RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14920
(586 letters)
>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic
subunit alpha isoform, PP2A-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 288
Score = 357 bits (918), Expect = e-121
Identities = 243/252 (96%), Positives = 248/252 (98%)
Query: 326 EITEILAKESNVQEVKCPVTVCGDVHGQFHDLMELFKIGGKSPDTNYLFMGDYVDRGYYS 385
+ EIL KESNVQEV+CPVTVCGDVHGQFHDLMELF+IGGKSPDTNYLFMGDYVDRGYYS
Sbjct: 29 KAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYS 88
Query: 386 VETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKFFTDLFDYL 445
VETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWK+FTDLFDYL
Sbjct: 89 VETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYL 148
Query: 446 PLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISP 505
PLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISP
Sbjct: 149 PLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISP 208
Query: 506 RGAGYTFGQDISETFNHSNGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQA 565
RGAGYTFGQDISETFNH+NGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQA
Sbjct: 209 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQA 268
Query: 566 AIMELDDGLKYS 577
AIMELDD LKYS
Sbjct: 269 AIMELDDTLKYS 280
Score = 47.7 bits (113), Expect = 2e-06
Identities = 26/37 (70%), Positives = 31/37 (83%), Gaps = 4/37 (10%)
Query: 8 KELDQWIEQLNECKQLTESQVKTLCDKEIRKAMEVFS 44
KELDQWIEQLNECKQL+ESQVK+LC+ KA E+ +
Sbjct: 3 KELDQWIEQLNECKQLSESQVKSLCE----KAKEILT 35
>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A
subunit) {Human (Homo sapiens) [TaxId: 9606]}
Length = 473
Score = 340 bits (872), Expect = e-111
Identities = 116/263 (44%), Positives = 158/263 (60%), Gaps = 15/263 (5%)
Query: 326 EITEILAKESNVQEVKCPVTVCGDVHGQFHDLMELFKIGGKSPDTNYLFMGDYVDRGYYS 385
E IL +E N+ ++ PVTVCGD+HGQF DLM+LF++GG +T YLF+GDYVDRGY+S
Sbjct: 54 EGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFS 113
Query: 386 VETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKFFTDLFDYL 445
+E V L ALK+ Y + + +LRGNHE R +T+ + F EC KY + V+ D FD L
Sbjct: 114 IECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCL 172
Query: 446 PLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDR------- 498
PL AL++ Q C+HGGLSP I+TLD IR LDR +E P GPMCD+LWSDP +
Sbjct: 173 PLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQ 232
Query: 499 -GGWGISPRGAGYTFGQDISETFNHSNGLTLVSRAHQLVMEGYNWCHDR------NVVTI 551
+ RG Y + F N L + RAH+ GY +++TI
Sbjct: 233 EHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITI 292
Query: 552 FSAPNYCYRCGNQAAIMELDDGL 574
FSAPNY N+AA+++ ++ +
Sbjct: 293 FSAPNYLDVYNNKAAVLKYENNV 315
>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo
sapiens), beta isoform [TaxId: 9606]}
Length = 294
Score = 328 bits (841), Expect = e-109
Identities = 124/253 (49%), Positives = 175/253 (69%), Gaps = 2/253 (0%)
Query: 326 EITEILAKESNVQEVKCPVTVCGDVHGQFHDLMELFKIGGKSPDTNYLFMGDYVDRGYYS 385
+ EI + + E++ P+ +CGD+HGQ++DL+ LF+ GG P++NYLF+GDYVDRG S
Sbjct: 36 KSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 95
Query: 386 VETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKFFTDLFDYL 445
+ET+ LL+A K++Y E +LRGNHE I ++YGFYDEC R+Y N +WK FTD F+ L
Sbjct: 96 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCL 154
Query: 446 PLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDR-GGWGIS 504
P+ A+VD +IFC HGGLSP + +++ IR + R +VP +G +CDLLWSDPD GWG +
Sbjct: 155 PIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGEN 214
Query: 505 PRGAGYTFGQDISETFNHSNGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQ 564
RG +TFG ++ F H + L L+ RAHQ+V +GY + R +VT+FSAPNYC N
Sbjct: 215 DRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNA 274
Query: 565 AAIMELDDGLKYS 577
A+M +D+ L S
Sbjct: 275 GAMMSVDETLMCS 287
Score = 31.2 bits (70), Expect = 0.30
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 12/45 (26%)
Query: 10 LDQWIEQLNECK--------QLTESQVKTLCDKEIRKAMEVFSLQ 46
+D I++L E + QL E++++ LC K+ E+F Q
Sbjct: 4 IDSIIQRLLEVRGSKPGKNVQLQENEIRGLCL----KSREIFLSQ 44
>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5
{Human (Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 323 bits (829), Expect = e-107
Identities = 107/253 (42%), Positives = 159/253 (62%), Gaps = 7/253 (2%)
Query: 326 EITEILAKESNVQEVKC----PVTVCGDVHGQFHDLMELFKIGGKSPDTN-YLFMGDYVD 380
++ E+L+K S + E +TVCGD HGQF+DL+ +F++ G +TN Y+F GD+VD
Sbjct: 40 QVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVD 99
Query: 381 RGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKFFTD 440
RG +SVE + L K+ Y + +LRGNHE+ + Q+YGF E KY A +++ F++
Sbjct: 100 RGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKY-TAQMYELFSE 158
Query: 441 LFDYLPLTALVDGQIFCLHGGL-SPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRG 499
+F++LPL ++G++ +HGGL S TLD IR ++R ++ P GPMCDLLWSDP +
Sbjct: 159 VFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQN 218
Query: 500 GWGISPRGAGYTFGQDISETFNHSNGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCY 559
G IS RG FG D+++ F N L + R+H++ EGY H VT+FSAPNYC
Sbjct: 219 GRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCD 278
Query: 560 RCGNQAAIMELDD 572
+ GN+A+ + L
Sbjct: 279 QMGNKASYIHLQG 291
Score = 30.7 bits (69), Expect = 0.43
Identities = 5/40 (12%), Positives = 14/40 (35%), Gaps = 4/40 (10%)
Query: 7 LKELDQWIEQLNECKQLTESQVKTLCDKEIRKAMEVFSLQ 46
+ + + ++ + K+L + + EV S
Sbjct: 13 ISFMKELMQWYKDQKKLHRKCAYQIL----VQVKEVLSKL 48
>d1iica1 d.108.1.2 (A:34-218) N-myristoyl transferase, NMT {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 185
Score = 268 bits (687), Expect = 4e-88
Identities = 96/183 (52%), Positives = 126/183 (68%), Gaps = 12/183 (6%)
Query: 59 KQYQFWSTQPVPKIDEKITTNGPIELDKSPSEIRAEPYSLPPGFQWDTLNLDDPLVLEEL 118
K ++FW TQPV DEK+ GPI+ K+P +I +P L F+W ++++D+ LE++
Sbjct: 3 KDHKFWRTQPVKDFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDV 62
Query: 119 YKLLNENYVEDEDSM------------ALQAPGWCKEWHCGVRVSKSNVLVAFISAIPAT 166
+ LLNENYVED D+ AL++PGW K+WH GVRV ++ LVAFISAIP T
Sbjct: 63 FVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVT 122
Query: 167 LSIYGVSQKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLKGLFQAVYTAGVVLPKPVG 226
L + G VEINFLCVHK+LRSKR+ PVLI+EITRRVN ++ A+YTAG+VLP PV
Sbjct: 123 LGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVS 182
Query: 227 TCR 229
TCR
Sbjct: 183 TCR 185
>d1iyka1 d.108.1.2 (A:60-224) N-myristoyl transferase, NMT {Yeast
(Candida albicans) [TaxId: 5476]}
Length = 165
Score = 243 bits (621), Expect = 1e-78
Identities = 84/164 (51%), Positives = 110/164 (67%), Gaps = 14/164 (8%)
Query: 80 GPIELDKSPSEIRAEPYSLPPGFQWDTLNLDDPLVLEELYKLLNENYVEDEDSM------ 133
GPI+ K+P ++ +P L F+W TL++DD L L+ELYKLL +NYVED D+
Sbjct: 2 GPIDKLKTPEDVPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKYS 61
Query: 134 ------ALQAPGWCKEWHCGVRVSKSNVLVAFISAIPATLSIYGV--SQKMVEINFLCVH 185
AL+ PGW K+WH GVRV + LVAFI+A P T + VEINFLC+H
Sbjct: 62 HEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIH 121
Query: 186 KKLRSKRVAPVLIREITRRVNLKGLFQAVYTAGVVLPKPVGTCR 229
KKLR+KR+APVLI+EITRRVN + ++QA+YT G +LP P+ TCR
Sbjct: 122 KKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCR 165
>d1rxta1 d.108.1.2 (A:78-218) N-myristoyl transferase, NMT {Human
(Homo sapiens) [TaxId: 9606]}
Length = 141
Score = 216 bits (551), Expect = 2e-68
Identities = 99/141 (70%), Positives = 110/141 (78%), Gaps = 12/141 (8%)
Query: 101 GFQWDTLNLDDPLVLEELYKLLNENYVEDEDSM------------ALQAPGWCKEWHCGV 148
GF WD L+L D VL+ELY LLNENYVED+D+M AL+ PGW +WHCGV
Sbjct: 1 GFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGV 60
Query: 149 RVSKSNVLVAFISAIPATLSIYGVSQKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLK 208
RV S LV FISAIPA + IY +KMVEINFLCVHKKLRSKRVAPVLIREITRRV+L+
Sbjct: 61 RVVSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLE 120
Query: 209 GLFQAVYTAGVVLPKPVGTCR 229
G+FQAVYTAGVVLPKPVGTCR
Sbjct: 121 GIFQAVYTAGVVLPKPVGTCR 141
>d1rxta2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Human
(Homo sapiens) [TaxId: 9606]}
Length = 201
Score = 158 bits (401), Expect = 7e-46
Identities = 63/103 (61%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
Query: 230 YWHRSLNPKKLIEVKFSHLSRNMTMKRTLKLYGLPETTKVFGFRPLQEADIPKAHKVLCE 289
YWHRSLNP+KLIEVKFSHLSRNMTM+RT+KLY LPET K G RP++ DIP H++L
Sbjct: 1 YWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTR 60
Query: 290 FFLRFDLAPIFSEEEFKHWFLPRDGIVYTFVVEN-DGEITEIL 331
+ +F L P+ S+EE +HWF P++ I+ TFVVEN +GE+T+ L
Sbjct: 61 YLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFL 103
>d1iyka2 d.108.1.2 (A:225-451) N-myristoyl transferase, NMT {Yeast
(Candida albicans) [TaxId: 5476]}
Length = 227
Score = 157 bits (399), Expect = 3e-45
Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
Query: 230 YWHRSLNPKKLIEVKFSHLSRNMTMKRTLKLYGLPETTKVFGFRPLQEADIPKAHKVLCE 289
Y HR +N KL +V FSHL N T + Y LP K+ G RP+ D+ +L +
Sbjct: 1 YQHRPINWSKLHDVGFSHLPPNQTKSSMVASYTLPNNPKLKGLRPMTGKDVSTVLSLLYK 60
Query: 290 FFLRFDLAPIFSEEEFKHWFLPRD-----GIVYTFVVEN-DGEITE 329
+ RFD+ +F+EEEFKHW L D +V ++VVE+ +G IT+
Sbjct: 61 YQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGIITD 106
>d1iica2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 237
Score = 155 bits (392), Expect = 3e-44
Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 7/107 (6%)
Query: 230 YWHRSLNPKKLIEVKFSHLSRNMTMKRTLKLYGLPETTKVFGFRPLQEADIPKAHKVLCE 289
Y HR LN KKL EV F+ L T + + LP TK G R L++ DI + ++
Sbjct: 1 YTHRPLNWKKLYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFELFKR 60
Query: 290 FFLRFDLAPIFSEEEFKHWFLPRDG------IVYTFVVEN-DGEITE 329
+ RF+L IF++EEF+H F+ + +++++VVE DG+IT+
Sbjct: 61 YQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITD 107
>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 251
Score = 69.3 bits (168), Expect = 8e-14
Identities = 23/236 (9%), Positives = 58/236 (24%), Gaps = 28/236 (11%)
Query: 343 PVTVCGDVHGQFHDLMELFKI-----GGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKV 397
V V ++ G L Y +G+ V Y E + ++ L
Sbjct: 2 YVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLT- 60
Query: 398 RYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKFFTDLFDYLPLTALVDGQIFC 457
+E + I+RG ++ D +
Sbjct: 61 -KKENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGH-----------------VKKAL 102
Query: 458 LHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDIS 517
+ +++R L G ++ P + + + +
Sbjct: 103 KFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMR 162
Query: 518 ETFNHSNGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDG 573
++ + +V+ V + ++ A++++D
Sbjct: 163 PVKDYE--MLIVASPMYPVDAMTRYGRVVCPGSV--GFPPGKEHKATFALVDVDTL 214
>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase
{Bacteriophage lambda [TaxId: 10710]}
Length = 219
Score = 66.8 bits (162), Expect = 4e-13
Identities = 32/173 (18%), Positives = 48/173 (27%), Gaps = 21/173 (12%)
Query: 344 VTVCGDVHGQFHDLMELF-KIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRER 402
+ V GD+HG + +LM IG + + +GD VDRG +VE + L
Sbjct: 15 IWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLEL------ITFPW 68
Query: 403 ITILRGNHESRQITQVYGFYDECLR-----------KYGNANVWKFFTDLFDYLPL---T 448
+RGNHE I + + Y + K D LPL
Sbjct: 69 FRAVRGNHEQMMIDGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIEL 128
Query: 449 ALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGW 501
D + H ++
Sbjct: 129 VSKDKKYVICHADYPFDEYEFGKPVDHQQVIWNRERISNSQNGIVKEIKGADT 181
>d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353
{Enterococcus faecalis [TaxId: 1351]}
Length = 291
Score = 54.6 bits (130), Expect = 9e-09
Identities = 30/230 (13%), Positives = 71/230 (30%), Gaps = 31/230 (13%)
Query: 115 LEELYKLLNENYVEDEDSMA----------LQAPGWCKEWHCGVRVSKSNVLVAFISAIP 164
+++ +LL+ + E + +++ E N L++ I+ P
Sbjct: 11 IDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLISQIAIYP 70
Query: 165 ATLSIYGVSQKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLKGLFQAVYTAGVVLPKP 224
++I+G KM + + + + + + LI+ + +
Sbjct: 71 CEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTALEEM-----------------RQ 113
Query: 225 VGTCRYWHRSLNPKKLIEVKFSHLSRNMTMKRTLKLYGLPETTKVFGFRPLQEADIPKAH 284
+ N + +S ++ ++ LP+T V G D P
Sbjct: 114 DKQWISYLFPYNIPYYRRKGWEIMSDKLSF--KIRDTQLPKTVPVPGMIERLAVDHPDVF 171
Query: 285 KVLCEFFLRFDLAPIFSEEEFKHWFL--PRDGIVYTFVVENDGEITEILA 332
V F + A I S ++ ++ + + E +L
Sbjct: 172 DVYARFARQNHGALIRSAFNWEEYWRFENEEERTAAVYYGANQEPLGVLF 221
>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 46.1 bits (108), Expect = 2e-06
Identities = 18/139 (12%), Positives = 40/139 (28%), Gaps = 7/139 (5%)
Query: 344 VTVCGDVHGQFHDLMELFKIGGKSPDTNYLFMGDYVDRGYYSVETVTL----LVALKVRY 399
+ D+HG + ++ +S + +GD ++ G + +V
Sbjct: 4 LMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV 63
Query: 400 RERITILRGNHE---SRQITQVYGFYDECLRKYGNANVWKFFTDLFDYLPLTALVDGQIF 456
++ +RGN + + + ++ LF L AL +
Sbjct: 64 AHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPENLPALNQNDVL 123
Query: 457 CLHGGLSPSIDTLDHIRAL 475
P + I
Sbjct: 124 VYGHTHLPVAEQRGEIFHF 142
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus
thermophilus [TaxId: 274]}
Length = 228
Score = 35.5 bits (80), Expect = 0.012
Identities = 12/147 (8%), Positives = 29/147 (19%), Gaps = 3/147 (2%)
Query: 346 VCGDVHGQFHDLMELFKIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITI 405
+ G L + K+ + +G+ + + +
Sbjct: 10 ATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKA-AKSRDYAAFFRILSEAHLPTAY 68
Query: 406 LRGNHESRQITQVYGFYDECLRKYGNANVWKFFTDLFDYLPLTALVDGQIFCLHGGLSPS 465
+ G ++ Y + T F P G G
Sbjct: 69 VPGPQDAPIWE--YLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEH 126
Query: 466 IDTLDHIRALDRLQEVPHEGPMCDLLW 492
+ + E ++
Sbjct: 127 EALRYPAWVAEYRLKALWELKDYPKIF 153
>d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021
{Enterococcus faecalis [TaxId: 1351]}
Length = 285
Score = 35.6 bits (81), Expect = 0.014
Identities = 11/95 (11%), Positives = 37/95 (38%)
Query: 115 LEELYKLLNENYVEDEDSMALQAPGWCKEWHCGVRVSKSNVLVAFISAIPATLSIYGVSQ 174
++E++ L+ + ++ + + L + + A P ++ +GV
Sbjct: 13 MKEMFDLVIYAFNQEPTAERQERFEKLLSHTQSYGFLIDEQLTSQVMATPFQVNFHGVRY 72
Query: 175 KMVEINFLCVHKKLRSKRVAPVLIREITRRVNLKG 209
M I ++ + + R + +++E+ + +
Sbjct: 73 PMAGIGYVASYPEYRGEGGISAIMKEMLADLAKQK 107
>d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 297
Score = 34.2 bits (78), Expect = 0.038
Identities = 26/199 (13%), Positives = 61/199 (30%), Gaps = 36/199 (18%)
Query: 31 LCDKEIRKAMEVFSLQQRSAKTPEEALQ--------KQYQFWSTQ--PVPKIDEKITTNG 80
++I +++ FS Q A E L+ + + ++ E + G
Sbjct: 78 SLHRDIVQSVSFFSWQPDGAAELWECLEQTQLIEWTQGALLTNVDLGFCNRVKELAVSRG 137
Query: 81 PIELDKS---------PSEIRAEPYSLPPGFQWDTLNLDDPLVLEELYKLLNENYVEDED 131
+ A+ LP F+ L +D ++ + + E +
Sbjct: 138 VTAIQPRQCFGMVLSHEDAFCAKVPDLPSEFEIRRLRAEDAAMVHDSWPNKGEGSLTYLQ 197
Query: 132 SMALQAPGWCKEWHCGVRVSKSNVLVAFISAIPATLSIYGVSQKMVEINFLCVHKKLRSK 191
++ G+ S + L+A+I + + + L V K +
Sbjct: 198 ALVRFNKSL------GICRSDTGELIAWI-----FQNDFS------GLGMLQVLPKAERR 240
Query: 192 RVAPVLIREITRRVNLKGL 210
+ +L ++R +
Sbjct: 241 GLGGLLAAAMSREIARGEE 259
>d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 160
Score = 31.3 bits (69), Expect = 0.18
Identities = 12/60 (20%), Positives = 20/60 (33%), Gaps = 7/60 (11%)
Query: 272 FRPLQEADIPKAHKVLCEFFLRFDLAPI----FSEEEFKHWFLPRDGIVYTFVVENDGEI 327
RP + D+ + F P FS + R G + V +DG++
Sbjct: 5 HRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRG---STVAVHDGQV 61
>d1yrea1 d.108.1.1 (A:11-193) Hypothetical protein PA3270
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 183
Score = 30.2 bits (67), Expect = 0.44
Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Query: 273 RPLQEADIPKAHKVLC--EFFLRFDLAPIFSEEEFKHWFLPRDGIVYTFVVENDGEI 327
PL EADIP+ + L++ P + + R+G V ++
Sbjct: 13 EPLVEADIPELVSLAEANREALQYMDGPTRPDWYRQSLAEQREGRALPLAVRLGVQL 69
>d1m7ja2 b.92.1.6 (A:420-480) N-acyl-D-aminoacid amidohydrolase
{Alcaligenes faecalis [TaxId: 511]}
Length = 61
Score = 27.8 bits (62), Expect = 0.62
Identities = 12/43 (27%), Positives = 15/43 (34%), Gaps = 4/43 (9%)
Query: 294 FDLAPIFSEEEFKHWFLPRDGIVYTFV----VENDGEITEILA 332
FD A + F+H GI +V V D T A
Sbjct: 13 FDPATVADSATFEHPTERAAGIHSVYVNGAAVWEDQSFTGQHA 55
>d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 308
Score = 29.7 bits (65), Expect = 1.0
Identities = 6/55 (10%), Positives = 12/55 (21%), Gaps = 1/55 (1%)
Query: 273 RPLQEADIPKAHKVLCEFFLRFDLAPIFSEEEFKHWFLPRDGIVYTFVVENDGEI 327
L + ++ D E+ + R + G I
Sbjct: 6 SALTADEQRSVRALVTATT-AVDGVAPVGEQVLRELGQQRTEHLLVAGSRPGGPI 59
>d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase
GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 157
Score = 28.4 bits (62), Expect = 1.4
Identities = 11/76 (14%), Positives = 22/76 (28%), Gaps = 14/76 (18%)
Query: 263 LPETTKVFGFRPLQEADIPKAHKVLCEFFLRFDLAPIFSEEEFKHWF-----------LP 311
LP+ F R ++E D+ + + L + P + K+W
Sbjct: 1 LPDG---FYIRRMEEGDLEQVTETLKVLTTVGTITPESFCKLIKYWNEATVWNDNEDKKI 57
Query: 312 RDGIVYTFVVENDGEI 327
V + +
Sbjct: 58 MQYNPMVIVDKRTETV 73
>d1mk4a_ d.108.1.1 (A:) Hypothetical protein YqiY {Bacillus subtilis
[TaxId: 1423]}
Length = 157
Score = 28.1 bits (61), Expect = 1.8
Identities = 9/55 (16%), Positives = 18/55 (32%), Gaps = 6/55 (10%)
Query: 273 RPLQEADIPKAHKVLCEFFLRFDLAPIFSEEEFKHWFLPRDGIVYTFVVENDGEI 327
R + +D VL E++ L F+H+ +F+ +
Sbjct: 5 RTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHF------QDTSFITSEHNSM 53
>d1h54a2 b.30.5.3 (A:1-268) Lactobacillus maltose phosphorylase,
N-terminal domain {Lactobacillus brevis [TaxId: 1580]}
Length = 268
Score = 27.7 bits (61), Expect = 4.0
Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 16/82 (19%)
Query: 406 LRGNHE------SRQITQVYGFYDECLRKYGNANVW--KFFTDL---FDYLPLTALVDGQ 454
+RG+ E S Q + G + + G K+F + +++ L ++G+
Sbjct: 38 MRGDFEEGYSGDSLQGIYLGGVWYPDKTRVGWWKNGYPKYFGKVVNAVNFIKLPIEINGE 97
Query: 455 IFCLHGGLSPSIDTLDHIRALD 476
L D LD
Sbjct: 98 PVDLAKD-----KISDFTLDLD 114
>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId:
2261]}
Length = 333
Score = 27.8 bits (60), Expect = 4.1
Identities = 24/146 (16%), Positives = 41/146 (28%), Gaps = 1/146 (0%)
Query: 373 LFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA 432
L GD S T+ +AL +E + + TQ L +G
Sbjct: 45 LIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNHDRTQRGPSVLNLLEDFGLV 104
Query: 433 NVWKFFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLW 492
V + + LT+ G L G+ ++ E ++ + L
Sbjct: 105 YVIGMRKEKVENEYLTSERLGNGEYLVKGVYKDLEIHGMKYMSSAWFE-ANKEILKRLFR 163
Query: 493 SDPDDRGGWGISPRGAGYTFGQDISE 518
+ R G+D E
Sbjct: 164 PTDNAILMLHQGVREVSEARGEDYFE 189
>d2ae6a1 d.108.1.1 (A:1-161) Putative acetyltransferase EF0244
{Enterococcus faecalis [TaxId: 1351]}
Length = 161
Score = 27.0 bits (58), Expect = 4.4
Identities = 9/56 (16%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Query: 272 FRPLQEADIPKAHKVLCEFFLRFDLAPIFSEEEFKHWFLPRDGIVYTFVVENDGEI 327
R + EAD P H + + P + + + FV + ++
Sbjct: 7 IRLVAEADWPALHALDQIIW-TKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQL 61
>d2ikba1 d.2.1.9 (A:1-163) Hypothetical protein NMB1012 {Neisseria
meningitidis [TaxId: 487]}
Length = 163
Score = 26.8 bits (59), Expect = 5.0
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 9/37 (24%)
Query: 473 RALDRLQEVPHEGPMCDLLWSDPDDRGGW---GISPR 506
+ ++R+ + HEG + P D GG GI+ R
Sbjct: 7 QFINRV--LSHEGGYAN----HPKDPGGETNWGITKR 37
>d1ufha_ d.108.1.1 (A:) Putative acetyltransferase YycN {Bacillus
subtilis [TaxId: 1423]}
Length = 155
Score = 26.5 bits (57), Expect = 5.4
Identities = 8/68 (11%), Positives = 19/68 (27%), Gaps = 12/68 (17%)
Query: 272 FRPLQEADIPKAHKVLCEFFLR---------FDLAPIFSEEEFKHWF---LPRDGIVYTF 319
P+Q + + + + A + S++ F L
Sbjct: 4 LTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWS 63
Query: 320 VVENDGEI 327
+ N+ +I
Sbjct: 64 LKLNEKDI 71
>d1cjwa_ d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep (Ovis
aries) [TaxId: 9940]}
Length = 166
Score = 26.5 bits (57), Expect = 6.1
Identities = 9/57 (15%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Query: 272 FRPLQEADIPKAHKVLCEFFLRFDLAPIFSEEEFKHWFLPRDGIVYTFVVENDGEIT 328
FR L D ++ E F+ + +E +H+ + +G +
Sbjct: 8 FRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFL--TLCPELSLGWFVEGRLV 62
>d2fiaa1 d.108.1.1 (A:1-157) Probable acetyltransferase EF1919
{Enterococcus faecalis [TaxId: 1351]}
Length = 157
Score = 26.2 bits (56), Expect = 8.5
Identities = 7/58 (12%), Positives = 18/58 (31%), Gaps = 3/58 (5%)
Query: 272 FRPLQEADIPKAHKVLCEFFLRFDLAPIFSEEE---FKHWFLPRDGIVYTFVVENDGE 326
R E ++P + L E D+ I + + +++ ++
Sbjct: 3 IRVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEM 60
>d1muka_ e.8.1.4 (A:) Reovirus polymerase lambda3 {Reovirus [TaxId:
10891]}
Length = 1264
Score = 26.9 bits (59), Expect = 9.7
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Query: 424 ECLRKYGNANVWKF---FTDLFDYLPLTALVDGQI 455
E + KYG WK+ + +YL L + +I
Sbjct: 757 ELISKYGEEFGWKYDIAYDGTAEYLKLYFIFGCRI 791
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.138 0.431
Gapped
Lambda K H
0.267 0.0556 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,336,086
Number of extensions: 115308
Number of successful extensions: 350
Number of sequences better than 10.0: 1
Number of HSP's gapped: 333
Number of HSP's successfully gapped: 39
Length of query: 586
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 496
Effective length of database: 1,171,896
Effective search space: 581260416
Effective search space used: 581260416
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.4 bits)