Query psy14916
Match_columns 130
No_of_seqs 134 out of 1041
Neff 6.6
Searched_HMMs 29240
Date Sat Aug 17 00:14:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14916.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14916hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_A T-complex protein 1 sub 100.0 2.5E-30 8.7E-35 219.8 11.1 110 2-111 420-529 (529)
2 3iyg_B T-complex protein 1 sub 100.0 1.7E-29 5.7E-34 214.1 11.0 103 2-112 411-513 (513)
3 3iyg_Z T-complex protein 1 sub 100.0 1.7E-29 5.9E-34 214.3 11.0 101 2-110 417-517 (517)
4 3iyg_G T-complex protein 1 sub 100.0 2.4E-29 8.2E-34 213.3 10.6 102 2-110 413-514 (515)
5 3iyg_H T-complex protein 1 sub 100.0 4.5E-29 1.5E-33 211.6 10.9 101 2-110 414-514 (515)
6 3p9d_F T-complex protein 1 sub 100.0 1.2E-29 4E-34 216.4 6.7 113 1-116 431-543 (546)
7 3iyg_D T-complex protein 1 sub 100.0 3.5E-29 1.2E-33 212.4 9.5 101 2-110 418-518 (518)
8 3ruv_A Chaperonin, CPN; double 100.0 2.6E-29 8.7E-34 214.3 8.0 107 2-116 418-525 (543)
9 3iyg_Q T-complex protein 1 sub 100.0 8.1E-29 2.8E-33 209.8 10.5 101 2-110 410-512 (512)
10 3p9d_A T-complex protein 1 sub 100.0 4.5E-29 1.5E-33 213.4 9.0 114 2-115 436-553 (559)
11 3ko1_A Chaperonin; 9-fold symm 100.0 1.7E-29 5.8E-34 215.9 6.4 108 2-116 432-539 (553)
12 3iyg_E T-complex protein 1 sub 100.0 1.2E-28 3.9E-33 209.0 10.9 101 2-109 414-514 (515)
13 3aq1_B Thermosome subunit; gro 100.0 6.3E-29 2.2E-33 210.0 8.2 107 2-116 376-482 (500)
14 3p9d_B T-complex protein 1 sub 100.0 1.3E-29 4.6E-34 215.2 3.8 107 2-116 418-524 (527)
15 3p9d_G T-complex protein 1 sub 100.0 3.3E-29 1.1E-33 213.9 5.9 108 2-117 427-534 (550)
16 3p9d_E T-complex protein 1 sub 100.0 8E-29 2.7E-33 212.0 7.4 104 2-112 457-560 (562)
17 3p9d_D T-complex protein 1 sub 99.9 6.6E-29 2.3E-33 211.1 5.6 101 2-110 428-528 (528)
18 1a6d_B Thermosome (beta subuni 99.9 1.4E-28 4.6E-33 209.7 7.1 107 2-116 423-529 (543)
19 3p9d_C T-complex protein 1 sub 99.9 2E-28 6.9E-33 210.7 5.1 103 2-112 486-588 (590)
20 1q3q_A Thermosome alpha subuni 99.9 3.1E-28 1.1E-32 207.8 6.0 105 2-114 425-529 (548)
21 1a6d_A Thermosome (alpha subun 99.9 6.2E-28 2.1E-32 205.8 6.5 104 2-113 422-525 (545)
22 3p9d_H T-complex protein 1 sub 99.9 1.5E-29 5E-34 216.8 -5.4 115 2-116 437-554 (568)
23 1we3_A CPN60(groel); chaperoni 99.9 3.4E-27 1.2E-31 201.3 7.6 103 2-114 427-529 (543)
24 3rtk_A 60 kDa chaperonin 2; he 99.9 6.3E-27 2.1E-31 199.9 8.5 99 6-116 429-527 (546)
25 1iok_A Chaperonin 60; chaperon 99.9 1.2E-26 4.1E-31 198.1 7.0 101 2-114 429-529 (545)
26 1kp8_A Groel protein; chaperon 99.9 5.5E-26 1.9E-30 194.1 8.6 100 2-114 428-527 (547)
27 1hus_A Ribosomal protein S7; R 44.5 34 0.0012 24.2 4.6 35 6-44 31-65 (155)
28 1rss_A Ribosomal protein S7; R 43.6 42 0.0014 23.6 4.9 35 6-44 27-61 (151)
29 1iqv_A Ribosomal protein S7; R 37.7 53 0.0018 24.7 4.9 35 6-44 96-130 (218)
30 2xzm_G Ribosomal protein S7 co 36.9 43 0.0015 24.8 4.2 34 7-44 78-111 (200)
31 3i1m_G 30S ribosomal protein S 34.5 42 0.0014 24.4 3.8 34 7-44 33-66 (179)
32 3u5c_F RP14, S2, YS8, 40S ribo 33.3 50 0.0017 24.9 4.2 33 7-43 104-136 (225)
33 3r8n_G 30S ribosomal protein S 33.1 33 0.0011 24.2 3.0 34 7-44 32-65 (151)
34 3gty_S TF, 30S ribosomal prote 31.6 39 0.0013 23.7 3.2 34 7-44 26-59 (149)
35 3bei_A Prothrombin; serine pro 28.1 19 0.00064 20.4 0.8 9 122-130 9-17 (44)
36 3b9f_L Prothrombin; michaelis 22.7 27 0.00093 20.2 0.8 9 122-130 14-22 (49)
37 1etr_L Epsilon-thrombin; serin 22.5 27 0.00093 20.2 0.7 9 122-130 14-22 (49)
38 2i15_A A05_ORF129, hypothetica 21.4 1.9E+02 0.0065 19.3 4.9 41 6-46 88-128 (135)
No 1
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.96 E-value=2.5e-30 Score=219.82 Aligned_cols=110 Identities=73% Similarity=1.080 Sum_probs=97.8
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+++++|++|+++++||+|||+||++||+|||+|+.+++.+|++.|.++..+..+.++.++|||+.+|++.||++.||||
T Consensus 420 ~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~d 499 (529)
T 3iyg_A 420 YATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFE 499 (529)
T ss_pred HhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEe
Confidence 57788999999999999999999999999999999999999999997653111112235799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcCC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLDP 111 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~~ 111 (130)
|+.||+|+|++|+|+|+||||||+||+..|
T Consensus 500 p~~vk~~al~~A~e~a~~iL~iD~ii~~~~ 529 (529)
T 3iyg_A 500 PTIVKVKSLKFATEAAITILRIDDLIKLHP 529 (529)
T ss_pred cHHHHHHHHHHHHHHHHHHHhHHhhhcCCC
Confidence 999999999999999999999999998743
No 2
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=99.96 E-value=1.7e-29 Score=214.14 Aligned_cols=103 Identities=39% Similarity=0.540 Sum_probs=97.4
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+++++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.++ +.++|||+.+|++.||++.||||
T Consensus 411 ~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~--------~~~~G~d~~~g~~~d~~~~gI~d 482 (513)
T 3iyg_B 411 LASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEG--------KTTAGLDMKEGTIGDMSVLGITE 482 (513)
T ss_pred HhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcC--------CCceeecCCCCCccchHhccCEe
Confidence 5678899999999999999999999999999999999999999999765 25799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcCCC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLDPE 112 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~~~ 112 (130)
|+.||+++|++|+|+|+||||||++|+.+|+
T Consensus 483 p~~vk~~al~~A~~~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 483 SFQVKRQVLLSAAEAAEVILRVDNIIKAAPR 513 (513)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999998764
No 3
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.96 E-value=1.7e-29 Score=214.29 Aligned_cols=101 Identities=32% Similarity=0.456 Sum_probs=95.3
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+.+++|++|+++++|++|||+||++||+|||+|+.+++.+|++.|.++ +.++|||+.+|++.||++.||||
T Consensus 417 ~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~--------~~~~G~d~~~g~~~d~~~~gI~d 488 (517)
T 3iyg_Z 417 YKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSES--------GQLVGVDLNTGEPMVAAEAGIWD 488 (517)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--------CCcEEEeCCCCcccchhhccCee
Confidence 5678899999999999999999999999999999999999999999754 36899999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLD 110 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~ 110 (130)
|+.||+|+|++|+|+|+||||||+||.++
T Consensus 489 p~~vk~~al~~A~e~a~~iL~iD~ii~~~ 517 (517)
T 3iyg_Z 489 NYCVKKQLLHSCTVIATNILLVDEIMRAG 517 (517)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999999753
No 4
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.96 E-value=2.4e-29 Score=213.26 Aligned_cols=102 Identities=31% Similarity=0.439 Sum_probs=95.2
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+++++|++|+++++|++|||+||++||+|||+|+.+++.+|++.|.++. +.++|||+.+|++.||++.||||
T Consensus 413 ~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~-------~~~~G~d~~~g~~~d~~~~gi~d 485 (515)
T 3iyg_G 413 KSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQEN-------CETWGVNGETGTLVDMKELGIWE 485 (515)
T ss_pred HhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcC-------CCceeeeCCCCcccccHHcCCEE
Confidence 67789999999999999999999999999999999999999999997532 25789999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLD 110 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~ 110 (130)
|+.||+|+|++|+|+|+||||||+||...
T Consensus 486 p~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 486 PLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 99999999999999999999999999753
No 5
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.96 E-value=4.5e-29 Score=211.65 Aligned_cols=101 Identities=38% Similarity=0.572 Sum_probs=95.3
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+++++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.++ +.++|||+.+|++.||++.||||
T Consensus 414 ~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~--------~~~~G~d~~~g~~~dm~~~gI~d 485 (515)
T 3iyg_H 414 YSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG--------GMWYGVDINTEDIADNFEAFVWE 485 (515)
T ss_pred HHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcc--------CCCeeEeCCCCcccccHhccCEE
Confidence 5678899999999999999999999999999999999999999999764 25789999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLD 110 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~ 110 (130)
|+.||+++|++|+|+|+||||||+||++.
T Consensus 486 p~~vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 486 PAMVRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999853
No 6
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=99.96 E-value=1.2e-29 Score=216.41 Aligned_cols=113 Identities=27% Similarity=0.341 Sum_probs=100.7
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCcc
Q psy14916 1 MFGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVL 80 (130)
Q Consensus 1 ~~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~ 80 (130)
+|+++++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.+.. +..++.++|||+.+|++.||++.|||
T Consensus 431 ~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~---~~~~~~~~G~d~~~g~~~d~~~~gI~ 507 (546)
T 3p9d_F 431 MNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQ---DSDETRYVGVDLNIGDSCDPTIEGIW 507 (546)
T ss_dssp TTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHT---TSTTSSCCCCBTTTTBCCCSGGGTCE
T ss_pred hhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhh---cccCCceeeEeCCCCeecchHhccCE
Confidence 478899999999999999999999999999999999999999999986310 00012579999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhHHHHhhcCCCCCCC
Q psy14916 81 EPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQGG 116 (130)
Q Consensus 81 dp~~vK~~~i~~A~e~a~~iLrID~iI~~~~~~~~~ 116 (130)
||+.||+++|++|+|+|++|||||+||++++.+..+
T Consensus 508 dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~~~~~ 543 (546)
T 3p9d_F 508 DSYRVLRNAITGATGIASNLLLCDELLRAGRSTLKE 543 (546)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHTEEEEEEECCSSCCC
T ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence 999999999999999999999999999988776554
No 7
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.96 E-value=3.5e-29 Score=212.40 Aligned_cols=101 Identities=31% Similarity=0.480 Sum_probs=95.3
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+++++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.++ +.++|||+.+|++.||++.||||
T Consensus 418 ~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~--------~~~~G~d~~~g~~~d~~~~gI~d 489 (518)
T 3iyg_D 418 YSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQG--------EKTTGINVRKGGISNILEELVVQ 489 (518)
T ss_pred HhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcc--------CCceeEeCCCCcccchhhccCEE
Confidence 5678899999999999999999999999999999999999999999765 25799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLD 110 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~ 110 (130)
|+.||+++|++|+|+|+||||||+||+++
T Consensus 490 p~~vk~~al~~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 490 PLLVSVSALTLATETVRSILKIDDVVNTR 518 (518)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhcceEecC
Confidence 99999999999999999999999999763
No 8
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=99.96 E-value=2.6e-29 Score=214.29 Aligned_cols=107 Identities=37% Similarity=0.581 Sum_probs=95.5
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhh-ccccccccCCCcceeEEcCCCceeccccCCcc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHN-SSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVL 80 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~-~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~ 80 (130)
|+++++|++|+++++|++||++||++||+|||+|+.+++.+|++.|. ++ +.++|||+.+|++.||++.|||
T Consensus 418 ~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~--------~~~~G~d~~~g~~~dm~~~gI~ 489 (543)
T 3ruv_A 418 YAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNG--------NKCAGLNVFTGAVEDMCENGVV 489 (543)
T ss_dssp HHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTC--------CTTEEECTTTCSEEETTTTTCE
T ss_pred HhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcC--------CceeeeeCCCCccccHHHcCCE
Confidence 45678999999999999999999999999999999999999999986 43 3689999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhHHHHhhcCCCCCCC
Q psy14916 81 EPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQGG 116 (130)
Q Consensus 81 dp~~vK~~~i~~A~e~a~~iLrID~iI~~~~~~~~~ 116 (130)
||+.||+++|++|+|+|++|||||++|..+|++.|+
T Consensus 490 dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~ 525 (543)
T 3ruv_A 490 EPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLRGAP 525 (543)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHTCCEEEEEC------
T ss_pred ecHHHHHHHHHHHHHHHHHHHhHHhheecCccCCCC
Confidence 999999999999999999999999999998887654
No 9
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.95 E-value=8.1e-29 Score=209.78 Aligned_cols=101 Identities=38% Similarity=0.567 Sum_probs=94.5
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCC--ceeccccCCc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEG--VVRDNKKAGV 79 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g--~i~d~~~~gI 79 (130)
|+++++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.++ ++++|||+.+| ++.||++.||
T Consensus 410 ~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~--------~~~~G~d~~~~~g~~~d~~~~gI 481 (512)
T 3iyg_Q 410 YGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEG--------NKNVGLDIEAEVPAVKDMLEAGV 481 (512)
T ss_pred HhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcC--------CCcEEEecCCCCCcccchHhccC
Confidence 5678899999999999999999999999999999999999999999764 36899999965 9999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHhHHHHhhcC
Q psy14916 80 LEPAMSKIKSLKFATEAAITILRIDDMIKLD 110 (130)
Q Consensus 80 ~dp~~vK~~~i~~A~e~a~~iLrID~iI~~~ 110 (130)
|||+.||+++|++|+|+|+||||||+||+++
T Consensus 482 ~dp~~vk~~al~~A~~~a~~iL~id~ii~~k 512 (512)
T 3iyg_Q 482 LDTYLGKYWAIKLATNAAVTVLRVDQIIMAK 512 (512)
T ss_pred eEcHHHHHHHHHHHHHHHHHHHhHhHheecC
Confidence 9999999999999999999999999999753
No 10
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=99.95 E-value=4.5e-29 Score=213.44 Aligned_cols=114 Identities=59% Similarity=0.847 Sum_probs=99.2
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcccc----ccccCCCcceeEEcCCCceeccccC
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQT----KKDKVDLKWVGLDLLEGVVRDNKKA 77 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~----~~~~~~~~~~Gid~~~g~i~d~~~~ 77 (130)
|+.+++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.++.. +..+.+..++|||+.+|++.||++.
T Consensus 436 ~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~ 515 (559)
T 3p9d_A 436 FATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHA 515 (559)
T ss_dssp HHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTS
T ss_pred HhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhc
Confidence 456789999999999999999999999999999999999999999975421 0000111278999999999999999
Q ss_pred CccccHHHHHHHHHHHHHHHHHHHhHHHHhhcCCCCCC
Q psy14916 78 GVLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQG 115 (130)
Q Consensus 78 gI~dp~~vK~~~i~~A~e~a~~iLrID~iI~~~~~~~~ 115 (130)
|||||+.||+++|++|+|+|+||||||++|+..|++++
T Consensus 516 gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~ 553 (559)
T 3p9d_A 516 GVLEPTISKVKSLKSALEACVAILRIDTMITVDPEPPK 553 (559)
T ss_dssp SCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCCCC
T ss_pred cCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCcccc
Confidence 99999999999999999999999999999998877653
No 11
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=99.95 E-value=1.7e-29 Score=215.88 Aligned_cols=108 Identities=38% Similarity=0.603 Sum_probs=94.4
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+++++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.++. ++++|||+.+|++.||++.||||
T Consensus 432 ~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-------~~~~G~d~~~g~~~d~~~~gI~d 504 (553)
T 3ko1_A 432 YAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENEN-------NKWYGIDLYAGQPVDMWQKGVIE 504 (553)
T ss_dssp HHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGG-------GTTEEEETTTTEEEESGGGSCEE
T ss_pred hccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcC-------CceEeEEeecCCchHHHHhCccc
Confidence 34567899999999999999999999999999999999999999986542 15799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcCCCCCCC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLDPEQQGG 116 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~~~~~~~ 116 (130)
|+.||+++|++|+|+|+||||||++|+.+|+++|+
T Consensus 505 p~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~ 539 (553)
T 3ko1_A 505 PALVKMNAIKAATEAATLVLRIDDVVSAGKKSGGE 539 (553)
T ss_dssp ETTHHHHHHHHHHHHHHHHHHEEEECCC-------
T ss_pred hhhhhhhhhhhcchhheEEEehHHHHHhhhhccCC
Confidence 99999999999999999999999999998887655
No 12
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.95 E-value=1.2e-28 Score=208.98 Aligned_cols=101 Identities=30% Similarity=0.362 Sum_probs=94.8
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+.+++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.++. +.++|||+.+|++.||++.||||
T Consensus 414 ~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-------~~~~G~d~~~g~~~d~~~~gI~d 486 (515)
T 3iyg_E 414 EADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEV-------NPALGIDCLHKGTNDMKHQHVIE 486 (515)
T ss_pred HhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccC-------CCeeeEecCCCcccchHhccCEE
Confidence 56788999999999999999999999999999999999999999997531 36799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKL 109 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~ 109 (130)
|+.||+++|++|+|+|+||||||+||++
T Consensus 487 p~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 487 TLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred cHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 9999999999999999999999999975
No 13
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=99.95 E-value=6.3e-29 Score=210.04 Aligned_cols=107 Identities=39% Similarity=0.571 Sum_probs=88.7
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+.+++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.++ +.++|||+.+|++.||++.||||
T Consensus 376 ~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~--------~~~~G~d~~~g~~~d~~~~gI~d 447 (500)
T 3aq1_B 376 YASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKG--------NKNAGLNVYTGEVVDMWENDVIE 447 (500)
T ss_dssp HHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTT--------CTTEEECTTTCCEEETTTTTCEE
T ss_pred HhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCC--------CCCeeEeCCCCCccchHhcCCCC
Confidence 4556899999999999999999999999999999999999999998654 25799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcCCCCCCC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLDPEQQGG 116 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~~~~~~~ 116 (130)
|+.||+++|++|+|+|++|||||++|...|+++|+
T Consensus 448 p~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~ 482 (500)
T 3aq1_B 448 PLRIKTQAINAAMEATVMILRIDDVVASKGSANQG 482 (500)
T ss_dssp EHHHHHHHHHHHHHHHHHHHCC-------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCC
Confidence 99999999999999999999999999988765543
No 14
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=99.95 E-value=1.3e-29 Score=215.20 Aligned_cols=107 Identities=35% Similarity=0.516 Sum_probs=95.2
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+.+++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.++ ++++|||+.+|++.||++.||||
T Consensus 418 ~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~--------~~~~G~d~~~g~~~dm~~~gI~d 489 (527)
T 3p9d_B 418 EAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNG--------ISTSGLDLNNGTIADMRQLGIVE 489 (527)
T ss_dssp HHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHT--------CSCCCCCSSSTTCCCHHHHTCEE
T ss_pred HHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcC--------CCceeEECCCCCCcchHhccCEE
Confidence 3456789999999999999999999999999999999999999999764 26799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcCCCCCCC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLDPEQQGG 116 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~~~~~~~ 116 (130)
|+.||+++|++|+|+|+||||||++|..+|+++.+
T Consensus 490 p~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~ 524 (527)
T 3p9d_B 490 SYKLKRAVVSSASEAAEVLLRVDNIIRARPRTANR 524 (527)
T ss_dssp ETTHHHHHHHHHHHHHHHHHHCCEEEEEC------
T ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcccCC
Confidence 99999999999999999999999999998876544
No 15
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=99.95 E-value=3.3e-29 Score=213.95 Aligned_cols=108 Identities=33% Similarity=0.500 Sum_probs=98.0
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+++++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.++ ++++|||+.+|++.||++.||||
T Consensus 427 ~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~--------~~~~G~d~~~g~~~dm~~~gI~d 498 (550)
T 3p9d_G 427 YSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKG--------EKWYGVVFETENIGDNFAKFVWE 498 (550)
T ss_dssp HHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHS--------CSCCCBCSSSSSBCCHHHHTCEE
T ss_pred HhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcC--------CCceeeeCCCCcccchHhccCEe
Confidence 4567899999999999999999999999999999999999999999764 25799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcCCCCCCCC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLDPEQQGGR 117 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~~~~~~~~ 117 (130)
|+.||+++|++|+|+|+||||||++|+.+|++..+.
T Consensus 499 p~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~~ 534 (550)
T 3p9d_G 499 PALVKINALNSATEATNLILSVDETITNKGSESANA 534 (550)
T ss_dssp EHHHHHHHHHHHHHHHHHHHTEEEEECCCCCC----
T ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhCCCcccccC
Confidence 999999999999999999999999999988766544
No 16
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=99.95 E-value=8e-29 Score=212.00 Aligned_cols=104 Identities=27% Similarity=0.342 Sum_probs=96.0
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+++++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.++. +.++|||+.+|++.||++.||||
T Consensus 457 ~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~-------~~~~G~d~~~g~~~dm~~~gI~d 529 (562)
T 3p9d_E 457 EADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEK-------ISNIGVDCLGYGSNDMKELFVVD 529 (562)
T ss_dssp HHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTT-------TSSBCCBTTTTBCCBTTTTTCEE
T ss_pred HhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcC-------CCceeEecCCCcccchHhccCEE
Confidence 45678999999999999999999999999999999999999999997532 36799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcCCC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLDPE 112 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~~~ 112 (130)
|+.||+++|++|+|+|++|||||++|+++++
T Consensus 530 p~~vk~~al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 530 PFIGKKQQILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp EHHHHHHHHHHHHHHHHHHHTEEEEEECCC-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999999999999997654
No 17
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=99.95 E-value=6.6e-29 Score=211.15 Aligned_cols=101 Identities=28% Similarity=0.394 Sum_probs=95.3
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+++++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.++ +.++|||+.+|++.||++.||||
T Consensus 428 ~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~--------~~~~G~d~~~g~~~dm~~~gI~d 499 (528)
T 3p9d_D 428 EARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENG--------ELNDGISVRRSGTTNTYEEHILQ 499 (528)
T ss_dssp CCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSS--------SCCCCCCSSSSSCCCHHHHCCEE
T ss_pred HhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcc--------CCccceecCCCCccchHhccCee
Confidence 6778999999999999999999999999999999999999999998664 36799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLD 110 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~ 110 (130)
|+.||+++|++|+|+|+||||||+||+++
T Consensus 500 p~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 500 PVLVSTSAITLASECVKSILRIDDIAFSR 528 (528)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHCSCCCBCC
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhHheecC
Confidence 99999999999999999999999999763
No 18
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=99.95 E-value=1.4e-28 Score=209.74 Aligned_cols=107 Identities=39% Similarity=0.583 Sum_probs=93.3
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+.+++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.++ ..++|||+.+|++.||++.||||
T Consensus 423 ~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~--------~~~~G~d~~~g~~~d~~~~gI~d 494 (543)
T 1a6d_B 423 YAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKG--------NKTYGINVFTGEIEDMVKNGVIE 494 (543)
T ss_dssp HHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTT--------CTTEEEETTTTEEEETTTTTCEE
T ss_pred HhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCC--------CCCeeEeCCCCcccchhhcCcee
Confidence 3456789999999999999999999999999999999999999999654 25799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcCCCCCCC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLDPEQQGG 116 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~~~~~~~ 116 (130)
|+.||+++|++|+|+|++|||||++|...|.+.|+
T Consensus 495 p~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~ 529 (543)
T 1a6d_B 495 PIRVGKQAIESATEAAIMILRIDDVIATKSSSSSS 529 (543)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHEEEEEC--------
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCC
Confidence 99999999999999999999999999988765543
No 19
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=99.94 E-value=2e-28 Score=210.68 Aligned_cols=103 Identities=31% Similarity=0.384 Sum_probs=95.6
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+++++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.++ ++++|||+.+|++.||++.||||
T Consensus 486 ~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~--------~~~~G~d~~~g~~~dm~~~gI~d 557 (590)
T 3p9d_C 486 KAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQG--------NFTTGIDGDKGKIVDMVSYGIWE 557 (590)
T ss_dssp HHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTS--------CTTCBCCTTSSSCBCTTTTTCCE
T ss_pred HhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--------CCCEeEeCCCCeEeehHHcCCeE
Confidence 3456889999999999999999999999999999999999999999764 36899999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcCCC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLDPE 112 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~~~ 112 (130)
|+.||+++|++|+|+|+||||||++|...|.
T Consensus 558 p~~vk~~al~~A~e~a~~iL~id~ii~~~~~ 588 (590)
T 3p9d_C 558 PEVIKQQSVKTAIESACLLLRVDDIVSGVRK 588 (590)
T ss_dssp EHHHHHHHHHHHHHHHHHTTSEEEEECCCC-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999987653
No 20
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=99.94 E-value=3.1e-28 Score=207.75 Aligned_cols=105 Identities=38% Similarity=0.581 Sum_probs=95.5
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+.+++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.++ ..++|||+.+|++.||++.||||
T Consensus 425 ~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~--------~~~~G~d~~~g~~~d~~~~gI~d 496 (548)
T 1q3q_A 425 YAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNR--------GLGIGIDVFEGKPADMLEKGIIE 496 (548)
T ss_dssp HHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHH--------CTTEEEETTTTEEEETTTTTCEE
T ss_pred HhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcC--------CCCcceeCCCCCccchhhcCCEe
Confidence 3445789999999999999999999999999999999999999998654 25799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcCCCCC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLDPEQQ 114 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~~~~~ 114 (130)
|+.||+++|++|+|+|++|||||++|...|++.
T Consensus 497 p~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~ 529 (548)
T 1q3q_A 497 PLRVKKQAIKSASEAAIMILRIDDVIAAKATKP 529 (548)
T ss_dssp EHHHHHHHHHHHHHHHHHHHTCCEEEECCC---
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCC
Confidence 999999999999999999999999999887653
No 21
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=99.94 E-value=6.2e-28 Score=205.82 Aligned_cols=104 Identities=40% Similarity=0.540 Sum_probs=92.7
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+++++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.++ ..++|||+.+|++.||++.||||
T Consensus 422 ~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~--------~~~~G~d~~~g~~~d~~~~gI~d 493 (545)
T 1a6d_A 422 YANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKG--------RISVGVDLDNNGVGDMKAKGVVD 493 (545)
T ss_dssp HHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTT--------CTTEEEETTTTEEEEHHHHTCEE
T ss_pred HhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcC--------CCCcceecccCccccchhcCccc
Confidence 4556899999999999999999999999999999999999999999654 25799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcCCCC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLDPEQ 113 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~~~~ 113 (130)
|+.||+++|++|+|+|++|||||++|...|++
T Consensus 494 p~~vk~~al~~A~e~a~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 494 PLRVKTHALESAVEVATMILRIDDVIASKKST 525 (545)
T ss_dssp EHHHHHHHHHHHHHHHHHHHTCCEEC------
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 99999999999999999999999999987765
No 22
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=99.94 E-value=1.5e-29 Score=216.82 Aligned_cols=115 Identities=30% Similarity=0.405 Sum_probs=86.3
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCc---eeccccCC
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGV---VRDNKKAG 78 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~---i~d~~~~g 78 (130)
|+++++|++|+++++|++||++||++||+|||+|+.+++.+|++.|.+......+.+++++|||+.+|+ +.||++.|
T Consensus 437 ~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~g 516 (568)
T 3p9d_H 437 YGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREEN 516 (568)
T ss_dssp HHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHH
T ss_pred HhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHcc
Confidence 456789999999999999999999999999999999999999999864100001112468999999997 99999999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHhHHHHhhcCCCCCCC
Q psy14916 79 VLEPAMSKIKSLKFATEAAITILRIDDMIKLDPEQQGG 116 (130)
Q Consensus 79 I~dp~~vK~~~i~~A~e~a~~iLrID~iI~~~~~~~~~ 116 (130)
||||+.||+++|++|+|+|+||||||+||+.+|.++|+
T Consensus 517 I~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~ 554 (568)
T 3p9d_H 517 IYDMLATKKFAINVATEAATTVLSIDQIIMAKKAGGPR 554 (568)
T ss_dssp HHHHHHHHHHHHHCCEECBCCC----------------
T ss_pred CEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccCCCC
Confidence 99999999999999999999999999999998887665
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=99.94 E-value=3.4e-27 Score=201.34 Aligned_cols=103 Identities=21% Similarity=0.274 Sum_probs=95.4
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+.+++|++|+++++|++||++||++||+|||+|+.+++.+|++.|. +.++|||+.+|++.||++.||||
T Consensus 427 ~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~----------~~~~G~d~~~g~~~dm~~~gI~d 496 (543)
T 1we3_A 427 LIKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETK----------NPRYGFNAATGEFVDMVEAGIVD 496 (543)
T ss_dssp HHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCS----------CTTEEEETTTTEEEETTTTTCEE
T ss_pred HhhccCchHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcC----------CCCEEEeCCCCeecccccCCcCc
Confidence 34567899999999999999999999999999999999999998873 25799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcCCCCC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLDPEQQ 114 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~~~~~ 114 (130)
|+.||+++|++|+++|++|||||++|...|++.
T Consensus 497 p~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~ 529 (543)
T 1we3_A 497 PAKVTRSALQNAASIGALILTTEAVVAEKPEKK 529 (543)
T ss_dssp EHHHHHHHHHHHHHHHHHHHTEEEEEEECSCC-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccC
Confidence 999999999999999999999999999888654
No 24
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=99.93 E-value=6.3e-27 Score=199.93 Aligned_cols=99 Identities=23% Similarity=0.249 Sum_probs=83.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccccHHH
Q psy14916 6 LNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLEPAMS 85 (130)
Q Consensus 6 ~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~dp~~v 85 (130)
++|++|+++++|++||++||++||+|||+|+.+++.+|++.+ ..+|||+.+|++.||++.|||||+.|
T Consensus 429 ~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~------------~~~G~d~~~g~~~Dm~~~gI~dp~~v 496 (546)
T 3rtk_A 429 LEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLP------------AGHGLNAQTGVYEDLLAAGVADPVKV 496 (546)
T ss_dssp CCTTHHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHSC------------TTEECCSSSCCCEETTTTTCEEEHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc------------CCEeEcCCCCcEeeHHHcCCEecHHH
Confidence 789999999999999999999999999999999999998742 24899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHhhcCCCCCCC
Q psy14916 86 KIKSLKFATEAAITILRIDDMIKLDPEQQGG 116 (130)
Q Consensus 86 K~~~i~~A~e~a~~iLrID~iI~~~~~~~~~ 116 (130)
|+++|++|+|+|++|||||++|+.+|++.|+
T Consensus 497 k~~al~~A~e~A~~iL~id~iI~~~~~~~~~ 527 (546)
T 3rtk_A 497 TRSALQNAASIAGLFLTTEAVVADKPEKEKA 527 (546)
T ss_dssp HHHHHHHHHHHHHHHHHCC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9999999999999999999999998876543
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=99.93 E-value=1.2e-26 Score=198.07 Aligned_cols=101 Identities=27% Similarity=0.295 Sum_probs=92.5
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+. ++|++|+++++|++||++||++||+|||+|+.+++.+|++.| + +++|||+.+|++.||++.||||
T Consensus 429 ~~~-~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~-~----------~~~G~d~~~g~~~dm~~~gI~d 496 (545)
T 1iok_A 429 LSG-ANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESS-D----------KAFGFNAQTEEYGDMFKFGVID 496 (545)
T ss_dssp CCC-SSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCC-S----------TTEEEETTTTEEEEHHHHTCEE
T ss_pred Hhc-cCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc-C----------CCeeEeCCCCcccchHhcCcEE
Confidence 444 789999999999999999999999999999999999999765 1 5799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcCCCCC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLDPEQQ 114 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~~~~~ 114 (130)
|+.||+++|++|+++|++|||||++|...|.+.
T Consensus 497 p~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~ 529 (545)
T 1iok_A 497 PAKVVRTALEDAASVAGLLITTEAMIAEKPEPK 529 (545)
T ss_dssp EHHHHHHHHHHHHHHHHHHHTEEEEEEECC---
T ss_pred ccHHHHHHHHHHHHHHHHHHhHHHhhccCCccC
Confidence 999999999999999999999999999887644
No 26
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=99.92 E-value=5.5e-26 Score=194.10 Aligned_cols=100 Identities=13% Similarity=0.222 Sum_probs=92.0
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccccccccCCCcceeEEcCCCceeccccCCccc
Q psy14916 2 FGSNLNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAYHNSSQTKKDKVDLKWVGLDLLEGVVRDNKKAGVLE 81 (130)
Q Consensus 2 ~a~~~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~h~~~~~~~~~~~~~~~Gid~~~g~i~d~~~~gI~d 81 (130)
|+. ++|++|+++++|++||++||++||+|||+|+.+++.+|++. + .++|||+.+|++.||++.||||
T Consensus 428 ~~~-~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~--~----------~~~G~d~~~g~~~dm~~~gI~D 494 (547)
T 1kp8_A 428 LRG-QNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG--D----------GNYGYNAATEEYGNMIDMGILD 494 (547)
T ss_dssp CCC-SSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS--C----------TTEEEETTTTEEEETTTTTCEE
T ss_pred Hhc-cCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc--C----------CCEeEeCCCCccccchhcCcee
Confidence 444 78999999999999999999999999999999999999864 1 4799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcCCCCC
Q psy14916 82 PAMSKIKSLKFATEAAITILRIDDMIKLDPEQQ 114 (130)
Q Consensus 82 p~~vK~~~i~~A~e~a~~iLrID~iI~~~~~~~ 114 (130)
|+.||+++|++|+++|++|||||++|...|++.
T Consensus 495 p~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~ 527 (547)
T 1kp8_A 495 PTKVTRSALQYAASVAGLMITTECMVTDLPKND 527 (547)
T ss_dssp EHHHHHHHHHHHHHHHHHHHTEEEEEEECCC--
T ss_pred chHhHHHHHHHHHHHHHHHHhHhheeecCCccC
Confidence 999999999999999999999999999888654
No 27
>1hus_A Ribosomal protein S7; RNA-binding protein, decoding center,; 2.50A {Geobacillus stearothermophilus} SCOP: a.75.1.1
Probab=44.47 E-value=34 Score=24.21 Aligned_cols=35 Identities=9% Similarity=0.197 Sum_probs=29.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q psy14916 6 LNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLR 44 (130)
Q Consensus 6 ~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~ 44 (130)
..|+..++.++|.+||+.|-.. .|.||++++.+-.
T Consensus 31 ~~GKKs~A~~Iv~~a~~~I~~k----t~~nPl~vl~~Ai 65 (155)
T 1hus_A 31 IDGKKSKAQKILYTAFDIIRER----TGKDPMEVFEQAL 65 (155)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHH----HCSCHHHHHHHHH
T ss_pred hCccHHHHHHHHHHHHHHHHHH----cCCCcHHHHHHHH
Confidence 3699999999999999988543 5889999987643
No 28
>1rss_A Ribosomal protein S7; RNA-binding, translation; 1.90A {Thermus thermophilus} SCOP: a.75.1.1 PDB: 1n32_G* 1i95_G* 1i96_G* 1i97_G* 1i94_G 1j5e_G* 1n33_G* 1n34_G 1n36_G 1pns_G 1pnx_G 1voq_G 1vos_G 1vov_G 1vox_G 1voz_G 2e5l_G 2zm6_G 3fic_G* 3mr8_G ...
Probab=43.64 E-value=42 Score=23.64 Aligned_cols=35 Identities=14% Similarity=0.225 Sum_probs=29.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q psy14916 6 LNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLR 44 (130)
Q Consensus 6 ~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~ 44 (130)
..|+..++.++|.+||+.|-.. .|.||++++.+-.
T Consensus 27 ~~GKKs~A~~Iv~~a~~~i~~k----t~~nPl~vl~~Ai 61 (151)
T 1rss_A 27 RDGKKNLAARIFYDACKIIQEK----TGQEPLKVFKQAV 61 (151)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHH----HCSCHHHHHHHHH
T ss_pred hcccHHHHHHHHHHHHHHHHHH----cCCCcHHHHHHHH
Confidence 3699999999999999998543 5889999987643
No 29
>1iqv_A Ribosomal protein S7; RNA-binding, decoding center, helix-turn- helix, ribosome; 2.10A {Pyrococcus horikoshii} SCOP: a.75.1.1
Probab=37.67 E-value=53 Score=24.70 Aligned_cols=35 Identities=17% Similarity=0.219 Sum_probs=28.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q psy14916 6 LNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLR 44 (130)
Q Consensus 6 ~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~ 44 (130)
..|+...+.+++.+||+.|-+. .|.||++++.+-.
T Consensus 96 n~GKK~~A~~Iv~~Af~iI~~~----t~~nPl~Vl~~Ai 130 (218)
T 1iqv_A 96 LNSKKVRAYEVVKEAFKIIEKR----TGKNPIQVLVWAI 130 (218)
T ss_dssp --CHHHHHHHHHHHHHHHHHHH----HSSCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHH----cCCCcHHHHHHHH
Confidence 3799999999999999998554 4889999987643
No 30
>2xzm_G Ribosomal protein S7 containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_G 3j0o_T 3j0l_T
Probab=36.88 E-value=43 Score=24.80 Aligned_cols=34 Identities=9% Similarity=0.183 Sum_probs=28.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q psy14916 7 NSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLR 44 (130)
Q Consensus 7 ~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~ 44 (130)
.|+..++.+++.+||+.|-.. .|.||++++.+-.
T Consensus 78 ~GKKs~A~~Iv~~A~~~I~~k----t~~nPl~vl~~Ai 111 (200)
T 2xzm_G 78 AGKKALCIKVVKNAFEIIHLV----TGRNPLEVFVGAV 111 (200)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH----HCSCTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHH----cCCCcHHHHHHHH
Confidence 499999999999999998553 4889999987643
No 31
>3i1m_G 30S ribosomal protein S7; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_G* 3e1a_U 3e1c_U 1vs5_G 3i1o_G 3i1q_G 3i1s_G 3i1z_G 3i21_G 3izv_K* 3izw_K* 3kc4_G 3or9_G 3ora_G 3uoq_G* 4gaq_G* 4gas_G* 2qal_G* 1p6g_G 1p87_G ...
Probab=34.54 E-value=42 Score=24.41 Aligned_cols=34 Identities=6% Similarity=0.070 Sum_probs=28.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q psy14916 7 NSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLR 44 (130)
Q Consensus 7 ~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~ 44 (130)
.|+..++.+++.+||+.|-.. .|.||++++.+-.
T Consensus 33 ~GKKs~A~~Iv~~A~~~I~~k----t~~nPl~vl~~AI 66 (179)
T 3i1m_G 33 DGKKSTAESIVYSALETLAQR----SGKSELEAFEVAL 66 (179)
T ss_dssp TTCHHHHHHHHHHHHHHHHHH----HCSCSHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHH----hCCCHHHHHHHHH
Confidence 699999999999999998544 5889999987643
No 32
>3u5c_F RP14, S2, YS8, 40S ribosomal protein S5; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_F 3o30_D 3o2z_D 3u5g_F 3jyv_G* 2noq_F 1s1h_G 3iz6_F
Probab=33.26 E-value=50 Score=24.93 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=28.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q psy14916 7 NSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKL 43 (130)
Q Consensus 7 ~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL 43 (130)
.|+..++.+++.+||+.|-. ..|.||++++.+-
T Consensus 104 ~GKKs~A~~Ivy~AfeiI~~----kT~~nPl~Vl~~A 136 (225)
T 3u5c_F 104 NGKKLKAVRIIKHTLDIINV----LTDQNPIQVVVDA 136 (225)
T ss_dssp SSCHHHHHHHHHHHHHHHHH----TTCSCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHH----hcCCCceeHHHHH
Confidence 59999999999999998854 4789999998764
No 33
>3r8n_G 30S ribosomal protein S7; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_G* 3j18_G 3oaq_G 3ofa_G 3ofx_G 3ofo_G 3r8o_G 4gd1_G 4gd2_G 3sfs_G* 3ofp_G 3fih_G* 2wwl_G 3oar_G 3ofb_G 3ofy_G 4a2i_G 2gy9_G 2gyb_G
Probab=33.09 E-value=33 Score=24.17 Aligned_cols=34 Identities=6% Similarity=0.075 Sum_probs=28.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q psy14916 7 NSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLR 44 (130)
Q Consensus 7 ~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~ 44 (130)
.|+..++.+++.+||+.|-. -.|.||++++.+-.
T Consensus 32 ~GKK~~A~~Iv~~a~~~I~~----kt~~nPl~vl~~Ai 65 (151)
T 3r8n_G 32 DGKKSTAESIVYSALETLAQ----RSGKSELEAFEVAL 65 (151)
T ss_dssp TTCHHHHHHHHHHHHHHHHT----TTCSCSHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHH----HhCCCHHHHHHHHH
Confidence 69999999999999998853 46899999987643
No 34
>3gty_S TF, 30S ribosomal protein S7; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima}
Probab=31.58 E-value=39 Score=23.70 Aligned_cols=34 Identities=9% Similarity=0.155 Sum_probs=28.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q psy14916 7 NSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLR 44 (130)
Q Consensus 7 ~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~ 44 (130)
.|+..++.+++.+||+.|- +-.|.||++++.+-.
T Consensus 26 ~GKK~~A~~Iv~~a~~~I~----~kt~~nPl~vl~~Ai 59 (149)
T 3gty_S 26 DGKKTIAQKIVYGAFDIIR----EKTKKDPLEVFRQAV 59 (149)
T ss_dssp TTBTTTHHHHHHHHHHHHH----HTTSSCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHH----HHcCCcHHHHHHHHH
Confidence 6889999999999999884 346899999988743
No 35
>3bei_A Prothrombin; serine protease, acute phase, blood coagulation, cleavage on basic residues, disease mutation, gamma-carboxyglutamic ACI glycoprotein; HET: NAG; 1.55A {Homo sapiens} PDB: 1tq7_A* 3lu9_A* 3bef_A* 2pgq_A* 1z8j_A* 1z8i_A* 3hk3_A 2pv9_A* 3edx_A* 2pux_A 3hk6_A 3hki_A* 2ocv_A* 1avg_L 2a1d_A*
Probab=28.10 E-value=19 Score=20.39 Aligned_cols=9 Identities=56% Similarity=1.228 Sum_probs=7.1
Q ss_pred cccCCCCCC
Q psy14916 122 AYDSGELDC 130 (130)
Q Consensus 122 ~~~~~~~~~ 130 (130)
.+-+||+||
T Consensus 9 tFG~GE~dC 17 (44)
T 3bei_A 9 TFGSGEADC 17 (44)
T ss_dssp HHCSCSTTT
T ss_pred cccCccccc
Confidence 456899998
No 36
>3b9f_L Prothrombin; michaelis complex, acute phase, blood coagulation, cleavage of basic residues, disease mutation; HET: NAG FUC SGN IDS; 1.60A {Homo sapiens} PDB: 1tb6_L* 2b5t_A* 1jou_A* 3gis_A 1jmo_L*
Probab=22.66 E-value=27 Score=20.19 Aligned_cols=9 Identities=56% Similarity=1.228 Sum_probs=6.8
Q ss_pred cccCCCCCC
Q psy14916 122 AYDSGELDC 130 (130)
Q Consensus 122 ~~~~~~~~~ 130 (130)
-.-+||+||
T Consensus 14 tFG~GE~dC 22 (49)
T 3b9f_L 14 TFGSGEADC 22 (49)
T ss_dssp HHCSCSTTT
T ss_pred CCCCccccc
Confidence 456888888
No 37
>1etr_L Epsilon-thrombin; serine proteinase, hydrolase-hydrolase inhibitor complex; HET: MIT; 2.20A {Bos taurus} SCOP: b.47.1.2 PDB: 1bbr_L* 1ets_L* 1ett_L* 1hrt_L 1id5_L 1mkw_L 1mkx_L 1tbq_L 1tbr_L 1toc_A 1ucy_L* 1uvt_L* 1uvu_L* 1vit_L* 1ycp_L 2ody_A*
Probab=22.47 E-value=27 Score=20.19 Aligned_cols=9 Identities=44% Similarity=1.187 Sum_probs=6.8
Q ss_pred cccCCCCCC
Q psy14916 122 AYDSGELDC 130 (130)
Q Consensus 122 ~~~~~~~~~ 130 (130)
-.-+||+||
T Consensus 14 tFG~GE~dC 22 (49)
T 1etr_L 14 TFGAGEADC 22 (49)
T ss_dssp CCBSCCTTT
T ss_pred CCCCccccc
Confidence 456788888
No 38
>2i15_A A05_ORF129, hypothetical protein Mg296 homolog; structural genomics, MPN423, hypothetical protien, all alpha structure, PSI; 2.40A {Mycoplasma pneumoniae} SCOP: a.291.1.1
Probab=21.37 E-value=1.9e+02 Score=19.35 Aligned_cols=41 Identities=15% Similarity=0.135 Sum_probs=33.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q psy14916 6 LNSREQLAIAEFARSLLVIPKTLAVNAAQDSTDLVAKLRAY 46 (130)
Q Consensus 6 ~~g~eq~~i~~fa~ALe~IP~~LaeNaG~d~~~vl~kL~~~ 46 (130)
-+|..+-|.+.|-+||-.....||-.-|.|+--.-.+|-++
T Consensus 88 pk~~~~~ccq~fyeal~~fisalaitkgi~~~r~hq~l~~r 128 (135)
T 2i15_A 88 PKGDVKSCCQSFYEALTLFISALAITKGVDVGRYHQQLGKR 128 (135)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHTTCCTTHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHh
Confidence 35778899999999999999999999999987655555443
Done!