Query psy14918
Match_columns 463
No_of_seqs 267 out of 472
Neff 6.7
Searched_HMMs 29240
Date Sat Aug 17 00:17:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14918.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14918hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ks9_A Substance-P receptor; w 98.8 4.2E-06 1.4E-10 82.9 27.9 149 57-213 36-184 (364)
2 4dkl_A MU-type opioid receptor 98.7 8.6E-07 3E-11 90.4 22.0 153 54-215 18-172 (464)
3 2z73_A Rhodopsin; visual pigme 98.7 3.5E-06 1.2E-10 86.4 25.3 155 47-213 28-190 (448)
4 3odu_A C-X-C chemokine recepto 98.7 1.6E-06 5.4E-11 89.7 22.2 169 37-215 32-202 (502)
5 4ea3_A Fusion protein of nocic 98.6 3.6E-06 1.2E-10 86.3 22.6 147 57-215 129-280 (434)
6 3uon_A Human M2 muscarinic ace 98.5 8.2E-06 2.8E-10 83.3 22.5 153 53-213 23-180 (467)
7 3rze_A Histamine H1 receptor, 98.5 5.2E-06 1.8E-10 84.4 20.6 150 56-213 11-165 (452)
8 4amj_A Beta-1 adrenergic recep 98.5 1.6E-06 5.5E-11 83.4 15.9 150 50-211 8-164 (315)
9 2lnl_A C-X-C chemokine recepto 98.5 4.9E-05 1.7E-09 73.2 26.2 133 58-200 16-149 (296)
10 1u19_A Rhodopsin; G protein-co 98.5 1.9E-05 6.5E-10 77.2 23.0 158 48-213 33-192 (349)
11 3eml_A Human adenosine A2A rec 98.5 1.6E-05 5.4E-10 81.6 22.2 132 55-196 23-156 (488)
12 3pbl_A D(3) dopamine receptor, 98.4 2.5E-05 8.4E-10 80.2 20.3 146 58-212 43-193 (481)
13 4eiy_A Adenosine receptor A2A/ 98.3 4.7E-05 1.6E-09 77.2 21.0 131 56-196 34-166 (447)
14 3sn6_R Lysozyme, beta-2 adrene 98.3 2.7E-05 9.3E-10 81.6 18.1 136 55-198 184-321 (514)
15 3vw7_A Proteinase-activated re 98.2 9.9E-05 3.4E-09 75.7 20.6 152 55-214 22-177 (484)
16 3v2y_A Sphingosine 1-phosphate 98.1 0.00022 7.5E-09 75.0 22.3 152 50-212 60-212 (520)
17 2rh1_A Beta-2-adrenergic recep 98.1 0.00039 1.3E-08 72.5 23.7 134 56-197 43-178 (500)
18 4grv_A Neurotensin receptor ty 97.7 0.0057 2E-07 64.0 22.6 132 61-198 40-176 (510)
19 3ps5_A Tyrosine-protein phosph 82.2 0.27 9.1E-06 52.9 0.0 9 273-281 459-467 (595)
20 3ps5_A Tyrosine-protein phosph 81.4 0.3 1E-05 52.5 0.0 10 134-143 185-194 (595)
21 1914_A Signal recognition part 57.1 1.3 4.4E-05 41.9 -1.6 6 369-374 44-49 (232)
22 3ffd_P PTH-RP, PTHRP, parathyr 45.8 8.9 0.0003 31.4 1.8 13 419-431 69-81 (108)
No 1
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=98.79 E-value=4.2e-06 Score=82.85 Aligned_cols=149 Identities=9% Similarity=0.008 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCcceeccCCCceeeccCCCChhH
Q psy14918 57 SMWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLIRVSVGHEEVACEDQMVRYGASGPTPCTL 136 (463)
Q Consensus 57 ~~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li~~~~g~~~i~C~~~~~~~~~~~~~~C~~ 136 (463)
.....++++++++++++.++++.-++++.+-....++.||++.+++++..+...... .. -++- ..|+..|.+
T Consensus 36 ~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~--~~-~~~~-----~~~~~~C~~ 107 (364)
T 2ks9_A 36 AAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTY--AV-HNEW-----YYGLFYCKF 107 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHH--HH-HTSC-----SSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-cCCc-----cchHHHHHh
Confidence 444557778888888888877776555444446778889999988765433221110 00 0000 001112999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhHHHHHHHHHHhhHHHHHHhhhhccccCCcccceeEeee
Q psy14918 137 VFLLVYFFGMSSYIWWVILSFTWFLAAGLKWGNEAIASYSLYFHLAAWLIPTVKSVSVIIMSAVDGDTIAGICYVGN 213 (463)
Q Consensus 137 ~~~l~yyf~las~~Ww~il~~~w~ls~~~k~~~e~i~~~~~yfh~~aW~iP~v~tii~l~~~~v~~~~~tg~CwIg~ 213 (463)
.+++.+.+..++....++++++=|+++..-.......+......+++|.+++++.+..+....++.++....|....
T Consensus 108 ~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~~ 184 (364)
T 2ks9_A 108 HNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEW 184 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBCTTCSSBCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHHHHhHHHHHhhheecCCCCEEeecC
Confidence 99999999999999999999999988754211122234455667889999999887766666666555566797643
No 2
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=98.75 E-value=8.6e-07 Score=90.44 Aligned_cols=153 Identities=9% Similarity=0.069 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCcceeccCCCceeeccCCCC
Q psy14918 54 EFASMWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLIRVSVGHEEVACEDQMVRYGASGPTP 133 (463)
Q Consensus 54 ~~~~~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li~~~~g~~~i~C~~~~~~~~~~~~~~ 133 (463)
-.+.....++++++++++++.++++.-++++.+-....++.||++.+++++........ .+. .+ -..|+..
T Consensus 18 ~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~p~~~~~---~~~-~~-----~~~~~~~ 88 (464)
T 4dkl_A 18 ITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVN---YLM-GT-----WPFGNIL 88 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH-SS-----CCSCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHh-CC-----cccccch
Confidence 34445555778888889988888877665544444677888999999887763222211 000 00 0011122
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhh--hhhhHHHHHHHHHHhhHHHHHHhhhhccccCCcccceeEe
Q psy14918 134 CTLVFLLVYFFGMSSYIWWVILSFTWFLAAGLKWGNEA--IASYSLYFHLAAWLIPTVKSVSVIIMSAVDGDTIAGICYV 211 (463)
Q Consensus 134 C~~~~~l~yyf~las~~Ww~il~~~w~ls~~~k~~~e~--i~~~~~yfh~~aW~iP~v~tii~l~~~~v~~~~~tg~CwI 211 (463)
|.+.+++.+++..++.+..++++++-|+++..-..... -.+......+++|++++++.+..+....+..+.....|..
T Consensus 89 C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~~~~~c~~ 168 (464)
T 4dkl_A 89 CKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTL 168 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEETTEEECCB
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccCCCceEEe
Confidence 99999999999999999999999999988754211111 1234556778999999999887777666655555567887
Q ss_pred eeCC
Q psy14918 212 GNHN 215 (463)
Q Consensus 212 g~~~ 215 (463)
....
T Consensus 169 ~~~~ 172 (464)
T 4dkl_A 169 TFSH 172 (464)
T ss_dssp CCSS
T ss_pred ecCC
Confidence 5443
No 3
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=98.71 E-value=3.5e-06 Score=86.43 Aligned_cols=155 Identities=12% Similarity=0.105 Sum_probs=103.6
Q ss_pred CcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHH-----HHhcCCcceeccC
Q psy14918 47 FFSQPEREFASMWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLI-----RVSVGHEEVACED 121 (463)
Q Consensus 47 ~ft~~e~~~~~~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li-----~~~~g~~~i~C~~ 121 (463)
-+.+.....+.....++++++++++++.++++.-.+++.+-....++.||++++++++...+ ....++.
T Consensus 28 ~~~~~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~------ 101 (448)
T 2z73_A 28 QVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKW------ 101 (448)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSC------
T ss_pred CCCchHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCc------
Confidence 34455555666777788888889999888877765554444578889999999998775411 1111100
Q ss_pred CCceeeccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch--hhhhhhHHHHHHHHHHhhHHHHHHhhh-hc
Q psy14918 122 QMVRYGASGPTPCTLVFLLVYFFGMSSYIWWVILSFTWFLAAGLKWGN--EAIASYSLYFHLAAWLIPTVKSVSVII-MS 198 (463)
Q Consensus 122 ~~~~~~~~~~~~C~~~~~l~yyf~las~~Ww~il~~~w~ls~~~k~~~--e~i~~~~~yfh~~aW~iP~v~tii~l~-~~ 198 (463)
..+...|.+.+++.+++..+++.+.++++++-|+++..-... ..-.+......+++|++++++++..+. .+
T Consensus 102 ------~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~ 175 (448)
T 2z73_A 102 ------IFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWG 175 (448)
T ss_dssp ------CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSS
T ss_pred ------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhcee
Confidence 001112999999999999999999999999999987542111 111345567789999999998876554 33
Q ss_pred cccCCcccceeEeee
Q psy14918 199 AVDGDTIAGICYVGN 213 (463)
Q Consensus 199 ~v~~~~~tg~CwIg~ 213 (463)
.++.+.....|+...
T Consensus 176 ~~~~~~~~~~c~~~~ 190 (448)
T 2z73_A 176 AYTLEGVLCNCSFDY 190 (448)
T ss_dssp CEEECTTSSSEEECC
T ss_pred eeeecCCceeEeccc
Confidence 344444455688754
No 4
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=98.69 E-value=1.6e-06 Score=89.69 Aligned_cols=169 Identities=13% Similarity=0.060 Sum_probs=108.1
Q ss_pred CCCcCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCcc
Q psy14918 37 NNCAYPCQGIFFSQPEREFASMWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLIRVSVGHEE 116 (463)
Q Consensus 37 ~~C~~pC~~~~ft~~e~~~~~~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li~~~~g~~~ 116 (463)
++-..+|+..-..+-+.-.+.....++++++++++++.++++.-++++.+-....++.||++.+++.+.....+.. .
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~p~~~~~---~ 108 (502)
T 3odu_A 32 DSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVD---A 108 (502)
T ss_dssp -----CCCCCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHHTTHHHHHHH---H
T ss_pred ccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHH---H
Confidence 3344577755555555556666777888888999988887776555544444567788999998875422221110 0
Q ss_pred eeccCCCceeeccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhh--hhhHHHHHHHHHHhhHHHHHHh
Q psy14918 117 VACEDQMVRYGASGPTPCTLVFLLVYFFGMSSYIWWVILSFTWFLAAGLKWGNEAI--ASYSLYFHLAAWLIPTVKSVSV 194 (463)
Q Consensus 117 i~C~~~~~~~~~~~~~~C~~~~~l~yyf~las~~Ww~il~~~w~ls~~~k~~~e~i--~~~~~yfh~~aW~iP~v~tii~ 194 (463)
.. ... .|+..|.+.+++.+.+..++++-.++++++-|+++..-...... .+......+++|++++++.+..
T Consensus 109 ~~-~~~------~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~ 181 (502)
T 3odu_A 109 VA-NWY------FGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPD 181 (502)
T ss_dssp HT-CCC------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHH
T ss_pred hc-CCc------CCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHH
Confidence 00 000 01111999999999999999999999999999987542211111 2233456788999999999888
Q ss_pred hhhccccCCcccceeEeeeCC
Q psy14918 195 IIMSAVDGDTIAGICYVGNHN 215 (463)
Q Consensus 195 l~~~~v~~~~~tg~CwIg~~~ 215 (463)
+....+..+.....|.....+
T Consensus 182 ~~~~~~~~~~~~~~C~~~~~~ 202 (502)
T 3odu_A 182 FIFANVSEADDRYICDRFYPN 202 (502)
T ss_dssp HHHEEEEECSSSEEEEECCSS
T ss_pred HHheeeeccCCceEEeecCCc
Confidence 877776655556779865443
No 5
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=98.63 E-value=3.6e-06 Score=86.29 Aligned_cols=147 Identities=16% Similarity=0.125 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHHHH---hcCCcceeccCCCceeeccCCCC
Q psy14918 57 SMWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLIRV---SVGHEEVACEDQMVRYGASGPTP 133 (463)
Q Consensus 57 ~~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li~~---~~g~~~i~C~~~~~~~~~~~~~~ 133 (463)
.....++++++++++++.++++.-++++.+-....++.||++.+++.+...... ..+.. ..++..
T Consensus 129 ~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~~~~~p~~~~~~~~~~~------------~~~~~~ 196 (434)
T 4ea3_A 129 VGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGFW------------PFGNAL 196 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHTSC------------TTHHHH
T ss_pred HHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHHHHHhHHHHHHHHhcCC------------cCcccH
Confidence 334446777788888888887776555444445777889999988744322211 11100 001112
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh--hhhhhHHHHHHHHHHhhHHHHHHhhhhccccCCcccceeEe
Q psy14918 134 CTLVFLLVYFFGMSSYIWWVILSFTWFLAAGLKWGNE--AIASYSLYFHLAAWLIPTVKSVSVIIMSAVDGDTIAGICYV 211 (463)
Q Consensus 134 C~~~~~l~yyf~las~~Ww~il~~~w~ls~~~k~~~e--~i~~~~~yfh~~aW~iP~v~tii~l~~~~v~~~~~tg~CwI 211 (463)
|.+..++.+++..++.+..++++++-|+++..-.... .-.+......+++|++++++.+..+....+..+.....|.+
T Consensus 197 C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~c~~ 276 (434)
T 4ea3_A 197 CKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLV 276 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCSSCCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeecCceeEEE
Confidence 9999999999999999999999999998875421111 11334456678899999998887777766665555677988
Q ss_pred eeCC
Q psy14918 212 GNHN 215 (463)
Q Consensus 212 g~~~ 215 (463)
....
T Consensus 277 ~~~~ 280 (434)
T 4ea3_A 277 EIPT 280 (434)
T ss_dssp CCCS
T ss_pred ecCC
Confidence 6443
No 6
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=98.55 E-value=8.2e-06 Score=83.35 Aligned_cols=153 Identities=14% Similarity=0.198 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCcceeccCCCceeeccCCC
Q psy14918 53 REFASMWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLIRVSVGHEEVACEDQMVRYGASGPT 132 (463)
Q Consensus 53 ~~~~~~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li~~~~g~~~i~C~~~~~~~~~~~~~ 132 (463)
.-.......++++++++++++.++++.-+++..+-....++.||++.+++++..+...+.. ... .. -..|+.
T Consensus 23 ~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~--~~~-~~-----~~~~~~ 94 (467)
T 3uon_A 23 VVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLY--TVI-GY-----WPLGPV 94 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHH--HHS-SS-----CCSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHH--Hhc-CC-----ccCCcc
Confidence 3445556667888888889888887765555444446778889999998866544332210 000 00 000111
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--cchhhhhhhHHHHHHHHHHhhHHHHHHhhhhccc-c--CCcccc
Q psy14918 133 PCTLVFLLVYFFGMSSYIWWVILSFTWFLAAGLK--WGNEAIASYSLYFHLAAWLIPTVKSVSVIIMSAV-D--GDTIAG 207 (463)
Q Consensus 133 ~C~~~~~l~yyf~las~~Ww~il~~~w~ls~~~k--~~~e~i~~~~~yfh~~aW~iP~v~tii~l~~~~v-~--~~~~tg 207 (463)
.|.+.+++.+.+..++.+..++++++-|+++..- +....-.+......+++|++++++.+.++..... . .+....
T Consensus 95 ~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (467)
T 3uon_A 95 VCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDG 174 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSS
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCC
Confidence 1999999999999999999999999999987442 1111123445567889999999988876654332 1 223345
Q ss_pred eeEeee
Q psy14918 208 ICYVGN 213 (463)
Q Consensus 208 ~CwIg~ 213 (463)
.|....
T Consensus 175 ~C~~~~ 180 (467)
T 3uon_A 175 ECYIQF 180 (467)
T ss_dssp CCCCGG
T ss_pred cceeec
Confidence 698754
No 7
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=98.54 E-value=5.2e-06 Score=84.42 Aligned_cols=150 Identities=12% Similarity=0.057 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCcceeccCCCceeeccCCCChh
Q psy14918 56 ASMWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLIRVSVGHEEVACEDQMVRYGASGPTPCT 135 (463)
Q Consensus 56 ~~~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li~~~~g~~~i~C~~~~~~~~~~~~~~C~ 135 (463)
+.....++++++++++++.++++.-++++.+-....++.|+++.+++++..+...+.. .. -..- ..|+..|.
T Consensus 11 ~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~--~~-~~~~-----~~~~~~C~ 82 (452)
T 3rze_A 11 LVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILY--LL-MSKW-----SLGRPLCL 82 (452)
T ss_dssp GGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHH--HH-SSSC-----SSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHH--HH-cCCc-----cCCchhHh
Confidence 3345567788888889888888776665555556888999999998866544332210 00 0000 00111299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhh--hhhhHHHHHHHHHHhhHHHHHHhhhhccccCCc---ccceeE
Q psy14918 136 LVFLLVYFFGMSSYIWWVILSFTWFLAAGLKWGNEA--IASYSLYFHLAAWLIPTVKSVSVIIMSAVDGDT---IAGICY 210 (463)
Q Consensus 136 ~~~~l~yyf~las~~Ww~il~~~w~ls~~~k~~~e~--i~~~~~yfh~~aW~iP~v~tii~l~~~~v~~~~---~tg~Cw 210 (463)
+.+++.+++..++.+..++++++-|+++..-..... -.+......+++|++++++.+..+....+..+. ....|+
T Consensus 83 ~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~C~ 162 (452)
T 3rze_A 83 FWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTSVRREDKCE 162 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-------CCSSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCeec
Confidence 999999999999999999999999998754221111 234455677899999988877666666654433 445687
Q ss_pred eee
Q psy14918 211 VGN 213 (463)
Q Consensus 211 Ig~ 213 (463)
...
T Consensus 163 ~~~ 165 (452)
T 3rze_A 163 TDF 165 (452)
T ss_dssp CSC
T ss_pred CCC
Confidence 643
No 8
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=98.54 E-value=1.6e-06 Score=83.38 Aligned_cols=150 Identities=17% Similarity=0.119 Sum_probs=94.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHHH----HhcCCcceeccCCCce
Q psy14918 50 QPEREFASMWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLIR----VSVGHEEVACEDQMVR 125 (463)
Q Consensus 50 ~~e~~~~~~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li~----~~~g~~~i~C~~~~~~ 125 (463)
++..........+.++++++++++.++++.-++++.+-....++.+|+++++.++..+.. ...++.
T Consensus 8 ~~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~---------- 77 (315)
T 4amj_A 8 QQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTW---------- 77 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSC----------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCe----------
Confidence 333344555556778888888988888876555544444567788999998865422211 111100
Q ss_pred eeccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhh--hhhhHHHHHHHHHHhhHHHHHHhhhhccc-cC
Q psy14918 126 YGASGPTPCTLVFLLVYFFGMSSYIWWVILSFTWFLAAGLKWGNEA--IASYSLYFHLAAWLIPTVKSVSVIIMSAV-DG 202 (463)
Q Consensus 126 ~~~~~~~~C~~~~~l~yyf~las~~Ww~il~~~w~ls~~~k~~~e~--i~~~~~yfh~~aW~iP~v~tii~l~~~~v-~~ 202 (463)
..|+..|.+.+++.+.+..++....+.++++-|++...-..... -.+......+++|.+++++.+.++..... +.
T Consensus 78 --~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~ 155 (315)
T 4amj_A 78 --LWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDE 155 (315)
T ss_dssp --CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCC
T ss_pred --eccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhcccc
Confidence 00111299999999999999999999999999988754211111 13344566788999999988877765432 22
Q ss_pred CcccceeEe
Q psy14918 203 DTIAGICYV 211 (463)
Q Consensus 203 ~~~tg~CwI 211 (463)
+.....|..
T Consensus 156 ~~~~~~c~~ 164 (315)
T 4amj_A 156 DPQALKCYQ 164 (315)
T ss_dssp SHHHHHHHH
T ss_pred CCCcccccc
Confidence 333334554
No 9
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=98.53 E-value=4.9e-05 Score=73.18 Aligned_cols=133 Identities=13% Similarity=0.104 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCcceeccCCCceeeccCCCChhHH
Q psy14918 58 MWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLIRVSVGHEEVACEDQMVRYGASGPTPCTLV 137 (463)
Q Consensus 58 ~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li~~~~g~~~i~C~~~~~~~~~~~~~~C~~~ 137 (463)
....++.+++++++++.++++.-++++.+-++..++.||++++++++........ .. .+ -..|+..|...
T Consensus 16 i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~~p~~~~~---~~--~~-----~~~~~~~c~~~ 85 (296)
T 2lnl_A 16 IAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAAS---KV--NG-----WIFGTFLCKVV 85 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHHHHHHHHH---HH--SS-----SCCSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHhhhHHHhh---cc--CC-----CccchhHHHHH
Confidence 3334667788888888888887777766667788999999999987754433221 00 00 01122229999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccchh-hhhhhHHHHHHHHHHhhHHHHHHhhhhccc
Q psy14918 138 FLLVYFFGMSSYIWWVILSFTWFLAAGLKWGNE-AIASYSLYFHLAAWLIPTVKSVSVIIMSAV 200 (463)
Q Consensus 138 ~~l~yyf~las~~Ww~il~~~w~ls~~~k~~~e-~i~~~~~yfh~~aW~iP~v~tii~l~~~~v 200 (463)
.++.+.+..++..-.+.+++|=|++...-.... ...+......+++|.+++++.+..+.....
T Consensus 86 ~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~~~~W~~s~~~~~p~~~~~~~ 149 (296)
T 2lnl_A 86 SLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQA 149 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTSSC
T ss_pred hhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhhhhhhHheehHHHHHHHHHhcchhhccee
Confidence 999999999999999999999999874421111 112333445577899999888766654443
No 10
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=98.51 E-value=1.9e-05 Score=77.24 Aligned_cols=158 Identities=11% Similarity=0.078 Sum_probs=101.3
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCcceeccCCCceee
Q psy14918 48 FSQPEREFASMWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLIRVSVGHEEVACEDQMVRYG 127 (463)
Q Consensus 48 ft~~e~~~~~~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li~~~~g~~~i~C~~~~~~~~ 127 (463)
.++.+.........++++++++++++.++++.-.+++.+-....++.+|++.++.++..+...... ... +. -
T Consensus 33 ~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~--~~~-~~-----~ 104 (349)
T 1u19_A 33 AEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYT--SLH-GY-----F 104 (349)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHH--HHH-TS-----C
T ss_pred cchHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHH--Hhc-Ce-----e
Confidence 345555556666678888889999988888776555444345778889999998877654332210 000 00 0
Q ss_pred ccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh-hhhhhHHHHHHHHHHhhHHHHHHhhhh-ccccCCcc
Q psy14918 128 ASGPTPCTLVFLLVYFFGMSSYIWWVILSFTWFLAAGLKWGNE-AIASYSLYFHLAAWLIPTVKSVSVIIM-SAVDGDTI 205 (463)
Q Consensus 128 ~~~~~~C~~~~~l~yyf~las~~Ww~il~~~w~ls~~~k~~~e-~i~~~~~yfh~~aW~iP~v~tii~l~~-~~v~~~~~ 205 (463)
..|+..|.+.+++.+.+..++..-.++++++-|+++..-.... .-.+......+++|.+++++.+.++.. ..++.+..
T Consensus 105 ~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~ 184 (349)
T 1u19_A 105 VFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGM 184 (349)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETT
T ss_pred eCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCccceeeccchhHHHHHHHHHHHHHHHHHHHHheeeeeccCC
Confidence 0011129999999999999999889999999999875421111 113444556788999999988776643 33433344
Q ss_pred cceeEeee
Q psy14918 206 AGICYVGN 213 (463)
Q Consensus 206 tg~CwIg~ 213 (463)
...|....
T Consensus 185 ~~~C~~~~ 192 (349)
T 1u19_A 185 QCSCGIDY 192 (349)
T ss_dssp TTEEECCC
T ss_pred ceeecccc
Confidence 55787643
No 11
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=98.47 E-value=1.6e-05 Score=81.58 Aligned_cols=132 Identities=8% Similarity=0.088 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCcceeccCCCceeeccCCCCh
Q psy14918 55 FASMWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLIRVSVGHEEVACEDQMVRYGASGPTPC 134 (463)
Q Consensus 55 ~~~~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li~~~~g~~~i~C~~~~~~~~~~~~~~C 134 (463)
.......++++++++++++.++++.-++++.+-....++.||++.+++++..+...+.-.. . -..+...|
T Consensus 23 ~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~------~----~~~~~~~C 92 (488)
T 3eml_A 23 VYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST------G----FCAACHGC 92 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT------C----CEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc------c----ccccchHH
Confidence 3444555778888888988888877666544445677788999999887655543221000 0 00111229
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh--hhhhhHHHHHHHHHHhhHHHHHHhhh
Q psy14918 135 TLVFLLVYFFGMSSYIWWVILSFTWFLAAGLKWGNE--AIASYSLYFHLAAWLIPTVKSVSVII 196 (463)
Q Consensus 135 ~~~~~l~yyf~las~~Ww~il~~~w~ls~~~k~~~e--~i~~~~~yfh~~aW~iP~v~tii~l~ 196 (463)
.+.+++.+++..++++-.++++++=|+++..-.... .-.+......+++|++++++.+.++.
T Consensus 93 ~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~ 156 (488)
T 3eml_A 93 LFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPML 156 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999875421111 11344556678999999998876664
No 12
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=98.36 E-value=2.5e-05 Score=80.22 Aligned_cols=146 Identities=11% Similarity=0.074 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCcceeccCCCceeeccCCCChhHH
Q psy14918 58 MWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLIRVSVGHEEVACEDQMVRYGASGPTPCTLV 137 (463)
Q Consensus 58 ~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li~~~~g~~~i~C~~~~~~~~~~~~~~C~~~ 137 (463)
....++++++++++++.++++.-++++.+-....++.||++.+++++..+...+.. ... ... . ..++..|.+.
T Consensus 43 ~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~--~~~-~~~---~-~~~~~~C~~~ 115 (481)
T 3pbl_A 43 LSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYL--EVT-GGV---W-NFSRICCDVF 115 (481)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHH--HHT-TSC---C-CSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHH--HHh-cCc---c-ccCcchhhhH
Confidence 44556777888888888877776555444445667889999988876544322210 000 000 0 0011129999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccch-----hhhhhhHHHHHHHHHHhhHHHHHHhhhhccccCCcccceeEee
Q psy14918 138 FLLVYFFGMSSYIWWVILSFTWFLAAGLKWGN-----EAIASYSLYFHLAAWLIPTVKSVSVIIMSAVDGDTIAGICYVG 212 (463)
Q Consensus 138 ~~l~yyf~las~~Ww~il~~~w~ls~~~k~~~-----e~i~~~~~yfh~~aW~iP~v~tii~l~~~~v~~~~~tg~CwIg 212 (463)
.++.+++..++.+-.++++++-|+++..-... ....+......+++|++++++.+..+..-... .....|.+.
T Consensus 116 ~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~--~~~~~C~~~ 193 (481)
T 3pbl_A 116 VTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTT--GDPTVCSIS 193 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCC--SSTTCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheeccc--CCCCccccc
Confidence 99999999999988999999999887432111 11123445567889999999888776544333 234568875
No 13
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=98.32 E-value=4.7e-05 Score=77.21 Aligned_cols=131 Identities=8% Similarity=0.118 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCcceeccCCCceeeccCCCChh
Q psy14918 56 ASMWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLIRVSVGHEEVACEDQMVRYGASGPTPCT 135 (463)
Q Consensus 56 ~~~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li~~~~g~~~i~C~~~~~~~~~~~~~~C~ 135 (463)
.-....++++++++++++.++.+.-++++.+-....++.||++.+++++..+...+.-.. ..+ .+...|.
T Consensus 34 ~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~-~~~---------~~~~~C~ 103 (447)
T 4eiy_A 34 YITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST-GFC---------AACHGCL 103 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHT-TCE---------EEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccc---------cCccHHH
Confidence 334445677888888888888777655544445677888999999887654432221000 000 0112299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh--hhhhhHHHHHHHHHHhhHHHHHHhhh
Q psy14918 136 LVFLLVYFFGMSSYIWWVILSFTWFLAAGLKWGNE--AIASYSLYFHLAAWLIPTVKSVSVII 196 (463)
Q Consensus 136 ~~~~l~yyf~las~~Ww~il~~~w~ls~~~k~~~e--~i~~~~~yfh~~aW~iP~v~tii~l~ 196 (463)
+..++.+++..++..-.++++++=|+++..-.... .-.+......+++|.+++++.+.++.
T Consensus 104 ~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~ 166 (447)
T 4eiy_A 104 FIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPML 166 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhh
Confidence 99999999999998888999999998875421111 11344556678899999998876664
No 14
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=98.25 E-value=2.7e-05 Score=81.59 Aligned_cols=136 Identities=9% Similarity=0.071 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCcceeccCCCceeeccCCCCh
Q psy14918 55 FASMWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLIRVSVGHEEVACEDQMVRYGASGPTPC 134 (463)
Q Consensus 55 ~~~~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li~~~~g~~~i~C~~~~~~~~~~~~~~C 134 (463)
.+.....++++++++++++.++++.-.+++.+-....++.||++.+++++..+...+.. .+ -.. . ..+..-|
T Consensus 184 ~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~--~~-~~~----~-~~~~~~C 255 (514)
T 3sn6_R 184 GMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAH--IL-TKT----W-TFGNFWC 255 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHH--HH-HTS----C-CSCSHHH
T ss_pred HHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHH--HH-cCC----e-eCCcchh
Confidence 34455567777888888888776665444444445778889999988765433321110 00 000 0 0111129
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhh--hhhhHHHHHHHHHHhhHHHHHHhhhhc
Q psy14918 135 TLVFLLVYFFGMSSYIWWVILSFTWFLAAGLKWGNEA--IASYSLYFHLAAWLIPTVKSVSVIIMS 198 (463)
Q Consensus 135 ~~~~~l~yyf~las~~Ww~il~~~w~ls~~~k~~~e~--i~~~~~yfh~~aW~iP~v~tii~l~~~ 198 (463)
.+.+++.+++..++..-.++++++=|+++..-..... -.+......+++|.+++++.+.++...
T Consensus 256 ~~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~ 321 (514)
T 3sn6_R 256 EFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMH 321 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 9999999999999999899999999988754211111 134455677899999999887776544
No 15
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=98.20 E-value=9.9e-05 Score=75.72 Aligned_cols=152 Identities=13% Similarity=0.117 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCcceeccCCCceeeccCCCCh
Q psy14918 55 FASMWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLIRVSVGHEEVACEDQMVRYGASGPTPC 134 (463)
Q Consensus 55 ~~~~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li~~~~g~~~i~C~~~~~~~~~~~~~~C 134 (463)
.+.....++++++++++++.++++.-+++..+-....++.||++.+++.+........ .+.- .. -..|+..|
T Consensus 22 ~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~---~~~~-~~----~~~~~~~C 93 (484)
T 3vw7_A 22 FVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISY---YFSG-SD----WQFGSELC 93 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHH---HHTT-SC----CCSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhc-CC----cccchhHH
Confidence 3444555777888888888887777665544444577788999999886543332221 0000 00 00011129
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhh--hhhhHHHHHHHHHHhhHHHHHHhhhhccc--cCCcccceeE
Q psy14918 135 TLVFLLVYFFGMSSYIWWVILSFTWFLAAGLKWGNEA--IASYSLYFHLAAWLIPTVKSVSVIIMSAV--DGDTIAGICY 210 (463)
Q Consensus 135 ~~~~~l~yyf~las~~Ww~il~~~w~ls~~~k~~~e~--i~~~~~yfh~~aW~iP~v~tii~l~~~~v--~~~~~tg~Cw 210 (463)
.+.+++.+++..++++-.++++++=|+++..-..... -.+......+++|++++++.+..+..... ..+.....|.
T Consensus 94 ~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C~ 173 (484)
T 3vw7_A 94 RFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTCH 173 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEES
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCceee
Confidence 9999999999999999999999999988754221111 13445567789999999988777654433 2233345687
Q ss_pred eeeC
Q psy14918 211 VGNH 214 (463)
Q Consensus 211 Ig~~ 214 (463)
....
T Consensus 174 ~~~~ 177 (484)
T 3vw7_A 174 DVLS 177 (484)
T ss_dssp SSCS
T ss_pred ccCC
Confidence 6443
No 16
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=98.15 E-value=0.00022 Score=74.98 Aligned_cols=152 Identities=9% Similarity=0.036 Sum_probs=98.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCcceeccCCCceeecc
Q psy14918 50 QPEREFASMWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLIRVSVGHEEVACEDQMVRYGAS 129 (463)
Q Consensus 50 ~~e~~~~~~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li~~~~g~~~i~C~~~~~~~~~~ 129 (463)
+.+...+.....++.+++++++++.++++.-+++..+-....++.||++++++++..+...+.. ..... ..
T Consensus 60 ~~~~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~--------~~ 130 (520)
T 3v2y_A 60 ENSIKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTY--------KL 130 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGT--------TS
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccce--------ee
Confidence 3333455556667888888888888888776665445456777889999999988766544431 00000 01
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh-hhhhhHHHHHHHHHHhhHHHHHHhhhhccccCCcccce
Q psy14918 130 GPTPCTLVFLLVYFFGMSSYIWWVILSFTWFLAAGLKWGNE-AIASYSLYFHLAAWLIPTVKSVSVIIMSAVDGDTIAGI 208 (463)
Q Consensus 130 ~~~~C~~~~~l~yyf~las~~Ww~il~~~w~ls~~~k~~~e-~i~~~~~yfh~~aW~iP~v~tii~l~~~~v~~~~~tg~ 208 (463)
+...|.+..++.+++..++++-.++++++=|+++..-+... .-.+......+++|++++++.+.++..-.... ....
T Consensus 131 ~~~~c~~~~~~~~~~~~~S~~~l~~isidRy~aI~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~--~~~~ 208 (520)
T 3v2y_A 131 TPAQWFLREGSMFVALSASVFSLLAIAIERYITMLKMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCIS--ALSS 208 (520)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCTT--CGGG
T ss_pred CccccchHHHHHHHHHHHHHHHHHHHHHHHhhEEeccccccccchhHHHHHHHHHHHHHHHHHHHHHHeecccc--CCCc
Confidence 11229999999999999999999999999999876211111 11234455678899999998887765333222 2346
Q ss_pred eEee
Q psy14918 209 CYVG 212 (463)
Q Consensus 209 CwIg 212 (463)
|...
T Consensus 209 C~~~ 212 (520)
T 3v2y_A 209 CSTV 212 (520)
T ss_dssp BCSS
T ss_pred cccc
Confidence 8754
No 17
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=98.13 E-value=0.00039 Score=72.54 Aligned_cols=134 Identities=9% Similarity=0.072 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCcceeccCCCceeeccCCCChh
Q psy14918 56 ASMWIFVMSALCCISTLMTLTTFLIDTERFKYPERPIVFLSGCYFMVSIGYLIRVSVGHEEVACEDQMVRYGASGPTPCT 135 (463)
Q Consensus 56 ~~~~~~v~s~i~~~~tlftilTF~i~~~r~~yp~r~iifls~c~~~~sl~~li~~~~g~~~i~C~~~~~~~~~~~~~~C~ 135 (463)
+-....++++++++++++.++++..++++.+-....++.||++.+++.+..+...+.. .+. .. . ..|+..|.
T Consensus 43 ~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~--~~~-~~----w-~~~~~~C~ 114 (500)
T 2rh1_A 43 MGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAH--ILM-KM----W-TFGNFWCE 114 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHH--HHH-TS----C-CSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHH--HHh-CC----C-cCCcchhh
Confidence 3344556777888888888887776555444446778889999988876433221110 000 00 0 00111299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh--hhhhhHHHHHHHHHHhhHHHHHHhhhh
Q psy14918 136 LVFLLVYFFGMSSYIWWVILSFTWFLAAGLKWGNE--AIASYSLYFHLAAWLIPTVKSVSVIIM 197 (463)
Q Consensus 136 ~~~~l~yyf~las~~Ww~il~~~w~ls~~~k~~~e--~i~~~~~yfh~~aW~iP~v~tii~l~~ 197 (463)
+.+++.+++..++++-.++++++-|+++..-.... .-.+......+++|++++++.++++..
T Consensus 115 ~~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~ 178 (500)
T 2rh1_A 115 FWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQM 178 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchhe
Confidence 99999999999999989999999999875321111 113445567789999999988767654
No 18
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=97.65 E-value=0.0057 Score=63.99 Aligned_cols=132 Identities=13% Similarity=0.056 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCC---CchHHHHHHHHHHHHHHHHHHHHhcCCcceeccCCCceeeccCCCChhHH
Q psy14918 61 FVMSALCCISTLMTLTTFLIDTERFKY---PERPIVFLSGCYFMVSIGYLIRVSVGHEEVACEDQMVRYGASGPTPCTLV 137 (463)
Q Consensus 61 ~v~s~i~~~~tlftilTF~i~~~r~~y---p~r~iifls~c~~~~sl~~li~~~~g~~~i~C~~~~~~~~~~~~~~C~~~ 137 (463)
.++.+++++++++.++++.-+++..+- ....|+.||++.+++++..+...+.. .+.-... -.-|+.-|.+.
T Consensus 40 ~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~--~~~~~~~----w~~g~~~C~~~ 113 (510)
T 4grv_A 40 LALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYN--FIWVHHP----WAFGDAGCRGY 113 (510)
T ss_dssp HHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTTCCSS----CSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhCCC----EEhhHHHHHHH
Confidence 345566777777777776644432221 13457788999988776544221210 0000000 00011119999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccc--cchhhhhhhHHHHHHHHHHhhHHHHHHhhhhc
Q psy14918 138 FLLVYFFGMSSYIWWVILSFTWFLAAGLK--WGNEAIASYSLYFHLAAWLIPTVKSVSVIIMS 198 (463)
Q Consensus 138 ~~l~yyf~las~~Ww~il~~~w~ls~~~k--~~~e~i~~~~~yfh~~aW~iP~v~tii~l~~~ 198 (463)
+++.+.+..++++-.++++++=|+++..- .....-.+......+++|++++++.+.++...
T Consensus 114 ~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~ 176 (510)
T 4grv_A 114 YFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTM 176 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHE
T ss_pred HHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999987431 11101133455677899999999887666543
No 19
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}
Probab=82.22 E-value=0.27 Score=52.92 Aligned_cols=9 Identities=33% Similarity=0.593 Sum_probs=4.2
Q ss_pred HHHHHHHHH
Q psy14918 273 RIGIFSVLS 281 (463)
Q Consensus 273 rigif~~ly 281 (463)
|.|.|..+.
T Consensus 459 RTGtfiaid 467 (595)
T 3ps5_A 459 RTGTIIVID 467 (595)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 445554433
No 20
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}
Probab=81.37 E-value=0.3 Score=52.53 Aligned_cols=10 Identities=30% Similarity=0.218 Sum_probs=4.7
Q ss_pred hhHHHHHHHH
Q psy14918 134 CTLVFLLVYF 143 (463)
Q Consensus 134 C~~~~~l~yy 143 (463)
-++.-++-||
T Consensus 185 ~sl~~LV~~y 194 (595)
T 3ps5_A 185 DSLTDLVEHF 194 (595)
T ss_dssp SSHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 3444444454
No 21
>1914_A Signal recognition particle 9/14 fusion protein; ALU domain, RNA binding, signal recognition particle (SRP), translation regulation; 2.53A {Mus musculus} SCOP: d.49.1.1 d.49.1.1 PDB: 1e8o_A* 1e8s_A 1ry1_C*
Probab=57.13 E-value=1.3 Score=41.85 Aligned_cols=6 Identities=33% Similarity=0.467 Sum_probs=2.9
Q ss_pred ceeecc
Q psy14918 369 RVLINT 374 (463)
Q Consensus 369 ~~~~~~ 374 (463)
++.++.
T Consensus 44 SV~lT~ 49 (232)
T 1914_A 44 SVFITL 49 (232)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 445554
No 22
>3ffd_P PTH-RP, PTHRP, parathyroid hormone-related protein; PTHRP complexed to FAB, alternative splicing, calcium, cleavage on PAIR of basic residues; 2.00A {Homo sapiens} PDB: 1bzg_A
Probab=45.76 E-value=8.9 Score=31.38 Aligned_cols=13 Identities=15% Similarity=0.143 Sum_probs=6.5
Q ss_pred cCCCCCcccchhh
Q psy14918 419 KQNPYSSHVHKNE 431 (463)
Q Consensus 419 ~q~~~~s~~kk~~ 431 (463)
-|+..++..-||.
T Consensus 69 pQETnK~~~Ykdq 81 (108)
T 3ffd_P 69 TQETNKVETYKEQ 81 (108)
T ss_pred Ccccchhhhcccc
Confidence 3444555555554
Done!