VW L + +K H V +F L+V+ S D ++++W D
Sbjct: 128 LLVSGSDDKTLKVWELSTGKSLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIW--D 184
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
G+ L+ HS P + + F + S I+S++ D RI++T S K L
Sbjct: 185 VR--TGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTL 236
Score = 97 (39.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 23/114 (20%), Positives = 60/114 (52%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNII 529
+ +++SG D++V++W + TGK L+++ + +S +++ S++ D I
Sbjct: 168 SNLIVSGSFDESVRIWDVR-TGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 225
Query: 530 DIDTCTIIRKL-SGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
D + ++ L ++ FSP+ ++++ A++D T+++WD + + +
Sbjct: 226 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 279
Score = 95 (38.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 30/133 (22%), Positives = 60/133 (45%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQES 514
P H V V + +++S D ++W +G+ I DN +SF +
Sbjct: 195 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSFVKFSPNG 253
Query: 515 S-MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ--LTDADFS-PDSRWLITASMDCTIRV 570
+LA LD+ T+ + D ++ +GH + A+FS +W+++ S D + +
Sbjct: 254 KYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYI 312
Query: 571 WDIPSSQLIDCFQ 583
W++ S +++ Q
Sbjct: 313 WNLQSKEVVQKLQ 325
Score = 76 (31.8 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 23/88 (26%), Positives = 41/88 (46%)
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLW-IFDKADGNGRLLRIREGHSAPPNYIQFYGN 305
H K V+ F N L +SS D +K+W +D G+ + GH + + + +
Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKLGISDVA-WSS 124
Query: 306 SSDNILSAAGDSTLRIFNTKSETSNKNL 333
S ++S + D TL+++ + S K L
Sbjct: 125 DSRLLVSGSDDKTLKVWELSTGKSLKTL 152
Score = 56 (24.8 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 29/124 (23%), Positives = 53/124 (42%)
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK--PPLRSIKLDNGISFFRT 510
DN P V V+ S N + +++ D T+K+W + + GK K + F
Sbjct: 240 DNPP--VSFVK--FSPN-GKYILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANF 293
Query: 511 HQESSMLAVC-LDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM--DCT 567
V +D V I ++ + +++KL GH + P + +A++ D T
Sbjct: 294 SVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKT 353
Query: 568 IRVW 571
I++W
Sbjct: 354 IKLW 357
>ASPGD|ASPL0000032070 [details] [associations]
symbol:fbx23 species:162425 "Emericella nidulans"
[GO:0071482 "cellular response to light stimulus" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001305 KO:K03362 EMBL:AACD01000096
OrthoDB:EOG4HQHSG RefSeq:XP_663197.1 ProteinModelPortal:Q5B1I7
EnsemblFungi:CADANIAT00003484 GeneID:2871879 KEGG:ani:AN5593.2
HOGENOM:HOG000191354 OMA:TNFQLPH Uniprot:Q5B1I7
Length = 854
Score = 137 (53.3 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 60/228 (26%), Positives = 99/228 (43%)
Query: 108 KGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNV 167
+ H V+ I G L+S + V+VWD+ + + T ++ ++N
Sbjct: 324 EAHQECVYAIQFIGKWLVSGSRDKTVRVWDLNTKRLW-HRPLIGHTKSVLCLQFN----- 377
Query: 168 LEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTG 227
PSP DII G S+K +I+ T E + E + L+ R D +V+ S
Sbjct: 378 --PSPSEDIIISGSSDKNVIVWRFSTGEKIHEIAPAHDD-SVLNLRFDHR-YLVTCSKDK 433
Query: 228 HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS-PDNTLKLWIFD---KADGN 283
+ +WN R+ + K + V G+ Y ++ TS P L+ I +
Sbjct: 434 LIKIWN---RKNLSPADKDYPSVHQGSGVSYPSYIVDTSVIPSPVLEAEIAKNHIRTLEP 490
Query: 284 GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNK 331
LL GH+A N IQ +G D I+SA+GD ++I+N ++ K
Sbjct: 491 FSLLMTLVGHTAAVNAIQIHG---DEIVSASGDRLIKIWNIRNGACKK 535
Score = 66 (28.3 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 439 FNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
+NI++GA + ++ GH G+ V DN Q V+SG ND T++++
Sbjct: 526 WNIRNGACKKTF-----VGHEKGIACVQFDN--QRVVSGSNDNTIRIF 566
Score = 48 (22.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 523 DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
D + I +I + GH + F D++ +++ S D TIR++D S + C
Sbjct: 520 DRLIKIWNIRNGACKKTFVGHEKGIACVQF--DNQRVVSGSNDNTIRIFDHASRAEVACL 577
Query: 583 Q 583
+
Sbjct: 578 R 578
Score = 39 (18.8 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 555 DSRWLITASMDCTIRVWD 572
D+R +I AS D I WD
Sbjct: 819 DARKIICASQDPRIVGWD 836
Score = 39 (18.8 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 5/20 (25%), Positives = 13/20 (65%)
Query: 474 VISGGNDQTVKVWHFKQTGK 493
++SG D+++ +W + G+
Sbjct: 666 IVSGSYDESIIIWKKDRKGQ 685
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 108 (43.1 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 33/127 (25%), Positives = 65/127 (51%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL------Y 258
G VT+LS + P +++SGS + +WNL V + A R++ +HF+ +
Sbjct: 16 GWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGV--AQRRLTGHSHFVSDCALSF 73
Query: 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGD 316
+ +++S D T++LW +K + + + GH++ + S DN ++S + D
Sbjct: 74 DSHYALSASWDKTIRLWDLEKGECTHQFV----GHTSDVLSVSI---SPDNRQVVSGSRD 126
Query: 317 STLRIFN 323
T++I+N
Sbjct: 127 KTIKIWN 133
Score = 84 (34.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 44/175 (25%), Positives = 79/175 (45%)
Query: 161 WNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQT--WGP---VT--ALSFR 213
W + ++ +P DI+ G +K IIL N++ D+ Q G V+ ALSF
Sbjct: 17 WVTSLSTAPENP--DILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFD 74
Query: 214 TDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLK 273
+ +S S + +W+LE + +Q H V + +V+ S D T+K
Sbjct: 75 SH---YALSASWDKTIRLWDLEKGECTHQFV-GHTSDVLSVSISPDNRQVVSGSRDKTIK 130
Query: 274 LWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNI--LSAAGDSTLRIFNTKS 326
+W GN + GHS + ++F N DN+ +SA D +++++ ++
Sbjct: 131 IW---NIIGNCKYTITDGGHSDWVSCVRFSPNP-DNLTFVSAGWDKAVKVWDLET 181
Score = 81 (33.6 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 31/115 (26%), Positives = 54/115 (46%)
Query: 468 DNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN-G-ISFFRTHQESSMLAVCLDDFT 525
DNL +S G D+ VKVW + LR+ + G +S + S+ A D T
Sbjct: 161 DNLT--FVSAGWDKAVKVWDLETFS---LRTSHYGHTGYVSAVTISPDGSLCASGGRDGT 215
Query: 526 VNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLID 580
+ + D++ T + L + FSP+ WL A+ +IR++D+ + + +D
Sbjct: 216 LMLWDLNESTHLYSLEAK-ANINALVFSPNRYWLCAAT-GSSIRIFDLETQEKVD 268
Score = 72 (30.4 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 29/126 (23%), Positives = 50/126 (39%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH G V V + SGG D T+ +W ++ L S++ I+
Sbjct: 190 GHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTH--LYSLEAKANINALVFSPNRYW 247
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLS-GHMG--------QLTDADFSPDSRWLITASMDCT 567
L ++ I D++T + +L+ +G + +SPD + L + D
Sbjct: 248 LCAATGS-SIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNL 306
Query: 568 IRVWDI 573
IRVW +
Sbjct: 307 IRVWQV 312
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 153 (58.9 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 40/121 (33%), Positives = 61/121 (50%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS--IKLDNGISFFRT---HQ 512
H G VRG+ + +SGG+D +KVW++K LR L + + RT H
Sbjct: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK------LRRCLFTLLGHLDYIRTTFFHH 103
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
E + DD T+ I + + T + L+GH + A F P +++AS+D T+RVWD
Sbjct: 104 EYPWILSASDDQTIRIWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 163
Query: 573 I 573
I
Sbjct: 164 I 164
Score = 112 (44.5 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 34/129 (26%), Positives = 62/129 (48%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264
GPV + F P+ VSG + + VWN + R+ + H + F + P ++
Sbjct: 52 GPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYKLRRCLFTLL-GHLDYIRTTFFHHEYPWIL 109
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
++S D T+++W + + + GH+ QF+ S D ++SA+ D T+R+++
Sbjct: 110 SASDDQTIRIWNWQSRT----CVCVLTGHNHYVMCAQFHP-SEDLVVSASLDQTVRVWDI 164
Query: 325 KSETSNKNL 333
S KNL
Sbjct: 165 -SGLRKKNL 172
Score = 99 (39.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
V LSF P ++ S N G + +W+ + ++ + H V G F +PL V+
Sbjct: 12 VKGLSFHPKRPWILASLHN-GVIQLWDYRMCTLIDKFDE-HDGPVRGIDFHKQQPLFVSG 69
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQ--FYGNSSDNILSAAGDSTLRIFNT 324
D +K+W + R L GH +YI+ F+ + ILSA+ D T+RI+N
Sbjct: 70 GDDYKIKVWNYKLR----RCLFTLLGHL---DYIRTTFFHHEYPWILSASDDQTIRIWNW 122
Query: 325 KSET 328
+S T
Sbjct: 123 QSRT 126
Score = 74 (31.1 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 32/131 (24%), Positives = 55/131 (41%)
Query: 456 PGHVGG-VRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQES 514
PG V VRG+ + + + G +D VK H + G D G+++ H
Sbjct: 174 PGAVDTEVRGI-----SGVDLFGASDAVVK--HVLEQGH--------DRGVNWAAFHPSM 218
Query: 515 SMLAVCLDDFTVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ DD V I ++ + GH ++ A F P +++ S D +IRVWD
Sbjct: 219 PLIVSGADDRQVKIWRMNESKAWELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWD 278
Query: 573 IPSSQLIDCFQ 583
+ + F+
Sbjct: 279 MSKRTGVQTFR 289
Score = 69 (29.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/93 (21%), Positives = 39/93 (41%)
Query: 444 GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD- 502
GA H + GH GV +++SG +D+ VK+W ++ L + +
Sbjct: 191 GASDAVVKHVLEQGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAWELDTCRGHY 250
Query: 503 NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCT 535
N +S H ++ +D ++ + D+ T
Sbjct: 251 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRT 283
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 148 (57.2 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 39/120 (32%), Positives = 59/120 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR---THQE 513
GH+G VR + + NQ ++G D+T+K+W +GK L+ + L IS R
Sbjct: 201 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLA-SGK--LK-LSLTGHISTVRGVIVSTR 256
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
S L C +D V D++ +IR GH+ + D P L+T S D T R+WD+
Sbjct: 257 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 316
Score = 130 (50.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 34/118 (28%), Positives = 50/118 (42%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH+ VRGV+ + + S G D+ VK W + +R + + H
Sbjct: 243 GHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN--KVIRHYHGHLSAVYGLDLHPTID 300
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+L C D T I D+ T + LSGH + +IT S D TIR+WD+
Sbjct: 301 VLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 358
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 148 (57.2 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 39/120 (32%), Positives = 59/120 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR---THQE 513
GH+G VR + + NQ ++G D+T+K+W +GK L+ + L IS R
Sbjct: 201 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLA-SGK--LK-LSLTGHISTVRGVIVSTR 256
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
S L C +D V D++ +IR GH+ + D P L+T S D T R+WD+
Sbjct: 257 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDV 316
Score = 130 (50.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 34/118 (28%), Positives = 50/118 (42%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH+ VRGV+ + + S G D+ VK W + +R + + H
Sbjct: 243 GHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN--KVIRHYHGHLSAVYGLDLHPTLD 300
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+L C D T I D+ T + LSGH + +IT S D TIR+WD+
Sbjct: 301 VLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 358
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 148 (57.2 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 39/120 (32%), Positives = 59/120 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR---THQE 513
GH+G VR + + NQ ++G D+T+K+W +GK L+ + L IS R
Sbjct: 202 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLA-SGK--LK-LSLTGHISTVRGVIVSTR 257
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
S L C +D V D++ +IR GH+ + D P L+T S D T R+WD+
Sbjct: 258 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 317
Score = 130 (50.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 34/118 (28%), Positives = 50/118 (42%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH+ VRGV+ + + S G D+ VK W + +R + + H
Sbjct: 244 GHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN--KVIRHYHGHLSAVYGLDLHPTID 301
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+L C D T I D+ T + LSGH + +IT S D TIR+WD+
Sbjct: 302 VLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 359
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 148 (57.2 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 39/120 (32%), Positives = 59/120 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR---THQE 513
GH+G VR + + NQ ++G D+T+K+W +GK L+ + L IS R
Sbjct: 202 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLA-SGK--LK-LSLTGHISTVRGVIVSTR 257
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
S L C +D V D++ +IR GH+ + D P L+T S D T R+WD+
Sbjct: 258 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 317
Score = 130 (50.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 34/118 (28%), Positives = 50/118 (42%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH+ VRGV+ + + S G D+ VK W + +R + + H
Sbjct: 244 GHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN--KVIRHYHGHLSAVYGLDLHPTID 301
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+L C D T I D+ T + LSGH + +IT S D TIR+WD+
Sbjct: 302 VLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 359
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 148 (57.2 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 39/120 (32%), Positives = 59/120 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR---THQE 513
GH+G VR + + NQ ++G D+T+K+W +GK L+ + L IS R
Sbjct: 203 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLA-SGK--LK-LSLTGHISTVRGVIVSTR 258
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
S L C +D V D++ +IR GH+ + D P L+T S D T R+WD+
Sbjct: 259 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 318
Score = 130 (50.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 34/118 (28%), Positives = 50/118 (42%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH+ VRGV+ + + S G D+ VK W + +R + + H
Sbjct: 245 GHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN--KVIRHYHGHLSAVYGLDLHPTID 302
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+L C D T I D+ T + LSGH + +IT S D TIR+WD+
Sbjct: 303 VLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 360
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 148 (57.2 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 39/120 (32%), Positives = 59/120 (49%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR---THQE 513
GH+G VR + + NQ ++G D+T+K+W +GK L+ + L IS R
Sbjct: 204 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLA-SGK--LK-LSLTGHISTVRGVIVSAR 259
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
S L C +D V D++ +IR GH+ + D P L+T S D T R+WD+
Sbjct: 260 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 319
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 33/118 (27%), Positives = 50/118 (42%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH+ VRGV+ + + S G D+ VK W + +R + + H
Sbjct: 246 GHISTVRGVIVSARSPYLFSCGEDKQVKCWDLEYN--KVIRHYHGHLSAVYGLDLHPTID 303
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+L C D T I D+ T + LSGH + ++T S D TIR+WD+
Sbjct: 304 VLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDL 361
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 152 (58.6 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS--IKLDNGISFFRT---HQ 512
H G VRG+ + +SGG+D +KVW++K LR L + + RT H
Sbjct: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK------LRRCLFTLLGHLDYIRTTFFHH 103
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
E + DD T+ + + + T + L+GH + A F P +++AS+D T+RVWD
Sbjct: 104 EYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 163
Query: 573 I 573
I
Sbjct: 164 I 164
Score = 111 (44.1 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 34/129 (26%), Positives = 62/129 (48%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264
GPV + F P+ VSG + + VWN + R+ + H + F + P ++
Sbjct: 52 GPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYKLRRCLFTLL-GHLDYIRTTFFHHEYPWIL 109
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
++S D T+++W + + + GH+ QF+ S D ++SA+ D T+R+++
Sbjct: 110 SASDDQTIRVWNWQSRT----CVCVLTGHNHYVMCAQFHP-SEDLVVSASLDQTVRVWDI 164
Query: 325 KSETSNKNL 333
S KNL
Sbjct: 165 -SGLRKKNL 172
Score = 73 (30.8 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 20/84 (23%), Positives = 37/84 (44%)
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWL 559
D G+++ H ++ DD V I ++ + GH ++ A F P +
Sbjct: 205 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 264
Query: 560 ITASMDCTIRVWDIPSSQLIDCFQ 583
++ S D +IRVWD+ + F+
Sbjct: 265 LSNSEDKSIRVWDMSKRTGVQTFR 288
Score = 62 (26.9 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 16/80 (20%), Positives = 35/80 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH GV +++SG +D+ VK+W ++ + + + N +S H
Sbjct: 203 GHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE 262
Query: 516 MLAVCLDDFTVNIIDIDTCT 535
++ +D ++ + D+ T
Sbjct: 263 LILSNSEDKSIRVWDMSKRT 282
Score = 60 (26.2 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF-KQTGKPPLR 497
D GH V V ++++S D++++VW K+TG R
Sbjct: 243 DTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFR 288
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 152 (58.6 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS--IKLDNGISFFRT---HQ 512
H G VRG+ + +SGG+D +KVW++K LR L + + RT H
Sbjct: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK------LRRCLFTLLGHLDYIRTTFFHH 103
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
E + DD T+ + + + T + L+GH + A F P +++AS+D T+RVWD
Sbjct: 104 EYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 163
Query: 573 I 573
I
Sbjct: 164 I 164
Score = 111 (44.1 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 34/129 (26%), Positives = 62/129 (48%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264
GPV + F P+ VSG + + VWN + R+ + H + F + P ++
Sbjct: 52 GPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYKLRRCLFTLL-GHLDYIRTTFFHHEYPWIL 109
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
++S D T+++W + + + GH+ QF+ S D ++SA+ D T+R+++
Sbjct: 110 SASDDQTIRVWNWQSRT----CVCVLTGHNHYVMCAQFHP-SEDLVVSASLDQTVRVWDI 164
Query: 325 KSETSNKNL 333
S KNL
Sbjct: 165 -SGLRKKNL 172
Score = 73 (30.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 20/84 (23%), Positives = 37/84 (44%)
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWL 559
D G+++ H ++ DD V I ++ + GH ++ A F P +
Sbjct: 205 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 264
Query: 560 ITASMDCTIRVWDIPSSQLIDCFQ 583
++ S D +IRVWD+ + F+
Sbjct: 265 LSNSEDKSIRVWDMSKRTGVQTFR 288
Score = 62 (26.9 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 16/80 (20%), Positives = 35/80 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH GV +++SG +D+ VK+W ++ + + + N +S H
Sbjct: 203 GHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE 262
Query: 516 MLAVCLDDFTVNIIDIDTCT 535
++ +D ++ + D+ T
Sbjct: 263 LILSNSEDKSIRVWDMSKRT 282
>UNIPROTKB|F1RJ54 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:FP102612 RefSeq:XP_003131801.1 UniGene:Ssc.25169
Ensembl:ENSSSCT00000019321 GeneID:100525660 KEGG:ssc:100525660
Uniprot:F1RJ54
Length = 421
Score = 146 (56.5 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 35/101 (34%), Positives = 52/101 (51%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531
I++S D+T++VW K G ++ ++ N + +SSML V + D+
Sbjct: 185 ILVSASRDKTLRVWDLKDDGNM-MKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWDM 243
Query: 532 DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
D T+IRKL GH + DFSPD L TAS D + +WD
Sbjct: 244 DKYTMIRKLEGHHHDVVACDFSPDGALLATASYDTRVYIWD 284
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 37/147 (25%), Positives = 64/147 (43%)
Query: 176 IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
++ GL+N +I + ++ T + L+ + V L+F DG ++VS S L VW+L+
Sbjct: 142 LLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLK 201
Query: 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA 295
D ++ + H+ V F + +L + + LW DK ++R EGH
Sbjct: 202 DDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWDMDKYT----MIRKLEGHHH 257
Query: 296 PPNYIQFYGNSSDNILSAAGDSTLRIF 322
F S D L A R++
Sbjct: 258 DVVACDF---SPDGALLATASYDTRVY 281
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 123 (48.4 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH V V D+ ++++SG D+TVKVWH + LR ++ + H +S
Sbjct: 380 GHSDSVLSV--DSYQKVIVSGSADKTVKVWHVESRTCYTLRGHT--EWVNCVKLHPKSFS 435
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQL 547
C DD T+ + DI T + ++ GH+GQ+
Sbjct: 436 CFSCSDDTTIRMWDIRTNSCLKVFRGHVGQV 466
Score = 73 (30.8 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW-IFDKADGNGRLLRIREGHSAPPNYIQFY 303
K H V F Y LL T S D+T+ +W +F G+L+R GHS + F
Sbjct: 299 KGHMDGVLTLQFNYR--LLFTGSYDSTIGIWDLF-----TGKLIRRLSGHSDGVKTLYF- 350
Query: 304 GNSSDNILSAAGDSTLRIFN 323
+++ + D T+R++N
Sbjct: 351 --DDRKLITGSLDKTIRVWN 368
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 110 (43.8 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 193 TDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVT 252
T E L+E V +F TD + + S + +WN + + + H + V
Sbjct: 654 TGEKLLEIKAHEDEVLCCAFSTDDR-FIATCSVDKKVKIWNSMTGGLVH-VYDEHSEQVN 711
Query: 253 GAHFLYNEP--LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNI 310
HF N LL T+S D LKLW ++ + + GH+ N+ +F + D +
Sbjct: 712 CCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMF----GHTNSVNHCRF--SPDDKL 765
Query: 311 L-SAAGDSTLRIFNTKSETSNKNLGI 335
L S + D TL++++ KS K++ +
Sbjct: 766 LASCSADGTLKLWDVKSANERKSINV 791
Score = 93 (37.8 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 27/115 (23%), Positives = 52/115 (45%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH VR + + + +IS +D +++VW+++ L++ + + F+ + S +
Sbjct: 966 GHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVFLQAHQ--ETVKDFKLLKNSKL 1023
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
L+ D I I T I + H + D SPD+ + S D T ++W
Sbjct: 1024 LSWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1078
Score = 92 (37.4 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 57/242 (23%), Positives = 97/242 (40%)
Query: 64 KLLSVSPQHEDDITC--LSSDFFHIYT-SANNIIYAWRRGID-IVGTYKGHTSPVHLI-L 118
KLL + HED++ C S+D I T S + + W +V Y H+ V+
Sbjct: 657 KLLEIKA-HEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHF 715
Query: 119 PFGPH---LISVDEESNVKVWDIKAEETYLEL-----SFDNDTFKIMGKRWNSCVNVLEP 170
H L + + +K+WD+ +E + S ++ F K SC +
Sbjct: 716 TNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASC-SADGT 774
Query: 171 SPVVDIIGVGLSNKKI-ILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHL 229
+ D+ K I + L E E ++ V S+ DG +MV+ N +
Sbjct: 775 LKLWDVKSAN-ERKSINVKQFFLNSEEPQEDMEVI--VKCCSWSADGTRIMVAAKNK--I 829
Query: 230 TVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI 289
+WN+ D ++ + H V F + +TSS D T++LW K N ++
Sbjct: 830 FLWNM-DSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLK 888
Query: 290 RE 291
+E
Sbjct: 889 QE 890
Score = 79 (32.9 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 31/115 (26%), Positives = 53/115 (46%)
Query: 480 DQTVKVWHFKQTGKPPLRSIKLDNGI---SFFRTHQESSMLAVCLDDFTVNIIDIDT--- 533
D+T K+W F+ PL ++ G S F +S++LA D+ + I ++
Sbjct: 1072 DKTAKIWSFELLS--PLHELRGHKGCVRCSVFSV--DSTLLATGDDNGEIRIWNVSNGEL 1127
Query: 534 ---CTIIRKLSG---HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
C I G H G +TD FSPDS+ L++A ++ W++ + + F
Sbjct: 1128 LHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAGG--YLKWWNVVTGESSQTF 1180
Score = 79 (32.9 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 26/110 (23%), Positives = 50/110 (45%)
Query: 471 NQIVISGGNDQTVK-VWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNII 529
N ++S D TVK +W TG+ + + + +++ + D T I
Sbjct: 1020 NSKLLSWSFDGTVKKIWSII-TGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1078
Query: 530 DIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ + + +L GH G + + FS DS L T + IR+W++ + +L+
Sbjct: 1079 SFELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGELL 1128
Score = 74 (31.1 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 522 DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+D V I+++ I + GH + F+ D + LI++S D +I+VW+ S + +
Sbjct: 946 EDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYV 1003
Score = 71 (30.1 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
N R+ + R GH +IQF + ++S++ DS+++++N +SE
Sbjct: 957 NNRIFQSRIGHKKTVRHIQFTDDGK-TLISSSDDSSIQVWNWQSE 1000
Score = 62 (26.9 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 22/123 (17%), Positives = 57/123 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH+ V V+ ++ +DQT+++W K+ K +K + + F QE+ +
Sbjct: 845 GHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLKQEIDVVF----QENEV 900
Query: 517 LAVCLDDFT-VNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+ + +D+ + +I+ T I + Q++ SP +++ D + + ++ +
Sbjct: 901 MVLAVDNIKRLQLINGKTGQIDYLIEA---QVSCCCLSPHLQYIAFGGEDGAVEILELLN 957
Query: 576 SQL 578
+++
Sbjct: 958 NRI 960
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 152 (58.6 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS--IKLDNGISFFRT---HQ 512
H G VRG+ + +SGG+D +KVW++K LR L + + RT H
Sbjct: 40 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK------LRRCLFTLLGHLDYIRTTFFHH 93
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
E + DD T+ + + + T + L+GH + A F P +++AS+D T+RVWD
Sbjct: 94 EYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 153
Query: 573 I 573
I
Sbjct: 154 I 154
Score = 111 (44.1 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 34/129 (26%), Positives = 62/129 (48%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264
GPV + F P+ VSG + + VWN + R+ + H + F + P ++
Sbjct: 42 GPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYKLRRCLFTLL-GHLDYIRTTFFHHEYPWIL 99
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
++S D T+++W + + + GH+ QF+ S D ++SA+ D T+R+++
Sbjct: 100 SASDDQTIRVWNWQSRT----CVCVLTGHNHYVMCAQFHP-SEDLVVSASLDQTVRVWDI 154
Query: 325 KSETSNKNL 333
S KNL
Sbjct: 155 -SGLRKKNL 162
Score = 73 (30.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 20/84 (23%), Positives = 37/84 (44%)
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWL 559
D G+++ H ++ DD V I ++ + GH ++ A F P +
Sbjct: 195 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 254
Query: 560 ITASMDCTIRVWDIPSSQLIDCFQ 583
++ S D +IRVWD+ + F+
Sbjct: 255 LSNSEDKSIRVWDMSKRTGVQTFR 278
Score = 62 (26.9 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 16/80 (20%), Positives = 35/80 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH GV +++SG +D+ VK+W ++ + + + N +S H
Sbjct: 193 GHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE 252
Query: 516 MLAVCLDDFTVNIIDIDTCT 535
++ +D ++ + D+ T
Sbjct: 253 LILSNSEDKSIRVWDMSKRT 272
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 152 (58.6 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS--IKLDNGISFFRT---HQ 512
H G VRG+ + +SGG+D +KVW++K LR L + + RT H
Sbjct: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK------LRRCLFTLLGHLDYIRTTFFHH 103
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
E + DD T+ + + + T + L+GH + A F P +++AS+D T+RVWD
Sbjct: 104 EYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 163
Query: 573 I 573
I
Sbjct: 164 I 164
Score = 111 (44.1 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 34/129 (26%), Positives = 62/129 (48%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264
GPV + F P+ VSG + + VWN + R+ + H + F + P ++
Sbjct: 52 GPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYKLRRCLFTLL-GHLDYIRTTFFHHEYPWIL 109
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
++S D T+++W + + + GH+ QF+ S D ++SA+ D T+R+++
Sbjct: 110 SASDDQTIRVWNWQSRT----CVCVLTGHNHYVMCAQFHP-SEDLVVSASLDQTVRVWDI 164
Query: 325 KSETSNKNL 333
S KNL
Sbjct: 165 -SGLRKKNL 172
Score = 73 (30.8 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 20/84 (23%), Positives = 37/84 (44%)
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWL 559
D G+++ H ++ DD V I ++ + GH ++ A F P +
Sbjct: 205 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 264
Query: 560 ITASMDCTIRVWDIPSSQLIDCFQ 583
++ S D +IRVWD+ + F+
Sbjct: 265 LSNSEDKSIRVWDMSKRTGVQTFR 288
Score = 62 (26.9 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 16/80 (20%), Positives = 35/80 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH GV +++SG +D+ VK+W ++ + + + N +S H
Sbjct: 203 GHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE 262
Query: 516 MLAVCLDDFTVNIIDIDTCT 535
++ +D ++ + D+ T
Sbjct: 263 LILSNSEDKSIRVWDMSKRT 282
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 152 (58.6 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS--IKLDNGISFFRT---HQ 512
H G VRG+ + +SGG+D +KVW++K LR L + + RT H
Sbjct: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK------LRRCLFTLLGHLDYIRTTFFHH 103
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
E + DD T+ + + + T + L+GH + A F P +++AS+D T+RVWD
Sbjct: 104 EYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 163
Query: 573 I 573
I
Sbjct: 164 I 164
Score = 111 (44.1 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 34/129 (26%), Positives = 62/129 (48%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264
GPV + F P+ VSG + + VWN + R+ + H + F + P ++
Sbjct: 52 GPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYKLRRCLFTLL-GHLDYIRTTFFHHEYPWIL 109
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
++S D T+++W + + + GH+ QF+ S D ++SA+ D T+R+++
Sbjct: 110 SASDDQTIRVWNWQSRT----CVCVLTGHNHYVMCAQFHP-SEDLVVSASLDQTVRVWDI 164
Query: 325 KSETSNKNL 333
S KNL
Sbjct: 165 -SGLRKKNL 172
Score = 73 (30.8 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 20/84 (23%), Positives = 37/84 (44%)
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWL 559
D G+++ H ++ DD V I ++ + GH ++ A F P +
Sbjct: 205 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 264
Query: 560 ITASMDCTIRVWDIPSSQLIDCFQ 583
++ S D +IRVWD+ + F+
Sbjct: 265 LSNSEDKSIRVWDMSKRTGVQTFR 288
Score = 62 (26.9 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 16/80 (20%), Positives = 35/80 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH GV +++SG +D+ VK+W ++ + + + N +S H
Sbjct: 203 GHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE 262
Query: 516 MLAVCLDDFTVNIIDIDTCT 535
++ +D ++ + D+ T
Sbjct: 263 LILSNSEDKSIRVWDMSKRT 282
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 152 (58.6 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS--IKLDNGISFFRT---HQ 512
H G VRG+ + +SGG+D +KVW++K LR L + + RT H
Sbjct: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK------LRRCLFTLLGHLDYIRTTFFHH 103
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
E + DD T+ + + + T + L+GH + A F P +++AS+D T+RVWD
Sbjct: 104 EYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 163
Query: 573 I 573
I
Sbjct: 164 I 164
Score = 111 (44.1 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 34/129 (26%), Positives = 62/129 (48%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264
GPV + F P+ VSG + + VWN + R+ + H + F + P ++
Sbjct: 52 GPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYKLRRCLFTLL-GHLDYIRTTFFHHEYPWIL 109
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
++S D T+++W + + + GH+ QF+ S D ++SA+ D T+R+++
Sbjct: 110 SASDDQTIRVWNWQSRT----CVCVLTGHNHYVMCAQFHP-SEDLVVSASLDQTVRVWDI 164
Query: 325 KSETSNKNL 333
S KNL
Sbjct: 165 -SGLRKKNL 172
Score = 73 (30.8 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 20/84 (23%), Positives = 37/84 (44%)
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWL 559
D G+++ H ++ DD V I ++ + GH ++ A F P +
Sbjct: 205 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 264
Query: 560 ITASMDCTIRVWDIPSSQLIDCFQ 583
++ S D +IRVWD+ + F+
Sbjct: 265 LSNSEDKSIRVWDMSKRTGVQTFR 288
Score = 62 (26.9 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 16/80 (20%), Positives = 35/80 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH GV +++SG +D+ VK+W ++ + + + N +S H
Sbjct: 203 GHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE 262
Query: 516 MLAVCLDDFTVNIIDIDTCT 535
++ +D ++ + D+ T
Sbjct: 263 LILSNSEDKSIRVWDMSKRT 282
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 152 (58.6 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS--IKLDNGISFFRT---HQ 512
H G VRG+ + +SGG+D +KVW++K LR L + + RT H
Sbjct: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK------LRRCLFTLLGHLDYIRTTFFHH 103
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
E + DD T+ + + + T + L+GH + A F P +++AS+D T+RVWD
Sbjct: 104 EYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 163
Query: 573 I 573
I
Sbjct: 164 I 164
Score = 111 (44.1 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 34/129 (26%), Positives = 62/129 (48%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264
GPV + F P+ VSG + + VWN + R+ + H + F + P ++
Sbjct: 52 GPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYKLRRCLFTLL-GHLDYIRTTFFHHEYPWIL 109
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
++S D T+++W + + + GH+ QF+ S D ++SA+ D T+R+++
Sbjct: 110 SASDDQTIRVWNWQSRT----CVCVLTGHNHYVMCAQFHP-SEDLVVSASLDQTVRVWDI 164
Query: 325 KSETSNKNL 333
S KNL
Sbjct: 165 -SGLRKKNL 172
Score = 73 (30.8 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 20/84 (23%), Positives = 37/84 (44%)
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWL 559
D G+++ H ++ DD V I ++ + GH ++ A F P +
Sbjct: 205 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 264
Query: 560 ITASMDCTIRVWDIPSSQLIDCFQ 583
++ S D +IRVWD+ + F+
Sbjct: 265 LSNSEDKSIRVWDMSKRTGVQTFR 288
Score = 62 (26.9 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 16/80 (20%), Positives = 35/80 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH GV +++SG +D+ VK+W ++ + + + N +S H
Sbjct: 203 GHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE 262
Query: 516 MLAVCLDDFTVNIIDIDTCT 535
++ +D ++ + D+ T
Sbjct: 263 LILSNSEDKSIRVWDMSKRT 282
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 152 (58.6 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 42/120 (35%), Positives = 61/120 (50%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRT---HQE 513
H G VRG+ + I +SGG+D +KVW++KQ R I L + + RT H +
Sbjct: 52 HDGPVRGICFHHDQPIFVSGGDDYKIKVWNYKQK-----RCIFTLLGHLDYIRTTFFHHK 106
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ DD TV I + + I L+GH + A F P + +AS+D T+RVWDI
Sbjct: 107 YPWIISASDDQTVRIWNWQSRNSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVWDI 166
Score = 95 (38.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 34/135 (25%), Positives = 66/135 (48%)
Query: 197 LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF 256
L++F V +SF P ++ S ++G + +W+ + + + H V G F
Sbjct: 4 LIKFESKSARVKGISFHPTRPWVLTS-LHSGVIQLWDYRMCVLLEKFDE-HDGPVRGICF 61
Query: 257 LYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQ--FYGNSSDNILSAA 314
+++P+ V+ D +K+W + + R + GH +YI+ F+ + I+SA+
Sbjct: 62 HHDQPIFVSGGDDYKIKVWNYKQK----RCIFTLLGHL---DYIRTTFFHHKYPWIISAS 114
Query: 315 GDSTLRIFNTKSETS 329
D T+RI+N +S S
Sbjct: 115 DDQTVRIWNWQSRNS 129
Score = 92 (37.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESS 515
GH GV V + N I++SG +D+ VK+W + +T L S + N +S H +
Sbjct: 205 GHDRGVNWVAFHHTNPILVSGSDDRQVKIWRYNETKAWELDSCRGHYNNVSSVIFHPNAD 264
Query: 516 MLAVCLDDFTVNIIDIDTCT 535
++ +D ++ + D+ T
Sbjct: 265 LILSNSEDKSIRVWDMQKRT 284
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 110 (43.8 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 193 TDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVT 252
T E L+E V +F TD + + S + +WN + + + H + V
Sbjct: 654 TGEKLLEIKAHEDEVLCCAFSTDDR-FIATCSVDKKVKIWNSMTGGLVH-VYDEHSEQVN 711
Query: 253 GAHFLYNEP--LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNI 310
HF N LL T+S D LKLW ++ + + GH+ N+ +F + D +
Sbjct: 712 CCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMF----GHTNSVNHCRF--SPDDKL 765
Query: 311 L-SAAGDSTLRIFNTKSETSNKNLGI 335
L S + D TL++++ KS K++ +
Sbjct: 766 LASCSADGTLKLWDVKSANERKSINV 791
Score = 96 (38.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 61/283 (21%), Positives = 113/283 (39%)
Query: 64 KLLSVSPQHEDDITC--LSSDFFHIYT-SANNIIYAWRRGID-IVGTYKGHTSPVHLI-L 118
KLL + HED++ C S+D I T S + + W +V Y H+ V+
Sbjct: 657 KLLEIKA-HEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHF 715
Query: 119 PFGPH---LISVDEESNVKVWDIKAEETYLEL-----SFDNDTFKIMGKRWNSCVNVLEP 170
H L + + +K+WD+ +E + S ++ F K SC +
Sbjct: 716 TNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASC-SADGT 774
Query: 171 SPVVDIIGVGLSNKKI-ILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHL 229
+ D+ K I + L E E ++ V S+ DG +MV+ N +
Sbjct: 775 LKLWDVKSAN-ERKSINVKQFFLNSEEPQEDMEVI--VKCCSWSADGTRIMVAAKNK--I 829
Query: 230 TVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI 289
++++ + +I H + F L V + ++LW D L++
Sbjct: 830 FLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVALSQCCVELWNMDSC------LKV 883
Query: 290 RE--GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
+ GH + + + F + S + L+++ D T+R++ TK N
Sbjct: 884 ADCRGHLSWVHCVMFSPDGS-SFLTSSDDQTIRLWETKKVCKN 925
Score = 93 (37.8 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 27/115 (23%), Positives = 52/115 (45%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH VR + + + +IS +D +++VW+++ L++ + + F+ + S +
Sbjct: 1009 GHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVFLQAHQ--ETVKDFKLLKNSKL 1066
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
L+ D I I T I + H + D SPD+ + S D T ++W
Sbjct: 1067 LSWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1121
Score = 90 (36.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ + V L V + ++D+C + GH+ + FSPD +T+S D TIR+W+
Sbjct: 859 QNHLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWE 918
Score = 86 (35.3 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 58/262 (22%), Positives = 107/262 (40%)
Query: 44 ETLFVTC-VGKAFHVYGCNHFKLLSVSPQHEDDITCL----SSDFFHIYTSANN-IIYAW 97
+ TC V K ++ L+ V +H + + C +S + + T++++ + W
Sbjct: 677 DRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLW 736
Query: 98 RRGI-DIVGTYKGHTSPV-HL-ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTF 154
+ T GHT+ V H P L S + +K+WD+K+ S + F
Sbjct: 737 DLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANE--RKSINVKQF 794
Query: 155 KIMGKRWNSCVNVLEP--SPVVDIIGVGLSNK-KIILHNILTDESLMEFIQTWGPVTALS 211
+ + + V+ S D + ++ K KI L +I T L E I T G + +
Sbjct: 795 FLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAE-IHT-GHHSTIQ 852
Query: 212 FRTDGPP--MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD 269
+ P + V + + +WN+ D ++ + H V F + +TSS D
Sbjct: 853 YCDFSPQNHLAVVALSQCCVELWNM-DSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDD 911
Query: 270 NTLKLWIFDKADGNGRLLRIRE 291
T++LW K N ++ +E
Sbjct: 912 QTIRLWETKKVCKNSAIVLKQE 933
Score = 79 (32.9 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 31/115 (26%), Positives = 53/115 (46%)
Query: 480 DQTVKVWHFKQTGKPPLRSIKLDNGI---SFFRTHQESSMLAVCLDDFTVNIIDIDT--- 533
D+T K+W F+ PL ++ G S F +S++LA D+ + I ++
Sbjct: 1115 DKTAKIWSFELLS--PLHELRGHKGCVRCSVFSV--DSTLLATGDDNGEIRIWNVSNGEL 1170
Query: 534 ---CTIIRKLSG---HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
C I G H G +TD FSPDS+ L++A ++ W++ + + F
Sbjct: 1171 LHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAGG--YLKWWNVVTGESSQTF 1223
Score = 79 (32.9 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 26/110 (23%), Positives = 50/110 (45%)
Query: 471 NQIVISGGNDQTVK-VWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNII 529
N ++S D TVK +W TG+ + + + +++ + D T I
Sbjct: 1063 NSKLLSWSFDGTVKKIWSII-TGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1121
Query: 530 DIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ + + +L GH G + + FS DS L T + IR+W++ + +L+
Sbjct: 1122 SFELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGELL 1171
Score = 74 (31.1 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 522 DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+D V I+++ I + GH + F+ D + LI++S D +I+VW+ S + +
Sbjct: 989 EDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYV 1046
Score = 71 (30.1 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
N R+ + R GH +IQF + ++S++ DS+++++N +SE
Sbjct: 1000 NNRIFQSRIGHKKTVRHIQFTDDGK-TLISSSDDSSIQVWNWQSE 1043
Score = 62 (26.9 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 22/123 (17%), Positives = 57/123 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH+ V V+ ++ +DQT+++W K+ K +K + + F QE+ +
Sbjct: 888 GHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLKQEIDVVF----QENEV 943
Query: 517 LAVCLDDFT-VNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+ + +D+ + +I+ T I + Q++ SP +++ D + + ++ +
Sbjct: 944 MVLAVDNIKRLQLINGKTGQIDYLIEA---QVSCCCLSPHLQYIAFGGEDGAVEILELLN 1000
Query: 576 SQL 578
+++
Sbjct: 1001 NRI 1003
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 100 (40.3 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 37/142 (26%), Positives = 56/142 (39%)
Query: 457 GHVGGVRGVVSDNLNQ-IVISGGNDQTVKVWHFKQT--GK---PPLRSIKL--------- 501
GH V + L + +++G D TVK+W + K P I L
Sbjct: 416 GHTHSVGTICCSRLKETFLVTGSQDCTVKLWPIPEALLSKGTAPDSGPILLQAQATQRCH 475
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLIT 561
D I+ +LA D T + + C ++ SGH L FSP + L T
Sbjct: 476 DKDINSVAVAPNDKLLATGSQDRTAKLWALPHCQLLGIFSGHRRGLWCVQFSPMDQVLAT 535
Query: 562 ASMDCTIRVWDIPSSQLIDCFQ 583
AS D TI++W + + F+
Sbjct: 536 ASADGTIKLWALQDFSCLKTFE 557
Score = 99 (39.9 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 48/189 (25%), Positives = 83/189 (43%)
Query: 65 LLSVSPQHEDDITC--LSSDFFHIYTSANNII---YAWRRGIDIVGTYKG-HTSPVHLIL 118
L S+ + ++DIT LS D + T+ ++ +AWR G I +K HT+PV +
Sbjct: 55 LRSLEQEDQEDITAFELSPDDQVLVTATRALLLAQWAWREG-SITRLWKAIHTAPV-ATM 112
Query: 119 PFGPH--LISVDE-ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVD 175
F P L++ + V+VWDI Y T G + P P
Sbjct: 113 AFDPTSTLLATGGCDGAVRVWDIVRH--Y-------GTHHFRGSPGVVHLVTFHPDPARL 163
Query: 176 IIGVGLSNKKIILHNILTDESLMEFIQT-WGPVTALSFRTDGPPMMVSGSNTGHLTVWNL 234
++ ++ I + + L D+S + + + VT+L+F DG M+ SG + +W+L
Sbjct: 164 LLFSSAADATIRMWS-LQDQSCLAVMTAHYSAVTSLTFSADGHTMLSSGRDK-ICVIWDL 221
Query: 235 EDRQVENQI 243
+ Q +
Sbjct: 222 QSHQATRTV 230
Score = 84 (34.6 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 28/116 (24%), Positives = 49/116 (42%)
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
++ +GS +W L Q+ I HR+ + F + +L T+S D T+KLW
Sbjct: 490 LLATGSQDRTAKLWALPHCQLLG-IFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQ 548
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFNTKSETSNKNL 333
L+ EGH A + F + + +G D ++++ K+ K L
Sbjct: 549 DFS----CLKTFEGHDASVLKVVFVSRGTQLLSRPSGSDGLVKLWTIKNNECVKTL 600
Score = 81 (33.6 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 244 KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFY 303
++ H K + N+ LL T S D T KLW +LL I GH +QF
Sbjct: 472 QRCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPHC----QLLGIFSGHRRGLWCVQF- 526
Query: 304 GNSSDNILS-AAGDSTLRIF 322
+ D +L+ A+ D T++++
Sbjct: 527 -SPMDQVLATASADGTIKLW 545
Score = 39 (18.8 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 457 GHVGGVRGVVSDNLNQIVIS--GGNDQTVKVWHFK 489
GH V VV + ++S G+D VK+W K
Sbjct: 558 GHDASVLKVVFVSRGTQLLSRPSGSDGLVKLWTIK 592
Score = 37 (18.1 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
H V G+ L+ ++G +D V +W
Sbjct: 603 HEDKVWGLHCSRLDDRALTGASDSCVILW 631
>CGD|CAL0005164 [details] [associations]
symbol:SOF1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005164 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000210082 KO:K11806
InterPro:IPR007287 Pfam:PF04158 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717685.1 RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9
STRING:Q5A7Q9 GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 112 (44.5 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 49/237 (20%), Positives = 103/237 (43%)
Query: 131 SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSC-VNVLEPSPVVDIIGVGLSNKKIILH 189
+ +++WD+ + +LS+ D + ++N N++ S + I + +H
Sbjct: 199 ATIQLWDVNRSKHISDLSWGADNVGTV--KFNQTETNIIASSGSDNSIVLYDIRTNTPVH 256
Query: 190 NILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRK 249
++T SL TW P+ A +F T + G+L +++ + Q ++ K H
Sbjct: 257 KVVT--SLRNNCITWNPMEAFNFATGNE------DHNGYL--YDMRNLQKTLKVYKGHVG 306
Query: 250 VVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN 309
+ F LVT S D T++LW DG + + + Y S
Sbjct: 307 AIMDVDFAPTGQELVTGSYDKTIRLW--KTLDGRSK--DVYHTKRMQKVFSVKYSTDSKY 362
Query: 310 ILSAAGDSTLRIFNTKSETSNKNLGIASAXXXXXXXXXXXEKMNEKF-ILPPVSQFS 365
I+S + D+ LR++ +S+ S+++ I S+ +K+ E++ +P +++ +
Sbjct: 363 IISGSDDTNLRVW--RSDASSRS-NIKSSRQRAKLEYQ--DKLKERYKYMPEINRIA 414
Score = 106 (42.4 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 35/125 (28%), Positives = 59/125 (47%)
Query: 449 SYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISF 507
S+G DN VG V+ + I+ S G+D ++ ++ + T P + + L N
Sbjct: 216 SWGADN----VGTVK--FNQTETNIIASSGSDNSIVLYDIR-TNTPVHKVVTSLRNNCIT 268
Query: 508 FRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKL-SGHMGQLTDADFSPDSRWLITASMDC 566
+ E+ A +D + D+ K+ GH+G + D DF+P + L+T S D
Sbjct: 269 WNP-MEAFNFATGNEDHNGYLYDMRNLQKTLKVYKGHVGAIMDVDFAPTGQELVTGSYDK 327
Query: 567 TIRVW 571
TIR+W
Sbjct: 328 TIRLW 332
Score = 86 (35.3 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
+ SGS G + WNL DR +E KAH +V+G N+ + + D T+K+W +
Sbjct: 83 IASGSGDGIIKYWNLTDR-LETASFKAHYGMVSGICIYANK--MYSCGDDKTIKIWSVNS 139
Query: 280 AD 281
D
Sbjct: 140 DD 141
Score = 59 (25.8 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 13/65 (20%), Positives = 31/65 (47%)
Query: 89 SANNIIYAWRRGIDI-VGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLEL 147
S + II W + ++K H V I + + S ++ +K+W + +++ +++
Sbjct: 87 SGDGIIKYWNLTDRLETASFKAHYGMVSGICIYANKMYSCGDDKTIKIWSVNSDDFDIKV 146
Query: 148 SFDND 152
+ D D
Sbjct: 147 NDDVD 151
>UNIPROTKB|Q5A7Q9 [details] [associations]
symbol:SOF1 "Putative uncharacterized protein SOF1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005164 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000210082 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:AACQ01000051 EMBL:AACQ01000050 RefSeq:XP_717685.1
RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9 STRING:Q5A7Q9
GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 112 (44.5 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 49/237 (20%), Positives = 103/237 (43%)
Query: 131 SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSC-VNVLEPSPVVDIIGVGLSNKKIILH 189
+ +++WD+ + +LS+ D + ++N N++ S + I + +H
Sbjct: 199 ATIQLWDVNRSKHISDLSWGADNVGTV--KFNQTETNIIASSGSDNSIVLYDIRTNTPVH 256
Query: 190 NILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRK 249
++T SL TW P+ A +F T + G+L +++ + Q ++ K H
Sbjct: 257 KVVT--SLRNNCITWNPMEAFNFATGNE------DHNGYL--YDMRNLQKTLKVYKGHVG 306
Query: 250 VVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN 309
+ F LVT S D T++LW DG + + + Y S
Sbjct: 307 AIMDVDFAPTGQELVTGSYDKTIRLW--KTLDGRSK--DVYHTKRMQKVFSVKYSTDSKY 362
Query: 310 ILSAAGDSTLRIFNTKSETSNKNLGIASAXXXXXXXXXXXEKMNEKF-ILPPVSQFS 365
I+S + D+ LR++ +S+ S+++ I S+ +K+ E++ +P +++ +
Sbjct: 363 IISGSDDTNLRVW--RSDASSRS-NIKSSRQRAKLEYQ--DKLKERYKYMPEINRIA 414
Score = 106 (42.4 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 35/125 (28%), Positives = 59/125 (47%)
Query: 449 SYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISF 507
S+G DN VG V+ + I+ S G+D ++ ++ + T P + + L N
Sbjct: 216 SWGADN----VGTVK--FNQTETNIIASSGSDNSIVLYDIR-TNTPVHKVVTSLRNNCIT 268
Query: 508 FRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKL-SGHMGQLTDADFSPDSRWLITASMDC 566
+ E+ A +D + D+ K+ GH+G + D DF+P + L+T S D
Sbjct: 269 WNP-MEAFNFATGNEDHNGYLYDMRNLQKTLKVYKGHVGAIMDVDFAPTGQELVTGSYDK 327
Query: 567 TIRVW 571
TIR+W
Sbjct: 328 TIRLW 332
Score = 86 (35.3 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
+ SGS G + WNL DR +E KAH +V+G N+ + + D T+K+W +
Sbjct: 83 IASGSGDGIIKYWNLTDR-LETASFKAHYGMVSGICIYANK--MYSCGDDKTIKIWSVNS 139
Query: 280 AD 281
D
Sbjct: 140 DD 141
Score = 59 (25.8 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 13/65 (20%), Positives = 31/65 (47%)
Query: 89 SANNIIYAWRRGIDI-VGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLEL 147
S + II W + ++K H V I + + S ++ +K+W + +++ +++
Sbjct: 87 SGDGIIKYWNLTDRLETASFKAHYGMVSGICIYANKMYSCGDDKTIKIWSVNSDDFDIKV 146
Query: 148 SFDND 152
+ D D
Sbjct: 147 NDDVD 151
>FB|FBgn0261119 [details] [associations]
symbol:Prp19 "Prp19" species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS;TAS]
[GO:0005681 "spliceosomal complex" evidence=ISS;TAS] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 EMBL:AE013599
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 OMA:QWQELKV FlyBase:FBgn0261119
EMBL:AF160906 RefSeq:NP_523783.1 UniGene:Dm.1432 SMR:Q7KLW9
IntAct:Q7KLW9 STRING:Q7KLW9 EnsemblMetazoa:FBtr0086723 GeneID:37123
KEGG:dme:Dmel_CG5519 UCSC:CG5519-RA CTD:321544 InParanoid:Q7KLW9
GenomeRNAi:37123 NextBio:802060 Uniprot:Q7KLW9
Length = 505
Score = 101 (40.6 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 30/110 (27%), Positives = 52/110 (47%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+ AL + +++G N + TV+N + Q+ I K H K +T + NE ++T
Sbjct: 225 ILALDINSADHSKILTGGNDKNATVFNKDTEQMV-AILKGHTKKITKVIYHPNEDTVITG 283
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD 316
SPD +++W + LLR EG P + + + D +LS + D
Sbjct: 284 SPDMNIRIWHVPTSQTQ-LLLRCHEG---PVTGLSLHP-TGDYLLSTSSD 328
Score = 93 (37.8 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 27/122 (22%), Positives = 54/122 (44%)
Query: 454 NQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG--ISFFRTH 511
N PGH G + + + + +D VK+W ++ ++I+LD+G +
Sbjct: 387 NFPGHTGPISAISFSENGYYLATAADDACVKLWDLRKLKN--FKTIQLDDGYEVKDLCFD 444
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
Q + LA+ D V + ++ + H T F +++L + SMD T++++
Sbjct: 445 QSGTYLAIAGSDVRVYLCK--QWQELKVFNDHTALATGVRFGKHAQYLASTSMDRTLKLY 502
Query: 572 DI 573
I
Sbjct: 503 AI 504
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 115 (45.5 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 39/158 (24%), Positives = 69/158 (43%)
Query: 426 FVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKV 485
++ G G V+ F ++SG S D + + + S + + + SG D + +
Sbjct: 120 YIATGSHLGKVNIFGVESGKKEHSL--DTRGKFILSI--AYSPD-GKYLASGAIDGIINI 174
Query: 486 WHFKQTGKPPLRSIKLDN-GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
+ TGK L +++ I +S +L DD + I D+ + LSGH
Sbjct: 175 FDIA-TGKL-LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHG 232
Query: 545 GQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
+ FSPD +++S D +I+VWD S ++ F
Sbjct: 233 SWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTF 270
Score = 71 (30.1 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 215 DGPPMMVSGSNTGHLTVWNLEDRQVENQ-IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLK 273
DG +V+GS + VW D ++E Q + H+ V + N + +SS D ++
Sbjct: 30 DGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIR 89
Query: 274 LW 275
LW
Sbjct: 90 LW 91
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 151 (58.2 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS--IKLDNGISFFRT---HQ 512
H G VRG+ + +SGG+D +KVW++K LR L + + RT H
Sbjct: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK------LRRCLFTLLGHLDYIRTTFFHH 103
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
E + DD T+ + + + T + L+GH + A F P +++AS+D T+RVWD
Sbjct: 104 EYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWD 163
Query: 573 I 573
I
Sbjct: 164 I 164
Score = 108 (43.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 33/129 (25%), Positives = 62/129 (48%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264
GPV + F P+ VSG + + VWN + R+ + H + F + P ++
Sbjct: 52 GPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYKLRRCLFTLL-GHLDYIRTTFFHHEYPWIL 109
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
++S D T+++W + + + GH+ QF+ + D ++SA+ D T+R+++
Sbjct: 110 SASDDQTIRVWNWQSRT----CVCVLTGHNHYVMCAQFHP-TEDLVVSASLDQTVRVWDI 164
Query: 325 KSETSNKNL 333
S KNL
Sbjct: 165 -SGLRKKNL 172
Score = 73 (30.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/84 (23%), Positives = 37/84 (44%)
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWL 559
D G+++ H ++ DD V I ++ + GH ++ A F P +
Sbjct: 205 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 264
Query: 560 ITASMDCTIRVWDIPSSQLIDCFQ 583
++ S D +IRVWD+ + F+
Sbjct: 265 LSNSEDKSIRVWDMSKRTGVQTFR 288
>DICTYBASE|DDB_G0286457 [details] [associations]
symbol:strap "putative serine-threonine kinase
receptor-associated protein" species:44689 "Dictyostelium
discoideum" [GO:0005575 "cellular_component" evidence=ND]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0286457
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000085 GO:GO:0030512
InterPro:IPR013979 Pfam:PF08662 KO:K13137 OMA:LWQTTVG
RefSeq:XP_637742.1 ProteinModelPortal:Q54LT8
EnsemblProtists:DDB0233062 GeneID:8625608 KEGG:ddi:DDB_G0286457
InParanoid:Q54LT8 ProtClustDB:CLSZ2430103 Uniprot:Q54LT8
Length = 293
Score = 104 (41.7 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 29/99 (29%), Positives = 44/99 (44%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532
+V + GN+ T W + PL+ L ++ H ++S DF V++ D
Sbjct: 196 LVTTAGNEVTF--WDAQSFY--PLKVYSLPFDVNCASLHPDNSKFIAGGSDFWVHVYDFS 251
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
T I GH G + FSPD + S+D TIR+W
Sbjct: 252 TGNEIEVNKGHHGPVNCCRFSPDGASFASGSLDGTIRLW 290
Score = 82 (33.9 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
H+ +V A F N +VT + L+ IFD N LL+I GH+ + ++
Sbjct: 96 HQSIVKTADFSNNNSRVVTGGSEKILR--IFDLERPNDPLLQI-SGHTNTIKTATWSVHN 152
Query: 307 SDNILSAAGDSTLRIFNTKSET 328
D +LS D +RI++ +S T
Sbjct: 153 DDIVLSGGLDEVIRIWDLRSGT 174
Score = 78 (32.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 34/121 (28%), Positives = 55/121 (45%)
Query: 206 PVTALSF---RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPL 262
PV+ LSF +DG +VS G + N E+ + H+ V + F
Sbjct: 13 PVSDLSFSNENSDGS-FIVSACLDGSPMLRNGENGDWIGTFE-GHKGAVWSSRFNSTASQ 70
Query: 263 LVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322
+T+S D T+KLW D +G+ +L I H + F N+S +++ + LRIF
Sbjct: 71 ALTASADYTVKLW--DTLNGS-EILSIE--HQSIVKTADFSNNNS-RVVTGGSEKILRIF 124
Query: 323 N 323
+
Sbjct: 125 D 125
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 135 (52.6 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 34/119 (28%), Positives = 57/119 (47%)
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN-GISFFRTHQESSM 516
H G V V ++++ +GG D+ VK+W P S+ N GI+ S
Sbjct: 321 HDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSY 380
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
L +DF I +D + L+GH G++ A F D+ +++ S D T+++WD+ S
Sbjct: 381 LLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRS 439
Score = 106 (42.4 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 29/113 (25%), Positives = 56/113 (49%)
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTD--ESLMEFIQTWGPVTALSFRTDGPPMMVS 222
VN ++ SP ++ G ++++ L +L D E + +T++ F + G +++
Sbjct: 325 VNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGS-YLLA 383
Query: 223 GSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
SN +W ++D ++ + + H V A FL + +V+ S D TLKLW
Sbjct: 384 ASNDFASRIWTVDDNRLRHTLT-GHSGKVLSAKFLLDNARIVSGSHDRTLKLW 435
Score = 89 (36.4 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 27/111 (24%), Positives = 51/111 (45%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531
Q V+SG D+ ++ W + + ++ ++L I+ + E + L C D + IID+
Sbjct: 461 QCVMSGHFDKKIRFWDIRT--ESIVKELELLGRITALDLNSERTELLTCSRDDLLKIIDL 518
Query: 532 DTCTIIRKLSGH---MGQ-LTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ + S G T FSPD ++ S D + VW++ + +L
Sbjct: 519 RVGAVKQTFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKL 569
Score = 81 (33.6 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 30/127 (23%), Positives = 55/127 (43%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWN-LEDRQVENQIKKAHRKVVTGAHFLYNEPLL 263
G V A+ F + G ++ +G + +W L DR +T F L
Sbjct: 323 GEVNAVQF-SPGSRLLATGGMDRRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYL 381
Query: 264 VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
+ +S D ++W D + RL GHS +F +++ I+S + D TL++++
Sbjct: 382 LAASNDFASRIWTVD----DNRLRHTLTGHSGKVLSAKFLLDNA-RIVSGSHDRTLKLWD 436
Query: 324 TKSETSN 330
+S+ N
Sbjct: 437 LRSKVCN 443
Score = 43 (20.2 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAH 255
GH WN Q Q+K H++ +T H
Sbjct: 72 GHDGTWNDAQLQELAQLKIKHQEELTELH 100
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 123 (48.4 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 51/225 (22%), Positives = 97/225 (43%)
Query: 108 KGHTSPVHLILPFGP---HLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSC 164
KGH + + + F HL+S + V+VWD++ D NS
Sbjct: 76 KGHKGAI-MEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIV-------NS- 126
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS 224
V+V P +I + +++H++ + E+ +FI + TA++F D ++ G
Sbjct: 127 VDVNRRGP--QMICSASDDGTVMVHDMRSKEAAKKFICKYQQ-TAVTFN-DAADNVICGG 182
Query: 225 NTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNG 284
+ VW++ V + HR +T +N L+++S D +L W
Sbjct: 183 IDNQIKVWDMLRNDVR-YVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQ 241
Query: 285 RLLRIREG--HSAPPNYIQFYGNSSDNILSA-AGDSTLRIFNTKS 326
RL+ +G H+ N ++ + DN ++A + D + ++N KS
Sbjct: 242 RLVARYQGASHNFEKNLLKCGWSPRDNYITAGSADRFVYVWNAKS 286
Score = 63 (27.2 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 432 SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTV 483
++G DRF A + + PGH+G V QI++S G+D+T+
Sbjct: 271 TAGSADRFVYVWNAKSRACVY-KLPGHLGSVNCTALHPTQQILLSAGSDKTI 321
Score = 52 (23.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 537 IRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
+ KL GH+G + P + L++A D TI
Sbjct: 290 VYKLPGHLGSVNCTALHPTQQILLSAGSDKTI 321
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 124 (48.7 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 36/137 (26%), Positives = 60/137 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQ 512
GH V + D ++ S +D T+K+W KQ + ++ N I + T
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC--VHDLQAHNKEIYTIKWSPTGP 404
Query: 513 ESS------MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDC 566
+S MLA D TV + D+D I L+ H + FSPD R+L + S D
Sbjct: 405 GTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDK 464
Query: 567 TIRVWDIPSSQLIDCFQ 583
+ +W+ + L+ ++
Sbjct: 465 CVHIWNTQTGALVHSYR 481
Score = 68 (29.0 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 41/154 (26%), Positives = 57/154 (37%)
Query: 183 NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN- 241
NK ++L ES + FI W PV+ L + SGS +WNL +
Sbjct: 160 NKAVVLRG---HESEV-FICAWNPVSDL---------LASGSGDSTARIWNLSENSTSGS 206
Query: 242 -QIKKAH-----------RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI 289
Q+ H K VT + LL T S D ++W DGN L
Sbjct: 207 TQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT---KDGN---LAS 260
Query: 290 REGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
G P + + + ILSA D T I++
Sbjct: 261 TLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWD 294
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 126 (49.4 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 37/135 (27%), Positives = 61/135 (45%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQ-TGKPPLRSIKLD-NGISFFRTHQES 514
GH V + D ++ S +D T+K+W KQ T L++ + I + T +
Sbjct: 356 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGT 415
Query: 515 S------MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
S MLA D TV + D+D I L+ H + FSPD ++L + S D +
Sbjct: 416 SNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCV 475
Query: 569 RVWDIPSSQLIDCFQ 583
+W+ S L+ ++
Sbjct: 476 HIWNTQSGTLVHSYR 490
Score = 66 (28.3 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 38/152 (25%), Positives = 55/152 (36%)
Query: 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN--QIKKAH---------- 247
FI W PV+ L + SGS +WNL + Q+ H
Sbjct: 182 FICAWNPVSDL---------LASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVP 232
Query: 248 -RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
K VT + + LL T S D ++W DGN L G P + +
Sbjct: 233 SNKDVTSLDWNSDGTLLATGSYDGFARIWT---EDGN---LASTLGQHKGPIFALKWNKK 286
Query: 307 SDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
+ ILSA D T I++ + + + SA
Sbjct: 287 GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSA 318
Score = 59 (25.8 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 289 IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
+ GH + +I + SD + S +GDST RI+N +E SN
Sbjct: 173 VLRGHESEV-FICAWNPVSDLLASGSGDSTARIWNL-NENSN 212
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 132 (51.5 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQ 512
GH+ GV V + + +G D+TV++W +Q G S++L G +
Sbjct: 421 GHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-GN----SVRLFTGHCGPVRCLAFSP 475
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
L +D + + D+ + T+ + L GH +T FS DS + +ASMD ++R+WD
Sbjct: 476 NGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWD 535
Query: 573 IPS 575
I S
Sbjct: 536 IKS 538
Score = 125 (49.1 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 32/105 (30%), Positives = 52/105 (49%)
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDN--GISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
S D T ++W F +T PLR I + G+ + H S+ LA D TV +
Sbjct: 398 SASYDHTARLWSFDRTY--PLR-IYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 454
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+R +GH G + FSP+ ++L++A D +++WD+ S L
Sbjct: 455 GNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTL 499
Score = 61 (26.5 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 109 GHTSPVHL--ILPFGPHLISVDEESNVKVWDIKA 140
GH PV+ LP L+S E+++++ WD+++
Sbjct: 337 GHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLES 370
Score = 54 (24.1 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 23/90 (25%), Positives = 40/90 (44%)
Query: 235 EDRQV-ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH 293
EDR E ++ H V FL + L++ S D +++ W D +L +GH
Sbjct: 325 EDRTATERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYW--DLESFTNTVLY--QGH 380
Query: 294 SAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
+ P + +S SA+ D T R+++
Sbjct: 381 AYPVWDLDISPHSLF-FASASYDHTARLWS 409
Score = 51 (23.0 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 278 DKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETS 329
D+ D ++ GH P +F +SS +LS + D+++R ++ +S T+
Sbjct: 323 DEEDRTATERKVLLGHCGPVYSTRFLPDSSA-LLSCSEDTSIRYWDLESFTN 373
Score = 41 (19.5 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNI 191
+N E SP ++ GL+N I L ++
Sbjct: 271 LNTAEASPDNKLLATGLNNSSIKLWSL 297
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 122 (48.0 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 36/137 (26%), Positives = 60/137 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQ 512
GH V + D ++ S +D T+K+W KQ + + ++ N I + T
Sbjct: 402 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQ--EVCIHDLQAHNKEIYTIKWSPTGP 459
Query: 513 ESS------MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDC 566
+S MLA D TV + DI+ L+ H + FSPD R+L + S D
Sbjct: 460 ATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGRYLASGSFDK 519
Query: 567 TIRVWDIPSSQLIDCFQ 583
+ +W+ S L+ ++
Sbjct: 520 CVHIWNTQSGNLVHSYR 536
Score = 71 (30.1 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 39/152 (25%), Positives = 55/152 (36%)
Query: 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV--ENQIKKAH---------- 247
FI W PV+ L + SGS +WNL + Q+ H
Sbjct: 228 FICAWNPVSDL---------LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 278
Query: 248 -RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
K VT + N LL T S D ++W DGN L G P + +
Sbjct: 279 SNKDVTSLDWNTNGTLLATGSYDGFARIWT---EDGN---LASTLGQHKGPIFALKWNRK 332
Query: 307 SDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
+ ILSA D T I++ + + + SA
Sbjct: 333 GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSA 364
Score = 59 (25.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 289 IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
+ GH + +I + SD + S +GDST RI+N +E SN
Sbjct: 219 VLRGHESEV-FICAWNPVSDLLASGSGDSTARIWNL-NENSN 258
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 147 (56.8 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 67/248 (27%), Positives = 103/248 (41%)
Query: 84 FHIYTSANNIIYAWRRGIDI-VGTYKGHTSPVH--LILPFGPHLISVDEESNVKVWDIKA 140
F + +SA+ I W ++ + YKGH PV PFG + S + ++W
Sbjct: 432 FVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIW---- 487
Query: 141 EETYLELSFDN-DTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLME 199
S D +IM + V+ ++ P + I G S+K + L ++ T E +
Sbjct: 488 -------SMDRIQPLRIMAGHLSD-VDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRI 539
Query: 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN 259
FI V +L+ DG M SG G + +W+L + + H V +
Sbjct: 540 FIGHRSMVLSLAMSPDGR-YMASGDEDGTIMMWDLSTARCITPLM-GHNSCVWSLSYSGE 597
Query: 260 EPLLVTSSPDNTLKLWI------FDKAD---GNG---RLLRIREGHSAPPNYIQFYGNSS 307
LL + S D T+KLW KA+ GN R LR S P + ++F S
Sbjct: 598 GSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPVHALRF---SR 654
Query: 308 DNILSAAG 315
N+L AAG
Sbjct: 655 RNLLFAAG 662
Score = 124 (48.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 35/121 (28%), Positives = 58/121 (47%)
Query: 457 GHVGGVRGVV-SDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS 515
GH+ V V N N I +G +D+TV++W QTG+ I + + +
Sbjct: 500 GHLSDVDCVQWHPNCNYIA-TGSSDKTVRLWDV-QTGECVRIFIGHRSMVLSLAMSPDGR 557
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+A +D T+ + D+ T I L GH + +S + L + S DCT+++WD+ S
Sbjct: 558 YMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 617
Query: 576 S 576
S
Sbjct: 618 S 618
Score = 68 (29.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 278 DKADG-NGRL-LRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
D++ G NGR + GHS P Y + D +LS++ D+T+R+++TK
Sbjct: 400 DQSIGPNGRRSYTLLLGHSGPV-YSATFSPPGDFVLSSSADTTIRLWSTK 448
Score = 55 (24.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 23/77 (29%), Positives = 34/77 (44%)
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
H V A F +++SS D T++LW K + N L +GH+ P QF
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWS-TKLNAN---LVCYKGHNYPVWDAQF-SPF 471
Query: 307 SDNILSAAGDSTLRIFN 323
S + D T RI++
Sbjct: 472 GHYFASCSHDRTARIWS 488
Score = 49 (22.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 109 GHTSPVH--LILPFGPHLISVDEESNVKVWDIK 139
GH+ PV+ P G ++S ++ +++W K
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTK 448
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 139 (54.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQ 512
GH+ V V + + +G D+TV++W +Q G S++L G +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-GN----SVRLFTGHRGPVLSLAFSP 478
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
LA +D + + D+ + T+ ++L GH +T FSPDS + +ASMD ++RVWD
Sbjct: 479 NGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWD 538
Query: 573 I 573
I
Sbjct: 539 I 539
Score = 129 (50.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 36/124 (29%), Positives = 58/124 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN--GISFFRTHQES 514
GH V V + SG +D+T ++W F +T PLR I + + + H S
Sbjct: 382 GHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTY--PLR-IYAGHLADVDCVKFHPNS 438
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
+ LA D TV + +R +GH G + FSP+ ++L +A D +++WD+
Sbjct: 439 NYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 498
Query: 575 SSQL 578
S L
Sbjct: 499 SGTL 502
Score = 53 (23.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 102 DIVGT----YKGHTSPVHL--ILPFGPHLISVDEESNVKVWDI 138
D VGT +GH PV+ L L+S E+ +++ WD+
Sbjct: 329 DDVGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL 371
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 123 (48.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 33/118 (27%), Positives = 55/118 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESS 515
GH+ V V + + +G D+TV++W +Q +R G +
Sbjct: 436 GHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGAS--VRLFTGHRGPVLTLAFSPNGK 493
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
LA +D + + D+ + + + L GH ++ FS DS + +ASMD T+RVWDI
Sbjct: 494 YLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDI 551
Score = 116 (45.9 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCT 535
+ +D+T ++W F +T L + L + + + H S+ +A D TV +
Sbjct: 413 TASHDRTARLWSFARTYPLRLYAGHLSD-VDCVKFHPNSNYIATGSTDKTVRLWSTRQGA 471
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+R +GH G + FSP+ ++L +A D +++WD+ S L
Sbjct: 472 SVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGL 514
Score = 108 (43.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 37/150 (24%), Positives = 70/150 (46%)
Query: 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS 222
S V+ ++ P + I G ++K + L + S+ F GPV L+F +G + +
Sbjct: 439 SDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASA 498
Query: 223 GSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG 282
G + L +W+L + ++ H ++ F + L+ ++S DNT+++W A G
Sbjct: 499 GEDQ-RLKLWDLASGGLFKDLR-GHTDTISSLSFSQDSSLVASASMDNTVRVWDIRNAHG 556
Query: 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILS 312
+ +G S+ I Y S+ NIL+
Sbjct: 557 SAPT----DGCSS--ELIGQYTGSTSNILN 580
Score = 70 (29.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 104 VGTYKGHTSPVH--LILPFGPHLISVDEESNVKVWDIKA 140
+ T +GH+ PV+ L L+S E+S V+ WD+K+
Sbjct: 347 IKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKS 385
>MGI|MGI:1341864 [details] [associations]
symbol:Nsmaf "neutral sphingomyelinase (N-SMase) activation
associated factor" species:10090 "Mus musculus" [GO:0005123 "death
receptor binding" evidence=TAS] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0016230 "sphingomyelin
phosphodiesterase activator activity" evidence=ISO] [GO:0043085
"positive regulation of catalytic activity" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1341864 Pfam:PF02893 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 EMBL:CH466538 InterPro:IPR004182
SMART:SM00568 GO:GO:0005123 Gene3D:1.10.1540.10 Gene3D:2.30.29.40
InterPro:IPR000409 InterPro:IPR023362 Pfam:PF02138 SMART:SM01026
SUPFAM:SSF81837 PROSITE:PS50197 GeneTree:ENSGT00670000097747
EMBL:AL772306 CTD:8439 HOGENOM:HOG000231605 HOVERGEN:HBG005639
OMA:DKNRFQS OrthoDB:EOG4M91QQ ChiTaRS:NSMAF EMBL:AF013632
EMBL:BX510318 EMBL:BC145961 EMBL:BC145963 IPI:IPI00265718
RefSeq:NP_035075.2 UniGene:Mm.3059 ProteinModelPortal:O35242
SMR:O35242 STRING:O35242 PhosphoSite:O35242 PaxDb:O35242
PRIDE:O35242 Ensembl:ENSMUST00000029910 GeneID:18201 KEGG:mmu:18201
InParanoid:A2AKK1 NextBio:293572 Bgee:O35242 Genevestigator:O35242
GermOnline:ENSMUSG00000028245 Uniprot:O35242
Length = 920
Score = 134 (52.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPP--------LRSIKLDNGISFFRTHQESSMLAVCLD 522
N + SG D TVKVW P L ++ D ++ + S++L
Sbjct: 727 NDRLYSGSWDSTVKVWSGVPAEMPGTKRHQFDLLAELEHDVSVNTINLNAVSTLLVSGTK 786
Query: 523 DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
+ VNI D+ T T++ + S H G + DA FSPDSR +++ +D + V D+ + LI
Sbjct: 787 EGMVNIWDLTTATLLHQTSCHSGTVCDAAFSPDSRHILSTGVDGCLNVIDVQTGMLI 843
Score = 63 (27.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 232 W-NLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
W N+ Q+ Q K H++ VTG N + T+S D+TLK++
Sbjct: 617 WSNIAKLQLHEQYK-IHKEAVTGIAVSCNGSSVFTTSQDSTLKMF 660
Score = 51 (23.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/117 (19%), Positives = 56/117 (47%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
VT ++ +G + + S L +++ E + ++ I ++ ++ L + +++S
Sbjct: 636 VTGIAVSCNGSSVFTT-SQDSTLKMFSKESKMLQRSISFSNM-ALSSCLLLPGDTTVISS 693
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
S DN + + + A G R GH + I ++ +D + S + DST+++++
Sbjct: 694 SWDNNV--YFYSIAFG--RRQDTLMGHDDAVSKICWH---NDRLYSGSWDSTVKVWS 743
Score = 43 (20.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 6/32 (18%), Positives = 21/32 (65%)
Query: 306 SSDNILSAAGDSTLRIFNTKSETSNKNLGIAS 337
+ ++ + + DSTL++F+ +S+ +++ ++
Sbjct: 644 NGSSVFTTSQDSTLKMFSKESKMLQRSISFSN 675
Score = 37 (18.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 293 HSAPPNYIQFY--GNSSDNILSAAG---DSTLRIFNTKSET 328
H + P Y+ FY + + +L D+ R+FN+ +ET
Sbjct: 391 HYSSPGYVLFYLVRIAPEYMLCLQNGRFDNADRMFNSIAET 431
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/180 (21%), Positives = 86/180 (47%)
Query: 408 KQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHV---GGVRG 464
K ++S C + G +++ G G ++ +N +G R + Q + V
Sbjct: 210 KFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLC 269
Query: 465 VVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN-GISFFRTHQESSMLAVCLDD 523
+ +++ +G D +KVW Q+G+ R + + G++ ++SS + D
Sbjct: 270 MCFSRDTEMLATGAQDGKIKVWKI-QSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFD 328
Query: 524 FTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
T+ I + + +++ GH + +A F+ D ++I+AS D T++VW++ +++ + F+
Sbjct: 329 QTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNVKTTECSNTFK 388
Score = 137 (53.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 41/155 (26%), Positives = 74/155 (47%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
V + F D M+ +G+ G + VW ++ Q + ++AH K VT F + ++++
Sbjct: 267 VLCMCFSRD-TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSA 325
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
S D T+++ +G+ L+ GHS+ N F I+SA+ D T++++N K+
Sbjct: 326 SFDQTIRIHGLK----SGKTLKEFRGHSSFVNEATFT-QDGHYIISASSDGTVKVWNVKT 380
Query: 327 -ETSN--KNLGIASAXXXXXXXXXXXEKMNEKFIL 358
E SN K+LG + K E F++
Sbjct: 381 TECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVV 415
Score = 41 (19.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 12/53 (22%), Positives = 22/53 (41%)
Query: 520 CL-DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
C+ +DF + T + R L+ H + P + T S D +++W
Sbjct: 459 CVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 123 (48.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 34/135 (25%), Positives = 55/135 (40%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG--------KPPLRSIKLDNGISFF 508
GH V + D ++ S +D T+K+W KQ + + +IK
Sbjct: 353 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTGPTT 412
Query: 509 RTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
S MLA D TV + D++ L H + FSPD ++L + S D +
Sbjct: 413 SNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLASGSFDKCV 472
Query: 569 RVWDIPSSQLIDCFQ 583
+W+ S L+ +Q
Sbjct: 473 HIWNTQSGSLVHSYQ 487
Score = 68 (29.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 39/153 (25%), Positives = 57/153 (37%)
Query: 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR--QVENQIKKAH---------- 247
FI W PV+ L + SGS +WNL + + Q+ H
Sbjct: 179 FICAWNPVSDL---------LASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGHDVP 229
Query: 248 -RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
K VT + + LL T S D ++W NG L H P +++ N
Sbjct: 230 SNKDVTSLDWNSDGTLLATGSYDGFARIWT-----ENGNLASTLGQHKGPIFALKW--NK 282
Query: 307 SDN-ILSAAGDSTLRIFNTKSETSNKNLGIASA 338
N ILSA D T I++ + + + SA
Sbjct: 283 KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSA 315
Score = 54 (24.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 289 IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETS 329
+ GH + +I + SD + S +GDST RI+N S
Sbjct: 170 VLRGHESEV-FICAWNPVSDLLASGSGDSTARIWNLNENGS 209
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 124 (48.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 34/135 (25%), Positives = 55/135 (40%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG--------KPPLRSIKLDNGISFF 508
GH V + D ++ S +D T+K+W KQ + +IK
Sbjct: 357 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPAT 416
Query: 509 RTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
S MLA D TV + D++ L+ H + FSPD ++L + S D +
Sbjct: 417 SNPNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGKYLASGSFDKCV 476
Query: 569 RVWDIPSSQLIDCFQ 583
+W+ S L+ +Q
Sbjct: 477 HIWNTQSGSLVHSYQ 491
Score = 67 (28.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 49/164 (29%), Positives = 69/164 (42%)
Query: 193 TDESLMEFIQTWGPVTALSFRTDGPPMM----VSGSNTGHLTVWN----LE-DRQVE--- 240
T+ S M T P A+S PP + V+G G + N +E DR VE
Sbjct: 113 TEASAMAKAATMTPA-AIS--QQNPPKIREATVNGEENGAHEINNHSKPMEIDRDVEIPP 169
Query: 241 NQ--IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGR---LLR--IREG- 292
N+ + + H V + LL + S D+T ++W ++ G +LR IREG
Sbjct: 170 NKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGW 229
Query: 293 HSAPPNY-IQFYGNSSDNILSAAG--DSTLRIFNTKSETSNKNL 333
H P N + +SD L A G D RI+ T N NL
Sbjct: 230 HDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIW-----TENGNL 268
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 114 (45.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 37/155 (23%), Positives = 69/155 (44%)
Query: 430 GYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFK 489
G G V+ F +++G + Y D + + + S + + + SG D + ++
Sbjct: 124 GSHVGKVNIFGVETG--KKEYSLDTRGKFILSI--AYSPD-GKYLASGAIDGIINIFDIA 178
Query: 490 QTGK--PPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQL 547
TGK L + F T +S +L DD + I D+ ++ LSGH +
Sbjct: 179 -TGKLLHTLEGHAMPIRSLTFST--DSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWV 235
Query: 548 TDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
+ FSPD +++S D +++VWD+ + + F
Sbjct: 236 LNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTF 270
Score = 70 (29.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 28/123 (22%), Positives = 53/123 (43%)
Query: 215 DGPPMMVSGSNTGHLTVWNLEDRQVENQ-IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLK 273
DG +++SGS + VW D ++E Q + H+ V + ++ +SS D ++
Sbjct: 30 DGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIR 89
Query: 274 LWIFDKADGNGRLLRIREGHSAPPN-YIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKN 332
LW D G +IR + P + + + S ++ + + + IF ET K
Sbjct: 90 LW--DLESGK----QIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGV--ETGKKE 141
Query: 333 LGI 335
+
Sbjct: 142 YSL 144
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 140 (54.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 38/124 (30%), Positives = 63/124 (50%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQ 512
GH+ V V + + +G D+TV++W +Q G S++L G +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-GN----SVRLFTGHRGPVLSLSFSP 478
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
LA +D + + D+ + T+ ++L GH +T FSPDS + +ASMD ++RVWD
Sbjct: 479 NGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWD 538
Query: 573 IPSS 576
I S+
Sbjct: 539 IRST 542
Score = 132 (51.5 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 36/124 (29%), Positives = 58/124 (46%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN--GISFFRTHQES 514
GH V V + SG +D+T ++W F +T PLR I + + + H S
Sbjct: 382 GHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTY--PLR-IYAGHLADVDCVKFHPNS 438
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
+ LA D TV + +R +GH G + FSP+ ++L +A D +++WD+
Sbjct: 439 NYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLA 498
Query: 575 SSQL 578
S L
Sbjct: 499 SGTL 502
Score = 51 (23.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 108 KGHTSPVHL--ILPFGPHLISVDEESNVKVWDI 138
+GH PV+ L L+S E+ +++ WD+
Sbjct: 339 RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL 371
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/207 (24%), Positives = 95/207 (45%)
Query: 124 LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN 183
L+S ++ +KVWD+++ + L +D F C + PS ++I G +
Sbjct: 96 LVSASDDKTLKVWDMRSGKCLKTLKGHSD-FVF-------CCDFNPPS---NLIVSGSFD 144
Query: 184 KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI 243
+ + + + T + L P++A++F +G ++VSGS G +W+ Q +
Sbjct: 145 ESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGS-LIVSGSYDGLCRIWDAASGQCLRTL 203
Query: 244 KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFY 303
V+ F N ++T++ DNTLKLW + + GR L+ GH Y F
Sbjct: 204 ADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSR----GRCLKTYTGHKNE-KYCLFA 258
Query: 304 GNSSDN---ILSAAGDSTLRIFNTKSE 327
S ++S + D+ + I+N +++
Sbjct: 259 SFSVTGRKWVVSGSEDNMVYIWNLQTK 285
Score = 108 (43.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 28/104 (26%), Positives = 57/104 (54%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNII 529
+ +++SG D++VK+W K TGK L+++ + IS + S++ D I
Sbjct: 135 SNLIVSGSFDESVKIWEVK-TGKC-LKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIW 192
Query: 530 DIDTCTIIRKLSGHMGQ-LTDADFSPDSRWLITASMDCTIRVWD 572
D + +R L+ ++ FSP+ ++++TA++D T+++WD
Sbjct: 193 DAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWD 236
Score = 91 (37.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 28/125 (22%), Positives = 58/125 (46%)
Query: 466 VSDNLN-QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG---ISFFRTHQESSMLAVCL 521
V+ N N +++SG D ++W +G+ LR++ D G +SF + +
Sbjct: 171 VNFNCNGSLIVSGSYDGLCRIWD-AASGQC-LRTLA-DEGNPPVSFVKFSPNGKYILTAT 227
Query: 522 DDFTVNIIDIDTCTIIRKLSGHMGQ--LTDADFSPDSR-WLITASMDCTIRVWDIPSSQL 578
D T+ + D ++ +GH + A FS R W+++ S D + +W++ + ++
Sbjct: 228 LDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEI 287
Query: 579 IDCFQ 583
+ Q
Sbjct: 288 VQRLQ 292
Score = 75 (31.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/87 (26%), Positives = 43/87 (49%)
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
H ++ F N L +S+ D + +W DGN + + GHS + + + +S
Sbjct: 38 HSAAISSVKFSPNGEWLASSAADALIIIW--GAYDGNCK--KTLYGHSLEISDVAWSSDS 93
Query: 307 SDNILSAAGDSTLRIFNTKSETSNKNL 333
S ++SA+ D TL++++ +S K L
Sbjct: 94 S-RLVSASDDKTLKVWDMRSGKCLKTL 119
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 105 (42.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 37/142 (26%), Positives = 56/142 (39%)
Query: 457 GHVGGVRGVVSDNLNQ-IVISGGNDQTVKVWHF------KQTGK---PPLRSIKL----- 501
GH V + L + +++G D TVK+W K TG P +
Sbjct: 419 GHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQHCH 478
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLIT 561
D I+ +LA D T + + C ++ SGH L FSP + L T
Sbjct: 479 DKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLAT 538
Query: 562 ASMDCTIRVWDIPSSQLIDCFQ 583
AS D TI++W + + F+
Sbjct: 539 ASADGTIKLWALQDFSCLKTFE 560
Score = 91 (37.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 60/284 (21%), Positives = 114/284 (40%)
Query: 65 LLSVSPQHEDDITC--LSSDFFHIYTSANNII---YAWRRGIDIVGTYKG-HTSPVHLIL 118
L S+ + ++DIT LS D + T++ ++ +AW+ G + +K HT+PV +
Sbjct: 58 LRSLEQEDQEDITAFDLSPDDKVLVTASRALLLAQWAWQEG-SVTRLWKAIHTAPV-ATM 115
Query: 119 PFGPH--LISVDE-ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVD 175
F P L++ + V+VWD+ Y T G + P P
Sbjct: 116 AFDPTSTLLATGGCDGAVRVWDVV--RCY-------GTHHFRGSPGVVHLVAFHPDPARL 166
Query: 176 IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
++ ++ I + ++ L + VT+L+F DG M+ SG + +W+L
Sbjct: 167 LLFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDK-ICVIWDLR 225
Query: 236 DRQVENQIKKAHRKVVTGAHFLYNEPL-----------LVTSSPDNTLKLWIFDKADGNG 284
Q + V A L EP +T+ L++W + A +G
Sbjct: 226 SLQATRTVPVFES--VEAAVLLPEEPAPELGVKSAGLHFLTAGDQGALRVW--EAA--SG 279
Query: 285 RLLRIREGHSAPPNYIQF--YGNSSDNILSAAGDSTLRIFNTKS 326
R + ++ P + +++ +LS D L +++ +S
Sbjct: 280 RCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTADHNLLLYDARS 323
Score = 66 (28.3 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 25/123 (20%), Positives = 50/123 (40%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+TA D ++V+ S L W ++ V K H V F LL T
Sbjct: 69 ITAFDLSPDDK-VLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATG 127
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL-SAAGDSTLRIFNTK 325
D +++W + G G + + F+ + + +L S+A D+++R+++ +
Sbjct: 128 GCDGAVRVWDVVRCYGTHHF----RGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQ 183
Query: 326 SET 328
+
Sbjct: 184 ERS 186
Score = 64 (27.6 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 28/126 (22%), Positives = 57/126 (45%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLED-RQVENQIK-KAHRKVVTGAHFLYNEPLL 263
P L ++ G + +G G L VW R V Q + + + +T + LL
Sbjct: 249 PAPELGVKSAGLHFLTAGDQ-GALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAGLL 307
Query: 264 VTSSPDNTLKLWIFDKADGNGRLLRIRE---GHSAPPNYIQFYGNSSDNILSAAGDSTLR 320
++ + D+ L L+ + R LR+R+ G+S ++F G +++ A+ L+
Sbjct: 308 LSVTADHNLLLY-------DARSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLK 360
Query: 321 IFNTKS 326
+F+ ++
Sbjct: 361 VFDLQT 366
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 103 (41.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 38/142 (26%), Positives = 56/142 (39%)
Query: 457 GHVGGVRGVVSDNLNQ-IVISGGNDQTVKVWHF------KQTGK---PPLRSIKL----- 501
GH V V L + +++G D TVK+W K T P L +
Sbjct: 419 GHTHSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCH 478
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLIT 561
D I+ +LA D T + + C ++ SGH L FSP + L T
Sbjct: 479 DKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLAT 538
Query: 562 ASMDCTIRVWDIPSSQLIDCFQ 583
AS D TI++W + + F+
Sbjct: 539 ASADGTIKLWALQDFSCLKTFE 560
Score = 93 (37.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 63/285 (22%), Positives = 120/285 (42%)
Query: 65 LLSVSPQHEDDITC--LSSDFFHIYTSANNII---YAWRRGIDIVGTYKG-HTSPVHLIL 118
L S+ + ++DIT LS D + T++ ++ +AW+ G + +K HT+PV +
Sbjct: 58 LRSLEQEDQEDITAFDLSPDNEVLVTASRALLLAQWAWQEG-SVTRLWKAIHTAPV-ATM 115
Query: 119 PFGPH--LISVDE-ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVD 175
F P L++ + V+VWDI Y T G + P P
Sbjct: 116 AFDPTSTLLATGGCDGAVRVWDIVRH--Y-------GTHHFRGSPGVVHLVAFHPDPTRL 166
Query: 176 IIGVGLSNKKIILHNILTDESLMEFIQT-WGPVTALSFRTDGPPMMVSGSNTGHLTVWNL 234
++ ++ I + + L D S + + + VT+L+F DG M+ SG + + +W+L
Sbjct: 167 LLFSSATDAAIRVWS-LQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDKICI-IWDL 224
Query: 235 EDRQVENQIKKAHRKVVTGAHFLYNEPL-----------LVTSSPDNTLKLWIFDKADGN 283
+ Q + V A L EP+ +T+ TL++W + A +
Sbjct: 225 QSCQATRTVPVFES--VEAAVLLPEEPVSQLGVKSPGLYFLTAGDQGTLRVW--EAA--S 278
Query: 284 GRLLRIREGHSAPPNYIQF--YGNSSDNILSAAGDSTLRIFNTKS 326
G+ + + P + +++ +L+A D L ++ +S
Sbjct: 279 GQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNLLLYEARS 323
Score = 77 (32.2 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 65/303 (21%), Positives = 113/303 (37%)
Query: 46 LFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCL--SSDFFHIYTSANN-IIYAWRRGID 102
LF + A V+ L+V H +T L S+D + +S + I W D
Sbjct: 168 LFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIW----D 223
Query: 103 IVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN 162
+ T PV + + + EE V +K+ Y + D T ++
Sbjct: 224 LQSCQATRTVPVFESVEAA---VLLPEEP-VSQLGVKSPGLYFLTAGDQGTLRVWEAASG 279
Query: 163 SCV--NVLEPSPVVDIIGVGLSNKK-IIL-----HNILTDE--SLMEFIQTWG-PVTALS 211
CV P P ++ L++ ++L HN+L E SL Q G L
Sbjct: 280 QCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNLLLYEARSLRLQKQFAGYSEEVLD 339
Query: 212 FRTDGPP--MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD 269
R GP +V SN+ L V+ L+ QI H +V L + + D
Sbjct: 340 VRFLGPEDSHVVVASNSPCLKVFELQTSAC--QILHGHTDIVLALDVFRKGWLFASCAKD 397
Query: 270 NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETS 329
++++W +KA G + GH+ + +++ + D T++++
Sbjct: 398 QSVRIWRMNKA-GQVMCVAQGSGHTHSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALL 456
Query: 330 NKN 332
+KN
Sbjct: 457 SKN 459
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 132 (51.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 41/189 (21%), Positives = 78/189 (41%)
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
+ +W + + + + +P+R + + V I+ G F L G G + +++ +G
Sbjct: 40 IIMWKLTRDETN--YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT 97
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
+ GH V V + N+ ++SG D+T+K+W+ K ++ +S
Sbjct: 98 TRRF-----VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS 152
Query: 507 FFRTHQESS--MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
R SS ++ C D V + ++ C + GH G L SPD +
Sbjct: 153 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212
Query: 565 DCTIRVWDI 573
D +WD+
Sbjct: 213 DGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 46/172 (26%), Positives = 75/172 (43%)
Query: 159 KRWNSCVNVLEPSPVV-DIIGVGLSNKKIILHNILTDESLMEFIQTW--GP---VTALSF 212
K N V + +P D+I +K II+ + DE+ Q G V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 213 RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTL 272
+DG +SGS G L +W+L + H K V F + +V+ S D T+
Sbjct: 72 SSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFN 323
KLW G + E HS + ++F NSS+ I+ + G D ++++N
Sbjct: 130 KLW---NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 178
Score = 86 (35.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDRQ---VENQIKKAHRKVVTGAHFLYNE 260
G VT ++ P M++S S + +W L D + + + H V+ +
Sbjct: 16 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG 75
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDST 318
++ S D TL+LW D G R GH+ + F SSDN I+S + D T
Sbjct: 76 QFALSGSWDGTLRLW--DLTTGT--TTRRFVGHTKDVLSVAF---SSDNRQIVSGSRDKT 128
Query: 319 LRIFNT 324
++++NT
Sbjct: 129 IKLWNT 134
Score = 85 (35.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
N I++S G D+ VKVW+ K I ++ + S+ A D + D
Sbjct: 162 NPIIVSCGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Query: 531 IDTCTIIRKLSGHMGQLTDA-DFSPDSRWLITASMDCTIRVWDIPSSQLID 580
++ + L G G + +A FSP+ WL A+ +I++WD+ ++D
Sbjct: 221 LNEGKHLYTLDG--GDIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVD 268
Score = 50 (22.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 105 GTYKGHTSPVHLIL--PFGPHLI-SVDEESNVKVWDIKAEET 143
GT KGH V I P P +I S + + +W + +ET
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET 50
Score = 44 (20.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN-TKSETSNKNLGI 335
+GH+ I D ILSA+ D T+ ++ T+ ET N GI
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET---NYGI 54
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 132 (51.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 41/189 (21%), Positives = 78/189 (41%)
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
+ +W + + + + +P+R + + V I+ G F L G G + +++ +G
Sbjct: 40 IIMWKLTRDETN--YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT 97
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
+ GH V V + N+ ++SG D+T+K+W+ K ++ +S
Sbjct: 98 TRRF-----VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS 152
Query: 507 FFRTHQESS--MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
R SS ++ C D V + ++ C + GH G L SPD +
Sbjct: 153 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212
Query: 565 DCTIRVWDI 573
D +WD+
Sbjct: 213 DGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 46/172 (26%), Positives = 75/172 (43%)
Query: 159 KRWNSCVNVLEPSPVV-DIIGVGLSNKKIILHNILTDESLMEFIQTW--GP---VTALSF 212
K N V + +P D+I +K II+ + DE+ Q G V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 213 RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTL 272
+DG +SGS G L +W+L + H K V F + +V+ S D T+
Sbjct: 72 SSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFN 323
KLW G + E HS + ++F NSS+ I+ + G D ++++N
Sbjct: 130 KLW---NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 178
Score = 86 (35.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDRQ---VENQIKKAHRKVVTGAHFLYNE 260
G VT ++ P M++S S + +W L D + + + H V+ +
Sbjct: 16 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG 75
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDST 318
++ S D TL+LW D G R GH+ + F SSDN I+S + D T
Sbjct: 76 QFALSGSWDGTLRLW--DLTTGT--TTRRFVGHTKDVLSVAF---SSDNRQIVSGSRDKT 128
Query: 319 LRIFNT 324
++++NT
Sbjct: 129 IKLWNT 134
Score = 85 (35.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
N I++S G D+ VKVW+ K I ++ + S+ A D + D
Sbjct: 162 NPIIVSCGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Query: 531 IDTCTIIRKLSGHMGQLTDA-DFSPDSRWLITASMDCTIRVWDIPSSQLID 580
++ + L G G + +A FSP+ WL A+ +I++WD+ ++D
Sbjct: 221 LNEGKHLYTLDG--GDIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVD 268
Score = 50 (22.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 105 GTYKGHTSPVHLIL--PFGPHLI-SVDEESNVKVWDIKAEET 143
GT KGH V I P P +I S + + +W + +ET
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET 50
Score = 44 (20.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN-TKSETSNKNLGI 335
+GH+ I D ILSA+ D T+ ++ T+ ET N GI
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET---NYGI 54
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 132 (51.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 41/189 (21%), Positives = 78/189 (41%)
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
+ +W + + + + +P+R + + V I+ G F L G G + +++ +G
Sbjct: 40 IIMWKLTRDETN--YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT 97
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
+ GH V V + N+ ++SG D+T+K+W+ K ++ +S
Sbjct: 98 TRRF-----VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS 152
Query: 507 FFRTHQESS--MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
R SS ++ C D V + ++ C + GH G L SPD +
Sbjct: 153 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212
Query: 565 DCTIRVWDI 573
D +WD+
Sbjct: 213 DGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 46/172 (26%), Positives = 75/172 (43%)
Query: 159 KRWNSCVNVLEPSPVV-DIIGVGLSNKKIILHNILTDESLMEFIQTW--GP---VTALSF 212
K N V + +P D+I +K II+ + DE+ Q G V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 213 RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTL 272
+DG +SGS G L +W+L + H K V F + +V+ S D T+
Sbjct: 72 SSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFN 323
KLW G + E HS + ++F NSS+ I+ + G D ++++N
Sbjct: 130 KLW---NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 178
Score = 86 (35.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDRQ---VENQIKKAHRKVVTGAHFLYNE 260
G VT ++ P M++S S + +W L D + + + H V+ +
Sbjct: 16 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG 75
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDST 318
++ S D TL+LW D G R GH+ + F SSDN I+S + D T
Sbjct: 76 QFALSGSWDGTLRLW--DLTTGT--TTRRFVGHTKDVLSVAF---SSDNRQIVSGSRDKT 128
Query: 319 LRIFNT 324
++++NT
Sbjct: 129 IKLWNT 134
Score = 85 (35.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
N I++S G D+ VKVW+ K I ++ + S+ A D + D
Sbjct: 162 NPIIVSCGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Query: 531 IDTCTIIRKLSGHMGQLTDA-DFSPDSRWLITASMDCTIRVWDIPSSQLID 580
++ + L G G + +A FSP+ WL A+ +I++WD+ ++D
Sbjct: 221 LNEGKHLYTLDG--GDIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVD 268
Score = 50 (22.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 105 GTYKGHTSPVHLIL--PFGPHLI-SVDEESNVKVWDIKAEET 143
GT KGH V I P P +I S + + +W + +ET
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET 50
Score = 44 (20.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN-TKSETSNKNLGI 335
+GH+ I D ILSA+ D T+ ++ T+ ET N GI
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET---NYGI 54
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 132 (51.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 41/189 (21%), Positives = 78/189 (41%)
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
+ +W + + + + +P+R + + V I+ G F L G G + +++ +G
Sbjct: 40 IIMWKLTRDETN--YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT 97
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
+ GH V V + N+ ++SG D+T+K+W+ K ++ +S
Sbjct: 98 TRRF-----VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS 152
Query: 507 FFRTHQESS--MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
R SS ++ C D V + ++ C + GH G L SPD +
Sbjct: 153 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212
Query: 565 DCTIRVWDI 573
D +WD+
Sbjct: 213 DGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 46/172 (26%), Positives = 75/172 (43%)
Query: 159 KRWNSCVNVLEPSPVV-DIIGVGLSNKKIILHNILTDESLMEFIQTW--GP---VTALSF 212
K N V + +P D+I +K II+ + DE+ Q G V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 213 RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTL 272
+DG +SGS G L +W+L + H K V F + +V+ S D T+
Sbjct: 72 SSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFN 323
KLW G + E HS + ++F NSS+ I+ + G D ++++N
Sbjct: 130 KLW---NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 178
Score = 86 (35.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDRQ---VENQIKKAHRKVVTGAHFLYNE 260
G VT ++ P M++S S + +W L D + + + H V+ +
Sbjct: 16 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG 75
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDST 318
++ S D TL+LW D G R GH+ + F SSDN I+S + D T
Sbjct: 76 QFALSGSWDGTLRLW--DLTTGT--TTRRFVGHTKDVLSVAF---SSDNRQIVSGSRDKT 128
Query: 319 LRIFNT 324
++++NT
Sbjct: 129 IKLWNT 134
Score = 85 (35.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
N I++S G D+ VKVW+ K I ++ + S+ A D + D
Sbjct: 162 NPIIVSCGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Query: 531 IDTCTIIRKLSGHMGQLTDA-DFSPDSRWLITASMDCTIRVWDIPSSQLID 580
++ + L G G + +A FSP+ WL A+ +I++WD+ ++D
Sbjct: 221 LNEGKHLYTLDG--GDIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVD 268
Score = 50 (22.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 105 GTYKGHTSPVHLIL--PFGPHLI-SVDEESNVKVWDIKAEET 143
GT KGH V I P P +I S + + +W + +ET
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET 50
Score = 44 (20.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN-TKSETSNKNLGI 335
+GH+ I D ILSA+ D T+ ++ T+ ET N GI
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET---NYGI 54
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 132 (51.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 41/189 (21%), Positives = 78/189 (41%)
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
+ +W + + + + +P+R + + V I+ G F L G G + +++ +G
Sbjct: 40 IIMWKLTRDETN--YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT 97
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
+ GH V V + N+ ++SG D+T+K+W+ K ++ +S
Sbjct: 98 TRRF-----VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS 152
Query: 507 FFRTHQESS--MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
R SS ++ C D V + ++ C + GH G L SPD +
Sbjct: 153 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212
Query: 565 DCTIRVWDI 573
D +WD+
Sbjct: 213 DGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 46/172 (26%), Positives = 75/172 (43%)
Query: 159 KRWNSCVNVLEPSPVV-DIIGVGLSNKKIILHNILTDESLMEFIQTW--GP---VTALSF 212
K N V + +P D+I +K II+ + DE+ Q G V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 213 RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTL 272
+DG +SGS G L +W+L + H K V F + +V+ S D T+
Sbjct: 72 SSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFN 323
KLW G + E HS + ++F NSS+ I+ + G D ++++N
Sbjct: 130 KLW---NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 178
Score = 86 (35.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDRQ---VENQIKKAHRKVVTGAHFLYNE 260
G VT ++ P M++S S + +W L D + + + H V+ +
Sbjct: 16 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG 75
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDST 318
++ S D TL+LW D G R GH+ + F SSDN I+S + D T
Sbjct: 76 QFALSGSWDGTLRLW--DLTTGT--TTRRFVGHTKDVLSVAF---SSDNRQIVSGSRDKT 128
Query: 319 LRIFNT 324
++++NT
Sbjct: 129 IKLWNT 134
Score = 85 (35.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
N I++S G D+ VKVW+ K I ++ + S+ A D + D
Sbjct: 162 NPIIVSCGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Query: 531 IDTCTIIRKLSGHMGQLTDA-DFSPDSRWLITASMDCTIRVWDIPSSQLID 580
++ + L G G + +A FSP+ WL A+ +I++WD+ ++D
Sbjct: 221 LNEGKHLYTLDG--GDIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVD 268
Score = 50 (22.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 105 GTYKGHTSPVHLIL--PFGPHLI-SVDEESNVKVWDIKAEET 143
GT KGH V I P P +I S + + +W + +ET
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET 50
Score = 44 (20.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN-TKSETSNKNLGI 335
+GH+ I D ILSA+ D T+ ++ T+ ET N GI
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET---NYGI 54
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 132 (51.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 41/189 (21%), Positives = 78/189 (41%)
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
+ +W + + + + +P+R + + V I+ G F L G G + +++ +G
Sbjct: 40 IIMWKLTRDETN--YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT 97
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
+ GH V V + N+ ++SG D+T+K+W+ K ++ +S
Sbjct: 98 TRRF-----VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS 152
Query: 507 FFRTHQESS--MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
R SS ++ C D V + ++ C + GH G L SPD +
Sbjct: 153 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212
Query: 565 DCTIRVWDI 573
D +WD+
Sbjct: 213 DGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 46/172 (26%), Positives = 75/172 (43%)
Query: 159 KRWNSCVNVLEPSPVV-DIIGVGLSNKKIILHNILTDESLMEFIQTW--GP---VTALSF 212
K N V + +P D+I +K II+ + DE+ Q G V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 213 RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTL 272
+DG +SGS G L +W+L + H K V F + +V+ S D T+
Sbjct: 72 SSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFN 323
KLW G + E HS + ++F NSS+ I+ + G D ++++N
Sbjct: 130 KLW---NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 178
Score = 86 (35.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDRQ---VENQIKKAHRKVVTGAHFLYNE 260
G VT ++ P M++S S + +W L D + + + H V+ +
Sbjct: 16 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG 75
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDST 318
++ S D TL+LW D G R GH+ + F SSDN I+S + D T
Sbjct: 76 QFALSGSWDGTLRLW--DLTTGT--TTRRFVGHTKDVLSVAF---SSDNRQIVSGSRDKT 128
Query: 319 LRIFNT 324
++++NT
Sbjct: 129 IKLWNT 134
Score = 85 (35.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
N I++S G D+ VKVW+ K I ++ + S+ A D + D
Sbjct: 162 NPIIVSCGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Query: 531 IDTCTIIRKLSGHMGQLTDA-DFSPDSRWLITASMDCTIRVWDIPSSQLID 580
++ + L G G + +A FSP+ WL A+ +I++WD+ ++D
Sbjct: 221 LNEGKHLYTLDG--GDIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVD 268
Score = 50 (22.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 105 GTYKGHTSPVHLIL--PFGPHLI-SVDEESNVKVWDIKAEET 143
GT KGH V I P P +I S + + +W + +ET
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET 50
Score = 44 (20.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN-TKSETSNKNLGI 335
+GH+ I D ILSA+ D T+ ++ T+ ET N GI
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET---NYGI 54
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 132 (51.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 41/189 (21%), Positives = 78/189 (41%)
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
+ +W + + + + +P+R + + V I+ G F L G G + +++ +G
Sbjct: 40 IIMWKLTRDETN--YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT 97
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
+ GH V V + N+ ++SG D+T+K+W+ K ++ +S
Sbjct: 98 TRRF-----VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS 152
Query: 507 FFRTHQESS--MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
R SS ++ C D V + ++ C + GH G L SPD +
Sbjct: 153 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212
Query: 565 DCTIRVWDI 573
D +WD+
Sbjct: 213 DGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 46/172 (26%), Positives = 75/172 (43%)
Query: 159 KRWNSCVNVLEPSPVV-DIIGVGLSNKKIILHNILTDESLMEFIQTW--GP---VTALSF 212
K N V + +P D+I +K II+ + DE+ Q G V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 213 RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTL 272
+DG +SGS G L +W+L + H K V F + +V+ S D T+
Sbjct: 72 SSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFN 323
KLW G + E HS + ++F NSS+ I+ + G D ++++N
Sbjct: 130 KLW---NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 178
Score = 86 (35.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDRQ---VENQIKKAHRKVVTGAHFLYNE 260
G VT ++ P M++S S + +W L D + + + H V+ +
Sbjct: 16 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG 75
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDST 318
++ S D TL+LW D G R GH+ + F SSDN I+S + D T
Sbjct: 76 QFALSGSWDGTLRLW--DLTTGT--TTRRFVGHTKDVLSVAF---SSDNRQIVSGSRDKT 128
Query: 319 LRIFNT 324
++++NT
Sbjct: 129 IKLWNT 134
Score = 85 (35.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
N I++S G D+ VKVW+ K I ++ + S+ A D + D
Sbjct: 162 NPIIVSCGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Query: 531 IDTCTIIRKLSGHMGQLTDA-DFSPDSRWLITASMDCTIRVWDIPSSQLID 580
++ + L G G + +A FSP+ WL A+ +I++WD+ ++D
Sbjct: 221 LNEGKHLYTLDG--GDIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVD 268
Score = 50 (22.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 105 GTYKGHTSPVHLIL--PFGPHLI-SVDEESNVKVWDIKAEET 143
GT KGH V I P P +I S + + +W + +ET
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET 50
Score = 44 (20.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN-TKSETSNKNLGI 335
+GH+ I D ILSA+ D T+ ++ T+ ET N GI
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET---NYGI 54
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 132 (51.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 41/189 (21%), Positives = 78/189 (41%)
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
+ +W + + + + +P+R + + V I+ G F L G G + +++ +G
Sbjct: 40 IIMWKLTRDETN--YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT 97
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
+ GH V V + N+ ++SG D+T+K+W+ K ++ +S
Sbjct: 98 TRRF-----VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS 152
Query: 507 FFRTHQESS--MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
R SS ++ C D V + ++ C + GH G L SPD +
Sbjct: 153 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212
Query: 565 DCTIRVWDI 573
D +WD+
Sbjct: 213 DGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 46/172 (26%), Positives = 75/172 (43%)
Query: 159 KRWNSCVNVLEPSPVV-DIIGVGLSNKKIILHNILTDESLMEFIQTW--GP---VTALSF 212
K N V + +P D+I +K II+ + DE+ Q G V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 213 RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTL 272
+DG +SGS G L +W+L + H K V F + +V+ S D T+
Sbjct: 72 SSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFN 323
KLW G + E HS + ++F NSS+ I+ + G D ++++N
Sbjct: 130 KLW---NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 178
Score = 86 (35.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDRQ---VENQIKKAHRKVVTGAHFLYNE 260
G VT ++ P M++S S + +W L D + + + H V+ +
Sbjct: 16 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG 75
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDST 318
++ S D TL+LW D G R GH+ + F SSDN I+S + D T
Sbjct: 76 QFALSGSWDGTLRLW--DLTTGT--TTRRFVGHTKDVLSVAF---SSDNRQIVSGSRDKT 128
Query: 319 LRIFNT 324
++++NT
Sbjct: 129 IKLWNT 134
Score = 85 (35.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
N I++S G D+ VKVW+ K I ++ + S+ A D + D
Sbjct: 162 NPIIVSCGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Query: 531 IDTCTIIRKLSGHMGQLTDA-DFSPDSRWLITASMDCTIRVWDIPSSQLID 580
++ + L G G + +A FSP+ WL A+ +I++WD+ ++D
Sbjct: 221 LNEGKHLYTLDG--GDIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVD 268
Score = 50 (22.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 105 GTYKGHTSPVHLIL--PFGPHLI-SVDEESNVKVWDIKAEET 143
GT KGH V I P P +I S + + +W + +ET
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET 50
Score = 44 (20.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN-TKSETSNKNLGI 335
+GH+ I D ILSA+ D T+ ++ T+ ET N GI
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET---NYGI 54
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 132 (51.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 41/189 (21%), Positives = 78/189 (41%)
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
+ +W + + + + +P+R + + V I+ G F L G G + +++ +G
Sbjct: 40 IIMWKLTRDETN--YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT 97
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
+ GH V V + N+ ++SG D+T+K+W+ K ++ +S
Sbjct: 98 TRRF-----VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS 152
Query: 507 FFRTHQESS--MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
R SS ++ C D V + ++ C + GH G L SPD +
Sbjct: 153 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212
Query: 565 DCTIRVWDI 573
D +WD+
Sbjct: 213 DGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 46/172 (26%), Positives = 75/172 (43%)
Query: 159 KRWNSCVNVLEPSPVV-DIIGVGLSNKKIILHNILTDESLMEFIQTW--GP---VTALSF 212
K N V + +P D+I +K II+ + DE+ Q G V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 213 RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTL 272
+DG +SGS G L +W+L + H K V F + +V+ S D T+
Sbjct: 72 SSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFN 323
KLW G + E HS + ++F NSS+ I+ + G D ++++N
Sbjct: 130 KLW---NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 178
Score = 86 (35.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDRQ---VENQIKKAHRKVVTGAHFLYNE 260
G VT ++ P M++S S + +W L D + + + H V+ +
Sbjct: 16 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG 75
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDST 318
++ S D TL+LW D G R GH+ + F SSDN I+S + D T
Sbjct: 76 QFALSGSWDGTLRLW--DLTTGT--TTRRFVGHTKDVLSVAF---SSDNRQIVSGSRDKT 128
Query: 319 LRIFNT 324
++++NT
Sbjct: 129 IKLWNT 134
Score = 85 (35.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
N I++S G D+ VKVW+ K I ++ + S+ A D + D
Sbjct: 162 NPIIVSCGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Query: 531 IDTCTIIRKLSGHMGQLTDA-DFSPDSRWLITASMDCTIRVWDIPSSQLID 580
++ + L G G + +A FSP+ WL A+ +I++WD+ ++D
Sbjct: 221 LNEGKHLYTLDG--GDIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVD 268
Score = 50 (22.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 105 GTYKGHTSPVHLIL--PFGPHLI-SVDEESNVKVWDIKAEET 143
GT KGH V I P P +I S + + +W + +ET
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET 50
Score = 44 (20.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN-TKSETSNKNLGI 335
+GH+ I D ILSA+ D T+ ++ T+ ET N GI
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET---NYGI 54
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 132 (51.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 41/189 (21%), Positives = 78/189 (41%)
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
+ +W + + + + +P+R + + V I+ G F L G G + +++ +G
Sbjct: 40 IIMWKLTRDETN--YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT 97
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
+ GH V V + N+ ++SG D+T+K+W+ K ++ +S
Sbjct: 98 TRRF-----VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS 152
Query: 507 FFRTHQESS--MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
R SS ++ C D V + ++ C + GH G L SPD +
Sbjct: 153 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212
Query: 565 DCTIRVWDI 573
D +WD+
Sbjct: 213 DGQAMLWDL 221
Score = 97 (39.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 46/172 (26%), Positives = 75/172 (43%)
Query: 159 KRWNSCVNVLEPSPVV-DIIGVGLSNKKIILHNILTDESLMEFIQTW--GP---VTALSF 212
K N V + +P D+I +K II+ + DE+ Q G V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 213 RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTL 272
+DG +SGS G L +W+L + H K V F + +V+ S D T+
Sbjct: 72 SSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFN 323
KLW G + E HS + ++F NSS+ I+ + G D ++++N
Sbjct: 130 KLW---NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 178
Score = 86 (35.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDRQ---VENQIKKAHRKVVTGAHFLYNE 260
G VT ++ P M++S S + +W L D + + + H V+ +
Sbjct: 16 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG 75
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDST 318
++ S D TL+LW D G R GH+ + F SSDN I+S + D T
Sbjct: 76 QFALSGSWDGTLRLW--DLTTGT--TTRRFVGHTKDVLSVAF---SSDNRQIVSGSRDKT 128
Query: 319 LRIFNT 324
++++NT
Sbjct: 129 IKLWNT 134
Score = 85 (35.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
N I++S G D+ VKVW+ K I ++ + S+ A D + D
Sbjct: 162 NPIIVSCGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Query: 531 IDTCTIIRKLSGHMGQLTDA-DFSPDSRWLITASMDCTIRVWDIPSSQLID 580
++ + L G G + +A FSP+ WL A+ +I++WD+ ++D
Sbjct: 221 LNEGKHLYTLDG--GDIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVD 268
Score = 50 (22.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 105 GTYKGHTSPVHLIL--PFGPHLI-SVDEESNVKVWDIKAEET 143
GT KGH V I P P +I S + + +W + +ET
Sbjct: 9 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET 50
Score = 44 (20.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN-TKSETSNKNLGI 335
+GH+ I D ILSA+ D T+ ++ T+ ET N GI
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET---NYGI 54
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 119 (46.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 34/140 (24%), Positives = 62/140 (44%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRT-- 510
GH V + D ++ S +D T+K+W KQ + ++ N I + T
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSC--VHDLQAHNKEIYTIKWSPTGP 404
Query: 511 ---HQESSMLAVCLD----DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS 563
+ ++++ LD D TV + D+D I L+ H + FSPD R+L + S
Sbjct: 405 GTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGS 464
Query: 564 MDCTIRVWDIPSSQLIDCFQ 583
D + +W+ + L+ ++
Sbjct: 465 FDKCVHIWNTQTGALVHSYR 484
Score = 71 (30.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 43/169 (25%), Positives = 62/169 (36%)
Query: 183 NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN- 241
NK ++L ES + FI W PV+ L + SGS +WNL +
Sbjct: 160 NKAVVLRG---HESEV-FICAWNPVSDL---------LASGSGDSTARIWNLSENSTSGS 206
Query: 242 -QIKKAH-----------RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI 289
Q+ H K VT + LL T S D ++W DGN L
Sbjct: 207 TQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT---KDGN---LAS 260
Query: 290 REGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
G P + + + ILSA D T I++ + + + SA
Sbjct: 261 TLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSA 309
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 132 (51.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 41/189 (21%), Positives = 78/189 (41%)
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
+ +W + + + + +P+R + + V I+ G F L G G + +++ +G
Sbjct: 43 IIMWKLTRDETN--YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT 100
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
+ GH V V + N+ ++SG D+T+K+W+ K ++ +S
Sbjct: 101 TRRF-----VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS 155
Query: 507 FFRTHQESS--MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
R SS ++ C D V + ++ C + GH G L SPD +
Sbjct: 156 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 215
Query: 565 DCTIRVWDI 573
D +WD+
Sbjct: 216 DGQAMLWDL 224
Score = 97 (39.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 46/172 (26%), Positives = 75/172 (43%)
Query: 159 KRWNSCVNVLEPSPVV-DIIGVGLSNKKIILHNILTDESLMEFIQTW--GP---VTALSF 212
K N V + +P D+I +K II+ + DE+ Q G V+ +
Sbjct: 15 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 74
Query: 213 RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTL 272
+DG +SGS G L +W+L + H K V F + +V+ S D T+
Sbjct: 75 SSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTI 132
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFN 323
KLW G + E HS + ++F NSS+ I+ + G D ++++N
Sbjct: 133 KLW---NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 181
Score = 86 (35.3 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDRQ---VENQIKKAHRKVVTGAHFLYNE 260
G VT ++ P M++S S + +W L D + + + H V+ +
Sbjct: 19 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG 78
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDST 318
++ S D TL+LW D G R GH+ + F SSDN I+S + D T
Sbjct: 79 QFALSGSWDGTLRLW--DLTTGT--TTRRFVGHTKDVLSVAF---SSDNRQIVSGSRDKT 131
Query: 319 LRIFNT 324
++++NT
Sbjct: 132 IKLWNT 137
Score = 85 (35.0 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
N I++S G D+ VKVW+ K I ++ + S+ A D + D
Sbjct: 165 NPIIVSCGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 223
Query: 531 IDTCTIIRKLSGHMGQLTDA-DFSPDSRWLITASMDCTIRVWDIPSSQLID 580
++ + L G G + +A FSP+ WL A+ +I++WD+ ++D
Sbjct: 224 LNEGKHLYTLDG--GDIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVD 271
Score = 50 (22.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 105 GTYKGHTSPVHLIL--PFGPHLI-SVDEESNVKVWDIKAEET 143
GT KGH V I P P +I S + + +W + +ET
Sbjct: 12 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET 53
Score = 44 (20.5 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN-TKSETSNKNLGI 335
+GH+ I D ILSA+ D T+ ++ T+ ET N GI
Sbjct: 15 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET---NYGI 57
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 118 (46.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 32/109 (29%), Positives = 57/109 (52%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF--LYNEPLLVTSSPDNTLKLWIF 277
+ SGS + +W+ E ++E +K H + V+G + LL + S D T+KLW
Sbjct: 129 LASGSEDCTIKIWDWELGEIERTLK-GHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDP 187
Query: 278 DKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
K N R L GH + ++F ++ ++++SA+ D TLRI++ +
Sbjct: 188 SKDYANIRTL---SGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVST 233
Score = 70 (29.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+I+ L GH + F P ++L + S D TIR WD+
Sbjct: 341 LIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDL 378
Score = 61 (26.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK 493
GH VRG+V + + S +D+T++ W Q G+
Sbjct: 347 GHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQEGR 383
Score = 53 (23.7 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 17/73 (23%), Positives = 35/73 (47%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIID 530
+ V +G D+T+K+W + G+ ++++ DN + H L DD T+ D
Sbjct: 321 EFVATGARDKTIKLWEAR--GRL-IKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWD 377
Query: 531 IDT-CTIIRKLSG 542
+ +++ +SG
Sbjct: 378 LSQEGRLVKTISG 390
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 118 (46.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 32/109 (29%), Positives = 57/109 (52%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF--LYNEPLLVTSSPDNTLKLWIF 277
+ SGS + +W+ E ++E +K H + V+G + LL + S D T+KLW
Sbjct: 129 LASGSEDCTIKIWDWELGEIERTLK-GHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDP 187
Query: 278 DKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
K N R L GH + ++F ++ ++++SA+ D TLRI++ +
Sbjct: 188 SKDYANIRTL---SGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVST 233
Score = 70 (29.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+I+ L GH + F P ++L + S D TIR WD+
Sbjct: 341 LIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDL 378
Score = 61 (26.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK 493
GH VRG+V + + S +D+T++ W Q G+
Sbjct: 347 GHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQEGR 383
Score = 53 (23.7 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 17/73 (23%), Positives = 35/73 (47%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIID 530
+ V +G D+T+K+W + G+ ++++ DN + H L DD T+ D
Sbjct: 321 EFVATGARDKTIKLWEAR--GRL-IKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWD 377
Query: 531 IDT-CTIIRKLSG 542
+ +++ +SG
Sbjct: 378 LSQEGRLVKTISG 390
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 30/124 (24%), Positives = 59/124 (47%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG-KPPLRSIKLDNGISFFRTHQESS 515
GH + V + + + D+TVK+W+ + L KL G++ F +S
Sbjct: 77 GHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKL--GVNDFAWSADSK 134
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+ DD T+ I ++ T + + L GH + +F+P S +++ S D ++R+WD+ +
Sbjct: 135 SIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRT 194
Query: 576 SQLI 579
+
Sbjct: 195 GMCV 198
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 64/272 (23%), Positives = 112/272 (41%)
Query: 63 FKLLSVSPQHEDDITCLSSD---FFHIYTSANNIIYAWRRG-IDIVGTYKGHTSPVHLIL 118
+KL+S H I+ + F +SA+ + W + T GH V+
Sbjct: 69 YKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVN--- 125
Query: 119 PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGK-RWNSCVNVLEPSPVVDII 177
F S D +S V D K + Y E+ + G + C N +P ++
Sbjct: 126 DFA---WSADSKSIVTASDDKTLKIY-EVPTVKMAKTLKGHTNYVFCCNF---NPQSSLV 178
Query: 178 GVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR 237
G ++ + + ++ T + PV+A+SF DG ++ SGS G + +W+ +
Sbjct: 179 VSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGS-LITSGSYDGLVRIWDTANG 237
Query: 238 QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPP 297
Q + V F N +++S+ DNTLKLW F G G+ L+ +GH
Sbjct: 238 QCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDF----GKGKTLKQYQGHENNK 293
Query: 298 NYI--QFYGNSSDNILSAAGDSTLRIFNTKSE 327
I F I+S + D + ++N +++
Sbjct: 294 YCIFANFSVTGGKWIISGSEDCKIYVWNLQTK 325
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 133 (51.9 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 33/125 (26%), Positives = 60/125 (48%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK--PPLRSIKLDNGISFFRTHQES 514
GH V V + + S D+ +K+W GK + KL GIS +S
Sbjct: 17 GHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDGKFEKTISGHKL--GISDVAWSSDS 73
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
++L DD T+ I D+ + ++ L GH + +F+P S +++ S D ++R+WD+
Sbjct: 74 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 133
Query: 575 SSQLI 579
+ + +
Sbjct: 134 TGKCL 138
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 36/137 (26%), Positives = 66/137 (48%)
Query: 444 GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN 503
GA+ G + GH G+ V + + +++S +D+T+K+W +GK L+++K +
Sbjct: 47 GAYDGKF-EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS-SGKC-LKTLKGHS 103
Query: 504 GISFFRTHQESSMLAVCLD-DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITA 562
F S L V D +V I D+ T ++ L H ++ F+ D ++++
Sbjct: 104 NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 163
Query: 563 SMDCTIRVWDIPSSQLI 579
S D R+WD S Q +
Sbjct: 164 SYDGLCRIWDTASGQCL 180
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 49/207 (23%), Positives = 90/207 (43%)
Query: 124 LISVDEESNVKVWDIKAEETYLELS-FDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS 182
L+S ++ +K+WD+ + + L N F C N +P ++I G
Sbjct: 76 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF---------CCNF---NPQSNLIVSGSF 123
Query: 183 NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242
++ + + ++ T + L PV+A+ F DG ++VS S G +W+ Q
Sbjct: 124 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKT 182
Query: 243 IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI-- 300
+ V+ F N ++ ++ DNTLKLW + K G+ L+ GH I
Sbjct: 183 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK----GKCLKTYTGHKNEKYCIFA 238
Query: 301 QFYGNSSDNILSAAGDSTLRIFNTKSE 327
F I+S + D+ + I+N +++
Sbjct: 239 NFSVTGGKWIVSGSEDNLVYIWNLQTK 265
Score = 100 (40.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 24/114 (21%), Positives = 60/114 (52%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNII 529
+ +++SG D++V++W K TGK L+++ + +S +++ S++ D I
Sbjct: 115 SNLIVSGSFDESVRIWDVK-TGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 172
Query: 530 DIDTCTIIRKL-SGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
D + ++ L ++ FSP+ ++++ A++D T+++WD + + +
Sbjct: 173 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 226
Score = 93 (37.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 29/133 (21%), Positives = 60/133 (45%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQES 514
P H V V + +++S D ++W +G+ I DN +SF +
Sbjct: 142 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSFVKFSPNG 200
Query: 515 S-MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ--LTDADFS-PDSRWLITASMDCTIRV 570
+LA LD+ T+ + D ++ +GH + A+FS +W+++ S D + +
Sbjct: 201 KYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 259
Query: 571 WDIPSSQLIDCFQ 583
W++ + +++ Q
Sbjct: 260 WNLQTKEIVQKLQ 272
Score = 84 (34.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLW-IFDKADGNGRLLRIREGHSAPPNYIQFYGN 305
H K V+ F N L +SS D +K+W +D G+ + GH + + + +
Sbjct: 18 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKLGISDVA-WSS 71
Query: 306 SSDNILSAAGDSTLRIFNTKSETSNKNL 333
S+ ++SA+ D TL+I++ S K L
Sbjct: 72 DSNLLVSASDDKTLKIWDVSSGKCLKTL 99
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 107 (42.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 30/110 (27%), Positives = 51/110 (46%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNII 529
N ++S D TVKVW+ TGK + G + + S + D T I
Sbjct: 1057 NSKLLSWSFDGTVKVWNIT-TGKTE-KDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIW 1114
Query: 530 DIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
++ +++ +L GH + + FSP ++ L T IR+WDI + +L+
Sbjct: 1115 SFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELL 1164
Score = 97 (39.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 28/108 (25%), Positives = 49/108 (45%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531
Q +IS +D ++VW+++ L+ K I F + S +L+ D TV + +I
Sbjct: 1018 QTLISSAHDAVIQVWNWQLNECVFLKGHK--EAIKDFAFLENSKLLSWSFDG-TVKVWNI 1074
Query: 532 DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
T + + H G + SPD + S D T ++W SS ++
Sbjct: 1075 TTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVL 1122
Score = 92 (37.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/111 (23%), Positives = 53/111 (47%)
Query: 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTD-GPPMMVSGSNTGHLTVWNLEDRQVE 240
++KK+ + N T + L + + V F G ++ + S+ ++ +W+L+D+
Sbjct: 676 ADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCR 735
Query: 241 NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE 291
N + H V+ F N+ + + S D T+KLW A+ R + I++
Sbjct: 736 NTMF-GHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSAN-ELRTIEIKD 784
Score = 85 (35.0 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 53/242 (21%), Positives = 97/242 (40%)
Query: 94 IYAWR-RGIDIVGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFD 150
I W + + V +GHTS VH + G ++ E+ +++W ET
Sbjct: 863 IELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIW-----ET------- 910
Query: 151 NDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTAL 210
N K S ++V+ + V I+ + + K I L N TD +M+ +
Sbjct: 911 NKVCKSSDAVLKSELDVVFHNGEVMILAI-YNQKHIQLINGNTDSIIMQTEPQESLICCC 969
Query: 211 SFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDN 270
D G G + V L D +V ++A+R V F + L++S+ D
Sbjct: 970 CLSED-LKFAAFGQENGAIKVLRLLDGRVLTS-REAYRTSVQHCRFTTDCQTLISSAHDA 1027
Query: 271 TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
+++W + + +GH F NS +LS + D T++++N + +
Sbjct: 1028 VIQVWNWQLNE-----CVFLKGHKEAIKDFAFLENSK--LLSWSFDGTVKVWNITTGKTE 1080
Query: 331 KN 332
K+
Sbjct: 1081 KD 1082
Score = 85 (35.0 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 52/245 (21%), Positives = 93/245 (37%)
Query: 49 TC-VGKAFHVYGCNHFKLLSVSPQHEDDITCLS-----SDFFHIYTSANNIIYAWR-RGI 101
TC K ++ K L V +H + + C + S + I W +
Sbjct: 673 TCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDK 732
Query: 102 DIVGTYKGHTSPV-HL-ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGK 159
T GH + V H P ++ S + VK+W++ + + D F+ +
Sbjct: 733 YCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEI-KDFFRNADE 791
Query: 160 RWNSCVNVLEP----SPVVDIIGVGLSNKKIILHNILTDESLME-FIQTWGPVTALSFRT 214
+ + V VL S D I V NK ++L ++ T L + I + F
Sbjct: 792 QQDD-VEVLVKCCSWSRSSDTILVVAKNK-LLLFDVTTSNLLTQVIISHHSTIQYCDFCA 849
Query: 215 DGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKL 274
+ V+ S+ + +WN++ + H V F + L +TSS D T+++
Sbjct: 850 GDELVAVALSHCS-IELWNIKSLSKVADCR-GHTSWVHCVTFSSDGSLFLTSSEDQTIRI 907
Query: 275 WIFDK 279
W +K
Sbjct: 908 WETNK 912
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 107 (42.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 30/110 (27%), Positives = 51/110 (46%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNII 529
N ++S D TVKVW+ TGK + G + + S + D T I
Sbjct: 1058 NSKLLSWSFDGTVKVWNIT-TGKTE-KDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIW 1115
Query: 530 DIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
++ +++ +L GH + + FSP ++ L T IR+WDI + +L+
Sbjct: 1116 SFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELL 1165
Score = 97 (39.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 28/108 (25%), Positives = 49/108 (45%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531
Q +IS +D ++VW+++ L+ K I F + S +L+ D TV + +I
Sbjct: 1019 QTLISSAHDAVIQVWNWQLNECVFLKGHK--EAIKDFAFLENSKLLSWSFDG-TVKVWNI 1075
Query: 532 DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
T + + H G + SPD + S D T ++W SS ++
Sbjct: 1076 TTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVL 1123
Score = 92 (37.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/111 (23%), Positives = 53/111 (47%)
Query: 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTD-GPPMMVSGSNTGHLTVWNLEDRQVE 240
++KK+ + N T + L + + V F G ++ + S+ ++ +W+L+D+
Sbjct: 677 ADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCR 736
Query: 241 NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE 291
N + H V+ F N+ + + S D T+KLW A+ R + I++
Sbjct: 737 NTMF-GHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSAN-ELRTIEIKD 785
Score = 85 (35.0 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 53/242 (21%), Positives = 97/242 (40%)
Query: 94 IYAWR-RGIDIVGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFD 150
I W + + V +GHTS VH + G ++ E+ +++W ET
Sbjct: 864 IELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIW-----ET------- 911
Query: 151 NDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTAL 210
N K S ++V+ + V I+ + + K I L N TD +M+ +
Sbjct: 912 NKVCKSSDAVLKSELDVVFHNGEVMILAI-YNQKHIQLINGNTDSIIMQTEPQESLICCC 970
Query: 211 SFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDN 270
D G G + V L D +V ++A+R V F + L++S+ D
Sbjct: 971 CLSED-LKFAAFGQENGAIKVLRLLDGRVLTS-REAYRTSVQHCRFTTDCQTLISSAHDA 1028
Query: 271 TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
+++W + + +GH F NS +LS + D T++++N + +
Sbjct: 1029 VIQVWNWQLNE-----CVFLKGHKEAIKDFAFLENSK--LLSWSFDGTVKVWNITTGKTE 1081
Query: 331 KN 332
K+
Sbjct: 1082 KD 1083
Score = 85 (35.0 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 52/245 (21%), Positives = 93/245 (37%)
Query: 49 TC-VGKAFHVYGCNHFKLLSVSPQHEDDITCLS-----SDFFHIYTSANNIIYAWR-RGI 101
TC K ++ K L V +H + + C + S + I W +
Sbjct: 674 TCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDK 733
Query: 102 DIVGTYKGHTSPV-HL-ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGK 159
T GH + V H P ++ S + VK+W++ + + D F+ +
Sbjct: 734 YCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEI-KDFFRNADE 792
Query: 160 RWNSCVNVLEP----SPVVDIIGVGLSNKKIILHNILTDESLME-FIQTWGPVTALSFRT 214
+ + V VL S D I V NK ++L ++ T L + I + F
Sbjct: 793 QQDD-VEVLVKCCSWSRSSDTILVVAKNK-LLLFDVTTSNLLTQVIISHHSTIQYCDFCA 850
Query: 215 DGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKL 274
+ V+ S+ + +WN++ + H V F + L +TSS D T+++
Sbjct: 851 GDELVAVALSHCS-IELWNIKSLSKVADCR-GHTSWVHCVTFSSDGSLFLTSSEDQTIRI 908
Query: 275 WIFDK 279
W +K
Sbjct: 909 WETNK 913
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 131 (51.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 41/187 (21%), Positives = 77/187 (41%)
Query: 389 LWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRG 448
+W + + + + +P+R + + V I+ G F L G G + +++ +G
Sbjct: 1 MWKLTRDETN--YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR 58
Query: 449 SYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFF 508
+ GH V V + N+ ++SG D+T+K+W+ K ++ +S
Sbjct: 59 RF-----VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCV 113
Query: 509 RTHQESS--MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDC 566
R SS ++ C D V + ++ C + GH G L SPD + D
Sbjct: 114 RFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 173
Query: 567 TIRVWDI 573
+WD+
Sbjct: 174 QAMLWDL 180
>MGI|MGI:1920933 [details] [associations]
symbol:Atg16l2 "autophagy related 16-like 2 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920933 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031
eggNOG:COG2319 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000112569 HOVERGEN:HBG050534
InterPro:IPR013923 Pfam:PF08614 GO:GO:0006914 CTD:89849
OrthoDB:EOG44F68R EMBL:AK131109 EMBL:AC107638 EMBL:BC060054
IPI:IPI00755633 IPI:IPI00895049 RefSeq:NP_001104581.1
UniGene:Mm.275744 ProteinModelPortal:Q6KAU8 SMR:Q6KAU8
PhosphoSite:Q6KAU8 PRIDE:Q6KAU8 Ensembl:ENSMUST00000120267
Ensembl:ENSMUST00000139609 Ensembl:ENSMUST00000143630 GeneID:73683
KEGG:mmu:73683 UCSC:uc009iof.2 InParanoid:Q6KAU8 OMA:QGPHCTA
NextBio:338795 Bgee:Q6KAU8 Genevestigator:Q6KAU8 Uniprot:Q6KAU8
Length = 623
Score = 106 (42.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
+ I+ISG NDQ ++ W + G ++ I + ++ + L C D T+ +ID
Sbjct: 477 DHIIISGHNDQKIRFWDSR--GPHCIQVIPVQGRVTSLHLSYDQLHLLSCSRDNTLKVID 534
Query: 531 IDTCTI--IRKLSGHM--GQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ I + + G T A FSPD + + S + + +WD+ + +L
Sbjct: 535 LRISNIRQVFRADGFKCSSDWTKAVFSPDRSYALAGSSNGDLYIWDVNTGKL 586
Score = 86 (35.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTW----GPVTALSFRTDGPPMM 220
VN + P ++ G +++ I L N++ +E QT G +T++ F G ++
Sbjct: 343 VNAVCFGPNSSLLATGGADRLIHLWNVVGGR--LEANQTLEGAGGSITSVDFDPSGSQVL 400
Query: 221 VSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA 280
+ N +W + + Q + + H+ VT A F VT S D T+K W +A
Sbjct: 401 AATYNQA-AQLWKVGETQSKETLS-GHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRA 458
>UNIPROTKB|F1NF00 [details] [associations]
symbol:GNB1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0035176 "social
behavior" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 OMA:HEEPVMD
GeneTree:ENSGT00390000018606 EMBL:AADN02034786 IPI:IPI00587443
Ensembl:ENSGALT00000002979 Uniprot:F1NF00
Length = 328
Score = 95 (38.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 28/84 (33%), Positives = 41/84 (48%)
Query: 203 TWGPVTALSFRTDG--P--PMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLY 258
T V AL F G P P++ SGS G + VWNL+ +V+ + RK V G +
Sbjct: 15 TGAAVHALHFSCGGGEPDIPVLFSGSENGFIHVWNLKTHRVDAALDGHGRKSVCGLKTMD 74
Query: 259 NEPLLVTSSPDNTLKLWIFDKADG 282
+ L++ D + LW D A+G
Sbjct: 75 GKERLLSQGRDQRICLW--DLAEG 96
Score = 90 (36.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 46/189 (24%), Positives = 72/189 (38%)
Query: 395 SKMDDMFLVPERCKQAKQSKPTCVYITH--CGN--FVLIGYSSGHVDRFNIQSGAHRGSY 450
SK L PE AK P C+ + CG+ +L GY G V +N+ +G
Sbjct: 143 SKTSVCTLKPE--VGAKLGMPMCLKLWQGSCGSQPSLLAGYEDGSVLLWNLSTGKVLSQL 200
Query: 451 GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF-KQTGKPPLRSIKLDN-GISFF 508
+P V + D+ ISG +++ + +W +Q ++ +L N GIS
Sbjct: 201 ICHQEP-----VMSLDFDSEKAKGISGSSEKVLSIWSLNEQQNLQVQKTHRLVNAGISDI 255
Query: 509 RTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFS----PDSRWLITASM 564
+ +LA D + I + L H + FS P R L +
Sbjct: 256 TIRPDKKILATAGWDHRIRIFGWKKLKPLAVLDYHTATVHSVSFSDHKSPSDRLLAAGAK 315
Query: 565 DCTIRVWDI 573
D I +W I
Sbjct: 316 DHRISIWSI 324
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 123 (48.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 33/135 (24%), Positives = 56/135 (41%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG--------KPPLRSIKLDNGISFF 508
GH V + D ++ S +D T+K+W KQ + +IK
Sbjct: 360 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPAT 419
Query: 509 RTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
+ MLA D TV + D++ I L+ H + FSPD ++L + S D +
Sbjct: 420 SNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCV 479
Query: 569 RVWDIPSSQLIDCFQ 583
+W+ S L+ ++
Sbjct: 480 HIWNTQSGSLVHSYR 494
Score = 66 (28.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 38/152 (25%), Positives = 55/152 (36%)
Query: 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV--ENQIKKAH---------- 247
FI W PV+ L + SGS +WNL + Q+ H
Sbjct: 186 FICAWNPVSDL---------LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 236
Query: 248 -RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
K VT + + LL T S D ++W DGN L G P + +
Sbjct: 237 SNKDVTSLDWNSDGTLLATGSYDGFARIWT---EDGN---LASTLGQHKGPIFALKWNKK 290
Query: 307 SDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
+ ILSA D T I++ + + + SA
Sbjct: 291 GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSA 322
Score = 59 (25.8 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 289 IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
+ GH + +I + SD + S +GDST RI+N +E SN
Sbjct: 177 VLRGHESEV-FICAWNPVSDLLASGSGDSTARIWNL-NENSN 216
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 123 (48.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 33/135 (24%), Positives = 56/135 (41%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG--------KPPLRSIKLDNGISFF 508
GH V + D ++ S +D T+K+W KQ + +IK
Sbjct: 360 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPAT 419
Query: 509 RTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
+ MLA D TV + D++ I L+ H + FSPD ++L + S D +
Sbjct: 420 SNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCV 479
Query: 569 RVWDIPSSQLIDCFQ 583
+W+ S L+ ++
Sbjct: 480 HIWNTQSGSLVHSYR 494
Score = 66 (28.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 38/152 (25%), Positives = 55/152 (36%)
Query: 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV--ENQIKKAH---------- 247
FI W PV+ L + SGS +WNL + Q+ H
Sbjct: 186 FICAWNPVSDL---------LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 236
Query: 248 -RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
K VT + + LL T S D ++W DGN L G P + +
Sbjct: 237 SNKDVTSLDWNSDGTLLATGSYDGFARIWT---EDGN---LASTLGQHKGPIFALKWNKK 290
Query: 307 SDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
+ ILSA D T I++ + + + SA
Sbjct: 291 GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSA 322
Score = 59 (25.8 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 289 IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
+ GH + +I + SD + S +GDST RI+N +E SN
Sbjct: 177 VLRGHESEV-FICAWNPVSDLLASGSGDSTARIWNL-NENSN 216
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 123 (48.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 33/135 (24%), Positives = 56/135 (41%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQ--------TGKPPLRSIKLDNGISFF 508
GH V + D ++ S +D T+K+W KQ + +IK
Sbjct: 361 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPAT 420
Query: 509 RTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
S MLA D TV + D++ + L+ H + FSPD ++L + S D +
Sbjct: 421 SNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCV 480
Query: 569 RVWDIPSSQLIDCFQ 583
+W+ S L+ ++
Sbjct: 481 HIWNTQSGSLVHSYR 495
Score = 66 (28.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 38/152 (25%), Positives = 55/152 (36%)
Query: 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV--ENQIKKAH---------- 247
FI W PV+ L + SGS +WNL + Q+ H
Sbjct: 187 FICAWNPVSDL---------LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 237
Query: 248 -RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
K VT + + LL T S D ++W DGN L G P + +
Sbjct: 238 SNKDVTSLDWNSDGTLLATGSYDGFARIWT---EDGN---LASTLGQHKGPIFALKWNKK 291
Query: 307 SDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
+ ILSA D T I++ + + + SA
Sbjct: 292 GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSA 323
Score = 59 (25.8 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 289 IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
+ GH + +I + SD + S +GDST RI+N +E SN
Sbjct: 178 VLRGHESEV-FICAWNPVSDLLASGSGDSTARIWNL-NENSN 217
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 70/289 (24%), Positives = 114/289 (39%)
Query: 53 KAFHVYGCNHFKLLSV--SPQHEDDITCLSSDFFHIYTSANN-IIYAWRRGIDIVGTYKG 109
K FH +HF SV SP E + C++S F I + I+ R I T+
Sbjct: 2 KRFH----SHFNGYSVEFSPFEEQRLACVTSQHFGIIGNGRQYILDVLDRDIGAFKTFDT 57
Query: 110 HTSPVHLILPFGP--HLISVDEESNVKVWDIKAEETYLEL-SFDNDTFKIMGKRWNSCVN 166
H+ S + ++K+WD +A + SF+ T ++ WN
Sbjct: 58 RDGLYDCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTK 117
Query: 167 VLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQ--------TWGPVTALSFRTDGPP 218
D G ++ I + N D SL F + W P A F +
Sbjct: 118 --------DTFITGSWDQSIKIWNPRMDRSLKTFREHRYCIYSAIWSPRNAHLFAS---- 165
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
VSG T L +W+ D + N IK +++T YN+ +VT S D T+++W
Sbjct: 166 --VSGDRT--LKIWDSRDNRSLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIR 221
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
D +LR GH+ I+ +S + S + D ++ +++ E
Sbjct: 222 YPDRPTTILR---GHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRARE 267
>POMBASE|SPBC3D6.12 [details] [associations]
symbol:dip2 "U3 snoRNA associated protein Dip2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0030515
"snoRNA binding" evidence=ISO] [GO:0032040 "small-subunit
processome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC3D6.12 GO:GO:0005829 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032040 GO:GO:0030490
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 PIR:T40372 RefSeq:NP_595524.1
ProteinModelPortal:P87177 STRING:P87177 EnsemblFungi:SPBC3D6.12.1
GeneID:2540971 KEGG:spo:SPBC3D6.12 NextBio:20802086 Uniprot:P87177
Length = 922
Score = 120 (47.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 29/121 (23%), Positives = 61/121 (50%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS 515
PGH VR + + +++SG N ++K+W+ K T +R+I+ ++ + +
Sbjct: 393 PGHRADVRTLALSANHDVILSGANG-SLKLWNKKTTSC--IRTIECGYVLAASFINNDKC 449
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+++ + + DI + ++I ++ H G + D D + TAS D T+++W + S
Sbjct: 450 IVSAYKSG-ELEVYDIASSSLIERIQAHDGAIWDLAVGHDGTYFATASADHTVKLWSLKS 508
Query: 576 S 576
S
Sbjct: 509 S 509
Score = 95 (38.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 36/161 (22%), Positives = 67/161 (41%)
Query: 427 VLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
++ Y SG ++ ++I S + + H G + + + + D TVK+W
Sbjct: 450 IVSAYKSGELEVYDIASSSLI-----ERIQAHDGAIWDLAVGHDGTYFATASADHTVKLW 504
Query: 487 HFKQT-----GKP-PLRSIKLDNG--ISF------FRTHQESSMLAVCLDDFTVNIIDID 532
K + G + ++KL+ I F + + +A L D TV + +D
Sbjct: 505 SLKSSFDFVPGTTRKVTTLKLEQTRQIDFTDDVLAVKISPDGRFVAASLLDNTVKVYYLD 564
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ L GH + D S DS+ L+T S D +++W +
Sbjct: 565 SLKFFLNLYGHKLPVLSMDISYDSKLLVTCSADKNVKIWGL 605
Score = 86 (35.3 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+S +L C D V I +D + + H + + F PD+ T S D +R WD
Sbjct: 587 DSKLLVTCSADKNVKIWGLDFGDCHKSIFAHQDSIMEVTFQPDTYNFFTCSKDREVRYWD 646
Query: 573 IPSSQLI 579
S LI
Sbjct: 647 GKSFDLI 653
Score = 83 (34.3 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 42/159 (26%), Positives = 76/159 (47%)
Query: 122 PHLISVDEESNVKVW--DIKAEET---YLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDI 176
P L++ + ++++V+ D+K+E + E + +I G R + V L S D+
Sbjct: 353 PTLVTSLQNNSIEVYALDVKSEGSAAPLTERASRISAIEIPGHRAD--VRTLALSANHDV 410
Query: 177 IGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED 236
I G +N + L N T S + I+ G V A SF + +VS +G L V+++
Sbjct: 411 ILSG-ANGSLKLWNKKTT-SCIRTIEC-GYVLAASF-INNDKCIVSAYKSGELEVYDIAS 466
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
+ +I+ AH + ++ T+S D+T+KLW
Sbjct: 467 SSLIERIQ-AHDGAIWDLAVGHDGTYFATASADHTVKLW 504
Score = 75 (31.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 24/81 (29%), Positives = 39/81 (48%)
Query: 76 ITCLSS-DFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPF---GPHLISVDEES 131
+TC+++ D + A+ I W+ G +++ T GH S V + F G L S ++
Sbjct: 69 VTCIANFDEMYAVGYADGSIRLWKDG-ELLITLNGHKSAV-TTMDFDKMGTRLASGSMDT 126
Query: 132 NVKVWDIKAEETYLELSFDND 152
++ VWDI AE L D
Sbjct: 127 DIIVWDIVAETGLFRLRGHKD 147
Score = 62 (26.9 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 261 PLLVTSSPDNTLKLWIFD-KADGNG-----RLLRIRE----GHSAPPNYIQFYGNSSDNI 310
P LVTS +N+++++ D K++G+ R RI GH A + N D I
Sbjct: 353 PTLVTSLQNNSIEVYALDVKSEGSAAPLTERASRISAIEIPGHRADVRTLALSANH-DVI 411
Query: 311 LSAAGDSTLRIFNTKS 326
LS A S L+++N K+
Sbjct: 412 LSGANGS-LKLWNKKT 426
Score = 58 (25.5 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 75 DITCLSSDFFHIYTSANNIIYAWRRGID-IVGTYKGHTSPVHL--ILPFGPHLISVDEES 131
D+ SSD F + ++ + W I V T+ H + + P ++ S
Sbjct: 178 DVDSKSSDSFLLSVGKDSFMKLWDLSIQHCVETHVDHQGEIWAMCVSPDAKRCLTAGTGS 237
Query: 132 NVKVWDI 138
+VKVW+I
Sbjct: 238 DVKVWEI 244
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 119 (46.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 35/137 (25%), Positives = 60/137 (43%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG----ISFFRTHQ 512
GH V + D ++ S +D T+K+W KQ + + ++ N I + T
Sbjct: 410 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQ--EVCIHDLQAHNKEIYTIKWSPTGP 467
Query: 513 ESS------MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDC 566
+S MLA D TV + DI+ L+ H + FSPD ++L + S D
Sbjct: 468 ATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDK 527
Query: 567 TIRVWDIPSSQLIDCFQ 583
+ +W+ S L+ ++
Sbjct: 528 CVHIWNTQSGNLVHSYR 544
Score = 71 (30.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 39/152 (25%), Positives = 55/152 (36%)
Query: 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV--ENQIKKAH---------- 247
FI W PV+ L + SGS +WNL + Q+ H
Sbjct: 236 FICAWNPVSDL---------LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 286
Query: 248 -RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
K VT + N LL T S D ++W DGN L G P + +
Sbjct: 287 SNKDVTSLDWNTNGTLLATGSYDGFARIWT---EDGN---LASTLGQHKGPIFALKWNRK 340
Query: 307 SDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
+ ILSA D T I++ + + + SA
Sbjct: 341 GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSA 372
Score = 59 (25.8 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 289 IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330
+ GH + +I + SD + S +GDST RI+N +E SN
Sbjct: 227 VLRGHESEV-FICAWNPVSDLLASGSGDSTARIWNL-NENSN 266
>UNIPROTKB|E1BBZ9 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:DAAA02048546 IPI:IPI00718427 RefSeq:XP_002695684.2
RefSeq:XP_885171.4 UniGene:Bt.20080 ProteinModelPortal:E1BBZ9
Ensembl:ENSBTAT00000006593 GeneID:614851 KEGG:bta:614851
Uniprot:E1BBZ9
Length = 421
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 34/101 (33%), Positives = 52/101 (51%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531
I++S D+T++VW K G ++ ++ N + +SSML V + ++
Sbjct: 185 ILVSASRDKTLRVWDLKDDGNM-MKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNM 243
Query: 532 DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
D T+IRKL GH + DFSPD L TAS D + +WD
Sbjct: 244 DKYTMIRKLEGHHHDVVACDFSPDGALLATASYDTRVYIWD 284
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 37/147 (25%), Positives = 64/147 (43%)
Query: 176 IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
++ GL+N +I + ++ T + L+ + V L+F DG ++VS S L VW+L+
Sbjct: 142 LLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLK 201
Query: 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA 295
D ++ + H+ V F + +L + + LW DK ++R EGH
Sbjct: 202 DDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYT----MIRKLEGHHH 257
Query: 296 PPNYIQFYGNSSDNILSAAGDSTLRIF 322
F S D L A R++
Sbjct: 258 DVVACDF---SPDGALLATASYDTRVY 281
>UNIPROTKB|E2RFV0 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:AAEX03006660 RefSeq:XP_853945.1 ProteinModelPortal:E2RFV0
Ensembl:ENSCAFT00000029577 GeneID:480619 KEGG:cfa:480619
NextBio:20855611 Uniprot:E2RFV0
Length = 421
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 34/101 (33%), Positives = 52/101 (51%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531
I++S D+T++VW K G ++ ++ N + +SSML V + ++
Sbjct: 185 ILVSASRDKTLRVWDLKDDGNM-MKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNM 243
Query: 532 DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
D T+IRKL GH + DFSPD L TAS D + +WD
Sbjct: 244 DKYTMIRKLEGHHHDVVACDFSPDGALLATASYDTRVYIWD 284
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 37/147 (25%), Positives = 64/147 (43%)
Query: 176 IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
++ GL+N +I + ++ T + L+ + V L+F DG ++VS S L VW+L+
Sbjct: 142 LLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLK 201
Query: 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA 295
D ++ + H+ V F + +L + + LW DK ++R EGH
Sbjct: 202 DDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYT----MIRKLEGHHH 257
Query: 296 PPNYIQFYGNSSDNILSAAGDSTLRIF 322
F S D L A R++
Sbjct: 258 DVVACDF---SPDGALLATASYDTRVY 281
>UNIPROTKB|Q9Y6I7 [details] [associations]
symbol:WSB1 "WD repeat and SOCS box-containing protein 1"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Reactome:REACT_6900
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ EMBL:AF072880 EMBL:AF069313 EMBL:AF240696
EMBL:AL110243 EMBL:AF112205 EMBL:AF106683 EMBL:AL110269
EMBL:BC021110 IPI:IPI00107502 IPI:IPI00146203 IPI:IPI00794974
PIR:T14773 PIR:T14788 RefSeq:NP_056441.6 RefSeq:NP_599027.1
UniGene:Hs.446017 ProteinModelPortal:Q9Y6I7 SMR:Q9Y6I7
IntAct:Q9Y6I7 STRING:Q9Y6I7 PhosphoSite:Q9Y6I7 DMDM:20532298
PaxDb:Q9Y6I7 PRIDE:Q9Y6I7 DNASU:26118 Ensembl:ENST00000262394
Ensembl:ENST00000348811 GeneID:26118 KEGG:hsa:26118 UCSC:uc002gzd.1
UCSC:uc002gze.1 GeneCards:GC17P025621 HGNC:HGNC:19221 HPA:HPA003293
MIM:610091 neXtProt:NX_Q9Y6I7 PharmGKB:PA134867554
InParanoid:Q9Y6I7 PhylomeDB:Q9Y6I7 ChiTaRS:WSB1 GenomeRNAi:26118
NextBio:48120 ArrayExpress:Q9Y6I7 Bgee:Q9Y6I7 CleanEx:HS_WSB1
Genevestigator:Q9Y6I7 GermOnline:ENSG00000109046 Uniprot:Q9Y6I7
Length = 421
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 34/101 (33%), Positives = 52/101 (51%)
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531
I++S D+T++VW K G ++ ++ N + +SSML V + ++
Sbjct: 185 ILVSASRDKTLRVWDLKDDGNM-MKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNM 243
Query: 532 DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
D T+IRKL GH + DFSPD L TAS D + +WD
Sbjct: 244 DKYTMIRKLEGHHHDVVACDFSPDGALLATASYDTRVYIWD 284
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 37/147 (25%), Positives = 64/147 (43%)
Query: 176 IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
++ GL+N +I + ++ T + L+ + V L+F DG ++VS S L VW+L+
Sbjct: 142 LLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLK 201
Query: 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA 295
D ++ + H+ V F + +L + + LW DK ++R EGH
Sbjct: 202 DDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYT----MIRKLEGHHH 257
Query: 296 PPNYIQFYGNSSDNILSAAGDSTLRIF 322
F S D L A R++
Sbjct: 258 DVVACDF---SPDGALLATASYDTRVY 281
>MGI|MGI:1926139 [details] [associations]
symbol:Wsb1 "WD repeat and SOCS box-containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:1926139
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ ChiTaRS:WSB1 EMBL:AF033186 IPI:IPI00119829
RefSeq:NP_062627.3 UniGene:Mm.307022 UniGene:Mm.474790
ProteinModelPortal:O54927 SMR:O54927 IntAct:O54927 STRING:O54927
PhosphoSite:O54927 PRIDE:O54927 Ensembl:ENSMUST00000017821
GeneID:78889 KEGG:mmu:78889 InParanoid:O54927 NextBio:349672
Bgee:O54927 CleanEx:MM_WSB1 Genevestigator:O54927
GermOnline:ENSMUSG00000017677 Uniprot:O54927
Length = 421
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 38/128 (29%), Positives = 63/128 (49%)
Query: 454 NQPGHVGGVRGVV-SDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL-DNGISFFRTH 511
N H+ VR + + + + +++S D+T++VW K G ++ ++ N +
Sbjct: 165 NLVDHIEMVRDLTFAPDGSLLLVSASRDKTLRVWDLKDDGNM-VKVLRAHQNWVYSCAFS 223
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ SML V + ++D T+IRKL GH + DFSPD L TAS D + VW
Sbjct: 224 PDCSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALLATASYDTRVYVW 283
Query: 572 DIPSSQLI 579
D + L+
Sbjct: 284 DPHNGDLL 291
Score = 117 (46.2 bits), Expect = 0.00093, P = 0.00093
Identities = 38/147 (25%), Positives = 65/147 (44%)
Query: 176 IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
++ GL+N +I + ++ T + L+ + V L+F DG ++VS S L VW+L+
Sbjct: 142 LLATGLNNGRIKIWDVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTLRVWDLK 201
Query: 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA 295
D ++ +AH+ V F + +L + + LW DK ++R EGH
Sbjct: 202 DDGNMVKVLRAHQNWVYSCAFSPDCSMLCSVGASKAVFLWNMDKYT----MIRKLEGHHH 257
Query: 296 PPNYIQFYGNSSDNILSAAGDSTLRIF 322
F S D L A R++
Sbjct: 258 DVVACDF---SPDGALLATASYDTRVY 281
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 129 (50.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 41/189 (21%), Positives = 77/189 (40%)
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
+ +W + + + + +P+R + + V I+ G F L G G + +++ +G
Sbjct: 40 IIMWKLTRDETN--YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT 97
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
+ GH V V N+ ++SG D+T+K+W+ K ++ +S
Sbjct: 98 TRRF-----VGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVS 152
Query: 507 FFRTHQESS--MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564
R SS ++ C D V + ++ C + GH G L SPD +
Sbjct: 153 CVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212
Query: 565 DCTIRVWDI 573
D +WD+
Sbjct: 213 DGQAMLWDL 221
Score = 89 (36.4 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 31/118 (26%), Positives = 55/118 (46%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
V+ + +DG +SGS G L +W+L + H K V F + +V+
Sbjct: 66 VSDVVISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSADNRQIVSG 123
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFN 323
S D T+KLW G + + H+ + ++F NSS+ I+ + G D ++++N
Sbjct: 124 SRDKTIKLW---NTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWN 178
Score = 83 (34.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 33/126 (26%), Positives = 56/126 (44%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDRQ---VENQIKKAHRKVVTGAHFLYNE 260
G VT ++ P M++S S + +W L D + + + H V+ +
Sbjct: 16 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG 75
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDST 318
++ S D TL+LW D G R GH+ + F S+DN I+S + D T
Sbjct: 76 QFALSGSWDGTLRLW--DLTTGT--TTRRFVGHTKDVLSVAF---SADNRQIVSGSRDKT 128
Query: 319 LRIFNT 324
++++NT
Sbjct: 129 IKLWNT 134
Score = 82 (33.9 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 29/111 (26%), Positives = 50/111 (45%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
N I++S G D+ VKVW+ K I ++ + S+ A D + D
Sbjct: 162 NPIIVSCGWDKMVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Query: 531 IDTCTIIRKLSGHMGQLTDA-DFSPDSRWLITASMDCTIRVWDIPSSQLID 580
++ + L G G +A FSP+ WL A+ +I++WD+ ++D
Sbjct: 221 LNEGKHLYTLDG--GDTINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVD 268
Score = 58 (25.5 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 30/130 (23%), Positives = 46/130 (35%)
Query: 454 NQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQE 513
N GH G + V + SGG D +W + GK LD G +
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE-GK---HLYTLDGGDTINALCFS 242
Query: 514 SSMLAVCLDDF-TVNIIDIDTCTIIRKL---------SGHMGQLTDADFSPDSRWLITAS 563
+ +C ++ I D++ I+ +L Q T +S D + L
Sbjct: 243 PNRYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGY 302
Query: 564 MDCTIRVWDI 573
D IRVW +
Sbjct: 303 TDNLIRVWQV 312
Score = 51 (23.0 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 105 GTYKGHTSPVHLIL--PFGPHLI-SVDEESNVKVWDIKAEET 143
GT KGH+ V I P P +I S + + +W + +ET
Sbjct: 9 GTLKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET 50
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 135 (52.6 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 49/193 (25%), Positives = 83/193 (43%)
Query: 404 PERCKQAKQSKPTCVYITHCGNFVLIGYS----------------SGHVDRFNIQSGAHR 447
P A QSKPT V + F L G++ S D+ GA+
Sbjct: 17 PTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 76
Query: 448 GSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF 507
G + GH G+ V + + +++S +D+T+K+W +GK L+++K + F
Sbjct: 77 GKF-EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS-SGKC-LKTLKGHSNYVF 133
Query: 508 FRTHQESSMLAVCLD-DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDC 566
S L V D +V I D+ T ++ L H ++ F+ D ++++S D
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 567 TIRVWDIPSSQLI 579
R+WD S Q +
Sbjct: 194 LCRIWDTASGQCL 206
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 49/207 (23%), Positives = 90/207 (43%)
Query: 124 LISVDEESNVKVWDIKAEETYLELS-FDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS 182
L+S ++ +K+WD+ + + L N F C N +P ++I G
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF---------CCNF---NPQSNLIVSGSF 149
Query: 183 NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242
++ + + ++ T + L PV+A+ F DG ++VS S G +W+ Q
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKT 208
Query: 243 IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI-- 300
+ V+ F N ++ ++ DNTLKLW + K G+ L+ GH I
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK----GKCLKTYTGHKNEKYCIFA 264
Query: 301 QFYGNSSDNILSAAGDSTLRIFNTKSE 327
F I+S + D+ + I+N +++
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTK 291
Score = 100 (40.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 24/114 (21%), Positives = 60/114 (52%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNII 529
+ +++SG D++V++W K TGK L+++ + +S +++ S++ D I
Sbjct: 141 SNLIVSGSFDESVRIWDVK-TGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198
Query: 530 DIDTCTIIRKL-SGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
D + ++ L ++ FSP+ ++++ A++D T+++WD + + +
Sbjct: 199 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 252
Score = 93 (37.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 29/133 (21%), Positives = 60/133 (45%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQES 514
P H V V + +++S D ++W +G+ I DN +SF +
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSFVKFSPNG 226
Query: 515 S-MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ--LTDADFS-PDSRWLITASMDCTIRV 570
+LA LD+ T+ + D ++ +GH + A+FS +W+++ S D + +
Sbjct: 227 KYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285
Query: 571 WDIPSSQLIDCFQ 583
W++ + +++ Q
Sbjct: 286 WNLQTKEIVQKLQ 298
Score = 84 (34.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLW-IFDKADGNGRLLRIREGHSAPPNYIQFYGN 305
H K V+ F N L +SS D +K+W +D G+ + GH + + + +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKLGISDVA-WSS 97
Query: 306 SSDNILSAAGDSTLRIFNTKSETSNKNL 333
S+ ++SA+ D TL+I++ S K L
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTL 125
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 135 (52.6 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 49/193 (25%), Positives = 83/193 (43%)
Query: 404 PERCKQAKQSKPTCVYITHCGNFVLIGYS----------------SGHVDRFNIQSGAHR 447
P A QSKPT V + F L G++ S D+ GA+
Sbjct: 17 PTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 76
Query: 448 GSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF 507
G + GH G+ V + + +++S +D+T+K+W +GK L+++K + F
Sbjct: 77 GKF-EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS-SGKC-LKTLKGHSNYVF 133
Query: 508 FRTHQESSMLAVCLD-DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDC 566
S L V D +V I D+ T ++ L H ++ F+ D ++++S D
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 567 TIRVWDIPSSQLI 579
R+WD S Q +
Sbjct: 194 LCRIWDTASGQCL 206
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 49/207 (23%), Positives = 90/207 (43%)
Query: 124 LISVDEESNVKVWDIKAEETYLELS-FDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS 182
L+S ++ +K+WD+ + + L N F C N +P ++I G
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF---------CCNF---NPQSNLIVSGSF 149
Query: 183 NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242
++ + + ++ T + L PV+A+ F DG ++VS S G +W+ Q
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKT 208
Query: 243 IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI-- 300
+ V+ F N ++ ++ DNTLKLW + K G+ L+ GH I
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK----GKCLKTYTGHKNEKYCIFA 264
Query: 301 QFYGNSSDNILSAAGDSTLRIFNTKSE 327
F I+S + D+ + I+N +++
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTK 291
Score = 100 (40.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 24/114 (21%), Positives = 60/114 (52%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNII 529
+ +++SG D++V++W K TGK L+++ + +S +++ S++ D I
Sbjct: 141 SNLIVSGSFDESVRIWDVK-TGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198
Query: 530 DIDTCTIIRKL-SGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
D + ++ L ++ FSP+ ++++ A++D T+++WD + + +
Sbjct: 199 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 252
Score = 93 (37.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 29/133 (21%), Positives = 60/133 (45%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQES 514
P H V V + +++S D ++W +G+ I DN +SF +
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSFVKFSPNG 226
Query: 515 S-MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ--LTDADFS-PDSRWLITASMDCTIRV 570
+LA LD+ T+ + D ++ +GH + A+FS +W+++ S D + +
Sbjct: 227 KYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285
Query: 571 WDIPSSQLIDCFQ 583
W++ + +++ Q
Sbjct: 286 WNLQTKEIVQKLQ 298
Score = 84 (34.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLW-IFDKADGNGRLLRIREGHSAPPNYIQFYGN 305
H K V+ F N L +SS D +K+W +D G+ + GH + + + +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKLGISDVA-WSS 97
Query: 306 SSDNILSAAGDSTLRIFNTKSETSNKNL 333
S+ ++SA+ D TL+I++ S K L
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTL 125
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 135 (52.6 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 49/193 (25%), Positives = 83/193 (43%)
Query: 404 PERCKQAKQSKPTCVYITHCGNFVLIGYS----------------SGHVDRFNIQSGAHR 447
P A QSKPT V + F L G++ S D+ GA+
Sbjct: 17 PTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 76
Query: 448 GSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF 507
G + GH G+ V + + +++S +D+T+K+W +GK L+++K + F
Sbjct: 77 GKF-EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS-SGKC-LKTLKGHSNYVF 133
Query: 508 FRTHQESSMLAVCLD-DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDC 566
S L V D +V I D+ T ++ L H ++ F+ D ++++S D
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 567 TIRVWDIPSSQLI 579
R+WD S Q +
Sbjct: 194 LCRIWDTASGQCL 206
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 49/207 (23%), Positives = 90/207 (43%)
Query: 124 LISVDEESNVKVWDIKAEETYLELS-FDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS 182
L+S ++ +K+WD+ + + L N F C N +P ++I G
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF---------CCNF---NPQSNLIVSGSF 149
Query: 183 NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242
++ + + ++ T + L PV+A+ F DG ++VS S G +W+ Q
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKT 208
Query: 243 IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI-- 300
+ V+ F N ++ ++ DNTLKLW + K G+ L+ GH I
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK----GKCLKTYTGHKNEKYCIFA 264
Query: 301 QFYGNSSDNILSAAGDSTLRIFNTKSE 327
F I+S + D+ + I+N +++
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTK 291
Score = 100 (40.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 24/114 (21%), Positives = 60/114 (52%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNII 529
+ +++SG D++V++W K TGK L+++ + +S +++ S++ D I
Sbjct: 141 SNLIVSGSFDESVRIWDVK-TGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198
Query: 530 DIDTCTIIRKL-SGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
D + ++ L ++ FSP+ ++++ A++D T+++WD + + +
Sbjct: 199 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 252
Score = 93 (37.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 29/133 (21%), Positives = 60/133 (45%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQES 514
P H V V + +++S D ++W +G+ I DN +SF +
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSFVKFSPNG 226
Query: 515 S-MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ--LTDADFS-PDSRWLITASMDCTIRV 570
+LA LD+ T+ + D ++ +GH + A+FS +W+++ S D + +
Sbjct: 227 KYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285
Query: 571 WDIPSSQLIDCFQ 583
W++ + +++ Q
Sbjct: 286 WNLQTKEIVQKLQ 298
Score = 84 (34.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLW-IFDKADGNGRLLRIREGHSAPPNYIQFYGN 305
H K V+ F N L +SS D +K+W +D G+ + GH + + + +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKLGISDVA-WSS 97
Query: 306 SSDNILSAAGDSTLRIFNTKSETSNKNL 333
S+ ++SA+ D TL+I++ S K L
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTL 125
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 135 (52.6 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 49/193 (25%), Positives = 83/193 (43%)
Query: 404 PERCKQAKQSKPTCVYITHCGNFVLIGYS----------------SGHVDRFNIQSGAHR 447
P A QSKPT V + F L G++ S D+ GA+
Sbjct: 17 PTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 76
Query: 448 GSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF 507
G + GH G+ V + + +++S +D+T+K+W +GK L+++K + F
Sbjct: 77 GKF-EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS-SGKC-LKTLKGHSNYVF 133
Query: 508 FRTHQESSMLAVCLD-DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDC 566
S L V D +V I D+ T ++ L H ++ F+ D ++++S D
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 567 TIRVWDIPSSQLI 579
R+WD S Q +
Sbjct: 194 LCRIWDTASGQCL 206
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 49/207 (23%), Positives = 90/207 (43%)
Query: 124 LISVDEESNVKVWDIKAEETYLELS-FDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS 182
L+S ++ +K+WD+ + + L N F C N +P ++I G
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF---------CCNF---NPQSNLIVSGSF 149
Query: 183 NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242
++ + + ++ T + L PV+A+ F DG ++VS S G +W+ Q
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKT 208
Query: 243 IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI-- 300
+ V+ F N ++ ++ DNTLKLW + K G+ L+ GH I
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK----GKCLKTYTGHKNEKYCIFA 264
Query: 301 QFYGNSSDNILSAAGDSTLRIFNTKSE 327
F I+S + D+ + I+N +++
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTK 291
Score = 100 (40.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 24/114 (21%), Positives = 60/114 (52%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNII 529
+ +++SG D++V++W K TGK L+++ + +S +++ S++ D I
Sbjct: 141 SNLIVSGSFDESVRIWDVK-TGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198
Query: 530 DIDTCTIIRKL-SGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
D + ++ L ++ FSP+ ++++ A++D T+++WD + + +
Sbjct: 199 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 252
Score = 93 (37.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 29/133 (21%), Positives = 60/133 (45%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQES 514
P H V V + +++S D ++W +G+ I DN +SF +
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSFVKFSPNG 226
Query: 515 S-MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ--LTDADFS-PDSRWLITASMDCTIRV 570
+LA LD+ T+ + D ++ +GH + A+FS +W+++ S D + +
Sbjct: 227 KYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285
Query: 571 WDIPSSQLIDCFQ 583
W++ + +++ Q
Sbjct: 286 WNLQTKEIVQKLQ 298
Score = 84 (34.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLW-IFDKADGNGRLLRIREGHSAPPNYIQFYGN 305
H K V+ F N L +SS D +K+W +D G+ + GH + + + +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKLGISDVA-WSS 97
Query: 306 SSDNILSAAGDSTLRIFNTKSETSNKNL 333
S+ ++SA+ D TL+I++ S K L
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTL 125
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 33/125 (26%), Positives = 60/125 (48%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK--PPLRSIKLDNGISFFRTHQES 514
GH V V + + S D+ +K+W GK + KL GIS +S
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDGKFEKTISGHKL--GISDVAWSSDS 99
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
++L DD T+ I D+ + ++ L GH + +F+P S +++ S D ++R+WD+
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 575 SSQLI 579
+ + +
Sbjct: 160 TGKCL 164
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/137 (26%), Positives = 66/137 (48%)
Query: 444 GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN 503
GA+ G + GH G+ V + + +++S +D+T+K+W +GK L+++K +
Sbjct: 73 GAYDGKF-EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS-SGKC-LKTLKGHS 129
Query: 504 GISFFRTHQESSMLAVCLD-DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITA 562
F S L V D +V I D+ T ++ L H ++ F+ D ++++
Sbjct: 130 NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 189
Query: 563 SMDCTIRVWDIPSSQLI 579
S D R+WD S Q +
Sbjct: 190 SYDGLCRIWDTASGQCL 206
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 48/207 (23%), Positives = 89/207 (42%)
Query: 124 LISVDEESNVKVWDIKAEETYLELS-FDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS 182
L+S ++ +K+WD+ + + L N F C N +P ++I G
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF---------CCNF---NPQSNLIVSGSF 149
Query: 183 NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242
++ + + ++ T + L PV+A+ F DG ++VS S G +W+ Q
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKT 208
Query: 243 IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI-- 300
+ V+ F N ++ ++ DNTLKLW + K G+ L+ H I
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK----GKCLKTYTCHKNEKYCIFA 264
Query: 301 QFYGNSSDNILSAAGDSTLRIFNTKSE 327
F I+S + D+ + I+N +++
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTK 291
Score = 100 (40.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 24/114 (21%), Positives = 60/114 (52%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNII 529
+ +++SG D++V++W K TGK L+++ + +S +++ S++ D I
Sbjct: 141 SNLIVSGSFDESVRIWDVK-TGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198
Query: 530 DIDTCTIIRKL-SGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
D + ++ L ++ FSP+ ++++ A++D T+++WD + + +
Sbjct: 199 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 252
Score = 84 (34.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLW-IFDKADGNGRLLRIREGHSAPPNYIQFYGN 305
H K V+ F N L +SS D +K+W +D G+ + GH + + + +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKLGISDVA-WSS 97
Query: 306 SSDNILSAAGDSTLRIFNTKSETSNKNL 333
S+ ++SA+ D TL+I++ S K L
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Score = 83 (34.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 28/133 (21%), Positives = 59/133 (44%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQES 514
P H V V + +++S D ++W +G+ I DN +SF +
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSFVKFSPNG 226
Query: 515 S-MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ--LTDADFS-PDSRWLITASMDCTIRV 570
+LA LD+ T+ + D ++ + H + A+FS +W+++ S D + +
Sbjct: 227 KYILAATLDN-TLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285
Query: 571 WDIPSSQLIDCFQ 583
W++ + +++ Q
Sbjct: 286 WNLQTKEVVQKLQ 298
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 33/125 (26%), Positives = 60/125 (48%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK--PPLRSIKLDNGISFFRTHQES 514
GH V V + + S D+ +K+W GK + KL GIS +S
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDGKFEKTISGHKL--GISDVAWSSDS 99
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
++L DD T+ I D+ + ++ L GH + +F+P S +++ S D ++R+WD+
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 575 SSQLI 579
+ + +
Sbjct: 160 TGKCL 164
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 49/207 (23%), Positives = 90/207 (43%)
Query: 124 LISVDEESNVKVWDIKAEETYLELS-FDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS 182
L+S ++ +K+WD+ + + L N F C N +P ++I G
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF---------CCNF---NPQSNLIVSGSF 149
Query: 183 NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242
++ + + ++ T + L PV+A+ F DG ++VS S G +W+ Q
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKT 208
Query: 243 IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI-- 300
+ V+ F N ++ ++ DNTLKLW + K G+ L+ GH I
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK----GKCLKTYTGHKNEKYCIFA 264
Query: 301 QFYGNSSDNILSAAGDSTLRIFNTKSE 327
F I+S + D+ + I+N +++
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTK 291
Score = 100 (40.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 24/114 (21%), Positives = 60/114 (52%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNII 529
+ +++SG D++V++W K TGK L+++ + +S +++ S++ D I
Sbjct: 141 SNLIVSGSFDESVRIWDVK-TGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198
Query: 530 DIDTCTIIRKL-SGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
D + ++ L ++ FSP+ ++++ A++D T+++WD + + +
Sbjct: 199 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 252
Score = 93 (37.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 29/133 (21%), Positives = 60/133 (45%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG-ISFFRTHQES 514
P H V V + +++S D ++W +G+ I DN +SF +
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSFVKFSPNG 226
Query: 515 S-MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ--LTDADFS-PDSRWLITASMDCTIRV 570
+LA LD+ T+ + D ++ +GH + A+FS +W+++ S D + +
Sbjct: 227 KYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285
Query: 571 WDIPSSQLIDCFQ 583
W++ + +++ Q
Sbjct: 286 WNLQTKEIVQKLQ 298
Score = 84 (34.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLW-IFDKADGNGRLLRIREGHSAPPNYIQFYGN 305
H K V+ F N L +SS D +K+W +D G+ + GH + + + +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKLGISDVA-WSS 97
Query: 306 SSDNILSAAGDSTLRIFNTKSETSNKNL 333
S+ ++SA+ D TL+I++ S K L
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTL 125
WARNING: HSPs involving 309 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 583 559 0.00099 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 559
No. of states in DFA: 623 (66 KB)
Total size of DFA: 357 KB (2177 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.82u 0.14s 46.96t Elapsed: 00:00:02
Total cpu time: 46.91u 0.14s 47.05t Elapsed: 00:00:02
Start: Thu Aug 15 16:04:06 2013 End: Thu Aug 15 16:04:08 2013
WARNINGS ISSUED: 2