Query psy14917
Match_columns 407
No_of_seqs 127 out of 1645
Neff 8.6
Searched_HMMs 29240
Date Sat Aug 17 00:15:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14917.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14917hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_A T-complex protein 1 sub 100.0 3.9E-95 1.3E-99 741.1 48.4 405 1-406 17-422 (529)
2 3iyg_G T-complex protein 1 sub 100.0 7.3E-94 2.5E-98 729.5 47.4 398 1-406 16-415 (515)
3 1q3q_A Thermosome alpha subuni 100.0 3.6E-93 1.2E-97 728.7 47.8 398 1-406 30-427 (548)
4 3ko1_A Chaperonin; 9-fold symm 100.0 1.2E-93 4E-98 731.6 42.7 398 1-406 37-434 (553)
5 3iyg_H T-complex protein 1 sub 100.0 8.6E-93 2.9E-97 720.9 46.7 392 1-406 18-416 (515)
6 1a6d_B Thermosome (beta subuni 100.0 3.2E-93 1.1E-97 729.1 43.3 398 1-406 28-425 (543)
7 3ruv_A Chaperonin, CPN; double 100.0 8.7E-93 3E-97 725.2 45.7 395 1-406 26-420 (543)
8 1a6d_A Thermosome (alpha subun 100.0 9.3E-93 3.2E-97 725.2 45.9 396 1-406 29-424 (545)
9 3iyg_B T-complex protein 1 sub 100.0 7.1E-92 2.4E-96 714.5 47.7 391 1-406 17-413 (513)
10 3iyg_D T-complex protein 1 sub 100.0 6E-92 2.1E-96 715.9 46.4 396 1-406 18-420 (518)
11 3iyg_E T-complex protein 1 sub 100.0 1.6E-91 5.4E-96 712.9 46.8 396 1-406 17-416 (515)
12 3p9d_A T-complex protein 1 sub 100.0 2.5E-92 8.6E-97 723.3 38.4 399 1-406 31-438 (559)
13 3iyg_Z T-complex protein 1 sub 100.0 2.1E-91 7.1E-96 711.1 44.0 394 1-406 17-419 (517)
14 3p9d_D T-complex protein 1 sub 100.0 5.2E-92 1.8E-96 717.2 37.5 396 1-406 26-430 (528)
15 3p9d_H T-complex protein 1 sub 100.0 6.6E-91 2.3E-95 714.1 39.6 396 1-406 33-439 (568)
16 3p9d_E T-complex protein 1 sub 100.0 9.5E-91 3.3E-95 712.1 40.3 396 1-406 52-459 (562)
17 3p9d_G T-complex protein 1 sub 100.0 1.4E-91 4.8E-96 716.6 31.9 393 1-406 31-429 (550)
18 3iyg_Q T-complex protein 1 sub 100.0 4.8E-89 1.6E-93 694.2 47.1 392 1-406 18-412 (512)
19 3p9d_C T-complex protein 1 sub 100.0 1.3E-90 4.4E-95 710.9 34.2 399 1-406 26-488 (590)
20 3p9d_F T-complex protein 1 sub 100.0 1.2E-90 4.1E-95 710.5 32.5 394 1-404 24-429 (546)
21 3p9d_B T-complex protein 1 sub 100.0 7.3E-89 2.5E-93 695.2 28.0 391 1-406 24-420 (527)
22 3aq1_B Thermosome subunit; gro 100.0 6.3E-86 2.1E-90 669.0 32.9 377 22-406 1-378 (500)
23 1we3_A CPN60(groel); chaperoni 100.0 4.3E-74 1.5E-78 585.4 37.0 350 1-406 17-429 (543)
24 1kp8_A Groel protein; chaperon 100.0 3.3E-74 1.1E-78 585.4 35.9 350 1-405 17-429 (547)
25 1iok_A Chaperonin 60; chaperon 100.0 1.3E-74 4.4E-79 588.9 26.2 350 1-405 18-430 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 4.8E-73 1.6E-77 575.4 26.5 350 1-405 17-428 (546)
27 1gml_A T-complex protein 1 sub 100.0 1.3E-42 4.4E-47 304.8 17.9 173 183-361 1-174 (178)
28 1ass_A Thermosome; chaperonin, 100.0 1.2E-36 4.1E-41 261.6 13.8 154 189-348 1-154 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 99.1 3.8E-10 1.3E-14 97.0 9.8 149 186-375 2-169 (194)
30 3osx_A 60 kDa chaperonin; alph 99.0 1.7E-09 6E-14 93.1 11.3 145 190-375 13-176 (201)
31 1srv_A Protein (groel (HSP60 c 98.9 1.6E-09 5.4E-14 88.8 7.1 116 191-331 1-134 (145)
32 1o13_A Probable NIFB protein; 82.4 3 0.0001 33.7 6.5 53 251-304 67-119 (136)
33 1eo1_A Hypothetical protein MT 82.2 4.9 0.00017 31.6 7.6 52 252-304 57-108 (124)
34 2yx6_A Hypothetical protein PH 81.5 3.6 0.00012 32.3 6.6 53 251-304 54-106 (121)
35 2wfb_A Putative uncharacterize 78.1 4.4 0.00015 31.7 6.0 53 251-304 58-111 (120)
36 1rdu_A Conserved hypothetical 73.5 5.4 0.00018 30.9 5.3 52 252-304 54-105 (116)
37 2re2_A Uncharacterized protein 72.8 7.5 0.00026 31.2 6.2 52 251-304 70-121 (136)
38 2qtd_A Uncharacterized protein 63.3 17 0.0006 27.4 6.2 49 254-304 50-98 (105)
39 3v7e_A Ribosome-associated pro 58.1 25 0.00087 25.3 6.0 48 250-297 17-68 (82)
40 2xzm_U Ribosomal protein L7AE 58.1 29 0.001 27.4 6.8 50 250-302 30-84 (126)
41 2lbw_A H/ACA ribonucleoprotein 57.6 29 0.00099 27.1 6.7 50 250-302 26-80 (121)
42 3psh_A Protein HI_1472; substr 57.0 20 0.00068 32.9 6.7 52 253-304 77-154 (326)
43 3v7q_A Probable ribosomal prot 56.2 35 0.0012 25.6 6.8 52 250-304 25-80 (101)
44 3on1_A BH2414 protein; structu 54.6 36 0.0012 25.5 6.6 52 250-304 24-79 (101)
45 2ale_A SNU13, NHP2/L7AE family 52.3 25 0.00085 28.1 5.5 51 250-303 38-93 (134)
46 2r79_A Periplasmic binding pro 50.4 36 0.0012 30.4 7.2 52 253-304 52-111 (283)
47 4a18_G RPL30; ribosome, eukary 49.6 56 0.0019 24.6 7.0 52 249-303 27-83 (104)
48 2r7a_A Bacterial heme binding 49.4 34 0.0012 30.0 6.7 52 253-304 52-112 (256)
49 2etv_A Iron(III) ABC transport 49.2 26 0.00089 32.6 6.1 52 253-304 89-151 (346)
50 2q8p_A Iron-regulated surface 48.5 22 0.00075 31.3 5.2 52 253-304 53-110 (260)
51 1xbi_A 50S ribosomal protein L 48.0 41 0.0014 26.2 6.1 48 250-297 35-87 (120)
52 3md9_A Hemin-binding periplasm 45.4 40 0.0014 29.5 6.5 52 253-304 52-111 (255)
53 1n2z_A Vitamin B12 transport p 44.7 31 0.001 30.1 5.5 51 253-303 50-107 (245)
54 2aif_A Ribosomal protein L7A; 44.0 40 0.0014 26.9 5.6 51 250-303 47-102 (135)
55 2wi8_A Iron-uptake system-bind 43.0 46 0.0016 30.2 6.7 52 253-304 89-144 (311)
56 1vq8_F 50S ribosomal protein L 42.5 54 0.0018 25.4 6.0 51 250-303 35-90 (120)
57 2fc3_A 50S ribosomal protein L 41.6 57 0.0019 25.5 6.1 47 250-296 34-85 (124)
58 3iz5_f 60S ribosomal protein L 41.2 62 0.0021 24.9 6.1 50 249-298 31-85 (112)
59 3u5e_c L32, RP73, YL38, 60S ri 39.0 79 0.0027 23.8 6.3 51 250-303 28-83 (105)
60 4hn9_A Iron complex transport 38.8 49 0.0017 30.4 6.2 51 253-304 109-165 (335)
61 3o85_A Ribosomal protein L7AE; 38.3 62 0.0021 25.2 5.8 51 250-303 37-92 (122)
62 1rlg_A 50S ribosomal protein L 37.3 49 0.0017 25.6 5.0 48 250-297 33-85 (119)
63 3cpq_A 50S ribosomal protein L 35.9 1E+02 0.0034 23.4 6.6 51 250-303 27-82 (110)
64 1p90_A NAFY protein, hypotheti 35.5 51 0.0018 26.5 5.0 30 259-289 66-95 (145)
65 2pw9_A Putative formate dehydr 30.6 60 0.0021 29.2 5.0 41 251-291 206-246 (268)
66 1w41_A 50S ribosomal protein L 29.9 1.6E+02 0.0056 21.7 6.8 51 250-303 22-77 (101)
67 2zkr_f 60S ribosomal protein L 29.9 1.1E+02 0.0038 27.3 6.6 51 251-301 142-197 (266)
68 3ff4_A Uncharacterized protein 29.8 75 0.0026 24.7 4.9 39 249-287 71-110 (122)
69 2gjl_A Hypothetical protein PA 29.2 1.4E+02 0.0049 27.2 7.7 57 250-306 86-142 (328)
70 2jnb_A NHP2-like protein 1; sp 28.3 24 0.00082 28.7 1.8 48 250-297 56-108 (144)
71 3jyw_G 60S ribosomal protein L 27.8 52 0.0018 25.4 3.6 52 250-304 31-87 (113)
72 3bo9_A Putative nitroalkan dio 27.4 1.7E+02 0.006 26.7 7.9 56 250-305 92-147 (326)
73 3j21_Z 50S ribosomal protein L 27.3 1.2E+02 0.0041 22.4 5.6 46 250-295 21-71 (99)
74 3izc_H 60S ribosomal protein R 26.6 1.2E+02 0.0041 27.0 6.1 51 250-303 137-192 (256)
75 3gfv_A Uncharacterized ABC tra 24.4 1.1E+02 0.0036 27.5 5.7 51 253-304 88-146 (303)
76 3fst_A 5,10-methylenetetrahydr 23.5 2.4E+02 0.0083 25.6 7.9 58 246-307 166-233 (304)
77 4hb7_A Dihydropteroate synthas 22.8 1.9E+02 0.0064 26.0 6.8 62 243-306 64-129 (270)
78 2x4l_A Ferric-siderophore rece 22.1 1.4E+02 0.0046 27.1 6.0 51 253-304 103-169 (325)
79 3tny_A YFIY (ABC transport sys 21.9 57 0.0019 29.4 3.3 52 253-304 89-144 (303)
80 3sl9_C B-cell CLL/lymphoma 9 p 21.5 1.2E+02 0.0042 19.2 3.7 33 357-389 9-41 (55)
81 1gtz_A 3-dehydroquinate dehydr 21.3 52 0.0018 27.0 2.5 65 204-281 1-69 (156)
82 1r3s_A URO-D, uroporphyrinogen 20.7 1.5E+02 0.0052 27.6 6.1 66 234-303 225-297 (367)
83 2chu_A CEUE, enterochelin upta 20.4 1.7E+02 0.0058 26.0 6.2 51 253-304 88-146 (296)
No 1
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.9e-95 Score=741.05 Aligned_cols=405 Identities=78% Similarity=1.146 Sum_probs=388.8
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
+||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++||+++||+
T Consensus 17 ~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~GDGTTtvvvLA~eLL~ 96 (529)
T 3iyg_A 17 MAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLK 96 (529)
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHh-hccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhcc
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQ-QLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIKI 159 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~-~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~~ 159 (407)
++.+++++|+||+.|++||+.|++.++++|++ + +++++..+++.|.++|+|+++||+.++|+++|++++++|+.++++
T Consensus 97 ~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~-s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~ 175 (529)
T 3iyg_A 97 NADELVKQKIHPTSVISGYRLACKEAVRYISENL-IINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKY 175 (529)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhc-ccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999 7 999876789999999999999999999999999999999999985
Q ss_pred cccCCCccccCCceEEEEcCCCCCCCceeEeeEEEecccccccccccccCceEEEEeecccccccccCeEEEecCHHHHH
Q psy14917 160 TEKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKLD 239 (407)
Q Consensus 160 ~~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~~ 239 (407)
...+|...+|+++|+|++++|+++.||++++|++|++++.+++||++++||||++++++|++++++.++++.++++++++
T Consensus 176 ~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~ 255 (529)
T 3iyg_A 176 TDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLD 255 (529)
T ss_pred hccCCCcccccceEEEEEecCCCccceEEEeeeEEecCcccccCCcccCCceEEEecCCcccccccCCceEEeCCHHHHH
Confidence 43334445788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCCccccC
Q psy14917 240 GIRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEGEESFE 319 (407)
Q Consensus 240 ~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~~~~ 319 (407)
.+.++|++++++++++|++.|+||||++++|++.+++||.++||++++++++++|+|||++|||+++++++++++.+++.
T Consensus 256 ~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~~tGa~iv~~~~~l~~~e~~~ 335 (529)
T 3iyg_A 256 QIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATVLSTLANLEGEETFE 335 (529)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHHHhCCeeecchhcccchhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887644566
Q ss_pred CCCceeeeeEEEEEecCeeEEEEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHHHHHHH
Q psy14917 320 ASSLGEAAEVVQTQVCDDELILINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVEAALSI 399 (407)
Q Consensus 320 ~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E~~la~ 399 (407)
+.++|+|+.|+++++|+++|++|++|+++++|||+|||+++++++|.||+++||++++|+++++|++||||||+|++||+
T Consensus 336 ~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~ 415 (529)
T 3iyg_A 336 ASMLGQAEEVVQERICDDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSI 415 (529)
T ss_pred hhhCccceEEEEEEeCCceEEEEEcCCCCceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHH
Confidence 66799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhc
Q psy14917 400 YLENFAT 406 (407)
Q Consensus 400 ~l~~~a~ 406 (407)
+|+++|+
T Consensus 416 ~L~~~~~ 422 (529)
T 3iyg_A 416 YLENYAT 422 (529)
T ss_pred HHHHHhh
Confidence 9999985
No 2
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.3e-94 Score=729.48 Aligned_cols=398 Identities=33% Similarity=0.534 Sum_probs=383.5
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
+||+.|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||||||+++|+++||+
T Consensus 16 ~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLAgeLL~ 95 (515)
T 3iyg_G 16 NAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLS 95 (515)
T ss_pred HHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhccc
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIKIT 160 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~~~ 160 (407)
++.+++++|+||+.|++||+.|++.++++|+++ +++++..+++.|.++|+|+++||.++.|.+.+++++++|+..+.++
T Consensus 96 ~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~ 174 (515)
T 3iyg_G 96 VAEHFLEQQMHPTVVISAYRKALDDMISTLKKI-SIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFE 174 (515)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-hcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999999 9999877899999999999999999999999999999999998743
Q ss_pred ccCCCccccCC-ceEEEEcCCCCCCCceeEeeEEEecccccccccccccCceEEEEeecccccccccCeEEEecCHHHHH
Q psy14917 161 EKSGNVTYPIK-AINLLKAHGKSARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKLD 239 (407)
Q Consensus 161 ~~~~~~~~~~~-~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~~ 239 (407)
.. +...+|++ +|+|++++||++.||++++|++|++++.++.||++++||||++++++|++++++.++++.+++++++.
T Consensus 175 ~~-~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~ 253 (515)
T 3iyg_G 175 EN-GRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFT 253 (515)
T ss_pred cC-CCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCCCcceeeeeEEEEEcccccccccccCceEEeCCHHHHH
Confidence 22 22345654 49999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCCccccC
Q psy14917 240 GIRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEGEESFE 319 (407)
Q Consensus 240 ~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~~~~ 319 (407)
++.++|++++++++++|++.|++|||++++|++.+++||.++||++++++++++|+|||++|||+++++++++++++
T Consensus 254 ~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~tGa~ii~~l~~l~~~~--- 330 (515)
T 3iyg_G 254 RILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREED--- 330 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHHhCCeeeccccccChhh---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCcee-eeeEEEEEecCeeEEEEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHHHHHH
Q psy14917 320 ASSLGE-AAEVVQTQVCDDELILINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVEAALS 398 (407)
Q Consensus 320 ~~~lG~-~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E~~la 398 (407)
+|+ |+.|++.++|+++|+||++|+++++|||+|||+|+++++|.||+++||++++|++++++++||||||+|+++|
T Consensus 331 ---LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~ 407 (515)
T 3iyg_G 331 ---VGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVA 407 (515)
T ss_pred ---cCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhc
Q psy14917 399 IYLENFAT 406 (407)
Q Consensus 399 ~~l~~~a~ 406 (407)
++|+++++
T Consensus 408 ~~L~~~~~ 415 (515)
T 3iyg_G 408 HALTEKSK 415 (515)
T ss_pred HHHHHHhh
Confidence 99999875
No 3
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=3.6e-93 Score=728.69 Aligned_cols=398 Identities=38% Similarity=0.633 Sum_probs=386.1
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
+||..|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+++||+
T Consensus 30 ~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~ 109 (548)
T 1q3q_A 30 LAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLR 109 (548)
T ss_dssp HHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhccc
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIKIT 160 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~~~ 160 (407)
++.+++++|+||+.|++||+.|++.++++|+++ +++++..+++.|.++|+|+++||+.++|+++|++++++|+.+++++
T Consensus 110 ~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~ 188 (548)
T 1q3q_A 110 KAEELLDQNIHPSIITKGYALAAEKAQEILDEI-AIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEK 188 (548)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH-CEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEE
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999 9998767899999999999999999999999999999999999865
Q ss_pred ccCCCccccCCceEEEEcCCCCCCCceeEeeEEEecccccccccccccCceEEEEeecccccccccCeEEEecCHHHHHH
Q psy14917 161 EKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKLDG 240 (407)
Q Consensus 161 ~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~~~ 240 (407)
.. |...+|+++|+|++++|++++||++++|++|++++.+++||++++||||++++++|++++++.++++.++++++++.
T Consensus 189 ~~-g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~ 267 (548)
T 1q3q_A 189 KD-GKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMS 267 (548)
T ss_dssp SS-SSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTTSCSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHH
T ss_pred cC-CCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCCCcceecCCEEEEEecCcCcccccCCceEEeCCHHHHHH
Confidence 31 32357888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCCccccCC
Q psy14917 241 IRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEGEESFEA 320 (407)
Q Consensus 241 ~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~~~~~ 320 (407)
+.++|++++++++++|++.|++|||++++|++.+++||.++||++++++++++|+|||++|||+++++++++++++
T Consensus 268 ~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~l~~~~~~~---- 343 (548)
T 1q3q_A 268 FLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPED---- 343 (548)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSSGGGCCGGG----
T ss_pred HHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEEccCCHHHHHHHHHHhCCeEecccccCCHHH----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceeeeeEEEEEecCeeEEEEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHHHHHHHH
Q psy14917 321 SSLGEAAEVVQTQVCDDELILINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVEAALSIY 400 (407)
Q Consensus 321 ~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E~~la~~ 400 (407)
||+|+.|++.++|+++|++|++|+++++|||+|||+|+++++|.||+++||++++|+++++|++|||||++|++|+.+
T Consensus 344 --LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~ 421 (548)
T 1q3q_A 344 --LGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIR 421 (548)
T ss_dssp --CEEESEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHH
T ss_pred --CCCceEEEEEEecCceEEEEecCCCCCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhc
Q psy14917 401 LENFAT 406 (407)
Q Consensus 401 l~~~a~ 406 (407)
|+++++
T Consensus 422 L~~~~~ 427 (548)
T 1q3q_A 422 LDEYAK 427 (548)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999874
No 4
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.2e-93 Score=731.60 Aligned_cols=398 Identities=38% Similarity=0.612 Sum_probs=386.1
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
.||..|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++||+++||+
T Consensus 37 ~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~ 116 (553)
T 3ko1_A 37 AAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVK 116 (553)
T ss_dssp HHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHHHHHHHHHHHTCSSSSSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChhHHHHHHHhhCCcccccCCceeEEEehHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhccc
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIKIT 160 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~~~ 160 (407)
++.+++++|+||+.|++||+.|++.++++|+++ +++++..+++.|.++|+|+++||+.+.|+++|++|+++|+.+++++
T Consensus 117 ~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~ 195 (553)
T 3ko1_A 117 KAEDLLYKDVHPTIIISGYKKAEEVALQTIQEL-AQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAEL 195 (553)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCC
T ss_pred hHHHHHhcCCCceEEehhhhHHHHHHHHHHHHh-cCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999 9998777899999999999999999999999999999999999875
Q ss_pred ccCCCccccCCceEEEEcCCCCCCCceeEeeEEEecccccccccccccCceEEEEeecccccccccCeEEEecCHHHHHH
Q psy14917 161 EKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKLDG 240 (407)
Q Consensus 161 ~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~~~ 240 (407)
. +|...+|+++|+|++++|+++.||++++|++|++++.+++||+.++||||++++++|++++++.++++.+++++++++
T Consensus 196 ~-~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~ 274 (553)
T 3ko1_A 196 R-GDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQK 274 (553)
T ss_dssp T-TSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTSCSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHH
T ss_pred c-CCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCCccccccceEEEecCcccccCcccCceEEeCCHHHHHH
Confidence 2 243458889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCCccccCC
Q psy14917 241 IRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEGEESFEA 320 (407)
Q Consensus 241 ~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~~~~~ 320 (407)
+.++|++++++++++|.+.|+||||++++|++.+++||.++||++++++++++|+|||++|||+++++++++++++
T Consensus 275 ~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~k~~leria~~tGa~ivs~l~~l~~~~---- 350 (553)
T 3ko1_A 275 FLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVSNIDEISEQD---- 350 (553)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCCHHHHHHHHTTTTCCEESCGGGCCSSS----
T ss_pred HHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhhhhhhHHHHHHhhCCeeecccccCChhh----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCceeeeeEEEEEecCeeEEEEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHHHHHHHH
Q psy14917 321 SSLGEAAEVVQTQVCDDELILINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVEAALSIY 400 (407)
Q Consensus 321 ~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E~~la~~ 400 (407)
||+|+.|+++++|+++|+||++|++++.|||+|||+|+++++|.||+++||++++|+++++|++|||||++|++||.+
T Consensus 351 --LG~a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~ 428 (553)
T 3ko1_A 351 --LGYASLIEERKVGEDKMVFVEGAKNPKSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKK 428 (553)
T ss_dssp --SEECSEEECCCCSSSCCEEEESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHH
T ss_pred --cchHHHHHHhhcCcceEEEeccCCCCceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhc
Q psy14917 401 LENFAT 406 (407)
Q Consensus 401 l~~~a~ 406 (407)
|+++++
T Consensus 429 L~~~~~ 434 (553)
T 3ko1_A 429 LRKYAP 434 (553)
T ss_dssp HHHHHH
T ss_pred HHHhcc
Confidence 999874
No 5
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.6e-93 Score=720.93 Aligned_cols=392 Identities=38% Similarity=0.576 Sum_probs=379.7
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
+||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++||+++||+
T Consensus 18 ~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~ 97 (515)
T 3iyg_H 18 SACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLK 97 (515)
T ss_pred HHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhceeCcchhhHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCC----HHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHH
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELG----KECLINAAKTSMSSKLIGPDDNFFATMVVDAAQA 156 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~----~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~ 156 (407)
++.+++++|+||+.|++||+.|++.++++|+++ +++++..+ ++.|.++|+|+++||+++.|+++|++++++|+.+
T Consensus 98 ~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~ 176 (515)
T 3iyg_H 98 QVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEI-AVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMM 176 (515)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-hcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 99886445 7888999999999999999999999999999999
Q ss_pred hcccccCCCccccCCceEEEEcCCCCCCCceeEeeEEEecccccccc---cccccCceEEEEeecccccccccCeEEEec
Q psy14917 157 IKITEKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAM---KKKITNAKIACLDFSLQKAKMKLGVEVLVN 233 (407)
Q Consensus 157 v~~~~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~---~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~ 233 (407)
++. ++|+++|+|++++||++.||++++|++|++++.+|+| |+.++||||++++++|++++++.++++.++
T Consensus 177 V~~-------~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le~~k~e~~~~v~is 249 (515)
T 3iyg_H 177 LDD-------LLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKAEKDNAEIRVH 249 (515)
T ss_pred hcc-------cCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEcccccccccccCceEEeC
Confidence 963 3677899999999999999999999999999999865 789999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCC
Q psy14917 234 DPEKLDGIRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNME 313 (407)
Q Consensus 234 ~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~ 313 (407)
++++++++.++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|+|||++|||++++++++++
T Consensus 250 ~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~leria~~tGa~ii~~l~~~~ 329 (515)
T 3iyg_H 250 TVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALS 329 (515)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHHHHHHhCCEEeeccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCceeeeeEEEEEecCeeEEEEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHH
Q psy14917 314 GEESFEASSLGEAAEVVQTQVCDDELILINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAV 393 (407)
Q Consensus 314 ~~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~ 393 (407)
+++ +|+|+.|++.++|+++|++|++|+++++|||+|||+|+++++|.||+++||++++|++++++++||||||+
T Consensus 330 ~~~------LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~ 403 (515)
T 3iyg_H 330 SDV------LGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAI 403 (515)
T ss_pred HHH------CCcccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHH
Confidence 887 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhc
Q psy14917 394 EAALSIYLENFAT 406 (407)
Q Consensus 394 E~~la~~l~~~a~ 406 (407)
|+++|++|+++++
T Consensus 404 e~~~s~~L~~~~~ 416 (515)
T 3iyg_H 404 EMELSKYLRDYSR 416 (515)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
No 6
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=3.2e-93 Score=729.09 Aligned_cols=398 Identities=38% Similarity=0.611 Sum_probs=385.5
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
.||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+++||+
T Consensus 28 ~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~ 107 (543)
T 1a6d_B 28 EAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQ 107 (543)
T ss_dssp HHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHHHHTCTTCCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHH
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhccc
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIKIT 160 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~~~ 160 (407)
++.+++++|+||+.|++||+.|++.++++|+++ +++++..+++.|.++|+|+++||+.++|+++|++++++|+.+++++
T Consensus 108 ~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~-a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~ 186 (543)
T 1a6d_B 108 QAQGLINQNVHPTVISEGYRMASEEAKRVIDEI-STKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAEL 186 (543)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH-CEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEE
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999 9998766799999999999999999999999999999999999865
Q ss_pred ccCCCccccCCceEEEEcCCCCCCCceeEeeEEEecccccccccccccCceEEEEeecccccccccCeEEEecCHHHHHH
Q psy14917 161 EKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKLDG 240 (407)
Q Consensus 161 ~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~~~ 240 (407)
. +|...+|+++|+|++++|++++||++++|++|++++.+++||++++||||++++++|++++++.++++.++++++++.
T Consensus 187 ~-~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~ 265 (543)
T 1a6d_B 187 R-DGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQK 265 (543)
T ss_dssp C-SSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHH
T ss_pred c-cCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCCcceecCCeEEEEecccccccccCCceEEeCCHHHHHH
Confidence 2 122347888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCCccccCC
Q psy14917 241 IRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEGEESFEA 320 (407)
Q Consensus 241 ~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~~~~~ 320 (407)
+.++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|+|||++|||+++++++++++++
T Consensus 266 ~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~~le~ia~~tGa~iis~l~~l~~~~---- 341 (543)
T 1a6d_B 266 FLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEISSSD---- 341 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCEESCGGGCCGGG----
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHHHHHHHHHHhCCceecccccCCHHH----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceeeeeEEEEEecCeeEEEEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHHHHHHHH
Q psy14917 321 SSLGEAAEVVQTQVCDDELILINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVEAALSIY 400 (407)
Q Consensus 321 ~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E~~la~~ 400 (407)
||+|+.|+++++|+++|++|++|+++++|||+|||+|+.+++|.||+++||++++|+++++|++||||||+|++|+.+
T Consensus 342 --LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~ 419 (543)
T 1a6d_B 342 --LGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFR 419 (543)
T ss_dssp --CEEEEEEEEEEETTEEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHH
T ss_pred --CCCceEEEEEEecCceEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhc
Q psy14917 401 LENFAT 406 (407)
Q Consensus 401 l~~~a~ 406 (407)
|+++++
T Consensus 420 L~~~~~ 425 (543)
T 1a6d_B 420 LRSYAQ 425 (543)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999874
No 7
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=8.7e-93 Score=725.17 Aligned_cols=395 Identities=38% Similarity=0.621 Sum_probs=384.8
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
+||..|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++||+++||+
T Consensus 26 ~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ 105 (543)
T 3ruv_A 26 LAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLR 105 (543)
T ss_dssp HHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHhhhCCCcccHHHHHHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhccc
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIKIT 160 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~~~ 160 (407)
++.+++++|+||+.|++||+.|++.++++|+++ +++++..+++.|.++|+|+++||+.+.|+++|++++++|+.+++++
T Consensus 106 ~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~ 184 (543)
T 3ruv_A 106 KAEELLDQNVHPTIVVKGYQAAAQKAQELLKTI-ACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDD 184 (543)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHH-CEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHh-hCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999 9998777899999999999999999999999999999999999875
Q ss_pred ccCCCccccCCceEEEEcCCCCCCCceeEeeEEEecccccccccccccCceEEEEeecccccccccCeEEEecCHHHHHH
Q psy14917 161 EKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKLDG 240 (407)
Q Consensus 161 ~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~~~ 240 (407)
+| .+|+++|+|++.+|+++.||++++|++|++++.+++||+.++||||++++++|++++++.++++.+++++++++
T Consensus 185 --~g--~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~ 260 (543)
T 3ruv_A 185 --EG--KVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLME 260 (543)
T ss_dssp --TS--CCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTSCSEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHH
T ss_pred --CC--CcccceEEEEEcCCCCcccceeecceEEeccccCccccccccCcEEEEEcccccccccccCceeEeCCHHHHHH
Confidence 23 27888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCCccccCC
Q psy14917 241 IRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEGEESFEA 320 (407)
Q Consensus 241 ~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~~~~~ 320 (407)
+.++|++++++++++|++.|+||||++++|++.+++||.++||++++++++++|+|||++|||+++++++++++++
T Consensus 261 ~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ia~~tGa~iis~l~~l~~~~---- 336 (543)
T 3ruv_A 261 FIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGANVIAAIAALSAQD---- 336 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCEESCGGGCCGGG----
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHHHHHHHhCCceecccccCCHHH----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCceeeeeEEEEEecCeeEEEEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHHHHHHHH
Q psy14917 321 SSLGEAAEVVQTQVCDDELILINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVEAALSIY 400 (407)
Q Consensus 321 ~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E~~la~~ 400 (407)
||+|+.|+++++|+++|++|++|++++.|||+|||+|+++++|.||+++||++++|+++++|++||||||+|++||.+
T Consensus 337 --LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~ 414 (543)
T 3ruv_A 337 --LGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMK 414 (543)
T ss_dssp --CEEEEEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHH
T ss_pred --CCcccEEEEEEeCCceEEEEECCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhc
Q psy14917 401 LENFAT 406 (407)
Q Consensus 401 l~~~a~ 406 (407)
|+++++
T Consensus 415 L~~~~~ 420 (543)
T 3ruv_A 415 LREYAE 420 (543)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999875
No 8
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=9.3e-93 Score=725.24 Aligned_cols=396 Identities=39% Similarity=0.624 Sum_probs=384.5
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
.||..|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+++||+
T Consensus 29 ~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~ 108 (545)
T 1a6d_A 29 EAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLK 108 (545)
T ss_dssp HHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGGGGCTTTCSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHH
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhccc
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIKIT 160 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~~~ 160 (407)
++.+++++|+||+.|++||+.|++.++++|+++ +++ + .+++.|.++|+|+++||+.++|+++|++|+++|+.+++++
T Consensus 109 ~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~-~-~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~ 185 (545)
T 1a6d_A 109 QAETLLDQGVHPTVISNGYRLAVNEARKIIDEI-AEK-S-TDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEV 185 (545)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHH-CEE-C-CCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEE
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cCC-C-CCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999 988 6 7899999999999999999999999999999999999865
Q ss_pred ccCCCccccCCceEEEEcCCCCCCCceeEeeEEEecccccccccccccCceEEEEeecccccccccCeEEEecCHHHHHH
Q psy14917 161 EKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKLDG 240 (407)
Q Consensus 161 ~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~~~ 240 (407)
.. |...+|+++|+|++++|++++||++++|++|++++.+++||++++||||++++++|++++++.++++.++++++++.
T Consensus 186 ~~-g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~ 264 (545)
T 1a6d_A 186 RD-GKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQD 264 (545)
T ss_dssp SS-SSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTTSCSEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHH
T ss_pred cC-CCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCCCcceecCCEEEEEecCCCcccccCCceEEeCCHHHHHH
Confidence 32 22357888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCCccccCC
Q psy14917 241 IRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEGEESFEA 320 (407)
Q Consensus 241 ~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~~~~~ 320 (407)
+.++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|+|||++|||+++++++++++++
T Consensus 265 ~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~---- 340 (545)
T 1a6d_A 265 FLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSV---- 340 (545)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHHHHHHHHHHCCCEESSGGGCCGGG----
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHHHHHHHHHhCCeeecccccCCHHH----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceeeeeEEEEEecCeeEEEEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHHHHHHHH
Q psy14917 321 SSLGEAAEVVQTQVCDDELILINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVEAALSIY 400 (407)
Q Consensus 321 ~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E~~la~~ 400 (407)
||+|+.|+++++|+++|++|++|+++++|||+|||+|+++++|.||+++||++++|+++++|++|||||++|++|+++
T Consensus 341 --LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~ 418 (545)
T 1a6d_A 341 --LGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMR 418 (545)
T ss_dssp --CEEEEEEEEEEETTEEEEEEEEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHH
T ss_pred --CCCceEEEEEEecCceEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhc
Q psy14917 401 LENFAT 406 (407)
Q Consensus 401 l~~~a~ 406 (407)
|+++++
T Consensus 419 L~~~~~ 424 (545)
T 1a6d_A 419 LAKYAN 424 (545)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999985
No 9
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=7.1e-92 Score=714.54 Aligned_cols=391 Identities=35% Similarity=0.549 Sum_probs=379.3
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCC--CCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDI--GDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAEL 78 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~--g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~l 78 (407)
+||..|++++||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++||+++||||||++||+++|
T Consensus 17 ~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~e~GDGTTtvvVLA~~L 96 (513)
T 3iyg_B 17 IGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAEL 96 (513)
T ss_pred HHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhhhhCCChhhhHHHHHHH
Confidence 379999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCC---CHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHH
Q psy14917 79 LKNADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDEL---GKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQ 155 (407)
Q Consensus 79 l~~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~---~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~ 155 (407)
|+++.+++++|+||+.|++||+.|++.++++|+++ +++++.. +++.|.++|+|+++||+.++|+++|++++++|+.
T Consensus 97 L~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~ 175 (513)
T 3iyg_B 97 LREAESLIAKKIHPQTIIAGWREATKAARQALLNS-AVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVL 175 (513)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-CcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 9888632 6889999999999999999999999999999999
Q ss_pred HhcccccCCCccccCCceEEEEcCCCCCCCceeEeeEEEecccccccccccccCceEEEEeecccccccc-cCeEEEecC
Q psy14917 156 AIKITEKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMK-LGVEVLVND 234 (407)
Q Consensus 156 ~v~~~~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~-~~~~~~i~~ 234 (407)
+++++ +|+++|+|++++||++.||++++|++|++++.++ ||++++||||++++++|++++++ .++++.+++
T Consensus 176 ~V~~~-------~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~-m~~~~en~kIll~~~~Le~~k~e~~~~~v~iss 247 (513)
T 3iyg_B 176 RLKGS-------GNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVN-QPKRIENAKILIANTGMDTDKIKIFGSRVRVDS 247 (513)
T ss_pred Hhccc-------CCcCeEEEEEeCCCCccceeEEeeEEEeccccCC-CceeecCceEEEEcCCcccccccccCCceEEcC
Confidence 99853 6778999999999999999999999999999887 99999999999999999999999 999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCC
Q psy14917 235 PEKLDGIRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEG 314 (407)
Q Consensus 235 ~~~~~~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~ 314 (407)
++++.++.++|++++++++++|++.|++|||++++|++.+++||.++||++++++++.+|+|||++|||+++++++++++
T Consensus 248 ~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~tGa~ii~~l~~l~~ 327 (513)
T 3iyg_B 248 TAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGEIASTFDHPEL 327 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHhCCEEecccccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccCCCCceeeeeEEEEEecCeeEEEEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHH
Q psy14917 315 EESFEASSLGEAAEVVQTQVCDDELILINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVE 394 (407)
Q Consensus 315 ~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E 394 (407)
++ +|+|+.|+++.+|+++|++|++|+++++|||+|||+|+++++|.||+++||++++|++++++++||||||+|
T Consensus 328 ~~------LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e 401 (513)
T 3iyg_B 328 VK------LGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSE 401 (513)
T ss_pred hH------CCcccEEEEEEECCeEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHH
Confidence 87 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhc
Q psy14917 395 AALSIYLENFAT 406 (407)
Q Consensus 395 ~~la~~l~~~a~ 406 (407)
++||++|+++++
T Consensus 402 ~~~~~~L~~~~~ 413 (513)
T 3iyg_B 402 MLMAHAVTQLAS 413 (513)
T ss_pred HHHHHHHHHHhh
Confidence 999999999875
No 10
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6e-92 Score=715.87 Aligned_cols=396 Identities=34% Similarity=0.564 Sum_probs=382.8
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
+||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++||+++||+
T Consensus 18 ~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~ 97 (518)
T 3iyg_D 18 SAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLD 97 (518)
T ss_pred HHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhCCCceeHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhccc
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIKIT 160 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~~~ 160 (407)
++.+++++|+||+.|++||+.|++.++++|+++ +++++..+++.|.++|+|+++||+.++|.++|++++++|+.++++.
T Consensus 98 ~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~ 176 (518)
T 3iyg_D 98 SCTKLLQKGIHPTIISESFQKALEKGIEILTDM-SRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDP 176 (518)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-eeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999 9999777899999999999999999999999999999999999853
Q ss_pred ccCCCccccCCceEEEEcCCCCCCCceeEeeEEEecccccccccccccCceEEEEeecccccccccCeEEEecCHHHHHH
Q psy14917 161 EKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKLDG 240 (407)
Q Consensus 161 ~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~~~ 240 (407)
..++ .+|+++|+|++++||++.||++++|++|++++.+ +||+.++||||++++++|++++++.+.++.++++++++.
T Consensus 177 ~~~~--~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~-~mp~~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~ 253 (518)
T 3iyg_D 177 ATAT--SVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVAN-SGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDR 253 (518)
T ss_pred ccCC--CcccceEEEEEcCCCChhhheEeccEEEeccccc-CCCccccCceEEEEEeeccccccccCceEEecCHHHHHH
Confidence 2223 4788899999999999999999999999999998 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEe-----CCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCCc
Q psy14917 241 IRARESDITKERINKILATGANVILV-----SGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEGE 315 (407)
Q Consensus 241 ~~~~E~~~l~~~v~~i~~~~~~lVi~-----~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~~ 315 (407)
+.++|++++++++++|.+.|+||||+ +++|++.+++||.++||++++++++.+|+|||++|||++++++++++++
T Consensus 254 ~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia~~tGa~ii~~l~~l~~~ 333 (518)
T 3iyg_D 254 VLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTIGTKPVAHVDQFTAD 333 (518)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHHHHhCCEEecccccCCHH
Confidence 99999999999999999999999999 8999999999999999999999999999999999999999999999988
Q ss_pred cccCCCCceeeeeEEEEEecC-eeEEEEECCCC-CCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHH
Q psy14917 316 ESFEASSLGEAAEVVQTQVCD-DELILINGPKA-RTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAV 393 (407)
Q Consensus 316 ~~~~~~~lG~~~~v~~~~~g~-~~~~~~~~~~~-~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~ 393 (407)
+ ||+|+.|++.++|+ ++|++|++|++ +++|||+|||+|+++++|.||+++||++++|+++++|++||||||+
T Consensus 334 ~------LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~ 407 (518)
T 3iyg_D 334 M------LGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAP 407 (518)
T ss_pred H------CCcCcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHH
Confidence 7 99999999999999 89999999998 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhc
Q psy14917 394 EAALSIYLENFAT 406 (407)
Q Consensus 394 E~~la~~l~~~a~ 406 (407)
|++||++|+++++
T Consensus 408 e~~~~~~L~~~~~ 420 (518)
T 3iyg_D 408 EIELALRLTEYSR 420 (518)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999875
No 11
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-91 Score=712.92 Aligned_cols=396 Identities=35% Similarity=0.518 Sum_probs=382.2
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
.||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++||+++||+
T Consensus 17 ~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~ 96 (515)
T 3iyg_E 17 MAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLE 96 (515)
T ss_pred HHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCC--CCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhc
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDE--LGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIK 158 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~--~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~ 158 (407)
++.+++++|+||+.|++||+.|++.++++|+++ +++++. .+++.|.++|+|+++||.++.|.++|++++++|+..+.
T Consensus 97 ~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~ 175 (515)
T 3iyg_E 97 EAEQLLDRGIHPIRIADGYEQAARIAIEHLDKI-SDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVA 175 (515)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-ceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999 987743 46889999999999999999999999999999999997
Q ss_pred ccccCCCccccCCceEEEEcCCCCCCCceeEeeEEEecccccccccccccCceEEEEeecccccccccCeEEEecCHHHH
Q psy14917 159 ITEKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKL 238 (407)
Q Consensus 159 ~~~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~ 238 (407)
+... ..+|+++|+|++++||++.||++++|++|++++.+++||+..++|||+++++||++.+++.++++.+++++++
T Consensus 176 ~~~~---~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l 252 (515)
T 3iyg_E 176 DMQR---RDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDF 252 (515)
T ss_pred cccc---CCCCcccEEEEEecCCCcccceEEeeEEEecccccccccccCCCceEEEEcCccccccccccceeeeCCHHHH
Confidence 6432 1478889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCCcccc
Q psy14917 239 DGIRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEGEESF 318 (407)
Q Consensus 239 ~~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~~~ 318 (407)
+.+.++|+++++++++++.+.|++|||++++|++.+++||.++||++++++++.+|+|||++|||+++++++++++++
T Consensus 253 ~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa~ii~~l~~l~~~~-- 330 (515)
T 3iyg_E 253 KALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEK-- 330 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEecccccCCHHH--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCceeeeeEEEEEecC--eeEEEEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHHHH
Q psy14917 319 EASSLGEAAEVVQTQVCD--DELILINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVEAA 396 (407)
Q Consensus 319 ~~~~lG~~~~v~~~~~g~--~~~~~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E~~ 396 (407)
+|+|+.|+++++|+ ++|++|++|++++.|||+|||+|+++++|.||+++||++++|+++++|++||||||+|++
T Consensus 331 ----LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~ 406 (515)
T 3iyg_E 331 ----LGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEIS 406 (515)
T ss_pred ----CCcceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHH
Confidence 99999999999997 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhc
Q psy14917 397 LSIYLENFAT 406 (407)
Q Consensus 397 la~~l~~~a~ 406 (407)
+|++|+++++
T Consensus 407 ~~~~L~~~~~ 416 (515)
T 3iyg_E 407 CALAVSQEAD 416 (515)
T ss_pred HHHHHHHHhc
Confidence 9999999875
No 12
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=2.5e-92 Score=723.34 Aligned_cols=399 Identities=64% Similarity=0.979 Sum_probs=380.3
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
.||..|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++||+++||+
T Consensus 31 ~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~ 110 (559)
T 3p9d_A 31 LATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLK 110 (559)
T ss_dssp HHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHh-hccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhcc
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQ-QLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIKI 159 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~-~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~~ 159 (407)
++.+++++|+||+.|++||+.|++.++++|++ + +++++..+++.|.++|+|+++||++++|+++|++|+++|+.++++
T Consensus 111 ~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~-s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~ 189 (559)
T 3p9d_A 111 RANELVKNKIHPTTIITGFRVALREAIRFINEVL-STSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKT 189 (559)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHT-GGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhc-ccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999 8 999876678899999999999999999999999999999999985
Q ss_pred cccCCCccccCCceEEEEcCCCCCCCceeEeeEEEeccccccccccccc--CceEEEEeecccccccccCeEEEecCHHH
Q psy14917 160 TEKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAMKKKIT--NAKIACLDFSLQKAKMKLGVEVLVNDPEK 237 (407)
Q Consensus 160 ~~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~--~~kI~l~~~~L~~~~~~~~~~~~i~~~~~ 237 (407)
...+++..+|+++|+|++++|++++||++++|++|++++.+++||+.++ ||||++++++|++++++.++++.++++++
T Consensus 190 ~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~ 269 (559)
T 3p9d_A 190 QNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQ 269 (559)
T ss_dssp EESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTTSCSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSC
T ss_pred cccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCCcceeeccCCceEEEEeccccccccccCceEEeCCHHH
Confidence 2111222478889999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeecccc------CC
Q psy14917 238 LDGIRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSL------SN 311 (407)
Q Consensus 238 ~~~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~------~~ 311 (407)
++.+.++|++++++++++|++.|++|||++++|++.+++||.++||++++++++.+|+|||++|||++++++ ++
T Consensus 270 l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~TGa~iis~~~~l~~~e~ 349 (559)
T 3p9d_A 270 LEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKEDLRRIARATGATLVSSMSNLEGEET 349 (559)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTCEEESSCCHHHHHHHHHHSSCCCBCCSCCSTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCceEccCCHHHHHHHHHHhCCEEEecccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 45
Q ss_pred CCCccccCCCCceeeeeEEEEEecCeeEEEEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCC
Q psy14917 312 MEGEESFEASSLGEAAEVVQTQVCDDELILINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGG 391 (407)
Q Consensus 312 l~~~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG 391 (407)
+++++ ||+|+.|+++++|+++|++|++|+++++|||+|||+|+.+++|.||+++||++++|+++++|++|||||
T Consensus 350 ~~~~~------LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGG 423 (559)
T 3p9d_A 350 FESSY------LGLCDEVVQAKFSDDECILIKGTSKHSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGG 423 (559)
T ss_dssp CCTTT------SCCEEEEEEEECSSCEEECEEEESSSCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTT
T ss_pred CCHhH------CccceEEEEEEEcCceEEEEEcCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCcc
Confidence 55555 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc
Q psy14917 392 AVEAALSIYLENFAT 406 (407)
Q Consensus 392 ~~E~~la~~l~~~a~ 406 (407)
|+|++||.+|+++++
T Consensus 424 a~e~~~s~~L~~~~~ 438 (559)
T 3p9d_A 424 CVEAALNIYLDNFAT 438 (559)
T ss_dssp THHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999975
No 13
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.1e-91 Score=711.10 Aligned_cols=394 Identities=28% Similarity=0.496 Sum_probs=379.1
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
+||++|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|+++++++|++++||||||+++|+++||+
T Consensus 17 ~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GDGTTtvvvLa~~Ll~ 96 (517)
T 3iyg_Z 17 SAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLK 96 (517)
T ss_pred HHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCCceeHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhccc
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIKIT 160 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~~~ 160 (407)
++.+++++|+||+.|++||+.|++.++++|+++ +++++. +++.|.++|+|+++||+.+.+.++|++++++|+..+.+.
T Consensus 97 ~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~-~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~ 174 (517)
T 3iyg_Z 97 QADLYISEGLHPRIITEGFEAAKEKALQFLEQV-KVSKEM-DRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQ 174 (517)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhh-CcCCCC-CHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccC
Confidence 999999999999999999999999999999999 988864 889999999999999999999999999999999998764
Q ss_pred ccCCCccccCCceEEEEcCCCCCCCceeEeeEEEecccccccccccccCceEEEEeecccccccccCeEEEecCHHHHHH
Q psy14917 161 EKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKLDG 240 (407)
Q Consensus 161 ~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~~~ 240 (407)
. ..+|+++|+|++++||+..||++++|++|++++.+++||++++||||++++++|++++++.++++.+++++++++
T Consensus 175 ~----~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~m~~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~ 250 (517)
T 3iyg_Z 175 D----EPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREK 250 (517)
T ss_pred C----CcCChhHheeeeecCCCccccceEeeEEEeccCCCCCccccccCCeEEEecccccccccccceeEEeCCHHHHHH
Confidence 2 247888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCc---------EEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCC
Q psy14917 241 IRARESDITKERINKILATGAN---------VILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSN 311 (407)
Q Consensus 241 ~~~~E~~~l~~~v~~i~~~~~~---------lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~ 311 (407)
+.++|++++++.+++|...+++ |||++++|++.+++||.++||++++++++++|+|||++|||++++++++
T Consensus 251 ~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~leria~~tGa~iv~~l~~ 330 (517)
T 3iyg_Z 251 LVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMERLTLACGGIALNSLDD 330 (517)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHHHHHHHhCCEEecchhh
Confidence 9999999999999999999887 5999999999999999999999999999999999999999999999988
Q ss_pred CCCccccCCCCceeeeeEEEEEecCeeEEEEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCC
Q psy14917 312 MEGEESFEASSLGEAAEVVQTQVCDDELILINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGG 391 (407)
Q Consensus 312 l~~~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG 391 (407)
+++++ ++|+|+ |++.++|+++|+||++|++++.|||+|||+|+++++|.||+++||++++|+++++|++|||||
T Consensus 331 l~~~~-----~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGG 404 (517)
T 3iyg_Z 331 LNPDC-----LLGHAG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAG 404 (517)
T ss_pred Ccccc-----cCCcce-EEEEEEcCceEEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCcc
Confidence 77653 299999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc
Q psy14917 392 AVEAALSIYLENFAT 406 (407)
Q Consensus 392 ~~E~~la~~l~~~a~ 406 (407)
|+|++||++|+++++
T Consensus 405 a~e~~~s~~L~~~~~ 419 (517)
T 3iyg_Z 405 AVEVAMAEALVKYKP 419 (517)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999985
No 14
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=5.2e-92 Score=717.22 Aligned_cols=396 Identities=32% Similarity=0.522 Sum_probs=383.5
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
+||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++||+++||+
T Consensus 26 ~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ 105 (528)
T 3p9d_D 26 IAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLG 105 (528)
T ss_dssp HHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHHHHHHHHHHTCSCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHH
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhccc
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIKIT 160 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~~~ 160 (407)
++.+++++|+||+.|++||+.|++.++++|+++ +++++..+++.|.++|+|+++||++++|+++|++|+++|+.++++.
T Consensus 106 ~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~ 184 (528)
T 3p9d_D 106 AAERLLNKGIHPTIIADSFQSAAKRSVDILLEM-CHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDE 184 (528)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHh-hCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999 9999877899999999999999999999999999999999999864
Q ss_pred ccCCCccccCCceEEEEcCCCCCCCceeEeeEEEeccccccc-ccccccCceEEEEeecccccccccCeEEEecCHHHHH
Q psy14917 161 EKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQA-MKKKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKLD 239 (407)
Q Consensus 161 ~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~-~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~~ 239 (407)
. ++ .+|+++|+|++++|+++.||++++|++|++++.+++ ||+.++||||++++++|++++++.++++.++++++++
T Consensus 185 ~-~~--~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~ 261 (528)
T 3p9d_D 185 N-SK--NVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMD 261 (528)
T ss_dssp T-TT--CCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHH
T ss_pred c-CC--ccceEEEEEEEecCCCccceEEEeeeEEeecccCcccCcccccCceEEEEeccccccccccCceEEeCCHHHHH
Confidence 2 23 478889999999999999999999999999999998 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCcEEEeCCCC-----CHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCC
Q psy14917 240 GIRARESDITKERINKILATGANVILVSGGI-----DDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEG 314 (407)
Q Consensus 240 ~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I-----~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~ 314 (407)
.+.++|++++++++++|.+.|++|||++++| ++.+++||.++||++++++++++|+|||++|||+++++++++++
T Consensus 262 ~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~~~~l~~ 341 (528)
T 3p9d_D 262 KILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDIEREEIEFLSKGLGCKPIADIELFTE 341 (528)
T ss_dssp HHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECCCTHHHHHHHHHHTCCCCSCSTTCCS
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeCCHHHHHHHHHHHCCEEecccccCCH
Confidence 9999999999999999999999999999999 99999999999999999999999999999999999999999888
Q ss_pred ccccCCCCceeeeeEEEEEecCeeEEEEECCC--C-CCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCC
Q psy14917 315 EESFEASSLGEAAEVVQTQVCDDELILINGPK--A-RTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGG 391 (407)
Q Consensus 315 ~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~--~-~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG 391 (407)
++ +|+|+.|++.++|+++|++|++|+ + +++|||+|||+|+.+++|.||+++||++++|+++++|++|||||
T Consensus 342 ~~------LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGG 415 (528)
T 3p9d_D 342 DR------LDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGG 415 (528)
T ss_dssp SS------EEEESCEECCEETTEECCBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTT
T ss_pred HH------CCcccEEEEEEECCEEEEEEEcccccCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCC
Confidence 87 999999999999999999999998 6 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc
Q psy14917 392 AVEAALSIYLENFAT 406 (407)
Q Consensus 392 ~~E~~la~~l~~~a~ 406 (407)
++|++||.+|+++++
T Consensus 416 a~e~~~s~~L~~~~~ 430 (528)
T 3p9d_D 416 APEIEISRRLSKEAR 430 (528)
T ss_dssp HHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999875
No 15
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=6.6e-91 Score=714.06 Aligned_cols=396 Identities=26% Similarity=0.455 Sum_probs=377.0
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
+||..|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++||+++||+
T Consensus 33 ~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll~ 112 (568)
T 3p9d_H 33 AAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPAVKVLVMATEQQKIDMGDGTNLVMILAGELLN 112 (568)
T ss_dssp HHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHhhhceeCCCceehHHHHHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccC--CCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhc
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISV--DELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIK 158 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~--~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~ 158 (407)
++.+++++|+||+.|++||+.|++.++++|+++ ++++ +..+++.|.++|+|+++||+.+++ ++|++|+++|+.++.
T Consensus 113 ~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~-a~~v~~~~~~~~~l~~va~tsl~sK~~~~~-~~i~~livdAv~~V~ 190 (568)
T 3p9d_H 113 VSEKLISMGLSAVEIIQGYNMARKFTLKELDEM-VVGEITDKNDKNELLKMIKPVISSKKYGSE-DILSELVSEAVSHVL 190 (568)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHH-CCSCCCCCCTTHHHHHHHHHHHTTTSTTCH-HHHHHHHHHHHTTSC
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-ccccCCCCCCHHHHHHHHHHHhhccCcchH-HHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999 8765 556889999999999999999988 999999999999998
Q ss_pred cccc--CCCccccCCceEEEEcCCCCCCCceeEeeEEEeccccccccccccc---CceEEEEeecccccccccCeEEEec
Q psy14917 159 ITEK--SGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAMKKKIT---NAKIACLDFSLQKAKMKLGVEVLVN 233 (407)
Q Consensus 159 ~~~~--~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~---~~kI~l~~~~L~~~~~~~~~~~~i~ 233 (407)
++.. .+...+|+++|+|++++|++++||++++|++|++++. .||++++ ||||++++++|++++++.++++.++
T Consensus 191 ~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~~--~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~ 268 (568)
T 3p9d_H 191 PVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREPE--GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLH 268 (568)
T ss_dssp C---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCBS--SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECC
T ss_pred hccccccCCcccccceEEEEEccCCCcchheeeccEEEeeccc--CCcEEEecCCcceEEEEccCccccccccCceEEeC
Confidence 7411 1112478889999999999999999999999999985 6899999 9999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCC
Q psy14917 234 DPEKLDGIRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNME 313 (407)
Q Consensus 234 ~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~ 313 (407)
++++++++.++|++++++++++|++.|++|||++++|++.+++||.++||++++++++.+|+|||++|||++++++++++
T Consensus 269 ~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI~av~~v~~~~leria~~tGa~ivs~l~~l~ 348 (568)
T 3p9d_H 269 NAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGILVLKVPSKFELRRLCRVCGATPLPRLGAPT 348 (568)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHTCEEECCCCHHHHHHHHHHHSCCCCSSSSCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCCeEEEecCCHHHHHHHHHHhCCEEEeccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCceeeeeEEEEEecCeeEEEEECCC--CCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhc--CCeEEeC
Q psy14917 314 GEESFEASSLGEAAEVVQTQVCDDELILINGPK--ARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLE--SKNLVAG 389 (407)
Q Consensus 314 ~~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~--~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~--~~~~vpG 389 (407)
+++ ||+|+.|+++++|+++|++|++|+ ++++|||+|||+|+++++|.||+++||++++|++++ ++++|||
T Consensus 349 ~~~------LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpG 422 (568)
T 3p9d_H 349 PEE------LGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPG 422 (568)
T ss_dssp GGG------CEECSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCT
T ss_pred HHH------CCcceEEEEEEecCceEEEEecCCCCCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeC
Confidence 887 999999999999999999999998 789999999999999999999999999999999999 9999999
Q ss_pred CCHHHHHHHHHHHhhhc
Q psy14917 390 GGAVEAALSIYLENFAT 406 (407)
Q Consensus 390 GG~~E~~la~~l~~~a~ 406 (407)
|||+|++||++|+++|+
T Consensus 423 GGa~E~~ls~~L~~~a~ 439 (568)
T 3p9d_H 423 AGATEIELISRITKYGE 439 (568)
T ss_dssp TTHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhc
Confidence 99999999999999975
No 16
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=9.5e-91 Score=712.08 Aligned_cols=396 Identities=32% Similarity=0.527 Sum_probs=378.8
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
+||..|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++||+++||+
T Consensus 52 ~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~ 131 (562)
T 3p9d_E 52 LAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQLSKSQDDEIGDGTTGVVVLASALLD 131 (562)
T ss_dssp HHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHHHHHHHHHHHHHHHHTSSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHHHHHHHHHHHHHHhhcCCCcccHHHHHHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCC----HHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHH
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELG----KECLINAAKTSMSSKLIGPDDNFFATMVVDAAQA 156 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~----~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~ 156 (407)
++.+++++|+||+.|++||+.|++.++++|+++ +++++..+ ++.|.++|+|+++||+++.|.++|++++++|+..
T Consensus 132 ~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~ 210 (562)
T 3p9d_E 132 QALELIQKGIHPIKIANGFDEAAKLAISKLEET-CDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVIN 210 (562)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTT-TSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-ccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhee
Confidence 999999999999999999999999999999999 98876432 3789999999999999999999999999999999
Q ss_pred hcccccCCCccccCCceEEEEcCCCCCCCceeEeeEEEecccccccccccc------cCceEEEEeecccccccccCeEE
Q psy14917 157 IKITEKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAMKKKI------TNAKIACLDFSLQKAKMKLGVEV 230 (407)
Q Consensus 157 v~~~~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~------~~~kI~l~~~~L~~~~~~~~~~~ 230 (407)
+.+... ..+|+++|+|++++||++.||++++|++|++++.+++||+.. +++||+++++||++.+++.++++
T Consensus 211 V~~~~~---~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~m~~~~~~~~~~~~~kIall~~~le~~k~~~~~~~ 287 (562)
T 3p9d_E 211 VMDKDR---KDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQMPKCVLPKEGSDGVKLAILTCPFEPPKPKTKHKL 287 (562)
T ss_dssp SSTTTC---SCCCCCCCEEEEESSSCGGGCEEESSEEESSCCCTTSCCC-----TTCSSCEECEEESCCSSCCCSSCCCC
T ss_pred eccccc---CCCCcccEEEEEecCCChhhhceeeeEEEecCCCCCCcCcccccccccccceEEEecccccccccccCceE
Confidence 876432 147888999999999999999999999999999999999998 99999999999999999999999
Q ss_pred EecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccC
Q psy14917 231 LVNDPEKLDGIRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLS 310 (407)
Q Consensus 231 ~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~ 310 (407)
.++++++++.+.++|++++++++++|++.|++|||++++|++.+++||.++||++++++++++|+|||++|||+++++++
T Consensus 288 ~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~~v~~v~k~~le~ia~~TGa~iis~l~ 367 (562)
T 3p9d_E 288 DISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAVRWVGGQELEHIAISTNGRIVPRFQ 367 (562)
T ss_dssp CCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCCCEECCCTTTHHHHHHHHCCCEEESSS
T ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCceeeeeEEEEEecC--eeEEEEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEe
Q psy14917 311 NMEGEESFEASSLGEAAEVVQTQVCD--DELILINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVA 388 (407)
Q Consensus 311 ~l~~~~~~~~~~lG~~~~v~~~~~g~--~~~~~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vp 388 (407)
++++++ ||+|+.|+++++|+ ++|++|++|++++.|||+|||+|+++++|.||+++||++++|+++++|++||
T Consensus 368 ~l~~~~------LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVp 441 (562)
T 3p9d_E 368 DLSKDK------LGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVY 441 (562)
T ss_dssp CCCTTS------CEECSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEE
T ss_pred cCCHHH------CCcceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 999887 99999999999995 8999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhhc
Q psy14917 389 GGGAVEAALSIYLENFAT 406 (407)
Q Consensus 389 GGG~~E~~la~~l~~~a~ 406 (407)
||||+|++||++|+++++
T Consensus 442 GGGa~e~~~s~~L~~~~~ 459 (562)
T 3p9d_E 442 GGGAAEVTMSLAVSEEAD 459 (562)
T ss_dssp TTTHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhc
Confidence 999999999999999875
No 17
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1.4e-91 Score=716.57 Aligned_cols=393 Identities=35% Similarity=0.531 Sum_probs=378.6
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
+||..|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||||||++|||++||+
T Consensus 31 ~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ 110 (550)
T 3p9d_G 31 NACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMK 110 (550)
T ss_dssp HHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhhhhCCCceehHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCC---HHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHh
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELG---KECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAI 157 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~---~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v 157 (407)
++.+++++|+||+.|++||+.|++.++++|+++ +++++..+ ++.|.++|+|+++||+++.|+++|++++++|+.++
T Consensus 111 ~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V 189 (550)
T 3p9d_G 111 EAKPFLEEGISSHLIMKGYRKAVSLAVEKINEL-AVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSL 189 (550)
T ss_dssp TTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHS-EECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999 99887555 88999999999999999999999999999999999
Q ss_pred cccccCCCccccCCceEEEEcCCCCCCCceeEeeEEEecccccc---cccccccCceEEEEeecccccccccCeEEEecC
Q psy14917 158 KITEKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQ---AMKKKITNAKIACLDFSLQKAKMKLGVEVLVND 234 (407)
Q Consensus 158 ~~~~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~---~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~ 234 (407)
++. ++|+++|+|++++|++++||++++|++|++++.++ .||++++||||++++++|++++++.++++.+++
T Consensus 190 ~~~------~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en~kIll~~~~Le~~k~e~~~~v~is~ 263 (550)
T 3p9d_G 190 DRN------DLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSLNVELELKAEKDNAEVRVEH 263 (550)
T ss_dssp CSS------SCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSSCCEEEECSCCSCCCCSSCEEEEECS
T ss_pred Ccc------ccCchheeEEEecCCCccceeEEeeEEEeccccccccccCcccccCceEEEeccccccccccccceeeeCC
Confidence 741 37788999999999999999999999999999887 689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCC
Q psy14917 235 PEKLDGIRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEG 314 (407)
Q Consensus 235 ~~~~~~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~ 314 (407)
+++++++.++|++++++++++|++.|++||+++++|++.+++||+++||++++++++++|+|||++|||+++++++++++
T Consensus 264 ~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v~k~~lerIa~~tGa~iis~l~~l~~ 343 (550)
T 3p9d_G 264 VEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKP 343 (550)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECCCTTHHHHHHHHTCCCCBSSGGGCCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCcCHHHHHHHHHHhCCceecchhhCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccCCCCceeeeeEEEEEecCeeEEEEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHH
Q psy14917 315 EESFEASSLGEAAEVVQTQVCDDELILINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVE 394 (407)
Q Consensus 315 ~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E 394 (407)
++ +|+|+.|++.++|+++|++|++|+++++|||+|||+|+++++|.||+++||++++|+++++|++||||||+|
T Consensus 344 ~~------LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e 417 (550)
T 3p9d_G 344 EH------LGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATE 417 (550)
T ss_dssp GG------CCCCSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHH
T ss_pred HH------cCCceEEEEEEeCCeEEEEEecCCCCceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHH
Confidence 87 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhc
Q psy14917 395 AALSIYLENFAT 406 (407)
Q Consensus 395 ~~la~~l~~~a~ 406 (407)
+++|++|+++++
T Consensus 418 ~~~s~~L~~~~~ 429 (550)
T 3p9d_G 418 MEVSKCLRDYSK 429 (550)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999999875
No 18
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.8e-89 Score=694.24 Aligned_cols=392 Identities=30% Similarity=0.491 Sum_probs=376.4
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
+||..|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++||+++||+
T Consensus 18 ~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~ 97 (512)
T 3iyg_Q 18 QACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLE 97 (512)
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhhhCCChhHHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccc--cCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhc
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQQLTI--SVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIK 158 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~--~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~ 158 (407)
++.+++++|+||+.|++||+.|++.++++|+++ ++ +.+..+++.|.++|+|+++||+.+ ++++|++++++|+.+++
T Consensus 98 ~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~-~~~~~~~~~~~~~l~~va~tsl~sK~~~-~~~~i~~livdAv~~V~ 175 (512)
T 3iyg_Q 98 LAEELLRLGLSVSEVIEGYEIACKKAHEILPDL-VCCSAKNLRDVDEVSSLLHTSVMSKQYG-NEVFLAKLIAQACVSIF 175 (512)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-hcccCCCCCCHHHHHHHHHHHhCCCCcc-chHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999998 65 556678999999999999999875 68999999999999998
Q ss_pred ccccCCCccccCCceEEEEcCCCCCCCceeEeeEEEecccccccccccccCceEEEEeecccccccccCeEEEecCHHHH
Q psy14917 159 ITEKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKL 238 (407)
Q Consensus 159 ~~~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~ 238 (407)
++. + .+++++|+|.+.+||++.||++++|++|++++.+ ||++.+|+||+++++||++.+++.++++.+++++++
T Consensus 176 ~~~--~--~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l 249 (512)
T 3iyg_Q 176 PDS--G--HFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEG--DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEEL 249 (512)
T ss_pred ccC--C--cccHhHeeEeeccCCCcccceEEeeEEEecCcCC--CCcccccCceEEEecccccccccccceEEeCCHHHH
Confidence 642 2 4778899999999999999999999999999875 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCCcccc
Q psy14917 239 DGIRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEGEESF 318 (407)
Q Consensus 239 ~~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~~~ 318 (407)
.++.++|++++++++++|++.|++||+++++|++.+++||+++||++++++++.+|+|||++|||+++++++++++++
T Consensus 250 ~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~tGa~iis~l~~~~~~~-- 327 (512)
T 3iyg_Q 250 MNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPRLNPPVLEE-- 327 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCCEEecccccCCHHH--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCceeeeeEEEEEecCeeEEEEECCC-CCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHHHHH
Q psy14917 319 EASSLGEAAEVVQTQVCDDELILINGPK-ARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVEAAL 397 (407)
Q Consensus 319 ~~~~lG~~~~v~~~~~g~~~~~~~~~~~-~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E~~l 397 (407)
||+|+.|++.++|+++|++|++|+ .+++|||+|||+|+++++|.||+++||++++|+++++|++||||||+|+++
T Consensus 328 ----LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~ 403 (512)
T 3iyg_Q 328 ----MGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIEL 403 (512)
T ss_pred ----CCcccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHH
Confidence 999999999999999999999997 478999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhc
Q psy14917 398 SIYLENFAT 406 (407)
Q Consensus 398 a~~l~~~a~ 406 (407)
|++|+++++
T Consensus 404 s~~L~~~~~ 412 (512)
T 3iyg_Q 404 AKQITSYGE 412 (512)
T ss_pred HHHHHHHhc
Confidence 999999875
No 19
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.3e-90 Score=710.86 Aligned_cols=399 Identities=30% Similarity=0.486 Sum_probs=375.6
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
.||..|+++||+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++||+++||+
T Consensus 26 ~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~ 105 (590)
T 3p9d_C 26 TAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILA 105 (590)
T ss_dssp HHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHHHHTHHHHTTTHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHHHHHHHHHHHhhhhhhCCCccchHHHHHHHHh
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-HHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhcc
Q psy14917 81 NADEL-VKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIKI 159 (407)
Q Consensus 81 ~~~~l-i~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~~ 159 (407)
++.++ +++|+||+.|++||+.|++.++++|+++ +++++..+++.|.++|+|+++||+.++|+++|++|+++|+..+++
T Consensus 106 ~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~ 184 (590)
T 3p9d_C 106 QCAPYLIEKNIHPVIIIQALKKALTDALEVIKQV-SKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRK 184 (590)
T ss_dssp HHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHH-CCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTT
T ss_pred hhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHH-hhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcc
Confidence 99999 9999999999999999999999999999 999987778999999999999999999999999999999999987
Q ss_pred cccCC-----CccccCC-ceEEEEcCCCCCCCceeEeeEEEecccccccccccccCceEEEEeecccccccccCeEEEec
Q psy14917 160 TEKSG-----NVTYPIK-AINLLKAHGKSARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMKLGVEVLVN 233 (407)
Q Consensus 160 ~~~~~-----~~~~~~~-~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~ 233 (407)
+...+ +..+|++ +|+|++++||++.||++++|++|++++.++.||++++||||++++++|++++++.++++.++
T Consensus 185 ~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is 264 (590)
T 3p9d_C 185 DLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHIENPRVVLLDCPLEYKKGESQTNIEIE 264 (590)
T ss_dssp CC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTTSCSCEESCCEECCCCCCSCCCCTTTEECCBC
T ss_pred cccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCCCCcceeeeeEEEEEcccccccccccCceEEeC
Confidence 53211 1135543 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCC
Q psy14917 234 DPEKLDGIRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNME 313 (407)
Q Consensus 234 ~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~ 313 (407)
++++++++.+.|++++++++++|++.|++|||++++|++.+++||.++||++++++++.+|+|||++|||++++++++++
T Consensus 265 ~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I~av~~~~k~~le~ia~~TGa~iis~l~~~~ 344 (590)
T 3p9d_C 265 KEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLK 344 (590)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTCCCCCCCCHHHHHHHHHHHTCCCCSCSTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccceeeccCCHHHHHHHHHHhCCceeecccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCcee-eeeEEEEEecCeeEEEEECCCCCCe------------------------------------------
Q psy14917 314 GEESFEASSLGE-AAEVVQTQVCDDELILINGPKARTA------------------------------------------ 350 (407)
Q Consensus 314 ~~~~~~~~~lG~-~~~v~~~~~g~~~~~~~~~~~~~~~------------------------------------------ 350 (407)
+++ ||+ |+.|++.++|+++|++|++|+++..
T Consensus 345 ~~~------LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~ 418 (590)
T 3p9d_C 345 ESD------VGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGS 418 (590)
T ss_dssp TTS------CBCCCSEEECCEETTEECEEECC------------------------------------------------
T ss_pred HHH------hCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccC
Confidence 887 999 9999999999999999999988777
Q ss_pred --------------EEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHHHHHHHHHHhhhc
Q psy14917 351 --------------ASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVEAALSIYLENFAT 406 (407)
Q Consensus 351 --------------~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E~~la~~l~~~a~ 406 (407)
|||+|||+|+.+++|.||+++||++++|+++++|++||||||+|+++|.+|+++++
T Consensus 419 ~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~ 488 (590)
T 3p9d_C 419 GHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAK 488 (590)
T ss_dssp ---------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999874
No 20
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.2e-90 Score=710.49 Aligned_cols=394 Identities=25% Similarity=0.466 Sum_probs=377.7
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLK 80 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~ 80 (407)
+||++|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++||+++||+
T Consensus 24 ~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~e~GDGTTtvvVLA~eLL~ 103 (546)
T 3p9d_F 24 TSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAAAQDEITGDGTTTVVCLVGELLR 103 (546)
T ss_dssp HHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCC--CCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhc
Q psy14917 81 NADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDE--LGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIK 158 (407)
Q Consensus 81 ~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~--~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~ 158 (407)
++.+++++|+||+.|++||+.|++.++++|+++ +++++. .+++.|.++|+|+++||+.+.|.++|++++++|+..+.
T Consensus 104 ~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~ 182 (546)
T 3p9d_F 104 QAHRFIQEGVHPRIITDGFEIARKESMKFLDEF-KISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVY 182 (546)
T ss_dssp HHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHH-CCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTH
T ss_pred HHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHh-hccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEee
Confidence 999999999999999999999999999999999 988754 57899999999999999998999999999999999997
Q ss_pred ccccCCCccccCCceEEEEcCCCCCCCceeEeeEEEecccccccccccccCceEEEEeecccccccccCeEEEecCHHHH
Q psy14917 159 ITEKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKL 238 (407)
Q Consensus 159 ~~~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~ 238 (407)
+... . .+|+++|++++++||+..||++++|++|++++.++.||++++||||++++|+|++++++.++++.+++++++
T Consensus 183 ~~~~-~--~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~ 259 (546)
T 3p9d_F 183 DAQA-D--NLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQR 259 (546)
T ss_dssp HHHH-T--TCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSSSCSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCH
T ss_pred cCCC-C--cccchheEEEEecCCCccccEEEeeEEEecccccccCcceecCceEEEecCcccccccccCceEEEcCHHHH
Confidence 5432 1 478889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC----------CcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccc
Q psy14917 239 DGIRARESDITKERINKILATG----------ANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTS 308 (407)
Q Consensus 239 ~~~~~~E~~~l~~~v~~i~~~~----------~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~ 308 (407)
+.+.++|++++++.+++|...+ ++|||++++|++.+++||.++||++++++++++|+|||++|||+++++
T Consensus 260 ~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~vr~v~~~~leria~~tGa~ii~~ 339 (546)
T 3p9d_F 260 DKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILALRRAKRRNMERLQLVTGGEAQNS 339 (546)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCEEECCCCHHHHHHHHHTTTBCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCeeEecCCHHHHHHHHHHhCCEEecc
Confidence 9999999999999999999864 349999999999999999999999999999999999999999999999
Q ss_pred cCCCCCccccCCCCceeeeeEEEEEecCeeEEEEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEe
Q psy14917 309 LSNMEGEESFEASSLGEAAEVVQTQVCDDELILINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVA 388 (407)
Q Consensus 309 ~~~l~~~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vp 388 (407)
++++++++ +|+|+.|+++++|+++|+||++|++++.|||+|||+|+++++|.||+++||++++|+++++|++||
T Consensus 340 l~~l~~~~------LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVp 413 (546)
T 3p9d_F 340 VEDLSPQI------LGFSGLVYQETIGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIP 413 (546)
T ss_dssp CSSCSTTC------CBCCCCBCBCCCSSCCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEE
T ss_pred hhhCCHhH------CCcccEEEEEEecCceEEEEecCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEe
Confidence 99999887 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhh
Q psy14917 389 GGGAVEAALSIYLENF 404 (407)
Q Consensus 389 GGG~~E~~la~~l~~~ 404 (407)
||||+|+++|++|+++
T Consensus 414 GGGa~e~~~s~~L~~~ 429 (546)
T 3p9d_F 414 GAGAFYIALSRYLRSA 429 (546)
T ss_dssp TTTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhh
Confidence 9999999999999983
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=7.3e-89 Score=695.15 Aligned_cols=391 Identities=34% Similarity=0.534 Sum_probs=374.3
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEc-CCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVD-DIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELL 79 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~-~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll 79 (407)
+||..|+++|||||||+||+|||++ +.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++|||++||
T Consensus 24 ~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e~a~~qd~~~GDGTTtavVLA~~Ll 103 (527)
T 3p9d_B 24 VGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELL 103 (527)
T ss_dssp HHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHHHHHHHHHHTCSCTTTTTHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHHHHHHhHhhhCCcHhHHHHHHHHHH
Confidence 3789999999999999999999999 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHc-CCChHHHHHHHHHHHHHHHHHHHhhccccCCCCC---HHHHHHHHHhhccCCCCCCchHHHHHHHHHHHH
Q psy14917 80 KNADELVKQ-KIHPTSVISGYRLACKEACKYIQQQLTISVDELG---KECLINAAKTSMSSKLIGPDDNFFATMVVDAAQ 155 (407)
Q Consensus 80 ~~~~~li~~-gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~---~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~ 155 (407)
+++.+++++ |+||+.|++||+.|++.++++|+++ +++++..+ ++.|.++|+|+++||+.++|+++|++|+++|+.
T Consensus 104 ~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~ 182 (527)
T 3p9d_B 104 REAEKLIDQSKIHPQTIIEGYRLASAAALDALTKA-AVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAIL 182 (527)
T ss_dssp HHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHT-CBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh-CccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999999999 98885322 789999999999999999999999999999999
Q ss_pred HhcccccCCCccccCCceEEEEcCCCCCCCceeEeeEEEecccccccccccccCceEEEEeecccccccc-cCeEEEecC
Q psy14917 156 AIKITEKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMK-LGVEVLVND 234 (407)
Q Consensus 156 ~v~~~~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~-~~~~~~i~~ 234 (407)
+++++. |++.|+|+++.||++.||++++|++|++++.+++ |++++||||++++++|++++++ ++.++.+++
T Consensus 183 ~V~~~~-------~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~-p~~~~n~kIlll~~~le~~k~~~~~~~v~i~~ 254 (527)
T 3p9d_B 183 RLKGST-------NLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQ-PKRIENAKILIANTTLDTDKVKIFGTKFKVDS 254 (527)
T ss_dssp TTCTTC-------CTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSC-CSCCSSCEEEEECSCSSCCCCSSCCCBCCCCH
T ss_pred HhcccC-------CcceEEEEEcCCCCccccEEEEeEEEecccCCCC-CeeeecceEEEeccccccccccccCceEEEcC
Confidence 998642 4668999999999999999999999999999886 8899999999999999999999 689999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCC
Q psy14917 235 PEKLDGIRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEG 314 (407)
Q Consensus 235 ~~~~~~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~ 314 (407)
++++..+.++|++++++++++|.+.|++||+++++|++.+++||.++||++++++++.+|+|+|++|||+++++++++++
T Consensus 255 ~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~dle~ia~~tGa~iv~~~~~~~~ 334 (527)
T 3p9d_B 255 TAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERLALVTGGEVVSTFDEPSK 334 (527)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHHHHHHHHHHTCCCCCSTTSCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCEEecchhhCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccccCCCCceeeeeEEEEEecCeeEEEEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHH
Q psy14917 315 EESFEASSLGEAAEVVQTQVCDDELILINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVE 394 (407)
Q Consensus 315 ~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E 394 (407)
++ +|+|+.|+++.+|+++|++|++|+++++|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|
T Consensus 335 ~~------LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e 408 (527)
T 3p9d_B 335 CK------LGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAE 408 (527)
T ss_dssp SC------EECSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHH
T ss_pred HH------CCCCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHH
Confidence 87 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhc
Q psy14917 395 AALSIYLENFAT 406 (407)
Q Consensus 395 ~~la~~l~~~a~ 406 (407)
+++|.+|+++++
T Consensus 409 ~~~s~~L~~~~~ 420 (527)
T 3p9d_B 409 MVMSKAVDTEAQ 420 (527)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999874
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=6.3e-86 Score=668.95 Aligned_cols=377 Identities=33% Similarity=0.564 Sum_probs=298.9
Q ss_pred EEEcCCCCeEEecCHHHHHhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Q psy14917 22 MLVDDIGDVTVTNDGATILRLLEVEHPAARVLVELAQLQDEEVGDGTTSVVIVAAELLKNADELVKQKIHPTSVISGYRL 101 (407)
Q Consensus 22 ~i~~~~g~~~iTndg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt~~vlL~~~ll~~~~~li~~gi~p~~I~~~~~~ 101 (407)
||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||+++|+++||+++.+++++|+||+.|++||+.
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~ 80 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRH 80 (500)
T ss_dssp ------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHhcccccCCCcccc-CCceEEEEcCC
Q psy14917 102 ACKEACKYIQQQLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQAIKITEKSGNVTYP-IKAINLLKAHG 180 (407)
Q Consensus 102 a~~~~~~~l~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~v~~~~~~~~~~~~-~~~I~i~~~~G 180 (407)
|++.++++|+++ +++++..+++.|.++|+|+++||+.++|+++|++++++|+.+++++. +|...+| +++|+|++++|
T Consensus 81 A~~~a~~~L~~~-s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~-~g~~~~di~~~I~V~k~~G 158 (500)
T 3aq1_B 81 AAEKCREILETI-TIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEE-EDGLKVNVLENIKIEKRAG 158 (500)
T ss_dssp HHHHHHHHHHHH-CEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECC-SSSCEECHHHHEEEEEEES
T ss_pred HHHHHHHHHHHh-cCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccc-cCCccccccccEEEEEecC
Confidence 999999999999 99987678999999999999999999999999999999999998642 1333477 78999999999
Q ss_pred CCCCCceeEeeEEEecccccccccccccCceEEEEeecccccccccCeEEEecCHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy14917 181 KSARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKLDGIRARESDITKERINKILATG 260 (407)
Q Consensus 181 ~~~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~ 260 (407)
+++.||++++|++|++++.+++||++++||||++++++|++++++.++++.++++++++.+.++|++++++++++|.+.|
T Consensus 159 ~~~~ds~lv~G~v~dk~~~~~~m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g 238 (500)
T 3aq1_B 159 GSIDDSELIDGLVIDKERSHPNMPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASG 238 (500)
T ss_dssp SCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTC
T ss_pred CCccceEEEeeeEEeecCCCCCCcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCCccccCCCCceeeeeEEEEEecCeeEE
Q psy14917 261 ANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEGEESFEASSLGEAAEVVQTQVCDDELI 340 (407)
Q Consensus 261 ~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~~g~~~~~ 340 (407)
++|||++++|++.+++||.++||++++++++++|+|||++|||+++++++++++++ ||+|+.|+++++|+++|+
T Consensus 239 ~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~------LG~a~~v~~~~ig~~~~~ 312 (500)
T 3aq1_B 239 ANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTED------VGTAGLVEEKEVRGGKMT 312 (500)
T ss_dssp CSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTT------CEEEEEEEEEECSSSEEE
T ss_pred cCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhH------CCCceEEEEEEecCeEEE
Confidence 99999999999999999999999999999999999999999999999999999987 999999999999999999
Q ss_pred EEECCCCCCeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHHHHHHHHHHhhhc
Q psy14917 341 LINGPKARTAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVEAALSIYLENFAT 406 (407)
Q Consensus 341 ~~~~~~~~~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E~~la~~l~~~a~ 406 (407)
+|++|+++++|||+|||+|+++++|.||+++||++++|+++++|++|||||++|+++|.+|+++++
T Consensus 313 ~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~ 378 (500)
T 3aq1_B 313 YVTGCQNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYAS 378 (500)
T ss_dssp EEEEETTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHH
T ss_pred EEECCCCCceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999875
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=4.3e-74 Score=585.41 Aligned_cols=350 Identities=25% Similarity=0.367 Sum_probs=322.4
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccCh----HHHHHHHHHHhhhhhcCCChhHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHP----AARVLVELAQLQDEEVGDGTTSVVIVAA 76 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP----~a~ll~~~~~~~~~~~GDGtt~~vlL~~ 76 (407)
.||..|+++|||||||+||+|||+++.|+++|||||+||+++|+++|| +|+|+++++++|++++||||||+++|++
T Consensus 17 ~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~ 96 (543)
T 1we3_A 17 RGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDVAGDGTTTATVLAQ 96 (543)
T ss_dssp HHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhheecCCCcchHHHHHH
Confidence 378999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHH
Q psy14917 77 ELLKNADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQA 156 (407)
Q Consensus 77 ~ll~~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~ 156 (407)
+||+++.+++++|+||+.|++||+.|++.++++|+++ +++++ +++.|.++++++++ ++++++++++|+.+
T Consensus 97 ~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~--~~~~l~~vA~iS~~-------~~~i~~li~dAv~~ 166 (543)
T 1we3_A 97 AIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKAL-AIPVE--DRKAIEEVATISAN-------DPEVGKLIADAMEK 166 (543)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHT-CBCCC--SHHHHHHHHHHHHT-------CHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cccCC--CHHHHHHhhhhhcC-------CHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 99884 78999999998874 68999999999999
Q ss_pred hcccccCCCccccCCceEEEEcCCCCCCCc-eeEeeEEEeccccccc-------ccccccCceEEEEeecccccccccCe
Q psy14917 157 IKITEKSGNVTYPIKAINLLKAHGKSARES-VLVQGYALNCTVASQA-------MKKKITNAKIACLDFSLQKAKMKLGV 228 (407)
Q Consensus 157 v~~~~~~~~~~~~~~~I~i~~~~G~~~~dS-~li~G~v~~~~~~~~~-------~~~~~~~~kI~l~~~~L~~~~~~~~~ 228 (407)
++++ + .|+|+ +|++++|| ++++|++|++++.+++ |+..++||||++++++
T Consensus 167 V~~~---g-------~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~---------- 224 (543)
T 1we3_A 167 VGKE---G-------IITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKK---------- 224 (543)
T ss_dssp TCTT---S-------EEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSC----------
T ss_pred hCcC---C-------cEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCC----------
Confidence 9753 2 36666 89999999 9999999999999886 4556999999999996
Q ss_pred EEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcC------ceEEE-----ecChHHHHHH
Q psy14917 229 EVLVNDPEKLDGIRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAG------AMAVR-----RVKKVDLKRI 297 (407)
Q Consensus 229 ~~~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~------I~~i~-----~v~~~~l~~i 297 (407)
+++.++ +.++++++.+.|+++||++++|++.+++||..++ |.+++ ++++++|+||
T Consensus 225 ---Is~~~~-----------l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~i 290 (543)
T 1we3_A 225 ---VSNVRE-----------LLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDI 290 (543)
T ss_dssp ---BCCHHH-----------HHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHH
T ss_pred ---cCCHHH-----------HHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHH
Confidence 445555 4578999999999999999999999999999964 56666 8999999999
Q ss_pred HHHhCCeeccc-----cCCCCCccccCCCCceeeeeEEEEEecCeeEEEEECCCCC------------------------
Q psy14917 298 AKATGASFLTS-----LSNMEGEESFEASSLGEAAEVVQTQVCDDELILINGPKAR------------------------ 348 (407)
Q Consensus 298 a~~tGa~ii~~-----~~~l~~~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~------------------------ 348 (407)
|++|||+++++ ++++++++ ||+|+.|++ +.+++++|++|+++
T Consensus 291 a~~tGa~ii~~~~g~~l~~~~~~~------LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e 361 (543)
T 1we3_A 291 AAVTGGTVISEELGFKLENATLSM------LGRAERVRI---TKDETTIVGGKGKKEDIEARINGIKKELETTDSEYARE 361 (543)
T ss_dssp HHHHCCCCBCTTTTCCGGGCCGGG------CEEEEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHH
T ss_pred HHHhCCceeeccccCCcccCCHHH------CCCceEEEE---EcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHH
Confidence 99999999996 78888877 999999976 56899999999864
Q ss_pred -----------CeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHHHHHHHHHHhhhc
Q psy14917 349 -----------TAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVEAALSIYLENFAT 406 (407)
Q Consensus 349 -----------~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E~~la~~l~~~a~ 406 (407)
++|||+|||+|+.+++|.||+++||++++|+++++| +|||||++|++++.+|++++.
T Consensus 362 ~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~ 429 (543)
T 1we3_A 362 KLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIK 429 (543)
T ss_dssp HHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccC-cCCCccHHHHHHHHHHHHHhh
Confidence 789999999999999999999999999999999999 999999999999999999875
No 24
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=3.3e-74 Score=585.40 Aligned_cols=350 Identities=21% Similarity=0.352 Sum_probs=323.3
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccCh----HHHHHHHHHHhhhhhcCCChhHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHP----AARVLVELAQLQDEEVGDGTTSVVIVAA 76 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP----~a~ll~~~~~~~~~~~GDGtt~~vlL~~ 76 (407)
.||..|+++|||||||+||+|||+++.|+++|||||+||+++|+++|| .|+|+++++++|++++||||||++||++
T Consensus 17 ~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~ 96 (547)
T 1kp8_A 17 RGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQ 96 (547)
T ss_dssp HHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccccCCCcchhHHHHH
Confidence 378999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHH
Q psy14917 77 ELLKNADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQA 156 (407)
Q Consensus 77 ~ll~~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~ 156 (407)
+||+++.+++++|+||+.|++||+.|++.++++|+++ +++++ +++.|.++++++++ +++++++++++|+.+
T Consensus 97 ~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~--~~e~l~~vA~iS~~------~~~~i~~liadAv~~ 167 (547)
T 1kp8_A 97 AIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKAL-SVPCS--DSKAIAQVGTISAN------SDETVGKLIAEAMDK 167 (547)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH-CBCCC--SHHHHHHHHHHHTT------SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-CcCCC--CHHHHHHHHHHhcc------chhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 99884 78999999999875 489999999999999
Q ss_pred hcccccCCCccccCCceEEEEcCCCCCCCc-eeEeeEEEeccccccc-------ccccccCceEEEEeecccccccccCe
Q psy14917 157 IKITEKSGNVTYPIKAINLLKAHGKSARES-VLVQGYALNCTVASQA-------MKKKITNAKIACLDFSLQKAKMKLGV 228 (407)
Q Consensus 157 v~~~~~~~~~~~~~~~I~i~~~~G~~~~dS-~li~G~v~~~~~~~~~-------~~~~~~~~kI~l~~~~L~~~~~~~~~ 228 (407)
++++ + .|+|+ +|+++++| ++++|++|++++.+++ |++.++||||++++++
T Consensus 168 V~~d---g-------~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~---------- 225 (547)
T 1kp8_A 168 VGKE---G-------VITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKK---------- 225 (547)
T ss_dssp HCTT---S-------EEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESE----------
T ss_pred hCcC---C-------cEEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCc----------
Confidence 9853 2 36776 89999999 9999999999999876 5566999999999996
Q ss_pred EEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCc------eEEE-----ecChHHHHHH
Q psy14917 229 EVLVNDPEKLDGIRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGA------MAVR-----RVKKVDLKRI 297 (407)
Q Consensus 229 ~~~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I------~~i~-----~v~~~~l~~i 297 (407)
++++++ +.++++++.+.|+++||++++|++.+++||..++| ++++ ++++++|+||
T Consensus 226 ---Is~~~~-----------l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~i 291 (547)
T 1kp8_A 226 ---ISNIRE-----------MLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDI 291 (547)
T ss_dssp ---ECCGGG-----------THHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHH
T ss_pred ---CCCHHH-----------HHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHH
Confidence 445666 45788999999999999999999999999999754 5555 9999999999
Q ss_pred HHHhCCeeccc-----cCCCCCccccCCCCceeeeeEEEEEecCeeEEEEECCCCC------------------------
Q psy14917 298 AKATGASFLTS-----LSNMEGEESFEASSLGEAAEVVQTQVCDDELILINGPKAR------------------------ 348 (407)
Q Consensus 298 a~~tGa~ii~~-----~~~l~~~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~------------------------ 348 (407)
|++|||+++++ ++++++++ ||+|+.|++ +.+++++|++|+++
T Consensus 292 a~~tG~~ii~~~~g~~l~~~~~~~------LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e 362 (547)
T 1kp8_A 292 ATLTGGTVISEEIGMELEKATLED------LGQAKRVVI---NKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDRE 362 (547)
T ss_dssp HHHHTCCCEEGGGTCCSTTCCTTT------SEEEEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHH
T ss_pred HHHhCCeEecccccCCcccCCHHH------CCceeEEEE---ccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHH
Confidence 99999999996 88888877 999999976 56899999999864
Q ss_pred -----------CeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHHHHHHHHHHhhh
Q psy14917 349 -----------TAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVEAALSIYLENFA 405 (407)
Q Consensus 349 -----------~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E~~la~~l~~~a 405 (407)
++|||+|||+|+.+++|.||+++||++++|+++++| +|||||++|++++.+|++++
T Consensus 363 kl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~ 429 (547)
T 1kp8_A 363 KLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG-VVAGGGVALIRVASKLADLR 429 (547)
T ss_dssp HHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHTTTCC
T ss_pred HHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCC-EEeCCcHHHHHHHHHHHHHh
Confidence 789999999999999999999999999999999999 99999999999999999876
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.3e-74 Score=588.87 Aligned_cols=350 Identities=21% Similarity=0.349 Sum_probs=292.9
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccCh----HHHHHHHHHHhhhhhcCCChhHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHP----AARVLVELAQLQDEEVGDGTTSVVIVAA 76 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP----~a~ll~~~~~~~~~~~GDGtt~~vlL~~ 76 (407)
.||..|+++|||||||+||+|||+++.|+++|||||+||+++|+++|| +|+|+++++++|++++||||||++||++
T Consensus 18 ~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~ 97 (545)
T 1iok_A 18 KGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQ 97 (545)
T ss_dssp HHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGGGCSTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhccccCCCcchHHHHHH
Confidence 378999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHH
Q psy14917 77 ELLKNADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQA 156 (407)
Q Consensus 77 ~ll~~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~ 156 (407)
+||+++.+++++|+||+.|++||+.|++.++++|+++ +++++ +++.|.++++++++ +++++++++++|+.+
T Consensus 98 ~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~--~~e~l~~va~iS~~------~~~~i~~li~dAv~~ 168 (545)
T 1iok_A 98 AIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSA-ARPVN--DSSEVAQVGTISAN------GESFIGQQIAEAMQR 168 (545)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CBCCC--STTTTTHHHHHTTT------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cccCC--CHHHHHHHHHhhcC------CchhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 98884 67889999998875 488999999999999
Q ss_pred hcccccCCCccccCCceEEEEcCCCCCCCc-eeEeeEEEeccccccc-------ccccccCceEEEEeecccccccccCe
Q psy14917 157 IKITEKSGNVTYPIKAINLLKAHGKSARES-VLVQGYALNCTVASQA-------MKKKITNAKIACLDFSLQKAKMKLGV 228 (407)
Q Consensus 157 v~~~~~~~~~~~~~~~I~i~~~~G~~~~dS-~li~G~v~~~~~~~~~-------~~~~~~~~kI~l~~~~L~~~~~~~~~ 228 (407)
++++ + .|+|+ +|+++++| ++++|++|++++.+++ |++.++||||++++++++
T Consensus 169 V~~~---g-------~I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~-------- 228 (545)
T 1iok_A 169 VGNE---G-------VITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLS-------- 228 (545)
T ss_dssp HCTT---S-------CCCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBC--------
T ss_pred hccC---C-------eEEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcC--------
Confidence 9853 2 25555 79999999 9999999999999876 555699999999999854
Q ss_pred EEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCc------eEEE-----ecChHHHHHH
Q psy14917 229 EVLVNDPEKLDGIRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGA------MAVR-----RVKKVDLKRI 297 (407)
Q Consensus 229 ~~~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I------~~i~-----~v~~~~l~~i 297 (407)
++++ +.++++++.+.|+++||++++|++.+++||..++| .+++ ++++++|+||
T Consensus 229 -----~~~~-----------l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~i 292 (545)
T 1iok_A 229 -----SLQP-----------MVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDI 292 (545)
T ss_dssp -----CCCC----------------------CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHH
T ss_pred -----CHHH-----------HHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHH
Confidence 4455 45778899999999999999999999999999754 5555 9999999999
Q ss_pred HHHhCCeeccc-----cCCCCCccccCCCCceeeeeEEEEEecCeeEEEEECCCCC------------------------
Q psy14917 298 AKATGASFLTS-----LSNMEGEESFEASSLGEAAEVVQTQVCDDELILINGPKAR------------------------ 348 (407)
Q Consensus 298 a~~tGa~ii~~-----~~~l~~~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~------------------------ 348 (407)
|++|||+++++ ++++++++ ||+|+.|++ +.++|++|++|+++
T Consensus 293 a~~tGa~ii~~~~~~~l~~~~~~~------LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e 363 (545)
T 1iok_A 293 AILTGGQVISEDLGMKLENVTIDM------LGRAKKVSI---NKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDRE 363 (545)
T ss_dssp HHHHTC---------------CTT------SEEEEEEEE---CSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHH
T ss_pred HHhcCCeeecccccCCcccCCHHH------cCcCcEEEE---ecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHH
Confidence 99999999997 88888877 999999986 56899999999864
Q ss_pred -----------CeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHHHHHHHHHHhhh
Q psy14917 349 -----------TAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVEAALSIYLENFA 405 (407)
Q Consensus 349 -----------~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E~~la~~l~~~a 405 (407)
++|||+|||+|+.+++|.||+++||++++|+++++| +|||||++|++++.+|++++
T Consensus 364 kl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~ 430 (545)
T 1iok_A 364 KLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLS 430 (545)
T ss_dssp HHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCC
T ss_pred HHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHh
Confidence 789999999999999999999999999999999999 99999999999999999876
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=4.8e-73 Score=575.39 Aligned_cols=350 Identities=24% Similarity=0.354 Sum_probs=267.4
Q ss_pred ChHHHHHHHhhhcCCCCCCceEEEcCCCCeEEecCHHHHHhhccccChH----HHHHHHHHHhhhhhcCCChhHHHHHHH
Q psy14917 1 MAASAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPA----ARVLVELAQLQDEEVGDGTTSVVIVAA 76 (407)
Q Consensus 1 ~a~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTndg~tIl~~l~~~hP~----a~ll~~~~~~~~~~~GDGtt~~vlL~~ 76 (407)
.||..|+++|||||||+||+|||+++.|+++|||||+||+++|+++||+ |+|+++++++|++++||||||++||++
T Consensus 17 ~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~e~GDGTTtvvVLAg 96 (546)
T 3rtk_A 17 RGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQ 96 (546)
T ss_dssp --------------------------------------------CCCHHHHHHHHHHHHHHTSCC-------CHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhhhhCCCcchHHHHHH
Confidence 4789999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHH
Q psy14917 77 ELLKNADELVKQKIHPTSVISGYRLACKEACKYIQQQLTISVDELGKECLINAAKTSMSSKLIGPDDNFFATMVVDAAQA 156 (407)
Q Consensus 77 ~ll~~~~~li~~gi~p~~I~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~v~a~~~ 156 (407)
+||+++.+++++|+||+.|++||+.|++.++++|+++ +++++ +++.|.++|+++++ ++.+++++++|+.+
T Consensus 97 eLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~-s~~v~--~~e~L~~vA~iS~~-------~~~i~~liadAv~~ 166 (546)
T 3rtk_A 97 ALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKG-AKEVE--TKEQIAATAAISAG-------DQSIGDLIAEAMDK 166 (546)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHT-CBCCC--SHHHHHHHHHHHHT-------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cccCC--ChHHHHhHeEEeCC-------chHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 99885 78999999998875 57899999999999
Q ss_pred hcccccCCCccccCCceEEEEcCCCCCCCceeEeeEEEeccccccc-------ccccccCceEEEEeecccccccccCeE
Q psy14917 157 IKITEKSGNVTYPIKAINLLKAHGKSARESVLVQGYALNCTVASQA-------MKKKITNAKIACLDFSLQKAKMKLGVE 229 (407)
Q Consensus 157 v~~~~~~~~~~~~~~~I~i~~~~G~~~~dS~li~G~v~~~~~~~~~-------~~~~~~~~kI~l~~~~L~~~~~~~~~~ 229 (407)
++++ + .|+|++.. +...||++++|++|++++.+|+ |++.++||||++++++
T Consensus 167 V~~d---g-------vI~Ve~~~-~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~k----------- 224 (546)
T 3rtk_A 167 VGNE---G-------VITVEESN-TFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSK----------- 224 (546)
T ss_dssp SCTT---S-------EEEEECCS-SSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSE-----------
T ss_pred hccC---C-------ceEEEecC-CcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCc-----------
Confidence 9753 2 47777644 4457899999999999999884 5778999999999986
Q ss_pred EEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcC------ceEEE-----ecChHHHHHHH
Q psy14917 230 VLVNDPEKLDGIRARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAG------AMAVR-----RVKKVDLKRIA 298 (407)
Q Consensus 230 ~~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~------I~~i~-----~v~~~~l~~ia 298 (407)
++++++ +.++++++.+.|++|||++++|++.+++||..++ +.+++ +.++++|+|||
T Consensus 225 --Is~~~~-----------l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia 291 (546)
T 3rtk_A 225 --VSTVKD-----------LLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMA 291 (546)
T ss_dssp --ECCSTT-----------THHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHH
T ss_pred --cCCHHH-----------HHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHH
Confidence 455666 4567899999999999999999999999999764 34443 45689999999
Q ss_pred HHhCCeecc-----ccCCCCCccccCCCCceeeeeEEEEEecCeeEEEEECCCCC-------------------------
Q psy14917 299 KATGASFLT-----SLSNMEGEESFEASSLGEAAEVVQTQVCDDELILINGPKAR------------------------- 348 (407)
Q Consensus 299 ~~tGa~ii~-----~~~~l~~~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~------------------------- 348 (407)
++|||++++ +++++++++ ||+|+.|+ ++++++++|++|+++
T Consensus 292 ~~tG~~ii~~~~~~~l~~~~~~~------LG~a~~v~---i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ek 362 (546)
T 3rtk_A 292 ILTGGQVISEEVGLTLENADLSL------LGKARKVV---VTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREK 362 (546)
T ss_dssp HHHTCCCBCSSSSCCSTTCCTTT------SEEEEEEE---ECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHH
T ss_pred HHhCCEEeeccccCccccCCHhh------CCeeEEEE---EcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHH
Confidence 999999999 577877776 99999997 488899999999864
Q ss_pred ----------CeEEEEEeCCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeCCCHHHHHHHHHHHhhh
Q psy14917 349 ----------TAASIILRGPNDFYCDEMERSIHDALCVVKRVLESKNLVAGGGAVEAALSIYLENFA 405 (407)
Q Consensus 349 ----------~~~TIllrg~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGG~~E~~la~~l~~~a 405 (407)
.+|||+|||+|+.+++|.||+++||++++|+++++| +|||||++|+++|.+|++++
T Consensus 363 l~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~g-iVpGGGa~e~~~s~~L~~~~ 428 (546)
T 3rtk_A 363 LQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDELK 428 (546)
T ss_dssp HHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHTTGGGSTTSC
T ss_pred HHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-cccCCcHHHHHHHHHHHHhc
Confidence 389999999999999999999999999999999999 99999999999999998874
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=1.3e-42 Score=304.82 Aligned_cols=173 Identities=27% Similarity=0.439 Sum_probs=151.4
Q ss_pred CCCceeEeeEEEecccccccccccccCceEEEEeecccccccccCeEEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Q psy14917 183 ARESVLVQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKLDGIRARESDITKERINKILATGAN 262 (407)
Q Consensus 183 ~~dS~li~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~ 262 (407)
++||++++|++|++++.+++||++++||||++++++|++++++.++++.++++++++.+.++|++++++++++|++.|+|
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~n 80 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPD 80 (178)
T ss_dssp --CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred CCCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCCccccCCCCcee-eeeEEEEEecCeeEEE
Q psy14917 263 VILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEGEESFEASSLGE-AAEVVQTQVCDDELIL 341 (407)
Q Consensus 263 lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~~~~~~~lG~-~~~v~~~~~g~~~~~~ 341 (407)
||+++++|+|.+++||.++||++++|+++++|+|||++|||+++++++++++++ +|+ |+.|++.++|+++|++
T Consensus 81 VVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~------LG~~~~~v~~~~ig~~~~~~ 154 (178)
T 1gml_A 81 VVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDD------VGTGAGLLEIKKIGDEYFTF 154 (178)
T ss_dssp EEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGG------SBCCEEEEEEEEETTEEEEE
T ss_pred EEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhh------hCCcccEEEEEEECCeEEEE
Confidence 999999999999999999999999999999999999999999999999999988 999 9999999999999999
Q ss_pred EECCCCCCeEEEEEeCCChh
Q psy14917 342 INGPKARTAASIILRGPNDF 361 (407)
Q Consensus 342 ~~~~~~~~~~TIllrg~~~~ 361 (407)
|++|+++++|||+|||++.+
T Consensus 155 ~~gc~~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 155 ITDCKDPKACTILLRGASHH 174 (178)
T ss_dssp EEEESSTTSCEEEEEC----
T ss_pred EECCCCCCEEEEEEECCCcc
Confidence 99999999999999999975
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=100.00 E-value=1.2e-36 Score=261.59 Aligned_cols=154 Identities=35% Similarity=0.566 Sum_probs=149.5
Q ss_pred EeeEEEecccccccccccccCceEEEEeecccccccccCeEEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCC
Q psy14917 189 VQGYALNCTVASQAMKKKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKLDGIRARESDITKERINKILATGANVILVSG 268 (407)
Q Consensus 189 i~G~v~~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lVi~~~ 268 (407)
++|++|++++.+++||++++||||++++|+|++++++.++++.++++++++.+.++|++++++++++|++.|+|||+|++
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k 80 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQK 80 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESS
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeeccccCCCCCccccCCCCceeeeeEEEEEecCeeEEEEECCCCC
Q psy14917 269 GIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFLTSLSNMEGEESFEASSLGEAAEVVQTQVCDDELILINGPKAR 348 (407)
Q Consensus 269 ~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~ 348 (407)
+|++.+++||.++||++++|+++++|+|||++|||+++++++++++++ +|+|+.|++.++|+++|++|++|++.
T Consensus 81 ~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~------LG~~~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 81 GIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSV------LGEAETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp CBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTS------CEEEEEEEEEEETTEEEEEEESCC--
T ss_pred ccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCccc------CccceEEEEEEECCeEEEEEECCCCc
Confidence 999999999999999999999999999999999999999999999988 99999999999999999999999874
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.09 E-value=3.8e-10 Score=96.97 Aligned_cols=149 Identities=17% Similarity=0.209 Sum_probs=107.1
Q ss_pred ceeEeeEEEeccccccccc-------ccccCceEEEEeecccccccccCeEEEecCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14917 186 SVLVQGYALNCTVASQAMK-------KKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKLDGIRARESDITKERINKILA 258 (407)
Q Consensus 186 S~li~G~v~~~~~~~~~~~-------~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~E~~~l~~~v~~i~~ 258 (407)
-++++|+-|++++.+|+|. -.++||.|++.+.. +++..+ +.++++++.+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkK-------------Is~i~~-----------ilP~LE~~~~ 57 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDK-------------ISSLPD-----------LLPLLEKVAG 57 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSE-------------ECCHHH-----------HHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCc-------------cCCHHH-----------HHHHHHHHHH
Confidence 3578999999999998754 35779999998875 667777 6788889999
Q ss_pred cCCcEEEeCCCCCHHHHHHHHHcC------ceEE-----EecChHHHHHHHHHhCCeeccccCCCCCccccCCCCceeee
Q psy14917 259 TGANVILVSGGIDDLCLKYFVEAG------AMAV-----RRVKKVDLKRIAKATGASFLTSLSNMEGEESFEASSLGEAA 327 (407)
Q Consensus 259 ~~~~lVi~~~~I~~~al~~l~~~~------I~~i-----~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~~~~~~~lG~~~ 327 (407)
.+.+++|.+.+|+..|+..|.-|+ +.++ +.-++..|++||.+|||.+++.--.++-+ +....+||+|+
T Consensus 58 ~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le-~~~~~~LG~a~ 136 (194)
T 3m6c_A 58 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLR-EVGLEVLGSAR 136 (194)
T ss_dssp HTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGG-GCCGGGCEEEE
T ss_pred hCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccc-cCCHHHCCCcc
Confidence 999999999999999999888763 3334 34558899999999999999863222211 22233499999
Q ss_pred eEEEEEecCeeEEEEECCCCCCeEEEEEeC-CChhhHHHHHHHHHHHHH
Q psy14917 328 EVVQTQVCDDELILINGPKARTAASIILRG-PNDFYCDEMERSIHDALC 375 (407)
Q Consensus 328 ~v~~~~~g~~~~~~~~~~~~~~~~TIllrg-~~~~~l~e~~r~i~dal~ 375 (407)
++.+. +--|.++.| +++..+++.-+.++..+.
T Consensus 137 ~v~vt----------------kd~T~iv~G~g~~~~I~~Rv~qIr~~ie 169 (194)
T 3m6c_A 137 RVVVS----------------KDDTVIVDGGGTAEAVANRAKHLRAEID 169 (194)
T ss_dssp EEEEC----------------SSCEEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred EEEEc----------------CCceEEecCCCCHHHHHHHHHHHHHHHH
Confidence 98651 223444544 556666665555555443
No 30
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.02 E-value=1.7e-09 Score=93.09 Aligned_cols=145 Identities=16% Similarity=0.215 Sum_probs=105.0
Q ss_pred eeEEEeccccccccc-------ccccCceEEEEeecccccccccCeEEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Q psy14917 190 QGYALNCTVASQAMK-------KKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKLDGIRARESDITKERINKILATGAN 262 (407)
Q Consensus 190 ~G~v~~~~~~~~~~~-------~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~ 262 (407)
+|+-|++++.+|+|. -.++||.|++.+.. |++..+ +.++++++.+.+.+
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkK-------------Is~i~~-----------ilP~LE~v~~~~rp 68 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDKK-------------ISNIRE-----------LLPVLEGVAKASKP 68 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEE-------------ECCHHH-----------HHHHHHHHHTSSCC
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcCc-------------cCCHHH-----------HHHHHHHHHHhCCC
Confidence 589999999998764 35789999999976 667777 67889999999999
Q ss_pred EEEeCCCCCHHHHHHHHHcC------ceEEE-----ecChHHHHHHHHHhCCeeccccCCCCCccccCCCCceeeeeEEE
Q psy14917 263 VILVSGGIDDLCLKYFVEAG------AMAVR-----RVKKVDLKRIAKATGASFLTSLSNMEGEESFEASSLGEAAEVVQ 331 (407)
Q Consensus 263 lVi~~~~I~~~al~~l~~~~------I~~i~-----~v~~~~l~~ia~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~ 331 (407)
++|.+.+|+.+|+..|.-|+ +.+++ .-++..|++||.+|||.+++.--.++-+ +....+||+|++|.+
T Consensus 69 LlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le-~~~~~~LG~a~~V~v 147 (201)
T 3osx_A 69 LVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELE-KATLEDLGQAKRVVI 147 (201)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGG-GCCGGGCEEEEEEEE
T ss_pred eEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccc-cCCHhhCCCccEEEE
Confidence 99999999999999888763 33443 4457889999999999999863222221 223334999999865
Q ss_pred EEecCeeEEEEECCCCCCeEEEEEeC-CChhhHHHHHHHHHHHHH
Q psy14917 332 TQVCDDELILINGPKARTAASIILRG-PNDFYCDEMERSIHDALC 375 (407)
Q Consensus 332 ~~~g~~~~~~~~~~~~~~~~TIllrg-~~~~~l~e~~r~i~dal~ 375 (407)
. +--|.++.| +++..+++.-..++..+.
T Consensus 148 t----------------kd~TtIv~G~G~~~~I~~Rv~qIr~qie 176 (201)
T 3osx_A 148 N----------------KDTTTIIDGVGEEGAIAARVTQIRQQIE 176 (201)
T ss_dssp C----------------SSCEEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred c----------------CCceEEecCCCCHHHHHHHHHHHHHHHH
Confidence 1 223445544 566666666555555443
No 31
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=98.93 E-value=1.6e-09 Score=88.80 Aligned_cols=116 Identities=22% Similarity=0.262 Sum_probs=90.5
Q ss_pred eEEEeccccccccc-------ccccCceEEEEeecccccccccCeEEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcE
Q psy14917 191 GYALNCTVASQAMK-------KKITNAKIACLDFSLQKAKMKLGVEVLVNDPEKLDGIRARESDITKERINKILATGANV 263 (407)
Q Consensus 191 G~v~~~~~~~~~~~-------~~~~~~kI~l~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~l 263 (407)
|+-|++++.+|+|. -.++||.|++.+.. +++.++ +.++++++.+.+.++
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkK-------------Is~i~~-----------llP~LE~v~~~~~pL 56 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKK-------------VSNVRE-----------LLPILEQVAQTGKPL 56 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSE-------------ECCHHH-----------HHHHHHHHHTTTCCE
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEeccc-------------ccCHHH-----------HHHHHHHHHHHCCCE
Confidence 78899999988764 34679999999875 667777 678889999999999
Q ss_pred EEeCCCCCHHHHHHHHHcC------ceEE-----EecChHHHHHHHHHhCCeeccccCCCCCccccCCCCceeeeeEEE
Q psy14917 264 ILVSGGIDDLCLKYFVEAG------AMAV-----RRVKKVDLKRIAKATGASFLTSLSNMEGEESFEASSLGEAAEVVQ 331 (407)
Q Consensus 264 Vi~~~~I~~~al~~l~~~~------I~~i-----~~v~~~~l~~ia~~tGa~ii~~~~~l~~~~~~~~~~lG~~~~v~~ 331 (407)
+|.+.+|+.+|+..|.-|+ +.++ +.-++..|++||.+||+++++.--.++-+ +....+||+|+++.+
T Consensus 57 lIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le-~~~~~~LG~a~~v~v 134 (145)
T 1srv_A 57 LIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLE-NATLSMLGRAERVRI 134 (145)
T ss_dssp EEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGG-GCCGGGCEEEEEEEE
T ss_pred EEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccc-cCCHhHCCccCEEEE
Confidence 9999999999999998763 3334 35568899999999999999863222222 233344999999876
No 32
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=82.39 E-value=3 Score=33.67 Aligned_cols=53 Identities=15% Similarity=0.227 Sum_probs=41.9
Q ss_pred HHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCe
Q psy14917 251 ERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGAS 304 (407)
Q Consensus 251 ~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ 304 (407)
...+.|.+.++++|||. +|.+.+.+.|.++||.++.......-+.|.+...+.
T Consensus 67 ~~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp CHHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 34566777899999995 799999999999999999877665556666665554
No 33
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=82.20 E-value=4.9 Score=31.62 Aligned_cols=52 Identities=13% Similarity=0.110 Sum_probs=41.4
Q ss_pred HHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCe
Q psy14917 252 RINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGAS 304 (407)
Q Consensus 252 ~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ 304 (407)
..+.|.+.|+++|+|. +|.+.+.+.|.++||.++.......-+.|.....+.
T Consensus 57 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 57 TAQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 4556678899999995 599999999999999999976665556666666554
No 34
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=81.52 E-value=3.6 Score=32.26 Aligned_cols=53 Identities=26% Similarity=0.298 Sum_probs=42.1
Q ss_pred HHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCe
Q psy14917 251 ERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGAS 304 (407)
Q Consensus 251 ~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ 304 (407)
...+.|.+.++++|+|. +|.+.+.+.|.++||.++.......-+.|.....+.
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 45666778899999995 699999999999999999876655556666665554
No 35
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=78.09 E-value=4.4 Score=31.68 Aligned_cols=53 Identities=11% Similarity=0.160 Sum_probs=40.8
Q ss_pred HHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecCh-HHHHHHHHHhCCe
Q psy14917 251 ERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKK-VDLKRIAKATGAS 304 (407)
Q Consensus 251 ~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~-~~l~~ia~~tGa~ 304 (407)
...+.|.+.++++|+|. +|.+.+.+.|.++||.++..... ..-+.|.....+.
T Consensus 58 ~~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g~ 111 (120)
T 2wfb_A 58 NAAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDGQ 111 (120)
T ss_dssp HHHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcCC
Confidence 34566777899999995 69999999999999999987665 4455555555443
No 36
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=73.54 E-value=5.4 Score=30.91 Aligned_cols=52 Identities=12% Similarity=0.173 Sum_probs=40.9
Q ss_pred HHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCe
Q psy14917 252 RINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGAS 304 (407)
Q Consensus 252 ~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ 304 (407)
..+.|.+.++++|+|. +|.+.+.+.|.++||.++.......-+.|.....+.
T Consensus 54 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 54 VVQSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 3455667899999995 599999999999999999876665556666665554
No 37
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=72.77 E-value=7.5 Score=31.24 Aligned_cols=52 Identities=10% Similarity=0.052 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCe
Q psy14917 251 ERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGAS 304 (407)
Q Consensus 251 ~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ 304 (407)
...+.|.+.++++||| ++|.+.+.+.|.+ ||.++.-.....-+.+.....+.
T Consensus 70 ~~~~~L~~~gv~~VI~-g~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G~ 121 (136)
T 2re2_A 70 FMLKSALDHGANALVL-SEIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEGK 121 (136)
T ss_dssp HHHHHHHHTTCSEEEE-SCCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEE-CCCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhCC
Confidence 4456677789999999 5699999999999 99999986644445555555444
No 38
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=63.32 E-value=17 Score=27.35 Aligned_cols=49 Identities=16% Similarity=0.095 Sum_probs=38.4
Q ss_pred HHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCe
Q psy14917 254 NKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGAS 304 (407)
Q Consensus 254 ~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ 304 (407)
+.+.+.++++|+| +++.+.+.+.|.++ |.++.....+.-+.+.....+.
T Consensus 50 ~~l~~~gv~~vi~-~~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~g~ 98 (105)
T 2qtd_A 50 KSIVKENVNAIIC-KNISEENYKKFSKK-IEIYHAEGDDVDKNISLFIEGE 98 (105)
T ss_dssp HHHHHTCCSEEEE-SCCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHTTC
T ss_pred HHHHHCCCCEEEE-CCCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHcCC
Confidence 4556689999999 57999999999999 9999976665556666655443
No 39
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=58.13 E-value=25 Score=25.31 Aligned_cols=48 Identities=10% Similarity=0.119 Sum_probs=36.0
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHHHHH----HHHHcCceEEEecChHHHHHH
Q psy14917 250 KERINKILATGANVILVSGGIDDLCLK----YFVEAGAMAVRRVKKVDLKRI 297 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~al~----~l~~~~I~~i~~v~~~~l~~i 297 (407)
++..+.|.+-.+.+|+...+.++.... ++.+++|+++.--++.+|-+.
T Consensus 17 ~~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~sk~eLG~a 68 (82)
T 3v7e_A 17 KQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKKLGKA 68 (82)
T ss_dssp HHHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHHHHHH
T ss_pred HHHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCHHHHHHH
Confidence 345566666789999999999987554 457789999987777666543
No 40
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=58.08 E-value=29 Score=27.37 Aligned_cols=50 Identities=22% Similarity=0.193 Sum_probs=36.9
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCH-----HHHHHHHHcCceEEEecChHHHHHHHHHhC
Q psy14917 250 KERINKILATGANVILVSGGIDD-----LCLKYFVEAGAMAVRRVKKVDLKRIAKATG 302 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~-----~al~~l~~~~I~~i~~v~~~~l~~ia~~tG 302 (407)
++....|.+-.+.+|+...+.+| ....++.+++|+++.--++.+| .+++|
T Consensus 30 ~~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~~L---G~a~G 84 (126)
T 2xzm_U 30 HEVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPKRASL---GEYLG 84 (126)
T ss_dssp HHHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESCSHHH---HHHHT
T ss_pred HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHHH---HHHHC
Confidence 34556667778999999999975 4567888999999976555554 45555
No 41
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=57.62 E-value=29 Score=27.12 Aligned_cols=50 Identities=16% Similarity=0.118 Sum_probs=38.3
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHH-----HHHHHHHcCceEEEecChHHHHHHHHHhC
Q psy14917 250 KERINKILATGANVILVSGGIDDL-----CLKYFVEAGAMAVRRVKKVDLKRIAKATG 302 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~-----al~~l~~~~I~~i~~v~~~~l~~ia~~tG 302 (407)
++....|.+-.+.+|+.+.++++. ...+|.++||+++..-++.+|-+ ++|
T Consensus 26 ~~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~eLG~---a~g 80 (121)
T 2lbw_A 26 KEVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSKQDLGA---AGA 80 (121)
T ss_dssp HHHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCHHHHHH---HHT
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCHHHHHH---HhC
Confidence 345667777889999999999994 44578889999988777766655 455
No 42
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=57.01 E-value=20 Score=32.92 Aligned_cols=52 Identities=19% Similarity=0.188 Sum_probs=41.0
Q ss_pred HHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecC--------------------------hHHHHHHHHHhCCe
Q psy14917 253 INKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVK--------------------------KVDLKRIAKATGAS 304 (407)
Q Consensus 253 v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~--------------------------~~~l~~ia~~tGa~ 304 (407)
+++|.+++|++||.....++...+.|.+.||.++..-. .+.++.+++++|-.
T Consensus 77 ~E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~~~~~~~~~~~~pt~~~~~~~~~~~~~~~i~~lg~~lg~e 154 (326)
T 3psh_A 77 IESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEKK 154 (326)
T ss_dssp HHHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSCCSCGGGTTCSSCCCTTHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEeccccccccccccccccccccchhhhhHHHHHHHHHHHcCCH
Confidence 47788899999998776677888899999998886321 35788899999864
No 43
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=56.15 E-value=35 Score=25.61 Aligned_cols=52 Identities=13% Similarity=0.078 Sum_probs=38.5
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHHHHH----HHHHcCceEEEecChHHHHHHHHHhCCe
Q psy14917 250 KERINKILATGANVILVSGGIDDLCLK----YFVEAGAMAVRRVKKVDLKRIAKATGAS 304 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~al~----~l~~~~I~~i~~v~~~~l~~ia~~tGa~ 304 (407)
++..+.|.+-.+.+||...+.++.... ++...+|+++..-++.+| ..++|-.
T Consensus 25 ~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s~~eL---G~A~Gk~ 80 (101)
T 3v7q_A 25 DLVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESRAVL---GRSIGKE 80 (101)
T ss_dssp HHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESCHHHH---HHHTTSS
T ss_pred hhhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeeechHHHH---HhhhCcc
Confidence 455666777789999999999986544 567789999988666665 5556654
No 44
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=54.58 E-value=36 Score=25.54 Aligned_cols=52 Identities=10% Similarity=0.023 Sum_probs=38.1
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHHHHH----HHHHcCceEEEecChHHHHHHHHHhCCe
Q psy14917 250 KERINKILATGANVILVSGGIDDLCLK----YFVEAGAMAVRRVKKVDLKRIAKATGAS 304 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~al~----~l~~~~I~~i~~v~~~~l~~ia~~tGa~ 304 (407)
++..+.|.+-.+.+||...+.++.... ++.+++|+++..-++.+| ..++|-.
T Consensus 24 ~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~s~~eL---G~a~Gk~ 79 (101)
T 3on1_A 24 EQVVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVGNRQML---GRAIGKH 79 (101)
T ss_dssp HHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHHH---HHHTTSS
T ss_pred HHHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCHHHH---HHHhCCc
Confidence 455666777789999999999986554 456789999987666665 4556653
No 45
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=52.30 E-value=25 Score=28.14 Aligned_cols=51 Identities=14% Similarity=0.141 Sum_probs=37.7
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHH-----HHHHHHHcCceEEEecChHHHHHHHHHhCC
Q psy14917 250 KERINKILATGANVILVSGGIDDL-----CLKYFVEAGAMAVRRVKKVDLKRIAKATGA 303 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~-----al~~l~~~~I~~i~~v~~~~l~~ia~~tGa 303 (407)
++..+.|.+-.+.+|+...++++. ...+|.+.||+++.--++.+| .+++|-
T Consensus 38 ~~v~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eL---G~a~G~ 93 (134)
T 2ale_A 38 NEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVAL---GRACGV 93 (134)
T ss_dssp HHHHHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESCHHHH---HHHTTC
T ss_pred hHHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECCHHHH---HHHhCC
Confidence 455666777788999999999995 556788899998877666554 455554
No 46
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=50.42 E-value=36 Score=30.41 Aligned_cols=52 Identities=17% Similarity=0.249 Sum_probs=39.4
Q ss_pred HHHHHHcCCcEEEeCCCC-CHHHHHHHHHcCceEEEec---C----hHHHHHHHHHhCCe
Q psy14917 253 INKILATGANVILVSGGI-DDLCLKYFVEAGAMAVRRV---K----KVDLKRIAKATGAS 304 (407)
Q Consensus 253 v~~i~~~~~~lVi~~~~I-~~~al~~l~~~~I~~i~~v---~----~~~l~~ia~~tGa~ 304 (407)
+++|.+++|+|||..... ++...+.|.+.||.++.-- + .+.++.+++++|-.
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~~ 111 (283)
T 2r79_A 52 AEGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGVP 111 (283)
T ss_dssp HHHHHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCCCSSHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecCCCCHHHHHHHHHHHHHHhCCH
Confidence 467888999999997653 5777889999999877531 2 25678888888863
No 47
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=49.56 E-value=56 Score=24.59 Aligned_cols=52 Identities=21% Similarity=0.195 Sum_probs=37.9
Q ss_pred HHHHHHHHHHcCCcEEEeCCCCCHHHHH----HHHHcCceEEE-ecChHHHHHHHHHhCC
Q psy14917 249 TKERINKILATGANVILVSGGIDDLCLK----YFVEAGAMAVR-RVKKVDLKRIAKATGA 303 (407)
Q Consensus 249 l~~~v~~i~~~~~~lVi~~~~I~~~al~----~l~~~~I~~i~-~v~~~~l~~ia~~tGa 303 (407)
.++..+.|.+-.+.+||...+.++.... ++.+++|+++. .-++.+| ..++|-
T Consensus 27 ~~~v~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eL---G~a~Gk 83 (104)
T 4a18_G 27 YKSTIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVEL---GTACGK 83 (104)
T ss_dssp HHHHHHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHH---HHHTTC
T ss_pred HHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecCCHHHH---HHHhCC
Confidence 3556677777889999999999985443 55677999996 6666665 455554
No 48
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=49.35 E-value=34 Score=29.99 Aligned_cols=52 Identities=12% Similarity=0.128 Sum_probs=38.7
Q ss_pred HHHHHHcCCcEEEeCCC-CCHHHHHHHHHcCceEEEec----Ch----HHHHHHHHHhCCe
Q psy14917 253 INKILATGANVILVSGG-IDDLCLKYFVEAGAMAVRRV----KK----VDLKRIAKATGAS 304 (407)
Q Consensus 253 v~~i~~~~~~lVi~~~~-I~~~al~~l~~~~I~~i~~v----~~----~~l~~ia~~tGa~ 304 (407)
+++|.+.+|+|||.... .++...+.|.+.||.++.-- +. +.++.+++++|-.
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~~i~~lg~~~g~~ 112 (256)
T 2r7a_A 52 SEGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQVP 112 (256)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCSCCHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHHhCCH
Confidence 47788899999998754 46778889999999776431 22 2578888888863
No 49
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=49.16 E-value=26 Score=32.61 Aligned_cols=52 Identities=8% Similarity=0.049 Sum_probs=37.1
Q ss_pred HHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecC-----------hHHHHHHHHHhCCe
Q psy14917 253 INKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVK-----------KVDLKRIAKATGAS 304 (407)
Q Consensus 253 v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~-----------~~~l~~ia~~tGa~ 304 (407)
+++|.+++|+|||....-.+...+.+.+.||+++.--. .+.++.+++++|..
T Consensus 89 ~E~Ilal~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~~~~~~~~~~~~~~~i~~lG~~lG~e 151 (346)
T 2etv_A 89 LESLITLQPDVVFITYVDRXTAXDIQEXTGIPVVVLSYGNLGTFEDEDLFRSIELAGXILGRE 151 (346)
T ss_dssp HHHHHHHCCSEEEEESCCHHHHHHHHHHHTSCEEEECCCCTTCSCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHhcCCCCEEEEeCCccchHHHHHHhcCCcEEEEecCccCcccHHHHHHHHHHHHHHcCCH
Confidence 46778889999998765344566778888998775321 35678888888863
No 50
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=48.46 E-value=22 Score=31.33 Aligned_cols=52 Identities=6% Similarity=0.106 Sum_probs=37.8
Q ss_pred HHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEe-c-C----hHHHHHHHHHhCCe
Q psy14917 253 INKILATGANVILVSGGIDDLCLKYFVEAGAMAVRR-V-K----KVDLKRIAKATGAS 304 (407)
Q Consensus 253 v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~-v-~----~~~l~~ia~~tGa~ 304 (407)
+++|.+++||+||.....++...+.|.+.||.++.- . + .+.++.+++++|-.
T Consensus 53 ~E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~~g~~ 110 (260)
T 2q8p_A 53 VEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNRK 110 (260)
T ss_dssp HHHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCSSHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHHhCCh
Confidence 466788899999987766667778899999876542 1 1 24577888888863
No 51
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=47.96 E-value=41 Score=26.17 Aligned_cols=48 Identities=15% Similarity=0.101 Sum_probs=36.1
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHH-----HHHHHHHcCceEEEecChHHHHHH
Q psy14917 250 KERINKILATGANVILVSGGIDDL-----CLKYFVEAGAMAVRRVKKVDLKRI 297 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~-----al~~l~~~~I~~i~~v~~~~l~~i 297 (407)
++..+.|.+-.+.+|+...++++. ...++.+++|+++..-++.+|-+.
T Consensus 35 ~~v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eLG~a 87 (120)
T 1xbi_A 35 NEVTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQDLGKA 87 (120)
T ss_dssp HHHHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHHHTCCEEEESCHHHHHHH
T ss_pred HHHHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHhcCCCEEEeCCHHHHHHH
Confidence 345666777789999999999874 346778889998887777666543
No 52
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=45.42 E-value=40 Score=29.45 Aligned_cols=52 Identities=23% Similarity=0.270 Sum_probs=39.6
Q ss_pred HHHHHHcCCcEEEeCCCCC-HHHHHHHHHcCceEEEec---Ch----HHHHHHHHHhCCe
Q psy14917 253 INKILATGANVILVSGGID-DLCLKYFVEAGAMAVRRV---KK----VDLKRIAKATGAS 304 (407)
Q Consensus 253 v~~i~~~~~~lVi~~~~I~-~~al~~l~~~~I~~i~~v---~~----~~l~~ia~~tGa~ 304 (407)
+++|.+++|++||...... +...+.|.+.||.++.-- +. +.++.+++++|..
T Consensus 52 ~E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~~ 111 (255)
T 3md9_A 52 AEGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPGQTTPESVAMKINAVATALHQT 111 (255)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHHHHHhCCH
Confidence 4778899999999987664 567788999999887532 22 4578889999864
No 53
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=44.65 E-value=31 Score=30.09 Aligned_cols=51 Identities=14% Similarity=0.229 Sum_probs=35.6
Q ss_pred HHHHHHcCCcEEEeC-CCCCHHHHHHHHHcCceEEEec--C----hHHHHHHHHHhCC
Q psy14917 253 INKILATGANVILVS-GGIDDLCLKYFVEAGAMAVRRV--K----KVDLKRIAKATGA 303 (407)
Q Consensus 253 v~~i~~~~~~lVi~~-~~I~~~al~~l~~~~I~~i~~v--~----~~~l~~ia~~tGa 303 (407)
+++|.+++|++||.. ...++...+.|.+.||.++.-- + .+.++.+++++|-
T Consensus 50 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~lg~ 107 (245)
T 1n2z_A 50 LERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQ 107 (245)
T ss_dssp HHHHHHTCCSEEEECTTTSCHHHHHHHHHHTCCEEECCCCSHHHHHHHHHHHGGGCSC
T ss_pred HHHHhccCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHHHhCC
Confidence 467788899999986 3567778888999998877422 1 1345666666664
No 54
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=44.05 E-value=40 Score=26.86 Aligned_cols=51 Identities=20% Similarity=0.201 Sum_probs=37.1
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHHHH-----HHHHHcCceEEEecChHHHHHHHHHhCC
Q psy14917 250 KERINKILATGANVILVSGGIDDLCL-----KYFVEAGAMAVRRVKKVDLKRIAKATGA 303 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~al-----~~l~~~~I~~i~~v~~~~l~~ia~~tGa 303 (407)
++..+.|.+-.+.+|+...+.++.-. .++.+++|+++..-++.+| ..++|-
T Consensus 47 ~~v~kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v~sk~eL---G~a~G~ 102 (135)
T 2aif_A 47 NEATKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFVRSKVAL---GRACGV 102 (135)
T ss_dssp HHHHHHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEESCHHHH---HHHTTC
T ss_pred HHHHHHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEECCHHHH---HHHhCC
Confidence 45566666777899999999988633 5677889999887666555 455554
No 55
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate BIND protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2xuz_A* 2xv1_A* 2phz_A
Probab=43.05 E-value=46 Score=30.25 Aligned_cols=52 Identities=29% Similarity=0.317 Sum_probs=38.2
Q ss_pred HHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecC----hHHHHHHHHHhCCe
Q psy14917 253 INKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVK----KVDLKRIAKATGAS 304 (407)
Q Consensus 253 v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~----~~~l~~ia~~tGa~ 304 (407)
+++|.+++|||||.....++...+.|.+.+..++-... .+.++.+++++|-.
T Consensus 89 ~E~I~~l~PDLIi~~~~~~~~~~~~L~~~gp~v~~~~~~~~~~~~i~~lg~~lg~e 144 (311)
T 2wi8_A 89 IEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGKE 144 (311)
T ss_dssp HHHHHHHCCSEEEEETTSCHHHHHHHHTTSCEEEECCCGGGHHHHHHHHHHHHTCH
T ss_pred HHHHHhCCCCEEEEcCccCHHHHHHHHhhCCEEEeeCCCcCHHHHHHHHHHHhCCH
Confidence 46778889999998776788888889988865554322 24578888888863
No 56
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=42.47 E-value=54 Score=25.42 Aligned_cols=51 Identities=20% Similarity=0.194 Sum_probs=37.4
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHH-----HHHHHHHcCceEEEecChHHHHHHHHHhCC
Q psy14917 250 KERINKILATGANVILVSGGIDDL-----CLKYFVEAGAMAVRRVKKVDLKRIAKATGA 303 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~-----al~~l~~~~I~~i~~v~~~~l~~ia~~tGa 303 (407)
++..+.|.+-.+.+|+.+.+.++. ...++.+++|+++..-++.+|- +++|-
T Consensus 35 ~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk~eLG---~a~G~ 90 (120)
T 1vq8_F 35 NETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLG---HAAGL 90 (120)
T ss_dssp HHHHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHTTCCCEEEESCHHHHH---HHTTC
T ss_pred HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEECCHHHHH---HHhCC
Confidence 455666777789999999999774 3457778899988877776665 44554
No 57
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=41.63 E-value=57 Score=25.46 Aligned_cols=47 Identities=15% Similarity=0.044 Sum_probs=35.0
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHH-----HHHHHHHcCceEEEecChHHHHH
Q psy14917 250 KERINKILATGANVILVSGGIDDL-----CLKYFVEAGAMAVRRVKKVDLKR 296 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~-----al~~l~~~~I~~i~~v~~~~l~~ 296 (407)
++..+.|.+-.+.+|+...+.++. ...++.+++|+++..-++.+|-+
T Consensus 34 ~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v~sk~eLG~ 85 (124)
T 2fc3_A 34 NETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKRLGE 85 (124)
T ss_dssp HHHHHHHHTTCCSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEESCHHHHHH
T ss_pred HHHHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEECCHHHHHH
Confidence 455666667789999999999773 34677888999887777766554
No 58
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=41.16 E-value=62 Score=24.86 Aligned_cols=50 Identities=16% Similarity=0.133 Sum_probs=37.9
Q ss_pred HHHHHHHHHHcCCcEEEeCCCCCHHH----HHHHHHcCceEEEe-cChHHHHHHH
Q psy14917 249 TKERINKILATGANVILVSGGIDDLC----LKYFVEAGAMAVRR-VKKVDLKRIA 298 (407)
Q Consensus 249 l~~~v~~i~~~~~~lVi~~~~I~~~a----l~~l~~~~I~~i~~-v~~~~l~~ia 298 (407)
.++.++.|.+-.+.+||...+.++.. .+++..++|+++.. -++.+|-+.+
T Consensus 31 ~~~t~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~eLG~A~ 85 (112)
T 3iz5_f 31 YKTVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGTAC 85 (112)
T ss_dssp HHHHHHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCTHHHHH
T ss_pred HHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHHHHHHh
Confidence 34566777778899999999999854 45678899999987 6777765443
No 59
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=39.01 E-value=79 Score=23.80 Aligned_cols=51 Identities=14% Similarity=0.172 Sum_probs=37.6
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHHH----HHHHHHcCceEEE-ecChHHHHHHHHHhCC
Q psy14917 250 KERINKILATGANVILVSGGIDDLC----LKYFVEAGAMAVR-RVKKVDLKRIAKATGA 303 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~a----l~~l~~~~I~~i~-~v~~~~l~~ia~~tGa 303 (407)
++..+.|.+-.+.+||...+.++.. .+++..++|+++. .-++.+| ..++|-
T Consensus 28 ~~v~kai~~gkaklVilA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eL---G~A~Gk 83 (105)
T 3u5e_c 28 KSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNEL---GTAVGK 83 (105)
T ss_dssp HHHHHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHH---HHHTTC
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHH---HHHhCC
Confidence 4566777777899999999999865 4566778999995 5566554 556664
No 60
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=38.84 E-value=49 Score=30.43 Aligned_cols=51 Identities=14% Similarity=0.077 Sum_probs=37.6
Q ss_pred HHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecC------hHHHHHHHHHhCCe
Q psy14917 253 INKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVK------KVDLKRIAKATGAS 304 (407)
Q Consensus 253 v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~------~~~l~~ia~~tGa~ 304 (407)
+++|.+++|+|||.... ++...+.|.+.||.++.--. .+.++.+++++|-.
T Consensus 109 ~E~i~al~PDLIi~~~~-~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~lg~e 165 (335)
T 4hn9_A 109 TEACVAATPDVVFLPMK-LKKTADTLESLGIKAVVVNPEDQSLLEECITLVGKITNNA 165 (335)
T ss_dssp HHHHHHTCCSEEEEEGG-GHHHHHHHHHTTCCEEEECCCSHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhcCCCEEEEeCc-chhHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHHcCCH
Confidence 47888899999998765 56667788899988775321 24567888888853
No 61
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=38.26 E-value=62 Score=25.23 Aligned_cols=51 Identities=16% Similarity=0.165 Sum_probs=37.2
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHH-----HHHHHHHcCceEEEecChHHHHHHHHHhCC
Q psy14917 250 KERINKILATGANVILVSGGIDDL-----CLKYFVEAGAMAVRRVKKVDLKRIAKATGA 303 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~-----al~~l~~~~I~~i~~v~~~~l~~ia~~tGa 303 (407)
++..+.|.+-.+.+|+...+.++. ...++.++||+++..-++.+|- +++|-
T Consensus 37 ~~v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eLG---~a~Gk 92 (122)
T 3o85_A 37 NEALKQVNRGKAELVIIAADADPIEIVLHLPLACEDKGVPYVFIGSKNALG---RACNV 92 (122)
T ss_dssp HHHHHHHHTTCCSEEEEETTCSSGGGGTTHHHHHHTTTCCEEEESCHHHHH---HHTTC
T ss_pred HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHHHH---HHhCC
Confidence 455666667789999999999864 3456788899988877776654 44554
No 62
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=37.35 E-value=49 Score=25.62 Aligned_cols=48 Identities=17% Similarity=0.108 Sum_probs=34.9
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHH-----HHHHHHHcCceEEEecChHHHHHH
Q psy14917 250 KERINKILATGANVILVSGGIDDL-----CLKYFVEAGAMAVRRVKKVDLKRI 297 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~-----al~~l~~~~I~~i~~v~~~~l~~i 297 (407)
++..+.|.+-.+.+|+...+.++. ...++.+++|+++..-++.+|-+.
T Consensus 33 ~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk~eLG~a 85 (119)
T 1rlg_A 33 NETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKNDLGRA 85 (119)
T ss_dssp HHHHHHHTTTCCSEEEEESCCSCSTTTTHHHHHHHHHTCCEEEESCHHHHHHH
T ss_pred HHHHHHHHcCCCcEEEEeCCCChHHHHHHHHHHHHHcCCCEEEeCCHHHHHHH
Confidence 445566666678999999998763 445777889998887777665543
No 63
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=35.94 E-value=1e+02 Score=23.40 Aligned_cols=51 Identities=14% Similarity=0.226 Sum_probs=37.1
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHHHHH----HHHHcCceEEEe-cChHHHHHHHHHhCC
Q psy14917 250 KERINKILATGANVILVSGGIDDLCLK----YFVEAGAMAVRR-VKKVDLKRIAKATGA 303 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~al~----~l~~~~I~~i~~-v~~~~l~~ia~~tGa 303 (407)
++..+.|.+-.+.+||...+.++.... ++.+++|+++.. -++.+|- .++|-
T Consensus 27 ~~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~sk~eLG---~a~G~ 82 (110)
T 3cpq_A 27 KRTIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKITSLELG---AVCGK 82 (110)
T ss_dssp HHHHHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCSCHHHHH---HHTTC
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcCCHHHHH---HHhCC
Confidence 455666777789999999999877664 566779998877 6666654 55554
No 64
>1p90_A NAFY protein, hypothetical protein; ribonuclease H motif, protein binding; 1.80A {Azotobacter vinelandii} SCOP: c.55.5.2
Probab=35.47 E-value=51 Score=26.55 Aligned_cols=30 Identities=20% Similarity=0.259 Sum_probs=26.9
Q ss_pred cCCcEEEeCCCCCHHHHHHHHHcCceEEEec
Q psy14917 259 TGANVILVSGGIDDLCLKYFVEAGAMAVRRV 289 (407)
Q Consensus 259 ~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v 289 (407)
.++++||| ++|.+.+...|.++||.++.-.
T Consensus 66 ~g~~vvi~-~~iG~~a~~~L~~~GI~v~~~~ 95 (145)
T 1p90_A 66 QDCQVLYV-VSIGGPAAAKVVRAGIHPLKKP 95 (145)
T ss_dssp TTCSEEEE-SBCCHHHHHHHHHTTCEEEECT
T ss_pred CCCCEEEE-CCCCHHHHHHHHHcCCEEEEeC
Confidence 48999999 5799999999999999999863
No 65
>2pw9_A Putative formate dehydrogenase accessory protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Desulfotalea psychrophila LSV54} SCOP: c.97.1.5
Probab=30.60 E-value=60 Score=29.22 Aligned_cols=41 Identities=20% Similarity=0.201 Sum_probs=31.2
Q ss_pred HHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecCh
Q psy14917 251 ERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKK 291 (407)
Q Consensus 251 ~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~ 291 (407)
+++.|....|++++++-..-...+.++-.+.||+.+..++.
T Consensus 206 EmV~Kaa~aGIpvlvS~SApTslAV~lA~~~giTLiGf~R~ 246 (268)
T 2pw9_A 206 DMVLKCARIGIPIIMSRTSPSSLGLALAKRSGATLVAYSRP 246 (268)
T ss_dssp HHHHHHHHHTCCEEEESSCBCHHHHHHHHHHTCEEEEEEET
T ss_pred HHHHHHHHcCCCEEEEcccccHHHHHHHHHcCCEEEEEecC
Confidence 45677777788888888888888888888888877776653
No 66
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=29.88 E-value=1.6e+02 Score=21.67 Aligned_cols=51 Identities=20% Similarity=0.178 Sum_probs=36.7
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHHHHH----HHHHcCceEEEe-cChHHHHHHHHHhCC
Q psy14917 250 KERINKILATGANVILVSGGIDDLCLK----YFVEAGAMAVRR-VKKVDLKRIAKATGA 303 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~al~----~l~~~~I~~i~~-v~~~~l~~ia~~tGa 303 (407)
++..+.|.+-.+.+|+...+.++.... ++.+++|+++.. -++.+|- +++|-
T Consensus 22 ~~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~vp~~~~~~s~~eLG---~a~G~ 77 (101)
T 1w41_A 22 RKSIQYAKMGGAKLIIVARNARPDIKEDIEYYARLSGIPVYEFEGTSVELG---TLLGR 77 (101)
T ss_dssp HHHHHHHHHTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESSCHHHHH---HHTTC
T ss_pred HHHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHhcCCCEEEecCCHHHHH---HHhCC
Confidence 455666777789999999998877664 556679998876 6666654 45554
No 67
>2zkr_f 60S ribosomal protein L7A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=29.86 E-value=1.1e+02 Score=27.35 Aligned_cols=51 Identities=10% Similarity=0.094 Sum_probs=38.4
Q ss_pred HHHHHHHHcCCcEEEeCCCCCH-----HHHHHHHHcCceEEEecChHHHHHHHHHh
Q psy14917 251 ERINKILATGANVILVSGGIDD-----LCLKYFVEAGAMAVRRVKKVDLKRIAKAT 301 (407)
Q Consensus 251 ~~v~~i~~~~~~lVi~~~~I~~-----~al~~l~~~~I~~i~~v~~~~l~~ia~~t 301 (407)
..+..|.+-.+.+||.+.++|+ ....+|.+.||+++.--++.+|-..+-.-
T Consensus 142 eV~KaIekgkAkLVIIA~DasP~ei~~~Lp~LC~~~~VPyi~v~sk~eLG~A~Gkk 197 (266)
T 2zkr_f 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGHLVHRK 197 (266)
T ss_dssp HHHHHHHTTCCSEEEEESCCSSSTTTTHHHHHHHHHTCCEEEESCHHHHHHHHTSS
T ss_pred HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCEEEECCHHHHHHHhCCC
Confidence 4566667778999999999988 34577899999988887776665554443
No 68
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=29.79 E-value=75 Score=24.70 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=27.5
Q ss_pred HHHHHHHHHHcCCcEEEeCCCC-CHHHHHHHHHcCceEEE
Q psy14917 249 TKERINKILATGANVILVSGGI-DDLCLKYFVEAGAMAVR 287 (407)
Q Consensus 249 l~~~v~~i~~~~~~lVi~~~~I-~~~al~~l~~~~I~~i~ 287 (407)
..+.++.+.+.|+..|+.+.++ ++.+.+.+.++||-++.
T Consensus 71 v~~~v~e~~~~g~k~v~~~~G~~~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 71 QLSEYNYILSLKPKRVIFNPGTENEELEEILSENGIEPVI 110 (122)
T ss_dssp HGGGHHHHHHHCCSEEEECTTCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhcCCCEEEECCCCChHHHHHHHHHcCCeEEC
Confidence 4566777777888766666655 66777777777777664
No 69
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=29.16 E-value=1.4e+02 Score=27.19 Aligned_cols=57 Identities=18% Similarity=0.211 Sum_probs=41.4
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCeec
Q psy14917 250 KERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASFL 306 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ii 306 (407)
.+.++.+.+.|+++|....+.+....+.+.+.|+.++..+...+.-+.+...|+..+
T Consensus 86 ~~~~~~~~~~g~d~V~~~~g~p~~~~~~l~~~gi~vi~~v~t~~~a~~~~~~GaD~i 142 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAGNDPGEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAV 142 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEESCCHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhcCCCEEEEcCCCcHHHHHHHHHcCCCEEeeCCCHHHHHHHHHcCCCEE
Confidence 455677788899999988777788888898899988877665444344455566544
No 70
>2jnb_A NHP2-like protein 1; splicing, KINK-turn RNA-binding protein, NHPX, RNA binding protein; NMR {Homo sapiens} SCOP: d.79.3.1
Probab=28.34 E-value=24 Score=28.66 Aligned_cols=48 Identities=15% Similarity=0.097 Sum_probs=35.5
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHH-HH----HHHHHcCceEEEecChHHHHHH
Q psy14917 250 KERINKILATGANVILVSGGIDDL-CL----KYFVEAGAMAVRRVKKVDLKRI 297 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~-al----~~l~~~~I~~i~~v~~~~l~~i 297 (407)
++..+.|.+-.+.+|+.+.++++. .. .+|.+.||+++.--++.+|-+.
T Consensus 56 kev~KaI~~gkakLVIIA~D~~p~e~~~~l~~lC~~~~VP~~~v~sk~eLG~a 108 (144)
T 2jnb_A 56 NEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRA 108 (144)
T ss_dssp HHHHHHHHHTCEEEEEEETTCSCHHHHTTSCSSCGGGCCCCEEESCSHHHHHH
T ss_pred HHHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEECCHHHHHHH
Confidence 455677777789999999999995 33 4567889998776676665443
No 71
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=27.78 E-value=52 Score=25.40 Aligned_cols=52 Identities=13% Similarity=0.133 Sum_probs=37.0
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHH-H----HHHHHHcCceEEEecChHHHHHHHHHhCCe
Q psy14917 250 KERINKILATGANVILVSGGIDDL-C----LKYFVEAGAMAVRRVKKVDLKRIAKATGAS 304 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~-a----l~~l~~~~I~~i~~v~~~~l~~ia~~tGa~ 304 (407)
......|.+-.+.+|+...++++. . ..+|.++||+++.--++.+|- +++|-.
T Consensus 31 ~~v~kaI~~gka~LVvIA~D~~p~~i~~~l~~lC~~~~VP~~~v~sk~~LG---~a~G~k 87 (113)
T 3jyw_G 31 NHVVALIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGKARLG---TLVNQK 87 (113)
T ss_dssp HHHHHTTTTTCCSEEEECSCCSSHHHHTTHHHHHHHTTCCCEECSCSTTTH---HHHCSS
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCEEEECCHHHHH---HHHCCC
Confidence 344556666789999999999873 2 356789999999777766554 555543
No 72
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=27.39 E-value=1.7e+02 Score=26.74 Aligned_cols=56 Identities=16% Similarity=0.252 Sum_probs=40.3
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCCee
Q psy14917 250 KERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGASF 305 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa~i 305 (407)
.+.++.+.+.|+++|....+.++...+.+.+.|+.++..+...+.-+-+.-.|+..
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g~p~~~~~~l~~~g~~v~~~v~s~~~a~~a~~~GaD~ 147 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAGNPTKYIRELKENGTKVIPVVASDSLARMVERAGADA 147 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESSCCHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHCCCCEEEECCCCcHHHHHHHHHcCCcEEEEcCCHHHHHHHHHcCCCE
Confidence 45677778889999999888888888999999998887665543333334445543
No 73
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=27.33 E-value=1.2e+02 Score=22.37 Aligned_cols=46 Identities=17% Similarity=0.069 Sum_probs=33.3
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHHHHHH----HHHcCceEEEe-cChHHHH
Q psy14917 250 KERINKILATGANVILVSGGIDDLCLKY----FVEAGAMAVRR-VKKVDLK 295 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~al~~----l~~~~I~~i~~-v~~~~l~ 295 (407)
++..+.|.+-.+.+|+...+.++..... +.+++|+++.. -++.+|-
T Consensus 21 ~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG 71 (99)
T 3j21_Z 21 NETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGTSVELG 71 (99)
T ss_dssp HHHHHHHHHTCCSEEEEECCCCHHHHHHHHHHHHHTTCCEEEECCCSCGGG
T ss_pred HHHHHHHHcCCccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHH
Confidence 4556677777899999999988876654 46788888766 5555553
No 74
>3izc_H 60S ribosomal protein RPL8 (L7AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_H 3o58_H 3o5h_H 3u5e_G 3u5i_G 4b6a_G
Probab=26.63 E-value=1.2e+02 Score=26.96 Aligned_cols=51 Identities=14% Similarity=0.135 Sum_probs=37.7
Q ss_pred HHHHHHHHHcCCcEEEeCCCCCHH-----HHHHHHHcCceEEEecChHHHHHHHHHhCC
Q psy14917 250 KERINKILATGANVILVSGGIDDL-----CLKYFVEAGAMAVRRVKKVDLKRIAKATGA 303 (407)
Q Consensus 250 ~~~v~~i~~~~~~lVi~~~~I~~~-----al~~l~~~~I~~i~~v~~~~l~~ia~~tGa 303 (407)
...+..|.+-.+.+||...++|+. ...+|.+.||+++.--++.+|- .++|-
T Consensus 137 keV~KaIekgKAkLVVIA~DadP~eivk~LpaLC~k~gVPy~~V~sK~eLG---~A~Gk 192 (256)
T 3izc_H 137 NHVVALIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGKARLG---TLVNQ 192 (256)
T ss_dssp HHHHHHHHHTCCSEEEEESCCSSGGGTTHHHHHHHHHTCCEEEESCHHHHH---HHTTC
T ss_pred HHHHHHHHhCcceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEECCHHHHH---HHhCC
Confidence 455667777789999999999875 2567889999988766665554 55554
No 75
>3gfv_A Uncharacterized ABC transporter solute-binding protein YCLQ; alpha-beta-sandwich, periplasmic binding protein fold (PBP fold); 1.75A {Bacillus subtilis subsp}
Probab=24.42 E-value=1.1e+02 Score=27.47 Aligned_cols=51 Identities=20% Similarity=0.247 Sum_probs=35.5
Q ss_pred HHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecC--------hHHHHHHHHHhCCe
Q psy14917 253 INKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVK--------KVDLKRIAKATGAS 304 (407)
Q Consensus 253 v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~--------~~~l~~ia~~tGa~ 304 (407)
+++|.+++|++||... .++...+.|.+.+..++-... .+.++.+++++|-.
T Consensus 88 ~E~i~~l~PDlIi~~~-~~~~~~~~L~~~~p~v~~~~~~~~~~~~~~~~i~~lg~~~g~~ 146 (303)
T 3gfv_A 88 FDKVAELDPDLIIISA-RQSESYKEFSKIAPTIYLGVDTAKYMESFKSDAETIGKIFDKE 146 (303)
T ss_dssp HHHHHHTCCSEEEECG-GGGGGHHHHHHHSCEEECCCCGGGHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhCCCCEEEEcC-cchhHHHHHHhhCCEEEEcCCCcchHHHHHHHHHHHHHHhCCh
Confidence 4778899999999864 566677788887743332322 24578888888854
No 76
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=23.45 E-value=2.4e+02 Score=25.64 Aligned_cols=58 Identities=19% Similarity=0.084 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHcCCcEEEeCCCCCHHHHH----HHHHcCc--eEE----EecChHHHHHHHHHhCCeecc
Q psy14917 246 SDITKERINKILATGANVILVSGGIDDLCLK----YFVEAGA--MAV----RRVKKVDLKRIAKATGASFLT 307 (407)
Q Consensus 246 ~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~----~l~~~~I--~~i----~~v~~~~l~~ia~~tGa~ii~ 307 (407)
.+++++++ +.|++.+++|--.|..... .+.+.|| +++ --.+...+++++..+|+.+=.
T Consensus 166 ~~~Lk~Kv----dAGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~~~~Gv~iP~ 233 (304)
T 3fst_A 166 LLNLKRKV----DAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKLADMTNVRIPA 233 (304)
T ss_dssp HHHHHHHH----HHTCCEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHHHHHHTCCCCH
T ss_pred HHHHHHHH----HcCCCEEEeCccCCHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHHHHcCCCcCCH
Confidence 33445444 4599999999999966544 3345564 333 356788999999999997643
No 77
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=22.75 E-value=1.9e+02 Score=25.97 Aligned_cols=62 Identities=10% Similarity=0.070 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecCh----HHHHHHHHHhCCeec
Q psy14917 243 ARESDITKERINKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKK----VDLKRIAKATGASFL 306 (407)
Q Consensus 243 ~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~----~~l~~ia~~tGa~ii 306 (407)
++|.+++.+.++.|.+ .++.++--...+.+.....++|.-.+..++. .+|-.++.-.|+.++
T Consensus 64 eeE~~Rv~pvi~~l~~--~~v~iSIDT~~~~Va~~al~aGa~iINDVs~g~~d~~m~~~va~~~~~~v 129 (270)
T 4hb7_A 64 EEELNRVLPVVEAIVG--FDVKISVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEII 129 (270)
T ss_dssp HHHHHHHHHHHHHHTT--SSSEEEEECSCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHhhc--CCCeEEEECCCHHHHHHHHHhccceeccccccccchhHHHHHHHcCCCeE
Confidence 3477788899998875 4566666666667777666777777776642 355555555666555
No 78
>2x4l_A Ferric-siderophore receptor protein; transport; 1.50A {Streptomyces coelicolor}
Probab=22.09 E-value=1.4e+02 Score=27.13 Aligned_cols=51 Identities=14% Similarity=0.155 Sum_probs=37.6
Q ss_pred HHHHHHcCCcEEEeCCC--------CCHHHHHHHHHcCceEEEec----C----hHHHHHHHHHhCCe
Q psy14917 253 INKILATGANVILVSGG--------IDDLCLKYFVEAGAMAVRRV----K----KVDLKRIAKATGAS 304 (407)
Q Consensus 253 v~~i~~~~~~lVi~~~~--------I~~~al~~l~~~~I~~i~~v----~----~~~l~~ia~~tGa~ 304 (407)
+++|.+++|+|||.... .++...+.|.+. |+++.-- + .+.++.+++++|..
T Consensus 103 ~E~I~~l~PDLIi~~~~~~~~~~~~~~~~~~~~L~~~-ipvv~~~~~~~~~~~~~~~i~~lg~~~g~e 169 (325)
T 2x4l_A 103 VEKYASLAPEVLITTTFDTAGTLWSVPEESKDKVAKL-APSVAISVFDRQLTQPLQRMWELAESLGAD 169 (325)
T ss_dssp HHHHHHTCCSEEEEEECSTTCCCTTSCGGGHHHHHHH-SCEEEEECSSSCTHHHHHHHHHHHHHTTCC
T ss_pred HHHHhccCCCEEEEcccccccccccccHHHHHHHHhh-CCEEEEccCccchHHHHHHHHHHHHHhCCC
Confidence 47788899999998654 456777888887 8766531 1 25789999999964
No 79
>3tny_A YFIY (ABC transport system substrate-binding PROT; schizokinen, nutrient binding protein, ABC transporter, metal transport; HET: SKZ; 1.55A {Bacillus cereus}
Probab=21.94 E-value=57 Score=29.37 Aligned_cols=52 Identities=12% Similarity=0.105 Sum_probs=37.2
Q ss_pred HHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecCh----HHHHHHHHHhCCe
Q psy14917 253 INKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVKK----VDLKRIAKATGAS 304 (407)
Q Consensus 253 v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~----~~l~~ia~~tGa~ 304 (407)
+++|.+++|+|||.....++...+.|..-++.++..-.. +.++.+++++|-.
T Consensus 89 ~E~I~~l~PDLIi~~~~~~~~~~~~l~~i~p~v~~~~~~~~~~~~i~~lg~~~g~e 144 (303)
T 3tny_A 89 VETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSETLRGEWKDNFKFYAKALNKE 144 (303)
T ss_dssp HHHHHHTCCSEEEEEHHHHGGGHHHHHTTSCEEEECCCTTCHHHHHHHHHHHTTCH
T ss_pred HHHHHcCCCCEEEEeccchHHHHHHhhcCCcEEEeccCcccHHHHHHHHHHHhCch
Confidence 467888999999987666666667777777666654332 4678888888853
No 80
>3sl9_C B-cell CLL/lymphoma 9 protein; armadillo repeat, components of the WNT signaling pathway, B catenin, signaling protein, protein binding; 2.20A {Homo sapiens} PDB: 2gl7_C
Probab=21.55 E-value=1.2e+02 Score=19.21 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=21.8
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHhcCCeEEeC
Q psy14917 357 GPNDFYCDEMERSIHDALCVVKRVLESKNLVAG 389 (407)
Q Consensus 357 g~~~~~l~e~~r~i~dal~~~~~~~~~~~~vpG 389 (407)
|-+++.++-.+|+++..-.+-|..+.|.+=.+|
T Consensus 9 gls~eqlehrerslqtlrdi~r~~~pDdkd~~~ 41 (55)
T 3sl9_C 9 GLSQEQLEHRERSLQTLRDIQRMLFPDEKEFTG 41 (55)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhCCccccccC
Confidence 668899999999999888888888877665554
No 81
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=21.33 E-value=52 Score=26.96 Aligned_cols=65 Identities=17% Similarity=0.190 Sum_probs=40.0
Q ss_pred cccccCceEEEEeec----ccccccccCeEEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHH
Q psy14917 204 KKKITNAKIACLDFS----LQKAKMKLGVEVLVNDPEKLDGIRARESDITKERINKILATGANVILVSGGIDDLCLKYFV 279 (407)
Q Consensus 204 ~~~~~~~kI~l~~~~----L~~~~~~~~~~~~i~~~~~~~~~~~~E~~~l~~~v~~i~~~~~~lVi~~~~I~~~al~~l~ 279 (407)
|+.+++.||+++|+| |....++...+ .+.+++. ....+.-.+.|+.+-+.|..-.....+++.
T Consensus 1 ~~~~~~m~IlvlNGPNLNlLG~REP~iYG~---~Tl~di~----------~~l~~~a~~~g~~v~~~QSN~EGeLId~Ih 67 (156)
T 1gtz_A 1 PRSLANAPIMILNGPNLNLLGQAQPEIYGS---DTLADVE----------ALCVKAAAAHGGTVDFRQSNHEGELVDWIH 67 (156)
T ss_dssp -CCTTTSCEEEEECTTGGGTTTSCHHHHCS---CCHHHHH----------HHHHHHHHTTTCCEEEEECSCHHHHHHHHH
T ss_pred CCCccCceEEEEeCCCccccCCCCCCcCCC---CCHHHHH----------HHHHHHHHHcCCEEEEEeeCCHHHHHHHHH
Confidence 345677889999997 33333333221 1234421 122233345789999999999888888887
Q ss_pred Hc
Q psy14917 280 EA 281 (407)
Q Consensus 280 ~~ 281 (407)
+.
T Consensus 68 ~a 69 (156)
T 1gtz_A 68 EA 69 (156)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 82
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=20.71 E-value=1.5e+02 Score=27.58 Aligned_cols=66 Identities=14% Similarity=0.175 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHH-Hc------CCcEEEeCCCCCHHHHHHHHHcCceEEEecChHHHHHHHHHhCC
Q psy14917 234 DPEKLDGIRARESDITKERINKIL-AT------GANVILVSGGIDDLCLKYFVEAGAMAVRRVKKVDLKRIAKATGA 303 (407)
Q Consensus 234 ~~~~~~~~~~~E~~~l~~~v~~i~-~~------~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~~~~l~~ia~~tGa 303 (407)
+++++++| -..+++++++.+. +. ++.+++..++- ...+.++.+.|+-++..-...++....+..|.
T Consensus 225 sp~~f~ef---~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~-~~~l~~l~~~g~d~i~~d~~~dl~~a~~~~g~ 297 (367)
T 1r3s_A 225 GPQLFNKF---ALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG-HFALEELAQAGYEVVGLDWTVAPKKARECVGK 297 (367)
T ss_dssp CHHHHHHH---THHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC-GGGHHHHTTSSCSEEECCTTSCHHHHHHHHCS
T ss_pred CHHHHHHH---hHHHHHHHHHHHhhhhccccCCCCCeEEEcCCc-HHHHHHHHhcCCCEEEeCCCCCHHHHHHHcCC
Confidence 45665444 5567788888887 65 46665554554 66778888888888876555666666665554
No 83
>2chu_A CEUE, enterochelin uptake periplasmic binding protein; iron, mecam, SELF assembly, siderophore; HET: ECA; 2.40A {Campylobacter jejuni} SCOP: c.92.2.4
Probab=20.40 E-value=1.7e+02 Score=26.00 Aligned_cols=51 Identities=18% Similarity=0.229 Sum_probs=35.8
Q ss_pred HHHHHHcCCcEEEeCCCCCHHHHHHHHHcCceEEEecC--------hHHHHHHHHHhCCe
Q psy14917 253 INKILATGANVILVSGGIDDLCLKYFVEAGAMAVRRVK--------KVDLKRIAKATGAS 304 (407)
Q Consensus 253 v~~i~~~~~~lVi~~~~I~~~al~~l~~~~I~~i~~v~--------~~~l~~ia~~tGa~ 304 (407)
+++|.+++|++||.... ++...+.|.+.+..++-... .+.++.+++++|-.
T Consensus 88 ~E~i~~l~PDLIi~~~~-~~~~~~~L~~~~p~v~~~~~~~~~~~~~~~~i~~lg~~~g~~ 146 (296)
T 2chu_A 88 FEAINALKPDLIIISGR-QSKFYDKLKEIAPTLFVGLDNANFLSSFENNVLSVAKLYGLE 146 (296)
T ss_dssp HHHHHHTCCSEEEECTT-TGGGHHHHHTTSCEEECCCCTTSHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHhCCCCEEEEcCc-cHHHHHHHHhhCCEEEEecCCccchHHHHHHHHHHHHHhCcH
Confidence 57888899999998653 45666778887755553321 34678888888864
Done!