Query psy14913
Match_columns 166
No_of_seqs 155 out of 1207
Neff 8.4
Searched_HMMs 29240
Date Sat Aug 17 00:09:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14913.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14913hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xve_A Flavin-containing monoo 99.9 8.2E-24 2.8E-28 177.4 12.4 156 1-162 273-432 (464)
2 2gv8_A Monooxygenase; FMO, FAD 99.7 1E-17 3.5E-22 139.2 11.0 114 1-117 289-409 (447)
3 3d1c_A Flavin-containing putat 96.4 0.00057 1.9E-08 54.1 0.2 56 25-80 291-351 (369)
4 3gwf_A Cyclohexanone monooxyge 92.8 0.11 3.7E-06 43.9 4.6 41 24-64 411-453 (540)
5 3uox_A Otemo; baeyer-villiger 91.7 0.29 9.8E-06 41.4 5.9 41 24-64 418-462 (545)
6 4ap3_A Steroid monooxygenase; 87.8 0.36 1.2E-05 40.8 3.4 41 24-64 423-467 (549)
7 1w4x_A Phenylacetone monooxyge 87.2 0.85 2.9E-05 38.2 5.4 41 24-64 418-462 (542)
8 4a9w_A Monooxygenase; baeyer-v 61.2 14 0.00049 27.9 5.4 63 1-65 282-349 (357)
9 2bc0_A NADH oxidase; flavoprot 30.7 77 0.0026 25.7 5.3 63 1-67 288-362 (490)
10 3klj_A NAD(FAD)-dependent dehy 30.2 69 0.0024 25.2 4.8 36 32-67 255-295 (385)
11 1vdc_A NTR, NADPH dependent th 25.9 83 0.0028 23.5 4.4 43 30-72 283-331 (333)
12 3h8l_A NADH oxidase; membrane 24.6 38 0.0013 26.6 2.3 40 27-66 292-334 (409)
13 2cdu_A NADPH oxidase; flavoenz 21.2 99 0.0034 24.6 4.2 60 1-66 244-317 (452)
14 3fg2_P Putative rubredoxin red 20.4 42 0.0014 26.4 1.8 36 32-67 265-311 (404)
15 2wp7_A PPPDE peptidase domain- 20.3 1.5E+02 0.0051 20.9 4.4 35 92-127 98-132 (168)
No 1
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.90 E-value=8.2e-24 Score=177.36 Aligned_cols=156 Identities=23% Similarity=0.346 Sum_probs=133.3
Q ss_pred CcccccCCCCCCCCceecCC-ccccccccccccCCCCeeEeecccccchhhHHHHHHHHHHHHHcCCCCCCCHHHHhHhH
Q psy14913 1 GYTYRYPFLHESCGINVVNK-NVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFLQLMKGYVTLPSKAEMLADT 79 (166)
Q Consensus 1 GY~~~fPFL~~~~~l~~~~~-~v~~Ly~~if~~~~PsLaFiG~~~~~~~~~~~ElQA~~~a~~~~G~~~LPs~~em~~~~ 79 (166)
||+.++|||+++..+..+++ .+.++|++++++++|+|+|||.+.....++++|.||+|+|++++|+.+|||.++|++++
T Consensus 273 G~~p~~~~l~~~~gl~~~~~~~v~~~~~~~~~t~~p~i~aiGd~~~~~~~~~a~~qa~~~a~~l~G~~~lP~~~~m~~~~ 352 (464)
T 2xve_A 273 GYIHHFPFLNDDLRLVTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQAWYARDVIMGRLPLPSKEEMKADS 352 (464)
T ss_dssp CBCCCCTTBCTTTCCCCCSSSCCSSEETTTEESSSTTEEECSCSCCSSCHHHHHHHHHHHHHHHTTSSCCCCHHHHHHHH
T ss_pred CCCCCCCCcCcccccccCCCcccccccceEecCCCCCEEEEeCcccccchHHHHHHHHHHHHHHcCCCCCcCHHHHHHHH
Confidence 89999999987555555554 56689999999999999999998876789999999999999999999999999999999
Q ss_pred HHHHHHHhhcC--CCCcceecccchHHHHHHHHHHhcCCCCC-hHHHHHHHHhHHHHHhhhcCCCCCCceEecCCCcccc
Q psy14913 80 DQDIRAHRKES--QSTHTHVMHLRSEKYLNSLASMMRGESPV-PPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVR 156 (166)
Q Consensus 80 ~~~~~~~~~~~--~~r~~h~~~~~~~~Y~~~L~~~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~yrl~~~~~~~~ 156 (166)
+++.+. .... ..+++|. +.+|+|+|++++ |+.++ ++++++++..+...+..++..||+.+||++.++++..
T Consensus 353 ~~~~~~-~~~~~~~~~~~~~----~~~Y~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 426 (464)
T 2xve_A 353 MAWREK-ELTLVTAEEMYTY----QGDYIQNLIDMT-DYPSFDIPATNKTFLEWKHHKKENIMTFRDHSYRSLMTGTMAP 426 (464)
T ss_dssp HHHHHH-HHTCCSHHHHHHH----HHHHHHHHHTTS-SSCCCCHHHHHHHHHHHHHHHHHCTTTGGGCCCBCTTTCCBCC
T ss_pred HHHHHH-hhccCCCCCcccc----HHHHHHHHHHHc-CCCCCChHHHHHHHHHHHHHHHhchhhhcccceeEecCceeec
Confidence 887663 2221 2455554 578999999999 99987 6789999999999999999999999999999999988
Q ss_pred cccccc
Q psy14913 157 EPGAAK 162 (166)
Q Consensus 157 ~~~~~~ 162 (166)
.+..-|
T Consensus 427 ~~~~~~ 432 (464)
T 2xve_A 427 KHHTPW 432 (464)
T ss_dssp CCSSCG
T ss_pred cCCCHH
Confidence 876655
No 2
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.74 E-value=1e-17 Score=139.25 Aligned_cols=114 Identities=25% Similarity=0.436 Sum_probs=94.2
Q ss_pred CcccccCC-----CCCC-CCceecCCccccccccccccCCCCeeEeecccccchhhHHHHHHHHHHHHHcCCCCCCCHHH
Q psy14913 1 GYTYRYPF-----LHES-CGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFLQLMKGYVTLPSKAE 74 (166)
Q Consensus 1 GY~~~fPF-----L~~~-~~l~~~~~~v~~Ly~~if~~~~PsLaFiG~~~~~~~~~~~ElQA~~~a~~~~G~~~LPs~~e 74 (166)
||+.++|| |+.. ..+..++..+.+||+++|++.+|+|+|+|.+.....++++|.||+|+|++++|+.+|||.++
T Consensus 289 G~~~~~~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~~~~~a~~qa~~~a~~~~g~~~lp~~~~ 368 (447)
T 2gv8_A 289 GYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVVPFPTSQAQAAFLARVWSGRLKLPSKEE 368 (447)
T ss_dssp CBCCCCCCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBSSCHHHHHHHHHHHHHHHHTTSSCCCCHHH
T ss_pred CCCcCCCCCcccccccccCceecCCCcccccccccccCCCCcEEEEeccccccCchHHHHHHHHHHHHHcCCCCCcCHHH
Confidence 89999999 8752 23445665656899999999999999999998877899999999999999999999999999
Q ss_pred HhHhHHHHHHHHhhcCCCCcceecc-cchHHHHHHHHHHhcCCC
Q psy14913 75 MLADTDQDIRAHRKESQSTHTHVMH-LRSEKYLNSLASMMRGES 117 (166)
Q Consensus 75 m~~~~~~~~~~~~~~~~~r~~h~~~-~~~~~Y~~~L~~~~~g~~ 117 (166)
|+++++++.+.+ .+..+.+|.+. +++.+|+++|++.+ |..
T Consensus 369 m~~~~~~~~~~~--~~~~~~~~~~~~~~~~~y~~~l~~~~-~~~ 409 (447)
T 2gv8_A 369 QLKWQDELMFSL--SGANNMYHSLDYPKDATYINKLHDWC-KQA 409 (447)
T ss_dssp HHHHHHHHHHHH--TTCGGGTTBCTTTHHHHHHHHHHHHH-HTC
T ss_pred HHHHHHHHHHHh--cCCCcceeecCCccHHHHHHHHHHHh-Ccc
Confidence 999888765432 23344557665 67899999999998 663
No 3
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.41 E-value=0.00057 Score=54.14 Aligned_cols=56 Identities=21% Similarity=0.379 Sum_probs=41.7
Q ss_pred ccccccccCCCCeeEeeccccc--c---hhhHHHHHHHHHHHHHcCCCCCCCHHHHhHhHH
Q psy14913 25 LYKHLINIEHPSMCIIGIPGDT--V---VFYMFDLQVRFFLQLMKGYVTLPSKAEMLADTD 80 (166)
Q Consensus 25 Ly~~if~~~~PsLaFiG~~~~~--~---~~~~~ElQA~~~a~~~~G~~~LPs~~em~~~~~ 80 (166)
+..+.....+|+++.+|-+... . ....++.||+++|+.+.|+..+|+.++|++++.
T Consensus 291 v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~~~~p~~~~~~~~~~ 351 (369)
T 3d1c_A 291 LTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQ 351 (369)
T ss_dssp BCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred echhhcccCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhcccCCCCcchHHHHHH
Confidence 3444456678999999987543 1 123578999999999999999999876766444
No 4
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=92.81 E-value=0.11 Score=43.94 Aligned_cols=41 Identities=15% Similarity=0.210 Sum_probs=34.2
Q ss_pred cccccccccCCCCeeEe-eccccc-chhhHHHHHHHHHHHHHc
Q psy14913 24 PLYKHLINIEHPSMCII-GIPGDT-VVFYMFDLQVRFFLQLMK 64 (166)
Q Consensus 24 ~Ly~~if~~~~PsLaFi-G~~~~~-~~~~~~ElQA~~~a~~~~ 64 (166)
..|+.+.-+..||++++ |-..+. +...++|.|++|++++++
T Consensus 411 ~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~~i~ 453 (540)
T 3gwf_A 411 TSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEWISDTIG 453 (540)
T ss_dssp CCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHHHHHHHH
T ss_pred hhccccccCCCCceEEEecCCCCCccHHHHHHHHHHHHHHHHH
Confidence 58999999999999999 644333 467999999999999885
No 5
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=91.74 E-value=0.29 Score=41.39 Aligned_cols=41 Identities=20% Similarity=0.194 Sum_probs=34.1
Q ss_pred cccccccccCCCCeeEeeccccc----chhhHHHHHHHHHHHHHc
Q psy14913 24 PLYKHLINIEHPSMCIIGIPGDT----VVFYMFDLQVRFFLQLMK 64 (166)
Q Consensus 24 ~Ly~~if~~~~PsLaFiG~~~~~----~~~~~~ElQA~~~a~~~~ 64 (166)
.-|+.+.-+..||++++.=+.+. +...++|.|++|+++++.
T Consensus 418 ~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~i~ 462 (545)
T 3uox_A 418 STYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMIS 462 (545)
T ss_dssp CCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHHHH
T ss_pred ceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHHHH
Confidence 57999999999999998655532 356899999999999985
No 6
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=87.80 E-value=0.36 Score=40.81 Aligned_cols=41 Identities=17% Similarity=0.193 Sum_probs=33.7
Q ss_pred cccccccccCCCCeeEeeccc-cc---chhhHHHHHHHHHHHHHc
Q psy14913 24 PLYKHLINIEHPSMCIIGIPG-DT---VVFYMFDLQVRFFLQLMK 64 (166)
Q Consensus 24 ~Ly~~if~~~~PsLaFiG~~~-~~---~~~~~~ElQA~~~a~~~~ 64 (166)
..|+.+.-+..||++++.=+. +. +...++|.|++|+++++.
T Consensus 423 ~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i~~~i~ 467 (549)
T 4ap3_A 423 RTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIA 467 (549)
T ss_dssp CCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred hhccccccCCCCcEEEEeCCCCCCcCccHHHHHHHHHHHHHHHHH
Confidence 589999999999999984443 32 357999999999999885
No 7
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=87.22 E-value=0.85 Score=38.22 Aligned_cols=41 Identities=15% Similarity=0.259 Sum_probs=33.4
Q ss_pred cccccccccCCCCeeEe-eccccc---chhhHHHHHHHHHHHHHc
Q psy14913 24 PLYKHLINIEHPSMCII-GIPGDT---VVFYMFDLQVRFFLQLMK 64 (166)
Q Consensus 24 ~Ly~~if~~~~PsLaFi-G~~~~~---~~~~~~ElQA~~~a~~~~ 64 (166)
..|+.+-.+..||++++ |-..+. ...+.+|.|++|+++++.
T Consensus 418 ~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~ 462 (542)
T 1w4x_A 418 RTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIA 462 (542)
T ss_dssp CCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred heecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHH
Confidence 47888888999999998 866432 245899999999999985
No 8
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=61.18 E-value=14 Score=27.90 Aligned_cols=63 Identities=13% Similarity=0.146 Sum_probs=38.2
Q ss_pred CcccccCCCCCCCCceecCCcccccccc-ccccCCCCeeEeecc--cc--cchhhHHHHHHHHHHHHHcC
Q psy14913 1 GYTYRYPFLHESCGINVVNKNVQPLYKH-LINIEHPSMCIIGIP--GD--TVVFYMFDLQVRFFLQLMKG 65 (166)
Q Consensus 1 GY~~~fPFL~~~~~l~~~~~~v~~Ly~~-if~~~~PsLaFiG~~--~~--~~~~~~~ElQA~~~a~~~~G 65 (166)
||+.+.+||+..- +..+++.+ ..-.+ +.....|+++.+|-+ .. ......+..|++.+|.-+..
T Consensus 282 G~~p~~~~l~~~g-l~~~~G~i-~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~ 349 (357)
T 4a9w_A 282 GFRPALSHLKGLD-LVTPQGQV-EVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTA 349 (357)
T ss_dssp CBCCCCGGGTTTT-CBCTTSCB-CBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHH
T ss_pred CcCCCCcccCccc-ccCCCCCc-cccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHH
Confidence 7788888886532 33222333 23333 455778999999933 22 13456678888877765543
No 9
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=30.72 E-value=77 Score=25.69 Aligned_cols=63 Identities=10% Similarity=-0.109 Sum_probs=39.0
Q ss_pred CcccccCCCCCCCCceecC-CccccccccccccCCCCeeEeeccccc-----------chhhHHHHHHHHHHHHHcCCC
Q psy14913 1 GYTYRYPFLHESCGINVVN-KNVQPLYKHLINIEHPSMCIIGIPGDT-----------VVFYMFDLQVRFFLQLMKGYV 67 (166)
Q Consensus 1 GY~~~fPFL~~~~~l~~~~-~~v~~Ly~~if~~~~PsLaFiG~~~~~-----------~~~~~~ElQA~~~a~~~~G~~ 67 (166)
|++.+.++++..+.+..++ -.| +-+.+ ...|+++.+|=+... ...+.+..|++.+|.-+.|..
T Consensus 288 G~~p~~~ll~~~l~~~~~G~I~V-d~~~~---t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 362 (490)
T 2bc0_A 288 GFRPNTTLGNGKIDLFRNGAFLV-NKRQE---TSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTD 362 (490)
T ss_dssp CEEECCGGGTTCSCBCTTSCBCC-CTTCB---CSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcChHHHHhhhccCCCCCEEE-CCCcc---cCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCC
Confidence 5666667665432111112 122 22333 368999999976642 235789999999999998753
No 10
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=30.20 E-value=69 Score=25.20 Aligned_cols=36 Identities=8% Similarity=-0.125 Sum_probs=29.2
Q ss_pred cCCCCeeEeecccc-----cchhhHHHHHHHHHHHHHcCCC
Q psy14913 32 IEHPSMCIIGIPGD-----TVVFYMFDLQVRFFLQLMKGYV 67 (166)
Q Consensus 32 ~~~PsLaFiG~~~~-----~~~~~~~ElQA~~~a~~~~G~~ 67 (166)
..+|+++.+|=+.. ...+..+..|++.+|+-+.|..
T Consensus 255 t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~ 295 (385)
T 3klj_A 255 TSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGED 295 (385)
T ss_dssp CSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCCC
Confidence 36899999997764 2357889999999999998853
No 11
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=25.95 E-value=83 Score=23.49 Aligned_cols=43 Identities=9% Similarity=-0.082 Sum_probs=23.5
Q ss_pred cccCCCCeeEeeccccc--chhhHHHHHHHHHHH----HHcCCCCCCCH
Q psy14913 30 INIEHPSMCIIGIPGDT--VVFYMFDLQVRFFLQ----LMKGYVTLPSK 72 (166)
Q Consensus 30 f~~~~PsLaFiG~~~~~--~~~~~~ElQA~~~a~----~~~G~~~LPs~ 72 (166)
.....|+++.+|=+... .....+..|++.+|. .+.|+-++|.+
T Consensus 283 ~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~ 331 (333)
T 1vdc_A 283 TQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQEIGSQEGK 331 (333)
T ss_dssp CBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred cccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHHHHHHHhccccccC
Confidence 34568999999987654 234556666666554 44555555543
No 12
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=24.59 E-value=38 Score=26.62 Aligned_cols=40 Identities=13% Similarity=0.166 Sum_probs=29.4
Q ss_pred ccccccCCCCeeEeeccccc---chhhHHHHHHHHHHHHHcCC
Q psy14913 27 KHLINIEHPSMCIIGIPGDT---VVFYMFDLQVRFFLQLMKGY 66 (166)
Q Consensus 27 ~~if~~~~PsLaFiG~~~~~---~~~~~~ElQA~~~a~~~~G~ 66 (166)
.++-.+.+|+++.+|=+... .....++.|++.+|+-+.+.
T Consensus 292 ~~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~ 334 (409)
T 3h8l_A 292 LNMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANR 334 (409)
T ss_dssp TTSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 33344578999999977642 24578999999998877654
No 13
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=21.15 E-value=99 Score=24.61 Aligned_cols=60 Identities=13% Similarity=0.072 Sum_probs=38.3
Q ss_pred CcccccCCCCCCCCceec-CC--ccccccccccccCCCCeeEeeccccc-----------chhhHHHHHHHHHHHHHcCC
Q psy14913 1 GYTYRYPFLHESCGINVV-NK--NVQPLYKHLINIEHPSMCIIGIPGDT-----------VVFYMFDLQVRFFLQLMKGY 66 (166)
Q Consensus 1 GY~~~fPFL~~~~~l~~~-~~--~v~~Ly~~if~~~~PsLaFiG~~~~~-----------~~~~~~ElQA~~~a~~~~G~ 66 (166)
|++.+.++++.. +..+ +. .| +-|.+ ...|+++.+|=+... ...+.+..|++.+|.-+.|.
T Consensus 244 G~~p~~~ll~~~--l~~~~~G~i~V-d~~~~---t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 317 (452)
T 2cdu_A 244 GFRPNTELLKGK--VAMLDNGAIIT-DEYMH---SSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTED 317 (452)
T ss_dssp CEEECCGGGTTT--SCBCTTSCBCC-CTTSB---CSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSC
T ss_pred CCCCCHHHHHHh--hhcCCCCCEEE-CCCcC---cCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCC
Confidence 556666666543 2222 11 22 22333 367999999977642 23578999999999998875
No 14
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=20.35 E-value=42 Score=26.39 Aligned_cols=36 Identities=17% Similarity=0.041 Sum_probs=28.7
Q ss_pred cCCCCeeEeecccccc-----------hhhHHHHHHHHHHHHHcCCC
Q psy14913 32 IEHPSMCIIGIPGDTV-----------VFYMFDLQVRFFLQLMKGYV 67 (166)
Q Consensus 32 ~~~PsLaFiG~~~~~~-----------~~~~~ElQA~~~a~~~~G~~ 67 (166)
..+|+++.+|=+.... .++.+..|++.+|+-+.|..
T Consensus 265 t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 311 (404)
T 3fg2_P 265 TSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDA 311 (404)
T ss_dssp CSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCC
T ss_pred cCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCC
Confidence 3579999999776542 26889999999999999864
No 15
>2wp7_A PPPDE peptidase domain-containing protein 2; hydrolase, phosphoprotein, ubiquitin-like protein; 1.90A {Mus musculus} PDB: 3ebq_A
Probab=20.28 E-value=1.5e+02 Score=20.91 Aligned_cols=35 Identities=9% Similarity=0.258 Sum_probs=25.0
Q ss_pred CCcceecccchHHHHHHHHHHhcCCCCChHHHHHHH
Q psy14913 92 STHTHVMHLRSEKYLNSLASMMRGESPVPPVLLKIY 127 (166)
Q Consensus 92 ~r~~h~~~~~~~~Y~~~L~~~~~g~~p~~~~~~~~~ 127 (166)
....|.+.-.--.+++++++.+ .-.++|.|+..+-
T Consensus 98 g~~Y~Ll~~NCNhFs~~l~~~L-~gk~IP~wInrl~ 132 (168)
T 2wp7_A 98 GEAYNLFEHNCNTFSNEVAQFL-TGRKIPSYITDLP 132 (168)
T ss_dssp GGGCBTTTBSHHHHHHHHHHHH-HSCCCCHHHHTHH
T ss_pred cccCchhhhccchhHHHHHHHh-cCCCCcHHHHHHH
Confidence 3344545566778999999888 5577888877654
Done!