AmiGO: BLAST Results


BLAST match view associations BLAST with ube4b ube4b ube4b ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)	gene_product from Danio rerio	1.7e-237
BLAST match view associations BLAST with UBE4B UBE4B UBE4B Uncharacterized protein	protein from Canis lupus familiaris	1.3e-228
BLAST match view associations BLAST with UBE4B UBE4B UBE4B Uncharacterized protein	protein from Canis lupus familiaris	1.3e-228
BLAST match view associations BLAST with Gga.49012 Gga.49012 Gga.49012 Uncharacterized protein	protein from Gallus gallus	2.3e-227
BLAST match view associations BLAST with UBE4B UBE4B UBE4B Ubiquitin conjugation factor E4 B	protein from Homo sapiens	4.9e-227
BLAST match view associations BLAST with UBE4B UBE4B UBE4B UBE4B protein	protein from Bos taurus	6.2e-227
BLAST match view associations BLAST with UBE4B UBE4B UBE4B Uncharacterized protein	protein from Canis lupus familiaris	1.0e-226
BLAST match view associations BLAST with Ube4b Ube4b Ube4b ubiquitination factor E4B	gene from Rattus norvegicus	8.1e-225
BLAST match view associations BLAST with CG9934 CG9934 CG9934	protein from Drosophila melanogaster	2.9e-207
BLAST match view associations BLAST with F1RIG2 F1RIG2 F1RIG2 Uncharacterized protein	protein from Sus scrofa	2.8e-120
BLAST match view associations BLAST with ufd-2 ufd-2 ufd-2	gene from Caenorhabditis elegans	1.0e-100
BLAST match view associations BLAST with ufd-2 ufd-2 ufd-2 Protein UFD-2, isoform b	protein from Caenorhabditis elegans	1.0e-100
BLAST match view associations BLAST with AT5G15400 AT5G15400 AT5G15400	protein from Arabidopsis thaliana	6.0e-99
BLAST match view associations BLAST with nosA nosA nosA U box domain-containing protein	gene from Dictyostelium discoideum	4.5e-98
BLAST match view associations BLAST with UBE4B UBE4B UBE4B Uncharacterized protein	protein from Sus scrofa	1.5e-92
BLAST match view associations BLAST with UFD2 UFD2 UFD2 Ubiquitin chain assembly factor (E4)	gene from Saccharomyces cerevisiae	2.6e-86
BLAST match view associations BLAST with orf19.5965 orf19.5965 orf19.5965	gene_product from Candida albicans	6.5e-85
BLAST match view associations BLAST with UBE4A UBE4A UBE4A Ubiquitin conjugation factor E4 A	protein from Homo sapiens	1.4e-64
BLAST match view associations BLAST with UBE4A UBE4A UBE4A Ubiquitin conjugation factor E4 A	protein from Bos taurus	1.4e-64
BLAST match view associations BLAST with Ube4a Ube4a Ube4a ubiquitination factor E4A	gene from Rattus norvegicus	6.2e-62
BLAST match view associations BLAST with CG11070 CG11070 CG11070	protein from Drosophila melanogaster	8.8e-62
BLAST match view associations BLAST with UBE4A UBE4A UBE4A Uncharacterized protein	protein from Gallus gallus	1.3e-56
BLAST match view associations BLAST with UBE4A UBE4A UBE4A Ubiquitin conjugation factor E4 A	protein from Homo sapiens	3.1e-55
BLAST match view associations BLAST with UBE4A UBE4A UBE4A Uncharacterized protein	protein from Canis lupus familiaris	8.8e-54
BLAST match view associations BLAST with UBE4A UBE4A UBE4A Uncharacterized protein	protein from Sus scrofa	1.5e-53
BLAST match view associations BLAST with ube4a ube4a ube4a ubiquitination factor E4A (UFD2 homolog, yeast)	gene_product from Danio rerio	7.0e-53
BLAST match view associations BLAST with UBE4A UBE4A UBE4A Uncharacterized protein	protein from Gallus gallus	6.1e-48
BLAST match view associations BLAST with UBE4B UBE4B UBE4B Ubiquitin conjugation factor E4 B	protein from Homo sapiens	1.0e-39
BLAST match view associations BLAST with UBE4B UBE4B UBE4B Ubiquitin conjugation factor E4 B	protein from Homo sapiens	5.1e-26
BLAST match view associations BLAST with chn-1 chn-1 chn-1	gene from Caenorhabditis elegans	4.5e-06
BLAST match view associations BLAST with STUB1 STUB1 STUB1 STIP1 homology and U box-containing protein 1	protein from Gallus gallus	2.0e-05
BLAST match view associations BLAST with STUB1 STUB1 STUB1 Uncharacterized protein	protein from Canis lupus familiaris	3.8e-05
BLAST match view associations BLAST with STUB1 STUB1 STUB1 Uncharacterized protein	protein from Bos taurus	6.6e-05
BLAST match view associations BLAST with STUB1 STUB1 STUB1 Uncharacterized protein	protein from Bos taurus	7.5e-05
BLAST match view associations BLAST with DDB_G0282185 DDB_G0282185 DDB_G0282185 U box domain-containing protein	gene from Dictyostelium discoideum	8.9e-05
BLAST match view associations BLAST with STUB1 STUB1 STUB1 E3 ubiquitin-protein ligase CHIP	protein from Homo sapiens	0.00011
BLAST match view associations BLAST with LOC100511251 LOC100511251 LOC100511251 Uncharacterized protein	protein from Sus scrofa	0.00014
BLAST match view associations BLAST with Stub1 Stub1 Stub1 STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase	gene from Rattus norvegicus	0.00019
BLAST match view associations BLAST with STUB1 STUB1 STUB1 E3 ubiquitin-protein ligase CHIP	protein from Homo sapiens	0.00020
BLAST match view associations BLAST with MGG_08035 MGG_08035 MGG_08035 E3 ubiquitin-protein ligase CHIP	protein from Magnaporthe oryzae 70-15	0.00075
BLAST match view associations BLAST with PUB9 PUB9 PUB9 plant U-box 9	protein from Arabidopsis thaliana	0.00085
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy14915
        (1046 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

ZFIN|ZDB-GENE-020205-1 - symbol:ube4b "ubiquitination fac...  2175  1.7e-237  3
UNIPROTKB|F1P7I0 - symbol:UBE4B "Uncharacterized protein"...  2160  1.3e-228  2
UNIPROTKB|J9P2H4 - symbol:UBE4B "Uncharacterized protein"...  2160  1.3e-228  2
UNIPROTKB|F1NGY1 - symbol:UBE4B "Uncharacterized protein"...  2158  2.3e-227  2
UNIPROTKB|O95155 - symbol:UBE4B "Ubiquitin conjugation fa...  2150  4.9e-227  2
UNIPROTKB|A6QNS2 - symbol:UBE4B "UBE4B protein" species:9...  2149  6.2e-227  2
UNIPROTKB|J9P9M3 - symbol:UBE4B "Uncharacterized protein"...  2160  1.0e-226  2
RGD|1304738 - symbol:Ube4b "ubiquitination factor E4B" sp...  2154  8.1e-225  2
UNIPROTKB|F1M8D6 - symbol:Ube4b "Protein Ube4b" species:1...  2136  6.5e-223  2
FB|FBgn0032467 - symbol:CG9934 species:7227 "Drosophila m...  1976  2.9e-207  2
UNIPROTKB|F1RIG2 - symbol:F1RIG2 "Uncharacterized protein...  1115  2.8e-120  2
POMBASE|SPAC20H4.10 - symbol:ufd2 "ubiquitin-protein liga...  1031  5.1e-106  2
WB|WBGene00006734 - symbol:ufd-2 species:6239 "Caenorhabd...   999  1.0e-100  1
UNIPROTKB|Q95QB5 - symbol:ufd-2 "Protein UFD-2, isoform b...   999  1.0e-100  1
TAIR|locus:2180862 - symbol:AT5G15400 species:3702 "Arabi...   794  6.0e-99   2
DICTYBASE|DDB_G0292264 - symbol:nosA "U box domain-contai...   974  4.5e-98   1
ASPGD|ASPL0000072757 - symbol:AN10556 species:162425 "Eme...   941  1.4e-94   1
UNIPROTKB|I3LQG8 - symbol:LOC100737278 "Uncharacterized p...   922  1.5e-92   1
SGD|S000002349 - symbol:UFD2 "Ubiquitin chain assembly fa...   734  2.6e-86   2
CGD|CAL0003403 - symbol:orf19.5965 species:5476 "Candida ...   699  6.5e-85   3
UNIPROTKB|Q14139 - symbol:UBE4A "Ubiquitin conjugation fa...   683  1.4e-64   1
UNIPROTKB|A5PKG6 - symbol:UBE4A "Ubiquitin conjugation fa...   683  1.4e-64   1
UNIPROTKB|F1M9N5 - symbol:Ube4a "Ubiquitin conjugation fa...   671  8.8e-63   2
RGD|1303173 - symbol:Ube4a "ubiquitination factor E4A" sp...   664  6.2e-62   2
FB|FBgn0028467 - symbol:CG11070 species:7227 "Drosophila ...   570  8.8e-62   3
UNIPROTKB|F1NIK2 - symbol:CBL "Uncharacterized protein" s...   439  1.3e-56   2
UNIPROTKB|B7Z7P0 - symbol:UBE4A "cDNA FLJ51394, highly si...   578  3.1e-55   1
UNIPROTKB|E2RPU3 - symbol:UBE4A "Uncharacterized protein"...   587  8.8e-54   1
UNIPROTKB|F1SAK7 - symbol:UBE4A "Uncharacterized protein"...   585  1.5e-53   1
ZFIN|ZDB-GENE-070410-21 - symbol:ube4a "ubiquitination fa...   579  7.0e-53   1
UNIPROTKB|F1M8W6 - symbol:Ube4a "Ubiquitin conjugation fa...   429  2.6e-52   3
UNIPROTKB|E1C6M5 - symbol:CBL "Uncharacterized protein" s...   534  6.1e-48   1
UNIPROTKB|K7EP75 - symbol:UBE4B "Ubiquitin conjugation fa...   434  1.0e-39   1
UNIPROTKB|K7ERA7 - symbol:UBE4B "Ubiquitin conjugation fa...   306  5.1e-26   1
WB|WBGene00000500 - symbol:chn-1 species:6239 "Caenorhabd...   137  4.5e-06   1
UNIPROTKB|Q5ZHY5 - symbol:STUB1 "STIP1 homology and U box...   133  2.0e-05   1
ASPGD|ASPL0000001660 - symbol:AN5906 species:162425 "Emer...   132  2.2e-05   1
UNIPROTKB|J9NRV4 - symbol:STUB1 "Uncharacterized protein"...   127  3.8e-05   1
UNIPROTKB|F1MUH4 - symbol:STUB1 "Uncharacterized protein"...   128  6.6e-05   1
UNIPROTKB|E1B7G3 - symbol:STUB1 "Uncharacterized protein"...   128  7.5e-05   1
DICTYBASE|DDB_G0282185 - symbol:DDB_G0282185 "U box domai...   151  8.9e-05   3
UNIPROTKB|Q9UNE7 - symbol:STUB1 "E3 ubiquitin-protein lig...   126  0.00011   1
UNIPROTKB|F1RG35 - symbol:STUB1 "Uncharacterized protein"...   125  0.00014   1
RGD|1306167 - symbol:Stub1 "STIP1 homology and U-box cont...   124  0.00019   1
UNIPROTKB|F1P105 - symbol:STUB1 "STIP1 homology and U box...   122  0.00019   1
UNIPROTKB|H3BTA3 - symbol:STUB1 "E3 ubiquitin-protein lig...   111  0.00020   1
UNIPROTKB|G4MXP4 - symbol:MGG_08035 "E3 ubiquitin-protein...   118  0.00075   1
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:...   121  0.00085   1


>ZFIN|ZDB-GENE-020205-1 [details] [associations]
            symbol:ube4b "ubiquitination factor E4B, UFD2 homolog
            (S. cerevisiae)" species:7955 "Danio rerio" [GO:0016567 "protein
            ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
            complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
            ligase activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
            ligase activity" evidence=IEA] InterPro:IPR003613
            InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
            ZFIN:ZDB-GENE-020205-1 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
            GeneTree:ENSGT00390000009300 EMBL:BX571850 IPI:IPI00996876
            Ensembl:ENSDART00000126384 ArrayExpress:E7FEA3 Bgee:E7FEA3
            Uniprot:E7FEA3
        Length = 1362

 Score = 2175 (770.7 bits), Expect = 1.7e-237, Sum P(3) = 1.7e-237
 Identities = 439/885 (49%), Positives = 606/885 (68%)

Query:   171 SKNNTCVLGHYTASYARVFEEERNNPKKCSIFPFKDVLYEVRTQLVRHSILVLQSTNSDP 230
             S   T +L +    +  V  EER  PK CS      +L  +R+Q + H+ LVLQ   + P
Sbjct:   479 SCKETEMLNYLIERFDSVGMEERKAPKMCSQPAVSQLLSNIRSQCISHAALVLQGALTQP 538

Query:   231 MS----SPLVKPLINQTLPNGFLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADP 286
              +    S LV  ++ + LP GF+ + V   +++E+ FKQ+  PILQG+  A+ E S    
Sbjct:   539 RAPLQPSLLVPYMLCRNLPYGFIQELVRMTHQEEDVFKQIFVPILQGLALAVKECSFDSD 598

Query:   287 DYSKPLEALTDLLEIRIGSNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSIS 346
             ++  PL AL +L EI+ G    PVC+ + S   + P+  +   GREI   S+LG FFS+S
Sbjct:   599 NFKFPLMALAELCEIKFGKT-HPVCNLITSLPLWCPDPLSPGTGREIQRLSFLGAFFSLS 657

Query:   347 VFAEDDVKVGNHFFS--SVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNPTRETML 404
             VFAEDD KVG+ +FS  ++T  N + +  +LQ+ L+  RG L++I H +L N  TRE  L
Sbjct:   658 VFAEDDTKVGDKYFSGPAITMENTRVVSQSLQHYLESARGDLFKILHNILLNGETREAAL 717

Query:   405 GYLAALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSE 464
              Y+AALV  N K+AQ+Q+++  ++ DGFM+N L V Q LS KI L  VD +Y FHP K  
Sbjct:   718 SYMAALVNRNVKKAQMQTDDKLVSTDGFMMNFLWVLQQLSMKIKLETVDPLYIFHP-KCR 776

Query:   465 MLSFKNDTRLKMSSQEVEDWLASLSS--TAWREPKFSSTCWFLTLHCTHLSLLPALAKYQ 522
             +     +TRLK + +E++ WL  L    T + EPKF + C+FLTLH  HLS+LP   +Y 
Sbjct:   777 LNVSPEETRLKATMEELKSWLTELHEDPTKFSEPKFPTECFFLTLHAHHLSILPCCRRYI 836

Query:   523 RRVRSLRDLQ-KLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLD 581
             RR+R++RDL  + V+EL ++E  W+ + +A R+++ LKR K Q+KKL RSKACADAGLLD
Sbjct:   837 RRLRAIRDLNSRTVEELKNSENQWKDSPLAGRHREMLKRCKTQLKKLVRSKACADAGLLD 896

Query:   582 KNLMKKSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVRPEFAALPEWYVEDIAEFLLF 641
             +NL+++   F+  V + +LR++  E    +++LPL   +   FAALPE+Y+ED+AEF+LF
Sbjct:   897 ENLLRRCLQFFSMVIQLILRMV--EPAFPHVSLPLNPEIPKSFAALPEFYIEDVAEFMLF 954

Query:   642 ALQYIPGI--EDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLY 699
              +QY P +  E   ED  VT+L+V +CS   IKNPYL+AKL+EVLF++NP VQ RT   +
Sbjct:   955 IVQYFPQVLYEPCTED-IVTFLIVFICSQNYIKNPYLIAKLVEVLFVTNPAVQPRTQRFF 1013

Query:   700 DRIMAHKFS-SQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQA 758
             + +  H  S +Q +P+ LMKFYTDVE TG++SEFYDKFTIRYHIS I K +W++  H+  
Sbjct:  1014 EMLENHPLSVNQLVPA-LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNINHQGT 1072

Query:   759 FINESKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSR 818
             F+ E  +G QFV+++NML+NDTTFLLDESLESLKRIHE QE M+++  +  +P EQQ SR
Sbjct:  1073 FLEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEIQEEMKNKEQWDLLPREQQQSR 1132

Query:   819 ERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPK 878
             + QL  DER  RSYL L  ETVDMFH LT ++++PFLRPEL  RL+AMLN+NLQQLCGPK
Sbjct:  1133 QSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPK 1192

Query:   879 CNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDDAADRMER 938
             C  LKV +P+KYG++P++LL+QL DIYL LDC  FA AIA D+RS+ +ELF++   +M +
Sbjct:  1193 CRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCPRFAKAIADDQRSYSRELFEEVISKMRK 1252

Query:   939 RQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSGVV 998
               I    +++KF+ L  +  EI   N + E+DY+DAPDEF+DPLMDTLM DPV LPSG +
Sbjct:  1253 AGIKSTIAIEKFKLLLEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVQLPSGNI 1312

Query:   999 MDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
             MDRS+I+RHLLNS TDPF+RQPL E  L+P  ELK++I+AW REK
Sbjct:  1313 MDRSIILRHLLNSPTDPFNRQPLTESMLEPVPELKERIQAWMREK 1357

 Score = 95 (38.5 bits), Expect = 1.7e-237, Sum P(3) = 1.7e-237
 Identities = 39/151 (25%), Positives = 70/151 (46%)

Query:    33 QDMIGSSILFNSPSGR-DDMIGSIGQKVNLGTSPMEIDKSVIKISEKPQAHGEPMEVEIE 91
             Q   G S L +SPS   +    S+ +  ++       +KS+ ++        E MEVE  
Sbjct:    88 QSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDTASCEKSMSQVDVDSGI--ENMEVEDS 145

Query:    92 PVREIKIVKAPSMEITPQIIENT----ICKILSVTYSQVDASNTILYLPQVASVLTELKQ 147
               RE + +        P + E      ICKIL V++ + D    +++LP +A+   E ++
Sbjct:   146 DRREKRNLAEKDSSSNPDVSEELALQLICKILRVSWKEQDRD--VIFLPSLAA---EFQK 200

Query:   148 N--SVTITYQDLISQSLVELQDILLSKNNTC 176
             N   V   ++DLI Q L+E   ++ +++  C
Sbjct:   201 NPKDVYSDFKDLIGQILMEAL-MMSTRSRDC 230

 Score = 60 (26.2 bits), Expect = 1.7e-237, Sum P(3) = 1.7e-237
 Identities = 11/17 (64%), Positives = 16/17 (94%)

Query:     1 MSELTPDEIRQRRLAKL 17
             M +L+P+EIR+RRLA+L
Sbjct:     1 MEQLSPEEIRRRRLARL 17


>UNIPROTKB|F1P7I0 [details] [associations]
            symbol:UBE4B "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
            evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
            Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
            GeneTree:ENSGT00390000009300 EMBL:AAEX03003938
            Ensembl:ENSCAFT00000031485 Uniprot:F1P7I0
        Length = 1312

 Score = 2160 (765.4 bits), Expect = 1.3e-228, Sum P(2) = 1.3e-228
 Identities = 442/881 (50%), Positives = 602/881 (68%)

Query:   175 TCVLGHYTASYARVFEEERNNPKKCSIFPFKDVLYEVRTQLVRHSILVLQSTNSDP--MS 232
             T +L +    + RV  EE+  PK CS      +L  +R+Q + H+ LVLQ + + P  M 
Sbjct:   434 TDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSMQ 493

Query:   233 SP--LVKPLINQTLPNGFLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADPDYSK 290
              P  LV  ++ + LP GF+ + V T ++DEE FKQ+  PILQG+  A  E S+ D DY K
Sbjct:   494 QPSFLVPYMLCRNLPYGFMQELVRTTHQDEEVFKQIFIPILQGLALAAKECSL-DSDYFK 552

Query:   291 -PLEALTDLLEIRIGSNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFA 349
              PL AL +L E + G    PVC+ + S   + P+  +   GRE+   SYLG FFS SVFA
Sbjct:   553 YPLMALGELCETKFGKT-HPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFA 611

Query:   350 EDDVKVGNHFFS--SVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNPTRETMLGYL 407
             EDD KV   +FS  ++T  N + +  +LQ+ L+L R  L++I H++L N  TRE  LGY+
Sbjct:   612 EDDAKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALGYM 671

Query:   408 AALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLS 467
             AA+V  N K+AQ+Q+++  ++ DGFMLN L V Q LS KI L  VD  Y FHP     ++
Sbjct:   672 AAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCR--IT 729

Query:   468 FKND-TRLKMSSQEVEDWLASL--SSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRR 524
               ND TR+  + ++V DWLA L      + EPKF + C+FLTLH  HLS+LP+  +Y RR
Sbjct:   730 LPNDETRVNATMEDVNDWLAELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRR 789

Query:   525 VRSLRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNL 584
             +R++R+L + V++L + E  W+ + +A R+++ LKR K Q+KKL R KACADAGLLD++ 
Sbjct:   790 LRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESF 849

Query:   585 MKKSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQ 644
             +++   FY  + + LLR++  +    +ITLPL S V   FAALPE+YVED+AEFL F +Q
Sbjct:   850 LRRCLNFYGLLIQLLLRIL--DPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQ 907

Query:   645 YIPGI--EDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRI 702
             Y P +  E   +D  V +L+V +C+   I+NPYL+AKL+EV+F++NP VQ RT   ++ I
Sbjct:   908 YSPQVLYEPCTQD-IVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMI 966

Query:   703 MAHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFINE 762
               H  S++ L   LMKFYTDVE TG++SEFYDKFTIRYHIS I K +W++  H   F+ E
Sbjct:   967 ENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEE 1026

Query:   763 SKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQL 822
               +G QFV+++NML+NDTTFLLDESLESLKRIHE QE M+++  +  +P +QQ +R+ QL
Sbjct:  1027 FNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQL 1086

Query:   823 AADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHL 882
             A DER  RSYL L  ETVDMFH LT ++++PFLRPEL  RL+AMLNFNLQQLCGPKC  L
Sbjct:  1087 AQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDL 1146

Query:   883 KVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDDAADRMERRQIL 942
             KV +P+KYG++P++LL+QL DIYL LDC  FA AIA D+RS+ KELF++   +M +  I 
Sbjct:  1147 KVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIK 1206

Query:   943 LPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSGVVMDRS 1002
                +++KF+ LA +  EI   N + E+DY+DAPDEFRDPLMDTLM DPV LPSG +MDRS
Sbjct:  1207 STIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRS 1266

Query:  1003 VIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
             +I+RHLLNS TDPF+RQ L E+ L+P  ELK++I AW REK
Sbjct:  1267 IILRHLLNSPTDPFNRQMLTENMLEPVPELKEQIHAWMREK 1307

 Score = 69 (29.3 bits), Expect = 1.3e-228, Sum P(2) = 1.3e-228
 Identities = 21/68 (30%), Positives = 32/68 (47%)

Query:     1 MSELTPDEIRQRRLAKL--GXXXXXXXXXXXXXXQDMIGSSILFNSPSGRDDMIGSIGQK 58
             M EL+ DEIR+RRLA+L  G              ++ +G  I  ++P G    +G     
Sbjct:     1 MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPLGPPIAASAP-GPSQSLGLNVHN 59

Query:    59 VNLGTSPM 66
             +   TSP+
Sbjct:    60 MTPATSPI 67


>UNIPROTKB|J9P2H4 [details] [associations]
            symbol:UBE4B "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
            evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
            Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
            GeneTree:ENSGT00390000009300 CTD:10277 KO:K10597 EMBL:AAEX03003938
            RefSeq:XP_849824.2 Ensembl:ENSCAFT00000046848 GeneID:479603
            KEGG:cfa:479603 Uniprot:J9P2H4
        Length = 1173

 Score = 2160 (765.4 bits), Expect = 1.3e-228, Sum P(2) = 1.3e-228
 Identities = 442/881 (50%), Positives = 602/881 (68%)

Query:   175 TCVLGHYTASYARVFEEERNNPKKCSIFPFKDVLYEVRTQLVRHSILVLQSTNSDP--MS 232
             T +L +    + RV  EE+  PK CS      +L  +R+Q + H+ LVLQ + + P  M 
Sbjct:   295 TDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSMQ 354

Query:   233 SP--LVKPLINQTLPNGFLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADPDYSK 290
              P  LV  ++ + LP GF+ + V T ++DEE FKQ+  PILQG+  A  E S+ D DY K
Sbjct:   355 QPSFLVPYMLCRNLPYGFMQELVRTTHQDEEVFKQIFIPILQGLALAAKECSL-DSDYFK 413

Query:   291 -PLEALTDLLEIRIGSNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFA 349
              PL AL +L E + G    PVC+ + S   + P+  +   GRE+   SYLG FFS SVFA
Sbjct:   414 YPLMALGELCETKFGKT-HPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFA 472

Query:   350 EDDVKVGNHFFS--SVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNPTRETMLGYL 407
             EDD KV   +FS  ++T  N + +  +LQ+ L+L R  L++I H++L N  TRE  LGY+
Sbjct:   473 EDDAKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALGYM 532

Query:   408 AALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLS 467
             AA+V  N K+AQ+Q+++  ++ DGFMLN L V Q LS KI L  VD  Y FHP     ++
Sbjct:   533 AAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCR--IT 590

Query:   468 FKND-TRLKMSSQEVEDWLASL--SSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRR 524
               ND TR+  + ++V DWLA L      + EPKF + C+FLTLH  HLS+LP+  +Y RR
Sbjct:   591 LPNDETRVNATMEDVNDWLAELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRR 650

Query:   525 VRSLRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNL 584
             +R++R+L + V++L + E  W+ + +A R+++ LKR K Q+KKL R KACADAGLLD++ 
Sbjct:   651 LRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESF 710

Query:   585 MKKSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQ 644
             +++   FY  + + LLR++  +    +ITLPL S V   FAALPE+YVED+AEFL F +Q
Sbjct:   711 LRRCLNFYGLLIQLLLRIL--DPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQ 768

Query:   645 YIPGI--EDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRI 702
             Y P +  E   +D  V +L+V +C+   I+NPYL+AKL+EV+F++NP VQ RT   ++ I
Sbjct:   769 YSPQVLYEPCTQD-IVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMI 827

Query:   703 MAHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFINE 762
               H  S++ L   LMKFYTDVE TG++SEFYDKFTIRYHIS I K +W++  H   F+ E
Sbjct:   828 ENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEE 887

Query:   763 SKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQL 822
               +G QFV+++NML+NDTTFLLDESLESLKRIHE QE M+++  +  +P +QQ +R+ QL
Sbjct:   888 FNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQL 947

Query:   823 AADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHL 882
             A DER  RSYL L  ETVDMFH LT ++++PFLRPEL  RL+AMLNFNLQQLCGPKC  L
Sbjct:   948 AQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDL 1007

Query:   883 KVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDDAADRMERRQIL 942
             KV +P+KYG++P++LL+QL DIYL LDC  FA AIA D+RS+ KELF++   +M +  I 
Sbjct:  1008 KVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIK 1067

Query:   943 LPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSGVVMDRS 1002
                +++KF+ LA +  EI   N + E+DY+DAPDEFRDPLMDTLM DPV LPSG +MDRS
Sbjct:  1068 STIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRS 1127

Query:  1003 VIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
             +I+RHLLNS TDPF+RQ L E+ L+P  ELK++I AW REK
Sbjct:  1128 IILRHLLNSPTDPFNRQMLTENMLEPVPELKEQIHAWMREK 1168

 Score = 69 (29.3 bits), Expect = 1.3e-228, Sum P(2) = 1.3e-228
 Identities = 21/68 (30%), Positives = 32/68 (47%)

Query:     1 MSELTPDEIRQRRLAKL--GXXXXXXXXXXXXXXQDMIGSSILFNSPSGRDDMIGSIGQK 58
             M EL+ DEIR+RRLA+L  G              ++ +G  I  ++P G    +G     
Sbjct:     1 MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPLGPPIAASAP-GPSQSLGLNVHN 59

Query:    59 VNLGTSPM 66
             +   TSP+
Sbjct:    60 MTPATSPI 67


>UNIPROTKB|F1NGY1 [details] [associations]
            symbol:UBE4B "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0000209 "protein polyubiquitination"
            evidence=IEA] [GO:0003222 "ventricular trabecula myocardium
            morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006915 "apoptotic
            process" evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
            [GO:0019899 "enzyme binding" evidence=IEA] [GO:0031175 "neuron
            projection development" evidence=IEA] [GO:0034450
            "ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0034976
            "response to endoplasmic reticulum stress" evidence=IEA]
            InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
            SMART:SM00504 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
            GO:GO:0009411 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0000209 GO:GO:0000151 GO:GO:0034976 GO:GO:0034450
            GeneTree:ENSGT00390000009300 OMA:TCKETEM EMBL:AADN02040784
            IPI:IPI00594565 Ensembl:ENSGALT00000004175 Uniprot:F1NGY1
        Length = 1182

 Score = 2158 (764.7 bits), Expect = 2.3e-227, Sum P(2) = 2.3e-227
 Identities = 439/880 (49%), Positives = 603/880 (68%)

Query:   175 TCVLGHYTASYARVFEEERNNPKKCSIFPFKDVLYEVRTQLVRHSILVLQSTNSDPMS-- 232
             T +L +    + RV  EER  PK CS      +L  +R+Q + H+ LVLQ + + P S  
Sbjct:   303 TEMLNYLIECFDRVGIEERKAPKMCSQPTVSQLLSNIRSQCISHAALVLQGSLTQPRSLQ 362

Query:   233 --SPLVKPLINQTLPNGFLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADPDYSK 290
               S LV  ++ + LP GF+ + V T Y+DEE FKQ+  PILQG+  A  E S+   ++  
Sbjct:   363 QQSLLVPYMLCRNLPFGFIQELVRTTYQDEEVFKQIFIPILQGLAVASKECSLDSDNFKY 422

Query:   291 PLEALTDLLEIRIGSNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFAE 350
             PL AL +L EI+ G    P+CS +VS   + P+  +   GRE+   SYLG FFS+SVFAE
Sbjct:   423 PLMALCELCEIKFGKT-HPMCSLVVSLPLWLPKSLSTGAGRELQRLSYLGAFFSLSVFAE 481

Query:   351 DDVKVGNHFFS--SVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNPTRETMLGYLA 408
             DD KV   +FS  ++T  N + +  +LQ+ L+L R  L++I H++L N  TRE  L Y+A
Sbjct:   482 DDNKVVEKYFSGPAITLENTRVVSQSLQHYLELARQELFKILHSILLNGETREAALSYMA 541

Query:   409 ALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLSF 468
             A+V  N K+AQ+Q+++  ++ DGFMLN L V Q LS KI L  VD MY FHP     L  
Sbjct:   542 AVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSMKIKLETVDPMYIFHPRCRIDLP- 600

Query:   469 KNDTRLKMSSQEVEDWLASL--SSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRRVR 526
              ++TR+K + ++V  W+A L    + + +PKF + C+FLTLH  HLS+LP+  +Y RR+R
Sbjct:   601 TDETRVKATMEDVTAWIAELYRDPSPFSDPKFPTECFFLTLHAHHLSILPSCRRYIRRLR 660

Query:   527 SLRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNLMK 586
             ++R+L + V++L + E  W+ + +A R+++ LKR K Q+KKL R KACADAGLLD+N ++
Sbjct:   661 AIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLR 720

Query:   587 KSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQYI 646
             +   FY  V + +LR++  +    NI LPL   V   FAALPE+YVED+AEFL F +QY 
Sbjct:   721 RCLNFYGMVIQLMLRIL--DPAYPNIKLPLTLEVPKVFAALPEFYVEDVAEFLFFIVQYA 778

Query:   647 PGI--EDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRIMA 704
             P +  E   +D  V +L+V +C+   I+NPYL+AKL+EV+F++NP VQ RT   ++ I  
Sbjct:   779 PQVLYEPCTQD-IVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIEN 837

Query:   705 HKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFINESK 764
             H  S++ L   LMKFYTDVE TG++SEFYDKFTIRYHIS I K +W++  H   F+ E  
Sbjct:   838 HPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFN 897

Query:   765 TGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQLAA 824
             +G QFV+++NML+NDTTFLLDESLESLKRIHE QE M+++  +  +P +QQ +R+ QLA 
Sbjct:   898 SGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQ 957

Query:   825 DERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHLKV 884
             DER  RSYL L  ETVDMFH LT ++++PFLRPEL  RL+AMLNFNLQQLCGPKC  LKV
Sbjct:   958 DERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKV 1017

Query:   885 SSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDDAADRMERRQILLP 944
              +P+KYG++P++LL+QL DIYL LDC  FA AIA D+RS+ KELF++   +M +  I   
Sbjct:  1018 ENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKST 1077

Query:   945 SSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSGVVMDRSVI 1004
              +++KF+ LA +  EI   N + E+DY+DAPDEFRDPLMDTLM DPV LPSG +MDRS+I
Sbjct:  1078 IAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSII 1137

Query:  1005 VRHLLNSSTDPFSRQPLFEDNLKPN-EELKKKIEAWKREK 1043
             +RHLLNSSTDPF+RQ L E+ L+P   ELK++I+AW R+K
Sbjct:  1138 LRHLLNSSTDPFNRQTLTENMLEPVVPELKEQIQAWMRDK 1177

 Score = 59 (25.8 bits), Expect = 2.3e-227, Sum P(2) = 2.3e-227
 Identities = 12/17 (70%), Positives = 15/17 (88%)

Query:     1 MSELTPDEIRQRRLAKL 17
             M EL+ DEIR+RRLA+L
Sbjct:     9 MEELSADEIRRRRLARL 25


>UNIPROTKB|O95155 [details] [associations]
            symbol:UBE4B "Ubiquitin conjugation factor E4 B"
            species:9606 "Homo sapiens" [GO:0031175 "neuron projection
            development" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
            activity" evidence=IEA] [GO:0034976 "response to endoplasmic
            reticulum stress" evidence=IEA] [GO:0000209 "protein
            polyubiquitination" evidence=IEA] [GO:0003222 "ventricular
            trabecula myocardium morphogenesis" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
            evidence=TAS] [GO:0006915 "apoptotic process" evidence=IDA]
            [GO:0009411 "response to UV" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
            [GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
            protein catabolic process" evidence=TAS] InterPro:IPR003613
            InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
            EMBL:AF043117 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
            GO:GO:0009411 GO:GO:0019899 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0031175 GO:GO:0000209 GO:GO:0000151 GO:GO:0042787
            GO:GO:0034976 GO:GO:0034450 eggNOG:COG5113 GO:GO:0003222
            EMBL:AL590639 PDB:3L1Z PDBsum:3L1Z EMBL:AB028839 EMBL:AF331520
            EMBL:AB014584 EMBL:AL096841 EMBL:BC093696 EMBL:AF091093
            IPI:IPI00005715 IPI:IPI00555735 IPI:IPI00655534 PIR:T00358
            RefSeq:NP_001099032.1 RefSeq:NP_006039.2 UniGene:Hs.593974 PDB:2KRE
            PDB:3L1X PDBsum:2KRE PDBsum:3L1X ProteinModelPortal:O95155
            SMR:O95155 DIP:DIP-40309N IntAct:O95155 MINT:MINT-2798575
            STRING:O95155 PhosphoSite:O95155 PaxDb:O95155 PRIDE:O95155
            Ensembl:ENST00000253251 Ensembl:ENST00000343090
            Ensembl:ENST00000377157 GeneID:10277 KEGG:hsa:10277 UCSC:uc001aqr.4
            UCSC:uc001aqs.4 CTD:10277 GeneCards:GC01P010092 HGNC:HGNC:12500
            HPA:HPA019219 MIM:613565 neXtProt:NX_O95155 PharmGKB:PA37148
            HOGENOM:HOG000294109 HOVERGEN:HBG058129 InParanoid:O95155 KO:K10597
            OMA:TCKETEM ChiTaRS:UBE4B EvolutionaryTrace:O95155 GenomeRNAi:10277
            NextBio:38932 PMAP-CutDB:O95155 ArrayExpress:O95155 Bgee:O95155
            CleanEx:HS_UBE4B Genevestigator:O95155 GermOnline:ENSG00000130939
            Uniprot:O95155
        Length = 1302

 Score = 2150 (761.9 bits), Expect = 4.9e-227, Sum P(2) = 4.9e-227
 Identities = 441/881 (50%), Positives = 600/881 (68%)

Query:   175 TCVLGHYTASYARVFEEERNNPKKCSIFPFKDVLYEVRTQLVRHSILVLQSTNSDPMS-- 232
             T +L +    + RV  EE+  PK CS      +L  +R+Q + H+ LVLQ + + P S  
Sbjct:   424 TDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQ 483

Query:   233 --SPLVKPLINQTLPNGFLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADPDYSK 290
               S LV  ++ + LP GF+ + V T ++DEE FKQ+  PILQG+  A  E S+ D DY K
Sbjct:   484 QPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSL-DSDYFK 542

Query:   291 -PLEALTDLLEIRIGSNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFA 349
              PL AL +L E + G    PVC+ + S   + P+  +   GRE+   SYLG FFS SVFA
Sbjct:   543 YPLMALGELCETKFGKT-HPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAFFSFSVFA 601

Query:   350 EDDVKVGNHFFS--SVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNPTRETMLGYL 407
             EDDVKV   +FS  ++T  N + +  +LQ+ L+L R  L++I H++L N  TRE  L Y+
Sbjct:   602 EDDVKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYM 661

Query:   408 AALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLS 467
             AA+V  N K+AQ+Q+++  ++ DGFMLN L V Q LS KI L  VD  Y FHP     ++
Sbjct:   662 AAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCR--IT 719

Query:   468 FKND-TRLKMSSQEVEDWLASL--SSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRR 524
               ND TR+  + ++V DWL  L      + EPKF + C+FLTLH  HLS+LP+  +Y RR
Sbjct:   720 LPNDETRVNATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRR 779

Query:   525 VRSLRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNL 584
             +R++R+L + V++L + E  W+ + +A R+++ LKR K Q+KKL R KACADAGLLD++ 
Sbjct:   780 LRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESF 839

Query:   585 MKKSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQ 644
             +++   FY  + + LLR++  +    +ITLPL S V   FAALPE+YVED+AEFL F +Q
Sbjct:   840 LRRCLNFYGLLIQLLLRIL--DPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQ 897

Query:   645 YIPGI--EDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRI 702
             Y P    E   +D  V +L+V +C+   I+NPYL+AKL+EV+F++NP VQ RT   ++ I
Sbjct:   898 YSPQALYEPCTQD-IVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMI 956

Query:   703 MAHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFINE 762
               H  S++ L   LMKFYTDVE TG++SEFYDKFTIRYHIS I K +W++  H   F+ E
Sbjct:   957 ENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEE 1016

Query:   763 SKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQL 822
               +G QFV+++NML+NDTTFLLDESLESLKRIHE QE M+++  +  +P +QQ +R+ QL
Sbjct:  1017 FNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQL 1076

Query:   823 AADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHL 882
             A DER  RSYL L  ETVDMFH LT ++++PFLRPEL  RL+AMLNFNLQQLCGPKC  L
Sbjct:  1077 AQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDL 1136

Query:   883 KVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDDAADRMERRQIL 942
             KV +P+KYG++P++LL+QL DIYL LDC  FA AIA D+RS+ KELF++   +M +  I 
Sbjct:  1137 KVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIK 1196

Query:   943 LPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSGVVMDRS 1002
                +++KF+ LA +  EI   N + E+DY+DAPDEFRDPLMDTLM DPV LPSG +MDRS
Sbjct:  1197 STIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRS 1256

Query:  1003 VIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
             +I+RHLLNS TDPF+RQ L E  L+P  ELK++I+AW REK
Sbjct:  1257 IILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREK 1297

 Score = 64 (27.6 bits), Expect = 4.9e-227, Sum P(2) = 4.9e-227
 Identities = 21/68 (30%), Positives = 31/68 (45%)

Query:     1 MSELTPDEIRQRRLAKL--GXXXXXXXXXXXXXXQDMIGSSILFNSPSGRDDMIGSIGQK 58
             M EL+ DEIR+RRLA+L  G              ++  G  I  ++P G    +G     
Sbjct:     1 MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAP-GPSQSLGLNVHN 59

Query:    59 VNLGTSPM 66
             +   TSP+
Sbjct:    60 MTPATSPI 67


>UNIPROTKB|A6QNS2 [details] [associations]
            symbol:UBE4B "UBE4B protein" species:9913 "Bos taurus"
            [GO:0034976 "response to endoplasmic reticulum stress"
            evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
            evidence=IEA] [GO:0031175 "neuron projection development"
            evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0009411 "response to UV" evidence=IEA] [GO:0006915 "apoptotic
            process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003222 "ventricular
            trabecula myocardium morphogenesis" evidence=IEA] [GO:0000209
            "protein polyubiquitination" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
            SMART:SM00504 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
            GO:GO:0009411 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0031175 GO:GO:0000209 GO:GO:0000151 GO:GO:0034976
            GO:GO:0034450 eggNOG:COG5113 GO:GO:0003222
            GeneTree:ENSGT00390000009300 CTD:10277 HOGENOM:HOG000294109
            HOVERGEN:HBG058129 KO:K10597 OMA:TCKETEM EMBL:DAAA02042992
            EMBL:BC148970 IPI:IPI00691225 RefSeq:NP_001095974.1
            UniGene:Bt.17976 STRING:A6QNS2 Ensembl:ENSBTAT00000013729
            GeneID:520833 KEGG:bta:520833 InParanoid:A6QNS2 OrthoDB:EOG4C87RK
            NextBio:20873187 Uniprot:A6QNS2
        Length = 1362

 Score = 2149 (761.5 bits), Expect = 6.2e-227, Sum P(2) = 6.2e-227
 Identities = 440/881 (49%), Positives = 600/881 (68%)

Query:   175 TCVLGHYTASYARVFEEERNNPKKCSIFPFKDVLYEVRTQLVRHSILVLQSTNSDPMS-- 232
             T +L +    + RV  EE+  PK CS      +L  +R+Q + H+ LVLQ + + P S  
Sbjct:   484 TDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQ 543

Query:   233 --SPLVKPLINQTLPNGFLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADPDYSK 290
               S LV  ++ + LP GF+ + V T ++DEE FKQ+  PILQG+  A  E S+ D DY K
Sbjct:   544 QPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSL-DSDYFK 602

Query:   291 -PLEALTDLLEIRIGSNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFA 349
              PL AL +L E + G    PVC+ + S   + P+  +   GRE+   SYLG FFS SVFA
Sbjct:   603 YPLMALGELCETKFGKT-HPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFA 661

Query:   350 EDDVKVGNHFFS--SVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNPTRETMLGYL 407
             EDD KV   +FS  ++T  N + +  +LQ+ L+L R  L++I H++L N  TRE  L Y+
Sbjct:   662 EDDAKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYM 721

Query:   408 AALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLS 467
             AA+V  N K+AQ+Q+++  ++ DGFMLN L V Q LS KI L  VD  Y FHP     ++
Sbjct:   722 AAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCR--IT 779

Query:   468 FKND-TRLKMSSQEVEDWLASL--SSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRR 524
               ND TR+  + ++V DWLA L      + EPKF + C+FLTLH  HLS+LP+  +Y RR
Sbjct:   780 LPNDETRVNATMEDVNDWLAELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRR 839

Query:   525 VRSLRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNL 584
             +R++R+L + V++L + E  W+ + +A R+++ LKR K Q+KKL R KACADAGLLD++ 
Sbjct:   840 LRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESF 899

Query:   585 MKKSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQ 644
             +++   FY  + + LLR++  +    ++TLPL S V   FAALPE+YVED+AEFL F +Q
Sbjct:   900 LRRCLNFYGLLIQLLLRLL--DPAYPDVTLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQ 957

Query:   645 YIPGI--EDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRI 702
             Y P +  E   +D  V +L+V +C+   I+NPYL+AKL+EV+F++NP VQ RT   ++ I
Sbjct:   958 YSPQVLYEPCTQD-IVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMI 1016

Query:   703 MAHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFINE 762
               H  S++ L   LMKFYTDVE TG++SEFYDKFTIRYHIS I K +W++  H   F+ E
Sbjct:  1017 ENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEE 1076

Query:   763 SKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQL 822
               +G QFV+++NML+NDTTFLLDESLESLKRIHE QE M+++  +  +P +QQ +R+ QL
Sbjct:  1077 FNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQL 1136

Query:   823 AADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHL 882
             A DER  RSYL L  ETVDMFH LT ++++PFLRPEL  RL+AMLNFNLQQLCGPKC  L
Sbjct:  1137 AQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDL 1196

Query:   883 KVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDDAADRMERRQIL 942
             KV +P+KYG++P++LL+QL DIYL LDC  FA AIA D+RS+ KELF++   +M +  I 
Sbjct:  1197 KVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIK 1256

Query:   943 LPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSGVVMDRS 1002
                +++KF+ LA +  EI   N + E+DY+DAPDEFRDPLMDTLM DPV LPSG +MDRS
Sbjct:  1257 STIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRS 1316

Query:  1003 VIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
             +I+RHLLNS TDPF+RQ L E  L+P  ELK++I AW REK
Sbjct:  1317 IILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIHAWMREK 1357

 Score = 64 (27.6 bits), Expect = 6.2e-227, Sum P(2) = 6.2e-227
 Identities = 21/68 (30%), Positives = 31/68 (45%)

Query:     1 MSELTPDEIRQRRLAKL--GXXXXXXXXXXXXXXQDMIGSSILFNSPSGRDDMIGSIGQK 58
             M EL+ DEIR+RRLA+L  G              ++  G  I  ++P G    +G     
Sbjct:     1 MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAP-GPSQSLGLNVHN 59

Query:    59 VNLGTSPM 66
             +   TSP+
Sbjct:    60 MTPATSPI 67


>UNIPROTKB|J9P9M3 [details] [associations]
            symbol:UBE4B "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
            evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
            Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
            GeneTree:ENSGT00390000009300 OMA:TCKETEM EMBL:AAEX03003938
            Ensembl:ENSCAFT00000046404 Uniprot:J9P9M3
        Length = 1360

 Score = 2160 (765.4 bits), Expect = 1.0e-226, Sum P(2) = 1.0e-226
 Identities = 442/881 (50%), Positives = 602/881 (68%)

Query:   175 TCVLGHYTASYARVFEEERNNPKKCSIFPFKDVLYEVRTQLVRHSILVLQSTNSDP--MS 232
             T +L +    + RV  EE+  PK CS      +L  +R+Q + H+ LVLQ + + P  M 
Sbjct:   482 TDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSMQ 541

Query:   233 SP--LVKPLINQTLPNGFLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADPDYSK 290
              P  LV  ++ + LP GF+ + V T ++DEE FKQ+  PILQG+  A  E S+ D DY K
Sbjct:   542 QPSFLVPYMLCRNLPYGFMQELVRTTHQDEEVFKQIFIPILQGLALAAKECSL-DSDYFK 600

Query:   291 -PLEALTDLLEIRIGSNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFA 349
              PL AL +L E + G    PVC+ + S   + P+  +   GRE+   SYLG FFS SVFA
Sbjct:   601 YPLMALGELCETKFGKT-HPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFA 659

Query:   350 EDDVKVGNHFFS--SVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNPTRETMLGYL 407
             EDD KV   +FS  ++T  N + +  +LQ+ L+L R  L++I H++L N  TRE  LGY+
Sbjct:   660 EDDAKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALGYM 719

Query:   408 AALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLS 467
             AA+V  N K+AQ+Q+++  ++ DGFMLN L V Q LS KI L  VD  Y FHP     ++
Sbjct:   720 AAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCR--IT 777

Query:   468 FKND-TRLKMSSQEVEDWLASL--SSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRR 524
               ND TR+  + ++V DWLA L      + EPKF + C+FLTLH  HLS+LP+  +Y RR
Sbjct:   778 LPNDETRVNATMEDVNDWLAELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRR 837

Query:   525 VRSLRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNL 584
             +R++R+L + V++L + E  W+ + +A R+++ LKR K Q+KKL R KACADAGLLD++ 
Sbjct:   838 LRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESF 897

Query:   585 MKKSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQ 644
             +++   FY  + + LLR++  +    +ITLPL S V   FAALPE+YVED+AEFL F +Q
Sbjct:   898 LRRCLNFYGLLIQLLLRIL--DPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQ 955

Query:   645 YIPGI--EDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRI 702
             Y P +  E   +D  V +L+V +C+   I+NPYL+AKL+EV+F++NP VQ RT   ++ I
Sbjct:   956 YSPQVLYEPCTQD-IVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMI 1014

Query:   703 MAHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFINE 762
               H  S++ L   LMKFYTDVE TG++SEFYDKFTIRYHIS I K +W++  H   F+ E
Sbjct:  1015 ENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEE 1074

Query:   763 SKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQL 822
               +G QFV+++NML+NDTTFLLDESLESLKRIHE QE M+++  +  +P +QQ +R+ QL
Sbjct:  1075 FNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQL 1134

Query:   823 AADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHL 882
             A DER  RSYL L  ETVDMFH LT ++++PFLRPEL  RL+AMLNFNLQQLCGPKC  L
Sbjct:  1135 AQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDL 1194

Query:   883 KVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDDAADRMERRQIL 942
             KV +P+KYG++P++LL+QL DIYL LDC  FA AIA D+RS+ KELF++   +M +  I 
Sbjct:  1195 KVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIK 1254

Query:   943 LPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSGVVMDRS 1002
                +++KF+ LA +  EI   N + E+DY+DAPDEFRDPLMDTLM DPV LPSG +MDRS
Sbjct:  1255 STIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRS 1314

Query:  1003 VIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
             +I+RHLLNS TDPF+RQ L E+ L+P  ELK++I AW REK
Sbjct:  1315 IILRHLLNSPTDPFNRQMLTENMLEPVPELKEQIHAWMREK 1355

 Score = 51 (23.0 bits), Expect = 1.0e-226, Sum P(2) = 1.0e-226
 Identities = 17/65 (26%), Positives = 28/65 (43%)

Query:     4 LTPDEIRQRRLAKL--GXXXXXXXXXXXXXXQDMIGSSILFNSPSGRDDMIGSIGQKVNL 61
             +  D IR+RRLA+L  G              ++ +G  I  ++P G    +G     +  
Sbjct:     1 MVADNIRRRRLARLAGGQTSQPTTPLTSPQRENPLGPPIAASAP-GPSQSLGLNVHNMTP 59

Query:    62 GTSPM 66
              TSP+
Sbjct:    60 ATSPI 64


>RGD|1304738 [details] [associations]
            symbol:Ube4b "ubiquitination factor E4B" species:10116 "Rattus
            norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0003222
            "ventricular trabecula myocardium morphogenesis" evidence=ISO]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
            [GO:0006915 "apoptotic process" evidence=ISO] [GO:0009411 "response
            to UV" evidence=ISO] [GO:0016567 "protein ubiquitination"
            evidence=ISO] [GO:0031175 "neuron projection development"
            evidence=ISO] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
            evidence=IEA;ISO] [GO:0034976 "response to endoplasmic reticulum
            stress" evidence=ISO] [GO:0044257 "cellular protein catabolic
            process" evidence=ISO] InterPro:IPR003613 InterPro:IPR019474
            Pfam:PF04564 Pfam:PF10408 SMART:SM00504 RGD:1304738
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000151
            GO:GO:0034450 GeneTree:ENSGT00390000009300 IPI:IPI00359635
            PRIDE:F1M8V2 Ensembl:ENSRNOT00000055572 ArrayExpress:F1M8V2
            Uniprot:F1M8V2
        Length = 1172

 Score = 2154 (763.3 bits), Expect = 8.1e-225, Sum P(2) = 8.1e-225
 Identities = 439/881 (49%), Positives = 602/881 (68%)

Query:   175 TCVLGHYTASYARVFEEERNNPKKCSIFPFKDVLYEVRTQLVRHSILVLQSTNSDPMS-- 232
             T +L +    + RV  EE+  PK CS      +L  +R+Q + H+ LVLQ + + P S  
Sbjct:   294 TDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQ 353

Query:   233 --SPLVKPLINQTLPNGFLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADPDYSK 290
               S LV  ++ + LP GF+ + V T ++DEE FKQ+  PILQG+ +A  E S+ D DY K
Sbjct:   354 QPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLARAAKECSL-DSDYFK 412

Query:   291 -PLEALTDLLEIRIGSNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFA 349
              PL AL +L E + G    P+C+ + S   + P+  +   GRE+   SYLG FFS SVFA
Sbjct:   413 YPLMALGELCETKFGKT-HPMCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFA 471

Query:   350 EDDVKVGNHFFS--SVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNPTRETMLGYL 407
             EDD KV   +FS  ++T  N + +  +LQ+ L+L R  L++I H++L N  TRE  L Y+
Sbjct:   472 EDDAKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYM 531

Query:   408 AALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLS 467
             AA+V  N K+AQ+Q+++  ++ DGFMLNLL V Q LS KI L  VD  Y FHP     ++
Sbjct:   532 AAIVNANMKKAQMQADDRLVSTDGFMLNLLWVLQQLSTKIKLETVDPTYIFHPRCR--IT 589

Query:   468 FKND-TRLKMSSQEVEDWLASL--SSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRR 524
               ND TR+  + ++V +WL  L      + EPKF + C+FLTLH  HLS+LP+  +Y RR
Sbjct:   590 LPNDETRINATMEDVNEWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRR 649

Query:   525 VRSLRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNL 584
             +R++R+L + V++L + E  W+ + +A R+++ LKR K Q+KKL R KACADAGLLD++ 
Sbjct:   650 LRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESF 709

Query:   585 MKKSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQ 644
             +++   FY  + + +LRV+  +    +ITLPL S V   FAALPE+YVED+AEFL F +Q
Sbjct:   710 LRRCLNFYGLLIQLMLRVL--DPAYPDITLPLNSEVPKVFAALPEFYVEDVAEFLFFIVQ 767

Query:   645 YIPGI--EDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRI 702
             Y P +  E   +D  V +L+V +C+   I+NPYL+AKL+EV+F++NP VQ RT   ++ I
Sbjct:   768 YSPQVLYEPCTQD-IVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPSVQPRTQKFFEMI 826

Query:   703 MAHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFINE 762
               H  S++ L   LMKFYTDVE TG++SEFYDKFTIRYHIS I K +W++  H   F+ E
Sbjct:   827 ENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEE 886

Query:   763 SKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQL 822
               +G QFV+++NML+NDTTFLLDESLESLKRIHE QE M+++  +  +P +QQ +R+ QL
Sbjct:   887 FNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNQEQWDQLPRDQQQARQSQL 946

Query:   823 AADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHL 882
             A DER  RSYL L  ETVDMFH LT ++++PFLRPEL  RL+AMLNFNLQQLCGPKC  L
Sbjct:   947 AQDERVSRSYLALATETVDMFHLLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDL 1006

Query:   883 KVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDDAADRMERRQIL 942
             KV +P+KYG++P++LL+QL DIYL LDC  FA AIA D+RS+ KELF++   +M +  I 
Sbjct:  1007 KVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIK 1066

Query:   943 LPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSGVVMDRS 1002
                +++KF+ LA +  EI   N + E+DY+DAPDEFRDPLMDTLM DPV LPSG +MDRS
Sbjct:  1067 STIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRS 1126

Query:  1003 VIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
             +I+RHLLNS TDPF+RQ L E  L+P  ELK++I+AW REK
Sbjct:  1127 IILRHLLNSPTDPFNRQMLTESMLEPVPELKEQIQAWMREK 1167

 Score = 39 (18.8 bits), Expect = 8.1e-225, Sum P(2) = 8.1e-225
 Identities = 18/66 (27%), Positives = 26/66 (39%)

Query:     3 ELTPDEIRQRRLAKL--GXXXXXXXXXXXXXXQDMIGSSILFNSPSGRDDMIGSIGQKVN 60
             E + D IR+RRLA+L  G              ++  G  I  + P G    +G       
Sbjct:     2 ESSLDLIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASVP-GPSQSLGLNVHNTT 60

Query:    61 LGTSPM 66
               TSP+
Sbjct:    61 PATSPI 66


>UNIPROTKB|F1M8D6 [details] [associations]
            symbol:Ube4b "Protein Ube4b" species:10116 "Rattus
            norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
            evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
            Pfam:PF10408 SMART:SM00504 RGD:1304738 GO:GO:0005634 GO:GO:0005737
            GO:GO:0006915 GO:GO:0009411 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0031175 GO:GO:0000209 GO:GO:0000151
            GO:GO:0034976 GO:GO:0034450 GO:GO:0003222
            GeneTree:ENSGT00390000009300 IPI:IPI00958178 PRIDE:F1M8D6
            Ensembl:ENSRNOT00000021197 ArrayExpress:F1M8D6 Uniprot:F1M8D6
        Length = 1174

 Score = 2136 (757.0 bits), Expect = 6.5e-223, Sum P(2) = 6.5e-223
 Identities = 438/883 (49%), Positives = 601/883 (68%)

Query:   175 TCVLGHYTASYARVFEEERNNPKKCSIFPFKDVLYEVRTQLVRHSILVLQSTNSDPMS-- 232
             T +L +    + RV  EE+  PK CS      +L  +R+Q + H+ LVLQ + + P S  
Sbjct:   294 TDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQ 353

Query:   233 --SPLVKPLINQTLPNGFLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADPDYSK 290
               S LV  ++ + LP GF+ + V T ++DEE FKQ+  PILQG+ +A  E S+ D DY K
Sbjct:   354 QPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLARAAKECSL-DSDYFK 412

Query:   291 -PLEALTDLLEIRIGSNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFA 349
              PL AL +L E + G    P+C+ + S   + P+  +   GRE+   SYLG FFS SVFA
Sbjct:   413 YPLMALGELCETKFGKT-HPMCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFA 471

Query:   350 EDDVKVGNHFFS--SVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNPTRETMLGYL 407
             EDD KV   +FS  ++T  N + +  +LQ+ L+L R  L++I H++L N  TRE  L Y+
Sbjct:   472 EDDAKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYM 531

Query:   408 AALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLS 467
             AA+V  N K+AQ+Q+++  ++ DGFMLNLL V Q LS KI L  VD  Y FHP     ++
Sbjct:   532 AAIVNANMKKAQMQADDRLVSTDGFMLNLLWVLQQLSTKIKLETVDPTYIFHPRCR--IT 589

Query:   468 FKND-TRLKMSSQEVEDWLASL--SSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRR 524
               ND TR+  + ++V +WL  L      + EPKF + C+FLTLH  HLS+LP+  +Y RR
Sbjct:   590 LPNDETRINATMEDVNEWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRR 649

Query:   525 VRSLRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNL 584
             +R++R+L + V++L + E  W+ + +A R+++ LKR K Q+KKL R KACADAGLLD++ 
Sbjct:   650 LRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESF 709

Query:   585 MKKSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQ 644
             +++   FY  + + +LRV+  +    +ITLPL S V   FAALPE+YVED+AEFL F +Q
Sbjct:   710 LRRCLNFYGLLIQLMLRVL--DPAYPDITLPLNSEVPKVFAALPEFYVEDVAEFLFFIVQ 767

Query:   645 YIPGI--EDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRI 702
             Y P +  E   +D  V +L+V +C+   I+NPYL+AKL+EV+F++NP VQ RT   ++ I
Sbjct:   768 YSPQVLYEPCTQD-IVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPSVQPRTQKFFEMI 826

Query:   703 MAHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFINE 762
               H  S++ L   LMKFYTDVE TG++SEFYDKFTIRYHIS I K +W++  H   F+ E
Sbjct:   827 ENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEE 886

Query:   763 SKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQL 822
               +G QFV+++NML+NDTTFLLDESLESLKRIHE QE M+++  +  +P +QQ +R+ QL
Sbjct:   887 FNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNQEQWDQLPRDQQQARQSQL 946

Query:   823 AADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHL 882
             A DER  RSYL L  ETVDMFH LT ++++PFLRPEL  RL+AMLNFNLQQLCGPKC  L
Sbjct:   947 AQDERVSRSYLALATETVDMFHLLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDL 1006

Query:   883 KVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDDAADRMERRQIL 942
             KV +P+KYG++P++LL+QL DIYL LDC  FA AIA D+RS+ KELF++   +M +  I 
Sbjct:  1007 KVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIK 1066

Query:   943 LPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRD--PLMDTLMEDPVTLPSGVVMD 1000
                +++KF+ LA +  EI   N + E+DY+DAPDEFR   PLMDTLM DPV LPSG +MD
Sbjct:  1067 STIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRGKYPLMDTLMTDPVRLPSGTIMD 1126

Query:  1001 RSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
             RS+I+RHLLNS TDPF+RQ L E  L+P  ELK++I+AW REK
Sbjct:  1127 RSIILRHLLNSPTDPFNRQMLTESMLEPVPELKEQIQAWMREK 1169

 Score = 39 (18.8 bits), Expect = 6.5e-223, Sum P(2) = 6.5e-223
 Identities = 18/66 (27%), Positives = 26/66 (39%)

Query:     3 ELTPDEIRQRRLAKL--GXXXXXXXXXXXXXXQDMIGSSILFNSPSGRDDMIGSIGQKVN 60
             E + D IR+RRLA+L  G              ++  G  I  + P G    +G       
Sbjct:     2 ESSLDLIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASVP-GPSQSLGLNVHNTT 60

Query:    61 LGTSPM 66
               TSP+
Sbjct:    61 PATSPI 66


>FB|FBgn0032467 [details] [associations]
            symbol:CG9934 species:7227 "Drosophila melanogaster"
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=ISS] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
            [GO:0016567 "protein ubiquitination" evidence=IEA]
            InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
            SMART:SM00504 EMBL:AE014134 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
            GeneTree:ENSGT00390000009300 KO:K10597 FlyBase:FBgn0032467
            EMBL:AY094803 RefSeq:NP_001162967.1 RefSeq:NP_609597.1
            UniGene:Dm.6565 SMR:Q9VK44 IntAct:Q9VK44 MINT:MINT-1676904
            EnsemblMetazoa:FBtr0080428 EnsemblMetazoa:FBtr0301247 GeneID:34699
            KEGG:dme:Dmel_CG9934 UCSC:CG9934-RA InParanoid:Q9VK44 OMA:RYANRNN
            GenomeRNAi:34699 NextBio:789760 Uniprot:Q9VK44
        Length = 1217

 Score = 1976 (700.6 bits), Expect = 2.9e-207, Sum P(2) = 2.9e-207
 Identities = 403/842 (47%), Positives = 565/842 (67%)

Query:   214 QLVRHSILVL-----QSTNSDPMSSPLVKPLINQTLPNGFLSDFVCTLYEDEETFKQVMS 268
             Q++R ++LVL     Q+ N     S L+  +    +   FL D +   ++D E F  + S
Sbjct:   381 QVMRMTVLVLTDRIYQNLNGHMDQSALLDLMYMAKVSEPFLIDLIAHTHQDREAFDTIFS 440

Query:   269 PILQGVYKAMTEASIADPDYS-KPLEALTDLLEIRIGSNVWPVCSALVSQVQFQPELNTK 327
              +L+G++  M + +I     S + +E L+ L+ I++GS V P+   +  Q  F P + TK
Sbjct:   441 QVLRGLFAGM-QRNICTSKISVQQIEWLSKLVVIKVGS-VRPIADLVSRQPNFLPPICTK 498

Query:   328 AVGREIAVTSYLGPFFSISVFAEDDVKVGNHFFSSVTDLNNKSIQATLQNGLQLTRGFLY 387
               GREI   S+LGPF S+S+FAE+++K     F++   L + S  + L+  L   R  ++
Sbjct:   499 ISGREIVKCSFLGPFLSVSLFAEENIKFAE--FTTKNKLEDAS-SSRLRWELHSMRTNMH 555

Query:   388 RICHTMLRNNPTRETMLGYLAALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKI 447
              + H++  N  +R   L Y+A+++ HN++R Q  S+E  LA DGFM+NL++V Q LS KI
Sbjct:   556 VVFHSLCVNASSRPKTLEYIASILRHNDRRVQFASDEKLLARDGFMINLMSVLQQLSVKI 615

Query:   448 DLFKVDLMYP-FHPNKSEMLSFKNDTRLKMSSQEVEDWLASLSSTAWREPKFSSTCWFLT 506
                K+D + P FH  K+ +++ + DT+++ S +E  ++LA   S       F + CWFLT
Sbjct:   616 ---KLDRIEPNFHYYKNSLVNIEQDTKIRYSEEEYRNFLARDFSQPVENTNFQTQCWFLT 672

Query:   507 LHCTHLSLLPALAKYQRRVRSLRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIK 566
             L   HL  LPA+ +Y+++VR++++LQKL+DEL  T+  W  +  A RN  F +RW+ Q++
Sbjct:   673 LQAHHLGYLPAIQRYRQKVRAIKELQKLIDELDRTKSHWMNSRYANRNNQFKERWEKQLR 732

Query:   567 KLSRSKACADAGLLDKNLMKKSAVFYMSVAEYLLRVMTGE--ENLCNITLPLPSTVRPE- 623
             KL+RSK C +  LLD  L+++   FY +V E++L    G   E      LP+   +  + 
Sbjct:   733 KLNRSKTCCEITLLDPGLLQRCTEFYSTVCEFMLYQFEGRPIEGPFISKLPVQQLLPTDA 792

Query:   624 FAALPEWYVEDIAEFLLFALQYIP-GIEDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIE 682
             F+ALPEWY++DIAEF+LF +Q+    I   ++   +TWLL  +C+  +IKNPY+ AKL+E
Sbjct:   793 FSALPEWYIDDIAEFILFTMQHANMDIRQGIDHSIITWLLTCVCASHLIKNPYVTAKLVE 852

Query:   683 VLFISNPDVQTRTSNLYDRIM-AHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYH 741
             V+F+ +     + +N  +  M  H+ +   L S LM+FY DVETTG S+EFYDKFTIRYH
Sbjct:   853 VMFVFS----LKPANSVNAAMWNHELAQNALVSSLMRFYVDVETTGQSTEFYDKFTIRYH 908

Query:   742 ISLILKGMWESPIHRQAFINESKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELM 801
             IS + K MWE+PIHRQA I ES+ GNQFVKFVNMLMNDTTFLLDE LE+LKRIH+TQ+L+
Sbjct:   909 ISHLFKSMWENPIHRQAVICESRVGNQFVKFVNMLMNDTTFLLDECLENLKRIHQTQQLL 968

Query:   802 RDEAAYAAIPAEQQLSRERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVY 861
              D+A  + + AEQQ SR  QLA DERQCRSYLTL RETVD+FHYLT +IKEPF+R ELV 
Sbjct:   969 SDKANLSKMSAEQQQSRLTQLATDERQCRSYLTLARETVDLFHYLTSDIKEPFMRDELVD 1028

Query:   862 RLSAMLNFNLQQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDE 921
             RLS+MLNFNL+QL GPKCN LKV +P KYGW+PR LL Q+ DIYLHLDCD FA A+A DE
Sbjct:  1029 RLSSMLNFNLKQLAGPKCNDLKVKNPAKYGWEPRSLLAQIFDIYLHLDCDRFAEALAADE 1088

Query:   922 RSFRKELFDDAADRMERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDP 981
             RSF  ++ ++AA R++R  +     +++F+AL  RAHEI V N++ E +  DAPDEF+DP
Sbjct:  1089 RSFDVQICNEAASRIKRLALRSAVEVERFKALTQRAHEIYVTNLQTEDECADAPDEFKDP 1148

Query:   982 LMDTLMEDPVTLPSGVVMDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKR 1041
             LMDTLM DPV LPSG VMDR++I RHLLNS TDPF+RQPL ED L  N ELK++I+AW++
Sbjct:  1149 LMDTLMSDPVVLPSGTVMDRAIITRHLLNSCTDPFNRQPLTEDMLVANIELKQRIDAWRK 1208

Query:  1042 EK 1043
             E+
Sbjct:  1209 EQ 1210

 Score = 51 (23.0 bits), Expect = 2.9e-207, Sum P(2) = 2.9e-207
 Identities = 28/121 (23%), Positives = 52/121 (42%)

Query:     1 MSELTPDEIRQRRLAKLGXXXXXXXXXXXXXXQDMIGSSILFNSPSGRDDMIGSIGQKVN 60
             ++EL+ +E+R RRL  L                    +++   S   R+   G   ++V+
Sbjct:    69 VTELSAEEMRARRLRTLAARSGIQCALAPLTTTPRKPTNVSGESRLVREATPGE--KEVS 126

Query:    61 LGTSPMEIDKSVIKISEKPQAHGEPMEVEIEPVREIKIVKA---PSMEITPQIIENTICK 117
             L TS      +  ++S KP    E   V   P++++ +  A   P+ E T + +  + CK
Sbjct:   127 LPTSA----PAWRELSGKPDMDVEMKSVVSTPMQDVDMTTALSLPTAEATKRSVLQS-CK 181

Query:   118 I 118
             I
Sbjct:   182 I 182


>UNIPROTKB|F1RIG2 [details] [associations]
            symbol:F1RIG2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0034976 "response to endoplasmic reticulum stress"
            evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
            evidence=IEA] [GO:0031175 "neuron projection development"
            evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0009411 "response to UV" evidence=IEA] [GO:0006915 "apoptotic
            process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003222 "ventricular
            trabecula myocardium morphogenesis" evidence=IEA] [GO:0000209
            "protein polyubiquitination" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            InterPro:IPR019474 Pfam:PF10408 GO:GO:0006511 GO:GO:0000151
            GO:GO:0034450 GeneTree:ENSGT00390000009300 EMBL:FP104527
            Ensembl:ENSSSCT00000003769 OMA:GSSFGAC Uniprot:F1RIG2
        Length = 969

 Score = 1115 (397.6 bits), Expect = 2.8e-120, Sum P(2) = 2.8e-120
 Identities = 246/568 (43%), Positives = 355/568 (62%)

Query:   175 TCVLGHYTASYARVFEEERNNPKKCSIFPFKDVLYEVRTQLVRHSILVLQSTNSDP--MS 232
             T +L +    + RV  EE+  PK CS      +L  +R+Q + H+ LVLQ + + P  M 
Sbjct:   409 TDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSMQ 468

Query:   233 SP--LVKPLINQTLPNGFLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADPDYSK 290
              P  LV  ++ + LP GF+ + V T ++DEE FKQ+  PILQG+  A  E S+ D DY K
Sbjct:   469 QPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSL-DSDYFK 527

Query:   291 -PLEALTDLLEIRIGSNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFA 349
              PL AL +L E + G    PVC+ + S   + P+  +   GRE+   SYLG FFS SVFA
Sbjct:   528 YPLMALGELCETKFGKT-HPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFA 586

Query:   350 EDDVKVGNHFFS--SVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNPTRETMLGYL 407
             EDD KV   +FS  ++T  N + +  +LQ+ L+L R  L++I H++L N  TRE  LGY+
Sbjct:   587 EDDAKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALGYM 646

Query:   408 AALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLS 467
             AA+V  N K+AQ+Q+++  ++ DGFMLN L V Q LS KI L  VD  Y FHP     ++
Sbjct:   647 AAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCR--IT 704

Query:   468 FKND-TRLKMSSQEVEDWLASL--SSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRR 524
               ND TR+  + ++V DWL  L      + EPKF + C+FLTLH  HLS+LP+  +Y RR
Sbjct:   705 LPNDETRVNATMEDVNDWLTELYGDQPPYSEPKFPTECFFLTLHAHHLSILPSCRRYIRR 764

Query:   525 VRSLRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNL 584
             +R++R+L + V++L + E  W+ + +A R+++ LKR K Q+KKL R KACADAGLLD++ 
Sbjct:   765 LRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESF 824

Query:   585 MKKSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQ 644
             +++   FY  + + LLR++  +    ++TLPL S V   FAALPE+YVED+AEFL F +Q
Sbjct:   825 LRRCLNFYGLLIQLLLRIL--DPAYPDVTLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQ 882

Query:   645 YIPGI--EDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRI 702
             Y P +  E   +D  V +L+V +C+   I+NPYL+AKL+EV+F++NP VQ RT   ++ I
Sbjct:   883 YSPQVLYEPCTQD-IVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMI 941

Query:   703 MAHKFSSQFLPSYLMKFYTDVETTGSSS 730
               H  S++ L   LMKFYTD   +G  S
Sbjct:   942 ENHPLSTKLLVPSLMKFYTDTRHSGKRS 969

 Score = 89 (36.4 bits), Expect = 2.8e-120, Sum P(2) = 2.8e-120
 Identities = 38/141 (26%), Positives = 68/141 (48%)

Query:    33 QDMIGSSILFNSPSGR-DDMIGSIGQKVNLGTSPMEIDKSVIKISEKPQAHGEPMEVEIE 91
             Q   G S L +SPS   +    S+ +  ++    +  +KS+ ++        E MEV+  
Sbjct:     7 QSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSLSQVDVDSGI--ENMEVDEN 64

Query:    92 PVREIKIV---KAPSM--EITPQIIENTICKILSVTYSQVDASNTILYLPQVASVLTELK 146
               RE + +   K PS   E++ +     +CKIL V++   D    +++L   +S+  + K
Sbjct:    65 DRREKRSLSDKKEPSSGSEVSEEQALQLVCKILRVSWK--DRDRDVIFL---SSLSAQFK 119

Query:   147 QN--SVTITYQDLISQSLVEL 165
             QN   V   ++DLI Q L+E+
Sbjct:   120 QNPKEVFSDFKDLIGQILMEV 140


>POMBASE|SPAC20H4.10 [details] [associations]
            symbol:ufd2 "ubiquitin-protein ligase E4 (predicted)"
            species:4896 "Schizosaccharomyces pombe" [GO:0000151 "ubiquitin
            ligase complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0034450
            "ubiquitin-ubiquitin ligase activity" evidence=IEA]
            InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
            SMART:SM00504 UniPathway:UPA00143 PomBase:SPAC20H4.10 GO:GO:0005634
            GO:GO:0005737 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016567
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000151
            GO:GO:0034450 KO:K10597 EMBL:AF059906 EMBL:AB027791 EMBL:AB032715
            PIR:T43725 RefSeq:NP_593630.1 ProteinModelPortal:Q9HE05
            MINT:MINT-4785000 STRING:Q9HE05 EnsemblFungi:SPAC20H4.10.1
            GeneID:2542023 KEGG:spo:SPAC20H4.10 HOGENOM:HOG000188621
            OMA:NERICKS OrthoDB:EOG4MPMZ8 NextBio:20803102 Uniprot:Q9HE05
        Length = 1010

 Score = 1031 (368.0 bits), Expect = 5.1e-106, Sum P(2) = 5.1e-106
 Identities = 297/958 (31%), Positives = 500/958 (52%)

Query:   116 CKILSVTYSQVDASNTILYLPQVASVLTELKQNSVTITYQDLISQSLVELQDILLSKNNT 175
             C+ L++T S+ D+S    YL      L E  + S  +  ++ +  +L  L  +  + NNT
Sbjct:    86 CQALNITLSETDSSK--YYLEGFKKDLEE--EGSPLLFNENNVDSAL--LSRLSTTGNNT 139

Query:   176 CVLGHYTASYARVFEEERNNPKKCSIFPFK-DVLYEVRTQLVRHS--ILVLQST-NSDPM 231
                 +   S++ +++ ++  PK  +   FK   L  +++ LV ++  +++L  T NS+ +
Sbjct:   140 --FSYLLQSWSFLYQYKKRLPKDENQ-DFKIHYLSLLKSLLVSYAGIVVMLPDTFNSETI 196

Query:   232 SSPLVKPLIN-QTLPNGFLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADPDYSK 290
                L + LI  + +P  FLS+FV     + E   ++  P+L+ +   +   ++ D     
Sbjct:   197 D--LAEVLIGAEGIPLEFLSEFVQRF--EHENLDELFIPVLESLSLKIGLMNV-DTVQMN 251

Query:   291 PLEALTDLLEIRIGSNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFAE 350
              ++ +  L+ ++      P+   L     + P   T   G EI   ++LG   S+SVF +
Sbjct:   252 VMQIILQLVSLK------PIALLLPKLPSWNP---TNNAG-EIEYKTFLGRISSLSVFTQ 301

Query:   351 DDVKVGNHFFSSVTDLNNKSIQATLQNGLQLT----RGFLYRICHTMLRNNPT-RETMLG 405
             D   V + +FS+ T+ + ++I +++ + L+LT    +  L++I +T++R + + RE++L 
Sbjct:   302 D---VASRYFSNSTERSAQNISSSISS-LKLTMSTYQDVLFQIFNTLIRTSTSLRESVLD 357

Query:   406 YLAALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDK-IDL--FKVDLMYPFHPNK 462
             + A +V  N KR  +Q     +  D  MLN   V   LS+  +D+   K+D +   +  +
Sbjct:   358 FFAMVVNANHKRQSIQVNHFDITSDACMLNFSHVLSRLSEPFLDIGCSKIDRVQVEYFRR 417

Query:   463 SEMLSFKNDTRLKMSSQEVEDWLASLSSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQ 522
             +  +  K +T+L    +  E +    S  A     F S  +FL L   H  +       +
Sbjct:   418 NPRVDIKEETKLNADQKASESFY---SKPAEGSNNFISDIFFLNLAFHHYGVNATFKALE 474

Query:   523 RRVRSLRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKA-CADAGLLD 581
             + V+S+RD +KL + L + ++   G+  A R    L R   ++  L RS   C +  L  
Sbjct:   475 QLVQSIRDSEKLKERLETEQQNMSGSFQATRLTAQLSRLDQRLD-LDRSFVHCYEIMLTQ 533

Query:   582 KNLMKKSAVFYMSVAEYLLRVMTGEENLC-NITLPLPSTVR-PE-FAALPEWYVEDIAEF 638
              +   +S  F   VA +L R+  G+ +    + L LP     PE F  LPE+++E I ++
Sbjct:   534 TSDTSRSFSFLNFVAIWLSRLADGQSSTYPKMPLSLPFNENAPEAFKCLPEYFIETITDY 593

Query:   639 LLFALQY------IPGIEDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQ 692
             +L   +       +  +E + E  CV++L  T  +   IKNPYL AKL E+L+       
Sbjct:   594 MLSLFKTSSSTLTLHSLEPLCEF-CVSFL--TQAN--YIKNPYLRAKLAEILYFGVQTHV 648

Query:   693 TRTSNLYDRIMAHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWES 752
              R+  L D +   K ++++L   LM FY ++E+TG S++FYDKF IR++I  + + +W+ 
Sbjct:   649 GRSELLLDVVRTSKVATRWLLPALMAFYIEIESTGQSTQFYDKFNIRFYICEVFRTIWKQ 708

Query:   753 PIHRQAFINESKTGNQF-VKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIP 811
             P +      E KT   F VKFV +++ND T+LLDE+L  L  IH  Q L+ D  + +   
Sbjct:   709 PAYFGKLEQEQKTNLPFFVKFVALMLNDATYLLDEALLKLTEIHNLQSLLADAISNSNSN 768

Query:   812 AEQQLSRERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNL 871
                Q S+   LAA ERQ  +Y  LG ET+ M    T  I + F   E+V RL+AMLN+NL
Sbjct:   769 QNVQESQSN-LAAAERQASTYCQLGNETIFMLKLFTSSIPKAFCAVEIVDRLAAMLNYNL 827

Query:   872 QQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCDE--FAAAIAQDERSFRKELF 929
             Q LCGPKC++LKV  P KY ++ + LL+ + D+YL+L C+E  F  A+A D RS+ KE+F
Sbjct:   828 QALCGPKCSNLKVEDPTKYHFNAKTLLSIIFDVYLNL-CNEPAFVEAVAHDGRSYSKEIF 886

Query:   930 DDAADRMERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMED 989
             + A   M +  +     ++  +   +R     +    +E D  D PD F DPLM T+M+D
Sbjct:   887 ERATSIMTKHNLKSSFDIEAIKEFVNRVEAFRLQEATEEEDMGDIPDYFLDPLMFTIMKD 946

Query:   990 PVTLP-SGVVMDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREKIEK 1046
             PV LP SG+ +DRS I  HLL+ +TDPF+R PL  D++ PN+ L+++I  + + K  K
Sbjct:   947 PVVLPRSGISIDRSTIKAHLLSDATDPFNRTPLTLDDVTPNDTLREEINTFLKSKRNK 1004

 Score = 38 (18.4 bits), Expect = 5.1e-106, Sum P(2) = 5.1e-106
 Identities = 10/17 (58%), Positives = 14/17 (82%)

Query:     1 MSELTPDEIRQRRLAKL 17
             MS+L  ++IR +RLAKL
Sbjct:     1 MSDL--EKIRLKRLAKL 15


>WB|WBGene00006734 [details] [associations]
            symbol:ufd-2 species:6239 "Caenorhabditis elegans"
            [GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IEA;IDA] [GO:0000151
            "ubiquitin ligase complex" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
            [GO:0007283 "spermatogenesis" evidence=IMP] [GO:0042006
            "masculinization of hermaphroditic germ-line" evidence=IMP]
            [GO:0040011 "locomotion" evidence=IMP] [GO:0051865 "protein
            autoubiquitination" evidence=IDA] [GO:0000209 "protein
            polyubiquitination" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0031625
            "ubiquitin protein ligase binding" evidence=IPI] [GO:0051087
            "chaperone binding" evidence=IPI] InterPro:IPR003613
            InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
            GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0040011
            GO:GO:0007283 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004842 GO:GO:0000209 EMBL:Z47812 GO:GO:0000151
            GO:GO:0051865 GO:GO:0034450 GO:GO:0042006
            GeneTree:ENSGT00390000009300 KO:K10597 UniGene:Cel.7502
            GeneID:174295 KEGG:cel:CELE_T05H10.5 UCSC:T05H10.5a CTD:174295
            HOGENOM:HOG000020029 NextBio:883404 RefSeq:NP_495691.1
            ProteinModelPortal:Q95QB5 SMR:Q95QB5 IntAct:Q95QB5
            MINT:MINT-1073242 STRING:Q95QB5 PRIDE:Q95QB5
            EnsemblMetazoa:T05H10.5b WormBase:T05H10.5b InParanoid:Q95QB5
            OMA:YIAYDER ArrayExpress:Q95QB5 Uniprot:Q95QB5
        Length = 984

 Score = 999 (356.7 bits), Expect = 1.0e-100, P = 1.0e-100
 Identities = 265/839 (31%), Positives = 426/839 (50%)

Query:   228 SDPMSSPLVKPLINQTLPNGFLS---DFVCTLYE-DEETFKQVMSPIL----QGVYKAMT 279
             S   S    K L+  T+ N FL    +++ +  E DE+   +  +PI      G+     
Sbjct:   164 SQHASLVFTKRLLEDTVSNVFLRTLVEYLASTDECDEDAITETFNPIFGILRSGIICQRF 223

Query:   280 EASIADPDYSKPLEALTDLLEIRIGSN-VWPVCSALVSQVQFQPELNTKAVGREIAVTSY 338
             E +  D    + L  +  LL IR+ SN   P+ + LV++  F P  + K  GRE  + S+
Sbjct:   224 EDN-KDEIVRQILRVMNLLLSIRLPSNGPRPLSNLLVNREDFLPTPSEKIQGREFGLMSF 282

Query:   339 LGPFFSISVFAEDDVKVGNH--FFSSVTDLNNKSIQATLQNGLQLTR-----GFLYRICH 391
             LGPFFS  +  E   +  NH  F     D          +  L   R       L+++  
Sbjct:   283 LGPFFSYGL--ESSARRPNHRVFVDCEEDARKYDGSVNTEQKLYFQRMDPIRTMLHQLML 340

Query:   392 TMLRNNPTRETMLGYLAALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKIDLFK 451
              +  +  +R   L ++A ++  N+ R +   + S +  D +M N L+V    S+KIDL K
Sbjct:   341 PLASDQGSRNKTLRWIATIISTNDIRTRSHYDPSDVLCDHYMTNFLSVMYMFSEKIDLSK 400

Query:   452 VDLMYPFHPNKSEMLSFKNDTRLKMSSQEVEDWLASLSSTAWREPKFSSTCWFLTLHCTH 511
             + + YPF P  S +++   +TRLKM       + +  +     E  FS+ C+FLT+    
Sbjct:   401 IIVDYPFLP--SSLINISKETRLKMDESGAVAFASQFADRP-DEYHFSTVCFFLTIAAQR 457

Query:   512 LSLLPALAKYQRRVRSLRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRS 571
             L + P + +     R L++L+  ++ L     T  G   A   K      +H  K +SR 
Sbjct:   458 LVIPPLMNQISEYSRHLKELKHKINALKEKLNTVSGFERAEVEKKLNYETEHW-KLMSRH 516

Query:   572 KACADAGLLDKNLMKKSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVRPEFAALPEWY 631
               C      D  LM  S  F     +++L ++    +L      LP+ V   F ALPE++
Sbjct:   517 LLCVKTQAQDPALMASSMDFVDKQMKFILNLLCDNLDLLGDDSQLPTEVSQMFCALPEYF 576

Query:   632 VEDIAEFLLFALQYIPGIEDVVEDRCVTW---LLVTMCSPQMIKNPYLLAKLIEVLFISN 688
             +ED  +F +FA+    G++ ++E R   W   L V       IK+P+L++KL+ VL    
Sbjct:   577 LEDALDFYIFAISN--GMKLLME-RNADWISRLTVLFTQYHYIKSPFLVSKLVRVLSSIQ 633

Query:   689 PDVQTRTSNLYDRIMAHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKG 748
             P        L+  ++  + + + L   ++KFY+D E  G   +FY+KF +R +I  +L+ 
Sbjct:   634 PP-------LWFNVVRLRMAQENLLMCMIKFYSDFEDNG---DFYEKFNVRGNIQYMLEK 683

Query:   749 MWESPIHRQAFINESKT-GNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAY 807
             M E   ++  F++ ++  G +F++FVNM++ND T+ +DESL  LK IH+ ++ M ++  +
Sbjct:   684 MEEDMFYKGKFMDMARECGAEFIRFVNMVINDATWCIDESLSGLKSIHDVEKKMANKVEW 743

Query:   808 AAIPAEQQLSRERQLAADE---RQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLS 864
                  +Q++ R + L   E   R+ + +L   +  + +   +TV   EPF  P L  RL+
Sbjct:   744 DN--TDQEI-RNQDLGVYEEAKRKVKGWLGTAKSNLKLLLSITVNSPEPFRTPVLGERLA 800

Query:   865 AMLNFNLQQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSF 924
             AMLN NL QL G K + LKV  P  YGW+PR  ++ L+ IYL L+   F   IA DER++
Sbjct:   801 AMLNHNLSQLIGSKASELKVKDPRSYGWEPREFVSLLISIYLKLNMPAFVKYIAYDERTY 860

Query:   925 RKELFDDAADRMERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMD 984
               E F +A + M +  I+  S L+ F  LA    +   A  + E +Y+D P+EF+DP+MD
Sbjct:   861 SPEFFHNAIECMRKNSIVGFSQLESFEHLAEDVKKEYEAKAELEEEYDDVPEEFKDPIMD 920

Query:   985 TLMEDPVTLPSGVVMDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
              +M DPV LPSG VMDR+VI RHLL++  +PF+R PL  + L P+ ELK KI+ W  +K
Sbjct:   921 AIMVDPVKLPSGHVMDRAVIERHLLSTPNNPFNRAPLSHNELSPDSELKAKIQEWICQK 979


>UNIPROTKB|Q95QB5 [details] [associations]
            symbol:ufd-2 "Protein UFD-2, isoform b" species:6239
            "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
            Pfam:PF10408 SMART:SM00504 GO:GO:0005634 GO:GO:0009792
            GO:GO:0005737 GO:GO:0040011 GO:GO:0007283 GO:GO:0030163
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
            GO:GO:0000209 EMBL:Z47812 GO:GO:0000151 GO:GO:0051865 GO:GO:0034450
            GO:GO:0042006 GeneTree:ENSGT00390000009300 KO:K10597
            UniGene:Cel.7502 GeneID:174295 KEGG:cel:CELE_T05H10.5
            UCSC:T05H10.5a CTD:174295 HOGENOM:HOG000020029 NextBio:883404
            RefSeq:NP_495691.1 ProteinModelPortal:Q95QB5 SMR:Q95QB5
            IntAct:Q95QB5 MINT:MINT-1073242 STRING:Q95QB5 PRIDE:Q95QB5
            EnsemblMetazoa:T05H10.5b WormBase:T05H10.5b InParanoid:Q95QB5
            OMA:YIAYDER ArrayExpress:Q95QB5 Uniprot:Q95QB5
        Length = 984

 Score = 999 (356.7 bits), Expect = 1.0e-100, P = 1.0e-100
 Identities = 265/839 (31%), Positives = 426/839 (50%)

Query:   228 SDPMSSPLVKPLINQTLPNGFLS---DFVCTLYE-DEETFKQVMSPIL----QGVYKAMT 279
             S   S    K L+  T+ N FL    +++ +  E DE+   +  +PI      G+     
Sbjct:   164 SQHASLVFTKRLLEDTVSNVFLRTLVEYLASTDECDEDAITETFNPIFGILRSGIICQRF 223

Query:   280 EASIADPDYSKPLEALTDLLEIRIGSN-VWPVCSALVSQVQFQPELNTKAVGREIAVTSY 338
             E +  D    + L  +  LL IR+ SN   P+ + LV++  F P  + K  GRE  + S+
Sbjct:   224 EDN-KDEIVRQILRVMNLLLSIRLPSNGPRPLSNLLVNREDFLPTPSEKIQGREFGLMSF 282

Query:   339 LGPFFSISVFAEDDVKVGNH--FFSSVTDLNNKSIQATLQNGLQLTR-----GFLYRICH 391
             LGPFFS  +  E   +  NH  F     D          +  L   R       L+++  
Sbjct:   283 LGPFFSYGL--ESSARRPNHRVFVDCEEDARKYDGSVNTEQKLYFQRMDPIRTMLHQLML 340

Query:   392 TMLRNNPTRETMLGYLAALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKIDLFK 451
              +  +  +R   L ++A ++  N+ R +   + S +  D +M N L+V    S+KIDL K
Sbjct:   341 PLASDQGSRNKTLRWIATIISTNDIRTRSHYDPSDVLCDHYMTNFLSVMYMFSEKIDLSK 400

Query:   452 VDLMYPFHPNKSEMLSFKNDTRLKMSSQEVEDWLASLSSTAWREPKFSSTCWFLTLHCTH 511
             + + YPF P  S +++   +TRLKM       + +  +     E  FS+ C+FLT+    
Sbjct:   401 IIVDYPFLP--SSLINISKETRLKMDESGAVAFASQFADRP-DEYHFSTVCFFLTIAAQR 457

Query:   512 LSLLPALAKYQRRVRSLRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRS 571
             L + P + +     R L++L+  ++ L     T  G   A   K      +H  K +SR 
Sbjct:   458 LVIPPLMNQISEYSRHLKELKHKINALKEKLNTVSGFERAEVEKKLNYETEHW-KLMSRH 516

Query:   572 KACADAGLLDKNLMKKSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVRPEFAALPEWY 631
               C      D  LM  S  F     +++L ++    +L      LP+ V   F ALPE++
Sbjct:   517 LLCVKTQAQDPALMASSMDFVDKQMKFILNLLCDNLDLLGDDSQLPTEVSQMFCALPEYF 576

Query:   632 VEDIAEFLLFALQYIPGIEDVVEDRCVTW---LLVTMCSPQMIKNPYLLAKLIEVLFISN 688
             +ED  +F +FA+    G++ ++E R   W   L V       IK+P+L++KL+ VL    
Sbjct:   577 LEDALDFYIFAISN--GMKLLME-RNADWISRLTVLFTQYHYIKSPFLVSKLVRVLSSIQ 633

Query:   689 PDVQTRTSNLYDRIMAHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKG 748
             P        L+  ++  + + + L   ++KFY+D E  G   +FY+KF +R +I  +L+ 
Sbjct:   634 PP-------LWFNVVRLRMAQENLLMCMIKFYSDFEDNG---DFYEKFNVRGNIQYMLEK 683

Query:   749 MWESPIHRQAFINESKT-GNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAY 807
             M E   ++  F++ ++  G +F++FVNM++ND T+ +DESL  LK IH+ ++ M ++  +
Sbjct:   684 MEEDMFYKGKFMDMARECGAEFIRFVNMVINDATWCIDESLSGLKSIHDVEKKMANKVEW 743

Query:   808 AAIPAEQQLSRERQLAADE---RQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLS 864
                  +Q++ R + L   E   R+ + +L   +  + +   +TV   EPF  P L  RL+
Sbjct:   744 DN--TDQEI-RNQDLGVYEEAKRKVKGWLGTAKSNLKLLLSITVNSPEPFRTPVLGERLA 800

Query:   865 AMLNFNLQQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSF 924
             AMLN NL QL G K + LKV  P  YGW+PR  ++ L+ IYL L+   F   IA DER++
Sbjct:   801 AMLNHNLSQLIGSKASELKVKDPRSYGWEPREFVSLLISIYLKLNMPAFVKYIAYDERTY 860

Query:   925 RKELFDDAADRMERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMD 984
               E F +A + M +  I+  S L+ F  LA    +   A  + E +Y+D P+EF+DP+MD
Sbjct:   861 SPEFFHNAIECMRKNSIVGFSQLESFEHLAEDVKKEYEAKAELEEEYDDVPEEFKDPIMD 920

Query:   985 TLMEDPVTLPSGVVMDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
              +M DPV LPSG VMDR+VI RHLL++  +PF+R PL  + L P+ ELK KI+ W  +K
Sbjct:   921 AIMVDPVKLPSGHVMDRAVIERHLLSTPNNPFNRAPLSHNELSPDSELKAKIQEWICQK 979


>TAIR|locus:2180862 [details] [associations]
            symbol:AT5G15400 species:3702 "Arabidopsis thaliana"
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0034450
            "ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0005829
            "cytosol" evidence=IDA] [GO:0010413 "glucuronoxylan metabolic
            process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
            evidence=RCA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
            Pfam:PF10408 SMART:SM00504 GO:GO:0005829 EMBL:CP002688
            GenomeReviews:BA000015_GR Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0000151 EMBL:AL391143 GO:GO:0034450
            eggNOG:COG5113 KO:K10597 EMBL:BX832575 IPI:IPI00523200 PIR:T51518
            RefSeq:NP_568313.2 UniGene:At.31807 HSSP:Q14139
            ProteinModelPortal:Q9LF41 SMR:Q9LF41 PaxDb:Q9LF41 PRIDE:Q9LF41
            ProMEX:Q9LF41 EnsemblPlants:AT5G15400.1 GeneID:831392
            KEGG:ath:AT5G15400 TAIR:At5g15400 HOGENOM:HOG000240160
            InParanoid:Q9LF41 OMA:CFFLTLT PhylomeDB:Q9LF41
            ProtClustDB:CLSN2681049 Genevestigator:Q9LF41 Uniprot:Q9LF41
        Length = 1038

 Score = 794 (284.6 bits), Expect = 6.0e-99, Sum P(2) = 6.0e-99
 Identities = 192/587 (32%), Positives = 323/587 (55%)

Query:   470 NDTRLKMSSQEVEDWLASLSSTAWREPKFS--STCWFLTLHCTHLSLLPALAKYQRRVRS 527
             N++RL  S +       +    A    K++    C+F+T    +L LL AL+ ++   + 
Sbjct:   439 NESRLLQSKEATSSSSNASGQNAKSATKYTFICECFFMTARVLNLGLLKALSDFKHLAQ- 497

Query:   528 LRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLL-DKNLMK 586
               D+ +  D L+ T +  R    + + +  + R + +++  S+ K C +A +L D + ++
Sbjct:   498 --DISRGEDNLA-TLKAMRDQAPSPQLELDISRMEKELELSSQEKLCHEAQILRDGDFIQ 554

Query:   587 KSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQYI 646
             ++  FY  +  +L+ ++ G        +PLPST   EF+ +PE +VED  E L+FA +  
Sbjct:   555 RALSFYRLMVVWLVGLVGG------FKMPLPSTCPMEFSCMPEHFVEDAMELLIFASRIP 608

Query:   647 PGIEDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRIMAHK 706
               ++ V  D  + ++++ M SP+ ++NPYL AK++EVL    P   + +S        H+
Sbjct:   609 KALDGVPLDDFMNFIIMFMASPEYVRNPYLRAKMVEVLNCWMPRSSSSSSATSTLFEGHQ 668

Query:   707 FSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAF--INESK 764
              S ++L   L+K Y D+E TGS ++FYDKF IR++I+ +L+ +W+ P HR A+  I + +
Sbjct:   669 LSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRRIAKDE 728

Query:   765 TGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQLAA 824
                 ++ F+N L+ND+ +LLDESL  +  I + +  M + A +   P +++  R R   +
Sbjct:   729 EKGVYLNFLNFLVNDSIYLLDESLNKILEIKQIEADMSNTAEWEQRPTQERQERTRLFHS 788

Query:   825 DERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHLKV 884
              E   R  + L  E V M  + + EI  PFL PE+V R++ MLN+ L QL GP+   L +
Sbjct:   789 QENIVRIDMKLANEDVTMLAFTSEEITAPFLLPEMVERVANMLNYFLLQLVGPQRKSLSL 848

Query:   885 SSPDKYGWDPRRLLNQLVDIYLHLDCDE----FAAAIAQDERSFRKELFDDAADRMERRQ 940
               P+KY + P++LL Q+V IY++L   +    F  AI+ D RS+ ++LF+  AD + RR 
Sbjct:   849 KDPEKYEFRPKQLLKQIVRIYVNLARGDTVNIFPGAISSDGRSYNEQLFNAGADVL-RRI 907

Query:   941 ILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSG-VVM 999
                   + +F  L ++A   +   +  E    + PDEF DP+  TLM DPV LPS  + +
Sbjct:   908 GEEGRIIQEFMELGTKAKAAASEALDAEAALGEIPDEFLDPIQYTLMRDPVILPSSRITV 967

Query:  1000 DRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREKIEK 1046
             DR +I RHLL+ + DPF+R  L  D L P+ ELK KI+ + +    K
Sbjct:   968 DRPIIQRHLLSDNHDPFNRAHLTSDMLIPDIELKAKIDEFVKSHQSK 1014

 Score = 208 (78.3 bits), Expect = 6.0e-99, Sum P(2) = 6.0e-99
 Identities = 67/252 (26%), Positives = 118/252 (46%)

Query:   245 PNGFLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADPDYSKPLEALTDLLEIRIG 304
             P GFL +F      D ++   ++  + + +   +   S+   D+  PL AL  L+ + +G
Sbjct:   181 PPGFLDEFFKD--SDFDSLDSILKELYEDLRSTVINVSVLG-DFQPPLRALKYLVSLPVG 237

Query:   305 SNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFAEDDV-----KVGNHF 359
             +       +LVS   + P       GR + +TS LGPFF IS   ++ +      VG   
Sbjct:   238 AK------SLVSHEWWVPR-GAYMNGRAMELTSILGPFFHISALPDNTLFKSQPDVGQQC 290

Query:   360 FSSVTDLNNKSIQA---TLQNGLQLTRGFLYRICHTMLRNNPTRETMLGYLAALVGHNEK 416
             FS  ++     + +   T++N + +    L+ +   +L++  TRE +L +LA ++  N  
Sbjct:   291 FSEASERRPADLLSSFSTIKNFMNILYSGLHDVLMILLKSTDTRERVLQFLAEVINANAS 350

Query:   417 RAQLQSEESTLAGDGFMLNLLAVFQALSDK-ID--LFKVDLMYPFHPNKSEMLSFKNDTR 473
             RA +Q +  + A  G  +NL AV   L +  +D  L K D + P +      L   + T 
Sbjct:   351 RAHIQVDPVSCASSGMFVNLSAVMLRLCEPFLDPHLTKRDKIDPKYAFCGHRLKLSDLTA 410

Query:   474 LKMSSQEVEDWL 485
             L  SS+EV +W+
Sbjct:   411 LHASSEEVTEWI 422


>DICTYBASE|DDB_G0292264 [details] [associations]
            symbol:nosA "U box domain-containing protein"
            species:44689 "Dictyostelium discoideum" [GO:0034450
            "ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016567
            "protein ubiquitination" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
            SMART:SM00504 dictyBase:DDB_G0292264 GenomeReviews:CM000155_GR
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            EMBL:AAFI02000189 GO:GO:0000151 GO:GO:0034450 eggNOG:COG5113
            KO:K10597 OMA:NERICKS EMBL:AF044255 PIR:T14576 RefSeq:XP_629703.1
            ProteinModelPortal:O44007 EnsemblProtists:DDB0216192 GeneID:8628617
            KEGG:ddi:DDB_G0292264 InParanoid:O44007 ProtClustDB:CLSZ2728734
            Uniprot:O44007
        Length = 1089

 Score = 974 (347.9 bits), Expect = 4.5e-98, P = 4.5e-98
 Identities = 258/847 (30%), Positives = 432/847 (51%)

Query:   222 VLQSTNSDPMSSPL-VKPLINQTLPNGFLSDFVCT-LYEDEETFKQVMSPILQGVYKAMT 279
             + Q+T+S     P+ + P +          +F+   L E +E    +  PI   + K ++
Sbjct:   268 MFQNTSSSYGIGPVQLMPYLCGETTEELTDEFIFKFLSEYQEDLTPIFEPIFLDLIKILS 327

Query:   280 EASIADPDYSKPLEALTDLLEIRIGSNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYL 339
               ++    +    +  + L++ +  S++      +  Q    P  N    G+E+   + L
Sbjct:   328 TTTLTGNVFPY-YKVFSRLVQFKAVSDL-----VVTLQCWNSPNFN----GKEMERNTIL 377

Query:   340 GPFFSISVFAEDDVKVGNHFFSSVTDLNN----------KSIQATLQNGL-QLTRGFLYR 388
             G  FS S  A DD      +FS+ + +N           + IQ  + NGL  L +GFL  
Sbjct:   378 GSLFSPSS-ASDDGSTIKQYFSNASTMNKNTIGDAFISIRQIQMNIHNGLVDLLKGFL-- 434

Query:   389 ICHTMLRNNPTRETMLGYLAALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDK-- 446
                 + + N  +E  L +LA+ V  N +R +LQ + +    DGF LNL AV   L +   
Sbjct:   435 ---KVQQEN--KEAFLSWLASAVEKNLERNKLQVDRTKACSDGFALNLCAVLVLLCEAFV 489

Query:   447 -IDLFKVDLMYPFHPNKSEMLSFKNDTRLKMSSQEVEDWLASLS-STAWREPKFSSTCWF 504
              ID  KV ++        +      DTRL  +S+E + W+   +         F +  +F
Sbjct:   490 DIDCSKVSMVDTNFLLSGKRHDITKDTRLCATSEEADQWVKDGTIEKPLAHTNFITETFF 549

Query:   505 LTLHCTHLSLLPALAKYQRRVRSLRDLQKLVDELSSTEETWRGTVIARRNK---DFLKRW 561
              TL   H+ +     K +   R+L+D++     L  ++  W+ T   R  +   D L + 
Sbjct:   550 STLRALHIGINSTYEKLKLIGRNLQDIENNKRVLLDSKIKWQNTPQGRLFEGQLDLLTKK 609

Query:   562 KHQIKKLSRSKACADAGLLDKNLMKKSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVR 621
             +  +K ++ +    DA L +   ++K+A F +    ++L+V+    N  N  LPLP    
Sbjct:   610 EDMLKGITYT---IDAQLFEPTFLQKTASFLLFATNWILKVI----NPKNTPLPLPLPAP 662

Query:   622 PEFAALPEWYVEDIAEFLLFALQYIPGIEDVVE-DRCVTWLLVTMCSPQMIKNPYLLAKL 680
             P+FAALPE+ +EDI +F  F +     +   ++ ++ + + +  + +P+ +KNPYL AK+
Sbjct:   663 PQFAALPEFCIEDIVDFFTFVITNFSQVLQYIKLEQLMKFFITILATPEYVKNPYLKAKI 722

Query:   681 IEVLFISNPDVQTRTSNLYDRIMAHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRY 740
             IE++    P   ++ + +   +  ++     +   LM+FY D+E TG  ++FY+KF+ R+
Sbjct:   723 IEIISQFVPSKYSKGNPIL--LECNQDVKDHMVLALMRFYVDIEFTGGHNQFYEKFSYRH 780

Query:   741 HISLILKGMWESPIHRQAFINESKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQEL 800
             + SLILK +W  P  R+ F  E+     F+KF+NML+ND+ ++LDE+L  L +I E Q L
Sbjct:   781 YSSLILKYLWSIPDFRKKF-TETPKDPIFIKFINMLINDSIYVLDEALAKLAKIKENQTL 839

Query:   801 MRDEAAYAAIPAEQQLSRERQLAADERQCRSYLTLGRETVDMFHYLTVE--IKEPFLRPE 858
               D      +  EQ+  +  Q   +ER C+S L+L    +DM  +L+ +  I   F+RPE
Sbjct:   840 FDDPNWDKDLTPEQRKEKIEQNDLNERICKSNLSLANSNIDMMLFLSSDKTIISGFMRPE 899

Query:   859 LVYRLSAMLNFNLQQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCD-EFAAAI 917
             L+ R+SAM+N+ L  + GPKC +LKV  P+KY ++P+ LLNQL +IY++   D  F  ++
Sbjct:   900 LIDRISAMMNYFLALIVGPKCTNLKVREPEKYHFNPKVLLNQLTEIYVNFGRDPRFLQSV 959

Query:   918 AQDERSFRKELFDDAADRMERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDE 977
              +D RSF+  LF      ++R ++     LD+F  L  +  +++    + E D  D PDE
Sbjct:   960 VRDGRSFKNSLFQTCEKILQRERLKNDHELDEFSKLVIKLEQVAKEEEQAEEDLGDIPDE 1019

Query:   978 FRDPLMDTLMEDPVTLPSG-VVMDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKI 1036
             F DP++ TLM DPV LPS   V+DR  I+RHLL+  TDPF+R  L  + L  + E KKKI
Sbjct:  1020 FCDPILSTLMTDPVILPSSKTVIDRQTILRHLLSDQTDPFNRSHLTPEMLIDDVETKKKI 1079

Query:  1037 EAWKREK 1043
             + W   K
Sbjct:  1080 DEWLASK 1086


>ASPGD|ASPL0000072757 [details] [associations]
            symbol:AN10556 species:162425 "Emericella nidulans"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0016567 "protein ubiquitination"
            evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
            SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            EMBL:BN001303 GO:GO:0000151 GO:GO:0034450 OMA:CFFLTLT
            EnsemblFungi:CADANIAT00006010 Uniprot:C8V8J9
        Length = 1095

 Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
 Identities = 304/1071 (28%), Positives = 517/1071 (48%)

Query:     8 EIRQRRLAKLGXXXXXXXXXXXXXXQDMIGSSILFNSPSGRDDMIGSIGQKVNLGTSPME 67
             +IR +RLAKL                    S+ L  +P   +      G+ V   T  +E
Sbjct:    33 QIRSKRLAKLASANPPTSAETSSEPS----SAAL--TPQAPEASRPQSGETVAPSTPRLE 86

Query:    68 IDKSV---IKISEKPQAHGE--PMEVEIEPVREIKIVKAPSMEITPQIIEN-TICKILSV 121
              + S    IKI+    A  E  P    + PV        P  E T +  E+ T+  +  +
Sbjct:    87 REGSEGKRIKITPTSAAPAEQRPQSGTVTPVSNTP--PPPKQEDTLEAFEDRTLSAVFKL 144

Query:   122 TYSQVDASNTI-LYLPQVASVLTELKQNSVTITYQD-LISQSLVELQDILLSKNNTCVLG 179
             T  +    +     L  ++ + +EL+  ++++     ++ Q+L+E      S+ +   L 
Sbjct:   145 TLDESRQRDIHGQRLTFLSGLRSELEDQNLSLRISTAVLDQALLEAAS---SQPDGKPLD 201

Query:   180 HYTASYARVFEEERNNPKKCSIFPFKDVLYEVRTQLVRHSILVL---QSTNSDPMS-SPL 235
             +    + RV    +   K  +  P  +V+ E R   + ++   L   +    +P   SPL
Sbjct:   202 YLLPCWKRVTRLHKGFRKARNNDPKFEVICEARRLCMSYAAFALTMPEMFGLEPTGRSPL 261

Query:   236 VKP--LINQTLPNG----FLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADPDYS 289
              KP  L++     G    FLS+ V   +E++ET K      ++ + + ++   I D DY 
Sbjct:   262 -KPYLLLDPEDDKGVDLEFLSEAV-KRFEEDETIKPAFIAAVEELSRELSSMGIND-DYK 318

Query:   290 KPLEALTDLLE-IRIGSNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVF 348
               + + + L + +R       + SA+     F    +  +  +E    + LGP+F +S  
Sbjct:   319 PYVTSFSQLPQALRNLVRHSAIASAITESSIFNHTRDPASFEKE----TLLGPWFRLSPL 374

Query:   349 AEDDVKVGNHFFSSVTDLNNKSI---QATLQNGLQLTRGFLYRICHTMLRNNP-TRETML 404
              + D  +   FFS+    +   I   Q +++   +L    +  I + M+R +   R  +L
Sbjct:   375 -QGDATMS--FFSAPKSRDQGYILNAQRSIRMVQELLSSDILDIINHMVRASAEARNRIL 431

Query:   405 GYLAALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKI---DLFKVDLMYPFHPN 461
              + AA +  N KR  +Q + +T++ DGFM NL      L       +  K+D +   + +
Sbjct:   432 DWFAAALNINHKRRAMQVDPATVSSDGFMFNLTTCLDHLCQPFMDANFTKIDRIDIEYLH 491

Query:   462 KSEMLSFKNDTRLKMSSQEVEDWLASLSSTAWREPKFSSTCWFLTLHCTHLSLLPALAKY 521
             ++  +  +++T++  + Q   D   +  S       F +  +FLT    H       +K 
Sbjct:   492 RNPRVDMRDETKIN-ADQHASDAFYAKKSEG--TSNFITEIFFLTAAAHHYGSESLTSKL 548

Query:   522 QRRVRSLRDLQKLVDELSSTEETWRGTVIARRNKDF-LKRWKHQIKKLSRSKACADAGLL 580
                 R L+ ++  + +L +    W       R  +  LKR+K ++      K      L 
Sbjct:   549 DTLERDLKHMETTLVKLEAERPKWSNYPAQLRLFEIQLKRFKDKLDMGLALKYSLQGVLF 608

Query:   581 DKNLMKKSAVFYMSVAEYLLRVMTGEE-NLCNITLPLPSTVRPEFAALPEWYVEDIAEFL 639
             D     +S  F   V  +LLRV +G+      + LPLP      F  LPE++V+DI    
Sbjct:   609 DDQWQFRSMTFMRYVVVWLLRVASGKNFPKEQLVLPLPEQPPEVFKCLPEYFVDDIVSNF 668

Query:   640 LFALQYIPGIEDVVE-DRCVTWLLVTM-CSPQMIKNPYLLAKLIEVLFISN-PDVQTRTS 696
              F +  +P I    + D  V   +  + CS + IKNPYL A L+ +L+    P     T 
Sbjct:   669 KFIMWCMPQIITATQGDELVMMCIAFLECS-EYIKNPYLKAGLVSILYRGTWPRPGGATG 727

Query:   697 NLYDRIMAHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHR 756
              L D + +  F++++L    M FY   E TG+ ++FYDKF IRY I  I+K +W + ++R
Sbjct:   728 VLVDLLNSMPFANEYLLHACMNFYIQAEHTGAHTQFYDKFNIRYEIFQIIKCVWPNTLYR 787

Query:   757 QAFINESKTG-NQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQ 815
                +N++K   + FV+FVN+L+ND T++LDES  S K I+ TQ  +R+E A +  PA +Q
Sbjct:   788 AKLLNQAKHHLDFFVQFVNLLLNDVTYVLDESFGSFKTIYNTQLELRNEGA-SMDPAVRQ 846

Query:   816 LSRERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLC 875
               +E ++A  +R  +SY+ L  ETV M    T  + + F  PE+V RL+ ML++NL  + 
Sbjct:   847 -EKEERVAQAQRSAKSYMQLTNETVAMLKLFTEALADSFTMPEIVQRLADMLDYNLDAMV 905

Query:   876 GPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHL-DCDEFAAAIAQDERSFRKELFDDAAD 934
             GPK ++L+V +  +YG+ PR LL+++VD+YL+L     F  A+A+D RS++   F+ AA+
Sbjct:   906 GPKSSNLRVENLHEYGFRPRALLSEIVDVYLNLMGKQNFIVAVARDGRSYKPANFEKAAE 965

Query:   935 RMERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLP 994
              + +  +  P  L ++  L  +  E   ++ + E D  + PDEF DPLM TLMEDPV LP
Sbjct:   966 ILRKWNLKSPEELKRWDQLQLKVKEAKESDDQAEEDLGEIPDEFLDPLMYTLMEDPVILP 1025

Query:   995 -SGVVMDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREKI 1044
              S + +DRS +  HLL+   DPF+R PL  +++ P+ +LK KIE +KR+KI
Sbjct:  1026 ASKISIDRSTLRAHLLSDPHDPFNRVPLKMEDVAPDTDLKAKIEEFKRQKI 1076


>UNIPROTKB|I3LQG8 [details] [associations]
            symbol:LOC100737278 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
            evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
            Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
            GeneTree:ENSGT00390000009300 EMBL:FP104527 EMBL:FP565389
            Ensembl:ENSSSCT00000024710 OMA:INECTHY Uniprot:I3LQG8
        Length = 289

 Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
 Identities = 173/284 (60%), Positives = 221/284 (77%)

Query:   760 INESKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSRE 819
             ++E  +G QFV+++NML+NDTTFLLDESLESLKRIHE QE M+++  +  +P +QQ +R+
Sbjct:     1 MDEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQ 60

Query:   820 RQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKC 879
              QLA DER  RSYL L  ETVDMFH LT ++++PFLRPEL  RL+AMLNFNLQQLCGPKC
Sbjct:    61 SQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKC 120

Query:   880 NHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDDAADRMERR 939
               LKV +P+KYG++P++LL+QL DIYL LDC  FA AIA D+RS+ KELF++   +M + 
Sbjct:   121 RDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKA 180

Query:   940 QILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSGVVM 999
              I    +++KF+ LA +  EI   N + E+DY+DAPDEFRDPLMDTLM DPV LPSG +M
Sbjct:   181 GIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIM 240

Query:  1000 DRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
             DRS+I+RHLLNS TDPF+RQ L E  L+P  ELK++I AW REK
Sbjct:   241 DRSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIHAWMREK 284


>SGD|S000002349 [details] [associations]
            symbol:UFD2 "Ubiquitin chain assembly factor (E4)"
            species:4932 "Saccharomyces cerevisiae" [GO:0034450
            "ubiquitin-ubiquitin ligase activity" evidence=IEA;IDA] [GO:0016567
            "protein ubiquitination" evidence=IEA;IDA] [GO:0030433
            "ER-associated protein catabolic process" evidence=IMP] [GO:0005737
            "cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA;IMP;IPI] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IEA] [GO:0000151
            "ubiquitin ligase complex" evidence=IEA] [GO:0006950 "response to
            stress" evidence=IMP] [GO:0016874 "ligase activity" evidence=IEA]
            InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
            SMART:SM00504 UniPathway:UPA00143 SGD:S000002349 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006950 EMBL:BK006938 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0030433 EMBL:X83276 GO:GO:0000151
            GO:GO:0034450 eggNOG:COG5113 PDB:3M63 PDBsum:3M63 PDB:3M62
            PDBsum:3M62 GeneTree:ENSGT00390000009300 KO:K10597 OMA:CFFLTLT
            OrthoDB:EOG4MPMZ8 EMBL:U22154 EMBL:Z74238 PIR:S58787
            RefSeq:NP_010091.2 PDB:2QIZ PDB:2QJ0 PDBsum:2QIZ PDBsum:2QJ0
            ProteinModelPortal:P54860 SMR:P54860 DIP:DIP-5925N IntAct:P54860
            MINT:MINT-680185 STRING:P54860 PaxDb:P54860 PeptideAtlas:P54860
            EnsemblFungi:YDL190C GeneID:851337 KEGG:sce:YDL190C CYGD:YDL190c
            HOGENOM:HOG000248797 EvolutionaryTrace:P54860 NextBio:968408
            Genevestigator:P54860 GermOnline:YDL190C Uniprot:P54860
        Length = 961

 Score = 734 (263.4 bits), Expect = 2.6e-86, Sum P(2) = 2.6e-86
 Identities = 169/452 (37%), Positives = 265/452 (58%)

Query:   605 GEENLCNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQY--IPGIEDVVEDRCVTWLL 662
             G EN+ N    L +     F   PE+ VE    + L+  +Y   P   +      V +  
Sbjct:   505 GVENVDNADF-LRAHAPVPFKYYPEFVVEGPVNYSLYISKYQTSPIFRNPRLGSFVEFTT 563

Query:   663 VTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRIMAH-KFSSQFLPSYLMKFYT 721
             + +  P+++ NP+L  KL+++L +    +   +      I  H +  ++ L   L+ FY 
Sbjct:   564 MVLRCPELVSNPHLKGKLVQLLSVGAMPLTDNSPGFMMDIFEHDELVNKNLLYALLDFYV 623

Query:   722 DVETTGSSSEFYDKFTIRYHISLILKGMW-ESPIHRQAFINESKTGNQF-VKFVNMLMND 779
              VE TGSSS+FYDKF  RY IS+IL+ ++ + P ++   I +S+    F V+FV  ++ND
Sbjct:   624 IVEKTGSSSQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQSQNNADFFVRFVARMLND 683

Query:   780 TTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQ--LAADERQCRSYLTLGR 837
              TFLLDE L +L  +H  Q  + D  A  A P  ++  +E Q  LA+  RQ +S   L  
Sbjct:   684 LTFLLDEGLSNLAEVHNIQNEL-DNRARGAPPTREEEDKELQTRLASASRQAKSSCGLAD 742

Query:   838 ETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHLKVSSPDKYGWDPRRL 897
             +++ +F   + +I   F+ PE+VYRL++MLN+NL+ L GPKC  LKV  P  Y ++P+ L
Sbjct:   743 KSMKLFEIYSKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDPQSYSFNPKDL 802

Query:   898 LNQLVDIYLHL-DCDEFAAAIAQDERSFRKELFDDAADRMERRQILL-PSSLDKFRALAS 955
             L  L  +Y++L +  EF +A+A+DERSF + LF  A D + R+  L  P  ++K    A+
Sbjct:   803 LKALTTVYINLSEQSEFISAVAKDERSFNRNLFVRAVDILGRKTGLASPEFIEKLLNFAN 862

Query:   956 RAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSGVV-MDRSVIVRHLLNSSTD 1014
             +A E   A+ +++++Y D PDEF DPLM T+M+DPV LP+  + +DRS I  HLL+ STD
Sbjct:   863 KAEEQRKADEEEDLEYGDVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTD 922

Query:  1015 PFSRQPLFEDNLKPNEELKKKIEAWKREKIEK 1046
             PF+R PL  +++ PNEEL++KI  +K++K E+
Sbjct:   923 PFNRMPLKLEDVTPNEELRQKILCFKKQKKEE 954

 Score = 149 (57.5 bits), Expect = 2.6e-86, Sum P(2) = 2.6e-86
 Identities = 76/299 (25%), Positives = 127/299 (42%)

Query:   339 LGPFFSISVFAEDDVKVGNHFFSSVTDLNNKS-IQATLQNGLQLTRGFLYRICHTMLRNN 397
             LGP  S+S   E  V + N+  + +      + I  +LQ   ++    L+ I   ++R +
Sbjct:   217 LGPILSLSPI-EAAVAIRNYGDNLLRSKQQTAMIHESLQAEHKVVIDRLFFIVDKLVRGS 275

Query:   398 -PTRETMLGYLAALVGHNEKRAQLQSEESTLAGDGFMLN---LLAVF-QALSD----KID 448
               +R  M+ Y A +   N  R         L+ +GFM N   LL  F Q   D    KID
Sbjct:   276 LNSRTDMISYFAHIANKNHLRRADHPPFKELSSNGFMSNITLLLVRFSQPFLDISYKKID 335

Query:   449 LFKVDLMYPFHPNKSEMLSFKNDTRLKMSSQEVEDWLASLSSTAWREPKFSSTCWFLTLH 508
               K+D  Y F+ N S  +    +TRL    +E + +      TA  +P F S C+FLTL 
Sbjct:   336 --KIDANY-FN-NPSLFIDLSGETRLNSDFKEADAFYDKNRKTADSKPNFISDCFFLTLT 391

Query:   509 CTHLSLLPALAKYQRRVRSLRDLQKLVDELSSTEETWRG-TVIARRNKDFLKRWKHQIKK 567
               H  L   L+ ++ ++ S  +++ L +E+   ++      V AR     L + +  +K 
Sbjct:   392 YLHYGLGGTLS-FEEKMGS--EIKALKEEIEKVKKIAANHDVFARFITAQLSKMEKALKT 448

Query:   568 LSRSKACADAGLLDKNLMKKSAVFYMSVAEYLLRVMTGEENLC--NITLPL-PSTVRPE 623
                 +         ++L  +   F    + +L+RV+  E       I LPL P  +  E
Sbjct:   449 TESLRFALQGFFAHRSLQLEVFDFICGASTFLIRVVDPEHEFPFKQIKLPLIPDQIGVE 507

 Score = 39 (18.8 bits), Expect = 1.0e-74, Sum P(2) = 1.0e-74
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query:   108 PQIIENTICKILSVTYSQVDASNTILYLPQVASVLTELKQ 147
             P  I +  C  L++TY       T+ +  ++ S +  LK+
Sbjct:   379 PNFISD--CFFLTLTYLHYGLGGTLSFEEKMGSEIKALKE 416


>CGD|CAL0003403 [details] [associations]
            symbol:orf19.5965 species:5476 "Candida albicans" [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
            [GO:0006950 "response to stress" evidence=IEA] [GO:0016567 "protein
            ubiquitination" evidence=IEA] [GO:0030433 "ER-associated protein
            catabolic process" evidence=IEA] InterPro:IPR003613
            InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
            CGD:CAL0003403 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0000151 EMBL:AACQ01000003 EMBL:AACQ01000004 GO:GO:0034450
            eggNOG:COG5113 KO:K10597 RefSeq:XP_723029.1 RefSeq:XP_723176.1
            ProteinModelPortal:Q5AND8 STRING:Q5AND8 GeneID:3635164
            GeneID:3635292 KEGG:cal:CaO19.13386 KEGG:cal:CaO19.5965
            Uniprot:Q5AND8
        Length = 1075

 Score = 699 (251.1 bits), Expect = 6.5e-85, Sum P(3) = 6.5e-85
 Identities = 157/437 (35%), Positives = 264/437 (60%)

Query:   619 TVRPE-FAALPEWYVEDIAEFLLFALQYI--PGIEDVVE-DRCVTWLLVTMCSPQMIKNP 674
             T  PE +   PE+ +E I  +  F+ ++I  P + +  + +  V +  + +  P++I NP
Sbjct:   622 TKTPEPWKYYPEFILEGIINYCKFSTRFIGCPLVSNENKLNIFVEFSTILLRCPELIGNP 681

Query:   675 YLLAKLIEVLFISNPDVQTRTSNLYDRIM-AHKFSSQFLPSYLMKFYTDVETTGSSSEFY 733
             ++ A L+E+LF+ +  +Q         I   ++     L   L+ FY  VE TG+SS+FY
Sbjct:   682 HMKANLVELLFMGSLPMQNGAPGFISNIFNGNQLVMDNLLYSLLDFYVMVEKTGASSQFY 741

Query:   734 DKFTIRYHISLILKGMWESPIHRQAFINESKTG-NQFVKFVNMLMNDTTFLLDESLESLK 792
             DKF  RY+IS+IL+ +W++P +R    + SK   + F++F+  ++NDTT+LLDE+   L 
Sbjct:   742 DKFNSRYYISVILEELWQNPRYRFQLTDYSKNNVDFFIRFIARMLNDTTYLLDETFNLLN 801

Query:   793 RIHE-TQELMRDEA---AYAAIPAEQQLSRERQLAADERQCRSYLTLGRETVDMFHYLTV 848
              IH+  QE+ + E+   A   +  +++L++   L  DER+ +SY+ L  +T+++F   T 
Sbjct:   802 SIHDYQQEIKKRESGGEANETMGTDEELAQN--LEEDERRVKSYMGLSNKTMELFKLFTK 859

Query:   849 EIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHL 908
             E+   F+ PE+V RL+ ML++NL  L GP+C++LKV+ P+KY ++P+++L+ L +IY+ L
Sbjct:   860 EVPRGFVLPEIVDRLAGMLDYNLSILVGPRCSNLKVAEPEKYQFEPKKILSDLCEIYVSL 919

Query:   909 DCD-EFAAAIAQDERSFRKELFDDAADRMERRQILLPSSLDKFRALASRAHEISVANIKK 967
                 EF  A+A+D RSF    F  A   +  +  +    ++     A++A +  +    +
Sbjct:   920 SAQPEFVIAVARDGRSFNIVYFQKAEKILTTKTFIKNEIINGLIEFANKAEKARLDEENE 979

Query:   968 EVDYNDAPDEFRDPLMDTLMEDPVTLPSG-VVMDRSVIVRHLLNSSTDPFSRQPLFEDNL 1026
             E++  + PDEF DPLM TLMEDPV LPS  V +DRS I  HLL+ STDPF+R PL  +++
Sbjct:   980 ELELGEIPDEFLDPLMFTLMEDPVILPSSRVSIDRSTIKAHLLSDSTDPFNRVPLKLEDV 1039

Query:  1027 KPNEELKKKIEAWKREK 1043
               + ELK+KI+ +K++K
Sbjct:  1040 IDDVELKQKIQDFKQQK 1056

 Score = 215 (80.7 bits), Expect = 6.5e-85, Sum P(3) = 6.5e-85
 Identities = 117/531 (22%), Positives = 235/531 (44%)

Query:   120 SVTYSQVDASNTILYLPQVASVLTELKQNSVTITYQDLISQSLVE-LQDILLSKNNTCVL 178
             + T    D+S  +++LP +A    EL  ++V +  +D I    +E L ++ + K     +
Sbjct:   101 ATTTKSSDSSKGLIFLPNLAY---ELSDSNVKLN-EDHIESIFMEILTELGVPKQYKTPM 156

Query:   179 GHYTASYARVFEEERNNPKKCSIFPFKDVLYEVRTQLVRHSILVLQSTNSDPMSSPLVKP 238
              +    Y   F+ +R    K S+F ++D +  +  +++  S++      S  M    V  
Sbjct:   157 EYLYTVYHNAFKTKRTLAVK-SLF-YEDKV-AILNKII--SLVAAYGNMSFQMPDMFVNN 211

Query:   239 LINQTLP---------NGFLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADPDYS 289
              + ++L          + FLSD +    E EE+  ++++     +   + +A++ + +Y 
Sbjct:   212 DLRKSLDLFIDRFGDLSSFLSDIIQVSIE-EESLLELLNLFFPYLSARLYQANLNERNYL 270

Query:   290 KPLEALTDLLEIRIGSNVWPVCSALVSQVQ-FQPELNTKAVGREIAVTSYLGPFFSISVF 348
               +     L+ I+      PV +A+ SQ++ FQP   TKA+  E    + LGP   IS  
Sbjct:   271 NYISVFQFLVSIK------PV-AAIFSQIKGFQPPDKTKALDYEHK--TLLGPLLRISPL 321

Query:   349 AEDDVKVGNHFF----SSVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNP-TRETM 403
              ++   + + +F    +S++ +   ++  ++Q   ++    L+ I   ++R +  TRE +
Sbjct:   322 LDN---MASFYFGQETNSMSPVQINNLYGSMQTEYKVIIDHLFVIIDKLIRGSTKTREDL 378

Query:   404 LGYLAALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALS----D-----KIDLFKVDL 454
             L +L  L+  +  R    ++   LA DG M N+  VF  LS    D     KID  K+D+
Sbjct:   379 LQWLGNLINLSHLRRGSHADFKKLASDGIMYNISVVFIRLSLPFLDYPTFGKID--KIDV 436

Query:   455 MYPFHPNKSEMLSFKNDTRLKMSSQEVEDWLASL---SS----TAWREPKFSSTCWFLTL 507
              Y F   KS+++  K ++R+  + +E  ++ A     SS    T    P F S C+ LTL
Sbjct:   437 DYFF---KSDLIDIKEESRVNSTIEESNEYYAKRKQESSSDNLTPTPPPNFISDCFNLTL 493

Query:   508 HCTHLSLLPALAKYQRRVRSLRDLQKLVDELSSTEET-WRGTVIARRNKDFLKRWKHQIK 566
                H  +     KY R  R L  +++ ++ + S         ++ +  +  L   K+ I 
Sbjct:   494 AYLHYGVGGIFVKYDRVKRQLDQMEQRLEAIESEHPIPGMNPMMQQLMRRELPNLKNAII 553

Query:   567 KLSRSKACADAGLLDKNLMKKSAVFYMSVAEYLLRVMTGEENLCNITLPLP 617
              +   +    A   D++   +   F +    ++ R++  +     + L +P
Sbjct:   554 NMRAQRHVIKAIFDDRDHQLEIFDFVVGATTFITRLIDPQHKYPQVKLSIP 604

 Score = 39 (18.8 bits), Expect = 6.5e-85, Sum P(3) = 6.5e-85
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query:     7 DEIRQRRLAKL 17
             D++R +RLAKL
Sbjct:     5 DDVRAKRLAKL 15


>UNIPROTKB|Q14139 [details] [associations]
            symbol:UBE4A "Ubiquitin conjugation factor E4 A"
            species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0000209 "protein polyubiquitination"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0034450
            "ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] InterPro:IPR003613
            InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
            GO:GO:0005737 Reactome:REACT_6900 EMBL:CH471065 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0000209 GO:GO:0000151
            GO:GO:0034450 eggNOG:COG5113 CTD:9354 HOGENOM:HOG000007049
            HOVERGEN:HBG059871 KO:K10596 OMA:DRDAGEK EMBL:D50916 EMBL:EF445042
            EMBL:BC052643 EMBL:BC062695 EMBL:BC111417 EMBL:BC112367
            IPI:IPI00028957 IPI:IPI00556075 RefSeq:NP_001191006.1
            RefSeq:NP_004779.2 UniGene:Hs.602967 UniGene:Hs.75275 PDB:1WGM
            PDBsum:1WGM ProteinModelPortal:Q14139 SMR:Q14139 IntAct:Q14139
            STRING:Q14139 PhosphoSite:Q14139 DMDM:71164791 PaxDb:Q14139
            PRIDE:Q14139 Ensembl:ENST00000252108 Ensembl:ENST00000431736
            GeneID:9354 KEGG:hsa:9354 UCSC:uc001psv.3 UCSC:uc001psw.3
            GeneCards:GC11P118264 HGNC:HGNC:12499 MIM:603753 neXtProt:NX_Q14139
            PharmGKB:PA37147 InParanoid:Q14139 ChiTaRS:UBE4A
            EvolutionaryTrace:Q14139 GenomeRNAi:9354 NextBio:35029
            PMAP-CutDB:B0YJB6 ArrayExpress:Q14139 Bgee:Q14139 CleanEx:HS_UBE4A
            Genevestigator:Q14139 GermOnline:ENSG00000110344 Uniprot:Q14139
        Length = 1066

 Score = 683 (245.5 bits), Expect = 1.4e-64, P = 1.4e-64
 Identities = 226/834 (27%), Positives = 386/834 (46%)

Query:   248 FLSDFVCTLYEDEE--TFKQVMSPILQGVYKAMTEASIADPDYSKPLEALTDLLEIRIGS 305
             FL + +  L  DEE  TF +VM P+   +   + +  +        L A  D+L      
Sbjct:   248 FLEEVIEALILDEEVRTFPEVMIPVFDILLGRIKDLELCQI----LLYAYLDILLYFTRQ 303

Query:   306 NVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFAEDDVKVGNH-FFSSVT 364
                 +    V  +Q +   N +   + +     LG   SIS   +    V NH +F + +
Sbjct:   304 K--DMAKVFVEYIQPKDPTNGQMYQKTL-----LGVILSISCLLKTPGVVENHGYFLNPS 356

Query:   365 DLNNKSIQATLQNGLQLTRGF---LYRICHTMLRNNP-TRETMLGYLAALVGHNEKRAQL 420
               + + I+    N  Q    F   +Y++   +L+ +P T+  +L +L   +  N  R ++
Sbjct:   357 RSSPQEIKVQEANIHQFMAQFHEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKI 416

Query:   421 QSEE------STLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLSFKNDTRL 474
              + +         A D F LNL A    L       +   +  F+P    +    ND   
Sbjct:   417 WANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSSRLLTFNPTYCALKEL-NDEER 475

Query:   475 KMSSQEVEDW-LASLSSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRRVRSLRD-LQ 532
             K+ +  +      +    A +EPKF      +T +   L+       + R    L D + 
Sbjct:   476 KIKNVHMRGLDKETCLIPAVQEPKFPQNYNLVTENLA-LTEYTLYLGFHR----LHDQMV 530

Query:   533 KLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNLMKKSAVFY 592
             K+   L   +  WR     + +       + Q ++L          + +  +++      
Sbjct:   531 KINQNLHRLQVAWRDA--QQSSSPAADNLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQ 588

Query:   593 MSVAEYLLRVMTGEENL--CNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQYIPGIE 650
             +S+A  L+++  G E      +T PLP       A +PE++ +++ +FL+F  ++   I 
Sbjct:   589 VSMAVLLVQLAIGNEGSQPIELTFPLPDGYS-SLAYVPEFFADNLGDFLIFLRRFADDIL 647

Query:   651 DVVED---RCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRIMAHK- 706
             +   D     + ++ +   S + +KNP+L AKL EVL    P +    + L   +   K 
Sbjct:   648 ETSADSLEHVLHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPNPLVSSVFHRKR 707

Query:   707 -FSS-QFLPSY---LMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFIN 761
              F + Q+ P     L+K + D+E TG   +F  KF  R  +  IL+ MW +  +R++  +
Sbjct:   708 VFCNFQYAPQLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDTYRESIKD 767

Query:   762 ---------ESKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPA 812
                      E+     F++F+N+LMND  FLLDE+++ L +I + Q++ +D   + ++  
Sbjct:   768 LADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKI-KIQQIEKDRGEWDSLTP 826

Query:   813 EQQLSRERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQ 872
             E +  +E  L    +  R +  +  ET+    +LT EIK  F+ P L  R+ +MLN+ LQ
Sbjct:   827 EARREKEAGLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQ 886

Query:   873 QLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHL-DCDEFAAAIAQDERSFRKELFDD 931
              L GPK   LKV    ++ + P++L++ +  IYL+L D + F A + +D RS+   LF  
Sbjct:   887 HLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQ 946

Query:   932 AADRMERRQILLPSSLDK-FRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDP 990
                 +++  I  P ++   F  LA R   ++    ++E  Y DA DEF DP+M TLM DP
Sbjct:   947 TVRVLKK--INKPGNMIMAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMCDP 1004

Query:   991 VTLPSG-VVMDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
             V LPS  V +DRS I RHLL+  TDPF+R PL  D ++PN ELK+KI+ W  E+
Sbjct:  1005 VVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAER 1058


>UNIPROTKB|A5PKG6 [details] [associations]
            symbol:UBE4A "Ubiquitin conjugation factor E4 A"
            species:9913 "Bos taurus" [GO:0034450 "ubiquitin-ubiquitin ligase
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
            SMART:SM00504 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450
            eggNOG:COG5113 EMBL:BC142480 IPI:IPI00854465 RefSeq:NP_001092469.1
            UniGene:Bt.103454 ProteinModelPortal:A5PKG6 SMR:A5PKG6
            STRING:A5PKG6 PRIDE:A5PKG6 Ensembl:ENSBTAT00000026289 GeneID:517544
            KEGG:bta:517544 CTD:9354 GeneTree:ENSGT00390000009300
            HOGENOM:HOG000007049 HOVERGEN:HBG059871 InParanoid:A5PKG6 KO:K10596
            OMA:DRDAGEK OrthoDB:EOG4CRKZ8 NextBio:20872466 Uniprot:A5PKG6
        Length = 1067

 Score = 683 (245.5 bits), Expect = 1.4e-64, P = 1.4e-64
 Identities = 233/873 (26%), Positives = 405/873 (46%)

Query:   212 RTQLVRHSILVLQSTNSDPMSSPLVKPLINQTLPN--GFLSDFVCTLYEDEE--TFKQVM 267
             RT L+   I V Q+ + + +   +V+ ++     +   FL + +  L  DEE  TF +VM
Sbjct:   211 RTVLLTPEIYVDQNIH-EQLVDLMVEAILGGHFESVAEFLDEVIEALILDEEVRTFPEVM 269

Query:   268 SPILQGVYKAMTEASIADPDYSKPLEALTDLLEIRIG-SNVWPVCSALVSQVQFQPELNT 326
              P+       +  + I D +  + L  L   L+I +  +    +    V  +Q +   N 
Sbjct:   270 IPVFD-----ILSSRIKDLELCQIL--LYAYLDILLYFTKQKDMAKVFVDYIQPKDPSNG 322

Query:   327 KAVGREIAVTSYLGPFFSISVFAEDDVKVGNH-FFSSVTDLNNKSIQATLQNGLQLTRGF 385
             +   + +     LG   +IS   +    + NH +F + +  + + I+    N  Q    +
Sbjct:   323 QMYQKTL-----LGVILNISCLLKTPGVIENHGYFLNPSRSSPQEIKVQEANIHQFMARY 377

Query:   386 ---LYRICHTMLRNNP-TRETMLGYLAALVGHNEKRAQLQSEE------STLAGDGFMLN 435
                +Y++   +L+ +P T+  +L +L   +  N  R ++ + +         A D F LN
Sbjct:   378 HEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKIWANQMPEIFFQMYASDAFFLN 437

Query:   436 LLAVFQALSDKIDLFKVDLMYPFHPNKSEMLSFKNDTRLKMSSQEVEDW-LASLSSTAWR 494
             L A    L       +   +  F+P    +    ND   K+ +  +      +    A +
Sbjct:   438 LGAALLKLCQPFCKPRSSRLLTFNPTYCALKEL-NDEERKIKNVHMRGLDKETCLIPAVQ 496

Query:   495 EPKFSSTCWFLTLHCTHLSLLPALAKYQRRVRSLRD-LQKLVDELSSTEETWRGTVIARR 553
             EPKF      +T +   L+       + R    L D + K+   L   +  WR     + 
Sbjct:   497 EPKFPQNYNLVTENLV-LTEYTLYLGFHR----LHDQMVKINQNLHRLQVAWRDA--QQS 549

Query:   554 NKDFLKRWKHQIKKLSRSKACADAGLLDKNLMKKSAVFYMSVAEYLLRVMTGEEN--LCN 611
             +       + Q ++L          + +  +++      +S+A  L+++  G E   L  
Sbjct:   550 SSPAADNLREQFERLMTVYLSTKTAMTEPQMLQNCLNLQVSMAVLLVQLAIGNEGSQLME 609

Query:   612 ITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQYIPGIEDVVED---RCVTWLLVTMCSP 668
             +T PLP       A +PE++ +++ +FL+F  ++   I +   D     + ++ +   S 
Sbjct:   610 LTFPLPDGYS-SLAYVPEFFADNLGDFLIFLRRFADDILETSADSLEHVLHFITIFTGSI 668

Query:   669 QMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRIMAHK-----FS-SQFLPSYLMKFYTD 722
             + +KNP+L AKL EVL    P +    + L   +   K     F  +  L   L+K + D
Sbjct:   669 ERMKNPHLRAKLAEVLEAVMPHMDQTPNPLVSSVFHRKRVFCNFPYASHLAEALIKVFVD 728

Query:   723 VETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFIN---------ESKTGNQFVKFV 773
             +E TG   +F  KF  R  +  ILK MW +  +R++  +         E+     F++F+
Sbjct:   729 IEFTGDPHQFEQKFNYRRPMYPILKYMWGTDTYRESIKDLADYASKNLEAMNPPLFLRFL 788

Query:   774 NMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQLAADERQCRSYL 833
             N+LMND  FLLDE+++ L +I + Q++ +D   +  +  E +  +E  L    +  R + 
Sbjct:   789 NLLMNDAIFLLDEAIQYLSKI-KIQQIEKDRGEWDNLTPEARREKEAGLQMFGQLARFHN 847

Query:   834 TLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHLKVSSPDKYGWD 893
              +  ET+    +LT EIK  F+ P L  R+ +MLN+ LQ L GPK   LKV    ++ + 
Sbjct:   848 IMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFK 907

Query:   894 PRRLLNQLVDIYLHL-DCDEFAAAIAQDERSFRKELFDDAADRMERRQILLPSSLD-KFR 951
             P++L++ +  IYL+L D + F A + +D RS+   LF      +++  I  P ++   F 
Sbjct:   908 PQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKK--INKPGNMIVAFS 965

Query:   952 ALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSG-VVMDRSVIVRHLLN 1010
              LA R   ++    ++E  Y DA DEF DP+M TLM DPV LPS  V +DRS I RHLL+
Sbjct:   966 NLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVTVDRSTIARHLLS 1025

Query:  1011 SSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
               TDPF+R PL  D ++PN ELK+KI+ W  E+
Sbjct:  1026 DQTDPFNRSPLTMDQIRPNTELKEKIQRWLAER 1058


>UNIPROTKB|F1M9N5 [details] [associations]
            symbol:Ube4a "Ubiquitin conjugation factor E4 A"
            species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
            complex" evidence=IEA] [GO:0000209 "protein polyubiquitination"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
            InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
            SMART:SM00504 RGD:1303173 GO:GO:0005737 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0000209 GO:GO:0000151
            GO:GO:0034450 GeneTree:ENSGT00390000009300 IPI:IPI00369411
            PRIDE:F1M9N5 Ensembl:ENSRNOT00000021321 ArrayExpress:F1M9N5
            Uniprot:F1M9N5
        Length = 1066

 Score = 671 (241.3 bits), Expect = 8.8e-63, Sum P(2) = 8.8e-63
 Identities = 227/834 (27%), Positives = 386/834 (46%)

Query:   248 FLSDFVCTLYEDEE--TFKQVMSPILQGVYKAMTEASIADPDYSKPLEALTDLLEIRIGS 305
             FL + +  L  DEE  TF +VM P+   +   + +  +        L A  D+L      
Sbjct:   248 FLEEVIEALLLDEEVRTFPEVMIPVFDILLGRIKDLELCQI----LLYAYLDILLYFTRQ 303

Query:   306 NVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFAEDDVKVGNH-FFSSVT 364
                 +    +  +Q +   N +   + +     LG   +IS   +    V NH FF + +
Sbjct:   304 K--DMAKVFLEYIQPKDPSNGQMYQKTL-----LGVILNISCLLKTPGVVENHGFFLNPS 356

Query:   365 DLNNKSIQATLQNGLQLTRGF---LYRICHTMLRNNP-TRETMLGYLAALVGHNEKRAQL 420
               + + I+    N  Q    F   +Y++   +L+ +P T+  +L +L   +  N  R ++
Sbjct:   357 RSSPQEIKVQEANIHQFMAQFHEKIYQMLKNLLQLSPETKHGILFWLGNCLHANAGRTKI 416

Query:   421 QSEE------STLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLSFKNDTRL 474
              + +         A D F LNL A    L       +   +  F+P    +L   ND   
Sbjct:   417 WANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSSRLLTFNPTYC-VLKDLNDEER 475

Query:   475 KMSSQEVEDW-LASLSSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRRVRSLRD-LQ 532
             K+ S  +      +    A +EP F  +   +T +   L+       + R    L D + 
Sbjct:   476 KIKSVHMRGLDKETCLIPAVQEPVFPQSYNLVTENLA-LTEYTLYLGFHR----LHDQMV 530

Query:   533 KLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNLMKKSAVFY 592
             K+   L   +  WR     + +       + Q ++L          + +  +++      
Sbjct:   531 KINQNLHRLQVAWRDA--QQSSSPAADNLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQ 588

Query:   593 MSVAEYLLRVMTGEENLCNITL--PLPSTVRPEFAALPEWYVEDIAEFLLFALQYIPGIE 650
             +S+A  L+++  G E    I L  PLP       A +PE++ +++ +FL+F  ++   I 
Sbjct:   589 VSMAVLLVQLAIGNEGSQPIELSFPLPDGYS-SLAYVPEFFADNLGDFLIFLRRFAEDIL 647

Query:   651 DVVED---RCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRIMAHK- 706
             +   D     + ++ +   S + +KNP+L AKL EVL    P +    S L   +   K 
Sbjct:   648 ETSADSLEHVLHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPSPLVSSVFHRKR 707

Query:   707 -FSS-QFLPSY---LMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFIN 761
              F +  + P     L+K + D+E TG   +F  KF  R  +  IL+ MW +  +R++  +
Sbjct:   708 VFCNFPYAPQLSEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDSYRESIKD 767

Query:   762 ---------ESKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPA 812
                      E+     F++F+N+LMND  FLLDE+++ L +I + Q++ +D   + ++  
Sbjct:   768 LADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKI-KIQQIEKDRGEWESLTP 826

Query:   813 EQQLSRERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQ 872
             E +  +E  L    +  R +  +  ET+    +LT EIK  F+ P L  R+ +MLN+ LQ
Sbjct:   827 EARREKEAGLQMFGQLARFHNIMSNETIGTLSFLTSEIKSLFVHPFLAERIISMLNYFLQ 886

Query:   873 QLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHL-DCDEFAAAIAQDERSFRKELFDD 931
              L GPK   LKV    ++ + P++L++ +  IYL+L D + F A + +D RS+   LF  
Sbjct:   887 HLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQ 946

Query:   932 AADRMERRQILLPSSLD-KFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDP 990
                 +++  I  P ++   F  LA R   ++    ++E  Y DA DEF DP+M TLM DP
Sbjct:   947 TVRVLKK--INKPGNMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDP 1004

Query:   991 VTLPSG-VVMDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
             V LPS  V +DRS I RHLL+  TDPF+R PL  D ++PN ELK+KI+ W  E+
Sbjct:  1005 VVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAER 1058

 Score = 40 (19.1 bits), Expect = 8.8e-63, Sum P(2) = 8.8e-63
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query:    45 PSGRDDMIGSIGQKVNLGTSPMEIDKSVIKISEKPQAHGEPME 87
             P+  DD   S+ + ++      E D SV +IS   + H E  E
Sbjct:    44 PASPDDSDNSVSESLD------EFDYSVSEISRSFRTHQEMCE 80


>RGD|1303173 [details] [associations]
            symbol:Ube4a "ubiquitination factor E4A" species:10116 "Rattus
            norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
            ligase activity" evidence=IEA;ISO] InterPro:IPR003613
            InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
            RGD:1303173 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450
            eggNOG:COG5113 CTD:9354 HOVERGEN:HBG059871 KO:K10596
            OrthoDB:EOG4CRKZ8 EMBL:BC061761 IPI:IPI00369411 RefSeq:NP_997493.1
            UniGene:Rn.102204 ProteinModelPortal:Q6P7A2 SMR:Q6P7A2
            STRING:Q6P7A2 PRIDE:Q6P7A2 GeneID:315608 KEGG:rno:315608
            UCSC:RGD:1303173 InParanoid:Q6P7A2 NextBio:669506
            ArrayExpress:Q6P7A2 Genevestigator:Q6P7A2
            GermOnline:ENSRNOG00000026833 Uniprot:Q6P7A2
        Length = 1066

 Score = 664 (238.8 bits), Expect = 6.2e-62, Sum P(2) = 6.2e-62
 Identities = 226/834 (27%), Positives = 385/834 (46%)

Query:   248 FLSDFVCTLYEDEE--TFKQVMSPILQGVYKAMTEASIADPDYSKPLEALTDLLEIRIGS 305
             FL + +  L  DEE  TF +VM P+   +   + +  +        L A  D+L      
Sbjct:   248 FLEEVIEALLLDEEVRTFPEVMIPVFDILLGRIKDLELCQI----LLYAYLDILLYFTRQ 303

Query:   306 NVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFAEDDVKVGNH-FFSSVT 364
                 +    +  +Q +   N +   + +     LG   +IS   +    V NH FF + +
Sbjct:   304 K--DMAKVFLEYIQPKDPSNGQMYQKTL-----LGVILNISCLLKTPGVVENHGFFLNPS 356

Query:   365 DLNNKSIQATLQNGLQLTRGF---LYRICHTMLRNNP-TRETMLGYLAALVGHNEKRAQL 420
               + + I+    N  Q    F   +Y++   +L+ +P T+  +L +L   +  N  R ++
Sbjct:   357 RSSPQEIKVQEANIHQFMAQFHEKIYQMLKNLLQLSPETKHGILFWLGNCLHANAGRTKI 416

Query:   421 QSEE------STLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLSFKNDTRL 474
              + +         A D F LNL A    L       +   +  F+P    +L   ND   
Sbjct:   417 WANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSSRLLTFNPTYC-VLKDLNDEER 475

Query:   475 KMSSQEVEDW-LASLSSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRRVRSLRD-LQ 532
             K+ S  +      +    A +EP F  +   +T +   L+       + R    L D + 
Sbjct:   476 KIKSVHMRGLDKETCLIPAVQEPVFPQSYNLVTENLA-LTEYTLYLGFHR----LHDQMV 530

Query:   533 KLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNLMKKSAVFY 592
             K+   L   +  WR     + +       + Q ++L          + +  +++      
Sbjct:   531 KINQNLHRLQVAWRDA--QQSSSPAADNLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQ 588

Query:   593 MSVAEYLLRVMTGEENLCNITL--PLPSTVRPEFAALPEWYVEDIAEFLLFALQYIPGIE 650
             +S+A  L+++  G E    I L  PLP       A +PE++ +++ +FL+F  ++   I 
Sbjct:   589 VSMAVLLVQLAIGNEGSQPIELSFPLPDGYS-SLAYVPEFFADNLGDFLIFLRRFAEDIL 647

Query:   651 DVVED---RCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRIMAHK- 706
             +   D     + ++ +   S + +KNP+L AKL EVL    P +    S L   +   K 
Sbjct:   648 ETSADSLEHVLHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPSPLVSSVFHRKR 707

Query:   707 -FSS-QFLPSY---LMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFIN 761
              F +  + P     L+K + D+E TG   +F  KF  R  +  IL+ MW +  +R++  +
Sbjct:   708 VFCNFPYAPQLSEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDSYRESIKD 767

Query:   762 ---------ESKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPA 812
                      E+     F++F+N+LMND  FLLDE+++ L +I + Q++ +D   + ++  
Sbjct:   768 LADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKI-KIQQIEKDRGEWESLTP 826

Query:   813 EQQLSRERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQ 872
             E +  +E  L    +  R +  +  ET+    +LT EIK  F+ P L  R+ +MLN+ LQ
Sbjct:   827 EARREKEAGLQMFGQLARFHNIMSNETIGTLSFLTSEIKSLFVHPFLAERIISMLNYFLQ 886

Query:   873 QLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHL-DCDEFAAAIAQDERSFRKELFDD 931
              L GPK   LKV    ++ + P++L++ +  IYL+L D + F A + +D RS+   LF  
Sbjct:   887 HLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQ 946

Query:   932 AADRMERRQILLPSSLD-KFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDP 990
                 +++  I  P ++   F  LA R   ++    ++E  Y DA DEF DP+M TLM DP
Sbjct:   947 TVRVLKK--INKPGNMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDP 1004

Query:   991 VTLPSG-VVMDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
             V LPS  V +D S I RHLL+  TDPF+R PL  D ++PN ELK+KI+ W  E+
Sbjct:  1005 VVLPSSRVTVDGSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAER 1058

 Score = 40 (19.1 bits), Expect = 6.2e-62, Sum P(2) = 6.2e-62
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query:    45 PSGRDDMIGSIGQKVNLGTSPMEIDKSVIKISEKPQAHGEPME 87
             P+  DD   S+ + ++      E D SV +IS   + H E  E
Sbjct:    44 PASPDDSDNSVSESLD------EFDYSVSEISRSFRTHQEMCE 80


>FB|FBgn0028467 [details] [associations]
            symbol:CG11070 species:7227 "Drosophila melanogaster"
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
            evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0016567 "protein ubiquitination" evidence=IEA]
            InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
            SMART:SM00504 EMBL:AE014134 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0000151 GO:GO:0034450 eggNOG:COG5113
            GeneTree:ENSGT00390000009300 KO:K10596 OMA:DRDAGEK EMBL:AF181657
            RefSeq:NP_609060.1 UniGene:Dm.331 SMR:Q9U4F8
            EnsemblMetazoa:FBtr0079297 GeneID:33932 KEGG:dme:Dmel_CG11070
            UCSC:CG11070-RA FlyBase:FBgn0028467 InParanoid:Q9U4F8
            OrthoDB:EOG495X6S GenomeRNAi:33932 NextBio:785986 Uniprot:Q9U4F8
        Length = 993

 Score = 570 (205.7 bits), Expect = 8.8e-62, Sum P(3) = 8.8e-62
 Identities = 153/455 (33%), Positives = 245/455 (53%)

Query:   617 PSTVRPEFAALPEWYVEDIAEFL-----LFALQYIPGIEDVVEDRCVTWLLVTMCSPQMI 671
             P  V P   ++PE  +++I+ FL     L   QYI  I     D     +++ M S  ++
Sbjct:   545 PPFVAPYMQSVPESIIDNISAFLNAARKLNGEQYI-NIYFSAHDAFFKMIILFMGSSALV 603

Query:   672 KNPYLLAKLIEVL-FISNPDV-----QTRTSNLYDRIMAHKFSSQFLPSYLMKFYTDVET 725
             KNP+L AKL E L F+    +     +T  S+++D    H    + + S L+  +  +E 
Sbjct:   604 KNPHLRAKLAEALEFLLPSRIMGSHRKTFVSHVFDN---HPDRLKVVRS-LLNVFVSIEM 659

Query:   726 TGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFINESKTGNQ---------FVKFVNML 776
             TG S +F  KF  R  +  I++ +W  P H Q F + +    Q         F++F+N+L
Sbjct:   660 TGQSVQFEQKFNYRRPMYAIMEFLWTKPEHVQCFRDLAVEAEQNMDAIEPPIFLRFINLL 719

Query:   777 MNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQLAADERQCRSYLTLG 836
             +ND  FLLDESL +L++I + Q+  +D   + ++P  ++      L       R    +G
Sbjct:   720 INDAIFLLDESLSNLEQIKQLQQA-QDNGEWESLPHTEREQHMTNLQHLGMLARFDNIIG 778

Query:   837 RETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHLKVSSPDKYGWDPRR 896
             R+T+++   LT +IK  F    +V R++AMLN+ L  L GPK    KV    ++ +DP +
Sbjct:   779 RDTINLLKLLTSKIKSIFCHNSMVDRMAAMLNYFLLNLVGPKKERFKVKDKKEFEFDPAQ 838

Query:   897 LLNQLVDIYLHLDCDE-FAAAIAQDERSFRKELFDDAAD---RMERRQILLPSSLDKFRA 952
              + ++  IY++L  DE F  A++QD RS+ ++LF  A +   R+   Q++    + +F  
Sbjct:   839 TVIEISHIYINLSSDESFCLAVSQDGRSYSEQLFSYAENILIRIGGGQLI--GDMSEFAV 896

Query:   953 LASRAHEISVANIKKEVDY-NDAPDEFRDPLMDTLMEDPVTLPSG-VVMDRSVIVRHLLN 1010
               +R      A  K+E +   DAP+E+ DP++ TLM DPV LPS  V +DRS I RHLL+
Sbjct:   897 KVARMG----AQYKEEQELLADAPEEYLDPIISTLMTDPVVLPSSKVTVDRSTIARHLLS 952

Query:  1011 SSTDPFSRQPLFEDNLKPNEELKKKIEAWKREKIE 1045
               TDPF+R+PL  D +K NE LK++IE+W + K E
Sbjct:   953 DQTDPFNREPLTMDKVKSNEALKQEIESWIQGKRE 987

 Score = 141 (54.7 bits), Expect = 8.8e-62, Sum P(3) = 8.8e-62
 Identities = 100/399 (25%), Positives = 174/399 (43%)

Query:   325 NTKAVGREIAVTSYLGPFFSISVFAEDDVKVGNHFFSSVTDLN--NKSIQATLQNGLQLT 382
             N +A G E   T  LG    IS+  +   + G + F     +N  ++++ A L +  Q  
Sbjct:   238 NPRASGSEYMDT-LLGSLLCISILPK--TQTGKYEFFQELSINQTDEALWALLSHHQQSI 294

Query:   383 RGFLYRICHTMLRNNPTRETMLGYLAALVGHNEKRAQLQSE-----ESTL---AGDGFML 434
               FL  +   ++ +  T++  L ++   +  N  R  L S      E T    + D FM 
Sbjct:   295 --FLL-VKQLLVLSPETKKKTLQWVGNCLDANVPRGHLWSSINASLEQTAHSTSSDAFMT 351

Query:   435 NLLAVFQALSDKIDL--FKVDLMYPFH---PNKSE------MLSFKNDTRLKMSSQEVED 483
             NL AV   L   + +   KV L+ P +   PNK        ML    +T L ++S+E E+
Sbjct:   352 NLTAVLVRLCAPLCMPSLKVLLVDPTYCAVPNKDRQAKGVSMLRAHAETCL-LTSEEGEE 410

Query:   484 WLASLSSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRRVRSLRDLQKLVDELSSTEE 543
              L     TA  +  F +  +++T  C  LS +P + ++ R +R L++ Q    E+ +++ 
Sbjct:   411 RL-----TA-EKYNFVTEIFYMTHKCFELSNIPCIERFVRVLRELQNTQMAYGEIVNSDP 464

Query:   544 TWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNLMK---KSAVFYMSVA---- 596
                 + +A   K+  +  + QI+++   K        D  L+K    SA++   +A    
Sbjct:   465 N---SEVA---KNLFRMIRDQIQQVLTIKNTLAEPTNDMYLLKFFEASAIWLTEIAMLPR 518

Query:   597 EYLLRVMT----GEENLCNITL--PLPSTVRPEFAALPEWYVEDIAEFL-----LFALQY 645
             E   + +       +   N+ L    P  V P   ++PE  +++I+ FL     L   QY
Sbjct:   519 EIYEQCLDKRDFSPQVFRNMELLSDTPPFVAPYMQSVPESIIDNISAFLNAARKLNGEQY 578

Query:   646 IPGIEDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVL 684
             I  I     D     +++ M S  ++KNP+L AKL E L
Sbjct:   579 I-NIYFSAHDAFFKMIILFMGSSALVKNPHLRAKLAEAL 616

 Score = 42 (19.8 bits), Expect = 8.8e-62, Sum P(3) = 8.8e-62
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query:   221 LVLQSTNSDPMSSPLVKPLINQTLPNGFLSDFVCTLYEDEETFKQVMS 268
             L+ +  NSD +   LV+ ++  TL     S  +C      ET ++++S
Sbjct:    12 LLQEGANSDGVPHKLVEEVLLFTLNKASSSAVLCLADVVVETSEEMLS 59

 Score = 37 (18.1 bits), Expect = 2.9e-61, Sum P(3) = 2.9e-61
 Identities = 6/24 (25%), Positives = 15/24 (62%)

Query:   158 ISQSLVELQDILLSKNNTCVLGHY 181
             + +++ +L  I + KN   +LG++
Sbjct:   195 LQKNIAKLNLITMKKNTFWILGYF 218


>UNIPROTKB|F1NIK2 [details] [associations]
            symbol:CBL "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
            evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
            Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
            GeneTree:ENSGT00390000009300 EMBL:AADN02041816 EMBL:AADN02041817
            EMBL:AADN02041818 EMBL:AADN02041819 EMBL:AADN02041820
            EMBL:AADN02041821 EMBL:AADN02041822 EMBL:AADN02041823
            EMBL:AADN02041824 EMBL:AADN02041825 EMBL:AADN02041826
            EMBL:AADN02041827 EMBL:AADN02041828 EMBL:AADN02041829
            EMBL:AADN02041830 EMBL:AADN02041831 EMBL:AADN02041832
            EMBL:AADN02041833 IPI:IPI00679951 Ensembl:ENSGALT00000011196
            ArrayExpress:F1NIK2 Uniprot:F1NIK2
        Length = 1072

 Score = 439 (159.6 bits), Expect = 1.3e-56, Sum P(2) = 1.3e-56
 Identities = 171/699 (24%), Positives = 311/699 (44%)

Query:   248 FLSDFVCTLYEDEE--TFKQVMSPILQGVYKAMTEASIADPDYSKPLEALTDLLEIRIGS 305
             FL + +  L  DEE  TF +VM P+       +  + I D D  + L   T L  I   +
Sbjct:   249 FLEEVIEALTMDEEVRTFGEVMVPVFD-----ILLSRIKDLDLCQIL-LYTYLDMILYFT 302

Query:   306 NVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFAEDDVKVGNH-FFSSVT 364
                 +       +Q +   N +   + +     LG   +IS   +    V NH +F + +
Sbjct:   303 KQKDIAKVFAGYIQPKDPNNGQMYQKTL-----LGAILNISCLLKTPGVVENHGYFLNPS 357

Query:   365 DLNNKSIQATLQNGLQLTRGF---LYRICHTMLRNNP-TRETMLGYLAALVGHNEKRAQL 420
               + + I+    N  Q    F   +Y++   +L+ +P T+  +L +L   +  N  R ++
Sbjct:   358 RSSPQEIKVQESNIHQFMAQFHEKIYQMLKNLLQLSPETKHRILSWLGNCLHANSGRTKI 417

Query:   421 QSEE------STLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLSFKNDTR- 473
              + +         A D F LNL A    L       K   +  F+P    +     + R 
Sbjct:   418 WANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPKSPKLLTFNPTYCALKELNEEERR 477

Query:   474 ---LKMSSQEVEDWLASLSSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRRVRSLRD 530
                + M   E E  L  + +   +EP+F+++   +T +   L+       + R    L D
Sbjct:   478 SKNVHMKGLEKETCL--IPAVTEQEPEFANSYNLVTENLV-LTQYTLHLGFHR----LHD 530

Query:   531 -LQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNLMKKSA 589
              + K+   L   +  WR     + +       + Q ++L          + +  +++   
Sbjct:   531 QMVKINQSLHRLQVAWREA--QQSSNPAADSLREQFERLMTIYLSMKTAMTEPQMLQNCL 588

Query:   590 VFYMSVAEYLLRVMTGEENL--CNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQYIP 647
                +S+A  L+++  G +      +T PLP       A +PE++ +++ +F +F  ++  
Sbjct:   589 NLQVSMAVLLVQLAIGNQGTEPLELTFPLPGVENSALAYVPEFFADNLGDFFIFLRRFAD 648

Query:   648 GIEDVVED---RCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRIMA 704
              I +   D     + ++ V M   + +KNP+L AKL EVL    P +    + L   +  
Sbjct:   649 DILETSADSLEHILHFVTVFMGDVERMKNPHLRAKLAEVLEAVMPHLDQAQNPLVSSVFH 708

Query:   705 HK--FSS-QF---LPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQA 758
              K  F S Q+   L   L+K + D+E TG   +F  KF  R  +  IL+ MW +  +RQ+
Sbjct:   709 RKRVFCSYQYAAHLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDSYRQS 768

Query:   759 ------FINES-KTGNQ--FVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAA 809
                   + +E+ +  N   F++F+N+LMND  FLLDE+++ L +I + Q++ +D   +  
Sbjct:   769 IKALADYASENLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKI-KIQQIEKDRGEWDN 827

Query:   810 IPAEQQLSRERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNF 869
             +  E +  +E  L    +  R +  +  ET+    +LT EIK  F+ P L  R+ +MLN+
Sbjct:   828 LSQEARREKESSLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNY 887

Query:   870 NLQQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHL 908
              LQ L GPK   LKV    ++ + P++L++ +  IYL+L
Sbjct:   888 FLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNL 926

 Score = 233 (87.1 bits), Expect = 1.3e-56, Sum P(2) = 1.3e-56
 Identities = 45/79 (56%), Positives = 56/79 (70%)

Query:   966 KKEVDYNDAPDEFRDPLMDTLMEDPVTLPSG-VVMDRSVIVRHLLNSSTDPFSRQPLFED 1024
             ++E  Y DA DEF DP+M TLM DPV LPS  V +DRS I RHLL+  TDPF+R PL  D
Sbjct:   982 QEEETYADACDEFLDPIMSTLMSDPVILPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMD 1041

Query:  1025 NLKPNEELKKKIEAWKREK 1043
              ++PN ELK+KI+ W  E+
Sbjct:  1042 QIRPNRELKEKIQQWLAER 1060


>UNIPROTKB|B7Z7P0 [details] [associations]
            symbol:UBE4A "cDNA FLJ51394, highly similar to Ubiquitin
            conjugation factor E4 A" species:9606 "Homo sapiens" [GO:0000151
            "ubiquitin ligase complex" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
            activity" evidence=IEA] InterPro:IPR003613 InterPro:IPR019474
            Pfam:PF04564 Pfam:PF10408 SMART:SM00504 GO:GO:0005737
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000209
            GO:GO:0000151 GO:GO:0034450 EMBL:AP001582 HOGENOM:HOG000007049
            OrthoDB:EOG4CRKZ8 UniGene:Hs.602967 UniGene:Hs.75275
            HGNC:HGNC:12499 ChiTaRS:UBE4A EMBL:AP001267 EMBL:AK302328
            IPI:IPI01012808 SMR:B7Z7P0 STRING:B7Z7P0 Ensembl:ENST00000545354
            Uniprot:B7Z7P0
        Length = 538

 Score = 578 (208.5 bits), Expect = 3.1e-55, P = 3.1e-55
 Identities = 157/456 (34%), Positives = 244/456 (53%)

Query:   612 ITLPLP---STVR--PEFAALPEWYVEDIAEFLL-FALQYIPGIEDVVEDRCVTWLLVTM 665
             +T PLP   S++   PEF A     + D   FL  FA   +    D +E   + ++ +  
Sbjct:    82 LTFPLPDGYSSLAYVPEFFADN---LGDFLIFLRRFADDILETSADSLE-HVLHFITIFT 137

Query:   666 CSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRIMAHK--FSS-QFLPSY---LMKF 719
              S + +KNP+L AKL EVL    P +    + L   +   K  F + Q+ P     L+K 
Sbjct:   138 GSIERMKNPHLRAKLAEVLEAVMPHLDQTPNPLVSSVFHRKRVFCNFQYAPQLAEALIKV 197

Query:   720 YTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFIN---------ESKTGNQFV 770
             + D+E TG   +F  KF  R  +  IL+ MW +  +R++  +         E+     F+
Sbjct:   198 FVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDTYRESIKDLADYASKNLEAMNPPLFL 257

Query:   771 KFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQLAADERQCR 830
             +F+N+LMND  FLLDE+++ L +I + Q++ +D   + ++  E +  +E  L    +  R
Sbjct:   258 RFLNLLMNDAIFLLDEAIQYLSKI-KIQQIEKDRGEWDSLTPEARREKEAGLQMFGQLAR 316

Query:   831 SYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHLKVSSPDKY 890
              +  +  ET+    +LT EIK  F+ P L  R+ +MLN+ LQ L GPK   LKV    ++
Sbjct:   317 FHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEF 376

Query:   891 GWDPRRLLNQLVDIYLHL-DCDEFAAAIAQDERSFRKELFDDAADRMERRQILLPSSLDK 949
              + P++L++ +  IYL+L D + F A + +D RS+   LF      +++  I  P ++  
Sbjct:   377 DFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKK--INKPGNMIM 434

Query:   950 -FRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSG-VVMDRSVIVRH 1007
              F  LA R   ++    ++E  Y DA DEF DP+M TLM DPV LPS  V +DRS I RH
Sbjct:   435 AFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARH 494

Query:  1008 LLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
             LL+  TDPF+R PL  D ++PN ELK+KI+ W  E+
Sbjct:   495 LLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAER 530

 Score = 176 (67.0 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 55/237 (23%), Positives = 106/237 (44%)

Query:   533 KLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNLMKKSAVFY 592
             K+   L   +  WR     + +       + Q ++L          + +  +++      
Sbjct:     3 KINQNLHRLQVAWRDA--QQSSSPAADNLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQ 60

Query:   593 MSVAEYLLRVMTGEENL--CNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQYIPGIE 650
             +S+A  L+++  G E      +T PLP       A +PE++ +++ +FL+F  ++   I 
Sbjct:    61 VSMAVLLVQLAIGNEGSQPIELTFPLPDGYS-SLAYVPEFFADNLGDFLIFLRRFADDIL 119

Query:   651 DVVED---RCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRIMAHK- 706
             +   D     + ++ +   S + +KNP+L AKL EVL    P +    + L   +   K 
Sbjct:   120 ETSADSLEHVLHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPNPLVSSVFHRKR 179

Query:   707 -FSS-QFLPSY---LMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQA 758
              F + Q+ P     L+K + D+E TG   +F  KF  R  +  IL+ MW +  +R++
Sbjct:   180 VFCNFQYAPQLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDTYRES 236


>UNIPROTKB|E2RPU3 [details] [associations]
            symbol:UBE4A "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000209
            "protein polyubiquitination" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
            SMART:SM00504 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450 CTD:9354
            GeneTree:ENSGT00390000009300 KO:K10596 OMA:DRDAGEK
            EMBL:AAEX03003449 RefSeq:XP_850081.1 Ensembl:ENSCAFT00000038039
            GeneID:479418 KEGG:cfa:479418 NextBio:20854604 Uniprot:E2RPU3
        Length = 1066

 Score = 587 (211.7 bits), Expect = 8.8e-54, P = 8.8e-54
 Identities = 239/839 (28%), Positives = 376/839 (44%)

Query:   248 FLSDFVCTLYEDEE--TFKQVMSP---ILQGVYKAMTEASIADPDYSKPLEALT---DLL 299
             FL + +  L  DEE  TF +VM P   IL G  K +    I    Y   L   T   D+ 
Sbjct:   248 FLEEVIEALIMDEEVRTFPEVMIPVFDILLGRIKDLELCQILFYAYLDILLYFTRQKDMA 307

Query:   300 EIRIG--SNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFAEDDVKVGN 357
             ++ +       P    +  +      LN   + +   V    G F + S  +  ++KV  
Sbjct:   308 KVFVEYIQPKDPSNGQMYQKTLLGVILNISCLLKTPGVVENHGYFLNPSRSSPQEIKVQE 367

Query:   358 HFFSSVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNPTRETMLGY-LAALVGHNEK 416
                       ++ I   L+N LQL+        H +L       + LG  L A  G  + 
Sbjct:   368 ANIHQFMAQFHEKIYQMLKNLLQLSP----ETKHCIL-------SWLGNCLHANAGRTKI 416

Query:   417 RAQLQSEE--STLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLSFKNDTRL 474
              A    E      A D F LNL A    L       +   +  F+P    +    ND   
Sbjct:   417 WANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSSRLLTFNPTYCALKEL-NDEER 475

Query:   475 KMSSQEVEDW-LASLSSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRRVRSLRDLQK 533
             K+ +  +      +    A +EPKF      +T +     +L     Y    R    + K
Sbjct:   476 KIKNVHMRGLDKETCLIPAVQEPKFPQNYNLVTENL----VLTEYTLYLGFHRLHDQMVK 531

Query:   534 LVDELSSTEETWRGTVIARRNK-DFLKRWKHQIKK--LSRSKACADAGLLDK--NLMKKS 588
             +   L   +  WR    +     D L+    ++    LS   A  +  +L    NL    
Sbjct:   532 INQNLHRLQVAWRDAQQSSSPAADNLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQVSM 591

Query:   589 AVFYMSVAEYLLRVMTGEENLCNITLPLP---STVR--PEFAALPEWYVEDIAEFLL-FA 642
             AV  + +A        G + +  +T PLP   S++   PEF A     + D   FL  FA
Sbjct:   592 AVLLVQLAIG----NEGSQPI-ELTFPLPDGYSSLAYVPEFFADN---LGDFLIFLRRFA 643

Query:   643 LQYIPGIEDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDV-QTRT---SNL 698
                +    D +E   + ++ +   S + +KNP+L AKL EVL    P + QT     S++
Sbjct:   644 DDILETSADSLE-HVLHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPNPLVSSV 702

Query:   699 YDR--IMAHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHR 756
             + R  +  +   +  L   L+K + D+E TG   +F  KF  R  +  IL+ MW +  +R
Sbjct:   703 FHRKRVFCNFPHAPHLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDTYR 762

Query:   757 QAFIN---------ESKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAY 807
             ++  +         E+     F++F+N+LMND  FLLDE+++ L +I + Q++ +D   +
Sbjct:   763 ESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKI-KIQQIEKDRGEW 821

Query:   808 AAIPAEQQLSRERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAML 867
              ++  E +  +E  L    +  R +  +  ET+    +LT EIK  F+ P L  R+ +ML
Sbjct:   822 DSLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISML 881

Query:   868 NFNLQQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHL-DCDEFAAAIAQDERSFRK 926
             N+ LQ L GPK   LKV    ++ + P++L++ +  IYL+L D + F A + +D RS+  
Sbjct:   882 NYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSP 941

Query:   927 ELFDDAADRMERRQILLPSSLD-KFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDT 985
              LF      +++  I  P ++   F  LA R   ++    ++E  Y DA DEF DP+M T
Sbjct:   942 TLFAQTVRVLKK--INKPGNMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMST 999

Query:   986 LMEDPVTLPSG-VVMDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
             LM DPV LPS  V +DRS I RHLL+  TDPF+R PL  D ++PN ELK+KI+ W  E+
Sbjct:  1000 LMSDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAER 1058


>UNIPROTKB|F1SAK7 [details] [associations]
            symbol:UBE4A "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000209
            "protein polyubiquitination" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
            SMART:SM00504 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450
            GeneTree:ENSGT00390000009300 OMA:DRDAGEK EMBL:CU914235
            Ensembl:ENSSSCT00000016461 Uniprot:F1SAK7
        Length = 1067

 Score = 585 (211.0 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 238/839 (28%), Positives = 373/839 (44%)

Query:   248 FLSDFVCTLYEDEE--TFKQVMSP---ILQGVYKAMTEASIADPDYSKPLEALT---DLL 299
             FL + +  L  DEE  TF +VM P   IL G  K +    I    Y   L   T   D+ 
Sbjct:   248 FLDEIIGALILDEEVRTFSEVMIPVFDILLGRIKDLDLCQILLYAYLDILLYFTRQKDMA 307

Query:   300 EIRIG--SNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFAEDDVKVGN 357
             ++ +       P    +  +      LN   + +   V    G F + S  +  ++KV  
Sbjct:   308 KVFVEYIQPKDPNNGQMYQKTLLGVILNISCLLKTPGVVENHGYFLNPSRSSPQEIKVQE 367

Query:   358 HFFSSVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNPTRETMLGY-LAALVGHNEK 416
                       ++ I   L+N LQL+        H +L       + LG  L A  G  + 
Sbjct:   368 ANIHQFMARFHEKIYQMLKNLLQLSP----ETKHCIL-------SWLGNCLHANAGRTKI 416

Query:   417 RAQLQSEE--STLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLSFKNDTRL 474
              A    E      A D F LNL A    L       +   +  F+P    +    ND   
Sbjct:   417 WANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSSRLLTFNPTYCALKEL-NDEER 475

Query:   475 KMSSQEVEDW-LASLSSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRRVRSLRDLQK 533
             K+ +  +      +    A +EPKF      +T +     +L     Y    R    + K
Sbjct:   476 KIKNVHMRGLDKETCLIPAVQEPKFPQNYNLVTENL----VLTEYTLYLGFHRLHDQMVK 531

Query:   534 LVDELSSTEETWRGTVIARRNK-DFLKRWKHQIKK--LSRSKACADAGLLDK--NLMKKS 588
             +   L   +  WR    +     D L+    ++    LS   A  +  +L    NL    
Sbjct:   532 INQNLHRLQIAWRDAQQSSSPAADNLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQVSM 591

Query:   589 AVFYMSVAEYLLRVMTGEENLCNITLPLP---STVR--PEFAALPEWYVEDIAEFLL-FA 642
             AV  + +A        G + +  +T PLP   S++   PEF A     + D   FL  FA
Sbjct:   592 AVLLVQLAIG----NEGSQPI-ELTFPLPDGYSSLAYVPEFFADN---LGDFLIFLRRFA 643

Query:   643 LQYIPGIEDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRI 702
                +    D +E   + ++ +   S + +KNP+L AKL EVL    P +    + L   +
Sbjct:   644 DDILETSADSLE-HVLHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPNPLVSSV 702

Query:   703 MAHK-----FS-SQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHR 756
                K     F+ +  L   L+K + D+E TG   +F  KF  R  +  IL+ MW +  +R
Sbjct:   703 FHRKRVFCNFAYAAHLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDNYR 762

Query:   757 QAFIN---------ESKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAY 807
             ++  +         E+     F++F+N+LMND  FLLDE+++ L +I + Q++ +D   +
Sbjct:   763 ESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKI-KIQQIEKDRGEW 821

Query:   808 AAIPAEQQLSRERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAML 867
              ++  E +  +E  L    +  R +  +  ET+    +LT EIK  F+ P L  R+ +ML
Sbjct:   822 DSLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISML 881

Query:   868 NFNLQQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHL-DCDEFAAAIAQDERSFRK 926
             N+ LQ L GPK   LKV    ++ + P++L++ +  IYL+L D + F A + +D RS+  
Sbjct:   882 NYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSP 941

Query:   927 ELFDDAADRMERRQILLPSSLD-KFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDT 985
              LF      +++  I  P ++   F  LA R   ++    ++E  Y DA DEF DP+M T
Sbjct:   942 TLFAQTVRVLKK--INKPGNMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMST 999

Query:   986 LMEDPVTLPSG-VVMDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
             LM DPV LPS  V +DRS I RHLL+  TDPF+R PL  D ++PN ELK+KI+ W  E+
Sbjct:  1000 LMSDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAER 1058


>ZFIN|ZDB-GENE-070410-21 [details] [associations]
            symbol:ube4a "ubiquitination factor E4A (UFD2
            homolog, yeast)" species:7955 "Danio rerio" [GO:0000151 "ubiquitin
            ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
            activity" evidence=IEA] [GO:0016567 "protein ubiquitination"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
            activity" evidence=IEA] InterPro:IPR003613 InterPro:IPR019474
            Pfam:PF04564 Pfam:PF10408 SMART:SM00504 ZFIN:ZDB-GENE-070410-21
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000151
            GO:GO:0034450 CTD:9354 GeneTree:ENSGT00390000009300 KO:K10596
            EMBL:CR847931 IPI:IPI00631668 RefSeq:XP_001922961.2
            UniGene:Dr.160617 UniGene:Dr.69923 Ensembl:ENSDART00000059376
            GeneID:557121 KEGG:dre:557121 NextBio:20881830 Bgee:E7F6E1
            Uniprot:E7F6E1
        Length = 1076

 Score = 579 (208.9 bits), Expect = 7.0e-53, P = 7.0e-53
 Identities = 155/438 (35%), Positives = 237/438 (54%)

Query:   622 PEFAALPEWYVEDIAEFLL-FALQYIPGIEDVVEDRCVTWLLVTMCSPQMIKNPYLLAKL 680
             PEF A  E  + D   FL  FA + +    + +E   +T++ V M +   +KNP+L AKL
Sbjct:   631 PEFFA--E-NMGDFFIFLRRFADEVLESSAESLE-HVLTFITVLMGNVDRMKNPHLRAKL 686

Query:   681 IEVLFISNPDVQTRTSNLYDRIMAHK---FSS-QFLPSY---LMKFYTDVETTGSSSEFY 733
              EVL    P ++T +      IM  +   FSS +  P     L+  + D+E TG   +F 
Sbjct:   687 AEVLEAVMPHMETLSPGAAQPIMFQRQRVFSSYRHAPQLAEALITVFVDIEFTGDPHQFE 746

Query:   734 DKFTIRYHISLILKGMWESPIHRQAFIN---------ESKTGNQFVKFVNMLMNDTTFLL 784
              KF  R  +  ILK MW    +R++  N         E+     F++F+N+LMND  FLL
Sbjct:   747 QKFNYRRPMYAILKYMWGEKSYRESIKNLADYASENLEAMNPPLFLRFLNLLMNDAIFLL 806

Query:   785 DESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQLAADERQCRSYLTLGRETVDMFH 844
             DE+++ L +I   Q L RD   + ++  + +  +E  L    +  R +  +  ET+    
Sbjct:   807 DEAIQYLSKIKILQ-LERDRGEWDSLAPDARREKESSLQMFGQLGRFHNIMSNETIGTLA 865

Query:   845 YLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDI 904
             +LT EIK  F+ P L  R+ +MLN+ LQ L GPK   LKV    ++ + P++L++ +  I
Sbjct:   866 FLTSEIKGLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTI 925

Query:   905 YLHL-DCDEFAAAIAQDERSFRKELFDDAADRMERRQILLPSSLD-KFRALASRAHEISV 962
             YL+L D + F A + +D RS+   LF      +++  I  P  +   F  LA +   ++ 
Sbjct:   926 YLNLGDEENFCATVPKDGRSYSPTLFCQTVRVLKK--INKPGDMIISFSLLADKIKSLAD 983

Query:   963 ANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSG-VVMDRSVIVRHLLNSSTDPFSRQPL 1021
              + ++E  ++DAPDEF DP+M TLM DPV LPS  V +DRS I RHLL+  TDPF+R PL
Sbjct:   984 RHQQEEETFSDAPDEFLDPIMSTLMLDPVLLPSSNVTVDRSTIARHLLSDQTDPFNRSPL 1043

Query:  1022 FEDNLKPNEELKKKIEAW 1039
               D ++PNEEL+++I  W
Sbjct:  1044 TMDQIRPNEELRQQIMKW 1061

 Score = 266 (98.7 bits), Expect = 6.9e-19, P = 6.9e-19
 Identities = 146/643 (22%), Positives = 271/643 (42%)

Query:   183 ASYARVFEEERNNPKKCSIFPF--KDV-LYEVRTQLVRHSILVLQSTNSDPMSSPLVKPL 239
             A Y R  EE    P+K   F    K++ +   RT L+   I + Q+   + +   L++ +
Sbjct:   182 ACYQRAKEEITKVPEKLLSFAVHCKNLTVSNARTVLLTPEIYISQNVY-EQLLDLLLEAV 240

Query:   240 INQTLPN--GFLSDFVCTLYEDEE--TFKQVMSPILQGVYKAMTEASIADPDYSKPLEAL 295
                       FL + + +L  D+E  TF +VM P+       +    + D D  + L  L
Sbjct:   241 RGAQFEEVVEFLEEVIASLLADQEVRTFGEVMVPVFD-----IFHGRVKDLDLCQLL--L 293

Query:   296 TDLLEIRIG-SNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFAEDDVK 354
                LEI +  S    +   L+  +Q +   N    G +   T  LG   +IS   +    
Sbjct:   294 FSYLEILLYFSRQKDIAKVLMEHIQPKDPNN----GIQYQKT-LLGAILNISCLLKTPGV 348

Query:   355 VGNH-FFSSVTDLNNKSIQATLQNGLQLTRGF---LYRICHTMLRNN-PTRETMLGYLAA 409
             V NH FF + +  + + ++    N  Q    F   LY+I   +L+ +  TR  +L +L  
Sbjct:   349 VENHGFFLNPSRSSPQELKVQESNIHQFMGQFHDKLYQILKNLLQQSGETRHLLLSWLGG 408

Query:   410 LVGHNEKRAQLQSEE------STLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKS 463
              +  N  RA++ + +         A D F LNL A    L           +  F+P   
Sbjct:   409 CLQANMGRAKIWANQMPEIFFQMYASDAFFLNLGAALLKLCQPFSRPYSPKLLTFNPTYC 468

Query:   464 EMLSFKNDTRLKMS--SQEVEDWLASLSSTAWREPKFSSTCWFLTLHCTHLSLLPALAKY 521
              +     + R   +  ++ ++     +     +  +F+ +   LT +     +L  L  Y
Sbjct:   469 LLKELSEEERRNRNVHARGLDKETCLIPVPPQQTVEFAQSYSLLTENL----ILTQLTLY 524

Query:   522 QRRVRSLRDLQKLVDELSSTEETWRGTVIAR--RNKDFLKRWKHQIKKLSRSKACADAGL 579
                 R    + K+   L   + TWR T ++      +  ++++H +     +KA      
Sbjct:   525 LGFHRLHDQMVKMNQSLHRLQGTWRDTQLSGGPAAAELREQFEHLMTVYLSTKAATTQPT 584

Query:   580 LDKNLMKKSAVFYMSVAEYLLRVMTGEENLCNI--TLPLPSTVRPEFAALPEWYVEDIAE 637
             + +N +   A    S A  L+++  G +   +I  T PLPS        +PE++ E++ +
Sbjct:   585 MLQNCLNLQA----SCAALLVQLSLGNQGPEHIPLTFPLPSLENSLLCYVPEFFAENMGD 640

Query:   638 FLLFALQYIPGI-EDVVE--DRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTR 694
             F +F  ++   + E   E  +  +T++ V M +   +KNP+L AKL EVL    P ++T 
Sbjct:   641 FFIFLRRFADEVLESSAESLEHVLTFITVLMGNVDRMKNPHLRAKLAEVLEAVMPHMETL 700

Query:   695 TSNLYDRIMAHK---FSS-QFLPSY---LMKFYTDVETTGSSSEFYDKFTIRYHISLILK 747
             +      IM  +   FSS +  P     L+  + D+E TG   +F  KF  R  +  ILK
Sbjct:   701 SPGAAQPIMFQRQRVFSSYRHAPQLAEALITVFVDIEFTGDPHQFEQKFNYRRPMYAILK 760

Query:   748 GMWESPIHRQAFINESKTGNQFVKFVN--MLMNDTTFLLDESL 788
              MW    +R++  N +   ++ ++ +N  + +     L+++++
Sbjct:   761 YMWGEKSYRESIKNLADYASENLEAMNPPLFLRFLNLLMNDAI 803


>UNIPROTKB|F1M8W6 [details] [associations]
            symbol:Ube4a "Ubiquitin conjugation factor E4 A"
            species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
            complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
            ligase activity" evidence=IEA] InterPro:IPR003613
            InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
            RGD:1303173 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0000151 GO:GO:0034450 IPI:IPI00476304
            Ensembl:ENSRNOT00000021060 ArrayExpress:F1M8W6 Uniprot:F1M8W6
        Length = 1030

 Score = 429 (156.1 bits), Expect = 2.6e-52, Sum P(3) = 2.6e-52
 Identities = 98/261 (37%), Positives = 150/261 (57%)

Query:   786 ESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQLAADERQCRSYLTLGRETVDMFHY 845
             ES++ L +I + Q++ +D   + ++  E +  +E  L    +  R +  +  ET+    +
Sbjct:   765 ESIKYLSKI-KIQQIEKDRGEWESLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLSF 823

Query:   846 LTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIY 905
             LT EIK  F+ P L  R+ +MLN+ LQ L GPK   LKV    ++ + P++L++ +  IY
Sbjct:   824 LTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIY 883

Query:   906 LHL-DCDEFAAAIAQDERSFRKELFDDAADRMERRQILLPSSLD-KFRALASRAHEISVA 963
             L+L D + F A + +D RS+   LF      +++  I  P ++   F  LA R   ++  
Sbjct:   884 LNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKK--INKPGNMIVAFSNLAERIKSLADL 941

Query:   964 NIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSG-VVMDRSVIVRHLLNSSTDPFSRQPLF 1022
               ++E  Y DA DEF DP+M TLM DPV LPS  V +DRS I RHLL+  TDPF+R PL 
Sbjct:   942 QQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLT 1001

Query:  1023 EDNLKPNEELKKKIEAWKREK 1043
              D ++PN ELK+KI+ W  E+
Sbjct:  1002 MDQIRPNTELKEKIQRWLAER 1022

 Score = 209 (78.6 bits), Expect = 2.6e-52, Sum P(3) = 2.6e-52
 Identities = 120/543 (22%), Positives = 220/543 (40%)

Query:   248 FLSDFVCTLYEDEE--TFKQVMSPILQGVYKAMTEASIADPDYSKPLEALTDLLEIRIGS 305
             FL + +  L  DEE  TF +VM P+   +   + +  +        L A  D+L      
Sbjct:   250 FLEEVIEALLLDEEVRTFPEVMIPVFDILLGRIKDLELCQI----LLYAYLDILLYFTRQ 305

Query:   306 NVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFAEDDVKVGNH-FFSSVT 364
                 +    +  +Q +   N +   + +     LG   +IS   +    V NH FF + +
Sbjct:   306 K--DMAKVFLEYIQPKDPSNGQMYQKTL-----LGVILNISCLLKTPGVVENHGFFLNPS 358

Query:   365 DLNNKSIQATLQNGLQLTRGF---LYRICHTMLRNNP-TRETMLGYLAALVGHNEKRAQL 420
               + + I+    N  Q    F   +Y++   +L+ +P T+  +L +L   +  N  R ++
Sbjct:   359 RSSPQEIKVQEANIHQFMAQFHEKIYQMLKNLLQLSPETKHGILFWLGNCLHANAGRTKI 418

Query:   421 QSEE------STLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLSFKNDTRL 474
              + +         A D F LNL A    L       +   +  F+P    +L   ND   
Sbjct:   419 WANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSSRLLTFNPTYC-VLKDLNDEER 477

Query:   475 KMSSQEVEDW-LASLSSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRRVRSLRD-LQ 532
             K+ S  +      +    A +EP F  +   +T +   L+       + R    L D + 
Sbjct:   478 KIKSVHMRGLDKETCLIPAVQEPVFPQSYNLVTENLA-LTEYTLYLGFHR----LHDQMV 532

Query:   533 KLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNLMKKSAVFY 592
             K+   L   +  WR     + +       + Q ++L          + +  +++      
Sbjct:   533 KINQNLHRLQVAWRDA--QQSSSPAADNLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQ 590

Query:   593 MSVAEYLLRVMTGEENLCNITL--PLPSTVRPEFAALPEWYVEDIAEFLLFALQYIPGIE 650
             +S+A  L+++  G E    I L  PLP       A +PE++ +++ +FL+F  ++   I 
Sbjct:   591 VSMAVLLVQLAIGNEGSQPIELSFPLPDGYS-SLAYVPEFFADNLGDFLIFLRRFAEDIL 649

Query:   651 DVVED---RCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRIMAHK- 706
             +   D     + ++ +   S + +KNP+L AKL EVL    P +    S L   +   K 
Sbjct:   650 ETSADSLEHVLHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPSPLVSSVFHRKR 709

Query:   707 -FSS-QFLPSY---LMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFIN 761
              F +  + P     L+K + D+E TG   +F  KF  R  +  IL+ MW +  +R++   
Sbjct:   710 VFCNFPYAPQLSEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDSYRESIKY 769

Query:   762 ESK 764
              SK
Sbjct:   770 LSK 772

 Score = 40 (19.1 bits), Expect = 2.6e-52, Sum P(3) = 2.6e-52
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query:    45 PSGRDDMIGSIGQKVNLGTSPMEIDKSVIKISEKPQAHGEPME 87
             P+  DD   S+ + ++      E D SV +IS   + H E  E
Sbjct:    46 PASPDDSDNSVSESLD------EFDYSVSEISRSFRTHQEMCE 82


>UNIPROTKB|E1C6M5 [details] [associations]
            symbol:CBL "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0000209 "protein polyubiquitination"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0034450
            "ubiquitin-ubiquitin ligase activity" evidence=IEA]
            InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
            SMART:SM00504 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450
            GeneTree:ENSGT00390000009300 OMA:DRDAGEK EMBL:AADN02041816
            EMBL:AADN02041817 EMBL:AADN02041818 EMBL:AADN02041819
            EMBL:AADN02041820 EMBL:AADN02041821 EMBL:AADN02041822
            EMBL:AADN02041823 EMBL:AADN02041824 EMBL:AADN02041825
            EMBL:AADN02041826 EMBL:AADN02041827 EMBL:AADN02041828
            EMBL:AADN02041829 EMBL:AADN02041830 EMBL:AADN02041831
            EMBL:AADN02041832 EMBL:AADN02041833 IPI:IPI00820763
            Ensembl:ENSGALT00000040809 ArrayExpress:E1C6M5 Uniprot:E1C6M5
        Length = 1072

 Score = 534 (193.0 bits), Expect = 6.1e-48, P = 6.1e-48
 Identities = 199/660 (30%), Positives = 313/660 (47%)

Query:   428 AGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLSFKNDTR----LKMSSQEVED 483
             A D F LNL A    L       K   +  F+P    +     + R    + M   E E 
Sbjct:   431 ASDAFFLNLGAALLKLCQPFCKPKSPKLLTFNPTYCALKELNEEERRSKNVHMKGLEKET 490

Query:   484 WLASLSSTAWREPKFSSTC------WFLTLHCTHLSLLPALAKYQRRVRSLRDLQKLVDE 537
              L  + +   +EP+F+++         LT +  HL     L  + + V+  + L +L  +
Sbjct:   491 CL--IPAVTEQEPEFANSYNLVTENLVLTQYTLHLGFHSRL--HDQMVKINQSLHRL--Q 544

Query:   538 LSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDK--NLMKKSAVFYMSV 595
             ++  E        A   ++  +R       LS   A  +  +L    NL    AV  + +
Sbjct:   545 VAWREAQQSSNPAADSLREQFERL--MTIYLSMKTAMTEPQMLQNCLNLQVSMAVLLVQL 602

Query:   596 AEYLLRVMTGEENL-CNITLP-LPSTVR---PEFAA--LPEWYVEDIAEFLL-FALQYIP 647
             A        G E L     LP + ++     PEF A  L ++++     FL  FA   + 
Sbjct:   603 AIG----NQGTEPLELTFPLPGVENSALAYVPEFFADNLGDFFI-----FLRRFADDILE 653

Query:   648 GIEDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRIMAHK- 706
                D +E   + ++ V M   + +KNP+L AKL EVL    P +    + L   +   K 
Sbjct:   654 TSADSLE-HILHFVTVFMGDVERMKNPHLRAKLAEVLEAVMPHLDQAQNPLVSSVFHRKR 712

Query:   707 -FSS-QF---LPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQA--- 758
              F S Q+   L   L+K + D+E TG   +F  KF  R  +  IL+ MW +  +RQ+   
Sbjct:   713 VFCSYQYAAHLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDSYRQSIKA 772

Query:   759 ---FINES-KTGNQ--FVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPA 812
                + +E+ +  N   F++F+N+LMND  FLLDE+++ L +I + Q++ +D   +  +  
Sbjct:   773 LADYASENLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKI-KIQQIEKDRGEWDNLSQ 831

Query:   813 EQQLSRERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQ 872
             E +  +E  L    +  R +  +  ET+    +LT EIK  F+ P L  R+ +MLN+ LQ
Sbjct:   832 EARREKESSLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQ 891

Query:   873 QLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDC---DEFAAAIAQDERSFRKELF 929
              L GPK   LKV    ++ + P++L++ +  IYL+L C   D+    I + +  F  +L 
Sbjct:   892 HLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGCWDTDDVCKEIGKWK--FWPKLL 949

Query:   930 DDAADRMERRQILLP-----SSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMD 984
                A+     Q L P     +S+   ++LA R  +       +E  Y DA DEF DP+M 
Sbjct:   950 --VANVCVLNQALCPVLWFCNSVCACQSLADRQQQ-------EEETYADACDEFLDPIMS 1000

Query:   985 TLMEDPVTLPSG-VVMDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK 1043
             TLM DPV LPS  V +DRS I RHLL+  TDPF+R PL  D ++PN ELK+KI+ W  E+
Sbjct:  1001 TLMSDPVILPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNRELKEKIQQWLAER 1060

 Score = 385 (140.6 bits), Expect = 9.9e-32, P = 9.9e-32
 Identities = 159/700 (22%), Positives = 303/700 (43%)

Query:   248 FLSDFVCTLYEDEE--TFKQVMSPILQGVYKAMTEASIADPDYSKPLEALTDLLEIRIGS 305
             FL + +  L  DEE  TF +VM P+       +  + I D D  + L   T L  I   +
Sbjct:   249 FLEEVIEALTMDEEVRTFGEVMVPVFD-----ILLSRIKDLDLCQIL-LYTYLDMILYFT 302

Query:   306 NVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFAEDDVKVGNH-FFSSVT 364
                 +       +Q +   N +   + +     LG   +IS   +    V NH +F + +
Sbjct:   303 KQKDIAKVFAGYIQPKDPNNGQMYQKTL-----LGAILNISCLLKTPGVVENHGYFLNPS 357

Query:   365 DLNNKSIQATLQNGLQLTRGF---LYRICHTMLRNNP-TRETMLGYLAALVGHNEKRAQL 420
               + + I+    N  Q    F   +Y++   +L+ +P T+  +L +L   +  N  R ++
Sbjct:   358 RSSPQEIKVQESNIHQFMAQFHEKIYQMLKNLLQLSPETKHRILSWLGNCLHANSGRTKI 417

Query:   421 QSEE------STLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLSFKNDTR- 473
              + +         A D F LNL A    L       K   +  F+P    +     + R 
Sbjct:   418 WANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPKSPKLLTFNPTYCALKELNEEERR 477

Query:   474 ---LKMSSQEVEDWLASLSSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRRVRSLRD 530
                + M   E E  L  + +   +EP+F+++   +T +         L  + R    L D
Sbjct:   478 SKNVHMKGLEKETCL--IPAVTEQEPEFANSYNLVTENLVLTQYTLHLGFHSR----LHD 531

Query:   531 -LQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNLMKKSA 589
              + K+   L   +  WR     + +       + Q ++L          + +  +++   
Sbjct:   532 QMVKINQSLHRLQVAWREA--QQSSNPAADSLREQFERLMTIYLSMKTAMTEPQMLQNCL 589

Query:   590 VFYMSVAEYLLRVMTGEENL--CNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQYIP 647
                +S+A  L+++  G +      +T PLP       A +PE++ +++ +F +F  ++  
Sbjct:   590 NLQVSMAVLLVQLAIGNQGTEPLELTFPLPGVENSALAYVPEFFADNLGDFFIFLRRFAD 649

Query:   648 GIEDVVED---RCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRIMA 704
              I +   D     + ++ V M   + +KNP+L AKL EVL    P +    + L   +  
Sbjct:   650 DILETSADSLEHILHFVTVFMGDVERMKNPHLRAKLAEVLEAVMPHLDQAQNPLVSSVFH 709

Query:   705 HK--FSS-QF---LPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQA 758
              K  F S Q+   L   L+K + D+E TG   +F  KF  R  +  IL+ MW +  +RQ+
Sbjct:   710 RKRVFCSYQYAAHLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDSYRQS 769

Query:   759 FINESKTGNQFVKFVN--MLMNDTTFLLDESL----ESLKRIHET--QELMRDEAAYAAI 810
                 +   ++ ++ +N  + +     L+++++    E+++ + +   Q++ +D   +  +
Sbjct:   770 IKALADYASENLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIEKDRGEWDNL 829

Query:   811 PAEQQLSRERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFN 870
               E +  +E  L    +  R +  +  ET+    +LT EIK  F+ P L  R+ +MLN+ 
Sbjct:   830 SQEARREKESSLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYF 889

Query:   871 LQQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDC 910
             LQ L GPK   LKV    ++ + P++L++ +  IYL+L C
Sbjct:   890 LQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGC 929


>UNIPROTKB|K7EP75 [details] [associations]
            symbol:UBE4B "Ubiquitin conjugation factor E4 B"
            species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
            activity" evidence=IEA] InterPro:IPR019474 Pfam:PF10408
            EMBL:AL590639 EMBL:AL096841 HGNC:HGNC:12500 Ensembl:ENST00000470736
            Uniprot:K7EP75
        Length = 276

 Score = 434 (157.8 bits), Expect = 1.0e-39, P = 1.0e-39
 Identities = 92/219 (42%), Positives = 140/219 (63%)

Query:   353 VKVGNHFFS--SVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNPTRETMLGYLAAL 410
             VKV   +FS  ++T  N + +  +LQ+ L+L R  L++I H++L N  TRE  L Y+AA+
Sbjct:    60 VKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMAAV 119

Query:   411 VGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLSFKN 470
             V  N K+AQ+Q+++  ++ DGFMLN L V Q LS KI L  VD  Y FHP     ++  N
Sbjct:   120 VNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCR--ITLPN 177

Query:   471 D-TRLKMSSQEVEDWLASL--SSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRRVRS 527
             D TR+  + ++V DWL  L      + EPKF + C+FLTLH  HLS+LP+  +Y RR+R+
Sbjct:   178 DETRVNATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRA 237

Query:   528 LRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIK 566
             +R+L + V++L + E  W+ + +A R+++ LKR K Q+K
Sbjct:   238 IRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLK 276

 Score = 144 (55.7 bits), Expect = 8.1e-07, P = 8.1e-07
 Identities = 48/143 (33%), Positives = 71/143 (49%)

Query:   255 TLYEDEETFKQVMSPILQGVYKAMTEASIADPDYSK-PLEALTDLLEIRIGSNVWPVCSA 313
             T ++DEE FKQ+  PILQG+  A  E S+ D DY K PL AL +L E + G    PVC+ 
Sbjct:     2 TTHQDEEVFKQIFIPILQGLALAAKECSL-DSDYFKYPLMALGELCETKFGKT-HPVCNL 59

Query:   314 L-VSQVQFQ-PEL---NTKAVGREIAVTSYLG--PFFSI--SVFAEDDVK-VGNHFFSSV 363
             + V +  F  P +   NT+ V + +     LG    F I  S+    + +     + ++V
Sbjct:    60 VKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMAAV 119

Query:   364 TDLNNKSIQATLQNGLQLTRGFL 386
              + N K  Q    + L  T GF+
Sbjct:   120 VNANMKKAQMQTDDRLVSTDGFM 142


>UNIPROTKB|K7ERA7 [details] [associations]
            symbol:UBE4B "Ubiquitin conjugation factor E4 B"
            species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
            activity" evidence=IEA] InterPro:IPR019474 Pfam:PF10408
            EMBL:AL590639 EMBL:AL096841 HGNC:HGNC:12500 Ensembl:ENST00000488228
            Uniprot:K7ERA7
        Length = 98

 Score = 306 (112.8 bits), Expect = 5.1e-26, P = 5.1e-26
 Identities = 57/96 (59%), Positives = 73/96 (76%)

Query:   722 DVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFINESKTGNQFVKFVNMLMNDTT 781
             DVE TG++SEFYDKFTIRYHIS I K +W++  H   F+ E  +G QFV+++NML+NDTT
Sbjct:     2 DVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTT 61

Query:   782 FLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLS 817
             FLLDESLESLKRIHE QE M+++  +  +P   Q S
Sbjct:    62 FLLDESLESLKRIHEVQEEMKNKEQWDQLPRSLQCS 97


>WB|WBGene00000500 [details] [associations]
            symbol:chn-1 species:6239 "Caenorhabditis elegans"
            [GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IEA;IDA] [GO:0000151
            "ubiquitin ligase complex" evidence=IEA] [GO:0002119 "nematode
            larval development" evidence=IMP] [GO:0040011 "locomotion"
            evidence=IGI;IMP] [GO:0051865 "protein autoubiquitination"
            evidence=IDA] [GO:0018991 "oviposition" evidence=IGI] [GO:0045214
            "sarcomere organization" evidence=IGI] [GO:0000209 "protein
            polyubiquitination" evidence=IDA] [GO:0031625 "ubiquitin protein
            ligase binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0030544 "Hsp70 protein binding" evidence=IPI] [GO:0051087
            "chaperone binding" evidence=IPI] InterPro:IPR001440
            InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
            InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
            PROSITE:PS50293 SMART:SM00028 SMART:SM00504 GO:GO:0005737
            GO:GO:0018991 GO:GO:0002119 GO:GO:0040011 Gene3D:1.25.40.10
            GO:GO:0045214 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
            GO:GO:0000209 GO:GO:0000151 GO:GO:0051865 KO:K09561
            GeneTree:ENSGT00650000093277 EMBL:FO081495 EMBL:AF303269 PIR:T25874
            RefSeq:NP_491781.2 UniGene:Cel.19411 ProteinModelPortal:G5ECY6
            SMR:G5ECY6 EnsemblMetazoa:T09B4.10.1 EnsemblMetazoa:T09B4.10.2
            GeneID:172303 KEGG:cel:CELE_T09B4.10 CTD:172303 WormBase:T09B4.10
            OMA:HSWAYKL NextBio:874925 Uniprot:G5ECY6
        Length = 266

 Score = 137 (53.3 bits), Expect = 4.5e-06, P = 4.5e-06
 Identities = 40/130 (30%), Positives = 66/130 (50%)

Query:   911 DEFAAAIAQDER--SFRKELFDDAADRMERRQILLPSSLDKFRALASRAHEISVANIKKE 968
             +E +  I QD    ++ + L +   DR E  +   P  L +      R  E+++A  +K 
Sbjct:   125 EEESKRIVQDVEFHTYLESLIEK--DRQENSEN--PEELQRADMAKKRLTELTLATQEKR 180

Query:   969 VDYNDAPDEFRDPLMDTLMEDPVTLPSGVVMDRSVIVRHLLN-SSTDPFSRQPLFEDNLK 1027
              +  + P+     +   LM++PV +PSG+  DR  IV+HL      DP +R+PL E+ + 
Sbjct:   181 QN-REVPEMLCGKITLELMKEPVIVPSGITYDREEIVQHLRRIGHFDPVTRKPLTENEII 239

Query:  1028 PNEELKKKIE 1037
             PN  LK+ IE
Sbjct:   240 PNYALKEVIE 249


>UNIPROTKB|Q5ZHY5 [details] [associations]
            symbol:STUB1 "STIP1 homology and U box-containing protein
            1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
            complex" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006515 "misfolded or
            incompletely synthesized protein catabolic process" evidence=ISS]
            [GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
            process" evidence=ISS] [GO:0071218 "cellular response to misfolded
            protein" evidence=ISS] [GO:0042803 "protein homodimerization
            activity" evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase
            activity" evidence=ISS] [GO:0000209 "protein polyubiquitination"
            evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
            evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=ISS] InterPro:IPR001440 InterPro:IPR003613
            InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
            Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
            SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0042803
            GO:GO:0043161 GO:GO:0006281 Gene3D:1.25.40.10 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006515 GO:GO:0000209 GO:GO:0000151
            GO:GO:0071218 GO:GO:0034450 KO:K09561 EMBL:AJ720999 IPI:IPI00600865
            RefSeq:NP_001026577.1 UniGene:Gga.6217 ProteinModelPortal:Q5ZHY5
            SMR:Q5ZHY5 IntAct:Q5ZHY5 STRING:Q5ZHY5 GeneID:426918
            KEGG:gga:426918 CTD:10273 eggNOG:COG5113 HOVERGEN:HBG053046
            InParanoid:Q5ZHY5 OrthoDB:EOG4Z36F9 NextBio:20828310 Uniprot:Q5ZHY5
        Length = 314

 Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 55/228 (24%), Positives = 101/228 (44%)

Query:   819 ERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPK 878
             +R L  D +  +++  LG+  ++M +Y      E     +  Y L+     N      P 
Sbjct:    94 KRALELDGQSVKAHFFLGQCQMEMENY-----DEAIANLQRAYNLAKEQRLNFGDDI-PS 147

Query:   879 CNHLKVSSPDKYGWDPRRLLNQLVDIYLHLD---CDEFAAAIAQDERSFRKELFDDAADR 935
                L+++   ++     + +NQ  +++ +L      E    +A+  ++ ++E  D++  R
Sbjct:   148 A--LRIAKKKRWNSIEEKRINQENELHSYLTRLIMAEKERELAECRKAQQEENVDESRGR 205

Query:   936 MERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPS 995
             ++   I   +  DK+  LA      S  + K++    D PD     +   LM +P   PS
Sbjct:   206 VQLAGI--EAKHDKY--LADMDELFSQVDEKRKK--RDIPDYLCGKISFELMREPCITPS 259

Query:   996 GVVMDRSVIVRHLLN-SSTDPFSRQPLFEDNLKPNEELKKKIEAWKRE 1042
             G+  DR  I  HL      DP +R PL +D L PN  +K+ I+A+  E
Sbjct:   260 GITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFISE 307


>ASPGD|ASPL0000001660 [details] [associations]
            symbol:AN5906 species:162425 "Emericella nidulans"
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
            [GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000151
            "ubiquitin ligase complex" evidence=IEA] InterPro:IPR003613
            InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
            Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00504
            EMBL:BN001301 Gene3D:1.25.40.10 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000163725
            OMA:QENELHS EnsemblFungi:CADANIAT00007127 Uniprot:C8UZU5
        Length = 293

 Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
 Identities = 27/72 (37%), Positives = 40/72 (55%)

Query:   966 KKEVDYNDAPDEFRDPLMDTLMEDPVTLPSGVVMDRSVIVRHLLNSSTDPFSRQPLFEDN 1025
             K E+     PD   DP+   +M DPV +PSG   DR  I++++  S  DP +R P+  ++
Sbjct:   210 KGEIQERIVPDYLVDPITFEIMHDPVIVPSGTSFDRIGILKYVEQSGVDPITRTPMTVND 269

Query:  1026 LKPNEELKKKIE 1037
             L+PN  LK   E
Sbjct:   270 LRPNYALKAACE 281


>UNIPROTKB|J9NRV4 [details] [associations]
            symbol:STUB1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
            evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
            InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
            SMART:SM00504 Gene3D:1.25.40.10 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 OMA:QENELHS
            GeneTree:ENSGT00650000093277 EMBL:AAEX03004675
            Ensembl:ENSCAFT00000049790 Uniprot:J9NRV4
        Length = 231

 Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 56/232 (24%), Positives = 97/232 (41%)

Query:   813 EQQLSR-ERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNL 871
             EQ L+   R L  D +  +++  LG+  ++M  Y      E     +  Y L+     N 
Sbjct:     5 EQALADCRRALELDGQSVKAHFFLGQCQLEMESY-----DEAIANLQRAYNLAKEQRLNF 59

Query:   872 QQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDD 931
                  P    L+++   ++     R ++Q  +++ +L     A    + E   R    D+
Sbjct:    60 GDDI-PSA--LRIAKKKRWNSIEERRIHQENELHSYLTRLIVAERERELEECQRNHEGDE 116

Query:   932 AADRMERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPV 991
                 +  +Q  + +  DK+  LA      S  + K++    D PD     +   LM +P 
Sbjct:   117 DDGHVRAQQACIEAKHDKY--LADMDELFSQVDEKRKK--RDIPDYLCGKISFELMREPC 172

Query:   992 TLPSGVVMDRSVIVRHLLN-SSTDPFSRQPLFEDNLKPNEELKKKIEAWKRE 1042
               PSG+  DR  I  HL      DP +R PL ++ L PN  +K+ I+A+  E
Sbjct:   173 ITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISE 224


>UNIPROTKB|F1MUH4 [details] [associations]
            symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0004842 "ubiquitin-protein ligase activity"
            evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
            InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
            PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
            Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0004842 GO:GO:0000151 GeneTree:ENSGT00650000093277
            EMBL:DAAA02057282 IPI:IPI00714977 Ensembl:ENSBTAT00000057514
            ArrayExpress:F1MUH4 Uniprot:F1MUH4
        Length = 302

 Score = 128 (50.1 bits), Expect = 6.6e-05, P = 6.6e-05
 Identities = 56/232 (24%), Positives = 97/232 (41%)

Query:   813 EQQLSR-ERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNL 871
             EQ L+   R L  D +  +++  LG+  ++M  Y      E     +  Y L+     N 
Sbjct:    77 EQALADCRRALELDGQSVKAHFFLGQCQLEMESY-----DEAIANLQRAYNLAKEQRLNF 131

Query:   872 QQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDD 931
                  P    L+++   ++     R ++Q  +++ +L     A    + E   R    D+
Sbjct:   132 GDDI-PSA--LRIAKKKRWNSIEERRIHQENELHSYLTRLIVAERERELEECQRNHEGDE 188

Query:   932 AADRMERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPV 991
                 +  +Q  + +  DK+  LA      S  + K++    D PD     +   LM +P 
Sbjct:   189 DDSHIRAQQACIEAKHDKY--LADMDELFSQVDEKRKK--RDIPDYLCGKISFELMREPC 244

Query:   992 TLPSGVVMDRSVIVRHLLN-SSTDPFSRQPLFEDNLKPNEELKKKIEAWKRE 1042
               PSG+  DR  I  HL      DP +R PL ++ L PN  +K+ I+A+  E
Sbjct:   245 ITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISE 296


>UNIPROTKB|E1B7G3 [details] [associations]
            symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090035 "positive regulation of chaperone-mediated
            protein complex assembly" evidence=IEA] [GO:0071218 "cellular
            response to misfolded protein" evidence=IEA] [GO:0070534 "protein
            K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
            binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
            evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
            [GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
            ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0042803 "protein homodimerization activity" evidence=IEA]
            [GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
            "ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
            "positive regulation of proteasomal ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0031943 "regulation of
            glucocorticoid metabolic process" evidence=IEA] [GO:0031625
            "ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
            "positive regulation of protein ubiquitination" evidence=IEA]
            [GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
            "ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
            [GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
            "kinase binding" evidence=IEA] [GO:0006515 "misfolded or
            incompletely synthesized protein catabolic process" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
            complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
            InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
            Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
            SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
            Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
            GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
            GO:GO:0034450 OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
            GeneTree:ENSGT00650000093277 EMBL:DAAA02057282 IPI:IPI00714977
            Ensembl:ENSBTAT00000025473 ArrayExpress:E1B7G3 Uniprot:E1B7G3
        Length = 319

 Score = 128 (50.1 bits), Expect = 7.5e-05, P = 7.5e-05
 Identities = 56/232 (24%), Positives = 97/232 (41%)

Query:   813 EQQLSR-ERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNL 871
             EQ L+   R L  D +  +++  LG+  ++M  Y      E     +  Y L+     N 
Sbjct:    77 EQALADCRRALELDGQSVKAHFFLGQCQLEMESY-----DEAIANLQRAYNLAKEQRLNF 131

Query:   872 QQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDD 931
                  P    L+++   ++     R ++Q  +++ +L     A    + E   R    D+
Sbjct:   132 GDDI-PSA--LRIAKKKRWNSIEERRIHQENELHSYLTRLIVAERERELEECQRNHEGDE 188

Query:   932 AADRMERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPV 991
                 +  +Q  + +  DK+  LA      S  + K++    D PD     +   LM +P 
Sbjct:   189 DDSHIRAQQACIEAKHDKY--LADMDELFSQVDEKRKK--RDIPDYLCGKISFELMREPC 244

Query:   992 TLPSGVVMDRSVIVRHLLN-SSTDPFSRQPLFEDNLKPNEELKKKIEAWKRE 1042
               PSG+  DR  I  HL      DP +R PL ++ L PN  +K+ I+A+  E
Sbjct:   245 ITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISE 296


>DICTYBASE|DDB_G0282185 [details] [associations]
            symbol:DDB_G0282185 "U box domain-containing protein"
            species:44689 "Dictyostelium discoideum" [GO:0016567 "protein
            ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
            activity" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
            evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
            dictyBase:DDB_G0282185 EMBL:AAFI02000045 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 RefSeq:XP_640334.2
            EnsemblProtists:DDB0252889 GeneID:8623435 KEGG:ddi:DDB_G0282185
            Uniprot:Q54SX5
        Length = 790

 Score = 151 (58.2 bits), Expect = 8.9e-05, Sum P(3) = 8.9e-05
 Identities = 32/76 (42%), Positives = 48/76 (63%)

Query:   968 EVDYNDA--PDEFRDPLMDTLMEDPVTLPSGVVMDRSVIVRHLLNSS-TDPFSRQPLFED 1024
             E+ +N+A  P  F DP+   +M DPVTLPSG ++DRS I +H  N   TDP+S +P+   
Sbjct:   575 EIVFNEAGIPTTFLDPITLKMMSDPVTLPSGYIVDRSTIQKHFRNQYFTDPYSGKPITPS 634

Query:  1025 NLKPNEELKKKIEAWK 1040
             +++ N  L  KI+ +K
Sbjct:   635 DIQTNHLLCAKIKQFK 650

 Score = 39 (18.8 bits), Expect = 8.9e-05, Sum P(3) = 8.9e-05
 Identities = 23/97 (23%), Positives = 40/97 (41%)

Query:   155 QDLISQSLVELQDILLSKNNTCVLG----HYTASYARVFEEERNNPKKCSIFPFKDVLYE 210
             Q L+SQSL          + T +LG    H   S    +  + N+ +   +     V + 
Sbjct:   166 QQLLSQSLPSFHQ---QPSTTSLLGVNNHHADLSVIERYPTKMNH-QNLGVGNIGGVGFG 221

Query:   211 VRTQLVRHSIL-VLQSTNSDPMSSPLVKPLINQTLPN 246
              +  LV  S      S++S P S+   + ++ Q+L N
Sbjct:   222 KQNPLVNPSFSNSTSSSSSSPFSTSPSRVMLTQSLGN 258

 Score = 37 (18.1 bits), Expect = 8.9e-05, Sum P(3) = 8.9e-05
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query:   458 FHPNKSEMLSFKNDTRLKMSSQEVEDWLASLSSTAWREPKFSS 500
             F+ N   +LS     R++++S       A  +   W +P FS+
Sbjct:   359 FNSN-IHLLSRVKSIRIRVTSVSKSSCAALGAIELWGQPSFST 400


>UNIPROTKB|Q9UNE7 [details] [associations]
            symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
            species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IDA;IMP;TAS]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IMP] [GO:0000209 "protein polyubiquitination"
            evidence=IDA;IMP] [GO:0051865 "protein autoubiquitination"
            evidence=IDA] [GO:0042803 "protein homodimerization activity"
            evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
            evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
            evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
            [GO:0019899 "enzyme binding" evidence=IPI] [GO:0051879 "Hsp90
            protein binding" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0030544 "Hsp70 protein binding" evidence=IDA]
            [GO:0031398 "positive regulation of protein ubiquitination"
            evidence=IDA] [GO:0031943 "regulation of glucocorticoid metabolic
            process" evidence=IDA] [GO:0032436 "positive regulation of
            proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IDA] [GO:0030911 "TPR domain binding" evidence=IDA]
            [GO:0030674 "protein binding, bridging" evidence=TAS] [GO:0051604
            "protein maturation" evidence=TAS] [GO:0031371 "ubiquitin
            conjugating enzyme complex" evidence=TAS] [GO:0030579
            "ubiquitin-dependent SMAD protein catabolic process" evidence=IDA]
            [GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
            process" evidence=IDA] [GO:0046332 "SMAD binding" evidence=IDA]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0007179 "transforming
            growth factor beta receptor signaling pathway" evidence=TAS]
            [GO:0030512 "negative regulation of transforming growth factor beta
            receptor signaling pathway" evidence=TAS] [GO:0042405 "nuclear
            inclusion body" evidence=IDA] [GO:0051787 "misfolded protein
            binding" evidence=IDA] [GO:0071218 "cellular response to misfolded
            protein" evidence=IDA] [GO:0006515 "misfolded or incompletely
            synthesized protein catabolic process" evidence=IDA] [GO:0090035
            "positive regulation of chaperone-mediated protein complex
            assembly" evidence=IDA] [GO:0019900 "kinase binding" evidence=IPI]
            InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
            InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
            PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
            UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_111102
            Reactome:REACT_6900 GO:GO:0042803
            Pathway_Interaction_DB:alphasynuclein_pathway GO:GO:0043161
            GO:GO:0006281 GO:GO:0030674 EMBL:CH471112 Gene3D:1.25.40.10
            GO:GO:0046332 GO:GO:0007179 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0031398 GO:GO:0006515 GO:GO:0051879 GO:GO:0032436
            GO:GO:0051604 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
            GO:GO:0030512 GO:GO:0042405 GO:GO:0071218 GO:GO:0030544
            GO:GO:0034450 EMBL:AE006464 HOGENOM:HOG000163725 KO:K09561
            CTD:10273 eggNOG:COG5113 HOVERGEN:HBG053046 OrthoDB:EOG4Z36F9
            EMBL:AF039689 EMBL:AF129085 EMBL:AF432221 EMBL:AF217968 EMBL:Z92544
            EMBL:BC007545 EMBL:BC017178 EMBL:BC022788 EMBL:BC063617
            IPI:IPI00025156 IPI:IPI00645380 RefSeq:NP_005852.2
            UniGene:Hs.592081 ProteinModelPortal:Q9UNE7 SMR:Q9UNE7
            DIP:DIP-29752N IntAct:Q9UNE7 MINT:MINT-1132706 STRING:Q9UNE7
            PhosphoSite:Q9UNE7 DMDM:78099173 PaxDb:Q9UNE7 PRIDE:Q9UNE7
            DNASU:10273 Ensembl:ENST00000219548 Ensembl:ENST00000564370
            Ensembl:ENST00000565677 GeneID:10273 KEGG:hsa:10273 UCSC:uc002cit.3
            GeneCards:GC16P000736 H-InvDB:HIX0012661 HGNC:HGNC:11427 MIM:607207
            neXtProt:NX_Q9UNE7 PharmGKB:PA36227 InParanoid:Q9UNE7 OMA:QENELHS
            PhylomeDB:Q9UNE7 GenomeRNAi:10273 NextBio:38918 Bgee:Q9UNE7
            CleanEx:HS_STUB1 Genevestigator:Q9UNE7 GermOnline:ENSG00000103266
            GO:GO:0031371 GO:GO:0051787 GO:GO:0030911 GO:GO:0090035
            GO:GO:0031943 GO:GO:0030579 Uniprot:Q9UNE7
        Length = 303

 Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
 Identities = 55/232 (23%), Positives = 97/232 (41%)

Query:   813 EQQLSR-ERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNL 871
             EQ L+   R L  D +  +++  LG+  ++M  Y      E     +  Y L+     N 
Sbjct:    77 EQALADCRRALELDGQSVKAHFFLGQCQLEMESY-----DEAIANLQRAYSLAKEQRLNF 131

Query:   872 QQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDD 931
                  P    L+++   ++     R ++Q  +++ +L     A    + E   R    D+
Sbjct:   132 GDDI-PSA--LRIAKKKRWNSIEERRIHQESELHSYLSRLIAAERERELEECQRNHEGDE 188

Query:   932 AADRMERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPV 991
                 +  +Q  + +  DK+  +A      S  + K++    D PD     +   LM +P 
Sbjct:   189 DDSHVRAQQACIEAKHDKY--MADMDELFSQVDEKRKK--RDIPDYLCGKISFELMREPC 244

Query:   992 TLPSGVVMDRSVIVRHLLN-SSTDPFSRQPLFEDNLKPNEELKKKIEAWKRE 1042
               PSG+  DR  I  HL      DP +R PL ++ L PN  +K+ I+A+  E
Sbjct:   245 ITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISE 296


>UNIPROTKB|F1RG35 [details] [associations]
            symbol:STUB1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0090035 "positive regulation of chaperone-mediated
            protein complex assembly" evidence=IEA] [GO:0071218 "cellular
            response to misfolded protein" evidence=IEA] [GO:0070534 "protein
            K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
            binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
            evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
            [GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
            ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0042803 "protein homodimerization activity" evidence=IEA]
            [GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
            "ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
            "positive regulation of proteasomal ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0031943 "regulation of
            glucocorticoid metabolic process" evidence=IEA] [GO:0031625
            "ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
            "positive regulation of protein ubiquitination" evidence=IEA]
            [GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
            "ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
            [GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
            "kinase binding" evidence=IEA] [GO:0006515 "misfolded or
            incompletely synthesized protein catabolic process" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
            complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
            InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
            Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
            SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
            Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
            GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
            GO:GO:0034450 KO:K09561 OMA:QENELHS GO:GO:0090035 GO:GO:0031943
            GO:GO:0030579 GeneTree:ENSGT00650000093277 EMBL:FP016225
            RefSeq:XP_003124756.2 Ensembl:ENSSSCT00000008776 GeneID:100511251
            KEGG:ssc:100511251 Uniprot:F1RG35
        Length = 303

 Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
 Identities = 55/232 (23%), Positives = 97/232 (41%)

Query:   813 EQQLSR-ERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNL 871
             EQ L+   R L  D +  +++  LG+  ++M  Y      E     +  Y L+     N 
Sbjct:    77 EQALADCRRALELDSQSVKAHFFLGQCQLEMESY-----DEAIANLQRAYNLAKEQRLNF 131

Query:   872 QQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDD 931
                  P    L+++   ++     R ++Q  +++ +L     A    + E   R    ++
Sbjct:   132 GDDI-PSA--LRIAKKKRWNSIEERRIHQENELHSYLTRLIVAERERELEECQRNHEGEE 188

Query:   932 AADRMERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPV 991
                 +  +Q  + +  DK+  LA      S  + K++    D PD     +   LM +P 
Sbjct:   189 DDGHIRAQQACIEAKHDKY--LADMDELFSQVDEKRKK--RDIPDYLCGKISFELMREPC 244

Query:   992 TLPSGVVMDRSVIVRHLLN-SSTDPFSRQPLFEDNLKPNEELKKKIEAWKRE 1042
               PSG+  DR  I  HL      DP +R PL ++ L PN  +K+ I+A+  E
Sbjct:   245 ITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISE 296


>RGD|1306167 [details] [associations]
            symbol:Stub1 "STIP1 homology and U-box containing protein 1, E3
            ubiquitin protein ligase" species:10116 "Rattus norvegicus"
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
            [GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
            evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=ISO] [GO:0006515 "misfolded or
            incompletely synthesized protein catabolic process"
            evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=ISO]
            [GO:0019900 "kinase binding" evidence=IEA;ISO] [GO:0030544 "Hsp70
            protein binding" evidence=IEA;ISO] [GO:0030579 "ubiquitin-dependent
            SMAD protein catabolic process" evidence=IEA;ISO] [GO:0030911 "TPR
            domain binding" evidence=IEA;ISO] [GO:0031398 "positive regulation
            of protein ubiquitination" evidence=IEA;ISO] [GO:0031625 "ubiquitin
            protein ligase binding" evidence=IEA;ISO] [GO:0031943 "regulation
            of glucocorticoid metabolic process" evidence=IEA;ISO] [GO:0032436
            "positive regulation of proteasomal ubiquitin-dependent protein
            catabolic process" evidence=IEA;ISO] [GO:0034450
            "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO] [GO:0042405
            "nuclear inclusion body" evidence=IEA;ISO] [GO:0042803 "protein
            homodimerization activity" evidence=IEA;ISO] [GO:0043161
            "proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IEA;ISO] [GO:0046332 "SMAD binding" evidence=IEA;ISO]
            [GO:0051787 "misfolded protein binding" evidence=IEA;ISO]
            [GO:0051865 "protein autoubiquitination" evidence=IEA;ISO]
            [GO:0051879 "Hsp90 protein binding" evidence=IEA;ISO] [GO:0070534
            "protein K63-linked ubiquitination" evidence=IEA;ISO] [GO:0071218
            "cellular response to misfolded protein" evidence=IEA;ISO]
            [GO:0090035 "positive regulation of chaperone-mediated protein
            complex assembly" evidence=IEA;ISO] InterPro:IPR001440
            InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
            InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
            PROSITE:PS50293 SMART:SM00028 SMART:SM00504 RGD:1306167
            GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515 GO:GO:0032436
            EMBL:CH473948 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
            GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 KO:K09561 CTD:10273
            OrthoDB:EOG4Z36F9 OMA:QENELHS GO:GO:0090035 GO:GO:0031943
            GO:GO:0030579 GeneTree:ENSGT00650000093277 IPI:IPI00203158
            RefSeq:NP_001020796.2 UniGene:Rn.6504 Ensembl:ENSRNOT00000026921
            GeneID:287155 KEGG:rno:287155 UCSC:RGD:1306167 NextBio:625631
            Uniprot:D4A4T0
        Length = 304

 Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
 Identities = 54/232 (23%), Positives = 98/232 (42%)

Query:   813 EQQLSR-ERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNL 871
             EQ L+   R L  D +  +++  LG+  ++M  Y      E     +  Y L+     N 
Sbjct:    78 EQALADCRRALELDGQSVKAHFFLGQCQLEMESY-----DEAIANLQRAYSLAKEQRLNF 132

Query:   872 QQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDD 931
                  P    L+++   ++     R ++Q  +++ +L     A    + E   R    D+
Sbjct:   133 GDDI-PSA--LRIAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGDE 189

Query:   932 AADRMERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPV 991
                 +  +Q  + +  DK+ A     +E+  + + ++    D PD     +   LM +P 
Sbjct:   190 DDGHIRAQQACIEAKHDKYMA---DMNEL-FSQVDEKRKKRDIPDYLCGKISFELMREPC 245

Query:   992 TLPSGVVMDRSVIVRHLLN-SSTDPFSRQPLFEDNLKPNEELKKKIEAWKRE 1042
               PSG+  DR  I  HL      DP +R PL ++ L PN  +K+ I+A+  E
Sbjct:   246 ITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISE 297


>UNIPROTKB|F1P105 [details] [associations]
            symbol:STUB1 "STIP1 homology and U box-containing protein
            1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
            complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0006515 "misfolded or incompletely synthesized protein
            catabolic process" evidence=IEA] [GO:0019900 "kinase binding"
            evidence=IEA] [GO:0030544 "Hsp70 protein binding" evidence=IEA]
            [GO:0030579 "ubiquitin-dependent SMAD protein catabolic process"
            evidence=IEA] [GO:0030911 "TPR domain binding" evidence=IEA]
            [GO:0031398 "positive regulation of protein ubiquitination"
            evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
            evidence=IEA] [GO:0031943 "regulation of glucocorticoid metabolic
            process" evidence=IEA] [GO:0032436 "positive regulation of
            proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
            evidence=IEA] [GO:0042405 "nuclear inclusion body" evidence=IEA]
            [GO:0042803 "protein homodimerization activity" evidence=IEA]
            [GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA]
            [GO:0051787 "misfolded protein binding" evidence=IEA] [GO:0051865
            "protein autoubiquitination" evidence=IEA] [GO:0051879 "Hsp90
            protein binding" evidence=IEA] [GO:0070534 "protein K63-linked
            ubiquitination" evidence=IEA] [GO:0071218 "cellular response to
            misfolded protein" evidence=IEA] [GO:0090035 "positive regulation
            of chaperone-mediated protein complex assembly" evidence=IEA]
            InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
            InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
            SMART:SM00504 GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515
            GO:GO:0032436 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
            GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 IPI:IPI00600865
            OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
            GeneTree:ENSGT00650000093277 EMBL:AADN02049413 EMBL:AADN02049414
            Ensembl:ENSGALT00000001529 Uniprot:F1P105
        Length = 251

 Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
 Identities = 53/228 (23%), Positives = 96/228 (42%)

Query:   819 ERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPK 878
             +R L  D +  +++  LG+  ++M +Y      E     +  Y L+     N      P 
Sbjct:    31 KRALELDGQSVKAHFFLGQCQMEMENY-----DEAIANLQRAYNLAKEQRLNFGDDI-PS 84

Query:   879 CNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSF---RKELFDDAADR 935
                L+++   ++     + +NQ  +++ +L        +A+ ER     RK   ++  D 
Sbjct:    85 A--LRIAKKKRWNSIEEKRINQENELHSYLT----RLIMAEKERELAECRKAQQEENVDE 138

Query:   936 MERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPS 995
               R ++ L     K   L     ++  + + ++    D PD     +   LM +P   PS
Sbjct:   139 -SRGRVQLAGIEAKHLKLQCGGIQL-FSQVDEKRKKRDIPDYLCGKISFELMREPCITPS 196

Query:   996 GVVMDRSVIVRHLLN-SSTDPFSRQPLFEDNLKPNEELKKKIEAWKRE 1042
             G+  DR  I  HL      DP +R PL +D L PN  +K+ I+A+  E
Sbjct:   197 GITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFISE 244


>UNIPROTKB|H3BTA3 [details] [associations]
            symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
            species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
            evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
            evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
            EMBL:Z92544 HGNC:HGNC:11427 Ensembl:ENST00000564316 Uniprot:H3BTA3
        Length = 157

 Score = 111 (44.1 bits), Expect = 0.00020, P = 0.00020
 Identities = 27/84 (32%), Positives = 41/84 (48%)

Query:   960 ISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSGVVMDRSVIVRHLLN-SSTDPFSR 1018
             I   ++ ++    D PD     +   LM +P   PSG+  DR  I  HL      DP +R
Sbjct:    67 IEAKHVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTR 126

Query:  1019 QPLFEDNLKPNEELKKKIEAWKRE 1042
              PL ++ L PN  +K+ I+A+  E
Sbjct:   127 SPLTQEQLIPNLAMKEVIDAFISE 150


>UNIPROTKB|G4MXP4 [details] [associations]
            symbol:MGG_08035 "E3 ubiquitin-protein ligase CHIP"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR003613 InterPro:IPR011990
            InterPro:IPR013026 Pfam:PF04564 PROSITE:PS50293 SMART:SM00504
            Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0004842 InterPro:IPR013105 Pfam:PF07719 GO:GO:0043581
            GO:GO:0000151 EMBL:CM001232 KO:K09561 RefSeq:XP_003714988.1
            ProteinModelPortal:G4MXP4 EnsemblFungi:MGG_08035T0 GeneID:2678421
            KEGG:mgr:MGG_08035 Uniprot:G4MXP4
        Length = 284

 Score = 118 (46.6 bits), Expect = 0.00075, P = 0.00075
 Identities = 26/68 (38%), Positives = 38/68 (55%)

Query:   975 PDEFRDPLMDTLMEDPVTLPSGVVMDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKK 1034
             P+   D +   +M DPV   SG   +R  I+ HL  + TDP +R+PL   +L+PN  LK+
Sbjct:   210 PEWAIDEISFGVMVDPVVTKSGKSYERDTILTHLKTNQTDPITREPLHPSDLRPNLALKE 269

Query:  1035 KIEAWKRE 1042
               EA+  E
Sbjct:   270 ACEAFLDE 277


>TAIR|locus:2079706 [details] [associations]
            symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
            thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
            [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0016567 "protein ubiquitination"
            evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0070696 "transmembrane receptor protein serine/threonine kinase
            binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
            acid stimulus" evidence=IMP] [GO:0046777 "protein
            autophosphorylation" evidence=RCA] InterPro:IPR003613
            InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
            UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
            Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
            EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
            IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
            ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
            PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
            KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
            InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
            ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
        Length = 460

 Score = 121 (47.7 bits), Expect = 0.00085, P = 0.00085
 Identities = 43/142 (30%), Positives = 70/142 (49%)

Query:   909 DCDEFAAAIAQD-ERSFRKELF--DDAADRMERRQILLPSSLDKFRALASRAHEISVANI 965
             D D  A A A++ +R  +K L   DD  D   +    L  +L   R    R  +++ ++ 
Sbjct:     8 DSDPTAIAKAKELKREMKKLLIKIDDEDDLGVQTIDQLQDALSALREATMR--KMAKSSS 65

Query:   966 KKEVDYNDAPDEFRDPLMDTLMEDPVTLPSGVVMDRSVIVRHLLNSS-TDPFSRQPLFED 1024
              + ++    P+EFR PL + LM DPV L SG   D+  I + L + + T P ++Q L   
Sbjct:    66 LEMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHT 125

Query:  1025 NLKPNEELKKKIEAW-KREKIE 1045
              L PN  +++ I  W K+  +E
Sbjct:   126 ALTPNLLIREMISKWCKKNGLE 147


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.387    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0     1046      1032   0.00081  123 3  11 22  0.38    34
                                                     38  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  48
  No. of states in DFA:  629 (67 KB)
  Total size of DFA:  462 KB (2218 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  96.16u 0.16s 96.32t   Elapsed:  00:00:12
  Total cpu time:  96.19u 0.16s 96.35t   Elapsed:  00:00:12
  Start:  Thu Aug 15 16:41:28 2013   End:  Thu Aug 15 16:41:40 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with ube4b ube4b ube4b ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)	gene_product from Danio rerio	1.7e-237
BLAST match view associations BLAST with UBE4B UBE4B UBE4B Uncharacterized protein	protein from Canis lupus familiaris	1.3e-228
BLAST match view associations BLAST with UBE4B UBE4B UBE4B Uncharacterized protein	protein from Canis lupus familiaris	1.3e-228
BLAST match view associations BLAST with Gga.49012 Gga.49012 Gga.49012 Uncharacterized protein	protein from Gallus gallus	2.3e-227
BLAST match view associations BLAST with UBE4B UBE4B UBE4B Ubiquitin conjugation factor E4 B	protein from Homo sapiens	4.9e-227
BLAST match view associations BLAST with UBE4B UBE4B UBE4B UBE4B protein	protein from Bos taurus	6.2e-227
BLAST match view associations BLAST with UBE4B UBE4B UBE4B Uncharacterized protein	protein from Canis lupus familiaris	1.0e-226
BLAST match view associations BLAST with Ube4b Ube4b Ube4b ubiquitination factor E4B	gene from Rattus norvegicus	8.1e-225
BLAST match view associations BLAST with CG9934 CG9934 CG9934	protein from Drosophila melanogaster	2.9e-207
BLAST match view associations BLAST with F1RIG2 F1RIG2 F1RIG2 Uncharacterized protein	protein from Sus scrofa	2.8e-120
BLAST match view associations BLAST with ufd-2 ufd-2 ufd-2	gene from Caenorhabditis elegans	1.0e-100
BLAST match view associations BLAST with ufd-2 ufd-2 ufd-2 Protein UFD-2, isoform b	protein from Caenorhabditis elegans	1.0e-100
BLAST match view associations BLAST with AT5G15400 AT5G15400 AT5G15400	protein from Arabidopsis thaliana	6.0e-99
BLAST match view associations BLAST with nosA nosA nosA U box domain-containing protein	gene from Dictyostelium discoideum	4.5e-98
BLAST match view associations BLAST with UBE4B UBE4B UBE4B Uncharacterized protein	protein from Sus scrofa	1.5e-92
BLAST match view associations BLAST with UFD2 UFD2 UFD2 Ubiquitin chain assembly factor (E4)	gene from Saccharomyces cerevisiae	2.6e-86
BLAST match view associations BLAST with orf19.5965 orf19.5965 orf19.5965	gene_product from Candida albicans	6.5e-85
BLAST match view associations BLAST with UBE4A UBE4A UBE4A Ubiquitin conjugation factor E4 A	protein from Homo sapiens	1.4e-64
BLAST match view associations BLAST with UBE4A UBE4A UBE4A Ubiquitin conjugation factor E4 A	protein from Bos taurus	1.4e-64
BLAST match view associations BLAST with Ube4a Ube4a Ube4a ubiquitination factor E4A	gene from Rattus norvegicus	6.2e-62
BLAST match view associations BLAST with CG11070 CG11070 CG11070	protein from Drosophila melanogaster	8.8e-62
BLAST match view associations BLAST with UBE4A UBE4A UBE4A Uncharacterized protein	protein from Gallus gallus	1.3e-56
BLAST match view associations BLAST with UBE4A UBE4A UBE4A Ubiquitin conjugation factor E4 A	protein from Homo sapiens	3.1e-55
BLAST match view associations BLAST with UBE4A UBE4A UBE4A Uncharacterized protein	protein from Canis lupus familiaris	8.8e-54
BLAST match view associations BLAST with UBE4A UBE4A UBE4A Uncharacterized protein	protein from Sus scrofa	1.5e-53
BLAST match view associations BLAST with ube4a ube4a ube4a ubiquitination factor E4A (UFD2 homolog, yeast)	gene_product from Danio rerio	7.0e-53
BLAST match view associations BLAST with UBE4A UBE4A UBE4A Uncharacterized protein	protein from Gallus gallus	6.1e-48
BLAST match view associations BLAST with UBE4B UBE4B UBE4B Ubiquitin conjugation factor E4 B	protein from Homo sapiens	1.0e-39
BLAST match view associations BLAST with UBE4B UBE4B UBE4B Ubiquitin conjugation factor E4 B	protein from Homo sapiens	5.1e-26
BLAST match view associations BLAST with chn-1 chn-1 chn-1	gene from Caenorhabditis elegans	4.5e-06
BLAST match view associations BLAST with STUB1 STUB1 STUB1 STIP1 homology and U box-containing protein 1	protein from Gallus gallus	2.0e-05
BLAST match view associations BLAST with STUB1 STUB1 STUB1 Uncharacterized protein	protein from Canis lupus familiaris	3.8e-05
BLAST match view associations BLAST with STUB1 STUB1 STUB1 Uncharacterized protein	protein from Bos taurus	6.6e-05
BLAST match view associations BLAST with STUB1 STUB1 STUB1 Uncharacterized protein	protein from Bos taurus	7.5e-05
BLAST match view associations BLAST with DDB_G0282185 DDB_G0282185 DDB_G0282185 U box domain-containing protein	gene from Dictyostelium discoideum	8.9e-05
BLAST match view associations BLAST with STUB1 STUB1 STUB1 E3 ubiquitin-protein ligase CHIP	protein from Homo sapiens	0.00011
BLAST match view associations BLAST with LOC100511251 LOC100511251 LOC100511251 Uncharacterized protein	protein from Sus scrofa	0.00014
BLAST match view associations BLAST with Stub1 Stub1 Stub1 STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase	gene from Rattus norvegicus	0.00019
BLAST match view associations BLAST with STUB1 STUB1 STUB1 E3 ubiquitin-protein ligase CHIP	protein from Homo sapiens	0.00020
BLAST match view associations BLAST with MGG_08035 MGG_08035 MGG_08035 E3 ubiquitin-protein ligase CHIP	protein from Magnaporthe oryzae 70-15	0.00075
BLAST match view associations BLAST with PUB9 PUB9 PUB9 plant U-box 9	protein from Arabidopsis thaliana	0.00085