BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14921
(148 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1D5V|A Chain A, Solution Structure Of The Forkhead Domain Of The
Adipocyte- Transcription Factor Freac-11 (S12)
Length = 94
Score = 107 bits (267), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
+K SY +LI +AI NAP+ ++TLN IYQFI FP+YRE GW+NSIRHNLSLN+CF
Sbjct: 3 VKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 62
Query: 70 TKVARPKDDPGKGSYWAID 88
KV R PGKGSYW +D
Sbjct: 63 VKVPRDDKKPGKGSYWTLD 81
>pdb|1VTN|C Chain C, Co-Crystal Structure Of The Hnf-3FORK HEAD
DNA-Recognition Motif Resembles Histone H5
Length = 102
Score = 100 bits (248), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 53/73 (72%)
Query: 15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
SY SLI +AI AP +TL+EIYQ+I FPYYRE W+NSIRH+LS N CF KVAR
Sbjct: 7 SYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVAR 66
Query: 75 PKDDPGKGSYWAI 87
D PGKGSYWA+
Sbjct: 67 SPDKPGKGSYWAL 79
>pdb|2C6Y|A Chain A, Crystal Structure Of Interleukin Enhancer-Binding Factor
1 Bound To Dna
pdb|2C6Y|B Chain B, Crystal Structure Of Interleukin Enhancer-Binding Factor
1 Bound To Dna
Length = 111
Score = 99.0 bits (245), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 56/74 (75%)
Query: 15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
SYA LI AI+ AP ++TLN IY IT +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct: 20 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 79
Query: 75 PKDDPGKGSYWAID 88
+++PGKGS+W ID
Sbjct: 80 SQEEPGKGSFWRID 93
>pdb|1JXS|A Chain A, Solution Structure Of The Dna-Binding Domain Of
Interleukin Enhancer Binding Factor
Length = 98
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 56/74 (75%)
Query: 15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
SYA LI AI+ AP ++TLN IY IT +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct: 7 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 66
Query: 75 PKDDPGKGSYWAID 88
+++PGKGS+W ID
Sbjct: 67 SQEEPGKGSFWRID 80
>pdb|2A3S|A Chain A, Solution Structure And Dynamics Of Dna-Binding Domain Of
Myocyte Nuclear Factor
pdb|2D2W|A Chain A, Solution Structure And Dynamics Of The Dna-Binding
Domain Of Myocyte Nuclear Factor
Length = 101
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 56/74 (75%)
Query: 15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
SYA LI AIS+A ++TL+ IY IT +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct: 7 SYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 66
Query: 75 PKDDPGKGSYWAID 88
+++PGKGS+W ID
Sbjct: 67 SQEEPGKGSFWRID 80
>pdb|2HFH|A Chain A, The Nmr Structures Of A Winged Helix Protein: Genesis,
20 Structures
Length = 109
Score = 95.1 bits (235), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
+K SY +LI +AI +PQ ++TL+ I +FI++ FPYYRE W+NSIRHNLSLN CF
Sbjct: 2 VKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCF 61
Query: 70 TKVARPKDDPGKGSYWAID 88
K+ R +PGKG+YW +D
Sbjct: 62 VKIPREPGNPGKGNYWTLD 80
>pdb|2HDC|A Chain A, Structure Of Transcription Factor GenesisDNA COMPLEX
Length = 97
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 55/74 (74%)
Query: 15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
SY +LI +AI +PQ ++TL+ I +FI++ FPYYRE W+NSIRHNLSLN CF K+ R
Sbjct: 6 SYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPR 65
Query: 75 PKDDPGKGSYWAID 88
+PGKG+YW +D
Sbjct: 66 EPGNPGKGNYWTLD 79
>pdb|1KQ8|A Chain A, Solution Structure Of Winged Helix Protein Hfh-1
Length = 100
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
SY +LI +AI ++ GR+TL EI +++ FP++R + GW+NS+RHNLSLN CF KV R
Sbjct: 6 SYIALITMAIRDSAGGRLTLAEINEYLMGKFPFFRGSYTGWRNSVRHNLSLNDCFVKVLR 65
Query: 75 PKDDP-GKGSYWAIDYN--HTADDGPSKKK 101
P GK +YW ++ N +T DG +++
Sbjct: 66 DPSRPWGKDNYWMLNPNSEYTFADGVFRRR 95
>pdb|2KIU|A Chain A, Solution Structure And Backbone Dynamics Of The
Dna-Binding Domain Of Foxp1: Insight Into Its Domain
Swapping
Length = 87
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
+YASLIR AI +P+ ++TLNEIY + T FPY+R A WKN++RHNLSL+K F +V
Sbjct: 8 TYASLIRQAILESPEKQLTLNEIYNWFTRMFPYFRRNAATWKNAVRHNLSLHKYFVRV-- 65
Query: 75 PKDDPGKGSYWAIDYNHTADDGPSK 99
+ KG+ W +D P K
Sbjct: 66 ---ENVKGAVWTVDEVEFQKRRPQK 87
>pdb|3QRF|F Chain F, Structure Of A Domain-Swapped Foxp3 Dimer
pdb|3QRF|G Chain G, Structure Of A Domain-Swapped Foxp3 Dimer
pdb|3QRF|H Chain H, Structure Of A Domain-Swapped Foxp3 Dimer
pdb|3QRF|I Chain I, Structure Of A Domain-Swapped Foxp3 Dimer
Length = 82
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 5/74 (6%)
Query: 15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
+YA+LIR AI AP+ + TLNEIY + T F ++R A WKN+IRHNLSL+KCF +V
Sbjct: 6 TYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFVRV-- 63
Query: 75 PKDDPGKGSYWAID 88
+ KG+ W +D
Sbjct: 64 ---ESEKGAVWTVD 74
>pdb|2A07|F Chain F, Crystal Structure Of Foxp2 Bound Specifically To Dna.
pdb|2A07|G Chain G, Crystal Structure Of Foxp2 Bound Specifically To Dna.
pdb|2A07|H Chain H, Crystal Structure Of Foxp2 Bound Specifically To Dna.
pdb|2A07|I Chain I, Crystal Structure Of Foxp2 Bound Specifically To Dna.
pdb|2A07|J Chain J, Crystal Structure Of Foxp2 Bound Specifically To Dna.
pdb|2A07|K Chain K, Crystal Structure Of Foxp2 Bound Specifically To Dna.
pdb|2AS5|F Chain F, Structure Of The Dna Binding Domains Of Nfat And Foxp2
Bound Specifically To Dna.
pdb|2AS5|G Chain G, Structure Of The Dna Binding Domains Of Nfat And Foxp2
Bound Specifically To Dna
Length = 93
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 5/74 (6%)
Query: 15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
+YA+LIR AI + ++TLNEIY + T TF Y+R A WKN++RHNLSL+KCF +V
Sbjct: 7 TYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRV-- 64
Query: 75 PKDDPGKGSYWAID 88
+ KG+ W +D
Sbjct: 65 ---ENVKGAVWTVD 75
>pdb|1E17|A Chain A, Solution Structure Of The Dna Binding Domain Of The Human
Forkhead Transcription Factor Afx (Foxo4)
Length = 150
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 9 NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYRE-----ANAGWKNSIRHNL 63
N SYA LI AI +AP+ R+TL +IY+++ T PY+++ ++AGWKNSIRHNL
Sbjct: 38 NAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKGDSNSSAGWKNSIRHNL 97
Query: 64 SLNKCFTKVARPKDDPGKGSYWAID 88
SL+ F KV + GK S+W ++
Sbjct: 98 SLHSKFIKVH--NEATGKSSWWMLN 120
>pdb|3L2C|A Chain A, Crystal Structure Of The Dna Binding Domain Of Foxo4 Bound
To Dna
Length = 110
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 9 NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYRE-----ANAGWKNSIRHNL 63
N SYA LI AI +AP+ R+TL +IY+++ T PY+++ ++AGWKNSIRHNL
Sbjct: 22 NAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKGDSNSSAGWKNSIRHNL 81
Query: 64 SLNKCFTKVARPKDDPGKGSYWAID 88
SL+ F KV + GK S+W ++
Sbjct: 82 SLHSKFIKVH--NEATGKSSWWMLN 104
>pdb|2UZK|A Chain A, Crystal Structure Of The Human Foxo3a-Dbd Bound To Dna
pdb|2UZK|C Chain C, Crystal Structure Of The Human Foxo3a-Dbd Bound To Dna
Length = 97
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 11/99 (11%)
Query: 15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYRE-----ANAGWKNSIRHNLSLNKCF 69
SYA LI AI ++P R+TL++IY+++ PY+++ ++AGWKNSIRHNLSL+ F
Sbjct: 5 SYADLITRAIESSPDKRLTLSQIYEWMVRCVPYFKDKGDSNSSAGWKNSIRHNLSLHSRF 64
Query: 70 TKVARPKDDPGKGSYWAIDYNHTADDGPSKKKVKLPRVS 108
+V + GK S+W I+ D G S K + VS
Sbjct: 65 MRV--QNEGTGKSSWWIIN----PDGGKSGKAPRRRAVS 97
>pdb|2K86|A Chain A, Solution Structure Of Foxo3a Forkhead Domain
Length = 103
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 7/79 (8%)
Query: 15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYRE-----ANAGWKNSIRHNLSLNKCF 69
SYA LI AI ++P R+TL++IY+++ PY+++ ++AGWKNSIRHNLSL+ F
Sbjct: 13 SYADLITRAIESSPDKRLTLSQIYEWMVRCVPYFKDKGDSNSSAGWKNSIRHNLSLHSRF 72
Query: 70 TKVARPKDDPGKGSYWAID 88
+V + GK S+W I+
Sbjct: 73 MRV--QNEGTGKSSWWIIN 89
>pdb|3CO6|C Chain C, Crystal Structure Of Foxo1 Dbd Bound To Dbe1 Dna
Length = 100
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 54/79 (68%), Gaps = 7/79 (8%)
Query: 15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYRE-----ANAGWKNSIRHNLSLNKCF 69
SYA LI AI ++ + R+TL++IY+++ + PY+++ ++AGWKNSIRHNLSL+ F
Sbjct: 15 SYADLITKAIESSAEKRLTLSQIYEWMVKSVPYFKDKGDSNSSAGWKNSIRHNLSLHSKF 74
Query: 70 TKVARPKDDPGKGSYWAID 88
+V + GK S+W ++
Sbjct: 75 IRV--QNEGTGKSSWWMLN 91
>pdb|3CO7|C Chain C, Crystal Structure Of Foxo1 Dbd Bound To Dbe2 Dna
pdb|3CO7|F Chain F, Crystal Structure Of Foxo1 Dbd Bound To Dbe2 Dna
pdb|3COA|C Chain C, Crystal Structure Of Foxo1 Dbd Bound To Ire Dna
pdb|3COA|F Chain F, Crystal Structure Of Foxo1 Dbd Bound To Ire Dna
Length = 117
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 54/79 (68%), Gaps = 7/79 (8%)
Query: 15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYRE-----ANAGWKNSIRHNLSLNKCF 69
SYA LI AI ++ + R+TL++IY+++ + PY+++ ++AGWKNSIRHNLSL+ F
Sbjct: 15 SYADLITKAIESSAEKRLTLSQIYEWMVKSVPYFKDKGDSNSSAGWKNSIRHNLSLHSKF 74
Query: 70 TKVARPKDDPGKGSYWAID 88
+V + GK S+W ++
Sbjct: 75 IRV--QNEGTGKSSWWMLN 91
>pdb|3G73|A Chain A, Structure Of The Foxm1 Dna Binding
pdb|3G73|B Chain B, Structure Of The Foxm1 Dna Binding
Length = 142
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYRE-ANAGWKNSIRHNLSLNKCFTKVA 73
SY ++I+ AI++ + RMTL +IY +I FPY++ A GWKNSIRHNLSL+ F
Sbjct: 22 SYMAMIQFAINSTERKRMTLKDIYTWIEDHFPYFKHIAKPGWKNSIRHNLSLHDMF---V 78
Query: 74 RPKDDPGKGSYWAI 87
R GK S+W I
Sbjct: 79 RETSANGKVSFWTI 92
>pdb|2F5V|A Chain A, Reaction Geometry And Thermostability Mutant Of Pyranose
2-Oxidase From The White-Rot Fungus Peniophora Sp
Length = 595
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 177 YFQTGTDQFKESIRHNLVLNKLAEEYKGQRD 207
>pdb|3K4J|A Chain A, Pyranose 2-Oxidase H450q Mutant
Length = 623
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 205 YFQTGTDQFKESIRHNLVLNKLTEEYKGQRD 235
>pdb|3K4C|A Chain A, Pyranose 2-Oxidase H167aT169G MUTANT
pdb|3K4C|B Chain B, Pyranose 2-Oxidase H167aT169G MUTANT
pdb|3K4C|C Chain C, Pyranose 2-Oxidase H167aT169G MUTANT
pdb|3K4C|D Chain D, Pyranose 2-Oxidase H167aT169G MUTANT
Length = 623
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 205 YFQTGTDQFKESIRHNLVLNKLTEEYKGQRD 235
>pdb|3K4K|A Chain A, Pyranose 2-Oxidase F454n Mutant
pdb|3K4L|A Chain A, Pyranose 2-Oxidase F454n Mutant In Complex With 2fg
pdb|3K4L|B Chain B, Pyranose 2-Oxidase F454n Mutant In Complex With 2fg
Length = 623
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 205 YFQTGTDQFKESIRHNLVLNKLTEEYKGQRD 235
>pdb|2IGM|A Chain A, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|B Chain B, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|D Chain D, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|C Chain C, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|E Chain E, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|F Chain F, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|G Chain G, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|H Chain H, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
Length = 623
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 205 YFQTGTDQFKESIRHNLVLNKLTEEYKGQRD 235
>pdb|2F6C|A Chain A, Reaction Geometry And Thermostability Of Pyranose
2-Oxidase From The White-Rot Fungus Peniophora Sp.,
Thermostability Mutant E542k
Length = 595
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 177 YFQTGTDQFKESIRHNLVLNKLAEEYKGQRD 207
>pdb|1TT0|A Chain A, Crystal Structure Of Pyranose 2-Oxidase
pdb|1TT0|B Chain B, Crystal Structure Of Pyranose 2-Oxidase
pdb|1TT0|C Chain C, Crystal Structure Of Pyranose 2-Oxidase
pdb|1TT0|D Chain D, Crystal Structure Of Pyranose 2-Oxidase
pdb|2IGK|A Chain A, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|B Chain B, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|C Chain C, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|D Chain D, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|E Chain E, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|F Chain F, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|G Chain G, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|H Chain H, Crystal Structure Of Recombinant Pyranose 2-Oxidase
Length = 623
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 205 YFQTGTDQFKESIRHNLVLNKLTEEYKGQRD 235
>pdb|3K4B|A Chain A, Pyranose 2-Oxidase T169s Mutant
pdb|3LSK|A Chain A, Pyranose 2-Oxidase T169s Acetate Complex
pdb|3LSK|B Chain B, Pyranose 2-Oxidase T169s Acetate Complex
pdb|3LSK|C Chain C, Pyranose 2-Oxidase T169s Acetate Complex
pdb|3LSK|D Chain D, Pyranose 2-Oxidase T169s Acetate Complex
Length = 623
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 205 YFQTGTDQFKESIRHNLVLNKLTEEYKGQRD 235
>pdb|3BG6|A Chain A, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|B Chain B, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|C Chain C, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|D Chain D, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|E Chain E, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|F Chain F, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|G Chain G, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|H Chain H, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
Length = 623
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 205 YFQTGTDQFKESIRHNLVLNKLTEEYKGQRD 235
>pdb|2IGN|A Chain A, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|B Chain B, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|D Chain D, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|C Chain C, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|E Chain E, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|F Chain F, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|H Chain H, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|G Chain G, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGO|A Chain A, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|B Chain B, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|D Chain D, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|C Chain C, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|E Chain E, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|F Chain F, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|H Chain H, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|G Chain G, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|3LSM|A Chain A, Pyranose 2-Oxidase H167a Mutant With Flavin N(5) Sulfite
Adduct
pdb|3LSM|B Chain B, Pyranose 2-Oxidase H167a Mutant With Flavin N(5) Sulfite
Adduct
pdb|3PL8|A Chain A, Pyranose 2-Oxidase H167a Complex With
3-Deoxy-3-Fluoro-Beta-D-Glucose
Length = 623
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 205 YFQTGTDQFKESIRHNLVLNKLTEEYKGQRD 235
>pdb|3LSH|A Chain A, Pyranose 2-Oxidase T169a, Monoclinic
pdb|3LSH|B Chain B, Pyranose 2-Oxidase T169a, Monoclinic
pdb|3LSH|C Chain C, Pyranose 2-Oxidase T169a, Monoclinic
pdb|3LSH|D Chain D, Pyranose 2-Oxidase T169a, Monoclinic
pdb|3LSI|A Chain A, Pyranose 2-Oxidase T169a, Tetragonal
pdb|3LSI|B Chain B, Pyranose 2-Oxidase T169a, Tetragonal
Length = 623
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 205 YFQTGTDQFKESIRHNLVLNKLTEEYKGQRD 235
>pdb|3K4N|A Chain A, Pyranose 2-Oxidase F454aS455AY456A MUTANT
pdb|3K4N|B Chain B, Pyranose 2-Oxidase F454aS455AY456A MUTANT
Length = 623
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 205 YFQTGTDQFKESIRHNLVLNKLTEEYKGQRD 235
>pdb|3BG7|A Chain A, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|B Chain B, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|C Chain C, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|D Chain D, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|E Chain E, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|F Chain F, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|G Chain G, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|H Chain H, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
Length = 623
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 205 YFQTGTDQFKESIRHNLVLNKLTEEYKGQRD 235
>pdb|1TZL|A Chain A, Crystal Structure Of Pyranose 2-Oxidase From The White-Rot
Fungus Peniophora Sp.
pdb|1TZL|B Chain B, Crystal Structure Of Pyranose 2-Oxidase From The White-Rot
Fungus Peniophora Sp.
pdb|1TZL|C Chain C, Crystal Structure Of Pyranose 2-Oxidase From The White-Rot
Fungus Peniophora Sp.
pdb|1TZL|D Chain D, Crystal Structure Of Pyranose 2-Oxidase From The White-Rot
Fungus Peniophora Sp.
pdb|1TZL|E Chain E, Crystal Structure Of Pyranose 2-Oxidase From The White-Rot
Fungus Peniophora Sp.
pdb|1TZL|F Chain F, Crystal Structure Of Pyranose 2-Oxidase From The White-Rot
Fungus Peniophora Sp.
pdb|1TZL|G Chain G, Crystal Structure Of Pyranose 2-Oxidase From The White-Rot
Fungus Peniophora Sp.
pdb|1TZL|H Chain H, Crystal Structure Of Pyranose 2-Oxidase From The White-Rot
Fungus Peniophora Sp
Length = 622
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 204 YFQTGTDQFKESIRHNLVLNKLAEEYKGQRD 234
>pdb|3K4M|A Chain A, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|B Chain B, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|C Chain C, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|D Chain D, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|E Chain E, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|F Chain F, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|G Chain G, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|H Chain H, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
Length = 623
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 205 YFQTGTDQFKESIRHNLVLNKLTEEYKGQRD 235
>pdb|3FDY|A Chain A, Pyranose 2-Oxidase Thermostable Triple Mutant,
T169gE542KV546C
Length = 623
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 205 YFQTGTDQFKESIRHNLVLNKLTEEYKGQRD 235
>pdb|3BLY|A Chain A, Pyranose 2-Oxidase From Trametes Multicolor, E542kL537W
Length = 623
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 47 YYREANAGWKNSIRHNLSLNKCFTKVARPKD 77
Y++ +K SIRHNL LNK + +D
Sbjct: 205 YFQTGTDQFKESIRHNLVLNKLTEEYKGQRD 235
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,608,443
Number of Sequences: 62578
Number of extensions: 177346
Number of successful extensions: 306
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 264
Number of HSP's gapped (non-prelim): 35
length of query: 148
length of database: 14,973,337
effective HSP length: 90
effective length of query: 58
effective length of database: 9,341,317
effective search space: 541796386
effective search space used: 541796386
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.7 bits)