RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14906
(583 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 95.2 bits (235), Expect = 4e-22
Identities = 59/336 (17%), Positives = 110/336 (32%), Gaps = 24/336 (7%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E HR VT F ++V++S D T+K+W ++ G R +GH+
Sbjct: 6 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE----TGDFERTLKGHTDS 61
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKF 356
I F + S + + +
Sbjct: 62 VQDISFD----------------HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 105
Query: 357 ILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT 416
+ + ++ +D V ++ ++ + + + A S
Sbjct: 106 SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 165
Query: 417 CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476
V + H S A SY + G S ++S
Sbjct: 166 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSIS---EATGSETKKSGKPGPFLLS 222
Query: 477 GGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI 536
G D+T+K+W TG + + DN + H + C DD T+ + D
Sbjct: 223 GSRDKTIKMWDVS-TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 281
Query: 537 IRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ L+ H +T DF + +++T S+D T++VW+
Sbjct: 282 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 69.4 bits (168), Expect = 2e-13
Identities = 42/232 (18%), Positives = 77/232 (33%), Gaps = 13/232 (5%)
Query: 55 FHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPV 114
+ + D + I + V T+ GH V
Sbjct: 87 DFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 146
Query: 115 HL--ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS--------- 163
+ G + S + V+VW + +E EL + + S
Sbjct: 147 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEAT 206
Query: 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG 223
+ + G +K I + ++ T LM + V + F + G ++S
Sbjct: 207 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK-FILSC 265
Query: 224 SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
++ L VW+ ++++ + AH VT F P +VT S D T+K+W
Sbjct: 266 ADDKTLRVWDYKNKRCMKTLN-AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316
Score = 67.5 bits (163), Expect = 8e-13
Identities = 47/311 (15%), Positives = 98/311 (31%), Gaps = 25/311 (8%)
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKN 332
K WI GH +P + F+ S ++SA+ D+T+++++ ++ +
Sbjct: 1 KEWIPR-----PPEKYALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERT 54
Query: 333 LGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSF 392
L + + ++ + + + + + F + ++ S
Sbjct: 55 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF-------QGFECIRTMHGHDHNVSSV 107
Query: 393 YKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGH 452
D + R K K T G+ Q G S +
Sbjct: 108 SIMPNGDHIVSASRDKTIKM----WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 163
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ 512
D VR V + V+ + SI G ++ +
Sbjct: 164 D------QTVRVWVVATKECKAELREHRHVVECISWAPESSYS--SISEATGSETKKSGK 215
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
L D T+ + D+ T + L GH + F +++++ + D T+RVWD
Sbjct: 216 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 275
Query: 573 IPSSQLIDCFQ 583
+ + +
Sbjct: 276 YKNKRCMKTLN 286
Score = 52.1 bits (123), Expect = 7e-08
Identities = 55/283 (19%), Positives = 91/283 (32%), Gaps = 60/283 (21%)
Query: 97 WRRGIDIVGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELS------ 148
W GH SPV ++ P ++S E++ +KVWD + + L
Sbjct: 3 WIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSV 62
Query: 149 -------------------------FDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN 183
F + V+ + P D I +
Sbjct: 63 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD 122
Query: 184 KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI 243
K I + + T + F V + DG ++ S SN + VW + ++ + ++
Sbjct: 123 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAEL 181
Query: 244 KKAHRKVVTGAHFLYNEPLLVTS--------------------SPDNTLKLWIFDKADGN 283
+ HR VV + S S D T+K+W
Sbjct: 182 -REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS----T 236
Query: 284 GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
G L GH + F+ ILS A D TLR+++ K+
Sbjct: 237 GMCLMTLVGHDNWVRGVLFHSG-GKFILSCADDKTLRVWDYKN 278
Score = 41.3 bits (95), Expect = 2e-04
Identities = 16/133 (12%), Positives = 41/133 (30%), Gaps = 6/133 (4%)
Query: 11 TSSNSSKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSP 70
+ + +S + + L K ++ + L
Sbjct: 185 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 244
Query: 71 QHEDDITCL--SSDFFHIYT-SANNIIYAWR-RGIDIVGTYKGHTSPVHLI--LPFGPHL 124
H++ + + S I + + + + W + + T H V + P++
Sbjct: 245 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 304
Query: 125 ISVDEESNVKVWD 137
++ + VKVW+
Sbjct: 305 VTGSVDQTVKVWE 317
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 89.0 bits (219), Expect = 7e-20
Identities = 38/301 (12%), Positives = 93/301 (30%), Gaps = 19/301 (6%)
Query: 285 RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL-----GIASAN 339
R R GH A + + G S ++SA+ D L I+++ + + + +
Sbjct: 46 RTRRTLRGHLAKIYAMHW-GTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCA 104
Query: 340 RNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399
++ + + + ++ + + S D
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT 164
Query: 400 MFLVPERCKQAKQSKP-------TCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGH 452
+ + + + + + + G ++++ G R ++
Sbjct: 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF-- 222
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKV-WHFKQTGKPPLRSIKLDNGISFFRTH 511
GH + + +G +D T ++ + GI+
Sbjct: 223 ---TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS 279
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ +L DDF N+ D L+GH +++ + D + T S D +++W
Sbjct: 280 KSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Query: 572 D 572
+
Sbjct: 340 N 340
Score = 60.5 bits (145), Expect = 2e-10
Identities = 34/281 (12%), Positives = 76/281 (27%), Gaps = 9/281 (3%)
Query: 44 ETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDI 103
L ++ + P + + I
Sbjct: 68 RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC--AYAPSGNYVACGGLDNICSIYN 125
Query: 104 VGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS 163
+ T +G+ + +L + ++ + T +
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTG 185
Query: 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG 223
V L +P + G + L ++ F + A+ F +G +G
Sbjct: 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN-AFATG 244
Query: 224 SNTGHLTVWNLEDRQVENQIKKAHRKV-VTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG 282
S+ +++L Q + +T F + LL+ D +W K
Sbjct: 245 SDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK--- 301
Query: 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
+ GH + + + + + + DS L+I+N
Sbjct: 302 -ADRAGVLAGHDNRVSCLGV-TDDGMAVATGSWDSFLKIWN 340
Score = 52.8 bits (125), Expect = 5e-08
Identities = 15/99 (15%), Positives = 34/99 (34%)
Query: 485 VWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
+TG+ + ++ + D + + D+ + +GH
Sbjct: 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 545 GQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
+ F P+ T S D T R++D+ + Q + +
Sbjct: 227 SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265
Score = 44.0 bits (102), Expect = 3e-05
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 509 RTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
+ ++++ + + V I + T R L GH+ ++ + DSR L++AS D +
Sbjct: 23 KACADATLSQITNNIDPVGRIQMRT---RRTLRGHLAKIYAMHWGTDSRLLVSASQDGKL 79
Query: 569 RVWDIPSSQLIDCFQ 583
+WD ++ +
Sbjct: 80 IIWDSYTTNKVHAIP 94
Score = 34.3 bits (77), Expect = 0.032
Identities = 25/170 (14%), Positives = 55/170 (32%), Gaps = 7/170 (4%)
Query: 416 TCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVI 475
++ ++ G + ++ + + P V V
Sbjct: 59 YAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI-----PLRSSWVMTCAYAPSGNYVA 113
Query: 476 SGGNDQTVKVWHFK--QTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
GG D +++ K + R + G + + + D T + DI+T
Sbjct: 114 CGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET 173
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
+GH G + +PD+R ++ + D + ++WD+ F
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 223
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 87.9 bits (216), Expect = 3e-19
Identities = 66/395 (16%), Positives = 109/395 (27%), Gaps = 45/395 (11%)
Query: 202 QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE---DRQVENQIKKAHRKVVTGAHFLY 258
P L + P + + ++N + VE H VV F
Sbjct: 13 SKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSN 72
Query: 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN-ILSAAGDS 317
+ L T + T +++ RL + P N SSD I S
Sbjct: 73 DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP 131
Query: 318 TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNI 377
+ A+ + L R +E IL Q + L +
Sbjct: 132 DGKFL-------------ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDK- 177
Query: 378 AAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVD 437
D + T G ++ G V
Sbjct: 178 -------LVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVR 230
Query: 438 RFNIQSGAHRGSYGHDNQP--GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP- 494
++ ++G +N+ GH V VV Q V+SG D++VK+W+ +
Sbjct: 231 VWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKS 290
Query: 495 ----------PLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
+ I + + T Q + D V D + + L GH
Sbjct: 291 DSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHR 350
Query: 545 GQLT------DADFSPDSRWLITASMDCTIRVWDI 573
+ + P+ T S DC R+W
Sbjct: 351 NSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 44.8 bits (104), Expect = 2e-05
Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 1/95 (1%)
Query: 397 MDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQ 455
E + V T ++L G V ++ +SG GH N
Sbjct: 293 KTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNS 352
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQ 490
V G + +G D ++W +K+
Sbjct: 353 VISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387
Score = 34.4 bits (77), Expect = 0.031
Identities = 12/97 (12%), Positives = 32/97 (32%), Gaps = 12/97 (12%)
Query: 55 FHVYGCNHFKLLSVSPQHEDDITCL--SSDFFHIYT-SANNIIYAW-RRGIDIVGTYKGH 110
N H+D + + + + +I + S + + W ++ + + +GH
Sbjct: 290 SDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGH 349
Query: 111 TSPVHLIL--------PFGPHLISVDEESNVKVWDIK 139
+ V + P + + ++W K
Sbjct: 350 RNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 73.7 bits (179), Expect = 7e-15
Identities = 53/353 (15%), Positives = 102/353 (28%), Gaps = 22/353 (6%)
Query: 232 WNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE 291
W + + +K V+T F +V+ S DNTLK+W G+ LR
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAV----TGKCLRTLV 54
Query: 292 GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEK 351
GH+ Q N + + + + + +++
Sbjct: 55 GHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGS 114
Query: 352 MNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAK 411
+ + + + + +V ++ +
Sbjct: 115 RDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ 174
Query: 412 QSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN 471
+ G V+ G + +++++G + GH G+ +
Sbjct: 175 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL-----TGHQSLTSGMELKD-- 227
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531
I++SG D TVK+W K + + + + DD TV + D+
Sbjct: 228 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 287
Query: 532 DTCTIIRKL-----SGHMGQLTDADFSPDSRWLITASMDCT----IRVWDIPS 575
T IR L G G + S S + T + V D
Sbjct: 288 KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340
Score = 57.9 bits (138), Expect = 1e-09
Identities = 63/398 (15%), Positives = 126/398 (31%), Gaps = 66/398 (16%)
Query: 97 WRRG-IDIVGTYKGHTSPVHLILPF-GPHLISVDEESNVKVWDIKAEETYLELSFDNDTF 154
WRRG + KGH V L F G ++S +++ +KVW + L
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG- 59
Query: 155 KIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRT 214
V + + +S + E+ +G + +
Sbjct: 60 ----------VWSSQMRD-----NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH 104
Query: 215 DGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKL 274
+VSGS L VW++E Q + + V Y+ +V+ + D +K+
Sbjct: 105 LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR---CVQYDGRRVVSGAYDFMVKV 161
Query: 275 WIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLG 334
W + L +GH+ +QF G +++S + D+++R+++ ++
Sbjct: 162 WDPE----TETCLHTLQGHTNRVYSLQFDGI---HVVSGSLDTSIRVWDVETGN------ 208
Query: 335 IASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYK 394
S +NI + V +W
Sbjct: 209 ---------------CIHTLTGHQSLTSGMEL-------KDNILVSGNADSTVKIWDIKT 246
Query: 395 SKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDN 454
+ + + + + NFV+ G V +++++G +
Sbjct: 247 GQCLQT------LQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE 300
Query: 455 QPGHVGGVRGVVSDNLNQIVISGGNDQT----VKVWHF 488
G G V + + N + G + T + V F
Sbjct: 301 SGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338
Score = 56.4 bits (134), Expect = 3e-09
Identities = 48/304 (15%), Positives = 96/304 (31%), Gaps = 12/304 (3%)
Query: 282 GNGRLLRIREGHSAPPNY-IQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANR 340
G + ++ +GH +QF GN I+S + D+TL++++ + + L +
Sbjct: 4 GELKSPKVLKGHDDHVITCLQFCGNR---IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV 60
Query: 341 NNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDM 400
+ + ++ + V G + + + + D
Sbjct: 61 WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDAT 118
Query: 401 FLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVG 460
V + F ++ GH
Sbjct: 119 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 178
Query: 461 GVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVC 520
V + D V+SG D +++VW + + S ++L
Sbjct: 179 RVYSLQFDG--IHVVSGSLDTSIRVWDVETG-NCIHTLTGHQSLTSGMELK--DNILVSG 233
Query: 521 LDDFTVNIIDIDTCTIIRKLSGHMG-QLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
D TV I DI T ++ L G Q + ++IT+S D T+++WD+ + + I
Sbjct: 234 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFI 293
Query: 580 DCFQ 583
Sbjct: 294 RNLV 297
Score = 47.1 bits (110), Expect = 4e-06
Identities = 8/54 (14%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Query: 530 DIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
+ L GH + +++ S D T++VW + + +
Sbjct: 2 RRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV 54
Score = 44.4 bits (103), Expect = 2e-05
Identities = 42/292 (14%), Positives = 97/292 (33%), Gaps = 36/292 (12%)
Query: 56 HVYGCNHFKLLSVSPQHEDDITCL--SSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSP 113
V+ K L H + + ++ + + + T GHTS
Sbjct: 40 KVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTST 99
Query: 114 VHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDND-------------------TF 154
V + ++S ++ ++VWDI+ + L
Sbjct: 100 VRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMV 159
Query: 155 KIMGKRWNSCVNVLEPSPVV--------DIIGVGLSNKKIILHNILTDESLMEFIQTWGP 206
K+ +C++ L+ + G + I + ++ T +
Sbjct: 160 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL 219
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+ + + ++VSG+ + +W+++ Q ++ ++ +N+ ++TS
Sbjct: 220 TSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS 276
Query: 267 SPDNTLKLWIFDKADGNGRLLRIR-EGHSAPPNYIQFYGNSSDNILSAAGDS 317
S D T+KLW + L+ + G I+ S+ ++ A G
Sbjct: 277 SDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRA---SNTKLVCAVGSR 325
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 73.7 bits (179), Expect = 8e-15
Identities = 42/351 (11%), Positives = 99/351 (28%), Gaps = 43/351 (12%)
Query: 242 QIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQ 301
QI++A + ++ + ++ LL+ +S D +L ++ FD N LL+ + P
Sbjct: 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQ-SLRYKHPLLCCN 63
Query: 302 FYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPV 361
F N+ I + + S +
Sbjct: 64 FIDNTDLQIYVGTVQGEILKVDLIGSPSFQA--------------------------LTN 97
Query: 362 SQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYIT 421
++ + G+ R + + I + + ++ D + V + K +
Sbjct: 98 NEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMD 157
Query: 422 HCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ 481
+ +++G ++ V F + + + + D
Sbjct: 158 TNSSRLIVGMNNSQVQWFRLPLCEDDNGT-IEESGLKYQIRDVALLPKEQEGYACSSIDG 216
Query: 482 TVKVWHFKQTGKP----------PLRSIKLDNGISFFRT----HQESSMLAVCLDDFTVN 527
V V F G R D +++ L D ++
Sbjct: 217 RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIIS 276
Query: 528 IIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
++ T I+ + + + + L A+ D T + +
Sbjct: 277 CWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNAAIDQTI 326
Score = 48.3 bits (113), Expect = 1e-06
Identities = 7/42 (16%), Positives = 15/42 (35%)
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577
I++ ++D P L+ S D ++ V+
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA 44
Score = 36.0 bits (81), Expect = 0.010
Identities = 10/85 (11%), Positives = 22/85 (25%), Gaps = 3/85 (3%)
Query: 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKL---SGHMGQLTDADFSPDSRW 558
+ IS + S+L + D ++ + D L + L +F ++
Sbjct: 11 KDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDL 70
Query: 559 LITASMDCTIRVWDIPSSQLIDCFQ 583
I +
Sbjct: 71 QIYVGTVQGEILKVDLIGSPSFQAL 95
Score = 31.0 bits (68), Expect = 0.41
Identities = 26/289 (8%), Positives = 72/289 (24%), Gaps = 20/289 (6%)
Query: 64 KLLSVSPQHEDDITCL--SSDFFHIYT-SANNIIYAW----RRGIDIVGTYKGHTSPVHL 116
+++ + +D I+ + + S + + + + + + P+
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 117 ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDI 176
+ + + + +G +
Sbjct: 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD 121
Query: 177 IGVGL-SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
+ + + I + + + + + ++ S + E
Sbjct: 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCE 181
Query: 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG-----------NG 284
D + ++ A + SS D + + FD
Sbjct: 182 DDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241
Query: 285 RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
RL + P N I+F + +A D + +N ++ KN
Sbjct: 242 RLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDGIISCWNLQTRKKIKNF 289
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 72.6 bits (176), Expect = 2e-14
Identities = 41/379 (10%), Positives = 93/379 (24%), Gaps = 32/379 (8%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK-KAHRKVVTGAHFLYNEPLLV 264
P++ ++ D + N + ++ + + K H VTG + + +V
Sbjct: 9 PISCHAWNKDRT-QIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV 67
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
T D +W L+ +R +A
Sbjct: 68 TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPN----------------EKKFA 111
Query: 325 KSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGK 384
S N+ ++K +L + L + I +
Sbjct: 112 VGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 171
Query: 385 NKVSLWSFYKSKMDDMFLVPERCKQAKQ--SKPTCVYITHCGNFVLIGYSSGHVDRFNIQ 442
K + E ++ V + G+ V V +
Sbjct: 172 IKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD 231
Query: 443 SGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD 502
+ + P V+ +++ G+D ++ + + L
Sbjct: 232 KKMAVATLASETLPLLA------VTFITESSLVAAGHDCFPVLFTYD-SAAGKLSFGGRL 284
Query: 503 NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW---- 558
+ ++ D + S H ++ +
Sbjct: 285 DVPKQSSQRGLTARERFQNLDKKASSEGSAAAGA-GLDSLHKNSVSQISVLSGGKAKCSQ 343
Query: 559 LITASMDCTIRVWDIPSSQ 577
T MD + +WD+ S +
Sbjct: 344 FCTTGMDGGMSIWDVRSLE 362
Score = 44.5 bits (103), Expect = 3e-05
Identities = 26/173 (15%), Positives = 48/173 (27%), Gaps = 8/173 (4%)
Query: 416 TCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVI 475
+C + I ++ V + + H G V GV + ++
Sbjct: 11 SCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVH---ELKEHNGQVTGVDWAPDSNRIV 67
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNII-----D 530
+ G D+ VW K P I N + + V I +
Sbjct: 68 TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 127
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
D + D+ P+S L S D R++ ++ +
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPA 180
Score = 36.4 bits (82), Expect = 0.008
Identities = 46/388 (11%), Positives = 92/388 (23%), Gaps = 39/388 (10%)
Query: 119 PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIG 178
+ V +++ + ++ G W N + +
Sbjct: 17 KDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRI--------VT 68
Query: 179 VGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL---E 235
G + I GS + +++
Sbjct: 69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 128
Query: 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA 295
D V IKK R V + N LL S D +++ + R G
Sbjct: 129 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKM 188
Query: 296 PPNYIQFYGNSSDN-ILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNE 354
P + F +SS + + S S L A + +
Sbjct: 189 PFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLA 248
Query: 355 KFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSK 414
+ + + +AA H + + K+ + S+
Sbjct: 249 VTFIT-------------ESSLVAAGHDCFPVLFTYDSAAGKLS---FGGRLDVPKQSSQ 292
Query: 415 PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN-QI 473
N S G H+ S V + +
Sbjct: 293 RGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNS---------VSQISVLSGGKAKCSQ 343
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKL 501
+ G D + +W + + + L+ +K+
Sbjct: 344 FCTTGMDGGMSIWDVR-SLESALKDLKI 370
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 65.6 bits (158), Expect = 3e-12
Identities = 38/380 (10%), Positives = 79/380 (20%), Gaps = 53/380 (13%)
Query: 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN 259
F G A SF M + R H +VV
Sbjct: 3 FQGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNP 62
Query: 260 EPLLVTSSPDNTLKLW-IFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDST 318
+ T +K+W I + + + L G+++
Sbjct: 63 TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKL--LPDGCTLIVGGEAS 119
Query: 319 LRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIA 378
+ + + +++ F + +
Sbjct: 120 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 179
Query: 379 AIHTGKNKVSLWSFYKSKM-----DDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433
HT S +K+ D+ + + + + + G
Sbjct: 180 QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWL 239
Query: 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK 493
+ H H V + + +S G D + W
Sbjct: 240 AVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW------- 292
Query: 494 PPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFS 553
I + + D S
Sbjct: 293 ------------------------------------RTPYGASIFQS-KESSSVLSCDIS 315
Query: 554 PDSRWLITASMDCTIRVWDI 573
D ++++T S D V+++
Sbjct: 316 VDDKYIVTGSGDKKATVYEV 335
Score = 42.5 bits (98), Expect = 9e-05
Identities = 15/78 (19%), Positives = 22/78 (28%), Gaps = 3/78 (3%)
Query: 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL 257
+ V +L F G VS L W Q K V
Sbjct: 259 YQLHLHESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPYGASIFQSK--ESSSVLSCDIS 315
Query: 258 YNEPLLVTSSPDNTLKLW 275
++ +VT S D ++
Sbjct: 316 VDDKYIVTGSGDKKATVY 333
Score = 32.9 bits (73), Expect = 0.10
Identities = 12/118 (10%), Positives = 30/118 (25%), Gaps = 7/118 (5%)
Query: 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530
Q+ + + + + ++ + + + V + D
Sbjct: 21 GQMQPVPFPPDALIGPGIPRHARQ-INTLNHGEVVCAVTISNPTRHVYTGGKG-CVKVWD 78
Query: 531 IDTCTIIRKLS-----GHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
I +S + PD LI T+ +WD+ + +
Sbjct: 79 ISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAE 136
Score = 30.5 bits (67), Expect = 0.58
Identities = 9/104 (8%), Positives = 28/104 (26%), Gaps = 3/104 (2%)
Query: 38 FIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYT-SANNIIYA 96
+ + ++ K + + + +N++ A
Sbjct: 232 YCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNA 291
Query: 97 WRRGIDIVGTYKGHTSPVH--LILPFGPHLISVDEESNVKVWDI 138
WR +S V I ++++ + V+++
Sbjct: 292 WRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 65.0 bits (156), Expect = 3e-12
Identities = 32/300 (10%), Positives = 85/300 (28%), Gaps = 22/300 (7%)
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341
G+ +L+ GH+ + + ++S + D + +++ S + + I S + +
Sbjct: 1 GHDEVLKTISGHNKGITALTV-----NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNS 55
Query: 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401
+ + + + + +A + G V +
Sbjct: 56 KAQEYSSISWDDTLKVNGITKHEFG-----SQPKVASANNDGFTAVLTNDDDLLILQSFT 110
Query: 402 LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG 461
++ + ++ N+V +G G+ + S
Sbjct: 111 ---GDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSY 167
Query: 462 VRGVVSDNLNQIVISGGNDQTVKVWHFKQ-------TGKPPLRSIKLDNGISFFRTHQES 514
+ S+ G + + E
Sbjct: 168 ISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEE 227
Query: 515 SMLAVCLDDFTVNIIDIDT-CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
++A D + I + II+ L+ H + + + S L+++ D I+ W++
Sbjct: 228 DLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 286
Score = 43.4 bits (100), Expect = 4e-05
Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
Query: 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL 257
+ I + ++ +GS ++ +++++ + AH+ V +
Sbjct: 208 INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWE 267
Query: 258 YNEPLLVTSSPDNTLKLW 275
LV+S D +K W
Sbjct: 268 -TPSTLVSSGADACIKRW 284
Score = 41.1 bits (94), Expect = 2e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Query: 537 IRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577
++ +SGH +T +P LI+ S D I W S
Sbjct: 6 LKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH 42
Score = 33.4 bits (74), Expect = 0.066
Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 3/87 (3%)
Query: 55 FHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAW--RRGIDIVGTYKGHTS 112
+ + +S P + + S + I+ + +R + I+ H
Sbjct: 200 RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKD 259
Query: 113 PVH-LILPFGPHLISVDEESNVKVWDI 138
V+ L+ L+S ++ +K W++
Sbjct: 260 GVNNLLWETPSTLVSSGADACIKRWNV 286
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 64.8 bits (156), Expect = 7e-12
Identities = 19/319 (5%), Positives = 68/319 (21%), Gaps = 8/319 (2%)
Query: 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRI 321
++ + + L + D + P + +L
Sbjct: 3 YILAPARPDKLVVI--DTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 322 FNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIH 381
+ + + + +++ + K + S L + A++
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
Query: 382 -TGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFN 440
++ + + K + V G L+
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGT--LVEDKPIQSWEAE 178
Query: 441 IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK 500
+ + + ++ V + + +
Sbjct: 179 TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI 238
Query: 501 LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLI 560
+D + + + D++ I+++ + S D +
Sbjct: 239 MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVW 295
Query: 561 TASMDCTIRVWDIPSSQLI 579
+ +D + +
Sbjct: 296 LGGALGDLAAYDAETLEKK 314
Score = 47.9 bits (112), Expect = 2e-06
Identities = 27/347 (7%), Positives = 85/347 (24%), Gaps = 25/347 (7%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
+++ + L V + E V+ I P++ +P +
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVIT---------IADAGPTPMVPMVAPGGR-IAYATVN 53
Query: 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAN 339
+ + + G + + ++ AA + L
Sbjct: 54 KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113
Query: 340 RNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399
+ + + + + LA +D + + + + + + +
Sbjct: 114 PTRVALYD--AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKP 171
Query: 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHV 459
+ G Y++ + G D + G +
Sbjct: 172 IQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231
Query: 460 GGVR-------GVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ 512
+ + G ++ + ++ ++ + L +
Sbjct: 232 AMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNA--SIKRVPLPHSYYSVNVST 289
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKL----SGHMGQLTDADFSPD 555
+ S + + + D +T ++ + M + F+ D
Sbjct: 290 DGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFTRD 336
Score = 40.9 bits (94), Expect = 3e-04
Identities = 23/301 (7%), Positives = 60/301 (19%), Gaps = 17/301 (5%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
G + + + L +L + R ++
Sbjct: 36 PMVPMVAPGGRIAYATVNKSESLVKIDLVTGETL------GRIDLSTPEERVKSLFGAAL 89
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
SPD ++ A + + +K
Sbjct: 90 SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKL 149
Query: 327 ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNK 386
++L + L ++ + P + K+
Sbjct: 150 YGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDI 209
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPT---CVYITHCGNFVLIGYSSGHVDRFNIQS 443
+ ++ + + ++ F+++
Sbjct: 210 DPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEK 269
Query: 444 GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN 503
A + V VS + V GG + + + T + + L
Sbjct: 270 NASIKRVPLPHSYYSV-----NVSTD-GSTVWLGGALGDLAAYDAE-TLE-KKGQVDLPG 321
Query: 504 G 504
Sbjct: 322 N 322
Score = 35.6 bits (80), Expect = 0.016
Identities = 12/115 (10%), Positives = 30/115 (26%), Gaps = 11/115 (9%)
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR----THQESSMLAVCLDDFTVN 527
+++ + V + + I + + A ++
Sbjct: 2 DYILAPARPDKLVVIDTE-KMA-VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLV 59
Query: 528 IIDIDTCTIIRKLSGHMGQ-----LTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577
ID+ T + ++ + L A SPD + L + +
Sbjct: 60 KIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114
Score = 27.5 bits (59), Expect = 4.9
Identities = 2/24 (8%), Positives = 8/24 (33%)
Query: 557 RWLITASMDCTIRVWDIPSSQLID 580
+++ + + V D +
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDK 25
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 63.9 bits (153), Expect = 1e-11
Identities = 25/298 (8%), Positives = 76/298 (25%), Gaps = 8/298 (2%)
Query: 284 GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNL 343
G + ++R GH+ + + + SA + + ++ + SN+ A
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINSWDISTGISNRVFPDVHATMITG 60
Query: 344 KRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLV 403
+ + + G + +A + + S
Sbjct: 61 IKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYK 120
Query: 404 PERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG-- 461
+ + + V + + ++ S ++ +
Sbjct: 121 HIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPA 180
Query: 462 ---VRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLA 518
++ + ++ ++ LA
Sbjct: 181 EITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLA 240
Query: 519 VCLDDFTVNIIDIDT--CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
D +V + +++ I H ++ + +++A D I+ W++P
Sbjct: 241 TGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298
Score = 53.1 bits (125), Expect = 3e-08
Identities = 40/287 (13%), Positives = 76/287 (26%), Gaps = 9/287 (3%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264
+TALS DG + S GH+ W++ H ++TG L
Sbjct: 13 KAITALSSSADGK-TLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFT 71
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
S D+ + + + + + + G+ + T
Sbjct: 72 VSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLT 131
Query: 325 KSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGK 384
+ S + +A +N + + L S A
Sbjct: 132 EVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNG 191
Query: 385 NKVSLWSFY-----KSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRF 439
+ S ++ L +K CV + + G V +
Sbjct: 192 AFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVW 251
Query: 440 NIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
N+ + + V V+ N ++S G D +K W
Sbjct: 252 NMNKPSDHPII--IKGAHAMSSVNSVIWLN-ETTIVSAGQDSNIKFW 295
Score = 51.9 bits (122), Expect = 8e-08
Identities = 13/49 (26%), Positives = 20/49 (40%)
Query: 535 TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
+I + GH +T S D + L +A + I WDI + F
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFP 51
Score = 29.6 bits (64), Expect = 0.97
Identities = 12/94 (12%), Positives = 31/94 (32%), Gaps = 5/94 (5%)
Query: 50 CVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAW----RRGIDIVG 105
+ + H + ++ + S +N + W I+
Sbjct: 204 IPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIII 263
Query: 106 TYKGHTSPVHLIL-PFGPHLISVDEESNVKVWDI 138
S V+ ++ ++S ++SN+K W++
Sbjct: 264 KGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
Score = 28.8 bits (62), Expect = 1.9
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Query: 106 TYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIK 139
GH + + G L S D E ++ WDI
Sbjct: 7 VRYGHNKAITALSSSADGKTLFSADAEGHINSWDIS 42
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 62.8 bits (151), Expect = 3e-11
Identities = 18/326 (5%), Positives = 67/326 (20%), Gaps = 11/326 (3%)
Query: 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLR-IREGHSAPPNYIQFYGNSSDNILSAAGDS 317
++ ++ N L + D A + + + P ++ +
Sbjct: 7 GHEYMIVTNYPNNLHVV--DVA--SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYG 62
Query: 318 TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNN- 376
+ + + + + ++S + + + + L
Sbjct: 63 DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPP 122
Query: 377 ---IAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433
+ + G + +F + + + G + +
Sbjct: 123 RLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLR 182
Query: 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK 493
+ + + Q + K
Sbjct: 183 NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKT 242
Query: 494 PPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFS 553
L + + + + D+ +I+ + F
Sbjct: 243 HTQEFADLTELYFTGLRSPKDPNQIYGVLN-RLAKYDLKQRKLIKAAN-LDHTYYCVAFD 300
Query: 554 PDSRWLITASMDCTIRVWDIPSSQLI 579
L + V++ + + +
Sbjct: 301 KKGDKLYLGGTFNDLAVFNPDTLEKV 326
Score = 55.1 bits (131), Expect = 8e-09
Identities = 34/350 (9%), Positives = 89/350 (25%), Gaps = 12/350 (3%)
Query: 210 LSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN-EPLLVTSSP 268
+ + M+ + +L V ++ V + A + V ++
Sbjct: 2 PALKAGHE-YMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 269 DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328
+ D + F + + A + T R+ +
Sbjct: 61 YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 120
Query: 329 SNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVS 388
+ ++A+ K + +++ + L + TGK V+
Sbjct: 121 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMR--AADDGSLYVAGPDIYKMDVKTGKYTVA 178
Query: 389 LWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS--SGHVDRFNIQSGAH 446
L ++ + + + F + + +
Sbjct: 179 LPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 238
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
G + + I G + + + K K +++ LD+
Sbjct: 239 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLN-RLAKYDLK-QRKL-IKAANLDHTYY 295
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKL---SGHMGQLTDADFS 553
++ L + + + + DT ++ + G M T F
Sbjct: 296 CVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDMSTTTPQVFI 345
Score = 45.1 bits (105), Expect = 1e-05
Identities = 23/304 (7%), Positives = 70/304 (23%), Gaps = 17/304 (5%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKA-----HRKVVTGAHFLYNEP 261
D V ++ G + +L+ + + + + +
Sbjct: 42 PGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGK 101
Query: 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRI 321
+ + + + +G A P + +
Sbjct: 102 EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT---FPMPRQVYLMRAADDGSL 158
Query: 322 FNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIH 381
+ + ++ R + + +L S +
Sbjct: 159 YVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKD 218
Query: 382 TGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSGHVDRFN 440
++ + Y D+ ++ Y + +++
Sbjct: 219 DKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYD 278
Query: 441 IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK 500
++ + D+ V + GG + V++ T + +++IK
Sbjct: 279 LKQRKLIKAANLDHTYYCV-----AFDKK-GDKLYLGGTFNDLAVFNPD-TLE-KVKNIK 330
Query: 501 LDNG 504
L G
Sbjct: 331 LPGG 334
Score = 34.3 bits (77), Expect = 0.036
Identities = 4/32 (12%), Positives = 10/32 (31%)
Query: 552 FSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
++I + + V D+ S +
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCV 35
Score = 30.9 bits (68), Expect = 0.39
Identities = 23/269 (8%), Positives = 54/269 (20%), Gaps = 11/269 (4%)
Query: 11 TSSNSSKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSP 70
+++ I+ + H + + + VY + +
Sbjct: 57 LNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATV-----NPTQ 111
Query: 71 QHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEE 130
+ D T+ R Y + + GP + +D +
Sbjct: 112 RLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVK 171
Query: 131 SNVKVWDIKAEETYLELSFDNDTFKI----MGKRWNSCVNVLEPSPVVDIIGVGLSNKKI 186
+ + + D + S + +
Sbjct: 172 TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 231
Query: 187 ILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKA 246
L L + L ++L+ R++
Sbjct: 232 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLD 291
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
H F L N L ++
Sbjct: 292 HT--YYCVAFDKKGDKLYLGGTFNDLAVF 318
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 61.4 bits (147), Expect = 9e-11
Identities = 36/366 (9%), Positives = 72/366 (19%), Gaps = 46/366 (12%)
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
++ S G + ++ V +K + + + L I+D
Sbjct: 17 LIAFVSR-GQAFIQDVSGTYV---LKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYD 72
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
E + A
Sbjct: 73 ---YRTGKAEKFEENL--------------------------GNVFAMGVDRNGKFAVVA 103
Query: 339 NRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKS-KM 397
N LE I + IA K+ + ++ +
Sbjct: 104 NDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHV 163
Query: 398 DDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQ-- 455
DM + S + +
Sbjct: 164 YDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVI 223
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL------DNGISFFR 509
P G + +G D P + S
Sbjct: 224 PLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPV 283
Query: 510 THQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIR 569
+ ++ + + D+ T RK++ LTD S D + ++ D I
Sbjct: 284 HGEFAAYYQGAPEKGVLLKYDVKT----RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIY 339
Query: 570 VWDIPS 575
+ +
Sbjct: 340 TFPLEK 345
Score = 48.3 bits (113), Expect = 1e-06
Identities = 20/199 (10%), Positives = 42/199 (21%), Gaps = 7/199 (3%)
Query: 83 FFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEE 142
Y +Y T + +L + S D
Sbjct: 152 ETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLN 211
Query: 143 TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQ 202
E+ ++ N V K + I
Sbjct: 212 FSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIP 271
Query: 203 TWGPVTALSFRTDGPP--MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNE 260
+ S G G L ++++ R+V + +T +
Sbjct: 272 LESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT-----EVKNNLTDLRLSADR 326
Query: 261 PLLVTSSPDNTLKLWIFDK 279
++ D + + +K
Sbjct: 327 KTVMVRKDDGKIYTFPLEK 345
Score = 34.1 bits (76), Expect = 0.045
Identities = 5/162 (3%), Positives = 28/162 (17%), Gaps = 14/162 (8%)
Query: 179 VGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPP-----MMVSGSNTGHLTVWN 233
++ ++ + G ++ +
Sbjct: 202 DPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINV 261
Query: 234 LEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH 293
++ + + + L + R
Sbjct: 262 DPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT--------RKVTEV 313
Query: 294 SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGI 335
++ + ++ D + F + + +
Sbjct: 314 KNNLTDLRLSADRK-TVMVRKDDGKIYTFPLEKPEDERTVET 354
Score = 30.6 bits (67), Expect = 0.47
Identities = 19/203 (9%), Positives = 52/203 (25%), Gaps = 8/203 (3%)
Query: 49 TCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYK 108
K F N ++ LS + +++
Sbjct: 166 MEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPF-VIP 224
Query: 109 GHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVL 168
+ + S + D+ + + + + I + +V
Sbjct: 225 LIPGSPNPTKLVPRSMTSEA--GEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVP 282
Query: 169 EPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGH 228
++ +++ T + + +T L D ++ + G
Sbjct: 283 VHGEFAAYYQGAPEKGVLLKYDVKT----RKVTEVKNNLTDLRLSADRK-TVMVRKDDGK 337
Query: 229 LTVWNLEDRQVENQIKKAHRKVV 251
+ + LE + E ++ R +V
Sbjct: 338 IYTFPLEKPEDERTVETDKRPLV 360
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 59.1 bits (141), Expect = 3e-10
Identities = 37/303 (12%), Positives = 91/303 (30%), Gaps = 30/303 (9%)
Query: 285 RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL----GIASANR 340
+ + R S +Q+ I+S D+T++I++ + + L G +
Sbjct: 6 QRIHCRSETSKGVYCLQYDDQK---IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQ 62
Query: 341 NNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDM 400
+ + + + + + V+ + DM
Sbjct: 63 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM 122
Query: 401 FLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS--GHVDRFNIQSGAHRGSYGHDNQPGH 458
+ + + I +S + +N + + +
Sbjct: 123 ASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 182
Query: 459 VGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLA 518
R ++V+SG +D T+++W + + + ++ +
Sbjct: 183 CLQYRD-------RLVVSGSSDNTIRLWDIEC---GACLRVLEGHEELVRCIRFDNKRIV 232
Query: 519 VCLDDFTVNIIDIDTC---------TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIR 569
D + + D+ +R L H G++ F D ++++S D TI
Sbjct: 233 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL 290
Query: 570 VWD 572
+WD
Sbjct: 291 IWD 293
Score = 41.8 bits (96), Expect = 1e-04
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Query: 479 NDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIR 538
D+++ VW LR + + + + + + D T+ + + TC +R
Sbjct: 113 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVR 172
Query: 539 KLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
L+GH + + R +++ S D TIR+WDI + +
Sbjct: 173 TLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLE 215
Score = 40.6 bits (93), Expect = 3e-04
Identities = 6/32 (18%), Positives = 14/32 (43%)
Query: 552 FSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
D + +++ D TI++WD + +
Sbjct: 21 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILT 52
Score = 40.6 bits (93), Expect = 3e-04
Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 26/189 (13%)
Query: 95 YAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTF 154
A I + GH + V+++ +++S + +KVW+ T
Sbjct: 122 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNT-------------STC 168
Query: 155 KIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRT 214
+ + + ++ G S+ I L +I L V
Sbjct: 169 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR---CIR 225
Query: 215 DGPPMMVSGSNTGHLTVWNLEDRQVENQIK--------KAHRKVVTGAHFLYNEPLLVTS 266
+VSG+ G + VW+L H V F +E +V+S
Sbjct: 226 FDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSS 283
Query: 267 SPDNTLKLW 275
S D+T+ +W
Sbjct: 284 SHDDTILIW 292
Score = 37.5 bits (85), Expect = 0.003
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCT 535
S D+T+KVW+ T + GI+ + ++ D T+ + DI+
Sbjct: 153 SASGDRTIKVWNT-STCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA 209
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577
+R L GH D++ +++ + D I+VWD+ ++
Sbjct: 210 CLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWDLVAAL 249
Score = 36.7 bits (83), Expect = 0.005
Identities = 28/174 (16%), Positives = 55/174 (31%), Gaps = 27/174 (15%)
Query: 71 QHEDDITCLSSDFFHIYT-SANNIIYAWR-RGIDIVGTYKGHTSPVHLILPFGPHLISVD 128
H + + D +I + S + I W + V T GH + + ++S
Sbjct: 136 GHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGS 195
Query: 129 EESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIIL 188
++ +++WDI + + V I G + KI +
Sbjct: 196 SDNTIRLWDI-------------ECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKV 242
Query: 189 HNILTDESLMEFIQTW---------GPVTALSFRTDGPPMMVSGSNTGHLTVWN 233
+++ T G V L F +VS S+ + +W+
Sbjct: 243 WDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF---DEFQIVSSSHDDTILIWD 293
Score = 36.4 bits (82), Expect = 0.006
Identities = 33/256 (12%), Positives = 81/256 (31%), Gaps = 37/256 (14%)
Query: 98 RRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELS--------- 148
R + + + V+ + ++S ++ +K+WD E L+
Sbjct: 2 RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCL 61
Query: 149 -FDNDTFKIMGKRWNSCVNVLEPSPVVDIIG-----------------VGLSNKKIILHN 190
+D V + +++ + ++ I + +
Sbjct: 62 QYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 121
Query: 191 ILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKV 250
+ + + G A++ +VS S + VWN + + R +
Sbjct: 122 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI 181
Query: 251 VTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNI 310
Y + L+V+ S DNT++LW + ++ + I
Sbjct: 182 A---CLQYRDRLVVSGSSDNTIRLW-------DIECGACLRVLEGHEELVRCIRFDNKRI 231
Query: 311 LSAAGDSTLRIFNTKS 326
+S A D +++++ +
Sbjct: 232 VSGAYDGKIKVWDLVA 247
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 58.5 bits (140), Expect = 8e-10
Identities = 20/334 (5%), Positives = 60/334 (17%), Gaps = 39/334 (11%)
Query: 264 VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPP-------NYIQFYGNSSDNILSAAGD 316
+ + T + W+ G L G + S
Sbjct: 38 LPAYFAGTTENWVSCAG--CGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRT 95
Query: 317 STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNN 376
+ +F+ + +E + G
Sbjct: 96 DYVEVFDPVT----------------FLPIADIELPDAPRFSVGPRVHIIGNCASSAC-- 137
Query: 377 IAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHV 436
+ G + + S + D + + T + + ++
Sbjct: 138 LLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPA 197
Query: 437 DRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPL 496
+ + V + + +
Sbjct: 198 AAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRK 257
Query: 497 RSIKLDNGISFFRTHQESSMLAVCLDDF---------TVNIIDIDTCTIIRKLSGHMGQL 547
G + + + + + + + +S
Sbjct: 258 ADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-HDS 316
Query: 548 TDADFSPDSRWLI--TASMDCTIRVWDIPSSQLI 579
+ D ++ + ++D S Q
Sbjct: 317 DAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350
Score = 43.8 bits (102), Expect = 4e-05
Identities = 22/304 (7%), Positives = 69/304 (22%), Gaps = 33/304 (10%)
Query: 210 LSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF-------LYNEPL 262
+ + G T ++ V++ I+ + + L
Sbjct: 79 FALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACL 138
Query: 263 LVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322
L + ++ + S + ++ + ++L
Sbjct: 139 LFFLFGSSAAAGL--SVPG--ASDDQLTKSASCFH----IHPGAAATHYLGSCPASLAAS 190
Query: 323 NTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDW--NNIAAI 380
+ + + + A + ++ + D
Sbjct: 191 DLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA----VASSILQGDIPAAGATMK 246
Query: 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFN 440
S + +V AK + I + ++ +
Sbjct: 247 AAIDGNESGRKADNFRSAGFQMV------AKLKNTDGIMILTVEHSRSCLAAAENTSSVT 300
Query: 441 IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK 500
G G + + + D + + + + ++ + + S++
Sbjct: 301 ASVGQTSGPISNGHDSDAI----IAAQDGASDNYANSAGTEVLDIYDAA-SDQ-DQSSVE 354
Query: 501 LDNG 504
LD G
Sbjct: 355 LDKG 358
Score = 28.8 bits (63), Expect = 2.0
Identities = 6/41 (14%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 205 GPVTALSFRTDGPPMM-VSGSNTGHLTVWNLEDRQVENQIK 244
A+ DG + + T L +++ Q ++ ++
Sbjct: 314 HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354
Score = 27.3 bits (59), Expect = 6.4
Identities = 10/96 (10%), Positives = 18/96 (18%), Gaps = 8/96 (8%)
Query: 203 TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLY--NE 260
T + + + Q I H
Sbjct: 270 AKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHD--SDAIIAAQDGAS 327
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
S+ L ++ D A + + E P
Sbjct: 328 DNYANSAGTEVLDIY--DAA--SDQDQSSVELDKGP 359
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 54.9 bits (130), Expect = 1e-08
Identities = 37/361 (10%), Positives = 80/361 (22%), Gaps = 59/361 (16%)
Query: 242 QIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREG--------H 293
KAH + V+ S D LK+W D + H
Sbjct: 8 NAGKAHDADIFSVSA--CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHH 65
Query: 294 SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353
I+ + + + L + E K + +L+ ++
Sbjct: 66 VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKV-----------IFEKLDLLD 114
Query: 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCK----- 408
+G + ++ ++ K +W F+ + L
Sbjct: 115 SDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQ 174
Query: 409 ------QAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGV 462
T V I+ G + + + +
Sbjct: 175 GTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI 234
Query: 463 RGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLD 522
R V ++ + + +T +
Sbjct: 235 RSVKFSPQGSLLAIAHDSNSFGCITLYETE---------------------------FGE 267
Query: 523 DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
+ + H + F+ L +A D +R WD+ + + I
Sbjct: 268 RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTL 327
Query: 583 Q 583
Sbjct: 328 N 328
Score = 45.2 bits (105), Expect = 1e-05
Identities = 43/422 (10%), Positives = 102/422 (24%), Gaps = 46/422 (10%)
Query: 101 IDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTF--KIMG 158
I K H + + + +S + +KVWD K + F K
Sbjct: 4 IATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGL 63
Query: 159 KRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPP 218
+ + + + ++ + ++ + I ++ + I + +
Sbjct: 64 HHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKH--- 120
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
+ W L+ +++ HR V T + ++ +
Sbjct: 121 -----------SFWALKWGASNDRLLS-HRLVATDVKGTTYIWKFHPFADESNSLTLNWS 168
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL-SAAGDSTLRIFNTKSETSNKNLGIAS 337
+ S + S ++ + + T++I +
Sbjct: 169 PTLELQGTVESPMTPSQFATSVDI---SERGLIATGFNNGTVQISELSTL---------- 215
Query: 338 ANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKM 397
N I L +N T +
Sbjct: 216 -RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSV 274
Query: 398 DDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQP 456
+ A S + G + G + +++++ + H +
Sbjct: 275 PTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDI 334
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPP--------LRSIKLDNGISFF 508
+ D + G V K+ + L + LD I +F
Sbjct: 335 EIE--EDILAVDEHGDSLAEPG---VFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWF 389
Query: 509 RT 510
R
Sbjct: 390 RE 391
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 51.1 bits (120), Expect = 2e-07
Identities = 34/331 (10%), Positives = 93/331 (28%), Gaps = 25/331 (7%)
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
R T + + + + D +++ S+ ++F
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK 75
Query: 307 SDNIL-SAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFS 365
L S + ++ + + ++ ++N K ++
Sbjct: 76 GSQYLCSGDESGKVIVWGWTFDKESNSV-----------------EVNVKSEFQVLAGPI 118
Query: 366 FGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGN 425
++ + + + + G++ ++ + S + + + +
Sbjct: 119 SDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRI----NACHLKQSRPMR 174
Query: 426 FVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKV 485
+ +G V H Q V V I + +
Sbjct: 175 SMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFD 234
Query: 486 WHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMG 545
+ K + G F + +S A D T+ + D+ T ++K +
Sbjct: 235 GKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQ 294
Query: 546 QLTDADFS---PDSRWLITASMDCTIRVWDI 573
QL + + +I+ S+D T+ +++
Sbjct: 295 QLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 34.5 bits (77), Expect = 0.034
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 554 PDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
DS+ T D TIRVWD+ +S+ + +
Sbjct: 261 LDSQKFATVGADATIRVWDVTTSKCVQKWT 290
Score = 31.4 bits (69), Expect = 0.30
Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Query: 511 HQESSMLAVCL-DDFTVNIIDIDTCTI--IRKLSGHMGQ-LTDADFSP--DSRWLITASM 564
++ +A V +D + + + +GH +T FSP S++L +
Sbjct: 26 DPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDE 85
Query: 565 DCTIRVWDIPSSQLIDCFQ 583
+ VW + + +
Sbjct: 86 SGKVIVWGWTFDKESNSVE 104
Score = 31.0 bits (68), Expect = 0.41
Identities = 19/187 (10%), Positives = 46/187 (24%), Gaps = 2/187 (1%)
Query: 50 CVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKG 109
G N +S Q + S T ++ + +G +
Sbjct: 139 NFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD 198
Query: 110 HTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLE 169
T E + V + + S + + +
Sbjct: 199 RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFAL 258
Query: 170 PSPVVDIIGVGLSNKKIILHNILTDESLMEFI--QTWGPVTALSFRTDGPPMMVSGSNTG 227
++ I + ++ T + + ++ + + G ++S S G
Sbjct: 259 SWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDG 318
Query: 228 HLTVWNL 234
L + L
Sbjct: 319 TLNFYEL 325
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 50.3 bits (118), Expect = 3e-07
Identities = 36/368 (9%), Positives = 100/368 (27%), Gaps = 32/368 (8%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+T L F + +++G++ + V++ +++ Q+ H V + + L+ S
Sbjct: 16 ITCLQFEDN---YVITGADDKMIRVYDSINKKFLLQLS-GHDGGVWALKYAHGGILVSGS 71
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
+ I + +S + I++ + D+TL ++
Sbjct: 72 TDRTVRVWDIKKGCCTH----VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPK 127
Query: 327 ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNK 386
E+S + G E+ P V
Sbjct: 128 ESSVPDHG-------------------EEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS 168
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
D+ +V + + + +
Sbjct: 169 GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIW 228
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
G + ++ ++S D +++ W + + I+
Sbjct: 229 DLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAIT 288
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRK-LSGHMGQLTDADFSPDSRWLITASMD 565
F + ++L ++ NI ++ + ++ + Q+ +F + + D
Sbjct: 289 TF--YVSDNILVSGSEN-QFNIYNLRSGKLVHANILKDADQIWSVNFKGKTL-VAAVEKD 344
Query: 566 CTIRVWDI 573
+ +
Sbjct: 345 GQSFLEIL 352
Score = 44.5 bits (103), Expect = 2e-05
Identities = 37/338 (10%), Positives = 98/338 (28%), Gaps = 27/338 (7%)
Query: 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304
+ H V + + ++T + D ++++ N + L GH +++
Sbjct: 9 RGHMTSVITC-LQFEDNYVITGADDKMIRVYDSI----NKKFLLQLSGHDGGVWALKY-- 61
Query: 305 NSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQF 364
+ IL + + + + L+ + K I V+
Sbjct: 62 -AHGGILVSGSTDRTVRVWDIKKGCCTH-----VFEGHNSTVRCLDIVEYKNIKYIVTGS 115
Query: 365 SFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCG 424
+++ + + + ++ + V + ++ G
Sbjct: 116 RDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR----GHMASVRTVSGHG 171
Query: 425 NFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVK 484
N V+ G + +++ + + D+ + IS D T++
Sbjct: 172 NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYS-----TIYDHERKRCISASMDTTIR 226
Query: 485 VWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
+W + G + S + +I D RK S H
Sbjct: 227 IWDLENGELMYTL-----QGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHH 281
Query: 545 GQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
L+ S ++ + + ++++ S +L+
Sbjct: 282 TNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHAN 319
Score = 44.1 bits (102), Expect = 3e-05
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Query: 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL 257
+F ++A++ ++VSGS ++NL ++ + + +F
Sbjct: 275 RKFSYHHTNLSAITTFYVSDNILVSGSE-NQFNIYNLRSGKLVHANILKDADQIWSVNFK 333
Query: 258 YNEPLLVTSSPDNTLKLWIFD 278
L+ D L I D
Sbjct: 334 GKT-LVAAVEKDGQSFLEILD 353
Score = 43.0 bits (99), Expect = 6e-05
Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 540 LSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
L GHM + + ++IT + D IRV+D + + +
Sbjct: 8 LRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLS 50
Score = 40.3 bits (92), Expect = 5e-04
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
E + + DD + + D + +LSGH G + ++ L++ S D T+RVWD
Sbjct: 22 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWD 80
Query: 573 IPSSQLIDCFQ 583
I F+
Sbjct: 81 IKKGCCTHVFE 91
Score = 40.3 bits (92), Expect = 5e-04
Identities = 52/350 (14%), Positives = 115/350 (32%), Gaps = 37/350 (10%)
Query: 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
S + L+ + + G +K I +++ + + L++ G V AL + G ++V
Sbjct: 13 TSVITCLQFED--NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG--ILV 68
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHR-KVVTGAHFLYNEPLLVTSSPDNTLKLW----- 275
SGS + VW+++ + + + N +VT S DNTL +W
Sbjct: 69 SGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKE 128
Query: 276 --------------IFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRI 321
+F + N + + GH A + +GN ++S + D+TL +
Sbjct: 129 SSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGN---IVVSGSYDNTLIV 185
Query: 322 FNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIH 381
++ L + + + ++ + + +
Sbjct: 186 WDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL 245
Query: 382 TGKNKVSLWSFYKSKMDDMF-----LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHV 436
G ++S + D R + + + + + +L+ S
Sbjct: 246 VGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQF 305
Query: 437 DRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
+ +N++SG H N + V +V + D +
Sbjct: 306 NIYNLRSGKLV----HANILKDADQIWSVNFKG-KTLVAAVEKDGQSFLE 350
Score = 27.5 bits (59), Expect = 4.1
Identities = 12/101 (11%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Query: 136 WDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE 195
+ + A +D + + ++ ++ + V D I V S + ++N+ + +
Sbjct: 255 FLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGK 314
Query: 196 SLMEFIQT-WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235
+ I + +++F+ ++ + G + L+
Sbjct: 315 LVHANILKDADQIWSVNFKGKT--LVAAVEKDGQSFLEILD 353
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 48.4 bits (113), Expect = 1e-06
Identities = 25/309 (8%), Positives = 63/309 (20%), Gaps = 33/309 (10%)
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
++ + I HS + S S +RI++T
Sbjct: 34 YCNGTSVYTVPVG----SLTDTEIYTEHSHQTTVAKTS-PSGYYCASGDVHGNVRIWDTT 88
Query: 326 SETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKN 385
T F P ++ G
Sbjct: 89 QTTHILK------------------TTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 130
Query: 386 KVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGA 445
+ + S + + I+ + + + +
Sbjct: 131 FL--FDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH 188
Query: 446 HRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGI 505
+ + P + G V + +
Sbjct: 189 TKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS-------GSV 241
Query: 506 SFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMG-QLTDADFSPDSRWLITASM 564
+ + +A D T+ I ++ T + + + + + L++ S
Sbjct: 242 FGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISA 301
Query: 565 DCTIRVWDI 573
+ I +
Sbjct: 302 NGFINFVNP 310
Score = 48.4 bits (113), Expect = 1e-06
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ C +V + + + T + H Q T A SP + + + +R+WD
Sbjct: 29 GDKIQYCNGT-SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDT 87
Query: 574 PSSQLIDCFQ 583
+ I
Sbjct: 88 TQTTHILKTT 97
Score = 41.8 bits (96), Expect = 1e-04
Identities = 31/291 (10%), Positives = 72/291 (24%), Gaps = 23/291 (7%)
Query: 45 TLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCL--SSDFFHIYTSANN----IIYAWR 98
C G + + + +H T S ++ + + I +
Sbjct: 30 DKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ 89
Query: 99 RGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMG 158
+ T + PV I + E FD T
Sbjct: 90 TTHILKTTIPVFSGPVKDISWDSES-------KRIAAVGEGRERFGHVFLFDTGTSNGNL 142
Query: 159 KRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPP 218
+N ++ P + S+ +
Sbjct: 143 TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS 202
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKA------HRKVVTGAHFLYNEPLLVTSSPDNTL 272
+ S G + ++N D + H V G + + + ++S D T+
Sbjct: 203 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTI 262
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
K+W ++ + + + + ++S + + + N
Sbjct: 263 KIWNVA----TLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
Score = 38.3 bits (87), Expect = 0.002
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
K H G + +SPD + +AS D TI++W++ + ++
Sbjct: 228 EDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIP 277
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 46.7 bits (110), Expect = 5e-06
Identities = 17/118 (14%), Positives = 34/118 (28%), Gaps = 8/118 (6%)
Query: 468 DNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVN 527
D N ++ + + + T + + + R L V D VN
Sbjct: 29 DLENLFSVTLRDAGQIALIDGS-TYEI-KTVLDTGYAVHISRLSASGRYLFVIGRDGKVN 86
Query: 528 IIDIDTCTI-----IRKLSGHMGQLTDADFSPDSRWLI-TASMDCTIRVWDIPSSQLI 579
+ID+ I+ S T + ++ I A + D + +
Sbjct: 87 MIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK 144
Score = 34.0 bits (77), Expect = 0.048
Identities = 35/362 (9%), Positives = 79/362 (21%), Gaps = 45/362 (12%)
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
V+ + G + + + +++ + V + + L D + +
Sbjct: 34 FSVTLRDAGQIALIDGSTYEIKTVLD--TGYAVHISRLSASGRYLFVIGRDGKVNMIDLW 91
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
+ I+ G S + ++ + AG I
Sbjct: 92 -MKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAY-----------WPPQYVIMDG 138
Query: 339 NRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMD 398
K+ M + K+ L
Sbjct: 139 ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLV-----DYT 193
Query: 399 DMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGH 458
D+ + A++ F+ + + + + G Q H
Sbjct: 194 DLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPH 253
Query: 459 VGGVRGVVSDNLNQIVISGG-------NDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTH 511
G V + + T H K L G F +TH
Sbjct: 254 PGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTH 313
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ + L+ +++ + D + + D +
Sbjct: 314 P-----------------NSQYLYVDATLNPE-AEISGSVAVFDIKAMTGDGSDPEFKTL 355
Query: 572 DI 573
I
Sbjct: 356 PI 357
Score = 32.5 bits (73), Expect = 0.16
Identities = 28/273 (10%), Positives = 72/273 (26%), Gaps = 31/273 (11%)
Query: 124 LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGK-RWNSCVNVLEPSPVVDIIGVGLS 182
+++ + + + D T++I V++ S + V
Sbjct: 35 SVTLRDAGQIALIDG-------------STYEIKTVLDTGYAVHISRLSASGRYLFVIGR 81
Query: 183 NKKIILHNILTDE-----SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR 237
+ K+ + ++ E + + T+ + + + + E
Sbjct: 82 DGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 141
Query: 238 QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPP 297
+ + + + +S + + K G L+ +
Sbjct: 142 EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRP-EFIVNVKETGKILLVDY----TDLN 196
Query: 298 NYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFI 357
N ++ + D + R F T + NK ++ +L + +
Sbjct: 197 NLKTTEISAERFLHDGGLDGSHRYFITAANARNK-------LVVIDTKEGKLVAIEDTGG 249
Query: 358 LPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLW 390
P A H G + V+L
Sbjct: 250 QTPHPGRGANFVHPTFGPVWATSHMGDDSVALI 282
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 46.3 bits (108), Expect = 6e-06
Identities = 40/344 (11%), Positives = 90/344 (26%), Gaps = 31/344 (9%)
Query: 259 NEPL-LVTSSPDNTLKLWIFDKADGN------------GRLLRIREGHSAPP-------N 298
+EP L +PD ++++ D A GR++ + +G P +
Sbjct: 1 DEPRILEAPAPDAR-RVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGS 59
Query: 299 YIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFIL 358
+I I + +F+ + ++ + A R + + L
Sbjct: 60 FIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWM------TSL 113
Query: 359 PPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCV 418
P + GK + + V
Sbjct: 114 TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKV 173
Query: 419 YITHCGNFVLIGYSSGHVDRFN-IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISG 477
G + H + I A+ G P + G + + + + +
Sbjct: 174 AFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPA 233
Query: 478 GNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTII 537
T + + + V ++D T +
Sbjct: 234 VEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL 293
Query: 538 RKLSGHMGQLTDADFSPDSRWLI--TASMDCTIRVWDIPSSQLI 579
K ++ + S D + L+ ++ D T+ + D S + +
Sbjct: 294 AKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEEL 336
Score = 39.4 bits (90), Expect = 8e-04
Identities = 46/359 (12%), Positives = 91/359 (25%), Gaps = 38/359 (10%)
Query: 205 GPVTALSFRTDGPPMMVS----GSNTGHLTVWNLEDRQVENQIKKAHRKVVT---GAHFL 257
P + D + V+ + V + E +V I F+
Sbjct: 2 EPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFI 61
Query: 258 Y----NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSA 313
+ + ++++ D P G
Sbjct: 62 AHASTVFSRIARGERTDYVEVF--DPVTL-----LPTADIELPDAPRFLVGTYPWMTSLT 114
Query: 314 AGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKD 373
TL + + + + KR + F P + F +D
Sbjct: 115 PDGKTLLFYQFSPAPAVGVVDLEG---KAFKRMLDVPDCYHIFPTAPDTFFMHC----RD 167
Query: 374 WNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433
+ + + +D FL+ K V+ T+ G I SS
Sbjct: 168 GSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG--RLVWPTYTGKIHQIDLSS 225
Query: 434 GHVDRFNIQSGAHRGSYGHDNQP-------GHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
G +P H R + + + V V
Sbjct: 226 GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVL 285
Query: 487 HFKQTGKPPLRSIKLDNGISF--FRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGH 543
K TG+ L ++ + I ++ + A+ D T+ I D ++ +R ++
Sbjct: 286 DAK-TGER-LAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 342
Score = 35.9 bits (81), Expect = 0.010
Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 12/71 (16%)
Query: 523 DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM----------DCTIRVWD 572
+ID + +I + G G L + + D ++ AS + V+D
Sbjct: 27 VTQQFVIDGEAGRVIGMIDG--GFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFD 84
Query: 573 IPSSQLIDCFQ 583
+ +
Sbjct: 85 PVTLLPTADIE 95
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 44.9 bits (105), Expect = 2e-05
Identities = 12/70 (17%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 510 THQESSMLAVCL-DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
++ +V L D + ++D D+ I++ + + + S R+L+ D I
Sbjct: 27 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARI 85
Query: 569 RVWDIPSSQL 578
+ D+ + +
Sbjct: 86 DMIDLWAKEP 95
Score = 29.5 bits (65), Expect = 1.2
Identities = 35/336 (10%), Positives = 84/336 (25%), Gaps = 50/336 (14%)
Query: 262 LLVTSSPDNTLKLWIFDKADGN-GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLR 320
VT + L DG+ +++++ + A +I S +L D+ +
Sbjct: 34 FSVTLRDAGQIALV-----DGDSKKIVKVIDTGYAV--HISRMSASGRYLLVIGRDARID 86
Query: 321 IFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAI 380
+ + ++ K I + + A
Sbjct: 87 MIDLWAKEPTKVAEIKIGIEAR--------------------SVESSKFKGYEDRYTIAG 126
Query: 381 HTGKNKVSLW--SFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDR 438
+ ++ + K Q +P I +
Sbjct: 127 AYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE-TG 185
Query: 439 FNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK----- 493
+ G + D+ ++ ++ N+ + +
Sbjct: 186 KVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALV 245
Query: 494 PPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI-------IRKLSGHMGQ 546
++ G +F L D ++++I D + +L G G
Sbjct: 246 DVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG 305
Query: 547 LTDADFSPDSRWLI-------TASMDCTIRVWDIPS 575
P S L A + ++ V+D+ +
Sbjct: 306 SLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN 341
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 42.2 bits (97), Expect = 1e-04
Identities = 8/63 (12%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 522 DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPD-SRWLITASMDCTIRVWDIPSSQLID 580
+ +++ID+ + + + A SPD ++ + + + + D ++ +I
Sbjct: 10 ESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIA 68
Query: 581 CFQ 583
Sbjct: 69 TVP 71
Score = 39.5 bits (90), Expect = 7e-04
Identities = 22/274 (8%), Positives = 63/274 (22%), Gaps = 3/274 (1%)
Query: 221 VSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA 280
++ S + +++V ++ +V I + + V ++ N + +
Sbjct: 6 IANSESDNISVIDVTSNKVTATIP-VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 281 DGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANR 340
+ + + ++ S + A
Sbjct: 65 NVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALS 124
Query: 341 NNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDM 400
+ K+ ++ + + + T + + S +
Sbjct: 125 PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISV 184
Query: 401 FLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVG 460
Y + FN S G+ +
Sbjct: 185 IDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP 244
Query: 461 GVRGV-VSDNLNQIVISGGNDQTVKVWHFKQTGK 493
G+ V+ + ++ ++ TV V T
Sbjct: 245 DPAGIAVTPDGKKVYVALSFCNTVSVIDTA-TNT 277
Score = 37.2 bits (84), Expect = 0.004
Identities = 13/78 (16%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWL-ITASMD 565
++ + V TV++ID T I ++ +PD + + + S
Sbjct: 207 VNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFC 265
Query: 566 CTIRVWDIPSSQLIDCFQ 583
T+ V D ++ +
Sbjct: 266 NTVSVIDTATNTITATMA 283
Score = 32.5 bits (72), Expect = 0.12
Identities = 6/56 (10%), Positives = 16/56 (28%)
Query: 189 HNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK 244
+ I ++ DG + V+ S ++V + + +
Sbjct: 228 MIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283
Score = 29.8 bits (65), Expect = 0.81
Identities = 28/285 (9%), Positives = 75/285 (26%), Gaps = 14/285 (4%)
Query: 264 VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
+ +S + + + D + ++ S P + + ++ A + + I +
Sbjct: 6 IANSESDNISVI--DVT--SNKVTATIPVGSNP-MGAVISPDGTKVYVANAHSNDVSIID 60
Query: 324 TKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSF------GLAREKDWNNI 377
T + + S+ + + + +S G +
Sbjct: 61 TATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLG 120
Query: 378 AAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVD 437
A+ K+ + + + + V + + I + + ++
Sbjct: 121 LALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSM 180
Query: 438 RFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLR 497
++ G+ + TV T K
Sbjct: 181 SISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVS-MIDTGTNKI-TA 238
Query: 498 SIKLDNGISFFRTHQESSMLAV-CLDDFTVNIIDIDTCTIIRKLS 541
I + + + + V TV++ID T TI ++
Sbjct: 239 RIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283
Score = 28.3 bits (61), Expect = 2.8
Identities = 5/48 (10%), Positives = 15/48 (31%)
Query: 201 IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHR 248
I DG + V+ +++ +++ + V +
Sbjct: 28 IPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS 75
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 38.3 bits (87), Expect = 0.002
Identities = 14/104 (13%), Positives = 30/104 (28%), Gaps = 5/104 (4%)
Query: 473 IVISGGNDQTVKVWHFKQTGKP-PLRSIKLDNGISFFRTHQESSMLAVCL-DDFTVNIID 530
+ I+ Q + VW+ G + + + + + L V + +F V
Sbjct: 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65
Query: 531 IDTCTIIRKLSGHM---GQLTDADFSPDSRWLITASMDCTIRVW 571
I + G LT +++ S +
Sbjct: 66 IAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSV 109
Score = 37.9 bits (86), Expect = 0.002
Identities = 30/320 (9%), Positives = 73/320 (22%), Gaps = 22/320 (6%)
Query: 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDST 318
+ + + S + +W + +G L ++ + + + +
Sbjct: 3 KQTVYIASPESQQIHVWNLN-HEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFR 60
Query: 319 LRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIA 378
+ + + ++ L QF F + ++
Sbjct: 61 VLAYRIAPDD----------GALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVT 110
Query: 379 AIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDR 438
+ G + + + I +
Sbjct: 111 RLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAE 170
Query: 439 FNIQSGAH-RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLR 497
GA R H N+ S ++ ++ GN + V+ R
Sbjct: 171 VTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTR 230
Query: 498 SIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM---GQLTDADFSP 554
T + A + + + + G Q +
Sbjct: 231 -----WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDH 285
Query: 555 DSRWLITASMDC-TIRVWDI 573
++LI A I V++I
Sbjct: 286 SGKYLIAAGQKSHHISVYEI 305
Score = 31.7 bits (70), Expect = 0.24
Identities = 26/301 (8%), Positives = 62/301 (20%), Gaps = 20/301 (6%)
Query: 196 SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAH 255
+L + + G V + D + V + + + + H
Sbjct: 28 TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTH 87
Query: 256 FLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG 315
+++ A P + D SA
Sbjct: 88 --------ISTDHQGQFVFVGSYNAGNVSVTRL----EDGLPVGVVDVVEGLDGCHSANI 135
Query: 316 DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWN 375
R + ++ ++ +L ++ E + P F N
Sbjct: 136 SPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN 195
Query: 376 NIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGH 435
+ + + + + S
Sbjct: 196 ELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLIT 255
Query: 436 VDRFNIQSGAHR--GSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF-KQTG 492
V + G + QP V + ++ +G + V+ + G
Sbjct: 256 VFSVSEDGSVLSKEGFQPTETQPRGF-----NVDHSGKYLIAAGQKSHHISVYEIVGEQG 310
Query: 493 K 493
Sbjct: 311 L 311
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 36.5 bits (83), Expect = 0.006
Identities = 8/62 (12%), Positives = 20/62 (32%), Gaps = 12/62 (19%)
Query: 528 IIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITA----------SMDCTIRVWDIPSSQ 577
+ D D ++ ++ G G +PD + + A + + + D +
Sbjct: 2 VYDADAKKLLGQIDG--GFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLD 59
Query: 578 LI 579
Sbjct: 60 HA 61
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 32.9 bits (74), Expect = 0.090
Identities = 13/180 (7%), Positives = 34/180 (18%), Gaps = 23/180 (12%)
Query: 415 PTCVYITHCGNFVLI---GYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVS---- 467
P + + V A G+ ++ G +
Sbjct: 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQEN 144
Query: 468 ----------DNLNQIVISGGNDQTVKVWHFKQTGK----PPLRSIKLDNGISFFRTHQE 513
++ + +G+ + + + + H
Sbjct: 145 TGIHGMVFDPTETYLYSADLTANK-LWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPT 203
Query: 514 SSMLAVCL-DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+ L + + ID T + + H L +
Sbjct: 204 GNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALT 263
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal
domain {Paracoccus denitrificans [TaxId: 266]}
Length = 459
Score = 30.1 bits (68), Expect = 0.88
Identities = 7/39 (17%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 525 TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS 563
+D D + ++ G L + D + +W + S
Sbjct: 174 VFTAVDADKWEVAWQVLV-SGNLDNCDADYEGKWAFSTS 211
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 29.5 bits (66), Expect = 1.3
Identities = 18/101 (17%), Positives = 36/101 (35%), Gaps = 14/101 (13%)
Query: 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533
SGG+ V+V G P +R + I F + +S+ + + + I+ D
Sbjct: 14 FWSGGHQGEVRVL-----GVPSMRELMR---IPVF--NVDSATGWG-ITNESKEILGGDQ 62
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWL-ITASMDCTIRVWDI 573
H ++ D D ++L I + + +
Sbjct: 63 QY--LNGDCHHPHISMTDGRYDGKYLFINDKANTRVARIRL 101
Score = 27.6 bits (61), Expect = 5.1
Identities = 6/41 (14%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 525 TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMD 565
ID +T + ++ G L + D ++ + +
Sbjct: 157 MFTAIDAETMDVAWQVIVD-GNLDNTDADYTGKYATSTCYN 196
>d1t9ba2 c.36.1.5 (A:89-263) Acetohydroxyacid synthase catalytic
subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 175
Score = 26.3 bits (57), Expect = 9.2
Identities = 10/69 (14%), Positives = 20/69 (28%), Gaps = 5/69 (7%)
Query: 55 FHVYGCNHFKLLSVSPQHEDDITCL---SSDFFHIYTSANNIIYAWRRGIDIVGTYKGHT 111
G + E D+ + + + + S + +I + G
Sbjct: 97 VVFTGQVPTSAIGTDAFQEADVVGISRSCTKWNVMVKSVEELPLRINEAFEIATS--GRP 154
Query: 112 SPVHLILPF 120
PV + LP
Sbjct: 155 GPVLVDLPK 163
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.135 0.416
Gapped
Lambda K H
0.267 0.0458 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,239,507
Number of extensions: 106058
Number of successful extensions: 605
Number of sequences better than 10.0: 1
Number of HSP's gapped: 423
Number of HSP's successfully gapped: 149
Length of query: 583
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 493
Effective length of database: 1,171,896
Effective search space: 577744728
Effective search space used: 577744728
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.6 bits)