BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14916
(130 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P12613|TCPA_DROME T-complex protein 1 subunit alpha OS=Drosophila melanogaster
GN=T-cp1 PE=2 SV=2
Length = 557
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 103/128 (80%), Positives = 118/128 (92%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
F ++L SREQLAIAEFA+SLLVIPKTL+VNAA+D+TDLVAKLR+YHNSSQTK ++ DLKW
Sbjct: 429 FATSLASREQLAIAEFAKSLLVIPKTLSVNAAKDATDLVAKLRSYHNSSQTKPERSDLKW 488
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQGGRSYKN 121
GLDL+EGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKL+PE + G+SY +
Sbjct: 489 TGLDLIEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLNPEDKSGKSYAD 548
Query: 122 AYDSGELD 129
A +GELD
Sbjct: 549 ACAAGELD 556
>sp|P11983|TCPA_MOUSE T-complex protein 1 subunit alpha OS=Mus musculus GN=Tcp1 PE=1 SV=3
Length = 556
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/130 (68%), Positives = 107/130 (82%), Gaps = 2/130 (1%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ +++ SREQLAIAEFARSLLVIP TLAVNAAQDSTDLVAKLRA+HN +Q ++ +LKW
Sbjct: 426 YATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKW 485
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQGGR--SY 119
+GLDL+ G RDNK+AGV EP + K+KSLKFATEAAITILRIDD+IKL PE + + SY
Sbjct: 486 IGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDKHGSY 545
Query: 120 KNAYDSGELD 129
+NA SG LD
Sbjct: 546 ENAVHSGALD 555
>sp|P18279|TCPA_CRIGR T-complex protein 1 subunit alpha OS=Cricetulus griseus GN=TCP1
PE=2 SV=1
Length = 556
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/130 (68%), Positives = 107/130 (82%), Gaps = 2/130 (1%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ +++ SREQLAIAEFARSLLVIP TLAVNAAQDSTDLVAKLRA+HN +Q ++ +LKW
Sbjct: 426 YATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKW 485
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQGGR--SY 119
+GLDL+ G RDNK+AGV EP + K+KSLKFATEAAITILRIDD+IKL PE + + SY
Sbjct: 486 IGLDLINGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPETKDDKHGSY 545
Query: 120 KNAYDSGELD 129
+NA SG LD
Sbjct: 546 ENAVHSGALD 555
>sp|P50157|TCPA_AMBME T-complex protein 1 subunit alpha (Fragment) OS=Ambystoma mexicanum
PE=2 SV=1
Length = 173
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/129 (69%), Positives = 106/129 (82%), Gaps = 1/129 (0%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ +++ SREQLAIAEFARSLLVIPKTLAVN AQDSTDLVAKLRA+HN +Q D+ +LKW
Sbjct: 44 YATSMGSREQLAIAEFARSLLVIPKTLAVNRAQDSTDLVAKLRAFHNEAQVNPDRKNLKW 103
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQG-GRSYK 120
+GLDL+ G RDNK+AGV EP M K KSLKFATEAAITILRIDD+IKL PE G+SY+
Sbjct: 104 IGLDLVNGKARDNKQAGVFEPTMVKTKSLKFATEAAITILRIDDLIKLYPESNDKGQSYQ 163
Query: 121 NAYDSGELD 129
+A SG L+
Sbjct: 164 DAVRSGSLE 172
>sp|P28480|TCPA_RAT T-complex protein 1 subunit alpha OS=Rattus norvegicus GN=Tcp1 PE=1
SV=1
Length = 556
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/132 (68%), Positives = 107/132 (81%), Gaps = 6/132 (4%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ +++ SREQLAIAEFARSLLVIP TLAVNAAQDSTDLVAKLRA+HN +Q ++ +LKW
Sbjct: 426 YATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKW 485
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPE----QQGGR 117
+GLDL+ G RDNK+AGV EP + K+KSLKFATEAAITILRIDD+IKL PE + GG
Sbjct: 486 IGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDKHGG- 544
Query: 118 SYKNAYDSGELD 129
Y+NA SG LD
Sbjct: 545 -YENAVHSGALD 555
>sp|Q4R5G2|TCPA_MACFA T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1
PE=2 SV=1
Length = 556
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/130 (66%), Positives = 106/130 (81%), Gaps = 2/130 (1%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ +++ SREQLAIAEFARSLLVIP TLAVNAAQDSTDLVAKLRA+HN +Q ++ +LKW
Sbjct: 426 YATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKW 485
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQGGR--SY 119
+GLDL G RDNK+AGV EP + K+KSLKFATEAAITILRIDD+IKL PE + + SY
Sbjct: 486 IGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDKHGSY 545
Query: 120 KNAYDSGELD 129
++A SG L+
Sbjct: 546 EDAVHSGALN 555
>sp|P17987|TCPA_HUMAN T-complex protein 1 subunit alpha OS=Homo sapiens GN=TCP1 PE=1 SV=1
Length = 556
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/130 (66%), Positives = 106/130 (81%), Gaps = 2/130 (1%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ +++ SREQLAIAEFARSLLVIP TLAVNAAQDSTDLVAKLRA+HN +Q ++ +LKW
Sbjct: 426 YATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKW 485
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQGGR--SY 119
+GLDL G RDNK+AGV EP + K+KSLKFATEAAITILRIDD+IKL PE + + SY
Sbjct: 486 IGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDKHGSY 545
Query: 120 KNAYDSGELD 129
++A SG L+
Sbjct: 546 EDAVHSGALN 555
>sp|Q9XT06|TCPA_MONDO T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1
PE=2 SV=1
Length = 557
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/131 (64%), Positives = 106/131 (80%), Gaps = 3/131 (2%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ +++ SREQLAIAEFARSLL+IP TLAVNAAQDSTDLVAKLRA+HN +Q ++ +LKW
Sbjct: 426 YATSMGSREQLAIAEFARSLLIIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKW 485
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQG---GRS 118
+GLDL+ G RDN++ GV EP M K+KSLKFATEAAITILRIDD+IKL PE + G +
Sbjct: 486 IGLDLVNGKPRDNRQTGVFEPTMVKVKSLKFATEAAITILRIDDLIKLHPESKDDKRGGT 545
Query: 119 YKNAYDSGELD 129
Y++A SG ++
Sbjct: 546 YEDAVHSGAIE 556
>sp|Q32L40|TCPA_BOVIN T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=1 SV=1
Length = 556
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 106/132 (80%), Gaps = 6/132 (4%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ +++ SREQLAIAEFARSL VIP TLAVNAAQDSTDLVAKLRA+HN +Q ++ +LKW
Sbjct: 426 YATSMGSREQLAIAEFARSLPVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKW 485
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPE----QQGGR 117
+GLDL+ G RDNK+AGV EP + K+KSLKFATEAAITILRIDD+IKL PE + GG
Sbjct: 486 IGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDKHGG- 544
Query: 118 SYKNAYDSGELD 129
Y++A SG LD
Sbjct: 545 -YEDAVHSGALD 555
>sp|Q9W790|TCPA_PALPA T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus
GN=TCP1 PE=2 SV=1
Length = 559
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 85/130 (65%), Positives = 105/130 (80%), Gaps = 2/130 (1%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ +++ SREQLAIAEFARSLL+IP TLAVNAAQD+TDLVAKLRA+HN +Q ++ +LKW
Sbjct: 429 YATSMGSREQLAIAEFARSLLIIPNTLAVNAAQDATDLVAKLRAFHNEAQVNPERKNLKW 488
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQG--GRSY 119
+GLDL+ G RDNK+AGV EP + K KSLKFATEAAITILRIDD+IKL PE + G Y
Sbjct: 489 IGLDLINGKPRDNKQAGVFEPTLVKTKSLKFATEAAITILRIDDLIKLHPESKDDKGGCY 548
Query: 120 KNAYDSGELD 129
++A SG L+
Sbjct: 549 EDAVRSGALE 558
>sp|P41988|TCPA_CAEEL T-complex protein 1 subunit alpha OS=Caenorhabditis elegans
GN=cct-1 PE=3 SV=2
Length = 549
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/115 (67%), Positives = 94/115 (81%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ L+SREQLA+AEFA +LL+IPK LA NAA+DSTDLV KLRAYH+ +Q LKW
Sbjct: 429 YAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDLVTKLRAYHSKAQLIPQLQHLKW 488
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQGG 116
GLDL EG +RDNK+AG+LEPA+SK+KSLKFATEAAITILRIDD+IKLD ++ G
Sbjct: 489 AGLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLIKLDKQEPLG 543
>sp|P28769|TCPA_ARATH T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1
PE=2 SV=1
Length = 545
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 75/115 (65%), Positives = 95/115 (82%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ L SREQLAIAEFA +LL+IPK LAVNAA+D+T+LVAKLRAYH+++QTK DK
Sbjct: 429 LATTLGSREQLAIAEFADALLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHYSS 488
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQGG 116
+GLDL+ G +R+N +AGV+EPAMSK+K ++FATEAAITILRIDDMIKL ++ G
Sbjct: 489 MGLDLVNGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDESQG 543
>sp|O94501|TCPA_SCHPO T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cct1 PE=3 SV=1
Length = 556
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/117 (68%), Positives = 93/117 (79%), Gaps = 4/117 (3%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQ----TKKDKV 57
F ++L SREQLAIAEFA++LL+IP+TLAVNAA+DST+L AKLRAYH +SQ T K
Sbjct: 431 FATSLGSREQLAIAEFAQALLIIPRTLAVNAAKDSTELTAKLRAYHAASQNAEVTDVKKR 490
Query: 58 DLKWVGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQ 114
K GLDLL GV+RDN KAGVLEP+MSK+KSLK A EA I ILRID IKLDPE+Q
Sbjct: 491 GYKNYGLDLLNGVIRDNVKAGVLEPSMSKLKSLKSAVEACIAILRIDTSIKLDPERQ 547
>sp|Q94757|TCPA_SCHMA T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A
PE=2 SV=1
Length = 545
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 89/113 (78%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ L+SREQLAIAEFAR++L IPK LAVNA DST+LVA+LR+ HNSSQ+K D+ KW
Sbjct: 423 YALTLSSREQLAIAEFARAMLSIPKQLAVNAGVDSTELVARLRSCHNSSQSKPDQAHNKW 482
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQ 114
GLDL V D K+ GV EP +SKIKSLKFATEAAITILRIDD+IKL E+Q
Sbjct: 483 WGLDLNNQYVADCKEIGVFEPLVSKIKSLKFATEAAITILRIDDLIKLKEEKQ 535
>sp|Q55BM4|TCPA_DICDI T-complex protein 1 subunit alpha OS=Dictyostelium discoideum
GN=tcp1 PE=2 SV=1
Length = 548
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/116 (62%), Positives = 92/116 (79%), Gaps = 1/116 (0%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + SR+QLAI+EFA SLLV+PK LAVNAA D++DLV+KL+AYH+++QT K +
Sbjct: 426 IAATMGSRKQLAISEFAESLLVVPKQLAVNAALDASDLVSKLKAYHHAAQTDPSKKSYAY 485
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDP-EQQGG 116
GLDL VR+N +AGVLEPA++KIK +KFATE+AITILRIDD I L+P EQQGG
Sbjct: 486 SGLDLFNNKVRNNLEAGVLEPAIAKIKCIKFATESAITILRIDDKITLNPREQQGG 541
>sp|O15891|TCPA_TETPY T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3
SV=1
Length = 547
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/115 (63%), Positives = 90/115 (78%), Gaps = 2/115 (1%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKD--KVDL 59
F L ++EQ A+AEF +L +IPK LA NAAQD+T+LV+KLRA H +SQ+ D K +L
Sbjct: 426 FARTLGTKEQTAVAEFCEALNIIPKVLAANAAQDATELVSKLRALHAASQSSDDPAKKEL 485
Query: 60 KWVGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQ 114
K GLDL G VR+N KAGVLEP +SKIKSL+FATEAAITILRIDDMIKL+P+ +
Sbjct: 486 KNCGLDLSLGKVRNNVKAGVLEPMVSKIKSLRFATEAAITILRIDDMIKLNPQNE 540
>sp|P12612|TCPA_YEAST T-complex protein 1 subunit alpha OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TCP1 PE=1 SV=2
Length = 559
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 87/116 (75%), Gaps = 6/116 (5%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
F + + SREQLAIAEFA +LL+IPKTLAVNAA+DS++LVAKLR+YH +SQ K + D+K
Sbjct: 436 FATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPE-DVKR 494
Query: 62 -----VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPE 112
GLDL+ G + D AGVLEP +SK+KSLK A EA + ILRID MI +DPE
Sbjct: 495 RSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDPE 550
>sp|Q8SSC9|TCPA_ENCCU T-complex protein 1 subunit alpha OS=Encephalitozoon cuniculi
(strain GB-M1) GN=TCP1 PE=1 SV=1
Length = 540
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 79/117 (67%), Gaps = 12/117 (10%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKL-----RAYHNSSQTKKDK 56
F +NS+E +AI +A SLL IPK L+ NA DS +LVA L R NSS +K
Sbjct: 428 FAFTVNSKEHVAIHRYAESLLSIPKILSTNAGLDSNELVANLLSSQSREMANSSGSK--- 484
Query: 57 VDLKWVGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQ 113
++G+D+ G ++DN + G++EP+++K+KSLK ATEAAI+ILRI+++I L P+Q
Sbjct: 485 ----FLGIDVTSGKIQDNFEFGIIEPSVNKMKSLKAATEAAISILRINEVIILPPDQ 537
>sp|O26320|THSA_METTH Thermosome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsA PE=3 SV=2
Length = 542
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 68/106 (64%), Gaps = 9/106 (8%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ ++ REQLA++ FA +L ++PKTLA NA DS D++ LRA H S +
Sbjct: 418 YADTISGREQLAVSAFADALEIVPKTLAENAGLDSIDVLVDLRAAHEES---------PY 468
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
+G+D+ +G + D K+AGV+EP K ++++ A EAA ILRIDDMI
Sbjct: 469 MGIDVFDGNIVDMKEAGVIEPQRVKKQAIQSAAEAAEMILRIDDMI 514
>sp|O26885|THSB_METTH Thermosome subunit beta OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsB PE=3 SV=1
Length = 538
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 69/106 (65%), Gaps = 9/106 (8%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ +++ REQLA++ FA +L ++PKTLA NA DS D++ LRA H S +
Sbjct: 418 YADSISGREQLAVSAFAEALEIVPKTLAENAGLDSIDVLVDLRAAHEES---------TY 468
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
+G+D+ +G + D K+AGV+EP K ++++ A EAA ILRIDD+I
Sbjct: 469 MGIDVFDGKIVDMKEAGVIEPHRVKKQAIQSAAEAAEMILRIDDVI 514
>sp|O28821|THSB_ARCFU Thermosome subunit beta OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsB PE=3 SV=1
Length = 545
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 8/106 (7%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ +L REQLA+ FA +L +IP+TLA NA D D++ +L+A H Q K+
Sbjct: 425 WAPSLGGREQLAVEAFATALEIIPRTLAENAGLDPIDVLVELKAAHEKGQ--------KY 476
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
G+D+ G V D K+ GV EP K +++ ATE A+ ILRIDD+I
Sbjct: 477 AGVDVDTGKVVDMKERGVFEPLRVKTQAIGSATEVAVMILRIDDII 522
>sp|P50016|THS_METKA Thermosome subunit OS=Methanopyrus kandleri (strain AV19 / DSM 6324
/ JCM 9639 / NBRC 100938) GN=ths PE=3 SV=1
Length = 545
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
F + REQLA+ FA +L +IP+TLA N+ D D++ +LRA H Q
Sbjct: 427 FADGVEGREQLAVEAFADALEIIPRTLAENSGLDPIDVLVQLRAKHEDGQV--------T 478
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
G+D+ +G V+D + GV+EP K ++L ATEAA ILRIDD+I
Sbjct: 479 AGIDVYDGDVKDMLEEGVVEPLRVKTQALASATEAAEMILRIDDVI 524
>sp|Q9HN70|THSA_HALSA Thermosome subunit alpha OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=thsA PE=3 SV=2
Length = 562
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 8/106 (7%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
F ++ REQLA+ FA +L VIP+TLA NA D D + LR+ H+ T+
Sbjct: 422 FADSVGGREQLAVEAFADALEVIPRTLAENAGHDPIDSLVDLRSQHDGGDTE-------- 473
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
GLD G V D + G++EP K ++++ ATEAA ILRIDD+I
Sbjct: 474 AGLDAYNGDVIDMESEGIVEPLRVKTQAIESATEAATMILRIDDVI 519
>sp|Q58405|THS_METJA Thermosome subunit OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=ths PE=3 SV=1
Length = 542
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 66/106 (62%), Gaps = 7/106 (6%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
F ++ REQLA+ FA +L VIP+TLA N+ D D++ KLRA H +K +
Sbjct: 422 FAESVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAH-------EKEGGEV 474
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
GLD+ EG V D + GV+EP K +++ ATEA++ +LRIDD+I
Sbjct: 475 YGLDVFEGEVVDMLEKGVVEPLKVKTQAIDSATEASVMLLRIDDVI 520
>sp|Q9HNI0|THSB_HALSA Thermosome subunit beta OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=thsB PE=3 SV=2
Length = 556
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 68/106 (64%), Gaps = 7/106 (6%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
F +++ REQLA+ FA SL ++P+ LA NA DS D + LR+ H + D +
Sbjct: 427 FADSVSGREQLAVEAFADSLELVPRVLAENAGLDSIDTLVDLRSAHEND-------DDEH 479
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
+GL++L G + D +AGV+EPA +K +++ A+EAA +L+IDD+I
Sbjct: 480 IGLNVLSGDLEDTFEAGVVEPAHAKEQAVTSASEAANLVLKIDDII 525
>sp|O30561|THS1_HALVD Thermosome subunit 1 OS=Haloferax volcanii (strain ATCC 29605 / DSM
3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 /
DS2) GN=cct1 PE=1 SV=1
Length = 560
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
F ++ REQLA+ FA +L +IP+TLA NA D D + LR+ H+ +
Sbjct: 423 FADSVGGREQLAVEAFAEALDIIPRTLAENAGLDPIDSLVDLRSRHDGGEF--------A 474
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
GLD G V D ++ GV+EP K ++++ ATEAA+ ILRIDD+I
Sbjct: 475 AGLDAYTGEVIDMEEEGVVEPLRVKTQAIESATEAAVMILRIDDVI 520
>sp|Q9YA66|THSB_AERPE Thermosome subunit beta OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsB PE=3
SV=2
Length = 548
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 7/106 (6%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ S L + QLA+ FAR++ +P+ LA NA D +++ KLR+ H + K W
Sbjct: 432 YASKLPGKTQLAVEAFARAVEALPQALAHNAGHDPIEVLVKLRSAHEKPENK-------W 484
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
G+DL G + D GVLEP K+ +LK ATE A ILRIDD+I
Sbjct: 485 YGVDLDTGEIVDMWSRGVLEPMRVKLNALKAATEVASLILRIDDVI 530
>sp|Q52500|THSB_PYRKO Thermosome subunit beta OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsB PE=3 SV=1
Length = 546
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + +EQLAI FA +L VIP+TLA NA D + + K+ A H
Sbjct: 425 YAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGP--------T 476
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI---KLDPEQQGGRS 118
+G+D+ EG D + GV+ P +++K A+EAAI ILRIDD+I KL+ +++GG+
Sbjct: 477 IGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKEGGKG 536
Query: 119 YKNAYDS 125
+ S
Sbjct: 537 GSEDFGS 543
>sp|O24730|THSB_THEK1 Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB
PE=3 SV=2
Length = 546
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + +EQLAI FA +L VIP+TLA NA D + + K+ A H
Sbjct: 425 YAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGP--------T 476
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI---KLDPEQQGGRS 118
+G+D+ EG D + GV+ P +++K A+EAAI ILRIDD+I KL+ +++GG+
Sbjct: 477 IGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKEGGKG 536
Query: 119 YKNAYDS 125
+ S
Sbjct: 537 GSEDFGS 543
>sp|O57762|THS_PYRHO Thermosome subunit OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ths PE=3
SV=1
Length = 549
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 8/106 (7%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + +EQLAI FA +L VIP+TLA NA D + + K+ A H +
Sbjct: 425 YAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKG--------QT 476
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
+G+D+ EG D + GV+EP K +++K A+EAAI ILRIDD+I
Sbjct: 477 IGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVI 522
>sp|O24735|THSB_SULTO Thermosome subunit beta OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsB PE=1 SV=1
Length = 552
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + +EQLAI +A +L + L N D DL+ KLR+ H + K W
Sbjct: 432 YAPQIGGKEQLAIEAYASALENLVMILIENGGYDPIDLLVKLRSAHENEANK-------W 484
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
G+++ G V D K GV+EPA+ K+ ++K ATEAA ILRIDD+I
Sbjct: 485 YGINVFTGQVEDMWKLGVIEPAVVKMNAIKAATEAATLILRIDDLI 530
>sp|Q9V2Q7|THS_PYRAB Thermosome subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ths
PE=3 SV=1
Length = 550
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + +EQLAI FA +L VIP+TLA NA D + + K+ A H
Sbjct: 425 YAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGP--------T 476
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
+G+D+ EG D + GV+EP K +++K A+EAAI ILRIDD+I
Sbjct: 477 IGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVI 522
>sp|O28045|THSA_ARCFU Thermosome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsA PE=3 SV=1
Length = 545
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 59/106 (55%), Gaps = 8/106 (7%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ L REQLA FA +L VIP+ LA N+ D D++ +LR H +T
Sbjct: 425 WAPTLGGREQLAAEAFASALEVIPRALAENSGLDPIDILVELRKAHEEGKT--------T 476
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
G+D+ G V K+ GVLEP K +++ ATE AI ILRIDD+I
Sbjct: 477 YGVDVFSGEVACMKERGVLEPLKVKTQAITSATEVAIMILRIDDVI 522
>sp|O93624|THS_METTL Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths
PE=1 SV=1
Length = 544
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 7/106 (6%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ ++ REQLA+ FA +L V+P+TLA NA D+ +++ KLRA H +
Sbjct: 420 YAEGVSGREQLAVRAFADALEVVPRTLAENAGLDAIEMLVKLRAKHAEGNN-------AY 472
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
GL++ G V + + GV+EP K ++++ ATEA +LRIDD+I
Sbjct: 473 YGLNVFTGDVENMTENGVVEPLRVKTQAIQSATEATEMLLRIDDVI 518
>sp|P48425|THSB_THEAC Thermosome subunit beta OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsB PE=1 SV=1
Length = 543
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + R+QLAI +FA ++ IP+ LA NA D D++ KLRA H K
Sbjct: 423 YAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGN--------KT 474
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
G+++ G + D K GV+EP ++++ ATEAAI ILRIDD+I
Sbjct: 475 YGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVI 520
>sp|P48424|THSA_THEAC Thermosome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsA PE=1 SV=1
Length = 545
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ +++ REQLAI FA++L +IP+TLA NA D + + KL+A H +
Sbjct: 422 YANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKAEHEKGRIS-------- 473
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
VG+DL V D K GV++P K +L+ A E A ILRIDD+I
Sbjct: 474 VGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVI 519
>sp|P61112|THSA_THEK1 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA
PE=1 SV=1
Length = 548
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + +E LAI FA +L +IPKTLA NA D+ +++ K+ + H +
Sbjct: 425 YAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGL--------G 476
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
+G+D+ EG D + G++EP K +++K A+EAAI ILRIDD+I
Sbjct: 477 IGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVI 522
>sp|P61111|THSA_PYRKO Thermosome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsA PE=3 SV=1
Length = 548
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + +E LAI FA +L +IPKTLA NA D+ +++ K+ + H +
Sbjct: 425 YAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGL--------G 476
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
+G+D+ EG D + G++EP K +++K A+EAAI ILRIDD+I
Sbjct: 477 IGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVI 522
>sp|Q53546|THS_DESSY Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3
SV=1
Length = 545
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 66/120 (55%), Gaps = 13/120 (10%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + +EQLAI FA +L VIP+TLA NA D + + K+ A H
Sbjct: 425 YAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPVETLVKVIAAHKEKGP--------T 476
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI---KL--DPEQQGG 116
+G+D+ EG D + GV+ P +++K A+EAAI ILRIDD+I KL D E +GG
Sbjct: 477 IGVDVFEGEPADMMEKGVIAPLRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKEDKGG 536
>sp|O30560|THS2_HALVD Thermosome subunit 2 OS=Haloferax volcanii (strain ATCC 29605 / DSM
3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 /
DS2) GN=cct2 PE=1 SV=1
Length = 557
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ +++ REQLA+ +A +L ++P+ LA NA DS D + LRA H Q +
Sbjct: 426 YADSVSGREQLAVEAYADALELVPRVLAENAGLDSIDTLVDLRAAHEDGQVR-------- 477
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQGG 116
GL++ G V D AGV+E A +K +++ A+EAA +L+IDD+I GG
Sbjct: 478 AGLNVFTGEVEDAFDAGVVETAHAKEQAVASASEAANLVLKIDDIIAAGDLSTGG 532
>sp|P87153|TCPH_SCHPO Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cct7 PE=1 SV=1
Length = 558
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 8/110 (7%)
Query: 5 NLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGL 64
++ ++Q IA FARSL VIP+ L NA DST+++ KLR H + W G+
Sbjct: 431 TISGKQQNFIAAFARSLEVIPRQLCDNAGFDSTNILNKLRMQHAKGEM--------WAGV 482
Query: 65 DLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQ 114
D+ V +N + V EP+ K ++ ATEAA IL +D+ IK +P QQ
Sbjct: 483 DMDSEGVANNFEKFVWEPSTVKSNAILSATEAATLILSVDETIKNEPSQQ 532
>sp|Q5R5C8|TCPH_PONAB T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1
Length = 543
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + ++QL I +A++L +IP+ L NA D+T+++ KLRA H T W
Sbjct: 423 YSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGT--------W 474
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIK 108
G+D+ + DN +A V EPAM +I +L A+EAA I+ +D+ IK
Sbjct: 475 YGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIK 521
>sp|Q99832|TCPH_HUMAN T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2
Length = 543
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + ++QL I +A++L +IP+ L NA D+T+++ KLRA H T W
Sbjct: 423 YSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGT--------W 474
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIK 108
G+D+ + DN +A V EPAM +I +L A+EAA I+ +D+ IK
Sbjct: 475 YGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIK 521
>sp|P28488|THSB_SULSH Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1
Length = 552
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + +EQLAI +A ++ + LA NA D D + +LR+ H + K W
Sbjct: 431 YAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNK-------W 483
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
GL+L G D K GV+EPA+ K+ ++K ATEA +LRIDD++
Sbjct: 484 YGLNLFTGNPEDMWKLGVIEPALVKMNAIKAATEAVTLVLRIDDIV 529
>sp|Q9V2T4|THSB_SULAC Thermosome subunit beta OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsB PE=3 SV=2
Length = 553
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + +EQLAI +A +L + L N D +L+ KLR+ H + K W
Sbjct: 432 YAPQVGGKEQLAIEAYANALESLVMILIENGGFDPIELLVKLRSAHENETNK-------W 484
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQG 115
G+++ G ++D GV+EPA+ K+ ++K ATEA+ ILRIDD+I + +G
Sbjct: 485 HGINVYTGQIQDMWSLGVIEPAVVKMNAIKAATEASTLILRIDDLISAGKKSEG 538
>sp|Q9V2T8|THSB_SULSO Thermosome subunit beta OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsB PE=3 SV=2
Length = 554
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + +EQLAI +A ++ + LA NA D D + +LR+ H + K W
Sbjct: 431 YAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNK-------W 483
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 107
GL+L G D K GV+EPA+ K+ ++K ATEA +LRIDD++
Sbjct: 484 YGLNLFTGNPEDMWKLGVIEPALVKMNAVKAATEAVTLVLRIDDIV 529
>sp|Q9YDK6|THSA_AERPE Thermosome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsA PE=3
SV=2
Length = 554
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
F + ++QLAI +A +L IP LA +A D+ + + KLR+ H+ K+
Sbjct: 427 FARTVGGKQQLAIEAYAEALETIPTVLAESAGMDALEALLKLRSLHSQG--------YKF 478
Query: 62 VGLDLLEG-VVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDP 111
G+++LEG + D K V EP + K + +K A+EAAI+IL+IDD+I P
Sbjct: 479 AGVNVLEGKIEEDMTKINVYEPVLVKKQVIKSASEAAISILKIDDVIAAAP 529
>sp|P80313|TCPH_MOUSE T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1
Length = 544
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 8/107 (7%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + ++QL I +A++L +IP+ L NA D+T+++ KLRA H W
Sbjct: 423 YSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGM--------W 474
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIK 108
G+D+ + DN +A V EPAM +I +L A+EAA I+ +D+ IK
Sbjct: 475 YGVDINNENIADNFQAFVWEPAMVRINALTAASEAACLIVSVDETIK 521
>sp|Q54ER7|TCPH_DICDI T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7
PE=3 SV=1
Length = 555
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 8/113 (7%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ ++ ++QL I FA++L VIP+ +A NA DSTD++ +LR H + KW
Sbjct: 423 YSLSIEGKKQLLINAFAKALEVIPRQIADNAGFDSTDILNQLRQKHAQGE--------KW 474
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQ 114
G+D++ + D ++ + EP++ K+ S+ ATEA IL +D+ ++ + +Q
Sbjct: 475 FGVDIVNEGICDTYESAIWEPSLVKLNSIVAATEATCLILSVDETVQNNQAEQ 527
>sp|Q2NKZ1|TCPH_BOVIN T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=1 SV=1
Length = 543
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 8/107 (7%)
Query: 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKW 61
+ + ++QL I +A++L +IP+ L NA D+T+++ KLRA H W
Sbjct: 423 YSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGM--------W 474
Query: 62 VGLDLLEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIK 108
G+D+ + DN +A V EPAM +I +L A+EAA I+ +D+ IK
Sbjct: 475 YGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIK 521
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,514,800
Number of Sequences: 539616
Number of extensions: 1496506
Number of successful extensions: 3862
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 3590
Number of HSP's gapped (non-prelim): 230
length of query: 130
length of database: 191,569,459
effective HSP length: 96
effective length of query: 34
effective length of database: 139,766,323
effective search space: 4752054982
effective search space used: 4752054982
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)