BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy14921
LCITYKTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIR
HNLSLNKCFTKVARPKDDPGKGSYWAIDYNHTADDGPSKKKVKLPRVSPYSPVECNNSNS
SSDVHNSKPPTSISSVPNTVSFFSDPLQ

High Scoring Gene Products

Symbol, full name Information P value
FoxJ2
Forkhead transcription factor J2
protein from Strongylocentrotus purpuratus 1.6e-31
Foxj3
forkhead box J3
protein from Mus musculus 1.2e-30
FOXJ3
Uncharacterized protein
protein from Bos taurus 1.4e-30
FOXJ3
Uncharacterized protein
protein from Canis lupus familiaris 1.6e-30
FOXJ3
Forkhead box protein J3
protein from Homo sapiens 2.0e-30
FOXJ3
Forkhead box J3, isoform CRA_b
protein from Homo sapiens 2.3e-30
Foxj3
forkhead box J3
gene from Rattus norvegicus 5.6e-30
foxj2
Forkhead box protein J2
protein from Xenopus (Silurana) tropicalis 2.2e-27
Ci-FoxJ2
Transcription factor protein
protein from Ciona intestinalis 3.2e-27
foxj2
Forkhead box protein J2
protein from Xenopus laevis 4.8e-27
foxi1c
Forkhead box protein I1c
protein from Xenopus laevis 5.8e-27
foxi1c
Forkhead box protein I1c
protein from Xenopus (Silurana) tropicalis 7.4e-27
FOXI1
Uncharacterized protein
protein from Gallus gallus 5.1e-26
FOXI3
Uncharacterized protein
protein from Gallus gallus 6.4e-26
FOXJ2
Uncharacterized protein
protein from Canis lupus familiaris 5.7e-25
foxj2
forkhead box J2
gene_product from Danio rerio 6.5e-25
FOXJ2
Forkhead box protein J2
protein from Homo sapiens 7.4e-25
Foxj2
forkhead box J2
protein from Mus musculus 9.1e-25
Foxj2
forkhead box J2
gene from Rattus norvegicus 9.1e-25
FOXJ2
Uncharacterized protein
protein from Gallus gallus 1.0e-24
FOXJ2
Uncharacterized protein
protein from Bos taurus 1.1e-24
Foxi1
forkhead box I1
protein from Mus musculus 1.6e-24
Ci-FoxG
Transcription factor protein
protein from Ciona intestinalis 2.1e-24
foxi1
forkhead box i1
gene_product from Danio rerio 2.4e-24
foxi1e
Forkhead box protein I1-ema
protein from Xenopus (Silurana) tropicalis 2.6e-24
foxi1e
Forkhead box protein I1-ema
protein from Xenopus laevis 2.6e-24
Foxi1
forkhead box I1
gene from Rattus norvegicus 2.6e-24
Ci-FoxI-c
Transcription factor protein
protein from Ciona intestinalis 2.7e-24
FOXI3
Forkhead box protein I3
protein from Canis lupus familiaris 4.2e-24
Foxc2
forkhead box C2
protein from Mus musculus 4.4e-24
FOXI3
Forkhead box protein I3
protein from Canis lupus familiaris 5.3e-24
foxi3b
forkhead box I3b
gene_product from Danio rerio 5.3e-24
FOXI3
Uncharacterized protein
protein from Bos taurus 5.4e-24
FOXI3
Forkhead box protein I3
protein from Homo sapiens 5.6e-24
foxc2-a
Forkhead box protein C2-A
protein from Xenopus laevis 5.7e-24
foxc2-b
Forkhead box protein C2-B
protein from Xenopus laevis 6.7e-24
foxc2
Forkhead box protein C2
protein from Xenopus (Silurana) tropicalis 7.3e-24
FOXI3
Forkhead box protein I3
protein from Canis lupus familiaris 7.6e-24
FoxJ1
Forkhead transcription factor J1
protein from Strongylocentrotus purpuratus 8.6e-24
FOXI2
Uncharacterized protein
protein from Bos taurus 8.7e-24
FOXI1
Uncharacterized protein
protein from Bos taurus 8.7e-24
FOXI1
Uncharacterized protein
protein from Canis lupus familiaris 8.7e-24
FOXI1
Forkhead box protein I1
protein from Homo sapiens 8.7e-24
FOXI1
Uncharacterized protein
protein from Sus scrofa 8.7e-24
Foxi3
forkhead box I3
gene from Rattus norvegicus 8.7e-24
foxi2
Forkhead box protein I2
protein from Xenopus (Silurana) tropicalis 1.1e-23
foxi2
forkhead box I2
gene_product from Danio rerio 1.1e-23
foxc1a
forkhead box C1a
gene_product from Danio rerio 1.3e-23
foxd2
forkhead box D2
gene_product from Danio rerio 1.3e-23
FOXI2
Forkhead box protein I2
protein from Homo sapiens 1.8e-23
LOC100157475
Uncharacterized protein
protein from Sus scrofa 1.8e-23
foxi2-a
Forkhead box protein I2-A
protein from Xenopus laevis 1.8e-23
foxg1b
forkhead box G1b
gene_product from Danio rerio 1.8e-23
FOXG1
Forkhead box protein G1
protein from Gallus gallus 2.2e-23
foxi2-b
Forkhead box protein I2-B
protein from Xenopus laevis 2.3e-23
foxg1c
forkhead box G1c
gene_product from Danio rerio 2.3e-23
foxg1a
forkhead box G1a
gene_product from Danio rerio 2.9e-23
foxi1-b
Forkhead box protein I1-B
protein from Xenopus laevis 2.9e-23
FOXL1
Uncharacterized protein
protein from Bos taurus 3.8e-23
FOXI2
Uncharacterized protein
protein from Canis lupus familiaris 3.8e-23
Foxi2
forkhead box I2
gene from Rattus norvegicus 3.8e-23
Foxi2
Forkhead box protein I2
protein from Rattus norvegicus 3.8e-23
foxg1
Forkhead box protein G1
protein from Xenopus laevis 3.8e-23
foxc1-a
Forkhead box protein C1-A
protein from Xenopus laevis 4.0e-23
FOXG1
Forkhead box protein G1
protein from Gallus gallus 4.6e-23
Foxi2
forkhead box I2
protein from Mus musculus 4.8e-23
foxg1d
forkhead box G1d
gene_product from Danio rerio 4.8e-23
FOXJ3
Forkhead box protein J3
protein from Homo sapiens 6.1e-23
FOXL1
Forkhead box protein L1
protein from Homo sapiens 6.1e-23
foxi1
Forkhead box protein I1
protein from Xenopus (Silurana) tropicalis 6.1e-23
foxi1-a
Forkhead box protein I1-A
protein from Xenopus laevis 6.1e-23
Foxg1
forkhead box G1
gene from Rattus norvegicus 6.2e-23
Foxg1
forkhead box G1
protein from Mus musculus 6.2e-23
FOXG1
Forkhead box protein G1
protein from Homo sapiens 6.7e-23
Foxl1
forkhead box L1
protein from Mus musculus 1.0e-22
slp1
sloppy paired 1
protein from Drosophila melanogaster 1.3e-22
foxj1.2
Forkhead box protein J1.2
protein from Xenopus (Silurana) tropicalis 1.3e-22
AN8858.2
Putative forkhead transcription factor (Eurofung)
protein from Aspergillus nidulans FGSC A4 1.3e-22
B3FNS2
FoxG
protein from Strongylocentrotus purpuratus 1.6e-22
foxc1b
forkhead box C1b
gene_product from Danio rerio 1.6e-22
foxd2
Forkhead box protein D2
protein from Xenopus laevis 1.8e-22
foxj1.2
Forkhead box protein J1.2
protein from Xenopus laevis 2.1e-22
Ci-FoxI-b
Transcription factor protein
protein from Ciona intestinalis 2.5e-22
FOXC2
Forkhead box protein C2
protein from Homo sapiens 3.3e-22
FOXC2
Uncharacterized protein
protein from Bos taurus 3.4e-22
Foxc2
forkhead box C2
gene from Rattus norvegicus 3.4e-22
foxi3a
forkhead box I3a
gene_product from Danio rerio 3.4e-22
FOXC2
Uncharacterized protein
protein from Canis lupus familiaris 3.4e-22
FOXC2
Uncharacterized protein
protein from Gallus gallus 4.2e-22
FOXL1
Uncharacterized protein
protein from Canis lupus familiaris 4.3e-22
foxc1
Forkhead box protein C1
protein from Xenopus (Silurana) tropicalis 5.3e-22
FoxA
Uncharacterized protein
protein from Strongylocentrotus purpuratus 5.4e-22
LOC100511634
Uncharacterized protein
protein from Sus scrofa 5.5e-22
fkh-2 gene from Caenorhabditis elegans 5.5e-22
fkh-2
Protein FKH-2, isoform a
protein from Caenorhabditis elegans 5.5e-22
slp2
sloppy paired 2
protein from Drosophila melanogaster 7.4e-22
foxc1-b
Forkhead box protein C1-B
protein from Xenopus laevis 8.8e-22

The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy14921
        (148 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|Q2V894 - symbol:FoxJ2 "Forkhead transcription f...   346  1.6e-31   1
UNIPROTKB|F1M3L2 - symbol:Foxj3 "Protein Foxj3" species:1...   344  1.2e-30   1
MGI|MGI:2443432 - symbol:Foxj3 "forkhead box J3" species:...   344  1.2e-30   1
UNIPROTKB|E1BK17 - symbol:FOXJ3 "Uncharacterized protein"...   343  1.4e-30   1
UNIPROTKB|E2R0F1 - symbol:FOXJ3 "Uncharacterized protein"...   343  1.6e-30   1
UNIPROTKB|Q9UPW0 - symbol:FOXJ3 "Forkhead box protein J3"...   342  2.0e-30   1
UNIPROTKB|C9JVP0 - symbol:FOXJ3 "Forkhead box protein J3"...   335  2.3e-30   1
RGD|1311770 - symbol:Foxj3 "forkhead box J3" species:1011...   337  5.6e-30   1
UNIPROTKB|Q28EM1 - symbol:foxj2 "Forkhead box protein J2"...   311  2.2e-27   1
UNIPROTKB|Q4H3I3 - symbol:Ci-FoxJ2 "Transcription factor ...   300  3.2e-27   2
UNIPROTKB|Q68EZ2 - symbol:foxj2 "Forkhead box protein J2"...   308  4.8e-27   1
UNIPROTKB|Q8JIT5 - symbol:foxi1c "Forkhead box protein I1...   281  5.8e-27   2
UNIPROTKB|Q28D67 - symbol:foxi1c "Forkhead box protein I1...   280  7.4e-27   2
UNIPROTKB|E1BR13 - symbol:FOXI1 "Uncharacterized protein"...   275  5.1e-26   2
UNIPROTKB|F1NK07 - symbol:F1NK07 "Uncharacterized protein...   270  6.4e-26   2
UNIPROTKB|E2R126 - symbol:FOXJ2 "Uncharacterized protein"...   291  5.7e-25   1
ZFIN|ZDB-GENE-100922-240 - symbol:foxj2 "forkhead box J2"...   289  6.5e-25   1
UNIPROTKB|Q9P0K8 - symbol:FOXJ2 "Forkhead box protein J2"...   290  7.4e-25   1
MGI|MGI:1926805 - symbol:Foxj2 "forkhead box J2" species:...   289  9.1e-25   1
RGD|1565101 - symbol:Foxj2 "forkhead box J2" species:1011...   289  9.1e-25   1
UNIPROTKB|E1BTL6 - symbol:FOXJ2 "Uncharacterized protein"...   288  1.0e-24   1
UNIPROTKB|E1B8C0 - symbol:FOXJ2 "Uncharacterized protein"...   288  1.1e-24   1
MGI|MGI:1096329 - symbol:Foxi1 "forkhead box I1" species:...   280  1.6e-24   1
UNIPROTKB|Q4H3I9 - symbol:Ci-FoxG "Transcription factor p...   266  2.1e-24   2
ZFIN|ZDB-GENE-030505-1 - symbol:foxi1 "forkhead box i1" s...   279  2.4e-24   1
UNIPROTKB|Q6P8A3 - symbol:foxi1e "Forkhead box protein I1...   278  2.6e-24   1
UNIPROTKB|Q7ZYQ0 - symbol:foxi1e "Forkhead box protein I1...   278  2.6e-24   1
RGD|1307421 - symbol:Foxi1 "forkhead box I1" species:1011...   278  2.6e-24   1
UNIPROTKB|Q4H3I4 - symbol:Ci-FoxI-c "Transcription factor...   285  2.7e-24   1
UNIPROTKB|J9PB84 - symbol:FOXI3 "Forkhead box protein I3"...   276  4.2e-24   1
MGI|MGI:1347481 - symbol:Foxc2 "forkhead box C2" species:...   264  4.4e-24   2
UNIPROTKB|J9P6N9 - symbol:FOXI3 "Forkhead box protein I3"...   276  5.3e-24   1
ZFIN|ZDB-GENE-031126-4 - symbol:foxi3b "forkhead box I3b"...   275  5.3e-24   1
UNIPROTKB|F1MC99 - symbol:FOXI3 "Uncharacterized protein"...   276  5.4e-24   1
UNIPROTKB|A8MTJ6 - symbol:FOXI3 "Forkhead box protein I3"...   276  5.6e-24   1
UNIPROTKB|Q9PVY9 - symbol:foxc2-a "Forkhead box protein C...   263  5.7e-24   2
UNIPROTKB|Q9PVY8 - symbol:foxc2-b "Forkhead box protein C...   263  6.7e-24   2
UNIPROTKB|Q6NVT7 - symbol:foxc2 "Forkhead box protein C2"...   262  7.3e-24   2
UNIPROTKB|B5RHS5 - symbol:FOXI3 "Forkhead box protein I3"...   276  7.6e-24   1
UNIPROTKB|Q2V889 - symbol:FoxJ1 "Forkhead transcription f...   258  8.6e-24   2
UNIPROTKB|E1BN87 - symbol:FOXI2 "Uncharacterized protein"...   273  8.7e-24   1
UNIPROTKB|E1BPY1 - symbol:FOXI1 "Uncharacterized protein"...   273  8.7e-24   1
UNIPROTKB|E2RRX4 - symbol:FOXI1 "Uncharacterized protein"...   273  8.7e-24   1
UNIPROTKB|Q12951 - symbol:FOXI1 "Forkhead box protein I1"...   273  8.7e-24   1
UNIPROTKB|F1RR95 - symbol:FOXI1 "Uncharacterized protein"...   273  8.7e-24   1
RGD|1561816 - symbol:Foxi3 "forkhead box I3" species:1011...   273  8.7e-24   1
UNIPROTKB|Q28HT3 - symbol:foxi2 "Forkhead box protein I2"...   272  1.1e-23   1
ZFIN|ZDB-GENE-031126-2 - symbol:foxi2 "forkhead box I2" s...   272  1.1e-23   1
ZFIN|ZDB-GENE-010302-1 - symbol:foxc1a "forkhead box C1a"...   257  1.3e-23   2
ZFIN|ZDB-GENE-980605-6 - symbol:foxd2 "forkhead box D2" s...   244  1.3e-23   2
UNIPROTKB|Q6ZQN5 - symbol:FOXI2 "Forkhead box protein I2"...   270  1.8e-23   1
UNIPROTKB|F1SDK7 - symbol:FOXI2 "Uncharacterized protein"...   270  1.8e-23   1
UNIPROTKB|Q5NDM2 - symbol:foxi2-a "Forkhead box protein I...   270  1.8e-23   1
ZFIN|ZDB-GENE-040426-2437 - symbol:foxg1b "forkhead box G...   270  1.8e-23   1
UNIPROTKB|F1NP93 - symbol:FOXG1 "Forkhead box protein G1"...   270  2.2e-23   1
UNIPROTKB|Q63ZH2 - symbol:foxi2-b "Forkhead box protein I...   269  2.3e-23   1
ZFIN|ZDB-GENE-050419-26 - symbol:foxg1c "forkhead box G1c...   269  2.3e-23   1
ZFIN|ZDB-GENE-990415-267 - symbol:foxg1a "forkhead box G1...   270  2.9e-23   1
UNIPROTKB|Q91905 - symbol:foxi1-b "Forkhead box protein I...   268  2.9e-23   1
UNIPROTKB|F1ME43 - symbol:FOXL1 "Uncharacterized protein"...   267  3.8e-23   1
UNIPROTKB|F1P7X0 - symbol:FOXI2 "Uncharacterized protein"...   267  3.8e-23   1
RGD|621739 - symbol:Foxi2 "forkhead box I2" species:10116...   267  3.8e-23   1
UNIPROTKB|Q63248 - symbol:Foxi2 "Forkhead box protein I2"...   267  3.8e-23   1
UNIPROTKB|Q9YHC5 - symbol:foxg1 "Forkhead box protein G1"...   270  3.8e-23   1
UNIPROTKB|Q9PVZ3 - symbol:foxc1-a "Forkhead box protein C...   260  4.0e-23   2
UNIPROTKB|Q90964 - symbol:FOXG1 "Forkhead box protein G1"...   270  4.6e-23   1
MGI|MGI:3028075 - symbol:Foxi2 "forkhead box I2" species:...   266  4.8e-23   1
ZFIN|ZDB-GENE-080305-12 - symbol:zgc:175247 "zgc:175247" ...   266  4.8e-23   1
UNIPROTKB|H7C1Y6 - symbol:FOXJ3 "Forkhead box protein J3"...   265  6.1e-23   1
UNIPROTKB|Q12952 - symbol:FOXL1 "Forkhead box protein L1"...   265  6.1e-23   1
UNIPROTKB|Q6P2Z3 - symbol:foxi1 "Forkhead box protein I1"...   265  6.1e-23   1
UNIPROTKB|Q91904 - symbol:foxi1-a "Forkhead box protein I...   265  6.1e-23   1
RGD|2619 - symbol:Foxg1 "forkhead box G1" species:10116 "...   270  6.2e-23   1
MGI|MGI:1347464 - symbol:Foxg1 "forkhead box G1" species:...   270  6.2e-23   1
UNIPROTKB|P55316 - symbol:FOXG1 "Forkhead box protein G1"...   270  6.7e-23   1
MGI|MGI:1347469 - symbol:Foxl1 "forkhead box L1" species:...   263  1.0e-22   1
FB|FBgn0003430 - symbol:slp1 "sloppy paired 1" species:72...   262  1.3e-22   1
UNIPROTKB|Q66IG8 - symbol:foxj1.2 "Forkhead box protein J...   262  1.3e-22   1
ASPGD|ASPL0000072747 - symbol:mcnB species:162425 "Emeric...   259  1.3e-22   2
UNIPROTKB|Q5AS72 - symbol:AN8858.2 "Putative forkhead tra...   259  1.3e-22   2
UNIPROTKB|B3FNS2 - symbol:B3FNS2 "FoxG" species:7668 "Str...   267  1.6e-22   1
ZFIN|ZDB-GENE-010302-2 - symbol:foxc1b "forkhead box C1b"...   249  1.6e-22   2
UNIPROTKB|Q90WN4 - symbol:foxd2 "Forkhead box protein D2"...   241  1.8e-22   2
UNIPROTKB|Q32NH9 - symbol:foxj1.2 "Forkhead box protein J...   260  2.1e-22   1
UNIPROTKB|Q4H3I5 - symbol:Ci-FoxI-b "Transcription factor...   264  2.5e-22   1
UNIPROTKB|Q99958 - symbol:FOXC2 "Forkhead box protein C2"...   264  3.3e-22   1
UNIPROTKB|F1NK01 - symbol:Gga.51501 "Uncharacterized prot...   262  3.4e-22   1
UNIPROTKB|F1MVT0 - symbol:FOXC2 "Uncharacterized protein"...   264  3.4e-22   1
RGD|621703 - symbol:Foxc2 "forkhead box C2" species:10116...   258  3.4e-22   1
ZFIN|ZDB-GENE-031126-3 - symbol:foxi3a "forkhead box I3a"...   258  3.4e-22   1
UNIPROTKB|E2QSH3 - symbol:FOXC2 "Uncharacterized protein"...   264  3.4e-22   1
UNIPROTKB|F1NK00 - symbol:Gga.51501 "Uncharacterized prot...   262  4.2e-22   1
UNIPROTKB|E2QSH5 - symbol:FOXL1 "Uncharacterized protein"...   257  4.3e-22   1
UNIPROTKB|Q68F77 - symbol:foxc1 "Forkhead box protein C1"...   262  5.3e-22   1
UNIPROTKB|Q1PA44 - symbol:FoxA "Uncharacterized protein" ...   245  5.4e-22   2
UNIPROTKB|F1S6I8 - symbol:FOXL1 "Uncharacterized protein"...   256  5.5e-22   1
WB|WBGene00001434 - symbol:fkh-2 species:6239 "Caenorhabd...   256  5.5e-22   1
UNIPROTKB|Q22510 - symbol:fkh-2 "Protein FKH-2, isoform a...   256  5.5e-22   1
FB|FBgn0004567 - symbol:slp2 "sloppy paired 2" species:72...   259  7.4e-22   1
UNIPROTKB|Q32NP8 - symbol:foxc1-b "Forkhead box protein C...   260  8.8e-22   1

WARNING:  Descriptions of 501 database sequences were not reported due to the
          limiting value of parameter V = 100.


>UNIPROTKB|Q2V894 [details] [associations]
            symbol:FoxJ2 "Forkhead transcription factor J2"
            species:7668 "Strongylocentrotus purpuratus" [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0019904 "protein
            domain specific binding" evidence=IBA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IBA]
            [GO:0048513 "organ development" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0019904 GO:GO:0045893
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0051090 GO:GO:0048513
            eggNOG:COG5025 GO:GO:0009888 CTD:55810 KO:K09403 EMBL:DQ286737
            RefSeq:NP_001073017.1 UniGene:Spu.15552 ProteinModelPortal:Q2V894
            SMR:Q2V894 GeneID:587514 KEGG:spu:587514 Uniprot:Q2V894
        Length = 483

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 67/100 (67%), Positives = 79/100 (79%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA+LI  AI+++P+ +MTL+EIYQ+I   FPYYREA  GWKNSIRHNLSLNKCF KV R
Sbjct:    67 SYANLITFAINSSPKKKMTLSEIYQWICENFPYYREAGNGWKNSIRHNLSLNKCFMKVPR 126

Query:    75 PKDDPGKGSYWAIDYNHTADDGPSKKKVKLPRVSPYSPVE 114
              KDDPGKGSYWAID N+  DD   KK+ + P +SPYSP E
Sbjct:   127 SKDDPGKGSYWAID-NNPQDDSLRKKR-RHPGMSPYSPEE 164


>UNIPROTKB|F1M3L2 [details] [associations]
            symbol:Foxj3 "Protein Foxj3" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 RGD:1311770 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104094 IPI:IPI00568727
            Ensembl:ENSRNOT00000011683 ArrayExpress:F1M3L2 Uniprot:F1M3L2
        Length = 621

 Score = 344 (126.2 bits), Expect = 1.2e-30, P = 1.2e-30
 Identities = 73/135 (54%), Positives = 94/135 (69%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYASLI  AI+++P+ +MTL+EIYQ+I   FPYYREA +GWKNSIRHNLSLNKCF KV R
Sbjct:    81 SYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFLKVPR 140

Query:    75 PKDDPGKGSYWAIDYNHTADDGPS--KKKVK-LPRVS-PYSPVECXXXXXXXDVHNSKPP 130
              KDDPGKGSYWAID N   D  P+  KK+ + + R S PYS ++         +  S  P
Sbjct:   141 SKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSVERASTPYS-IDSDSLGMECIISGSASP 199

Query:   131 T-SISSVPNTVSFFS 144
             T +I++V N V+ ++
Sbjct:   200 TLAINTVTNKVTLYN 214


>MGI|MGI:2443432 [details] [associations]
            symbol:Foxj3 "forkhead box J3" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0019904 "protein domain specific
            binding" evidence=IBA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:2443432 GO:GO:0019904 GO:GO:0045893 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0051090 GO:GO:0048513
            eggNOG:COG5025 GO:GO:0009888 GeneTree:ENSGT00700000104094
            HOGENOM:HOG000231184 HOVERGEN:HBG051648 KO:K09403 CTD:22887
            OMA:MSQQHMM OrthoDB:EOG4MCX01 EMBL:AK082840 EMBL:AK129271
            EMBL:AK139508 EMBL:AL645563 EMBL:BC058231 IPI:IPI00225578
            IPI:IPI00417077 RefSeq:NP_766287.1 UniGene:Mm.259227
            ProteinModelPortal:Q8BUR3 SMR:Q8BUR3 STRING:Q8BUR3
            PhosphoSite:Q8BUR3 PRIDE:Q8BUR3 Ensembl:ENSMUST00000044564
            Ensembl:ENSMUST00000106310 GeneID:230700 KEGG:mmu:230700
            UCSC:uc008umt.1 UCSC:uc008umu.1 InParanoid:A2AA37 NextBio:380061
            Bgee:Q8BUR3 CleanEx:MM_FOXJ3 Genevestigator:Q8BUR3
            GermOnline:ENSMUSG00000032998 Uniprot:Q8BUR3
        Length = 623

 Score = 344 (126.2 bits), Expect = 1.2e-30, P = 1.2e-30
 Identities = 73/135 (54%), Positives = 94/135 (69%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYASLI  AI+++P+ +MTL+EIYQ+I   FPYYREA +GWKNSIRHNLSLNKCF KV R
Sbjct:    82 SYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFLKVPR 141

Query:    75 PKDDPGKGSYWAIDYNHTADDGPS--KKKVK-LPRVS-PYSPVECXXXXXXXDVHNSKPP 130
              KDDPGKGSYWAID N   D  P+  KK+ + + R S PYS ++         +  S  P
Sbjct:   142 SKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSVERASTPYS-IDSDSLGMECIISGSASP 200

Query:   131 T-SISSVPNTVSFFS 144
             T +I++V N V+ ++
Sbjct:   201 TLAINTVTNKVTLYN 215


>UNIPROTKB|E1BK17 [details] [associations]
            symbol:FOXJ3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104094
            OMA:MSQQHMM EMBL:DAAA02009082 EMBL:DAAA02009083 IPI:IPI00924244
            Ensembl:ENSBTAT00000060940 Uniprot:E1BK17
        Length = 610

 Score = 343 (125.8 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 73/135 (54%), Positives = 94/135 (69%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYASLI  AI+++P+ +MTL+EIYQ+I   FPYYREA +GWKNSIRHNLSLNKCF KV R
Sbjct:    67 SYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFLKVPR 126

Query:    75 PKDDPGKGSYWAIDYNHTADDGPS--KKKVK-LPRVS-PYSPVECXXXXXXXDVHNSKPP 130
              KDDPGKGSYWAID N   D  P+  KK+ + + R S PYS ++         +  S  P
Sbjct:   127 SKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERASTPYS-IDSDSLGMECIISGSASP 185

Query:   131 T-SISSVPNTVSFFS 144
             T +I++V N V+ ++
Sbjct:   186 TLAINTVTNKVTLYN 200


>UNIPROTKB|E2R0F1 [details] [associations]
            symbol:FOXJ3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104094 OMA:MSQQHMM EMBL:AAEX03009529
            EMBL:AAEX03009528 ProteinModelPortal:E2R0F1
            Ensembl:ENSCAFT00000004039 Uniprot:E2R0F1
        Length = 622

 Score = 343 (125.8 bits), Expect = 1.6e-30, P = 1.6e-30
 Identities = 73/135 (54%), Positives = 94/135 (69%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYASLI  AI+++P+ +MTL+EIYQ+I   FPYYREA +GWKNSIRHNLSLNKCF KV R
Sbjct:    82 SYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFLKVPR 141

Query:    75 PKDDPGKGSYWAIDYNHTADDGPS--KKKVK-LPRVS-PYSPVECXXXXXXXDVHNSKPP 130
              KDDPGKGSYWAID N   D  P+  KK+ + + R S PYS ++         +  S  P
Sbjct:   142 SKDDPGKGSYWAIDTNPKEDALPTRPKKRARSVERASTPYS-IDSDSLGMECIISGSASP 200

Query:   131 T-SISSVPNTVSFFS 144
             T +I++V N V+ ++
Sbjct:   201 TLAINTVTNKVTLYN 215


>UNIPROTKB|Q9UPW0 [details] [associations]
            symbol:FOXJ3 "Forkhead box protein J3" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0019904 "protein
            domain specific binding" evidence=IBA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IBA]
            [GO:0048513 "organ development" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0019904 GO:GO:0045893
            EMBL:CH471059 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 eggNOG:COG5025 GO:GO:0009888 HOGENOM:HOG000231184
            HOVERGEN:HBG051648 KO:K09403 EMBL:AB028964 EMBL:AC096540
            EMBL:AC114492 EMBL:BC014182 EMBL:BC151828 EMBL:BC152441
            EMBL:AL157422 IPI:IPI00010426 IPI:IPI00414683 PIR:T46900
            RefSeq:NP_001185779.1 RefSeq:NP_001185780.1 RefSeq:NP_001185781.1
            RefSeq:NP_055762.3 UniGene:Hs.26023 ProteinModelPortal:Q9UPW0
            SMR:Q9UPW0 IntAct:Q9UPW0 STRING:Q9UPW0 PhosphoSite:Q9UPW0
            DMDM:296434510 PRIDE:Q9UPW0 DNASU:22887 Ensembl:ENST00000361346
            Ensembl:ENST00000361776 Ensembl:ENST00000372572
            Ensembl:ENST00000372573 Ensembl:ENST00000545068 GeneID:22887
            KEGG:hsa:22887 UCSC:uc001che.3 UCSC:uc001chh.2 CTD:22887
            GeneCards:GC01M042642 HGNC:HGNC:29178 neXtProt:NX_Q9UPW0
            PharmGKB:PA134945417 InParanoid:Q9UPW0 OMA:MSQQHMM
            OrthoDB:EOG4MCX01 PhylomeDB:Q9UPW0 ChiTaRS:FOXJ3 GenomeRNAi:22887
            NextBio:43479 ArrayExpress:Q9UPW0 Bgee:Q9UPW0 CleanEx:HS_FOXJ3
            Genevestigator:Q9UPW0 GermOnline:ENSG00000198815 Uniprot:Q9UPW0
        Length = 622

 Score = 342 (125.4 bits), Expect = 2.0e-30, P = 2.0e-30
 Identities = 73/135 (54%), Positives = 94/135 (69%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYASLI  AI+++P+ +MTL+EIYQ+I   FPYYREA +GWKNSIRHNLSLNKCF KV R
Sbjct:    82 SYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFLKVPR 141

Query:    75 PKDDPGKGSYWAIDYNHTADDGPS--KKKVK-LPRVS-PYSPVECXXXXXXXDVHNSKPP 130
              KDDPGKGSYWAID N   D  P+  KK+ + + R S PYS ++         +  S  P
Sbjct:   142 SKDDPGKGSYWAIDTNPKEDVLPTRPKKRARSVERASTPYS-IDSDSLGMECIISGSASP 200

Query:   131 T-SISSVPNTVSFFS 144
             T +I++V N V+ ++
Sbjct:   201 TLAINTVTNKVTLYN 215


>UNIPROTKB|C9JVP0 [details] [associations]
            symbol:FOXJ3 "Forkhead box protein J3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 EMBL:CH471059 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            HOGENOM:HOG000231184 EMBL:AC096540 EMBL:AC114492 IPI:IPI00414683
            UniGene:Hs.26023 HGNC:HGNC:29178 ChiTaRS:FOXJ3 SMR:C9JVP0
            STRING:C9JVP0 Ensembl:ENST00000445886 Uniprot:C9JVP0
        Length = 382

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 69/125 (55%), Positives = 88/125 (70%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYASLI  AI+++P+ +MTL+EIYQ+I   FPYYREA +GWKNSIRHNLSLNKCF KV R
Sbjct:    82 SYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFLKVPR 141

Query:    75 PKDDPGKGSYWAIDYNHTADDGPS--KKKVK-LPRVSPYSPVECXXXXXXXDVHNSKPPT 131
              KDDPGKGSYWAID N   D  P+  KK+ + + RV+ Y+  +         ++NS    
Sbjct:   142 SKDDPGKGSYWAIDTNPKEDVLPTRPKKRARSVERVTLYNTDQDGSDSPRSSLNNSLSDQ 201

Query:   132 SISSV 136
             S++SV
Sbjct:   202 SLASV 206


>RGD|1311770 [details] [associations]
            symbol:Foxj3 "forkhead box J3" species:10116 "Rattus norvegicus"
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0019904 "protein
            domain specific binding" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IBA]
            [GO:0048513 "organ development" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:1311770 GO:GO:0019904
            GO:GO:0045893 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 GO:GO:0009888 IPI:IPI00359077
            Ensembl:ENSRNOT00000041401 UCSC:RGD:1311770 ArrayExpress:F1M9U9
            Uniprot:F1M9U9
        Length = 587

 Score = 337 (123.7 bits), Expect = 5.6e-30, P = 5.6e-30
 Identities = 69/125 (55%), Positives = 88/125 (70%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYASLI  AI+++P+ +MTL+EIYQ+I   FPYYREA +GWKNSIRHNLSLNKCF KV R
Sbjct:    81 SYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFLKVPR 140

Query:    75 PKDDPGKGSYWAIDYNHTADDGPS--KKKVK-LPRVSPYSPVECXXXXXXXDVHNSKPPT 131
              KDDPGKGSYWAID N   D  P+  KK+ + + RV+ Y+  +         ++NS    
Sbjct:   141 SKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSVERVTLYNTDQDGSDSPRSSLNNSLSDQ 200

Query:   132 SISSV 136
             S++SV
Sbjct:   201 SLASV 205


>UNIPROTKB|Q28EM1 [details] [associations]
            symbol:foxj2 "Forkhead box protein J2" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0043565 "sequence-specific DNA
            binding" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 eggNOG:COG5025 HSSP:Q01167
            GeneTree:ENSGT00700000104094 CTD:55810 HOGENOM:HOG000231184
            HOVERGEN:HBG051648 KO:K09403 OrthoDB:EOG473PR7 EMBL:CR848176
            EMBL:BC074713 RefSeq:NP_001005675.2 UniGene:Str.24177
            ProteinModelPortal:Q28EM1 SMR:Q28EM1 STRING:Q28EM1
            Ensembl:ENSXETT00000028887 GeneID:448174 KEGG:xtr:448174
            Xenbase:XB-GENE-483646 InParanoid:Q6GL06 OMA:INSAPAK Bgee:Q28EM1
            Uniprot:Q28EM1
        Length = 512

 Score = 311 (114.5 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 69/123 (56%), Positives = 79/123 (64%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA+LI+ AI++AP  RMTL+EIY++I   FPYYR A  GWKNSIRHNLSLNKCF KV R
Sbjct:    63 SYANLIQYAINSAPAKRMTLSEIYRWICDNFPYYRNAGVGWKNSIRHNLSLNKCFRKVPR 122

Query:    75 PKDDPGKGSYWAIDYNHTADDGPSKKKVKLPRVS-PYSPVECXXXXXXXDVHNSKPPTSI 133
             P+DDPGKGSYW ID        P K+ V LPR   P+   E        DV N  P  S 
Sbjct:   123 PRDDPGKGSYWMID------SCP-KEDVALPRRKRPHPDDEVSQDSFEQDV-NKSPLRSA 174

Query:   134 SSV 136
             S V
Sbjct:   175 SEV 177


>UNIPROTKB|Q4H3I3 [details] [associations]
            symbol:Ci-FoxJ2 "Transcription factor protein" species:7719
            "Ciona intestinalis" [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0019904 "protein domain specific
            binding" evidence=IBA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IBA] [GO:0048513 "organ
            development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0019904 GO:GO:0045893 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0048513 eggNOG:COG5025
            GO:GO:0009888 CTD:55810 HOGENOM:HOG000231184 KO:K09403
            EMBL:AB210439 RefSeq:NP_001071714.1 UniGene:Cin.31124
            ProteinModelPortal:Q4H3I3 SMR:Q4H3I3 GeneID:778617 KEGG:cin:778617
            InParanoid:Q4H3I3 Uniprot:Q4H3I3
        Length = 560

 Score = 300 (110.7 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
 Identities = 57/80 (71%), Positives = 64/80 (80%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYASLI LAI+++ + +MTL+EIYQ+I  TFPYY  A  GWKNSIRHNLSLNKCF KV R
Sbjct:    80 SYASLISLAINSSNEKKMTLSEIYQWICKTFPYYSGAGTGWKNSIRHNLSLNKCFMKVPR 139

Query:    75 PKDDPGKGSYWAIDYNHTAD 94
              KDDPGKGSYWAID N   D
Sbjct:   140 AKDDPGKGSYWAIDSNPQED 159

 Score = 33 (16.7 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
 Identities = 6/19 (31%), Positives = 12/19 (63%)

Query:   123 DVHNSKPPTSISSVPNTVS 141
             +VHN++ P   S+  N ++
Sbjct:   352 NVHNTEHPLGHSATLNQIN 370


>UNIPROTKB|Q68EZ2 [details] [associations]
            symbol:foxj2 "Forkhead box protein J2" species:8355
            "Xenopus laevis" [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0045893
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 HSSP:Q99958 CTD:55810 HOVERGEN:HBG051648 KO:K09403
            EMBL:BC080056 RefSeq:NP_001087521.1 UniGene:Xl.48692
            ProteinModelPortal:Q68EZ2 SMR:Q68EZ2 GeneID:447345 KEGG:xla:447345
            Xenbase:XB-GENE-865002 Uniprot:Q68EZ2
        Length = 512

 Score = 308 (113.5 bits), Expect = 4.8e-27, P = 4.8e-27
 Identities = 67/123 (54%), Positives = 80/123 (65%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA+LI+ AI++AP  RMTL+EIY++I   FPYYR A  GWKNSIRHNLSLNKCF KV R
Sbjct:    63 SYANLIQYAINSAPAKRMTLSEIYRWICDNFPYYRSAGVGWKNSIRHNLSLNKCFRKVPR 122

Query:    75 PKDDPGKGSYWAIDYNHTADDGPSKKKVKLPRVS-PYSPVECXXXXXXXDVHNSKPPTSI 133
             P+DDPGKGSYW ID        P K+ + LPR   P+   E        +V N  P +S 
Sbjct:   123 PRDDPGKGSYWMID------SCP-KEDITLPRRKRPHPDDEVSQDSFEQEV-NKSPLSSA 174

Query:   134 SSV 136
             S V
Sbjct:   175 SEV 177


>UNIPROTKB|Q8JIT5 [details] [associations]
            symbol:foxi1c "Forkhead box protein I1c" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 HSSP:Q99958
            HOVERGEN:HBG067944 KO:K09401 EMBL:AJ487620 RefSeq:NP_001091120.1
            UniGene:Xl.43219 ProteinModelPortal:Q8JIT5 SMR:Q8JIT5 GeneID:446212
            KEGG:xla:446212 CTD:446212 Xenbase:XB-GENE-5996119 Uniprot:Q8JIT5
        Length = 381

 Score = 281 (104.0 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
 Identities = 49/91 (53%), Positives = 69/91 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI NAP+ ++TL++IYQ++   FP+Y+ + AGW+NSIRHNLSLN CF KV R
Sbjct:   133 SYSALIAMAIQNAPEKKLTLSQIYQYVAENFPFYKRSKAGWQNSIRHNLSLNDCFKKVPR 192

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   193 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 223

 Score = 37 (18.1 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query:   123 DVHNSKPPTSISSVPNTVSFFS 144
             D   S  P+ I+S P   +FFS
Sbjct:   268 DDRKSTSPSGITSSPCLNNFFS 289


>UNIPROTKB|Q28D67 [details] [associations]
            symbol:foxi1c "Forkhead box protein I1c" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045893 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            eggNOG:COG5025 HSSP:Q01167 HOGENOM:HOG000236333 HOVERGEN:HBG067944
            KO:K09401 CTD:446212 EMBL:CR855676 RefSeq:NP_001016787.1
            UniGene:Str.27482 ProteinModelPortal:Q28D67 SMR:Q28D67
            STRING:Q28D67 GeneID:549541 KEGG:xtr:549541 Xenbase:XB-GENE-5996107
            Uniprot:Q28D67
        Length = 358

 Score = 280 (103.6 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
 Identities = 49/91 (53%), Positives = 69/91 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI NAP+ ++TL++IYQ++   FP+Y+ + AGW+NSIRHNLSLN CF KV R
Sbjct:   110 SYSALIAMAIQNAPEKKLTLSQIYQYVADNFPFYKRSKAGWQNSIRHNLSLNDCFKKVPR 169

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   170 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 200

 Score = 37 (18.1 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query:   123 DVHNSKPPTSISSVPNTVSFFS 144
             D   S  P+ I+S P   +FFS
Sbjct:   245 DGRKSTSPSGITSSPCLNNFFS 266


>UNIPROTKB|E1BR13 [details] [associations]
            symbol:FOXI1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0044212
            GeneTree:ENSGT00690000101636 CTD:2299 KO:K09401 OMA:QAYGVQR
            EMBL:AADN02035926 IPI:IPI00594856 RefSeq:XP_425185.1
            Ensembl:ENSGALT00000003284 GeneID:427613 KEGG:gga:427613
            NextBio:20828832 Uniprot:E1BR13
        Length = 375

 Score = 275 (101.9 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
 Identities = 49/91 (53%), Positives = 68/91 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI  AP+ R+TL++IYQ++   FP+Y ++ AGW+NSIRHNLSLN CF KV R
Sbjct:   127 SYSALIAMAIHGAPEKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPR 186

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   187 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 217

 Score = 34 (17.0 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
 Identities = 8/38 (21%), Positives = 18/38 (47%)

Query:   107 VSPYSPVECXXXXXXXDVHNSKPPTSISSVPNTVSFFS 144
             ++ YSP+         +  NS PP+ +    + ++ F+
Sbjct:   317 LNSYSPLSNVPSHGVGEWSNSMPPSHLGYSNSVLNQFN 354


>UNIPROTKB|F1NK07 [details] [associations]
            symbol:F1NK07 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 EMBL:AADN02014756 IPI:IPI00576473
            Ensembl:ENSGALT00000037124 OMA:SLIYARE Uniprot:F1NK07
        Length = 347

 Score = 270 (100.1 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
 Identities = 50/100 (50%), Positives = 71/100 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI +AP+ ++TL+ IYQ++   FP+Y+ + AGW+NSIRHNLSLN CF KV R
Sbjct:    87 SYSALIAMAIQSAPERKLTLSHIYQYVAENFPFYKRSKAGWQNSIRHNLSLNDCFRKVPR 146

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVKLPRVSPYSP 112
              +DDPGKG+YW +  N     D+G  ++K K  R  P +P
Sbjct:   147 DEDDPGKGNYWTLFPNCEKMFDNGNFRRKRKR-RSEPNTP 185

 Score = 38 (18.4 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
 Identities = 10/20 (50%), Positives = 13/20 (65%)

Query:   126 NSKPPTSISSVPNTVS-FFS 144
             +S P   ISS P+ +S FFS
Sbjct:   232 SSSPSGIISSTPSCLSTFFS 251


>UNIPROTKB|E2R126 [details] [associations]
            symbol:FOXJ2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0045893 GO:GO:0005730
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GeneTree:ENSGT00700000104094 CTD:55810 KO:K09403
            OMA:DLSQDSP EMBL:AAEX03015267 RefSeq:XP_853187.1
            Ensembl:ENSCAFT00000039687 GeneID:486703 KEGG:cfa:486703
            NextBio:20860437 Uniprot:E2R126
        Length = 572

 Score = 291 (107.5 bits), Expect = 5.7e-25, P = 5.7e-25
 Identities = 64/134 (47%), Positives = 79/134 (58%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA+LI  AI+++P  +MTL+EIY++I   FPYY+ A  GWKNSIRHNLSLNKCF KV R
Sbjct:    70 SYATLITYAINSSPAKKMTLSEIYRWICDNFPYYKNAGIGWKNSIRHNLSLNKCFRKVPR 129

Query:    75 PKDDPGKGSYWAIDY--------NHTADD-----GPSKKKVKLPRVSPYSPVECXXXXXX 121
             P+DDPGKGSYW ID          H  DD      P ++  K PR       E       
Sbjct:   130 PRDDPGKGSYWTIDTCPDISRKRRHPPDDDLSQDSPEQEASKSPRGGVPGSGEASLPSEG 189

Query:   122 XDVHNSKPPTSISS 135
                 + + PTSI+S
Sbjct:   190 NPQMSLQSPTSITS 203


>ZFIN|ZDB-GENE-100922-240 [details] [associations]
            symbol:foxj2 "forkhead box J2" species:7955 "Danio
            rerio" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-100922-240 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104094 EMBL:CR848818 IPI:IPI00994143
            RefSeq:XP_686801.4 Ensembl:ENSDART00000080396 GeneID:558490
            KEGG:dre:558490 NextBio:20882497 Bgee:E7FA97 Uniprot:E7FA97
        Length = 516

 Score = 289 (106.8 bits), Expect = 6.5e-25, P = 6.5e-25
 Identities = 62/137 (45%), Positives = 81/137 (59%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SYA+LI +AIS+AP+ +++LN+IY +I+ TFPYY  A  GWKNSIRHNLSLNKCF
Sbjct:    56 VKPPHSYATLIAMAISSAPEMKLSLNDIYTWISDTFPYYCRAGRGWKNSIRHNLSLNKCF 115

Query:    70 TKVARPKDDPGKGSYWAIDYNHTADDGPSKKKVKLPRVSPYSPVECXXXXXXXDVHNSKP 129
              KV RP+ DPGKGSYW +D      +    + VK     PY+  E            +  
Sbjct:   116 RKVPRPQSDPGKGSYWTMD---VPPESTQPRGVK----RPYTDDEHVVTPFPETQLPANQ 168

Query:   130 PTSISSVPNTVSFFSDP 146
             P  +   P+T S F  P
Sbjct:   169 PEPLPPQPDTKSTFPPP 185


>UNIPROTKB|Q9P0K8 [details] [associations]
            symbol:FOXJ2 "Forkhead box protein J2" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA;IDA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0019904 "protein domain specific
            binding" evidence=IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IC;IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0019904 GO:GO:0045893
            GO:GO:0005730 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 eggNOG:COG5025 GO:GO:0009888 EMBL:AF155132
            EMBL:AF155133 EMBL:BC126396 EMBL:BC136305 EMBL:AL161978
            IPI:IPI00000781 IPI:IPI00221299 PIR:T47161 RefSeq:NP_060886.1
            UniGene:Hs.120844 ProteinModelPortal:Q9P0K8 SMR:Q9P0K8
            IntAct:Q9P0K8 STRING:Q9P0K8 PhosphoSite:Q9P0K8 DMDM:13626933
            PRIDE:Q9P0K8 DNASU:55810 Ensembl:ENST00000162391
            Ensembl:ENST00000428177 GeneID:55810 KEGG:hsa:55810 UCSC:uc001qtt.1
            UCSC:uc001qtu.3 CTD:55810 GeneCards:GC12P008185 HGNC:HGNC:24818
            HPA:HPA008723 neXtProt:NX_Q9P0K8 PharmGKB:PA134982817
            HOGENOM:HOG000231184 HOVERGEN:HBG051648 InParanoid:Q9P0K8 KO:K09403
            OMA:DLSQDSP OrthoDB:EOG473PR7 PhylomeDB:Q9P0K8 GenomeRNAi:55810
            NextBio:60973 Bgee:Q9P0K8 CleanEx:HS_FOXJ2 Genevestigator:Q9P0K8
            GermOnline:ENSG00000065970 Uniprot:Q9P0K8
        Length = 574

 Score = 290 (107.1 bits), Expect = 7.4e-25, P = 7.4e-25
 Identities = 64/134 (47%), Positives = 79/134 (58%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA+LI  AI+++P  +MTL+EIY++I   FPYY+ A  GWKNSIRHNLSLNKCF KV R
Sbjct:    70 SYATLITYAINSSPAKKMTLSEIYRWICDNFPYYKNAGIGWKNSIRHNLSLNKCFRKVPR 129

Query:    75 PKDDPGKGSYWAIDY--------NHTADD-----GPSKKKVKLPRVSPYSPVECXXXXXX 121
             P+DDPGKGSYW ID          H  DD      P ++  K PR       E       
Sbjct:   130 PRDDPGKGSYWTIDTCPDISRKRRHPPDDDLSQDSPEQEASKSPRGGVAGSGEASLPPEG 189

Query:   122 XDVHNSKPPTSISS 135
                 + + PTSI+S
Sbjct:   190 NPQMSLQSPTSIAS 203


>MGI|MGI:1926805 [details] [associations]
            symbol:Foxj2 "forkhead box J2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0019904 "protein domain specific
            binding" evidence=IBA] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO;IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1926805 GO:GO:0019904 GO:GO:0045893 GO:GO:0005730
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 eggNOG:COG5025 GO:GO:0009888
            GeneTree:ENSGT00700000104094 CTD:55810 HOGENOM:HOG000231184
            HOVERGEN:HBG051648 KO:K09403 OMA:DLSQDSP OrthoDB:EOG473PR7
            EMBL:AF253052 EMBL:BC040395 IPI:IPI00112644 RefSeq:NP_068699.1
            UniGene:Mm.87142 ProteinModelPortal:Q9ES18 SMR:Q9ES18 STRING:Q9ES18
            PhosphoSite:Q9ES18 PRIDE:Q9ES18 Ensembl:ENSMUST00000003238
            Ensembl:ENSMUST00000177927 GeneID:60611 KEGG:mmu:60611
            UCSC:uc012esh.1 InParanoid:Q9ES18 NextBio:315058 Bgee:Q9ES18
            CleanEx:MM_FOXJ2 Genevestigator:Q9ES18
            GermOnline:ENSMUSG00000003154 Uniprot:Q9ES18
        Length = 565

 Score = 289 (106.8 bits), Expect = 9.1e-25, P = 9.1e-25
 Identities = 65/139 (46%), Positives = 82/139 (58%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA+LI  AI+++P  +MTL+EIY++I   FPYY+ A  GWKNSIRHNLSLNKCF KV R
Sbjct:    70 SYATLITYAINSSPAKKMTLSEIYRWICDNFPYYKNAGIGWKNSIRHNLSLNKCFRKVPR 129

Query:    75 PKDDPGKGSYWAIDY--------NHTADDGPSKKKVKLPRV-SPYSPVECXXXXXXXDVH 125
             P+DDPGKGSYW ID          H  DD  S+   +     SP   V           H
Sbjct:   130 PRDDPGKGSYWTIDTCPDISRKRRHPPDDDLSQDSPEQEASKSPRGGVPGSGEASLS--H 187

Query:   126 NSKPPTSISSVPNTVSFFS 144
                P  S+ S P++V+ +S
Sbjct:   188 EGTPQMSLQS-PSSVANYS 205


>RGD|1565101 [details] [associations]
            symbol:Foxj2 "forkhead box J2" species:10116 "Rattus norvegicus"
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007389
            "pattern specification process" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0019904 "protein domain specific binding" evidence=IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO;IBA] [GO:0048513 "organ development" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:1565101 GO:GO:0019904
            GO:GO:0045893 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 GO:GO:0009888 IPI:IPI00203957
            Ensembl:ENSRNOT00000011964 UCSC:RGD:1565101 ArrayExpress:D3ZZ52
            Uniprot:D3ZZ52
        Length = 565

 Score = 289 (106.8 bits), Expect = 9.1e-25, P = 9.1e-25
 Identities = 64/141 (45%), Positives = 79/141 (56%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA+LI  AI+++P  +MTL+EIY++I   FPYY+ A  GWKNSIRHNLSLNKCF KV R
Sbjct:    70 SYATLITYAINSSPAKKMTLSEIYRWICDNFPYYKNAGIGWKNSIRHNLSLNKCFRKVPR 129

Query:    75 PKDDPGKGSYWAIDY--------NHTADDGPSKKKVKLPRV-SPYSPVECXXXXXXXDVH 125
             P+DDPGKGSYW ID          H  DD  S+   +     SP   V           H
Sbjct:   130 PRDDPGKGSYWTIDTCPDISRKRRHPPDDDLSQDSPEQEASKSPRGGVPGSGEASLS--H 187

Query:   126 NSKPPTSISSVPNTVSFFSDP 146
                P  S+ S  +  S+   P
Sbjct:   188 EGNPQMSLQSPSSMASYSQGP 208


>UNIPROTKB|E1BTL6 [details] [associations]
            symbol:FOXJ2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0045893
            GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104094
            OMA:DLSQDSP EMBL:AADN02063280 IPI:IPI00597240
            Ensembl:ENSGALT00000023154 Uniprot:E1BTL6
        Length = 542

 Score = 288 (106.4 bits), Expect = 1.0e-24, P = 1.0e-24
 Identities = 51/74 (68%), Positives = 61/74 (82%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA+LI  AI+++P  +MTL+EIY++I   FPYY+ A  GWKNSIRHNLSLNKCF KV R
Sbjct:    70 SYATLITYAINSSPAKKMTLSEIYRWICDNFPYYKNAGIGWKNSIRHNLSLNKCFRKVPR 129

Query:    75 PKDDPGKGSYWAID 88
             P+DDPGKGSYW ID
Sbjct:   130 PRDDPGKGSYWTID 143


>UNIPROTKB|E1B8C0 [details] [associations]
            symbol:FOXJ2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0045893 GO:GO:0005730 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104094 CTD:55810 KO:K09403 OMA:DLSQDSP
            EMBL:DAAA02014401 IPI:IPI00705439 RefSeq:NP_001179699.1
            UniGene:Bt.103061 Ensembl:ENSBTAT00000026309 GeneID:540703
            KEGG:bta:540703 NextBio:20878784 Uniprot:E1B8C0
        Length = 560

 Score = 288 (106.4 bits), Expect = 1.1e-24, P = 1.1e-24
 Identities = 51/74 (68%), Positives = 61/74 (82%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA+LI  AI+++P  +MTL+EIY++I   FPYY+ A  GWKNSIRHNLSLNKCF KV R
Sbjct:    70 SYATLITYAINSSPAKKMTLSEIYRWICDNFPYYKNAGIGWKNSIRHNLSLNKCFRKVPR 129

Query:    75 PKDDPGKGSYWAID 88
             P+DDPGKGSYW ID
Sbjct:   130 PRDDPGKGSYWTID 143


>MGI|MGI:1096329 [details] [associations]
            symbol:Foxi1 "forkhead box I1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IC] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009957 "epidermal cell fate specification" evidence=IBA]
            [GO:0042472 "inner ear morphogenesis" evidence=IMP] [GO:0043049
            "otic placode formation" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO;IDA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 MGI:MGI:1096329 GO:GO:0043565
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0043049 eggNOG:COG5025 EMBL:AL671971 GO:GO:0009957
            GeneTree:ENSGT00690000101636 CTD:2299 HOGENOM:HOG000236333
            HOVERGEN:HBG067944 KO:K09401 OMA:QAYGVQR OrthoDB:EOG4XKV7D
            EMBL:AK019994 EMBL:BC007475 IPI:IPI00187526 RefSeq:NP_076396.3
            UniGene:Mm.32926 ProteinModelPortal:Q922I5 SMR:Q922I5 STRING:Q922I5
            PhosphoSite:Q922I5 PRIDE:Q922I5 Ensembl:ENSMUST00000060271
            GeneID:14233 KEGG:mmu:14233 UCSC:uc007ikw.1 InParanoid:Q922I5
            NextBio:285511 Bgee:Q922I5 CleanEx:MM_FOXI1 Genevestigator:Q922I5
            GermOnline:ENSMUSG00000047861 Uniprot:Q922I5
        Length = 372

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 58/130 (44%), Positives = 78/130 (60%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI  AP  R+TL++IYQ++   FP+Y ++ AGW+NSIRHNLSLN CF KV R
Sbjct:   121 SYSALIAMAIHGAPDQRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPR 180

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVKLPRVSPYSPVECXXXXXXXDVHNSKP-PT 131
              +DDPGKG+YW +D N     D+G  ++K K    S  S            +  S P PT
Sbjct:   181 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDSSSSTSSLASEKTENGLLASSPKPT 240

Query:   132 SISSVPNTVS 141
                 V +T S
Sbjct:   241 EPQEVLDTAS 250


>UNIPROTKB|Q4H3I9 [details] [associations]
            symbol:Ci-FoxG "Transcription factor protein" species:7719
            "Ciona intestinalis" [GO:0002052 "positive regulation of neuroblast
            proliferation" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IBA]
            [GO:0016199 "axon midline choice point recognition" evidence=IBA]
            [GO:0035058 "nonmotile primary cilium assembly" evidence=IBA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IBA] [GO:0045787 "positive regulation of cell cycle"
            evidence=IBA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0009792 GO:GO:0007346
            GO:GO:0043565 GO:GO:0045944 GO:GO:0016199 GO:GO:0045665
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0009953 GO:GO:0008134
            GO:GO:0045787 GO:GO:0002052 GO:GO:0051090 GO:GO:0035058
            eggNOG:COG5025 GO:GO:0009888 EMBL:AB210433 UniGene:Cin.33151
            InParanoid:Q4H3I9 Uniprot:Q4H3I9
        Length = 467

 Score = 266 (98.7 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
 Identities = 51/92 (55%), Positives = 67/92 (72%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI  +P+ R+TL++IYQ+IT TFPYY+E    W+NSIRHNLS NKCF KV R
Sbjct:   101 SYNALIMMAIKKSPRKRLTLSQIYQYITTTFPYYKENKQAWQNSIRHNLSSNKCFVKVPR 160

Query:    75 PKDDPGKGSYWAIDYNHTADD---GPSKKKVK 103
               DDPGKG+YW +D   ++DD   G S  K++
Sbjct:   161 HYDDPGKGNYWMLD--SSSDDVYIGSSTGKLR 190

 Score = 37 (18.1 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query:   105 PRV---SPYSPVECXXXXXXXDVHNSKPPTSISSVP 137
             PR+   +P SP             N+ PP S +S P
Sbjct:   312 PRIVKSNPASPEPVHSHYEQTTSPNTAPPRSDTSTP 347


>ZFIN|ZDB-GENE-030505-1 [details] [associations]
            symbol:foxi1 "forkhead box i1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0006357 "regulation
            of transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0060788 "ectodermal placode
            formation" evidence=IGI] [GO:0043049 "otic placode formation"
            evidence=IGI;IMP] [GO:0030916 "otic vesicle formation"
            evidence=IGI;IMP] [GO:0009957 "epidermal cell fate specification"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-030505-1 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0043049 GO:GO:0009957 HSSP:Q99958
            HOGENOM:HOG000236333 HOVERGEN:HBG067944 EMBL:AY242057
            IPI:IPI00513327 UniGene:Dr.20969 ProteinModelPortal:Q7T2N8
            SMR:Q7T2N8 STRING:Q7T2N8 InParanoid:Q7T2N8 ArrayExpress:Q7T2N8
            Uniprot:Q7T2N8
        Length = 419

 Score = 279 (103.3 bits), Expect = 2.4e-24, P = 2.4e-24
 Identities = 58/136 (42%), Positives = 83/136 (61%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI NA   ++TL++IYQ++   FP+Y+++ AGW+NSIRHNLSLN CF KVAR
Sbjct:   187 SYSALIAMAIQNAQDKKLTLSQIYQYVADNFPFYKKSKAGWQNSIRHNLSLNDCFKKVAR 246

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVKLPRVSPYSPVECXXXXXXXDVHN--SKPP 130
              +DDPGKG+YW +D N     D+G  ++K K         V+        D  +  S  P
Sbjct:   247 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRADGNAMSVKSEDALKLADTSSLMSASP 306

Query:   131 TSISSVPNTVSFFSDP 146
              S+ + P +    SDP
Sbjct:   307 PSLQNSPTS----SDP 318


>UNIPROTKB|Q6P8A3 [details] [associations]
            symbol:foxi1e "Forkhead box protein I1-ema" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009957
            "epidermal cell fate specification" evidence=IBA] [GO:0042664
            "negative regulation of endodermal cell fate specification"
            evidence=ISS] [GO:0043049 "otic placode formation" evidence=IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0048335 "negative regulation of mesodermal cell
            fate determination" evidence=ISS] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0045893 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0043049 eggNOG:COG5025 GO:GO:0009957 HSSP:Q99958
            GeneTree:ENSGT00690000101636 GO:GO:0042664 CTD:2299
            HOGENOM:HOG000236333 HOVERGEN:HBG067944 KO:K09401 OrthoDB:EOG4XKV7D
            GO:GO:0048335 EMBL:BC061326 RefSeq:NP_988949.1 UniGene:Str.2357
            ProteinModelPortal:Q6P8A3 SMR:Q6P8A3 STRING:Q6P8A3
            Ensembl:ENSXETT00000005340 GeneID:394546 KEGG:xtr:394546
            Xenbase:XB-GENE-494125 InParanoid:Q6P8A3 OMA:FYNTINA Bgee:Q6P8A3
            Uniprot:Q6P8A3
        Length = 373

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 53/100 (53%), Positives = 71/100 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI  AP  R+TL++IYQ++   FP+Y ++ AGW+NSIRHNLSLN CF KV R
Sbjct:   127 SYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPR 186

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVKLPRVSPYSP 112
              +DDPGKG+YW +D N     D+G  ++K K  R S  SP
Sbjct:   187 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK--RKSDVSP 224


>UNIPROTKB|Q7ZYQ0 [details] [associations]
            symbol:foxi1e "Forkhead box protein I1-ema" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0042664
            "negative regulation of endodermal cell fate specification"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0048335 "negative regulation of
            mesodermal cell fate determination" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0007275 GO:GO:0005634 GO:GO:0045893 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            HSSP:Q99958 GO:GO:0042664 CTD:2299 HOVERGEN:HBG067944 KO:K09401
            EMBL:DQ026065 EMBL:BC042303 RefSeq:NP_001080367.1 UniGene:Xl.20089
            ProteinModelPortal:Q7ZYQ0 SMR:Q7ZYQ0 GeneID:380059 KEGG:xla:380059
            Xenbase:XB-GENE-494129 GO:GO:0048335 Uniprot:Q7ZYQ0
        Length = 373

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 53/100 (53%), Positives = 71/100 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI  AP  R+TL++IYQ++   FP+Y ++ AGW+NSIRHNLSLN CF KV R
Sbjct:   127 SYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPR 186

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVKLPRVSPYSP 112
              +DDPGKG+YW +D N     D+G  ++K K  R S  SP
Sbjct:   187 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK--RKSDVSP 224


>RGD|1307421 [details] [associations]
            symbol:Foxi1 "forkhead box I1" species:10116 "Rattus norvegicus"
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009957 "epidermal cell fate specification" evidence=IBA]
            [GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043049
            "otic placode formation" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA;ISO] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA;ISO]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:1307421 GO:GO:0043565
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0044212 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 EMBL:CH473948 GO:GO:0051090
            GO:GO:0043049 GO:GO:0009957 GeneTree:ENSGT00690000101636 CTD:2299
            KO:K09401 OrthoDB:EOG4XKV7D OMA:FYNTINA IPI:IPI00368760
            RefSeq:NP_001099246.1 UniGene:Rn.32116 Ensembl:ENSRNOT00000009058
            GeneID:287185 KEGG:rno:287185 UCSC:RGD:1307421 NextBio:625680
            Uniprot:D4A7G2
        Length = 372

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 57/130 (43%), Positives = 79/130 (60%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI  AP  R+TL++IYQ++   FP+Y ++ AGW+NSIRHNLSLN CF KV R
Sbjct:   121 SYSALIAMAIHGAPDQRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPR 180

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVKLPRVSPYSPVECXXXXXXXDVHNSKP-PT 131
              +DDPGKG+YW +D N     D+G  ++K K    +  S            + +S P PT
Sbjct:   181 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDASSSTGSLASEKTENRLLSSSPKPT 240

Query:   132 SISSVPNTVS 141
                 V +T S
Sbjct:   241 EPQEVLDTAS 250


>UNIPROTKB|Q4H3I4 [details] [associations]
            symbol:Ci-FoxI-c "Transcription factor protein"
            species:7719 "Ciona intestinalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009653 "anatomical structure morphogenesis" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0009653 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 eggNOG:COG5025 GO:GO:0009888 KO:K09401 EMBL:AB210438
            RefSeq:NP_001071713.1 UniGene:Cin.33229 ProteinModelPortal:Q4H3I4
            SMR:Q4H3I4 GeneID:778616 KEGG:cin:778616 CTD:778616
            HOGENOM:HOG000169943 HOVERGEN:HBG086629 InParanoid:Q4H3I4
            Uniprot:Q4H3I4
        Length = 581

 Score = 285 (105.4 bits), Expect = 2.7e-24, P = 2.7e-24
 Identities = 49/91 (53%), Positives = 72/91 (79%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI N+P+ ++TL++IYQ++   FP+Y+++ AGW+NSIRHNLSLN CF KVAR
Sbjct:   262 SYSALIAMAIQNSPEKKLTLSQIYQYVAENFPFYKKSRAGWQNSIRHNLSLNDCFKKVAR 321

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW++D N     D+G  ++K K
Sbjct:   322 DEDDPGKGNYWSLDPNCEKMFDNGNFRRKRK 352


>UNIPROTKB|J9PB84 [details] [associations]
            symbol:FOXI3 "Forkhead box protein I3" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 EMBL:AAEX03010925
            Ensembl:ENSCAFT00000045700 Uniprot:J9PB84
        Length = 369

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 49/91 (53%), Positives = 69/91 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI +AP+ ++TL+ IYQF+  +FP+Y+ + AGW+NSIRHNLSLN CF KV R
Sbjct:    95 SYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCFKKVPR 154

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   155 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 185


>MGI|MGI:1347481 [details] [associations]
            symbol:Foxc2 "forkhead box C2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0001077 "RNA polymerase
            II core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=ISO] [GO:0001501 "skeletal system
            development" evidence=IGI;IMP] [GO:0001503 "ossification"
            evidence=IMP] [GO:0001568 "blood vessel development" evidence=IGI]
            [GO:0001569 "patterning of blood vessels" evidence=IGI] [GO:0001570
            "vasculogenesis" evidence=IBA] [GO:0001656 "metanephros
            development" evidence=IMP] [GO:0001657 "ureteric bud development"
            evidence=IMP] [GO:0001756 "somitogenesis" evidence=IGI] [GO:0001822
            "kidney development" evidence=IMP] [GO:0001945 "lymph vessel
            development" evidence=IGI] [GO:0001946 "lymphangiogenesis"
            evidence=ISO;ISS;IBA] [GO:0001974 "blood vessel remodeling"
            evidence=IGI] [GO:0003007 "heart morphogenesis" evidence=IGI]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO;ISS;IDA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IGI] [GO:0005634 "nucleus" evidence=ISO;IC]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IGI]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007507 "heart development" evidence=ISO;IGI;IMP] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008283 "cell
            proliferation" evidence=IMP] [GO:0008286 "insulin receptor
            signaling pathway" evidence=ISO;ISS;IBA] [GO:0008301 "DNA binding,
            bending" evidence=IBA] [GO:0009725 "response to hormone stimulus"
            evidence=ISO;ISS] [GO:0010595 "positive regulation of endothelial
            cell migration" evidence=IDA] [GO:0014032 "neural crest cell
            development" evidence=IGI] [GO:0014034 "neural crest cell fate
            commitment" evidence=IBA] [GO:0030199 "collagen fibril
            organization" evidence=IMP] [GO:0031490 "chromatin DNA binding"
            evidence=ISO;ISS;IBA] [GO:0033625 "positive regulation of integrin
            activation" evidence=IC] [GO:0033630 "positive regulation of cell
            adhesion mediated by integrin" evidence=IDA] [GO:0035050 "embryonic
            heart tube development" evidence=IGI] [GO:0035470 "positive
            regulation of vascular wound healing" evidence=IDA] [GO:0043010
            "camera-type eye development" evidence=IMP] [GO:0043066 "negative
            regulation of apoptotic process" evidence=IGI] [GO:0043565
            "sequence-specific DNA binding" evidence=ISO;ISS] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO;ISS;IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0046620 "regulation of organ growth" evidence=IGI] [GO:0048010
            "vascular endothelial growth factor receptor signaling pathway"
            evidence=IGI] [GO:0048341 "paraxial mesoderm formation"
            evidence=IGI] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IMP] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=IMP] [GO:0048703 "embryonic viscerocranium
            morphogenesis" evidence=IMP] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IMP] [GO:0048844 "artery morphogenesis"
            evidence=IMP] [GO:0050880 "regulation of blood vessel size"
            evidence=IGI] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IGI]
            [GO:0060038 "cardiac muscle cell proliferation" evidence=IGI]
            [GO:0072011 "glomerular endothelium development" evidence=IMP]
            [GO:0072112 "glomerular visceral epithelial cell differentiation"
            evidence=IMP] [GO:0072144 "glomerular mesangial cell development"
            evidence=IMP] [GO:0090050 "positive regulation of cell migration
            involved in sprouting angiogenesis" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1347481 GO:GO:0008286 GO:GO:0043066 GO:GO:0043565
            GO:GO:0030199 GO:GO:0045944 GO:GO:0007219 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0001077
            GO:GO:0000122 GO:GO:0008301 GO:GO:0001756 GO:GO:0043010
            GO:GO:0044212 GO:GO:0001974 GO:GO:0003690 GO:GO:0072144
            GO:GO:0001946 GO:GO:0001569 GO:GO:0033630 GO:GO:0001570
            GO:GO:0008134 GO:GO:0014032 GO:GO:0050880 GO:GO:0001503
            GO:GO:0048844 GO:GO:0031490 GO:GO:0001656 GO:GO:0001657
            GO:GO:0051090 GO:GO:0046620 GO:GO:0072112 GO:GO:0048010
            GO:GO:0060038 GO:GO:0055010 GO:GO:0033625 GO:GO:0072011
            GO:GO:0048703 eggNOG:COG5025 KO:K09396 GO:GO:0035050
            GeneTree:ENSGT00690000101636 HOVERGEN:HBG051640 GO:GO:0014034
            GO:GO:0048343 HOGENOM:HOG000007939 OrthoDB:EOG4MCX19 CTD:2303
            OMA:LNHLPGH GO:GO:0090050 GO:GO:0035470 EMBL:X92499 EMBL:Y08222
            EMBL:X74040 EMBL:AK076319 EMBL:S63607 IPI:IPI00126263 PIR:S34472
            RefSeq:NP_038547.2 UniGene:Mm.14092 ProteinModelPortal:Q61850
            SMR:Q61850 STRING:Q61850 PhosphoSite:Q61850 PRIDE:Q61850
            Ensembl:ENSMUST00000054691 GeneID:14234 KEGG:mmu:14234
            InParanoid:Q61850 NextBio:285515 Bgee:Q61850 CleanEx:MM_FOXC2
            Genevestigator:Q61850 GermOnline:ENSMUSG00000046714 Uniprot:Q61850
        Length = 494

 Score = 264 (98.0 bits), Expect = 4.4e-24, Sum P(2) = 4.4e-24
 Identities = 48/79 (60%), Positives = 58/79 (73%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NAP+ ++TLN IYQFI   FP+YRE   GW+NSIRHNLSLN+CF
Sbjct:    70 VKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 129

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW +D
Sbjct:   130 VKVPRDDKKPGKGSYWTLD 148

 Score = 38 (18.4 bits), Expect = 4.4e-24, Sum P(2) = 4.4e-24
 Identities = 16/47 (34%), Positives = 19/47 (40%)

Query:    95 DGP--SKKKV--KLPRVSPYSPVECXXXXXXXDVHNSKPPTSISSVP 137
             DGP  ++KKV  K    SP  PV         +      P S SS P
Sbjct:   201 DGPKEAEKKVVVKSEAASPALPVITKVETLSPEGALQASPRSASSTP 247


>UNIPROTKB|J9P6N9 [details] [associations]
            symbol:FOXI3 "Forkhead box protein I3" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 OMA:APGELGW EMBL:AAEX03010925
            Ensembl:ENSCAFT00000043061 Uniprot:J9P6N9
        Length = 417

 Score = 276 (102.2 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 49/91 (53%), Positives = 69/91 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI +AP+ ++TL+ IYQF+  +FP+Y+ + AGW+NSIRHNLSLN CF KV R
Sbjct:   143 SYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCFKKVPR 202

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   203 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 233


>ZFIN|ZDB-GENE-031126-4 [details] [associations]
            symbol:foxi3b "forkhead box I3b" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0043049 "otic
            placode formation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0009957 "epidermal cell fate specification"
            evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 ZFIN:ZDB-GENE-031126-4 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0043049 GO:GO:0009957 HSSP:Q99958
            HOVERGEN:HBG067944 KO:K09401 EMBL:AY331584 IPI:IPI00500300
            RefSeq:NP_944600.1 UniGene:Dr.89473 ProteinModelPortal:Q7T1C0
            SMR:Q7T1C0 GeneID:387258 KEGG:dre:387258 CTD:387258
            InParanoid:Q7T1C0 NextBio:20814129 Uniprot:Q7T1C0
        Length = 383

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 49/91 (53%), Positives = 68/91 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI  AP+ R+TL++IYQ++   FP+Y ++ AGW+NSIRHNLSLN CF KV R
Sbjct:   134 SYSALIAMAIHGAPERRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPR 193

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   194 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 224


>UNIPROTKB|F1MC99 [details] [associations]
            symbol:FOXI3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00690000101636
            EMBL:DAAA02031109 IPI:IPI00708357 Ensembl:ENSBTAT00000054707
            OMA:APGELGW Uniprot:F1MC99
        Length = 418

 Score = 276 (102.2 bits), Expect = 5.4e-24, P = 5.4e-24
 Identities = 49/91 (53%), Positives = 69/91 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI +AP+ ++TL+ IYQF+  +FP+Y+ + AGW+NSIRHNLSLN CF KV R
Sbjct:   146 SYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCFKKVPR 205

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   206 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 236


>UNIPROTKB|A8MTJ6 [details] [associations]
            symbol:FOXI3 "Forkhead box protein I3" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009957 "epidermal cell fate specification"
            evidence=IBA] [GO:0043049 "otic placode formation" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0043049 GO:GO:0009957 HOVERGEN:HBG067944
            KO:K09401 CTD:344167 EMBL:AC012671 EMBL:BN001221 EMBL:BN001222
            IPI:IPI00787337 RefSeq:NP_001129121.1 UniGene:Hs.716722
            ProteinModelPortal:A8MTJ6 SMR:A8MTJ6 PRIDE:A8MTJ6 GeneID:344167
            KEGG:hsa:344167 UCSC:uc010ytq.1 GeneCards:GC02M088747
            HGNC:HGNC:35123 MIM:612351 neXtProt:NX_A8MTJ6 PharmGKB:PA164720107
            InParanoid:A8MTJ6 GenomeRNAi:344167 NextBio:98650
            Genevestigator:A8MTJ6 Uniprot:A8MTJ6
        Length = 420

 Score = 276 (102.2 bits), Expect = 5.6e-24, P = 5.6e-24
 Identities = 49/91 (53%), Positives = 69/91 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI +AP+ ++TL+ IYQF+  +FP+Y+ + AGW+NSIRHNLSLN CF KV R
Sbjct:   149 SYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCFKKVPR 208

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   209 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 239


>UNIPROTKB|Q9PVY9 [details] [associations]
            symbol:foxc2-a "Forkhead box protein C2-A" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0007498 "mesoderm development" evidence=IEP]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0007275 GO:GO:0005634 GO:GO:0045893
            GO:GO:0007498 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 KO:K09396
            HSSP:Q99958 HOVERGEN:HBG051640 EMBL:AJ249224 EMBL:BC111544
            PIR:E56556 RefSeq:NP_001089960.2 UniGene:Xl.20334
            ProteinModelPortal:Q9PVY9 SMR:Q9PVY9 GeneID:735030 KEGG:xla:735030
            CTD:735030 Xenbase:XB-GENE-865122 Uniprot:Q9PVY9
        Length = 465

 Score = 263 (97.6 bits), Expect = 5.7e-24, Sum P(2) = 5.7e-24
 Identities = 48/79 (60%), Positives = 58/79 (73%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NAP  ++TLN IYQFI   FP+YRE   GW+NSIRHNLSLN+CF
Sbjct:    71 VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 130

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW++D
Sbjct:   131 VKVPRDDKKPGKGSYWSLD 149

 Score = 36 (17.7 bits), Expect = 5.7e-24, Sum P(2) = 5.7e-24
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query:    86 AIDYNHTADDGPSKKKVKLPRVSPY---SPV 113
             +I   H A +G S + +   R SP+   SPV
Sbjct:   248 SIPDQHPASNGFSVENIMTLRTSPHGDLSPV 278


>UNIPROTKB|Q9PVY8 [details] [associations]
            symbol:foxc2-b "Forkhead box protein C2-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0007498 "mesoderm development" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0007275 GO:GO:0005634 GO:GO:0045893
            GO:GO:0007498 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 HSSP:Q99958
            HOVERGEN:HBG051640 EMBL:AJ249225 EMBL:BC170193 EMBL:BC170195
            RefSeq:NP_001083920.1 UniGene:Xl.508 GeneID:399191 KEGG:xla:399191
            CTD:399191 Xenbase:XB-GENE-6254394 Uniprot:Q9PVY8
        Length = 461

 Score = 263 (97.6 bits), Expect = 6.7e-24, Sum P(2) = 6.7e-24
 Identities = 48/79 (60%), Positives = 58/79 (73%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NAP  ++TLN IYQFI   FP+YRE   GW+NSIRHNLSLN+CF
Sbjct:    71 VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 130

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW++D
Sbjct:   131 VKVPRDDKKPGKGSYWSLD 149

 Score = 35 (17.4 bits), Expect = 6.7e-24, Sum P(2) = 6.7e-24
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query:    86 AIDYNHTADDGPSKKKVKLPRVSPY---SPV 113
             +I   H A +G S   +   R SP+   SPV
Sbjct:   248 SIPEQHPASNGFSVDNIMTLRTSPHGDLSPV 278


>UNIPROTKB|Q6NVT7 [details] [associations]
            symbol:foxc2 "Forkhead box protein C2" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001503 "ossification"
            evidence=IBA] [GO:0001569 "patterning of blood vessels"
            evidence=IBA] [GO:0001570 "vasculogenesis" evidence=IBA]
            [GO:0001656 "metanephros development" evidence=IBA] [GO:0001657
            "ureteric bud development" evidence=IBA] [GO:0001756
            "somitogenesis" evidence=IBA] [GO:0001946 "lymphangiogenesis"
            evidence=ISS;IBA] [GO:0001974 "blood vessel remodeling"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007219 "Notch
            signaling pathway" evidence=IBA] [GO:0007498 "mesoderm development"
            evidence=ISS] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008286 "insulin receptor signaling pathway"
            evidence=ISS;IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009725 "response to hormone stimulus" evidence=ISS]
            [GO:0014034 "neural crest cell fate commitment" evidence=IBA]
            [GO:0030199 "collagen fibril organization" evidence=IBA]
            [GO:0031490 "chromatin DNA binding" evidence=ISS;IBA] [GO:0035050
            "embryonic heart tube development" evidence=IBA] [GO:0043010
            "camera-type eye development" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0046620 "regulation of
            organ growth" evidence=IBA] [GO:0048010 "vascular endothelial
            growth factor receptor signaling pathway" evidence=IBA] [GO:0048343
            "paraxial mesodermal cell fate commitment" evidence=IBA]
            [GO:0048703 "embryonic viscerocranium morphogenesis" evidence=IBA]
            [GO:0048844 "artery morphogenesis" evidence=IBA] [GO:0050880
            "regulation of blood vessel size" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0055010 "ventricular cardiac muscle
            tissue morphogenesis" evidence=IBA] [GO:0060038 "cardiac muscle
            cell proliferation" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0008286
            GO:GO:0043565 GO:GO:0030199 GO:GO:0045944 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0001756 GO:GO:0043010 GO:GO:0001974
            GO:GO:0003690 GO:GO:0001946 GO:GO:0001569 GO:GO:0001570
            GO:GO:0008134 GO:GO:0050880 GO:GO:0001503 GO:GO:0048844
            GO:GO:0031490 GO:GO:0001656 GO:GO:0001657 GO:GO:0051090
            GO:GO:0046620 GO:GO:0048010 GO:GO:0060038 GO:GO:0055010
            GO:GO:0048703 eggNOG:COG5025 KO:K09396 GO:GO:0035050 HSSP:Q99958
            GeneTree:ENSGT00690000101636 HOVERGEN:HBG051640 GO:GO:0014034
            GO:GO:0048343 HOGENOM:HOG000007939 OrthoDB:EOG4MCX19 CTD:2303
            EMBL:CR762327 EMBL:BC067916 RefSeq:NP_998857.1 UniGene:Str.2696
            ProteinModelPortal:Q6NVT7 SMR:Q6NVT7 STRING:Q6NVT7
            Ensembl:ENSXETT00000035768 GeneID:407875 KEGG:xtr:407875
            Xenbase:XB-GENE-481382 InParanoid:Q6NVT7 OMA:ARYSVAD Bgee:Q6NVT7
            Uniprot:Q6NVT7
        Length = 464

 Score = 262 (97.3 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
 Identities = 48/79 (60%), Positives = 57/79 (72%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NAP  ++TLN IYQFI   FP+YRE   GW+NSIRHNLSLN+CF
Sbjct:    71 VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 130

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW +D
Sbjct:   131 VKVPRDDKKPGKGSYWTLD 149

 Score = 36 (17.7 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query:    86 AIDYNHTADDGPSKKKVKLPRVSPY---SPV 113
             +I   H A +G S + +   R SP+   SPV
Sbjct:   248 SIPDQHPASNGFSVENIMTLRTSPHGDLSPV 278


>UNIPROTKB|B5RHS5 [details] [associations]
            symbol:FOXI3 "Forkhead box protein I3" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 eggNOG:COG5025
            HOGENOM:HOG000236333 HOVERGEN:HBG067944 KO:K09401 OrthoDB:EOG457573
            EMBL:AM998820 RefSeq:NP_001129118.1 UniGene:Cfa.47611 GeneID:483075
            KEGG:cfa:483075 CTD:344167 NextBio:20857535 Uniprot:B5RHS5
        Length = 436

 Score = 276 (102.2 bits), Expect = 7.6e-24, P = 7.6e-24
 Identities = 49/91 (53%), Positives = 69/91 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI +AP+ ++TL+ IYQF+  +FP+Y+ + AGW+NSIRHNLSLN CF KV R
Sbjct:   162 SYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCFKKVPR 221

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   222 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 252


>UNIPROTKB|Q2V889 [details] [associations]
            symbol:FoxJ1 "Forkhead transcription factor J1"
            species:7668 "Strongylocentrotus purpuratus" [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007368
            "determination of left/right symmetry" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0019904 "protein domain specific binding" evidence=IBA]
            [GO:0030036 "actin cytoskeleton organization" evidence=IBA]
            [GO:0032862 "activation of Rho GTPase activity" evidence=IBA]
            [GO:0035089 "establishment of apical/basal cell polarity"
            evidence=IBA] [GO:0048513 "organ development" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0060972
            "left/right pattern formation" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0019904
            GO:GO:0030036 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0007368 GO:GO:0008134 GO:GO:0051090
            GO:GO:0048513 GO:GO:0032862 eggNOG:COG5025 GO:GO:0009888
            GO:GO:0060972 CTD:2302 KO:K09402 GO:GO:0035089 EMBL:DQ286742
            RefSeq:NP_001073013.1 UniGene:Spu.10715 ProteinModelPortal:Q2V889
            SMR:Q2V889 GeneID:581613 KEGG:spu:581613 Uniprot:Q2V889
        Length = 468

 Score = 258 (95.9 bits), Expect = 8.6e-24, Sum P(2) = 8.6e-24
 Identities = 51/102 (50%), Positives = 71/102 (69%)

Query:     3 ITYKTGN-IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             I YKT + IK   SY++LI +A+  + + ++TL+ IY++IT  F YY+ A+  W+NSIRH
Sbjct:   140 IDYKTNSSIKPPYSYSTLIWMAMKESKKHKITLSSIYKWITENFKYYQVADPSWQNSIRH 199

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAIDYNHT--ADDGPSKKK 101
             NLSLNKCF KV R KD+PGKG +W ID  H    ++G  KK+
Sbjct:   200 NLSLNKCFQKVPRKKDEPGKGGFWRIDPAHADELENGVFKKR 241

 Score = 40 (19.1 bits), Expect = 8.6e-24, Sum P(2) = 8.6e-24
 Identities = 8/15 (53%), Positives = 9/15 (60%)

Query:    98 SKKKVKLPRVSPYSP 112
             S KKVK+ R   Y P
Sbjct:   293 SSKKVKMSRSQSYKP 307


>UNIPROTKB|E1BN87 [details] [associations]
            symbol:FOXI2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00690000101636
            KO:K09401 CTD:399823 OMA:IYQYVAG EMBL:DAAA02059569 IPI:IPI00706262
            RefSeq:NP_001179878.1 UniGene:Bt.106534 Ensembl:ENSBTAT00000008160
            GeneID:613373 KEGG:bta:613373 NextBio:20898544 Uniprot:E1BN87
        Length = 312

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 48/91 (52%), Positives = 69/91 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI +AP+ ++TL++IYQ++   FP+Y+ + AGW+NSIRHNLSLN CF KV R
Sbjct:   101 SYSALIAMAIQSAPRRKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFKKVPR 160

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   161 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 191


>UNIPROTKB|E1BPY1 [details] [associations]
            symbol:FOXI1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042472 "inner
            ear morphogenesis" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0044212 GO:GO:0042472 GeneTree:ENSGT00690000101636 CTD:2299
            KO:K09401 OMA:QAYGVQR EMBL:DAAA02049848 IPI:IPI00715575
            RefSeq:NP_001179172.1 UniGene:Bt.85445 Ensembl:ENSBTAT00000019467
            GeneID:539442 KEGG:bta:539442 NextBio:20877990 Uniprot:E1BPY1
        Length = 379

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 49/91 (53%), Positives = 67/91 (73%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI  AP  R+TL++IYQ++   FP+Y ++ AGW+NSIRHNLSLN CF KV R
Sbjct:   128 SYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPR 187

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   188 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 218


>UNIPROTKB|E2RRX4 [details] [associations]
            symbol:FOXI1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0044212
            GO:GO:0042472 GeneTree:ENSGT00690000101636 CTD:2299 KO:K09401
            OMA:QAYGVQR EMBL:AAEX03003020 RefSeq:XP_546245.2
            Ensembl:ENSCAFT00000026862 GeneID:489127 KEGG:cfa:489127
            Uniprot:E2RRX4
        Length = 378

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 49/91 (53%), Positives = 67/91 (73%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI  AP  R+TL++IYQ++   FP+Y ++ AGW+NSIRHNLSLN CF KV R
Sbjct:   128 SYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPR 187

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   188 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 218


>UNIPROTKB|Q12951 [details] [associations]
            symbol:FOXI1 "Forkhead box protein I1" species:9606 "Homo
            sapiens" [GO:0009790 "embryo development" evidence=NAS] [GO:0008301
            "DNA binding, bending" evidence=IBA;NAS] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0009957 "epidermal cell fate
            specification" evidence=IBA] [GO:0043049 "otic placode formation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0005634
            "nucleus" evidence=IC] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=ISS] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0043565 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0044212 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0043049 eggNOG:COG5025
            GO:GO:0009957 EMBL:BC029778 EMBL:L13203 EMBL:AY707089 EMBL:U13224
            IPI:IPI00158273 IPI:IPI00220405 PIR:A47450 PIR:S51629
            RefSeq:NP_036320.2 RefSeq:NP_658982.1 UniGene:Hs.87236
            ProteinModelPortal:Q12951 SMR:Q12951 STRING:Q12951
            PhosphoSite:Q12951 DMDM:150421552 PRIDE:Q12951 DNASU:2299
            Ensembl:ENST00000306268 Ensembl:ENST00000449804 GeneID:2299
            KEGG:hsa:2299 UCSC:uc003mai.4 UCSC:uc003maj.4 CTD:2299
            GeneCards:GC05P169465 HGNC:HGNC:3815 MIM:601093 neXtProt:NX_Q12951
            Orphanet:705 PharmGKB:PA28232 HOGENOM:HOG000236333
            HOVERGEN:HBG067944 InParanoid:Q12951 KO:K09401 OMA:QAYGVQR
            OrthoDB:EOG4XKV7D PhylomeDB:Q12951 GenomeRNAi:2299 NextBio:9331
            ArrayExpress:Q12951 Bgee:Q12951 CleanEx:HS_FOXI1
            Genevestigator:Q12951 GermOnline:ENSG00000168269 Uniprot:Q12951
        Length = 378

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 49/91 (53%), Positives = 67/91 (73%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI  AP  R+TL++IYQ++   FP+Y ++ AGW+NSIRHNLSLN CF KV R
Sbjct:   127 SYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPR 186

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   187 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 217


>UNIPROTKB|F1RR95 [details] [associations]
            symbol:FOXI1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042472 "inner
            ear morphogenesis" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0044212 GO:GO:0042472 GeneTree:ENSGT00690000101636 CTD:2299
            KO:K09401 OMA:QAYGVQR EMBL:CU694271 RefSeq:XP_003134114.1
            Ensembl:ENSSSCT00000018521 GeneID:100511481 KEGG:ssc:100511481
            Uniprot:F1RR95
        Length = 378

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 49/91 (53%), Positives = 67/91 (73%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI  AP  R+TL++IYQ++   FP+Y ++ AGW+NSIRHNLSLN CF KV R
Sbjct:   128 SYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPR 187

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   188 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 218


>RGD|1561816 [details] [associations]
            symbol:Foxi3 "forkhead box I3" species:10116 "Rattus norvegicus"
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009957 "epidermal cell fate specification"
            evidence=IBA] [GO:0043049 "otic placode formation" evidence=IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 RGD:1561816
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 EMBL:CH473957 GO:GO:0043049
            GO:GO:0009957 GeneTree:ENSGT00690000101636 KO:K09401
            OrthoDB:EOG457573 CTD:344167 IPI:IPI00188027 RefSeq:NP_001102819.1
            UniGene:Rn.218636 Ensembl:ENSRNOT00000008494 GeneID:502846
            KEGG:rno:502846 UCSC:RGD:1561816 NextBio:712574 Uniprot:D3ZLN2
        Length = 400

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 48/89 (53%), Positives = 67/89 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI +AP+ ++TL+ IYQF+   FP+Y+ + AGW+NSIRHNLSLN CF KV R
Sbjct:   135 SYSALIAMAIQSAPERKLTLSHIYQFVADNFPFYQRSKAGWQNSIRHNLSLNDCFKKVPR 194

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKK 101
              +DDPGKG+YW +D N     D+G  ++K
Sbjct:   195 DEDDPGKGNYWTLDPNCEKMFDNGNFRRK 223


>UNIPROTKB|Q28HT3 [details] [associations]
            symbol:foxi2 "Forkhead box protein I2" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 eggNOG:COG5025 HOVERGEN:HBG067944
            KO:K09401 CTD:399823 EMBL:CR760754 RefSeq:NP_001016544.1
            UniGene:Str.6457 ProteinModelPortal:Q28HT3 SMR:Q28HT3 GeneID:549298
            KEGG:xtr:549298 Xenbase:XB-GENE-982122 Uniprot:Q28HT3
        Length = 368

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 48/91 (52%), Positives = 68/91 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY+SLI +AI N P+ ++TL++IY ++   FP+Y+++ AGW+NSIRHNLSLN CF KVAR
Sbjct:   128 SYSSLIAMAIQNNPEKKLTLSQIYSYVAENFPFYKKSKAGWQNSIRHNLSLNDCFKKVAR 187

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
               +DPGKG+YW +D N     D+G  ++K K
Sbjct:   188 DDNDPGKGNYWTLDPNCEKMFDNGNFRRKRK 218


>ZFIN|ZDB-GENE-031126-2 [details] [associations]
            symbol:foxi2 "forkhead box I2" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0009957 "epidermal cell fate specification"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0043049 "otic placode formation" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0006357 "regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-031126-2 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0043049 GO:GO:0009957 HSSP:Q99958 HOVERGEN:HBG067944
            EMBL:AY331582 IPI:IPI00493834 UniGene:Dr.152085
            ProteinModelPortal:Q7T1C2 SMR:Q7T1C2 InParanoid:Q7T1C2
            Uniprot:Q7T1C2
        Length = 383

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 48/91 (52%), Positives = 69/91 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI NA + ++TL++IYQ++   FP+Y+++ AGW+NSIRHNLSLN CF KV R
Sbjct:   133 SYSALIAMAIQNAHEKKLTLSQIYQYVADNFPFYKKSKAGWQNSIRHNLSLNDCFKKVPR 192

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   193 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 223


>ZFIN|ZDB-GENE-010302-1 [details] [associations]
            symbol:foxc1a "forkhead box C1a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043114 "regulation of vascular
            permeability" evidence=IGI] [GO:0061386 "closure of optic fissure"
            evidence=IMP] [GO:0001568 "blood vessel development" evidence=IGI]
            [GO:0043010 "camera-type eye development" evidence=IGI] [GO:0001756
            "somitogenesis" evidence=IMP] [GO:0001944 "vasculature development"
            evidence=IGI;IMP] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0039021 "pronephric glomerulus
            development" evidence=IGI] [GO:0072149 "glomerular visceral
            epithelial cell fate commitment" evidence=IGI] [GO:0030325 "adrenal
            gland development" evidence=IGI] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-010302-1 GO:GO:0005634 GO:GO:0030325 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0001756 GO:GO:0001568 KO:K09396 HSSP:Q99958
            GeneTree:ENSGT00690000101636 HOVERGEN:HBG051640
            HOGENOM:HOG000007939 EMBL:CU929125 EMBL:AF219949 EMBL:BC053129
            IPI:IPI00510932 RefSeq:NP_571803.1 UniGene:Dr.82483
            ProteinModelPortal:Q9DE25 SMR:Q9DE25 PRIDE:Q9DE25
            Ensembl:ENSDART00000122732 GeneID:100148408 KEGG:dre:100148408
            CTD:100148408 NextBio:20792036 Bgee:Q9DE25 GO:GO:0061386
            GO:GO:0072149 GO:GO:0039021 Uniprot:Q9DE25
        Length = 476

 Score = 257 (95.5 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
 Identities = 46/79 (58%), Positives = 57/79 (72%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI N+P  ++TLN IYQFI   FP+YR+   GW+NSIRHNLSLN+CF
Sbjct:    73 VKPPYSYIALITMAIQNSPDKKVTLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECF 132

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW +D
Sbjct:   133 VKVPRDDKKPGKGSYWTLD 151

 Score = 40 (19.1 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query:   106 RVSPYSPVECXXXXXXXDVHNSKPPTSISSVPNTVSFFSDP 146
             R SP+S  E              P  S++  PN  S +S P
Sbjct:   287 RGSPHSSGELTPSLVAPSRTGITPTLSLNYSPNQSSVYSSP 327

 Score = 33 (16.7 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
 Identities = 7/20 (35%), Positives = 10/20 (50%)

Query:   127 SKPPTSISSVPNTVSFFSDP 146
             S PP ++S   +TV     P
Sbjct:   221 STPPQAVSPTLSTVPKIESP 240


>ZFIN|ZDB-GENE-980605-6 [details] [associations]
            symbol:foxd2 "forkhead box D2" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-980605-6 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 KO:K09397 CTD:2297 HOVERGEN:HBG051641
            OrthoDB:EOG45MN6S HOGENOM:HOG000231285 EMBL:FP016062
            IPI:IPI00998144 RefSeq:NP_571346.2 UniGene:Dr.88583 SMR:B0UXI2
            Ensembl:ENSDART00000138176 GeneID:30525 KEGG:dre:30525 OMA:DNIIGAA
            NextBio:20806909 Uniprot:B0UXI2
        Length = 369

 Score = 244 (91.0 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
 Identities = 44/83 (53%), Positives = 59/83 (71%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K   +K   SY +LI +AI  +P+ R+TL+EI +FI++ FPYYRE    W+NSIRHNLSL
Sbjct:    90 KNALVKPPYSYIALITMAILQSPKKRLTLSEICEFISNRFPYYREKFPAWQNSIRHNLSL 149

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             N CF K+ R   +PGKG+YW +D
Sbjct:   150 NDCFVKIPREPGNPGKGNYWTLD 172

 Score = 43 (20.2 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query:   109 PYSPVECXXXXXXXDVHNSKP-PTSISSVPNTV-SFFSDPLQ 148
             PY P          + H + P P+SI S P+++ SF    L+
Sbjct:   231 PYHPHHPGSAFPFQNTHCALPTPSSIFSTPHSLPSFLGTELR 272


>UNIPROTKB|Q6ZQN5 [details] [associations]
            symbol:FOXI2 "Forkhead box protein I2" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009957 "epidermal cell fate specification"
            evidence=IBA] [GO:0043049 "otic placode formation" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0043049 eggNOG:COG5025 GO:GO:0009957
            HOGENOM:HOG000236333 HOVERGEN:HBG067944 KO:K09401 OrthoDB:EOG457573
            EMBL:AL391005 EMBL:AK128865 IPI:IPI00400893 RefSeq:NP_997309.2
            UniGene:Hs.449674 ProteinModelPortal:Q6ZQN5 SMR:Q6ZQN5
            STRING:Q6ZQN5 PhosphoSite:Q6ZQN5 DMDM:182705226 PRIDE:Q6ZQN5
            Ensembl:ENST00000388920 GeneID:399823 KEGG:hsa:399823
            UCSC:uc009yas.2 CTD:399823 GeneCards:GC10P129535 HGNC:HGNC:32448
            neXtProt:NX_Q6ZQN5 PharmGKB:PA162388813 InParanoid:Q6ZQN5
            OMA:IYQYVAG GenomeRNAi:399823 NextBio:105603 ArrayExpress:Q6ZQN5
            Bgee:Q6ZQN5 CleanEx:HS_FOXI2 Genevestigator:Q6ZQN5 Uniprot:Q6ZQN5
        Length = 318

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 48/91 (52%), Positives = 68/91 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI +AP  ++TL++IYQ++   FP+Y+ + AGW+NSIRHNLSLN CF KV R
Sbjct:   106 SYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFKKVPR 165

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   166 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 196


>UNIPROTKB|F1SDK7 [details] [associations]
            symbol:FOXI2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00690000101636
            OMA:IYQYVAG EMBL:CU571233 Ensembl:ENSSSCT00000011764 Uniprot:F1SDK7
        Length = 328

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 48/91 (52%), Positives = 68/91 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI +AP  ++TL++IYQ++   FP+Y+ + AGW+NSIRHNLSLN CF KV R
Sbjct:   117 SYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFKKVPR 176

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   177 DEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 207


>UNIPROTKB|Q5NDM2 [details] [associations]
            symbol:foxi2-a "Forkhead box protein I2-A" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 HOVERGEN:HBG067944 KO:K09401
            EMBL:AJ868112 RefSeq:NP_001089009.1 UniGene:Xl.10052
            ProteinModelPortal:Q5NDM2 SMR:Q5NDM2 GeneID:496395 KEGG:xla:496395
            CTD:496395 Xenbase:XB-GENE-982127 Uniprot:Q5NDM2
        Length = 369

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 48/91 (52%), Positives = 66/91 (72%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY+SLI +AI N P  ++TL++IY ++   FP+Y+++ AGW+NSIRHNLSLN CF KVAR
Sbjct:   128 SYSSLIAMAIQNTPDKKLTLSQIYNYVAENFPFYKKSKAGWQNSIRHNLSLNDCFKKVAR 187

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
                DPGKG+YW +D N     D+G  ++K K
Sbjct:   188 DDHDPGKGNYWTLDPNCEKMFDNGNFRRKRK 218


>ZFIN|ZDB-GENE-040426-2437 [details] [associations]
            symbol:foxg1b "forkhead box G1b" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0021954 "central nervous system neuron development"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0030902 "hindbrain development" evidence=IBA] [GO:0035058
            "nonmotile primary cilium assembly" evidence=IBA] [GO:0009953
            "dorsal/ventral pattern formation" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0043584 "nose
            development" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0042472 "inner ear morphogenesis" evidence=IBA] [GO:0045665
            "negative regulation of neuron differentiation" evidence=IBA]
            [GO:0007346 "regulation of mitotic cell cycle" evidence=IBA]
            [GO:0002052 "positive regulation of neuroblast proliferation"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0016199 "axon midline choice point recognition"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0045787 "positive regulation of cell cycle" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-040426-2437 GO:GO:0009792 GO:GO:0007346 GO:GO:0043565
            GO:GO:0045944 GO:GO:0016199 GO:GO:0045665 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0042472 GO:GO:0003690 GO:GO:0030902 GO:GO:0009953
            GO:GO:0008134 GO:GO:0021954 GO:GO:0045787 GO:GO:0002052
            GO:GO:0051090 GO:GO:0035058 GO:GO:0043584 eggNOG:COG5025
            GO:GO:0009888 HSSP:Q01167 HOGENOM:HOG000112629 HOVERGEN:HBG051645
            GeneTree:ENSGT00700000104051 EMBL:CABZ01090073 EMBL:BC067725
            IPI:IPI00858840 RefSeq:NP_998079.2 UniGene:Dr.82660 SMR:Q6NW50
            Ensembl:ENSDART00000013642 GeneID:405850 KEGG:dre:405850 CTD:405850
            InParanoid:Q6NW50 OMA:LHHSHYN OrthoDB:EOG4NP74C NextBio:20817812
            Uniprot:Q6NW50
        Length = 333

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 50/81 (61%), Positives = 61/81 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI  +P+ R+TLN IY+FI   FPYYRE   GW+NSIRHNLSLNKCF KV R
Sbjct:    73 SYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYREHKQGWQNSIRHNLSLNKCFVKVPR 132

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
               DDPGKG+YW +D   ++DD
Sbjct:   133 HYDDPGKGNYWMLD--PSSDD 151


>UNIPROTKB|F1NP93 [details] [associations]
            symbol:FOXG1 "Forkhead box protein G1" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            IPI:IPI00581171 OMA:YSTMLTQ GeneTree:ENSGT00700000104051
            EMBL:AADN02003339 Ensembl:ENSGALT00000016016 Uniprot:F1NP93
        Length = 406

 Score = 270 (100.1 bits), Expect = 2.2e-23, P = 2.2e-23
 Identities = 50/81 (61%), Positives = 61/81 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI  +P+ R+TLN IY+FI   FPYYRE   GW+NSIRHNLSLNKCF KV R
Sbjct:   102 SYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPR 161

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
               DDPGKG+YW +D   ++DD
Sbjct:   162 HYDDPGKGNYWMLD--PSSDD 180


>UNIPROTKB|Q63ZH2 [details] [associations]
            symbol:foxi2-b "Forkhead box protein I2-B" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 HOVERGEN:HBG067944 KO:K09401
            EMBL:BC082945 RefSeq:NP_001088107.1 UniGene:Xl.7242
            ProteinModelPortal:Q63ZH2 SMR:Q63ZH2 GeneID:494806 KEGG:xla:494806
            CTD:494806 Xenbase:XB-GENE-6255082 Uniprot:Q63ZH2
        Length = 367

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 47/91 (51%), Positives = 67/91 (73%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY+SLI ++I N P  ++TL++IY ++   FP+Y+++ AGW+NSIRHNLSLN CF KVAR
Sbjct:   128 SYSSLIAMSIQNTPDKKLTLSQIYNYVAENFPFYKKSKAGWQNSIRHNLSLNDCFKKVAR 187

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
               +DPGKG+YW +D N     D+G  ++K K
Sbjct:   188 DDNDPGKGNYWTLDPNCEKMFDNGNFRRKRK 218


>ZFIN|ZDB-GENE-050419-26 [details] [associations]
            symbol:foxg1c "forkhead box G1c" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0016199 "axon midline choice point recognition" evidence=IBA]
            [GO:0042472 "inner ear morphogenesis" evidence=IBA] [GO:0043584
            "nose development" evidence=IBA] [GO:0045665 "negative regulation
            of neuron differentiation" evidence=IBA] [GO:0021954 "central
            nervous system neuron development" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0035058 "nonmotile primary cilium
            assembly" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0007346 "regulation of mitotic cell
            cycle" evidence=IBA] [GO:0030902 "hindbrain development"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0002052 "positive regulation of neuroblast proliferation"
            evidence=IBA] [GO:0009953 "dorsal/ventral pattern formation"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0045787 "positive regulation of cell cycle"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-050419-26 GO:GO:0009792 GO:GO:0007346
            GO:GO:0043565 GO:GO:0045944 GO:GO:0016199 GO:GO:0045665
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0042472 GO:GO:0003690 GO:GO:0030902
            GO:GO:0009953 GO:GO:0008134 GO:GO:0021954 GO:GO:0045787
            GO:GO:0002052 GO:GO:0051090 GO:GO:0035058 GO:GO:0043584
            GO:GO:0009888 HOVERGEN:HBG051645 GeneTree:ENSGT00700000104051
            EMBL:BX663502 IPI:IPI00612537 RefSeq:NP_001038680.1
            UniGene:Dr.154223 SMR:Q1LVK4 Ensembl:ENSDART00000139352
            GeneID:571323 KEGG:dre:571323 CTD:571323 InParanoid:Q1LVK4
            OMA:FYWPVPP NextBio:20890510 Uniprot:Q1LVK4
        Length = 379

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 50/81 (61%), Positives = 61/81 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI  +P+ R+TLN IY+FI   FPYYRE   GW+NSIRHNLSLNKCF KV R
Sbjct:    94 SYNALIMMAIRQSPERRLTLNGIYEFIMGNFPYYRENRQGWQNSIRHNLSLNKCFVKVPR 153

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
               DDPGKG+YW +D   ++DD
Sbjct:   154 HYDDPGKGNYWMLD--PSSDD 172


>ZFIN|ZDB-GENE-990415-267 [details] [associations]
            symbol:foxg1a "forkhead box G1a" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0042472 "inner ear morphogenesis" evidence=IBA] [GO:0007346
            "regulation of mitotic cell cycle" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0030902 "hindbrain development" evidence=IBA]
            [GO:0021954 "central nervous system neuron development"
            evidence=IBA] [GO:0009953 "dorsal/ventral pattern formation"
            evidence=IBA] [GO:0035058 "nonmotile primary cilium assembly"
            evidence=IBA] [GO:0016199 "axon midline choice point recognition"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0045787 "positive
            regulation of cell cycle" evidence=IBA] [GO:0045665 "negative
            regulation of neuron differentiation" evidence=IBA] [GO:0008301
            "DNA binding, bending" evidence=IBA] [GO:0002052 "positive
            regulation of neuroblast proliferation" evidence=IBA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0060059
            "embryonic retina morphogenesis in camera-type eye" evidence=IMP]
            [GO:0030182 "neuron differentiation" evidence=IMP] [GO:0043584
            "nose development" evidence=IMP] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-990415-267 GO:GO:0009792 GO:GO:0007346 GO:GO:0043565
            GO:GO:0045944 GO:GO:0016199 GO:GO:0045665 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0042472 GO:GO:0003690 GO:GO:0030902 GO:GO:0009953
            GO:GO:0008134 GO:GO:0021954 GO:GO:0045787 GO:GO:0002052
            GO:GO:0051090 GO:GO:0035058 GO:GO:0060059 GO:GO:0043584
            GO:GO:0009888 HOVERGEN:HBG051645 OMA:YSTMLTQ
            GeneTree:ENSGT00700000104051 EMBL:BX511189 EMBL:BC092710
            IPI:IPI00492072 UniGene:Dr.75832 SMR:Q568V0
            Ensembl:ENSDART00000104204 InParanoid:Q568V0 Uniprot:Q568V0
        Length = 420

 Score = 270 (100.1 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 50/81 (61%), Positives = 61/81 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI  +P+ R+TLN IY+FI   FPYYRE   GW+NSIRHNLSLNKCF KV R
Sbjct:   117 SYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPR 176

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
               DDPGKG+YW +D   ++DD
Sbjct:   177 HYDDPGKGNYWMLD--PSSDD 195


>UNIPROTKB|Q91905 [details] [associations]
            symbol:foxi1-b "Forkhead box protein I1-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0007398 "ectoderm
            development" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0048264
            "determination of ventral identity" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0007399 GO:GO:0030154
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0048264 GO:GO:0007398 HSSP:Q99958
            HOVERGEN:HBG067944 KO:K09401 EMBL:X74316 EMBL:BC078036 PIR:C56556
            PIR:S49009 RefSeq:NP_001081619.1 UniGene:Xl.34912
            ProteinModelPortal:Q91905 SMR:Q91905 GeneID:397955 KEGG:xla:397955
            CTD:397955 Xenbase:XB-GENE-6252155 Uniprot:Q91905
        Length = 367

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 47/91 (51%), Positives = 68/91 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI NA   R+TL++IYQ++   FP+Y+++ AGW+NSIRHNLSLN CF K+ R
Sbjct:   132 SYSALIAMAIQNASDKRLTLSQIYQYVAENFPFYKKSKAGWQNSIRHNLSLNDCFKKMPR 191

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              ++DPGKG+YW +D N     D+G  ++K K
Sbjct:   192 DENDPGKGNYWTLDSNCEKMFDNGNFRRKRK 222


>UNIPROTKB|F1ME43 [details] [associations]
            symbol:FOXL1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0007507 "heart development" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0007507 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 CTD:2300 KO:K09405 OMA:PFLSYFP
            EMBL:DAAA02046218 IPI:IPI00710921 RefSeq:XP_002694802.1
            RefSeq:XP_583889.1 Ensembl:ENSBTAT00000053216 GeneID:538955
            KEGG:bta:538955 NextBio:20877688 Uniprot:F1ME43
        Length = 346

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 53/123 (43%), Positives = 72/123 (58%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI +AP+ R+TLN IYQFI   FP+Y +   GW+NSIRHNLSLN CF KV R
Sbjct:    53 SYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPR 112

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVKLPRVSPYSPVECXXXXXXXDVHNSKPPTS 132
              K  PGKGSYW +D       ++G  +++ + P+  P  P E            ++ P  
Sbjct:   113 EKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGGP-EAKRVRAETQERGAEAPPE 171

Query:   133 ISS 135
             + S
Sbjct:   172 VQS 174


>UNIPROTKB|F1P7X0 [details] [associations]
            symbol:FOXI2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00690000101636
            KO:K09401 CTD:399823 OMA:IYQYVAG EMBL:AAEX03015648
            RefSeq:XP_854369.2 Ensembl:ENSCAFT00000020834 GeneID:611594
            KEGG:cfa:611594 Uniprot:F1P7X0
        Length = 320

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 48/91 (52%), Positives = 67/91 (73%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI + I +AP+ R+TL +IYQ++   FP+Y+ + AGW+NSIRHNLSLN CF KV R
Sbjct:   121 SYSALIAMPIQSAPRRRLTLCQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFKKVPR 180

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW +D N     D+G  ++K K
Sbjct:   181 EEDDPGKGNYWTLDPNCEKMFDNGNFRRKRK 211


>RGD|621739 [details] [associations]
            symbol:Foxi2 "forkhead box I2" species:10116 "Rattus norvegicus"
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;TAS] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009957 "epidermal cell fate specification"
            evidence=IBA] [GO:0043049 "otic placode formation" evidence=IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 RGD:621739
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0043049 eggNOG:COG5025
            GO:GO:0009957 HOGENOM:HOG000236333 OrthoDB:EOG457573 EMBL:L13205
            IPI:IPI00366083 PIR:I60919 UniGene:Rn.92429
            ProteinModelPortal:Q63248 SMR:Q63248 STRING:Q63248
            PhosphoSite:Q63248 PRIDE:Q63248 UCSC:RGD:621739 InParanoid:Q63248
            ArrayExpress:Q63248 Genevestigator:Q63248
            GermOnline:ENSRNOG00000018917 Uniprot:Q63248
        Length = 101

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 47/89 (52%), Positives = 67/89 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI +AP+ R+TL++IYQ++   FP+Y+   AGW+NSIRHNLSLN CF KV R
Sbjct:     7 SYSALIAMAIQSAPRRRLTLSQIYQYVAGNFPFYKRTKAGWQNSIRHNLSLNDCFKKVPR 66

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKK 101
              ++DPGKG+YW +D N     D+G  ++K
Sbjct:    67 DENDPGKGNYWMLDPNCEKMFDNGNFRRK 95


>UNIPROTKB|Q63248 [details] [associations]
            symbol:Foxi2 "Forkhead box protein I2" species:10116
            "Rattus norvegicus" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 RGD:621739 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0043049 eggNOG:COG5025 GO:GO:0009957 HOGENOM:HOG000236333
            OrthoDB:EOG457573 EMBL:L13205 IPI:IPI00366083 PIR:I60919
            UniGene:Rn.92429 ProteinModelPortal:Q63248 SMR:Q63248 STRING:Q63248
            PhosphoSite:Q63248 PRIDE:Q63248 UCSC:RGD:621739 InParanoid:Q63248
            ArrayExpress:Q63248 Genevestigator:Q63248
            GermOnline:ENSRNOG00000018917 Uniprot:Q63248
        Length = 101

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 47/89 (52%), Positives = 67/89 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI +AP+ R+TL++IYQ++   FP+Y+   AGW+NSIRHNLSLN CF KV R
Sbjct:     7 SYSALIAMAIQSAPRRRLTLSQIYQYVAGNFPFYKRTKAGWQNSIRHNLSLNDCFKKVPR 66

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKK 101
              ++DPGKG+YW +D N     D+G  ++K
Sbjct:    67 DENDPGKGNYWMLDPNCEKMFDNGNFRRK 95


>UNIPROTKB|Q9YHC5 [details] [associations]
            symbol:foxg1 "Forkhead box protein G1" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IMP] [GO:0008285 "negative regulation of
            cell proliferation" evidence=IMP] [GO:0042659 "regulation of cell
            fate specification" evidence=IMP] [GO:0045892 "negative regulation
            of transcription, DNA-dependent" evidence=IDA;IMP] [GO:0045893
            "positive regulation of transcription, DNA-dependent"
            evidence=IDA;IMP] [GO:0050768 "negative regulation of neurogenesis"
            evidence=IMP] [GO:0050769 "positive regulation of neurogenesis"
            evidence=IMP] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045892 GO:GO:0045893
            GO:GO:0008285 GO:GO:0003677 GO:GO:0008284 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0050769 GO:GO:0050768 GO:GO:0042659 HSSP:Q99958 CTD:2290
            HOVERGEN:HBG051645 KO:K09385 EMBL:AF101387 RefSeq:NP_001079165.1
            UniGene:Xl.416 ProteinModelPortal:Q9YHC5 SMR:Q9YHC5 GeneID:373732
            KEGG:xla:373732 Xenbase:XB-GENE-865339 Uniprot:Q9YHC5
        Length = 436

 Score = 270 (100.1 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 50/81 (61%), Positives = 61/81 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI  +P+ R+TLN IY+FI   FPYYRE   GW+NSIRHNLSLNKCF KV R
Sbjct:   132 SYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPR 191

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
               DDPGKG+YW +D   ++DD
Sbjct:   192 HYDDPGKGNYWMLD--PSSDD 210


>UNIPROTKB|Q9PVZ3 [details] [associations]
            symbol:foxc1-a "Forkhead box protein C1-A" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0006351 "transcription,
            DNA-dependent" evidence=IMP] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0007155 "cell
            adhesion" evidence=IMP] [GO:0007498 "mesoderm development"
            evidence=IMP] [GO:0048793 "pronephros development" evidence=IEP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0006355 GO:GO:0007498 GO:GO:0003677
            GO:GO:0043565 GO:GO:0007155 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0048793 HSSP:Q99958
            HOVERGEN:HBG051640 EMBL:AF116844 EMBL:AJ242675 EMBL:BC169731
            EMBL:BC169733 EMBL:BC170199 EMBL:BC170201 RefSeq:NP_001080937.1
            RefSeq:NP_001081683.1 UniGene:Xl.180 UniGene:Xl.34915
            ProteinModelPortal:Q9PVZ3 SMR:Q9PVZ3 GeneID:394280 GeneID:397996
            KEGG:xla:394280 KEGG:xla:397996 CTD:394280 Xenbase:XB-GENE-6252135
            Uniprot:Q9PVZ3
        Length = 492

 Score = 260 (96.6 bits), Expect = 4.0e-23, Sum P(2) = 4.0e-23
 Identities = 47/79 (59%), Positives = 57/79 (72%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NAP  ++TLN IYQFI   FP+YR+   GW+NSIRHNLSLN+CF
Sbjct:    78 VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECF 137

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW +D
Sbjct:   138 VKVPRDDKKPGKGSYWTLD 156

 Score = 33 (16.7 bits), Expect = 4.0e-23, Sum P(2) = 4.0e-23
 Identities = 11/41 (26%), Positives = 13/41 (31%)

Query:   106 RVSPYSPVECXXXXXXXDVHNSKPPTSISSVPNTVSFFSDP 146
             R SP    E              P  S+S  P   S +S P
Sbjct:   306 RGSPQGSAELPSPLISSSRTGIAPSLSLSYSPGQGSIYSSP 346


>UNIPROTKB|Q90964 [details] [associations]
            symbol:FOXG1 "Forkhead box protein G1" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0002052 "positive regulation of neuroblast proliferation"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IBA]
            [GO:0016199 "axon midline choice point recognition" evidence=IBA]
            [GO:0021954 "central nervous system neuron development"
            evidence=IBA] [GO:0030902 "hindbrain development" evidence=IBA]
            [GO:0035058 "nonmotile primary cilium assembly" evidence=IBA]
            [GO:0042472 "inner ear morphogenesis" evidence=IBA] [GO:0043584
            "nose development" evidence=IBA] [GO:0045665 "negative regulation
            of neuron differentiation" evidence=IBA] [GO:0045787 "positive
            regulation of cell cycle" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0009792 GO:GO:0007346 GO:GO:0043565 GO:GO:0045944
            GO:GO:0016199 GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0042472
            GO:GO:0003690 GO:GO:0030902 GO:GO:0009953 GO:GO:0008134
            GO:GO:0021954 GO:GO:0045787 GO:GO:0002052 GO:GO:0051090
            GO:GO:0035058 GO:GO:0043584 eggNOG:COG5025 GO:GO:0009888
            EMBL:L36814 EMBL:U47275 IPI:IPI00581171 PIR:A55909
            RefSeq:NP_990524.1 UniGene:Gga.657 ProteinModelPortal:Q90964
            SMR:Q90964 STRING:Q90964 GeneID:396110 KEGG:gga:396110 CTD:2290
            HOGENOM:HOG000112629 HOVERGEN:HBG051645 InParanoid:Q90964 KO:K09385
            OrthoDB:EOG4M0F2T NextBio:20816168 Uniprot:Q90964
        Length = 451

 Score = 270 (100.1 bits), Expect = 4.6e-23, P = 4.6e-23
 Identities = 50/81 (61%), Positives = 61/81 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI  +P+ R+TLN IY+FI   FPYYRE   GW+NSIRHNLSLNKCF KV R
Sbjct:   147 SYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPR 206

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
               DDPGKG+YW +D   ++DD
Sbjct:   207 HYDDPGKGNYWMLD--PSSDD 225


>MGI|MGI:3028075 [details] [associations]
            symbol:Foxi2 "forkhead box I2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009957 "epidermal cell fate specification" evidence=IBA]
            [GO:0043049 "otic placode formation" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 MGI:MGI:3028075 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0043049 eggNOG:COG5025
            GO:GO:0009957 HOVERGEN:HBG067944 KO:K09401 OrthoDB:EOG457573
            CTD:399823 EMBL:DQ078268 EMBL:AK045276 EMBL:BC096623
            IPI:IPI00222159 RefSeq:NP_899016.1 UniGene:Mm.132547
            ProteinModelPortal:Q3I5G5 SMR:Q3I5G5 STRING:Q3I5G5
            PhosphoSite:Q3I5G5 PRIDE:Q3I5G5 GeneID:270004 KEGG:mmu:270004
            InParanoid:Q3I5G5 NextBio:393154 Bgee:Q3I5G5 CleanEx:MM_FOXI2
            Genevestigator:Q3I5G5 Uniprot:Q3I5G5
        Length = 311

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 47/89 (52%), Positives = 67/89 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI +AP  R+TL++IYQ++   FP+Y+ + AGW+NSIRHNLSLN CF KV R
Sbjct:   103 SYSALIAMAIQSAPLRRLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFKKVPR 162

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKK 101
              ++DPGKG+YW +D N     D+G  ++K
Sbjct:   163 DENDPGKGNYWTLDPNCEKMFDNGNFRRK 191


>ZFIN|ZDB-GENE-080305-12 [details] [associations]
            symbol:zgc:175247 "zgc:175247" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-080305-12 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104051 EMBL:CABZ01084703 IPI:IPI00889384
            Ensembl:ENSDART00000102505 Bgee:F1RES1 Uniprot:F1RES1
        Length = 316

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 49/81 (60%), Positives = 61/81 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI  +P+ R+TLN IY+FI   FP+YRE   GW+NSIRHNLSLNKCF KV R
Sbjct:    66 SYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPFYREHKQGWQNSIRHNLSLNKCFVKVPR 125

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
               DDPGKG+YW +D   ++DD
Sbjct:   126 HYDDPGKGNYWMLD--PSSDD 144


>UNIPROTKB|H7C1Y6 [details] [associations]
            symbol:FOXJ3 "Forkhead box protein J3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 EMBL:AC096540 EMBL:AC114492
            HGNC:HGNC:29178 ChiTaRS:FOXJ3 ProteinModelPortal:H7C1Y6
            PRIDE:H7C1Y6 Ensembl:ENST00000454417 Bgee:H7C1Y6 Uniprot:H7C1Y6
        Length = 125

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 49/67 (73%), Positives = 57/67 (85%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYASLI  AI+++P+ +MTL+EIYQ+I   FPYYREA +GWKNSIRHNLSLNKCF KV R
Sbjct:    39 SYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFLKVPR 98

Query:    75 PKDDPGK 81
              KDDPGK
Sbjct:    99 SKDDPGK 105


>UNIPROTKB|Q12952 [details] [associations]
            symbol:FOXL1 "Forkhead box protein L1" species:9606 "Homo
            sapiens" [GO:0007507 "heart development" evidence=IMP] [GO:0008301
            "DNA binding, bending" evidence=IBA;NAS] [GO:0007275 "multicellular
            organismal development" evidence=NAS] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007420 "brain development" evidence=IBA]
            [GO:0007495 "visceral mesoderm-endoderm interaction involved in
            midgut development" evidence=ISS;IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0009887 "organ morphogenesis" evidence=ISS;IBA]
            [GO:0030111 "regulation of Wnt receptor signaling pathway"
            evidence=ISS;IBA] [GO:0030166 "proteoglycan biosynthetic process"
            evidence=ISS;IBA] [GO:0035136 "forelimb morphogenesis"
            evidence=IBA] [GO:0043010 "camera-type eye development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IC] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=NAS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0003677
            "DNA binding" evidence=IDA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0007420 GO:GO:0007507
            GO:GO:0030111 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0043010
            GO:GO:0009790 GO:GO:0009887 GO:GO:0003690 GO:GO:0051216
            GO:GO:0008134 GO:GO:0007389 GO:GO:0035136 GO:GO:0051090
            GO:GO:0030166 eggNOG:COG5025 OrthoDB:EOG4MCX19 EMBL:AC009108
            EMBL:AF315075 EMBL:BC117226 EMBL:U13225 IPI:IPI00030343 PIR:S51630
            RefSeq:NP_005241.1 UniGene:Hs.533830 ProteinModelPortal:Q12952
            SMR:Q12952 STRING:Q12952 DMDM:13638268 PRIDE:Q12952
            Ensembl:ENST00000320241 GeneID:2300 KEGG:hsa:2300 UCSC:uc002fjr.3
            CTD:2300 GeneCards:GC16P086612 HGNC:HGNC:3817 MIM:603252
            neXtProt:NX_Q12952 PharmGKB:PA28234 HOGENOM:HOG000112632
            HOVERGEN:HBG051650 InParanoid:Q12952 KO:K09405 OMA:PFLSYFP
            PhylomeDB:Q12952 GenomeRNAi:2300 NextBio:9337 Bgee:Q12952
            CleanEx:HS_FOXL1 Genevestigator:Q12952 GermOnline:ENSG00000176678
            GO:GO:0007495 Uniprot:Q12952
        Length = 345

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 50/100 (50%), Positives = 67/100 (67%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI +AP+ R+TLN IYQFI   FP+Y +   GW+NSIRHNLSLN CF KV R
Sbjct:    53 SYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPR 112

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVKLPRVSPYSP 112
              K  PGKGSYW +D       ++G  +++ + P+  P +P
Sbjct:   113 EKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAP 152


>UNIPROTKB|Q6P2Z3 [details] [associations]
            symbol:foxi1 "Forkhead box protein I1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0007398 "ectoderm development" evidence=ISS] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009957 "epidermal cell fate
            specification" evidence=IBA] [GO:0043049 "otic placode formation"
            evidence=IBA] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0048264 "determination of ventral
            identity" evidence=ISS] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0045893 GO:GO:0007399 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0048264 GO:GO:0008134
            GO:GO:0007398 GO:GO:0051090 GO:GO:0043049 eggNOG:COG5025
            GO:GO:0009957 HSSP:Q99958 GeneTree:ENSGT00690000101636
            HOGENOM:HOG000236333 HOVERGEN:HBG067944 KO:K09401 EMBL:CR761756
            EMBL:BC064241 RefSeq:NP_989265.1 UniGene:Str.16160
            ProteinModelPortal:Q6P2Z3 SMR:Q6P2Z3 STRING:Q6P2Z3
            Ensembl:ENSXETT00000004118 GeneID:394878 KEGG:xtr:394878 CTD:394878
            Xenbase:XB-GENE-487658 InParanoid:Q6P2Z3 OrthoDB:EOG457573
            Bgee:Q6P2Z3 Uniprot:Q6P2Z3
        Length = 363

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 47/91 (51%), Positives = 68/91 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI +A   R+TL++IYQ++   FP+Y+++ AGW+NSIRHNLSLN CF KV R
Sbjct:   129 SYSALIAMAIQHASDRRLTLSQIYQYVAENFPFYKKSKAGWQNSIRHNLSLNDCFKKVPR 188

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              ++DPGKG+YW +D N     D+G  ++K K
Sbjct:   189 DENDPGKGNYWTLDPNCEKMFDNGNFRRKRK 219


>UNIPROTKB|Q91904 [details] [associations]
            symbol:foxi1-a "Forkhead box protein I1-A" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=IDA] [GO:0007398
            "ectoderm development" evidence=IMP] [GO:0043565 "sequence-specific
            DNA binding" evidence=IDA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0048264
            "determination of ventral identity" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0007399 GO:GO:0030154
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0048264 GO:GO:0007398 HSSP:Q99958
            HOVERGEN:HBG067944 EMBL:X74315 EMBL:BC080044 PIR:S49008
            RefSeq:NP_001081617.1 UniGene:Xl.5369 ProteinModelPortal:Q91904
            SMR:Q91904 GeneID:397954 KEGG:xla:397954 CTD:397954
            Xenbase:XB-GENE-865722 Uniprot:Q91904
        Length = 370

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 46/91 (50%), Positives = 68/91 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI ++I NA   R+TL++IYQ++   FP+Y+++ AGW+NSIRHNLSLN CF K+ R
Sbjct:   131 SYSALIAMSIQNATDKRLTLSQIYQYVAENFPFYKKSKAGWQNSIRHNLSLNDCFKKMPR 190

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              ++DPGKG+YW +D N     D+G  ++K K
Sbjct:   191 DENDPGKGNYWTLDSNCEKMFDNGNFRRKRK 221


>RGD|2619 [details] [associations]
            symbol:Foxg1 "forkhead box G1" species:10116 "Rattus norvegicus"
          [GO:0002052 "positive regulation of neuroblast proliferation"
          evidence=ISO;IBA] [GO:0003674 "molecular_function" evidence=ND]
          [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
          "RNA polymerase II distal enhancer sequence-specific DNA binding
          transcription factor activity" evidence=IBA] [GO:0005575
          "cellular_component" evidence=ND] [GO:0005634 "nucleus" evidence=ISO]
          [GO:0005667 "transcription factor complex" evidence=IBA] [GO:0007346
          "regulation of mitotic cell cycle" evidence=ISO;IBA] [GO:0007420
          "brain development" evidence=IEP] [GO:0007568 "aging" evidence=IEP]
          [GO:0008134 "transcription factor binding" evidence=IBA] [GO:0008301
          "DNA binding, bending" evidence=IBA] [GO:0009792 "embryo development
          ending in birth or egg hatching" evidence=IBA] [GO:0009888 "tissue
          development" evidence=IBA] [GO:0009953 "dorsal/ventral pattern
          formation" evidence=ISO;IBA] [GO:0016199 "axon midline choice point
          recognition" evidence=ISO;IBA] [GO:0021954 "central nervous system
          neuron development" evidence=ISO;IBA] [GO:0022008 "neurogenesis"
          evidence=ISO] [GO:0030900 "forebrain development" evidence=IEA;ISO]
          [GO:0030902 "hindbrain development" evidence=IBA] [GO:0035058
          "nonmotile primary cilium assembly" evidence=IBA] [GO:0042472 "inner
          ear morphogenesis" evidence=ISO;IBA] [GO:0043565 "sequence-specific
          DNA binding" evidence=IEA] [GO:0043584 "nose development"
          evidence=IBA] [GO:0045665 "negative regulation of neuron
          differentiation" evidence=ISO;IBA] [GO:0045787 "positive regulation
          of cell cycle" evidence=ISO;IBA] [GO:0045892 "negative regulation of
          transcription, DNA-dependent" evidence=IEA;ISO] [GO:0045944 "positive
          regulation of transcription from RNA polymerase II promoter"
          evidence=IBA] [GO:0048667 "cell morphogenesis involved in neuron
          differentiation" evidence=ISO] [GO:0051090 "regulation of
          sequence-specific DNA binding transcription factor activity"
          evidence=IBA] [GO:2000177 "regulation of neural precursor cell
          proliferation" evidence=ISO] InterPro:IPR001766 InterPro:IPR018122
          Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
          PROSITE:PS50039 SMART:SM00339 RGD:2619 GO:GO:0009792 GO:GO:0007346
          GO:GO:0007568 GO:GO:0043565 GO:GO:0045944 GO:GO:0016199 GO:GO:0045665
          Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
          GO:GO:0008301 GO:GO:0042472 GO:GO:0003690 GO:GO:0030902 GO:GO:0009953
          GO:GO:0008134 GO:GO:0021954 GO:GO:0045787 GO:GO:0002052 GO:GO:0051090
          GO:GO:0035058 GO:GO:0043584 GO:GO:0009888 CTD:2290 HOVERGEN:HBG051645
          KO:K09385 EMBL:M87634 IPI:IPI00204255 PIR:JH0672 RefSeq:NP_036692.1
          UniGene:Rn.9864 ProteinModelPortal:Q00939 SMR:Q00939 STRING:Q00939
          PhosphoSite:Q00939 PRIDE:Q00939 GeneID:24370 KEGG:rno:24370
          UCSC:RGD:2619 eggNOG:NOG242525 NextBio:603113 Genevestigator:Q00939
          Uniprot:Q00939
        Length = 480

 Score = 270 (100.1 bits), Expect = 6.2e-23, P = 6.2e-23
 Identities = 50/81 (61%), Positives = 61/81 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI  +P+ R+TLN IY+FI   FPYYRE   GW+NSIRHNLSLNKCF KV R
Sbjct:   176 SYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPR 235

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
               DDPGKG+YW +D   ++DD
Sbjct:   236 HYDDPGKGNYWMLD--PSSDD 254


>MGI|MGI:1347464 [details] [associations]
            symbol:Foxg1 "forkhead box G1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0002052 "positive
            regulation of neuroblast proliferation" evidence=IMP] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007346 "regulation of mitotic cell
            cycle" evidence=IMP] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IMP]
            [GO:0016199 "axon midline choice point recognition" evidence=IMP]
            [GO:0021954 "central nervous system neuron development"
            evidence=IMP] [GO:0022008 "neurogenesis" evidence=IDA] [GO:0030900
            "forebrain development" evidence=IMP] [GO:0030902 "hindbrain
            development" evidence=IBA] [GO:0035058 "nonmotile primary cilium
            assembly" evidence=IBA] [GO:0042472 "inner ear morphogenesis"
            evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0043584 "nose development" evidence=IBA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
            evidence=IMP] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048667 "cell morphogenesis involved in neuron differentiation"
            evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:2000177
            "regulation of neural precursor cell proliferation" evidence=IGI]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1347464 GO:GO:0009792 GO:GO:0007346 GO:GO:0043565
            GO:GO:0045944 GO:GO:0016199 GO:GO:0030900 GO:GO:0045665
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0042472 GO:GO:0003690
            GO:GO:0030902 GO:GO:0009953 GO:GO:0008134 GO:GO:0021954
            GO:GO:0045787 GO:GO:0002052 GO:GO:0051090 GO:GO:0035058
            GO:GO:0043584 eggNOG:COG5025 GO:GO:0009888 CTD:2290
            HOGENOM:HOG000112629 HOVERGEN:HBG051645 KO:K09385 OrthoDB:EOG4M0F2T
            OMA:YSTMLTQ EMBL:U36760 EMBL:BC046958 IPI:IPI00122768
            RefSeq:NP_001153584.1 RefSeq:NP_032267.1 UniGene:Mm.4704
            ProteinModelPortal:Q60987 SMR:Q60987 STRING:Q60987
            PhosphoSite:Q60987 PRIDE:Q60987 Ensembl:ENSMUST00000021333
            Ensembl:ENSMUST00000179669 GeneID:15228 KEGG:mmu:15228
            GeneTree:ENSGT00700000104051 InParanoid:Q60987 ChiTaRS:FOXG1
            NextBio:287819 Bgee:Q60987 CleanEx:MM_FOXG1 Genevestigator:Q60987
            GermOnline:ENSMUSG00000020950 Uniprot:Q60987
        Length = 481

 Score = 270 (100.1 bits), Expect = 6.2e-23, P = 6.2e-23
 Identities = 50/81 (61%), Positives = 61/81 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI  +P+ R+TLN IY+FI   FPYYRE   GW+NSIRHNLSLNKCF KV R
Sbjct:   177 SYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPR 236

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
               DDPGKG+YW +D   ++DD
Sbjct:   237 HYDDPGKGNYWMLD--PSSDD 255


>UNIPROTKB|P55316 [details] [associations]
            symbol:FOXG1 "Forkhead box protein G1" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0007568 "aging" evidence=IEA] [GO:0030900 "forebrain
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0002052 "positive regulation of neuroblast
            proliferation" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IBA]
            [GO:0016199 "axon midline choice point recognition" evidence=IBA]
            [GO:0021954 "central nervous system neuron development"
            evidence=IBA] [GO:0030902 "hindbrain development" evidence=IBA]
            [GO:0035058 "nonmotile primary cilium assembly" evidence=IBA]
            [GO:0042472 "inner ear morphogenesis" evidence=IBA] [GO:0043584
            "nose development" evidence=IBA] [GO:0045665 "negative regulation
            of neuron differentiation" evidence=IBA] [GO:0045787 "positive
            regulation of cell cycle" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0003677 "DNA
            binding" evidence=TAS] [GO:0007420 "brain development"
            evidence=TAS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0009792 GO:GO:0007346 GO:GO:0045892
            GO:GO:0043565 GO:GO:0045944 GO:GO:0016199 GO:GO:0030900
            GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0042472 EMBL:CH471078
            GO:GO:0003690 GO:GO:0030902 GO:GO:0009953 GO:GO:0008134
            Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0021954
            GO:GO:0045787 GO:GO:0002052 GO:GO:0051090 GO:GO:0035058
            GO:GO:0043584 eggNOG:COG5025 GO:GO:0009888 CTD:2290
            HOGENOM:HOG000112629 HOVERGEN:HBG051645 KO:K09385 OrthoDB:EOG4M0F2T
            EMBL:X74142 EMBL:X74143 EMBL:X74144 EMBL:X78202 EMBL:AL049777
            EMBL:BC050072 IPI:IPI00024386 PIR:B54743 PIR:I37451
            RefSeq:NP_005240.3 UniGene:Hs.632336 UniGene:Hs.740590
            UniGene:Hs.741222 ProteinModelPortal:P55316 SMR:P55316
            IntAct:P55316 MINT:MINT-1407364 STRING:P55316 PhosphoSite:P55316
            DMDM:152031604 PaxDb:P55316 PRIDE:P55316 Ensembl:ENST00000313071
            Ensembl:ENST00000382535 GeneID:2290 KEGG:hsa:2290 UCSC:uc001wqe.3
            GeneCards:GC14P029235 HGNC:HGNC:3811 MIM:164874 MIM:613454
            neXtProt:NX_P55316 Orphanet:261229 Orphanet:261144 Orphanet:3095
            PharmGKB:PA162388806 PharmGKB:PA28228 InParanoid:P55316 OMA:YSTMLTQ
            PhylomeDB:P55316 GenomeRNAi:2290 NextBio:9307 Bgee:P55316
            CleanEx:HS_FOXG1 Genevestigator:P55316 GermOnline:ENSG00000176165
            Uniprot:P55316
        Length = 489

 Score = 270 (100.1 bits), Expect = 6.7e-23, P = 6.7e-23
 Identities = 50/81 (61%), Positives = 61/81 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI  +P+ R+TLN IY+FI   FPYYRE   GW+NSIRHNLSLNKCF KV R
Sbjct:   185 SYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPR 244

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
               DDPGKG+YW +D   ++DD
Sbjct:   245 HYDDPGKGNYWMLD--PSSDD 263


>MGI|MGI:1347469 [details] [associations]
            symbol:Foxl1 "forkhead box L1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA;TAS] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0007420 "brain development"
            evidence=IBA] [GO:0007495 "visceral mesoderm-endoderm interaction
            involved in midgut development" evidence=IMP] [GO:0007507 "heart
            development" evidence=ISO] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009887 "organ morphogenesis" evidence=IBA] [GO:0030111
            "regulation of Wnt receptor signaling pathway" evidence=IMP]
            [GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
            [GO:0035136 "forelimb morphogenesis" evidence=IBA] [GO:0043010
            "camera-type eye development" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=ISO] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0051216 "cartilage development"
            evidence=IBA] [GO:0061146 "Peyer's patch morphogenesis"
            evidence=IMP] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 MGI:MGI:1347469 GO:GO:0007420 GO:GO:0030111
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0043010
            GO:GO:0009790 GO:GO:0009887 GO:GO:0003690 GO:GO:0051216
            GO:GO:0008134 EMBL:CH466525 GO:GO:0007389 GO:GO:0035136
            GO:GO:0061146 GO:GO:0051090 GO:GO:0030166 CTD:2300
            HOVERGEN:HBG051650 KO:K09405 GO:GO:0007495 EMBL:X92498
            EMBL:BC137805 EMBL:BC137806 EMBL:X71944 IPI:IPI00138057 PIR:F47746
            RefSeq:NP_032050.2 UniGene:Mm.5111 ProteinModelPortal:Q64731
            IntAct:Q64731 PRIDE:Q64731 GeneID:14241 KEGG:mmu:14241
            NextBio:285543 CleanEx:MM_FOXL1 Genevestigator:Q64731
            Uniprot:Q64731
        Length = 336

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 50/100 (50%), Positives = 68/100 (68%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI +AP+ R+TLN IYQFI   FP+Y +   GW+NSIRHNLSLN+CF KV R
Sbjct:    53 SYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNECFVKVPR 112

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVKLPRVSPYSP 112
              K  PGKGSYW +D       ++G  +++ + P+ +  SP
Sbjct:   113 EKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPAAGSP 152


>FB|FBgn0003430 [details] [associations]
            symbol:slp1 "sloppy paired 1" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
            [GO:0007380 "specification of segmental identity, head"
            evidence=IEP;IGI;IMP] [GO:0060914 "heart formation" evidence=IMP]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IBA;IDA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA;IDA] [GO:0007379
            "segment specification" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0042305 "specification of segmental identity,
            mandibular segment" evidence=NAS] [GO:0008595 "anterior/posterior
            axis specification, embryo" evidence=NAS] [GO:0007507 "heart
            development" evidence=TAS] [GO:0007350 "blastoderm segmentation"
            evidence=TAS] [GO:0001707 "mesoderm formation" evidence=TAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0035058 "nonmotile primary cilium assembly" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0048665
            "neuron fate specification" evidence=IBA] [GO:0002052 "positive
            regulation of neuroblast proliferation" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0016199 "axon midline choice point
            recognition" evidence=IBA] [GO:0009792 "embryo development ending
            in birth or egg hatching" evidence=IBA] [GO:0007346 "regulation of
            mitotic cell cycle" evidence=IBA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0045787 "positive regulation of cell cycle" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0009953 "dorsal/ventral pattern formation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0009792 GO:GO:0007346 EMBL:AE014134 GO:GO:0008595
            GO:GO:0043565 GO:GO:0045944 GO:GO:0016199 GO:GO:0045665
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0003690 GO:GO:0001707
            GO:GO:0007366 GO:GO:0009953 GO:GO:0008134 GO:GO:0060914
            GO:GO:0048665 GO:GO:0045787 GO:GO:0002052 GO:GO:0051090
            GO:GO:0035058 eggNOG:COG5025 GO:GO:0007380 EMBL:X66095 EMBL:X66096
            RefSeq:NP_476730.1 UniGene:Dm.4659 ProteinModelPortal:P32030
            SMR:P32030 IntAct:P32030 MINT:MINT-314680 STRING:P32030
            PRIDE:P32030 GeneID:33607 KEGG:dme:Dmel_CG16738 CTD:33607
            FlyBase:FBgn0003430 InParanoid:P32030 OrthoDB:EOG4THT93
            GenomeRNAi:33607 NextBio:784418 Bgee:P32030 GermOnline:CG16738
            Uniprot:P32030
        Length = 322

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 44/74 (59%), Positives = 59/74 (79%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P+ R+TLN IYQ++ + FPY++    GW+NSIRHNLSLNKCFTK+ R
Sbjct:   124 SYNALIMMAIQDSPEQRLTLNGIYQYLINRFPYFKANKRGWQNSIRHNLSLNKCFTKIPR 183

Query:    75 PKDDPGKGSYWAID 88
               DDPGKG+YW +D
Sbjct:   184 SYDDPGKGNYWILD 197


>UNIPROTKB|Q66IG8 [details] [associations]
            symbol:foxj1.2 "Forkhead box protein J1.2" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001947 "heart looping"
            evidence=IBA] [GO:0002635 "negative regulation of germinal center
            formation" evidence=IBA] [GO:0002897 "positive regulation of
            central B cell tolerance induction" evidence=IBA] [GO:0002924
            "negative regulation of humoral immune response mediated by
            circulating immunoglobulin" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=NAS] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=NAS] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISS;NAS] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0019904 "protein domain specific binding"
            evidence=IBA] [GO:0030036 "actin cytoskeleton organization"
            evidence=IBA] [GO:0030324 "lung development" evidence=IBA]
            [GO:0030855 "epithelial cell differentiation" evidence=IBA]
            [GO:0032088 "negative regulation of NF-kappaB transcription factor
            activity" evidence=IBA] [GO:0032862 "activation of Rho GTPase
            activity" evidence=IBA] [GO:0033085 "negative regulation of T cell
            differentiation in thymus" evidence=IBA] [GO:0035089 "establishment
            of apical/basal cell polarity" evidence=IBA] [GO:0042130 "negative
            regulation of T cell proliferation" evidence=IBA] [GO:0042384
            "cilium assembly" evidence=IBA] [GO:0045409 "negative regulation of
            interleukin-6 biosynthetic process" evidence=IBA] [GO:0050869
            "negative regulation of B cell activation" evidence=IBA]
            [GO:0050900 "leukocyte migration" evidence=IBA] [GO:0060972
            "left/right pattern formation" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0019904
            GO:GO:0042130 GO:GO:0030036 GO:GO:0030324 GO:GO:0050900
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0003690 GO:GO:0042384
            GO:GO:0001947 GO:GO:0032088 GO:GO:0008134 GO:GO:0060088
            GO:GO:0030855 GO:GO:0033085 GO:GO:0032862 eggNOG:COG5025
            GO:GO:0060972 GO:GO:0002924 HSSP:Q63245 HOGENOM:HOG000112631
            HOVERGEN:HBG056832 OrthoDB:EOG40CHH5 GO:GO:0035089 GO:GO:0050869
            GO:GO:0002635 GO:GO:0045409 GO:GO:0002897
            GeneTree:ENSGT00700000104094 CTD:734957 EMBL:BC081355
            RefSeq:NP_001008143.1 UniGene:Str.5772 ProteinModelPortal:Q66IG8
            SMR:Q66IG8 Ensembl:ENSXETT00000052832 GeneID:493505 KEGG:xtr:493505
            Xenbase:XB-GENE-919738 InParanoid:Q66IG8 Bgee:Q66IG8 Uniprot:Q66IG8
        Length = 371

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 56/117 (47%), Positives = 77/117 (65%)

Query:     3 ITYKTG-NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             + Y+T  NIK   SYA+LI +A+  + Q ++TL+ IY +IT  F YYR A+  W+NSIRH
Sbjct:   100 VDYRTNANIKPPYSYATLICMAMEASQQRKLTLSAIYSWITQNFCYYRHADPSWQNSIRH 159

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAIDYNHTAD---DGPSKKKVKLPRVSPYSPVEC 115
             NLSLNKCF KV R KD+PGKG +W +D  + AD   +G  K++ ++P  S   P  C
Sbjct:   160 NLSLNKCFMKVPRGKDEPGKGGFWQMDPRY-ADMFVNGVLKRR-RMP-ASHLDPPRC 213


>ASPGD|ASPL0000072747 [details] [associations]
            symbol:mcnB species:162425 "Emericella nidulans"
            [GO:0005634 "nucleus" evidence=IDA] [GO:0045896 "regulation of
            transcription during mitosis" evidence=IEA] [GO:1900405 "regulation
            of cytokinetic cell separation by regulation of transcription from
            RNA polymerase II promoter" evidence=IEA] [GO:0097221 "MADS
            box-forkhead transcription factor complex" evidence=IEA]
            [GO:0000978 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding" evidence=IEA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0000790
            GO:GO:0003690 EMBL:BN001303 GO:GO:0008134 GO:GO:0051090
            EMBL:AACD01000163 eggNOG:COG5025 OrthoDB:EOG4XKZH6
            RefSeq:XP_682127.1 ProteinModelPortal:Q5AS72 SMR:Q5AS72
            EnsemblFungi:CADANIAT00006192 GeneID:2868407 KEGG:ani:AN8858.2
            HOGENOM:HOG000171851 OMA:WISDTFS Uniprot:Q5AS72
        Length = 717

 Score = 259 (96.2 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
 Identities = 46/74 (62%), Positives = 60/74 (81%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA+LI ++I  AP  R+TL +IY++I+ TF YY+ ++ GW+NSIRHNLSLNK F K  R
Sbjct:   209 SYATLIGMSILRAPNRRLTLAQIYRWISDTFSYYKNSDPGWQNSIRHNLSLNKAFIKQER 268

Query:    75 PKDDPGKGSYWAID 88
             PKDDPGKG+YWAI+
Sbjct:   269 PKDDPGKGNYWAIE 282

 Score = 37 (18.1 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
 Identities = 8/13 (61%), Positives = 10/13 (76%)

Query:   127 SKPPTSISSVPNT 139
             +KPP S+S  PNT
Sbjct:   517 AKPPPSVS--PNT 527


>UNIPROTKB|Q5AS72 [details] [associations]
            symbol:AN8858.2 "Putative forkhead transcription factor
            (Eurofung)" species:227321 "Aspergillus nidulans FGSC A4"
            [GO:0000790 "nuclear chromatin" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0000790 GO:GO:0003690
            EMBL:BN001303 GO:GO:0008134 GO:GO:0051090 EMBL:AACD01000163
            eggNOG:COG5025 OrthoDB:EOG4XKZH6 RefSeq:XP_682127.1
            ProteinModelPortal:Q5AS72 SMR:Q5AS72 EnsemblFungi:CADANIAT00006192
            GeneID:2868407 KEGG:ani:AN8858.2 HOGENOM:HOG000171851 OMA:WISDTFS
            Uniprot:Q5AS72
        Length = 717

 Score = 259 (96.2 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
 Identities = 46/74 (62%), Positives = 60/74 (81%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA+LI ++I  AP  R+TL +IY++I+ TF YY+ ++ GW+NSIRHNLSLNK F K  R
Sbjct:   209 SYATLIGMSILRAPNRRLTLAQIYRWISDTFSYYKNSDPGWQNSIRHNLSLNKAFIKQER 268

Query:    75 PKDDPGKGSYWAID 88
             PKDDPGKG+YWAI+
Sbjct:   269 PKDDPGKGNYWAIE 282

 Score = 37 (18.1 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
 Identities = 8/13 (61%), Positives = 10/13 (76%)

Query:   127 SKPPTSISSVPNT 139
             +KPP S+S  PNT
Sbjct:   517 AKPPPSVS--PNT 527


>UNIPROTKB|B3FNS2 [details] [associations]
            symbol:B3FNS2 "FoxG" species:7668 "Strongylocentrotus
            purpuratus" [GO:0002052 "positive regulation of neuroblast
            proliferation" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IBA]
            [GO:0016199 "axon midline choice point recognition" evidence=IBA]
            [GO:0035058 "nonmotile primary cilium assembly" evidence=IBA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IBA] [GO:0045787 "positive regulation of cell cycle"
            evidence=IBA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0009792 GO:GO:0007346
            GO:GO:0043565 GO:GO:0045944 GO:GO:0016199 GO:GO:0045665
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0009953 GO:GO:0008134
            GO:GO:0045787 GO:GO:0002052 GO:GO:0051090 GO:GO:0035058
            eggNOG:COG5025 GO:GO:0009888 KO:K09385 EMBL:EU307288
            RefSeq:NP_001123284.1 UniGene:Spu.14544 GeneID:583688
            KEGG:spu:583688 CTD:583688 Uniprot:B3FNS2
        Length = 507

 Score = 267 (99.0 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 49/81 (60%), Positives = 62/81 (76%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P+ R+TLN IY++I   FPYYRE   GW+NSIRHNLSLNKCF KV R
Sbjct:   191 SYNALIMMAIRSSPEKRLTLNGIYEYIMTNFPYYRENKQGWQNSIRHNLSLNKCFVKVPR 250

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
               DDPGKG+YW +D   ++DD
Sbjct:   251 HYDDPGKGNYWMLD--PSSDD 269


>ZFIN|ZDB-GENE-010302-2 [details] [associations]
            symbol:foxc1b "forkhead box C1b" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043114 "regulation of vascular
            permeability" evidence=IGI] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048010 "vascular endothelial growth factor receptor signaling
            pathway" evidence=IBA] [GO:0001656 "metanephros development"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0001756 "somitogenesis" evidence=IBA] [GO:0001503
            "ossification" evidence=IBA] [GO:0031490 "chromatin DNA binding"
            evidence=IBA] [GO:0048844 "artery morphogenesis" evidence=IBA]
            [GO:0048343 "paraxial mesodermal cell fate commitment"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0055010 "ventricular cardiac muscle tissue
            morphogenesis" evidence=IBA] [GO:0005667 "transcription factor
            complex" evidence=IBA] [GO:0014034 "neural crest cell fate
            commitment" evidence=IBA] [GO:0060038 "cardiac muscle cell
            proliferation" evidence=IBA] [GO:0007219 "Notch signaling pathway"
            evidence=IBA] [GO:0035050 "embryonic heart tube development"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0046620 "regulation of organ growth"
            evidence=IBA] [GO:0001946 "lymphangiogenesis" evidence=IBA]
            [GO:0001974 "blood vessel remodeling" evidence=IBA] [GO:0030199
            "collagen fibril organization" evidence=IBA] [GO:0001657 "ureteric
            bud development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0050880 "regulation of blood vessel size"
            evidence=IBA] [GO:0043010 "camera-type eye development"
            evidence=IGI] [GO:0001568 "blood vessel development" evidence=IGI]
            [GO:0001944 "vasculature development" evidence=IGI;IMP] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-010302-2 GO:GO:0043565 GO:GO:0030199 GO:GO:0045944
            GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0001756 GO:GO:0043010
            GO:GO:0001974 GO:GO:0003690 GO:GO:0001946 GO:GO:0008134
            GO:GO:0050880 GO:GO:0001503 GO:GO:0048844 GO:GO:0031490
            GO:GO:0001656 GO:GO:0001657 GO:GO:0051090 GO:GO:0046620
            GO:GO:0048010 GO:GO:0060038 GO:GO:0055010 eggNOG:COG5025
            GO:GO:0035050 HSSP:Q99958 GeneTree:ENSGT00690000101636
            HOVERGEN:HBG051640 OMA:QRIGLNN GO:GO:0014034 GO:GO:0048343
            HOGENOM:HOG000007939 OrthoDB:EOG4MCX19 EMBL:AF219950 EMBL:BX510653
            EMBL:BC046028 IPI:IPI00493033 RefSeq:NP_571804.1 UniGene:Dr.83301
            ProteinModelPortal:Q9DE24 SMR:Q9DE24 STRING:Q9DE24
            Ensembl:ENSDART00000077753 GeneID:79375 KEGG:dre:79375 CTD:79375
            InParanoid:Q9DE24 NextBio:20931552 Bgee:Q9DE24 Uniprot:Q9DE24
        Length = 433

 Score = 249 (92.7 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
 Identities = 45/79 (56%), Positives = 56/79 (70%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI N+   ++TLN IYQFI   FP+YR+   GW+NSIRHNLSLN+CF
Sbjct:    73 VKPPYSYIALITMAIQNSSDKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECF 132

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW +D
Sbjct:   133 VKVPRDDKKPGKGSYWTLD 151

 Score = 35 (17.4 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
 Identities = 7/22 (31%), Positives = 13/22 (59%)

Query:   125 HNSKPPTSISSVPNTVSFFSDP 146
             H ++ P S +++P +VS    P
Sbjct:   269 HAAELPASRAALPGSVSLTYSP 290


>UNIPROTKB|Q90WN4 [details] [associations]
            symbol:foxd2 "Forkhead box protein D2" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            KO:K09397 HSSP:Q63245 HOVERGEN:HBG051641 CTD:2306 EMBL:AJ344435
            EMBL:BC108569 RefSeq:NP_001079322.1 UniGene:Xl.12079
            ProteinModelPortal:Q90WN4 SMR:Q90WN4 GeneID:378641 KEGG:xla:378641
            Xenbase:XB-GENE-865311 Uniprot:Q90WN4
        Length = 346

 Score = 241 (89.9 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
 Identities = 43/83 (51%), Positives = 59/83 (71%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K   +K   SY +LI ++I  +P+ R+TL+EI +FI++ FPYYRE    W+NSIRHNLSL
Sbjct:    73 KNALVKPPYSYIALITMSILQSPKKRLTLSEICEFISNRFPYYREKFPAWQNSIRHNLSL 132

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             N CF K+ R   +PGKG+YW +D
Sbjct:   133 NDCFVKIPREPGNPGKGNYWTLD 155

 Score = 34 (17.0 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
 Identities = 7/19 (36%), Positives = 9/19 (47%)

Query:   129 PPTSISSVPNTVSFFSDPL 147
             PP S+ S P    F  + L
Sbjct:   229 PPASVFSSPTLSPFLGNEL 247


>UNIPROTKB|Q32NH9 [details] [associations]
            symbol:foxj1.2 "Forkhead box protein J1.2" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 HSSP:Q01167 HOVERGEN:HBG056832
            EMBL:BC108616 RefSeq:NP_001089890.1 UniGene:Xl.55428
            ProteinModelPortal:Q32NH9 SMR:Q32NH9 GeneID:734957 KEGG:xla:734957
            CTD:734957 Xenbase:XB-GENE-919747 Uniprot:Q32NH9
        Length = 370

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 55/117 (47%), Positives = 77/117 (65%)

Query:     3 ITYKTG-NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             + Y+T  N+K   SYA+LI +A+  + Q ++TL+ IY +IT  F YYR A+  W+NSIRH
Sbjct:    99 VDYRTNANVKPPYSYATLICMAMEASQQRKLTLSAIYNWITQNFCYYRHADPSWQNSIRH 158

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAIDYNHTAD---DGPSKKKVKLPRVSPYSPVEC 115
             NLSLNKCF KV R KD+PGKG +W +D  + AD   +G  K++ ++P  S   P  C
Sbjct:   159 NLSLNKCFMKVPRGKDEPGKGGFWQMDPRY-ADMFVNGVLKRR-RMPS-SHLDPPRC 212


>UNIPROTKB|Q4H3I5 [details] [associations]
            symbol:Ci-FoxI-b "Transcription factor protein"
            species:7719 "Ciona intestinalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009653 "anatomical structure morphogenesis" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0009653 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 eggNOG:COG5025 GO:GO:0009888 KO:K09401
            HOGENOM:HOG000169943 HOVERGEN:HBG086629 EMBL:AB210437
            RefSeq:NP_001071712.1 UniGene:Cin.27236 ProteinModelPortal:Q4H3I5
            SMR:Q4H3I5 GeneID:778615 KEGG:cin:778615 CTD:778615
            InParanoid:Q4H3I5 Uniprot:Q4H3I5
        Length = 466

 Score = 264 (98.0 bits), Expect = 2.5e-22, P = 2.5e-22
 Identities = 46/91 (50%), Positives = 68/91 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI N+ + ++TL+ IY ++   FP+Y+ + AGW+NSIRHNLSLN CF KVAR
Sbjct:   147 SYSALIAMAIQNSKEKKLTLSSIYLYVAENFPFYKRSRAGWQNSIRHNLSLNDCFKKVAR 206

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
              +DDPGKG+YW++D N     D+G  +++ K
Sbjct:   207 DEDDPGKGNYWSLDPNCEKMFDNGNFRRRRK 237


>UNIPROTKB|Q99958 [details] [associations]
            symbol:FOXC2 "Forkhead box protein C2" species:9606 "Homo
            sapiens" [GO:0014032 "neural crest cell development" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0072011 "glomerular endothelium development"
            evidence=IEA] [GO:0072112 "glomerular visceral epithelial cell
            differentiation" evidence=IEA] [GO:0072144 "glomerular mesangial
            cell development" evidence=IEA] [GO:0007507 "heart development"
            evidence=IMP] [GO:0007498 "mesoderm development" evidence=NAS]
            [GO:0001503 "ossification" evidence=IBA] [GO:0001569 "patterning of
            blood vessels" evidence=IBA] [GO:0001570 "vasculogenesis"
            evidence=IBA] [GO:0001656 "metanephros development" evidence=IBA]
            [GO:0001657 "ureteric bud development" evidence=IBA] [GO:0001756
            "somitogenesis" evidence=IBA] [GO:0001974 "blood vessel remodeling"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007219 "Notch signaling pathway" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0014034
            "neural crest cell fate commitment" evidence=IBA] [GO:0030199
            "collagen fibril organization" evidence=IBA] [GO:0035050 "embryonic
            heart tube development" evidence=IBA] [GO:0043010 "camera-type eye
            development" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS;IBA]
            [GO:0046620 "regulation of organ growth" evidence=IBA] [GO:0048010
            "vascular endothelial growth factor receptor signaling pathway"
            evidence=IBA] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IBA] [GO:0048703 "embryonic viscerocranium
            morphogenesis" evidence=IBA] [GO:0048844 "artery morphogenesis"
            evidence=IBA] [GO:0050880 "regulation of blood vessel size"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IBA]
            [GO:0060038 "cardiac muscle cell proliferation" evidence=IBA]
            [GO:0001946 "lymphangiogenesis" evidence=IMP] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0008286 "insulin receptor signaling pathway" evidence=IDA]
            [GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0009725 "response
            to hormone stimulus" evidence=IDA] [GO:0001077 "RNA polymerase II
            core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=IDA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0010595 "positive regulation of endothelial cell migration"
            evidence=ISS] [GO:0033630 "positive regulation of cell adhesion
            mediated by integrin" evidence=ISS] [GO:0035470 "positive
            regulation of vascular wound healing" evidence=ISS] [GO:0090050
            "positive regulation of cell migration involved in sprouting
            angiogenesis" evidence=ISS] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=ISS] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0008286
            GO:GO:0043565 GO:GO:0030199 GO:GO:0007219 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0001077
            GO:GO:0000122 GO:GO:0008301 GO:GO:0001756 GO:GO:0043010
            GO:GO:0044212 GO:GO:0001974 GO:GO:0003690 GO:GO:0072144
            GO:GO:0001946 GO:GO:0001569 GO:GO:0033630 GO:GO:0001570
            GO:GO:0008134 GO:GO:0014032 GO:GO:0050880 GO:GO:0001503
            GO:GO:0048844 GO:GO:0031490 GO:GO:0001656 GO:GO:0001657
            GO:GO:0051090 GO:GO:0046620 GO:GO:0072112 GO:GO:0048010
            GO:GO:0060038 GO:GO:0055010 GO:GO:0072011 GO:GO:0048703
            eggNOG:COG5025 KO:K09396 GO:GO:0035050 HOVERGEN:HBG051640
            GO:GO:0014034 GO:GO:0048343 HOGENOM:HOG000007939 OrthoDB:EOG4MCX19
            EMBL:Y08223 EMBL:GQ282998 EMBL:BC113437 EMBL:BC113439
            IPI:IPI00019155 RefSeq:NP_005242.1 UniGene:Hs.740701 PDB:1D5V
            PDBsum:1D5V ProteinModelPortal:Q99958 SMR:Q99958 IntAct:Q99958
            STRING:Q99958 PhosphoSite:Q99958 DMDM:3024149 PaxDb:Q99958
            PRIDE:Q99958 DNASU:2303 Ensembl:ENST00000320354 GeneID:2303
            KEGG:hsa:2303 UCSC:uc002fjq.3 CTD:2303 GeneCards:GC16P086600
            HGNC:HGNC:3801 MIM:153200 MIM:153300 MIM:153400 MIM:602402
            neXtProt:NX_Q99958 Orphanet:33001 Orphanet:662 PharmGKB:PA28218
            InParanoid:Q99958 OMA:LNHLPGH PhylomeDB:Q99958
            EvolutionaryTrace:Q99958 GenomeRNAi:2303 NextBio:9351 Bgee:Q99958
            CleanEx:HS_FOXC2 Genevestigator:Q99958 GermOnline:ENSG00000176692
            GO:GO:0090050 GO:GO:0035470 Uniprot:Q99958
        Length = 501

 Score = 264 (98.0 bits), Expect = 3.3e-22, P = 3.3e-22
 Identities = 48/79 (60%), Positives = 58/79 (73%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NAP+ ++TLN IYQFI   FP+YRE   GW+NSIRHNLSLN+CF
Sbjct:    71 VKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 130

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW +D
Sbjct:   131 VKVPRDDKKPGKGSYWTLD 149


>UNIPROTKB|F1NK01 [details] [associations]
            symbol:Gga.51501 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 EMBL:AADN02042527 EMBL:AADN02064686
            EMBL:AADN02064687 IPI:IPI00819927 Ensembl:ENSGALT00000037131
            ArrayExpress:F1NK01 Uniprot:F1NK01
        Length = 444

 Score = 262 (97.3 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 48/79 (60%), Positives = 57/79 (72%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NAP  ++TLN IYQFI   FP+YRE   GW+NSIRHNLSLN+CF
Sbjct:    38 VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 97

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW +D
Sbjct:    98 VKVPRDDKKPGKGSYWTLD 116


>UNIPROTKB|F1MVT0 [details] [associations]
            symbol:FOXC2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090050 "positive regulation of cell migration involved
            in sprouting angiogenesis" evidence=IEA] [GO:0072144 "glomerular
            mesangial cell development" evidence=IEA] [GO:0072112 "glomerular
            visceral epithelial cell differentiation" evidence=IEA] [GO:0072011
            "glomerular endothelium development" evidence=IEA] [GO:0060038
            "cardiac muscle cell proliferation" evidence=IEA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IEA]
            [GO:0050880 "regulation of blood vessel size" evidence=IEA]
            [GO:0048844 "artery morphogenesis" evidence=IEA] [GO:0048703
            "embryonic viscerocranium morphogenesis" evidence=IEA] [GO:0048343
            "paraxial mesodermal cell fate commitment" evidence=IEA]
            [GO:0048010 "vascular endothelial growth factor receptor signaling
            pathway" evidence=IEA] [GO:0046620 "regulation of organ growth"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IEA] [GO:0043010 "camera-type eye development"
            evidence=IEA] [GO:0035470 "positive regulation of vascular wound
            healing" evidence=IEA] [GO:0035050 "embryonic heart tube
            development" evidence=IEA] [GO:0033630 "positive regulation of cell
            adhesion mediated by integrin" evidence=IEA] [GO:0031490 "chromatin
            DNA binding" evidence=IEA] [GO:0030199 "collagen fibril
            organization" evidence=IEA] [GO:0014032 "neural crest cell
            development" evidence=IEA] [GO:0008286 "insulin receptor signaling
            pathway" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001974 "blood
            vessel remodeling" evidence=IEA] [GO:0001946 "lymphangiogenesis"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001657
            "ureteric bud development" evidence=IEA] [GO:0001656 "metanephros
            development" evidence=IEA] [GO:0001569 "patterning of blood
            vessels" evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
            [GO:0001077 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0008286 GO:GO:0043565 GO:GO:0030199 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003705 GO:GO:0001077
            GO:GO:0000122 GO:GO:0001756 GO:GO:0043010 GO:GO:0044212
            GO:GO:0001974 GO:GO:0072144 GO:GO:0001946 GO:GO:0001569
            GO:GO:0033630 GO:GO:0014032 GO:GO:0050880 GO:GO:0001503
            GO:GO:0048844 GO:GO:0031490 GO:GO:0001656 GO:GO:0001657
            GO:GO:0046620 GO:GO:0072112 GO:GO:0048010 GO:GO:0060038
            GO:GO:0055010 GO:GO:0072011 GO:GO:0048703 GO:GO:0035050
            GeneTree:ENSGT00690000101636 GO:GO:0048343 OMA:LNHLPGH
            GO:GO:0090050 GO:GO:0035470 EMBL:DAAA02046218 IPI:IPI00691047
            UniGene:Bt.30376 Ensembl:ENSBTAT00000016540 NextBio:20867997
            Uniprot:F1MVT0
        Length = 502

 Score = 264 (98.0 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 48/79 (60%), Positives = 58/79 (73%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NAP+ ++TLN IYQFI   FP+YRE   GW+NSIRHNLSLN+CF
Sbjct:    71 VKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 130

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW +D
Sbjct:   131 VKVPRDDKKPGKGSYWTLD 149


>RGD|621703 [details] [associations]
            symbol:Foxc2 "forkhead box C2" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0001077 "RNA polymerase
            II core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=ISO] [GO:0001501 "skeletal system
            development" evidence=ISO] [GO:0001503 "ossification"
            evidence=ISO;IBA] [GO:0001568 "blood vessel development"
            evidence=ISO] [GO:0001569 "patterning of blood vessels"
            evidence=ISO;IBA] [GO:0001570 "vasculogenesis" evidence=IBA]
            [GO:0001656 "metanephros development" evidence=ISO;IBA] [GO:0001657
            "ureteric bud development" evidence=ISO;IBA] [GO:0001756
            "somitogenesis" evidence=ISO;IBA] [GO:0001822 "kidney development"
            evidence=ISO] [GO:0001945 "lymph vessel development" evidence=ISO]
            [GO:0001946 "lymphangiogenesis" evidence=ISO;IBA] [GO:0001974
            "blood vessel remodeling" evidence=ISO;IBA] [GO:0003007 "heart
            morphogenesis" evidence=ISO] [GO:0003677 "DNA binding"
            evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=ISO;IBA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0007219 "Notch signaling pathway"
            evidence=ISO;IBA] [GO:0007507 "heart development" evidence=ISO]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008283 "cell proliferation" evidence=ISO] [GO:0008286 "insulin
            receptor signaling pathway" evidence=ISO;IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009725 "response to hormone
            stimulus" evidence=ISO] [GO:0010595 "positive regulation of
            endothelial cell migration" evidence=ISO] [GO:0014032 "neural crest
            cell development" evidence=ISO] [GO:0014034 "neural crest cell fate
            commitment" evidence=IBA] [GO:0030199 "collagen fibril
            organization" evidence=ISO;IBA] [GO:0031490 "chromatin DNA binding"
            evidence=ISO;IBA] [GO:0033630 "positive regulation of cell adhesion
            mediated by integrin" evidence=ISO] [GO:0035050 "embryonic heart
            tube development" evidence=ISO;IBA] [GO:0035470 "positive
            regulation of vascular wound healing" evidence=ISO] [GO:0043010
            "camera-type eye development" evidence=ISO;IBA] [GO:0043066
            "negative regulation of apoptotic process" evidence=ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=ISO] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISO;IBA]
            [GO:0046620 "regulation of organ growth" evidence=ISO;IBA]
            [GO:0048010 "vascular endothelial growth factor receptor signaling
            pathway" evidence=ISO;IBA] [GO:0048341 "paraxial mesoderm
            formation" evidence=ISO] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=ISO;IBA] [GO:0048701 "embryonic cranial
            skeleton morphogenesis" evidence=ISO] [GO:0048703 "embryonic
            viscerocranium morphogenesis" evidence=ISO;IBA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=ISO] [GO:0048844
            "artery morphogenesis" evidence=ISO;IBA] [GO:0050880 "regulation of
            blood vessel size" evidence=ISO;IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0055010 "ventricular cardiac muscle tissue
            morphogenesis" evidence=ISO;IBA] [GO:0060038 "cardiac muscle cell
            proliferation" evidence=ISO;IBA] [GO:0072011 "glomerular
            endothelium development" evidence=ISO] [GO:0072112 "glomerular
            visceral epithelial cell differentiation" evidence=ISO] [GO:0072144
            "glomerular mesangial cell development" evidence=ISO] [GO:0090050
            "positive regulation of cell migration involved in sprouting
            angiogenesis" evidence=ISO] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:621703 GO:GO:0008286
            GO:GO:0043565 GO:GO:0030199 GO:GO:0045944 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0001756 GO:GO:0043010 GO:GO:0001974
            GO:GO:0003690 GO:GO:0001946 GO:GO:0001569 GO:GO:0001570
            GO:GO:0008134 GO:GO:0050880 GO:GO:0001503 GO:GO:0048844
            GO:GO:0031490 GO:GO:0001656 GO:GO:0001657 GO:GO:0051090
            GO:GO:0046620 GO:GO:0048010 GO:GO:0060038 GO:GO:0055010
            GO:GO:0048703 GO:GO:0035050 GO:GO:0014034 GO:GO:0048343 EMBL:L13193
            IPI:IPI00206921 PIR:I60918 UniGene:Rn.216723
            ProteinModelPortal:Q63246 SMR:Q63246 Genevestigator:Q63246
            Uniprot:Q63246
        Length = 101

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 47/79 (59%), Positives = 57/79 (72%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +L  +AI NAP+ ++TLN IYQFI   FP+YRE   GW+NSIRHNLSLN+CF
Sbjct:     2 VKPPYSYIALSTMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 61

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW +D
Sbjct:    62 VKVPRDDKKPGKGSYWTLD 80


>ZFIN|ZDB-GENE-031126-3 [details] [associations]
            symbol:foxi3a "forkhead box I3a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0005667 "transcription factor
            complex" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0043049 "otic placode formation"
            evidence=IBA] [GO:0009913 "epidermal cell differentiation"
            evidence=IMP] [GO:0009957 "epidermal cell fate specification"
            evidence=IDA;IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0030104 "water homeostasis"
            evidence=IMP] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-031126-3 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0030104 GO:GO:0051090 GO:GO:0043049 GO:GO:0009957 HSSP:Q99958
            HOVERGEN:HBG067944 EMBL:AY331583 IPI:IPI00845088 UniGene:Dr.29102
            ProteinModelPortal:Q7T1C1 SMR:Q7T1C1 STRING:Q7T1C1 PRIDE:Q7T1C1
            InParanoid:Q7T1C1 Bgee:Q7T1C1 Uniprot:Q7T1C1
        Length = 353

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 47/91 (51%), Positives = 64/91 (70%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI +AI  AP  R+TL++IYQ++   FP+Y ++ A W+NSIRHNLSLN CF KV R
Sbjct:   120 SYSALIAMAIHGAPNRRVTLSQIYQYVADNFPFYNKSKASWQNSIRHNLSLNDCFMKVPR 179

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVK 103
                DPGKG+YW +D N     D+G  ++K K
Sbjct:   180 DDSDPGKGNYWTLDPNCEKMFDNGNFRRKRK 210


>UNIPROTKB|E2QSH3 [details] [associations]
            symbol:FOXC2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0090050 "positive regulation of cell
            migration involved in sprouting angiogenesis" evidence=IEA]
            [GO:0072144 "glomerular mesangial cell development" evidence=IEA]
            [GO:0072112 "glomerular visceral epithelial cell differentiation"
            evidence=IEA] [GO:0072011 "glomerular endothelium development"
            evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
            evidence=IEA] [GO:0055010 "ventricular cardiac muscle tissue
            morphogenesis" evidence=IEA] [GO:0050880 "regulation of blood
            vessel size" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0048703 "embryonic viscerocranium morphogenesis"
            evidence=IEA] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IEA] [GO:0048010 "vascular endothelial growth
            factor receptor signaling pathway" evidence=IEA] [GO:0046620
            "regulation of organ growth" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043010 "camera-type eye development"
            evidence=IEA] [GO:0035470 "positive regulation of vascular wound
            healing" evidence=IEA] [GO:0035050 "embryonic heart tube
            development" evidence=IEA] [GO:0033630 "positive regulation of cell
            adhesion mediated by integrin" evidence=IEA] [GO:0031490 "chromatin
            DNA binding" evidence=IEA] [GO:0030199 "collagen fibril
            organization" evidence=IEA] [GO:0014032 "neural crest cell
            development" evidence=IEA] [GO:0008286 "insulin receptor signaling
            pathway" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001974 "blood
            vessel remodeling" evidence=IEA] [GO:0001946 "lymphangiogenesis"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001657
            "ureteric bud development" evidence=IEA] [GO:0001656 "metanephros
            development" evidence=IEA] [GO:0001569 "patterning of blood
            vessels" evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
            [GO:0001077 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0008286 GO:GO:0043565 GO:GO:0030199 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003705 GO:GO:0001077
            GO:GO:0000122 GO:GO:0001756 GO:GO:0043010 GO:GO:0044212
            GO:GO:0001974 GO:GO:0072144 GO:GO:0001946 GO:GO:0001569
            GO:GO:0033630 GO:GO:0014032 GO:GO:0050880 GO:GO:0001503
            GO:GO:0048844 GO:GO:0031490 GO:GO:0001656 GO:GO:0001657
            GO:GO:0046620 GO:GO:0072112 GO:GO:0048010 GO:GO:0060038
            GO:GO:0055010 GO:GO:0072011 GO:GO:0048703 KO:K09396 GO:GO:0035050
            GeneTree:ENSGT00690000101636 GO:GO:0048343 CTD:2303 OMA:LNHLPGH
            GO:GO:0090050 GO:GO:0035470 EMBL:AAEX03003995 RefSeq:XP_860948.1
            Ensembl:ENSCAFT00000031684 GeneID:489671 KEGG:cfa:489671
            NextBio:20862823 Uniprot:E2QSH3
        Length = 505

 Score = 264 (98.0 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 48/79 (60%), Positives = 58/79 (73%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NAP+ ++TLN IYQFI   FP+YRE   GW+NSIRHNLSLN+CF
Sbjct:    71 VKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 130

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW +D
Sbjct:   131 VKVPRDDKKPGKGSYWTLD 149


>UNIPROTKB|F1NK00 [details] [associations]
            symbol:Gga.51501 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IEA] [GO:0001503
            "ossification" evidence=IEA] [GO:0001569 "patterning of blood
            vessels" evidence=IEA] [GO:0001656 "metanephros development"
            evidence=IEA] [GO:0001657 "ureteric bud development" evidence=IEA]
            [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001946
            "lymphangiogenesis" evidence=IEA] [GO:0001974 "blood vessel
            remodeling" evidence=IEA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0008286
            "insulin receptor signaling pathway" evidence=IEA] [GO:0014032
            "neural crest cell development" evidence=IEA] [GO:0030199 "collagen
            fibril organization" evidence=IEA] [GO:0031490 "chromatin DNA
            binding" evidence=IEA] [GO:0033630 "positive regulation of cell
            adhesion mediated by integrin" evidence=IEA] [GO:0035050 "embryonic
            heart tube development" evidence=IEA] [GO:0035470 "positive
            regulation of vascular wound healing" evidence=IEA] [GO:0043010
            "camera-type eye development" evidence=IEA] [GO:0043066 "negative
            regulation of apoptotic process" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0046620 "regulation of organ growth" evidence=IEA] [GO:0048010
            "vascular endothelial growth factor receptor signaling pathway"
            evidence=IEA] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IEA] [GO:0048703 "embryonic viscerocranium
            morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0050880 "regulation of blood vessel size"
            evidence=IEA] [GO:0055010 "ventricular cardiac muscle tissue
            morphogenesis" evidence=IEA] [GO:0060038 "cardiac muscle cell
            proliferation" evidence=IEA] [GO:0072011 "glomerular endothelium
            development" evidence=IEA] [GO:0072112 "glomerular visceral
            epithelial cell differentiation" evidence=IEA] [GO:0072144
            "glomerular mesangial cell development" evidence=IEA] [GO:0090050
            "positive regulation of cell migration involved in sprouting
            angiogenesis" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0008286
            GO:GO:0008283 GO:GO:0043565 GO:GO:0030199 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003705 GO:GO:0001077
            GO:GO:0000122 GO:GO:0044212 GO:GO:0033630 GO:GO:0031490
            GO:GO:0046620 GO:GO:0048010 GeneTree:ENSGT00690000101636
            OMA:LNHLPGH GO:GO:0090050 GO:GO:0035470 EMBL:AADN02042527
            EMBL:AADN02064686 EMBL:AADN02064687 IPI:IPI00592388
            Ensembl:ENSGALT00000037132 ArrayExpress:F1NK00 Uniprot:F1NK00
        Length = 467

 Score = 262 (97.3 bits), Expect = 4.2e-22, P = 4.2e-22
 Identities = 48/79 (60%), Positives = 57/79 (72%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NAP  ++TLN IYQFI   FP+YRE   GW+NSIRHNLSLN+CF
Sbjct:    72 VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 131

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW +D
Sbjct:   132 VKVPRDDKKPGKGSYWTLD 150


>UNIPROTKB|E2QSH5 [details] [associations]
            symbol:FOXL1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0007507 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 CTD:2300 KO:K09405 OMA:PFLSYFP
            EMBL:AAEX03003995 RefSeq:XP_851625.1 Ensembl:ENSCAFT00000031682
            GeneID:609291 KEGG:cfa:609291 NextBio:20894896 Uniprot:E2QSH5
        Length = 356

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 46/74 (62%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI +AP+ R+TLN IYQFI   FP+Y +   GW+NSIRHNLSLN+CF KV R
Sbjct:    53 SYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNECFVKVPR 112

Query:    75 PKDDPGKGSYWAID 88
              K  PGKGSYW +D
Sbjct:   113 EKGRPGKGSYWTLD 126


>UNIPROTKB|Q68F77 [details] [associations]
            symbol:foxc1 "Forkhead box protein C1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001503 "ossification"
            evidence=IBA] [GO:0001541 "ovarian follicle development"
            evidence=IBA] [GO:0001570 "vasculogenesis" evidence=IBA]
            [GO:0001656 "metanephros development" evidence=IBA] [GO:0001657
            "ureteric bud development" evidence=IBA] [GO:0001756
            "somitogenesis" evidence=IBA] [GO:0001946 "lymphangiogenesis"
            evidence=IBA] [GO:0001974 "blood vessel remodeling" evidence=IBA]
            [GO:0003677 "DNA binding" evidence=ISS] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0007155 "cell adhesion"
            evidence=ISS] [GO:0007219 "Notch signaling pathway" evidence=IBA]
            [GO:0007420 "brain development" evidence=IBA] [GO:0007498 "mesoderm
            development" evidence=ISS] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0008354 "germ cell migration" evidence=IBA]
            [GO:0014034 "neural crest cell fate commitment" evidence=IBA]
            [GO:0030199 "collagen fibril organization" evidence=IBA]
            [GO:0030203 "glycosaminoglycan metabolic process" evidence=IBA]
            [GO:0031490 "chromatin DNA binding" evidence=IBA] [GO:0032808
            "lacrimal gland development" evidence=IBA] [GO:0035050 "embryonic
            heart tube development" evidence=IBA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IBA] [GO:0043010 "camera-type eye
            development" evidence=IBA] [GO:0045930 "negative regulation of
            mitotic cell cycle" evidence=IBA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0046620 "regulation of organ growth" evidence=IBA] [GO:0048010
            "vascular endothelial growth factor receptor signaling pathway"
            evidence=IBA] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IBA] [GO:0048793 "pronephros development"
            evidence=ISS] [GO:0048844 "artery morphogenesis" evidence=IBA]
            [GO:0050880 "regulation of blood vessel size" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IBA]
            [GO:0060038 "cardiac muscle cell proliferation" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0007420 GO:GO:0043565 GO:GO:0030199 GO:GO:0045944
            GO:GO:0007155 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0001756
            GO:GO:0043010 GO:GO:0001974 GO:GO:0003690 GO:GO:0001541
            GO:GO:0001946 GO:GO:0001570 GO:GO:0042475 GO:GO:0008134
            GO:GO:0050880 GO:GO:0001503 GO:GO:0048844 GO:GO:0031490
            GO:GO:0001656 GO:GO:0001657 GO:GO:0051090 GO:GO:0046620
            GO:GO:0048010 GO:GO:0045930 GO:GO:0060038 GO:GO:0055010
            GO:GO:0048793 GO:GO:0030203 eggNOG:COG5025 KO:K09396 GO:GO:0035050
            GO:GO:0008354 GeneTree:ENSGT00690000101636 GO:GO:0032808 CTD:2296
            HOVERGEN:HBG051640 GO:GO:0014034 GO:GO:0048343 HOGENOM:HOG000007939
            EMBL:BC079966 RefSeq:NP_001007864.1 UniGene:Str.6156
            ProteinModelPortal:Q68F77 SMR:Q68F77 Ensembl:ENSXETT00000001313
            GeneID:493250 KEGG:xtr:493250 Xenbase:XB-GENE-479055
            InParanoid:Q68F77 OrthoDB:EOG4MCX19 Bgee:Q68F77 Uniprot:Q68F77
        Length = 495

 Score = 262 (97.3 bits), Expect = 5.3e-22, P = 5.3e-22
 Identities = 47/79 (59%), Positives = 58/79 (73%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NAP+ ++TLN IYQFI   FP+YR+   GW+NSIRHNLSLN+CF
Sbjct:    78 VKPPYSYIALITMAIQNAPEKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECF 137

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW +D
Sbjct:   138 VKVPRDDKKPGKGSYWTLD 156


>UNIPROTKB|Q1PA44 [details] [associations]
            symbol:FoxA "Uncharacterized protein" species:7668
            "Strongylocentrotus purpuratus" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0019904 "protein domain specific
            binding" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048513 "organ development" evidence=IBA] [GO:0048665 "neuron
            fate specification" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0019904 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0048665 GO:GO:0051090 GO:GO:0048513 eggNOG:COG5025
            GO:GO:0009888 InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
            KO:K09387 EMBL:DQ459376 RefSeq:NP_001073010.1 UniGene:Spu.1709
            ProteinModelPortal:Q1PA44 SMR:Q1PA44 EnsemblMetazoa:SPU_006676tr
            GeneID:578584 KEGG:spu:578584 CTD:30539 OMA:ANSAMIS Uniprot:Q1PA44
        Length = 440

 Score = 245 (91.3 bits), Expect = 5.4e-22, Sum P(2) = 5.4e-22
 Identities = 54/141 (38%), Positives = 76/141 (53%)

Query:     4 TYKTG--NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             TY+    + K   SY SLI +AI  +PQ  +TL++IYQFI   FP+YR+    W+NSIRH
Sbjct:   135 TYRRSYTHAKPPYSYISLITMAIQQSPQKMVTLSDIYQFIMDLFPFYRQNQQRWQNSIRH 194

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAI--DYNHTADDG---PSKKKVKLPRVSPYSPVECX 116
             +LS N CF KV R  D PGKGS+W +  D  +  ++G     +K+ K P+       +  
Sbjct:   195 SLSFNDCFVKVPRTPDRPGKGSFWTLHPDAGNMFENGCYLRRQKRFKCPKKEAQRLAQKA 254

Query:   117 XXXXXXDVHNSKPPTSISSVP 137
                    + N +P T   S P
Sbjct:   255 AGDDGQPIENGEPNTRDPSTP 275

 Score = 35 (17.4 bits), Expect = 5.4e-22, Sum P(2) = 5.4e-22
 Identities = 7/14 (50%), Positives = 8/14 (57%)

Query:   125 HNSKPPTSISSVPN 138
             H   PP S+SS  N
Sbjct:   322 HQLSPPHSMSSYAN 335


>UNIPROTKB|F1S6I8 [details] [associations]
            symbol:FOXL1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0007507 "heart development" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0007507 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 KO:K09405 OMA:PFLSYFP EMBL:FP102684
            RefSeq:XP_003126859.1 Ensembl:ENSSSCT00000002949 GeneID:100511634
            KEGG:ssc:100511634 Uniprot:F1S6I8
        Length = 338

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 49/100 (49%), Positives = 66/100 (66%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI +AP  R+TL+ IYQFI   FP+Y +   GW+NSIRHNLSLN CF KV R
Sbjct:    53 SYIALIAMAIQDAPGQRVTLSGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPR 112

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVKLPRVSPYSP 112
              K  PGKGSYW +D       ++G  +++ + P+  P +P
Sbjct:   113 EKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAP 152


>WB|WBGene00001434 [details] [associations]
            symbol:fkh-2 species:6239 "Caenorhabditis elegans"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA;IMP] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0040017 "positive
            regulation of locomotion" evidence=IMP] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IGI;IMP]
            [GO:0002119 "nematode larval development" evidence=IGI] [GO:0005634
            "nucleus" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0035058 "nonmotile primary cilium assembly" evidence=IMP]
            [GO:0016358 "dendrite development" evidence=IMP] [GO:0048665
            "neuron fate specification" evidence=IMP] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0009792
            GO:GO:0007346 GO:GO:0002119 GO:GO:0043565 GO:GO:0045944
            GO:GO:0016199 GO:GO:0016358 GO:GO:0045665 GO:GO:0040017
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0009953 GO:GO:0008134
            GO:GO:0009880 GO:GO:0048665 GO:GO:0045787 GO:GO:0002052
            GO:GO:0051090 GO:GO:0035058 eggNOG:COG5025 GO:GO:0009888
            HSSP:Q99958 KO:K09385 GeneTree:ENSGT00700000104051 EMBL:FO080253
            PIR:T16880 RefSeq:NP_508644.1 ProteinModelPortal:Q22510 SMR:Q22510
            DIP:DIP-25543N IntAct:Q22510 MINT:MINT-1074755 STRING:Q22510
            EnsemblMetazoa:T14G12.4a GeneID:180663 KEGG:cel:CELE_T14G12.4
            UCSC:T14G12.4a CTD:180663 WormBase:T14G12.4a HOGENOM:HOG000020237
            InParanoid:Q22510 OMA:ARMDAYK NextBio:910344 ArrayExpress:Q22510
            Uniprot:Q22510
        Length = 270

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 49/92 (53%), Positives = 65/92 (70%)

Query:     4 TYKTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNL 63
             T  + N K   SY +LI +AI ++P+ R+TL  IY++I   +P+YR+   GW+NSIRHNL
Sbjct:    86 TPSSPNDKPPFSYNALIMMAIKDSPEKRLTLAGIYEYIVTNYPFYRDNKQGWQNSIRHNL 145

Query:    64 SLNKCFTKVARPKDDPGKGSYWAIDYNHTADD 95
             SLNKCF KV R  DDPGKG+YW +D   TA+D
Sbjct:   146 SLNKCFVKVPRNFDDPGKGNYWMLDA--TAED 175


>UNIPROTKB|Q22510 [details] [associations]
            symbol:fkh-2 "Protein FKH-2, isoform a" species:6239
            "Caenorhabditis elegans" [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0045787 "positive regulation of cell cycle"
            evidence=IBA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IBA] [GO:0016199 "axon midline choice
            point recognition" evidence=IBA] [GO:0009953 "dorsal/ventral
            pattern formation" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0009880 "embryonic pattern specification"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0007346 "regulation of mitotic cell cycle" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0002052
            "positive regulation of neuroblast proliferation" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0009792 GO:GO:0007346 GO:GO:0002119 GO:GO:0043565
            GO:GO:0045944 GO:GO:0016199 GO:GO:0016358 GO:GO:0045665
            GO:GO:0040017 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0003690 GO:GO:0009953
            GO:GO:0008134 GO:GO:0009880 GO:GO:0048665 GO:GO:0045787
            GO:GO:0002052 GO:GO:0051090 GO:GO:0035058 eggNOG:COG5025
            GO:GO:0009888 HSSP:Q99958 KO:K09385 GeneTree:ENSGT00700000104051
            EMBL:FO080253 PIR:T16880 RefSeq:NP_508644.1
            ProteinModelPortal:Q22510 SMR:Q22510 DIP:DIP-25543N IntAct:Q22510
            MINT:MINT-1074755 STRING:Q22510 EnsemblMetazoa:T14G12.4a
            GeneID:180663 KEGG:cel:CELE_T14G12.4 UCSC:T14G12.4a CTD:180663
            WormBase:T14G12.4a HOGENOM:HOG000020237 InParanoid:Q22510
            OMA:ARMDAYK NextBio:910344 ArrayExpress:Q22510 Uniprot:Q22510
        Length = 270

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 49/92 (53%), Positives = 65/92 (70%)

Query:     4 TYKTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNL 63
             T  + N K   SY +LI +AI ++P+ R+TL  IY++I   +P+YR+   GW+NSIRHNL
Sbjct:    86 TPSSPNDKPPFSYNALIMMAIKDSPEKRLTLAGIYEYIVTNYPFYRDNKQGWQNSIRHNL 145

Query:    64 SLNKCFTKVARPKDDPGKGSYWAIDYNHTADD 95
             SLNKCF KV R  DDPGKG+YW +D   TA+D
Sbjct:   146 SLNKCFVKVPRNFDDPGKGNYWMLDA--TAED 175


>FB|FBgn0004567 [details] [associations]
            symbol:slp2 "sloppy paired 2" species:7227 "Drosophila
            melanogaster" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=NAS] [GO:0007365 "periodic
            partitioning" evidence=NAS] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0051090 "regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0007380 "specification of segmental identity,
            head" evidence=IBA] [GO:0016199 "axon midline choice point
            recognition" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0009792 "embryo development ending in
            birth or egg hatching" evidence=IBA] [GO:0009953 "dorsal/ventral
            pattern formation" evidence=IBA] [GO:0002052 "positive regulation
            of neuroblast proliferation" evidence=IBA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0035058 "nonmotile primary cilium assembly"
            evidence=IBA] [GO:0045787 "positive regulation of cell cycle"
            evidence=IBA] [GO:0048665 "neuron fate specification" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0009792 GO:GO:0007346 EMBL:AE014134 GO:GO:0043565
            GO:GO:0045944 GO:GO:0016199 GO:GO:0045665 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0007367 GO:GO:0009953 GO:GO:0008134
            GO:GO:0048665 GO:GO:0045787 GO:GO:0002052 GO:GO:0051090
            GO:GO:0035058 eggNOG:COG5025 GO:GO:0007380 GO:GO:0009888 KO:K09385
            EMBL:X66098 EMBL:X66097 PIR:S23055 PIR:S23056 RefSeq:NP_476834.1
            UniGene:Dm.3388 ProteinModelPortal:P32031 SMR:P32031 STRING:P32031
            PaxDb:P32031 GeneID:33608 KEGG:dme:Dmel_CG2939 CTD:33608
            FlyBase:FBgn0004567 InParanoid:P32031 OrthoDB:EOG4Q575K
            GenomeRNAi:33608 NextBio:784423 Uniprot:P32031
        Length = 445

 Score = 259 (96.2 bits), Expect = 7.4e-22, P = 7.4e-22
 Identities = 48/83 (57%), Positives = 59/83 (71%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K GN K   SY +LI +AI  + + R+TLN IY++I    PYYR+   GW+NSIRHNLSL
Sbjct:   175 KKGNEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSL 234

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             NKCF KV R  DDPGKG+YW +D
Sbjct:   235 NKCFVKVPRHYDDPGKGNYWMLD 257


>UNIPROTKB|Q32NP8 [details] [associations]
            symbol:foxc1-b "Forkhead box protein C1-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0006351 "transcription,
            DNA-dependent" evidence=ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0007155 "cell
            adhesion" evidence=ISS] [GO:0007498 "mesoderm development"
            evidence=ISS] [GO:0048793 "pronephros development" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0006355 GO:GO:0007498 GO:GO:0003677
            GO:GO:0043565 GO:GO:0007155 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0048793 KO:K09396
            HOVERGEN:HBG051640 EMBL:BC108535 RefSeq:NP_001089846.1
            UniGene:Xl.76079 ProteinModelPortal:Q32NP8 SMR:Q32NP8 GeneID:734912
            KEGG:xla:734912 CTD:734912 Xenbase:XB-GENE-865236 Uniprot:Q32NP8
        Length = 495

 Score = 260 (96.6 bits), Expect = 8.8e-22, P = 8.8e-22
 Identities = 47/79 (59%), Positives = 57/79 (72%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NAP  ++TLN IYQFI   FP+YR+   GW+NSIRHNLSLN+CF
Sbjct:    78 VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECF 137

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW +D
Sbjct:   138 VKVPRDDKKPGKGSYWTLD 156


>UNIPROTKB|Q5M7N6 [details] [associations]
            symbol:foxj1 "Forkhead box protein J1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001947 "heart looping"
            evidence=IBA] [GO:0002635 "negative regulation of germinal center
            formation" evidence=IBA] [GO:0002897 "positive regulation of
            central B cell tolerance induction" evidence=IBA] [GO:0002924
            "negative regulation of humoral immune response mediated by
            circulating immunoglobulin" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0019904 "protein domain specific binding" evidence=IBA]
            [GO:0030036 "actin cytoskeleton organization" evidence=IBA]
            [GO:0030324 "lung development" evidence=IBA] [GO:0030855
            "epithelial cell differentiation" evidence=IBA] [GO:0032088
            "negative regulation of NF-kappaB transcription factor activity"
            evidence=IBA] [GO:0032862 "activation of Rho GTPase activity"
            evidence=IBA] [GO:0033085 "negative regulation of T cell
            differentiation in thymus" evidence=IBA] [GO:0035089 "establishment
            of apical/basal cell polarity" evidence=IBA] [GO:0042130 "negative
            regulation of T cell proliferation" evidence=IBA] [GO:0042384
            "cilium assembly" evidence=IBA] [GO:0045409 "negative regulation of
            interleukin-6 biosynthetic process" evidence=IBA] [GO:0050869
            "negative regulation of B cell activation" evidence=IBA]
            [GO:0050900 "leukocyte migration" evidence=IBA] [GO:0060972
            "left/right pattern formation" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0019904
            GO:GO:0042130 GO:GO:0030036 GO:GO:0030324 GO:GO:0050900
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0003690 GO:GO:0042384
            GO:GO:0001947 GO:GO:0032088 GO:GO:0008134 GO:GO:0030855
            GO:GO:0033085 GO:GO:0032862 eggNOG:COG5025 GO:GO:0060972
            GO:GO:0002924 HSSP:Q01167 CTD:2302 HOGENOM:HOG000112631
            HOVERGEN:HBG056832 KO:K09402 OrthoDB:EOG40CHH5 GO:GO:0035089
            GO:GO:0050869 GO:GO:0002635 GO:GO:0045409 GO:GO:0002897
            EMBL:CR759983 EMBL:BC088533 RefSeq:NP_001011367.1 UniGene:Str.533
            ProteinModelPortal:Q5M7N6 SMR:Q5M7N6 STRING:Q5M7N6 GeneID:496834
            KEGG:xtr:496834 Xenbase:XB-GENE-853648 InParanoid:Q5M7N6
            Uniprot:Q5M7N6
        Length = 438

 Score = 258 (95.9 bits), Expect = 8.9e-22, P = 8.9e-22
 Identities = 58/135 (42%), Positives = 80/135 (59%)

Query:     3 ITYKTG-NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             I YKT  ++K   SYA+LI +A+  + + ++TL+ IY++IT  F Y+R A+  W+NSIRH
Sbjct:   114 IDYKTNPHVKPPYSYATLICMAMQASKKTKITLSAIYKWITDNFCYFRHADPTWQNSIRH 173

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAID--YNHTADDGPSKKKVKLPRVSPYSPVECXXXX 119
             NLSLNKCF KV R KD+PGKG +W ID  Y     +G  KK+ +LP V  + P       
Sbjct:   174 NLSLNKCFIKVPREKDEPGKGGFWKIDPQYADRLMNGAMKKR-RLPPVQIH-PAFASAQA 231

Query:   120 XXXDVHNSKPPTSIS 134
                   N   P  +S
Sbjct:   232 AASGNSNRGSPWQLS 246


>ZFIN|ZDB-GENE-040426-1181 [details] [associations]
            symbol:foxl1 "forkhead box L1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0009887 "organ
            morphogenesis" evidence=IBA] [GO:0030166 "proteoglycan biosynthetic
            process" evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0030111 "regulation of
            Wnt receptor signaling pathway" evidence=IBA] [GO:0007495 "visceral
            mesoderm-endoderm interaction involved in midgut development"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0007420 "brain development"
            evidence=IMP] [GO:0043010 "camera-type eye development"
            evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
            [GO:0035138 "pectoral fin morphogenesis" evidence=IMP] [GO:0005634
            "nucleus" evidence=IEA;IC] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 ZFIN:ZDB-GENE-040426-1181
            GO:GO:0045892 GO:GO:0007420 GO:GO:0030111 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0043010 GO:GO:0009790 GO:GO:0009887
            GO:GO:0003690 GO:GO:0051216 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0030166 HSSP:Q99958 CTD:2300
            HOGENOM:HOG000112632 HOVERGEN:HBG051650 KO:K09405 GO:GO:0007495
            GO:GO:0035138 EMBL:BC055156 IPI:IPI00495121 RefSeq:NP_957278.1
            UniGene:Dr.15390 ProteinModelPortal:Q7SY22 SMR:Q7SY22 STRING:Q7SY22
            GeneID:393959 KEGG:dre:393959 InParanoid:Q7SY22 NextBio:20814930
            ArrayExpress:Q7SY22 Bgee:Q7SY22 Uniprot:Q7SY22
        Length = 363

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 47/74 (63%), Positives = 53/74 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI NAP  R TL+ IYQFI   FPYY +   GW+NSIRHNLSLN CF KV R
Sbjct:    56 SYIALIAMAIKNAPDKRATLSGIYQFIMDRFPYYHDNKQGWQNSIRHNLSLNDCFIKVPR 115

Query:    75 PKDDPGKGSYWAID 88
              K  PGKGSYW +D
Sbjct:   116 EKGRPGKGSYWTLD 129


>UNIPROTKB|Q708W1 [details] [associations]
            symbol:foxj1-b "Forkhead box protein J1-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=ISS;NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            HSSP:Q01167 HOVERGEN:HBG056832 KO:K09402 EMBL:AJ609391
            RefSeq:NP_001083644.1 UniGene:Xl.1396 ProteinModelPortal:Q708W1
            SMR:Q708W1 GeneID:399038 KEGG:xla:399038 CTD:399038
            Xenbase:XB-GENE-856300 Uniprot:Q708W1
        Length = 439

 Score = 257 (95.5 bits), Expect = 1.2e-21, P = 1.2e-21
 Identities = 54/108 (50%), Positives = 74/108 (68%)

Query:     3 ITYKTG-NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             I YKT  ++K   SYA+LI +A+  + + ++TL+ IY++IT  F Y+R A+  W+NSIRH
Sbjct:   115 IDYKTNPHVKPPYSYATLICMAMQASKKTKITLSAIYKWITDNFCYFRHADPTWQNSIRH 174

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAID--YNHTADDGPSKKKVKLPRV 107
             NLSLNKCF KV R KD+PGKG +W ID  Y     +G  KK+ +LP V
Sbjct:   175 NLSLNKCFIKVPREKDEPGKGGFWKIDPQYADRLMNGAMKKR-RLPPV 221


>FB|FBgn0014143 [details] [associations]
            symbol:croc "crocodile" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007380
            "specification of segmental identity, head" evidence=NAS;IMP]
            [GO:0003677 "DNA binding" evidence=NAS;IDA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0009653 "anatomical structure
            morphogenesis" evidence=IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            EMBL:AE014296 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0003690
            GO:GO:0008134 GO:GO:0009653 GO:GO:0051090 GO:GO:0048513 EMBL:S80254
            EMBL:M96440 PIR:S59870 RefSeq:NP_524202.1 UniGene:Dm.5749
            ProteinModelPortal:P32027 SMR:P32027 STRING:P32027 PRIDE:P32027
            EnsemblMetazoa:FBtr0078395 GeneID:40374 KEGG:dme:Dmel_CG5069
            CTD:40374 FlyBase:FBgn0014143 eggNOG:COG5025
            GeneTree:ENSGT00700000104475 InParanoid:P32027 KO:K09396
            OMA:WYTPETP PhylomeDB:P32027 GenomeRNAi:40374 NextBio:818451
            Bgee:P32027 GermOnline:CG5069 GO:GO:0007380 GO:GO:0009888
            Uniprot:P32027
        Length = 508

 Score = 259 (96.2 bits), Expect = 1.2e-21, P = 1.2e-21
 Identities = 51/90 (56%), Positives = 62/90 (68%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NA   ++TLN IYQ+I   FPYYR+   GW+NSIRHNLSLN+CF
Sbjct:    69 VKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECF 128

Query:    70 TKVARPKDDPGKGSYWAID---YNHTADDG 96
              KVAR    PGKGSYW +D   YN   D+G
Sbjct:   129 VKVARDDKKPGKGSYWTLDPDSYN-MFDNG 157


>UNIPROTKB|Q708W2 [details] [associations]
            symbol:foxj1-a "Forkhead box protein J1-A" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=ISS;NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            HSSP:Q01167 HOVERGEN:HBG056832 KO:K09402 EMBL:AJ609390
            EMBL:BC077846 RefSeq:NP_001083646.1 UniGene:Xl.34501
            ProteinModelPortal:Q708W2 SMR:Q708W2 GeneID:399039 KEGG:xla:399039
            CTD:399039 Xenbase:XB-GENE-6254646 Uniprot:Q708W2
        Length = 439

 Score = 256 (95.2 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 54/108 (50%), Positives = 73/108 (67%)

Query:     3 ITYKTG-NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             I YKT  ++K   SYA+LI +A+  + + ++TL+ IY +IT  F Y+R A+  W+NSIRH
Sbjct:   115 IDYKTNPHVKPPYSYATLICMAMQASKKTKITLSAIYNWITDNFCYFRHADPTWQNSIRH 174

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAID--YNHTADDGPSKKKVKLPRV 107
             NLSLNKCF KV R KD+PGKG +W ID  Y     +G  KK+ +LP V
Sbjct:   175 NLSLNKCFMKVPREKDEPGKGGFWKIDPQYADRLINGAMKKR-RLPPV 221


>UNIPROTKB|Q12948 [details] [associations]
            symbol:FOXC1 "Forkhead box protein C1" species:9606 "Homo
            sapiens" [GO:0001501 "skeletal system development" evidence=IEA]
            [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0014032 "neural crest cell development" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
            tooth" evidence=IMP] [GO:0001503 "ossification" evidence=IBA]
            [GO:0001541 "ovarian follicle development" evidence=IBA]
            [GO:0001570 "vasculogenesis" evidence=IBA] [GO:0001656 "metanephros
            development" evidence=IBA] [GO:0001657 "ureteric bud development"
            evidence=IBA] [GO:0001756 "somitogenesis" evidence=IBA] [GO:0001946
            "lymphangiogenesis" evidence=IBA] [GO:0001974 "blood vessel
            remodeling" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007219 "Notch signaling pathway" evidence=IBA]
            [GO:0007420 "brain development" evidence=IBA] [GO:0008354 "germ
            cell migration" evidence=IBA] [GO:0014034 "neural crest cell fate
            commitment" evidence=IBA] [GO:0030199 "collagen fibril
            organization" evidence=IBA] [GO:0030203 "glycosaminoglycan
            metabolic process" evidence=IBA] [GO:0031490 "chromatin DNA
            binding" evidence=IBA] [GO:0032808 "lacrimal gland development"
            evidence=IBA] [GO:0035050 "embryonic heart tube development"
            evidence=IBA] [GO:0043010 "camera-type eye development"
            evidence=IBA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS;IDA;IBA] [GO:0046620
            "regulation of organ growth" evidence=IBA] [GO:0048010 "vascular
            endothelial growth factor receptor signaling pathway" evidence=IBA]
            [GO:0048343 "paraxial mesodermal cell fate commitment"
            evidence=IBA] [GO:0048844 "artery morphogenesis" evidence=IBA]
            [GO:0050880 "regulation of blood vessel size" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IBA]
            [GO:0060038 "cardiac muscle cell proliferation" evidence=IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0045930 "negative regulation of mitotic
            cell cycle" evidence=IDA] [GO:0005634 "nucleus" evidence=IC;IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA;NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0008134 "transcription factor binding"
            evidence=IPI] [GO:0008301 "DNA binding, bending" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0005720 "nuclear
            heterochromatin" evidence=IDA] [GO:0001654 "eye development"
            evidence=IDA] [GO:0007507 "heart development" evidence=IDA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005737 GO:GO:0007420
            GO:GO:0043565 GO:GO:0001701 GO:GO:0005720 GO:GO:0030199
            GO:GO:0045944 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0001756
            GO:GO:0043010 GO:GO:0044212 GO:GO:0001501 GO:GO:0001974
            GO:GO:0003690 GO:GO:0001541 GO:GO:0001946 GO:GO:0001570
            GO:GO:0042475 GO:GO:0014032 GO:GO:0050880 GO:GO:0001503
            GO:GO:0048844 GO:GO:0031490 GO:GO:0001656 GO:GO:0001657
            GO:GO:0051090 GO:GO:0046620 GO:GO:0048010 GO:GO:0045930
            GO:GO:0060038 GO:GO:0055010 GO:GO:0030203 MIM:604229 Orphanet:708
            eggNOG:COG5025 KO:K09396 GO:GO:0035050 GO:GO:0008354 GO:GO:0032808
            EMBL:AF048693 EMBL:AF078096 EMBL:AY228704 EMBL:AL034344 EMBL:L12143
            EMBL:U13221 IPI:IPI00290377 PIR:S51626 RefSeq:NP_001444.2
            UniGene:Hs.348883 ProteinModelPortal:Q12948 SMR:Q12948
            IntAct:Q12948 STRING:Q12948 PhosphoSite:Q12948 DMDM:13638267
            PaxDb:Q12948 PRIDE:Q12948 Ensembl:ENST00000380874 GeneID:2296
            KEGG:hsa:2296 UCSC:uc003mtp.3 CTD:2296 GeneCards:GC06P001610
            H-InvDB:HIX0032962 HGNC:HGNC:3800 HPA:HPA040670 MIM:601090
            MIM:601631 MIM:602482 neXtProt:NX_Q12948 Orphanet:98978
            Orphanet:782 Orphanet:91483 PharmGKB:PA28217 HOVERGEN:HBG051640
            InParanoid:Q12948 OMA:QRIGLNN OrthoDB:EOG479F8T PhylomeDB:Q12948
            GenomeRNAi:2296 NextBio:9319 ArrayExpress:Q12948 Bgee:Q12948
            CleanEx:HS_FOXC1 Genevestigator:Q12948 GermOnline:ENSG00000054598
            GO:GO:0014034 GO:GO:0048343 Uniprot:Q12948
        Length = 553

 Score = 259 (96.2 bits), Expect = 1.6e-21, P = 1.6e-21
 Identities = 47/79 (59%), Positives = 57/79 (72%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NAP  ++TLN IYQFI   FP+YR+   GW+NSIRHNLSLN+CF
Sbjct:    77 VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECF 136

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW +D
Sbjct:   137 VKVPRDDKKPGKGSYWTLD 155


>MGI|MGI:1347466 [details] [associations]
            symbol:Foxc1 "forkhead box C1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001501 "skeletal system
            development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
            [GO:0001541 "ovarian follicle development" evidence=IMP]
            [GO:0001568 "blood vessel development" evidence=IGI] [GO:0001570
            "vasculogenesis" evidence=IBA] [GO:0001654 "eye development"
            evidence=ISO;IMP] [GO:0001656 "metanephros development"
            evidence=IBA] [GO:0001657 "ureteric bud development" evidence=IMP]
            [GO:0001701 "in utero embryonic development" evidence=IMP]
            [GO:0001756 "somitogenesis" evidence=IGI] [GO:0001822 "kidney
            development" evidence=IMP] [GO:0001945 "lymph vessel development"
            evidence=IGI] [GO:0001946 "lymphangiogenesis" evidence=IBA]
            [GO:0001974 "blood vessel remodeling" evidence=IGI] [GO:0003007
            "heart morphogenesis" evidence=IGI] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO;IDA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0005720 "nuclear heterochromatin" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IGI]
            [GO:0007420 "brain development" evidence=IMP] [GO:0007507 "heart
            development" evidence=IGI;ISO;IMP] [GO:0008134 "transcription
            factor binding" evidence=ISO;IBA] [GO:0008301 "DNA binding,
            bending" evidence=ISO;IBA] [GO:0008354 "germ cell migration"
            evidence=IMP] [GO:0014032 "neural crest cell development"
            evidence=IGI] [GO:0014034 "neural crest cell fate commitment"
            evidence=IBA] [GO:0030199 "collagen fibril organization"
            evidence=IMP] [GO:0030203 "glycosaminoglycan metabolic process"
            evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IBA]
            [GO:0032808 "lacrimal gland development" evidence=IMP] [GO:0035050
            "embryonic heart tube development" evidence=IGI] [GO:0042475
            "odontogenesis of dentin-containing tooth" evidence=ISO;IBA]
            [GO:0043010 "camera-type eye development" evidence=IMP] [GO:0043066
            "negative regulation of apoptotic process" evidence=IGI]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISO]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IDA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045930 "negative regulation of
            mitotic cell cycle" evidence=ISO;IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO;IDA] [GO:0046620 "regulation of organ growth"
            evidence=IGI] [GO:0048010 "vascular endothelial growth factor
            receptor signaling pathway" evidence=IGI] [GO:0048341 "paraxial
            mesoderm formation" evidence=IGI] [GO:0048343 "paraxial mesodermal
            cell fate commitment" evidence=IBA] [GO:0048762 "mesenchymal cell
            differentiation" evidence=IMP] [GO:0048844 "artery morphogenesis"
            evidence=IMP] [GO:0050880 "regulation of blood vessel size"
            evidence=IGI] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IGI]
            [GO:0060038 "cardiac muscle cell proliferation" evidence=IGI]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1347466 GO:GO:0005737 GO:GO:0043066 GO:GO:0007420
            GO:GO:0043565 GO:GO:0001701 GO:GO:0005720 GO:GO:0030199
            GO:GO:0045944 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0008301
            GO:GO:0001756 GO:GO:0043010 GO:GO:0044212 GO:GO:0001501
            GO:GO:0001974 GO:GO:0003690 GO:GO:0001541 GO:GO:0001946
            GO:GO:0001570 GO:GO:0042475 GO:GO:0008134 GO:GO:0014032
            GO:GO:0050880 GO:GO:0001503 GO:GO:0048844 GO:GO:0031490
            GO:GO:0001656 GO:GO:0001657 GO:GO:0051090 GO:GO:0046620
            GO:GO:0048010 GO:GO:0045930 GO:GO:0060038 GO:GO:0055010
            GO:GO:0030203 eggNOG:COG5025 KO:K09396 GO:GO:0035050 GO:GO:0008354
            GeneTree:ENSGT00690000101636 GO:GO:0032808 CTD:2296
            HOVERGEN:HBG051640 OMA:QRIGLNN GO:GO:0014034 GO:GO:0048343
            EMBL:AF045017 EMBL:AJ223298 EMBL:AK144420 EMBL:BC052011 EMBL:X71939
            EMBL:L10406 IPI:IPI00122483 PIR:I49674 RefSeq:NP_032618.2
            UniGene:Mm.12949 ProteinModelPortal:Q61572 SMR:Q61572 IntAct:Q61572
            STRING:Q61572 PhosphoSite:Q61572 PRIDE:Q61572
            Ensembl:ENSMUST00000062292 GeneID:17300 KEGG:mmu:17300
            HOGENOM:HOG000007939 InParanoid:Q9QWR9 NextBio:291834 Bgee:Q61572
            CleanEx:MM_FOXC1 Genevestigator:Q61572
            GermOnline:ENSMUSG00000050295 Uniprot:Q61572
        Length = 553

 Score = 259 (96.2 bits), Expect = 1.6e-21, P = 1.6e-21
 Identities = 47/79 (59%), Positives = 57/79 (72%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NAP  ++TLN IYQFI   FP+YR+   GW+NSIRHNLSLN+CF
Sbjct:    77 VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECF 136

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW +D
Sbjct:   137 VKVPRDDKKPGKGSYWTLD 155


>UNIPROTKB|Q4H3J3 [details] [associations]
            symbol:Ci-FoxC "Transcription factor protein" species:7719
            "Ciona intestinalis" [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007219 "Notch signaling pathway" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009653
            "anatomical structure morphogenesis" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0031490 "chromatin DNA binding" evidence=IBA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0046620 "regulation of
            organ growth" evidence=IBA] [GO:0048010 "vascular endothelial
            growth factor receptor signaling pathway" evidence=IBA] [GO:0048513
            "organ development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0043565 GO:GO:0045944 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0009653 GO:GO:0007389 GO:GO:0031490 GO:GO:0051090
            GO:GO:0046620 GO:GO:0048010 GO:GO:0048513 eggNOG:COG5025 KO:K09396
            GO:GO:0009888 EMBL:AB210429 RefSeq:NP_001071708.1 UniGene:Cin.33243
            ProteinModelPortal:Q4H3J3 SMR:Q4H3J3 GeneID:778609 KEGG:cin:778609
            CTD:373528 HOGENOM:HOG000169861 InParanoid:Q4H3J3 Uniprot:Q4H3J3
        Length = 511

 Score = 257 (95.5 bits), Expect = 2.1e-21, P = 2.1e-21
 Identities = 50/106 (47%), Positives = 66/106 (62%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NAP  ++TLN IYQ+I   FP+YRE   GW+NSIRHNLSLN+CF
Sbjct:    98 VKPPYSYIALIAMAIQNAPDKKVTLNGIYQWIMERFPFYRENKQGWQNSIRHNLSLNECF 157

Query:    70 TKVARPKDDPGKGSYWAID---YNHTADDGPSKKKVKLPRVSPYSP 112
              K+ R    PGKGSYW +D   YN   +    +++ +  R     P
Sbjct:   158 VKIPRDDKKPGKGSYWTMDPDAYNMFENGSYLRRRKRFKRKQDGGP 203


>UNIPROTKB|E1BTF1 [details] [associations]
            symbol:FOXL1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00690000101636
            EMBL:AADN02064408 IPI:IPI00814490 Ensembl:ENSGALT00000039026
            Uniprot:E1BTF1
        Length = 278

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 47/96 (48%), Positives = 64/96 (66%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI  AP+ ++TL+ IYQFI   FP+Y +   GW+NSIRHNLSLN CF KV R
Sbjct:    44 SYIALIAMAIKEAPEQKVTLSGIYQFIMDRFPFYHDNKQGWQNSIRHNLSLNDCFVKVPR 103

Query:    75 PKDDPGKGSYWAIDYN--HTADDGPSKKKVKLPRVS 108
              K  PGKGSYW +D       ++G  +++ + P+ S
Sbjct:   104 EKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKAS 139


>UNIPROTKB|E1BVS9 [details] [associations]
            symbol:FOXJ1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0002508 "central tolerance induction"
            evidence=IEA] [GO:0002635 "negative regulation of germinal center
            formation" evidence=IEA] [GO:0002897 "positive regulation of
            central B cell tolerance induction" evidence=IEA] [GO:0002924
            "negative regulation of humoral immune response mediated by
            circulating immunoglobulin" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
            [GO:0007420 "brain development" evidence=IEA] [GO:0030036 "actin
            cytoskeleton organization" evidence=IEA] [GO:0032088 "negative
            regulation of NF-kappaB transcription factor activity"
            evidence=IEA] [GO:0032862 "activation of Rho GTPase activity"
            evidence=IEA] [GO:0033085 "negative regulation of T cell
            differentiation in thymus" evidence=IEA] [GO:0035089 "establishment
            of apical/basal cell polarity" evidence=IEA] [GO:0035502
            "metanephric part of ureteric bud development" evidence=IEA]
            [GO:0042130 "negative regulation of T cell proliferation"
            evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
            [GO:0045409 "negative regulation of interleukin-6 biosynthetic
            process" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0050869 "negative regulation of B cell activation"
            evidence=IEA] [GO:0050900 "leukocyte migration" evidence=IEA]
            [GO:0060972 "left/right pattern formation" evidence=IEA]
            [GO:0072016 "glomerular parietal epithelial cell development"
            evidence=IEA] [GO:1901248 "positive regulation of lung ciliated
            cell differentiation" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0042130 GO:GO:0030036 GO:GO:0050900 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0000122 GO:GO:0032088 GO:GO:0006959
            GO:GO:0033085 GO:GO:0032862 GO:GO:0030856 GO:GO:0002924 OMA:PVHIHPA
            GO:GO:0035089 GO:GO:0050869 GO:GO:0002635 GO:GO:0045409
            GO:GO:0002897 GeneTree:ENSGT00700000104094 EMBL:AADN02029953
            EMBL:AADN02029954 EMBL:AADN02029955 IPI:IPI00684173
            Ensembl:ENSGALT00000034839 Uniprot:E1BVS9
        Length = 439

 Score = 254 (94.5 bits), Expect = 2.5e-21, P = 2.5e-21
 Identities = 53/108 (49%), Positives = 74/108 (68%)

Query:     3 ITYKTG-NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             I YKT  ++K   SYA+LI +A+  + + ++TL+ IY++IT  F Y+R A+  W+NSIRH
Sbjct:   118 IDYKTNPHVKPPYSYATLICMAMEASKKTKITLSAIYKWITDNFCYFRHADPTWQNSIRH 177

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAID--YNHTADDGPSKKKVKLPRV 107
             NLSLNKCF KV R KD+PGKG +W ID  Y     +G  KK+ ++P V
Sbjct:   178 NLSLNKCFIKVPREKDEPGKGGFWKIDPQYADRLMNGAFKKR-RMPPV 224


>RGD|1589718 [details] [associations]
            symbol:Foxc1 "forkhead box C1" species:10116 "Rattus norvegicus"
            [GO:0001501 "skeletal system development" evidence=ISO] [GO:0001503
            "ossification" evidence=ISO] [GO:0001541 "ovarian follicle
            development" evidence=ISO] [GO:0001568 "blood vessel development"
            evidence=ISO] [GO:0001654 "eye development" evidence=ISO]
            [GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
            "in utero embryonic development" evidence=ISO] [GO:0001756
            "somitogenesis" evidence=ISO] [GO:0001822 "kidney development"
            evidence=ISO] [GO:0001945 "lymph vessel development" evidence=ISO]
            [GO:0001974 "blood vessel remodeling" evidence=ISO] [GO:0003007
            "heart morphogenesis" evidence=ISO] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005720 "nuclear heterochromatin" evidence=ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0007219 "Notch
            signaling pathway" evidence=ISO] [GO:0007420 "brain development"
            evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
            [GO:0008134 "transcription factor binding" evidence=ISO]
            [GO:0008301 "DNA binding, bending" evidence=ISO] [GO:0008354 "germ
            cell migration" evidence=ISO] [GO:0014032 "neural crest cell
            development" evidence=ISO] [GO:0030199 "collagen fibril
            organization" evidence=ISO] [GO:0030203 "glycosaminoglycan
            metabolic process" evidence=ISO] [GO:0032808 "lacrimal gland
            development" evidence=ISO] [GO:0035050 "embryonic heart tube
            development" evidence=ISO] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=ISO] [GO:0043010 "camera-type eye
            development" evidence=ISO] [GO:0043066 "negative regulation of
            apoptotic process" evidence=ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISO] [GO:0044212 "transcription regulatory region
            DNA binding" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045930 "negative
            regulation of mitotic cell cycle" evidence=ISO] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0046620 "regulation of organ growth"
            evidence=ISO] [GO:0048010 "vascular endothelial growth factor
            receptor signaling pathway" evidence=ISO] [GO:0048341 "paraxial
            mesoderm formation" evidence=ISO] [GO:0048762 "mesenchymal cell
            differentiation" evidence=ISO] [GO:0048844 "artery morphogenesis"
            evidence=ISO] [GO:0050880 "regulation of blood vessel size"
            evidence=ISO] [GO:0055010 "ventricular cardiac muscle tissue
            morphogenesis" evidence=ISO] [GO:0060038 "cardiac muscle cell
            proliferation" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
            REFSEQ:XM_002725235 Ncbi:XP_002725281
        Length = 788

 Score = 259 (96.2 bits), Expect = 3.5e-21, P = 3.5e-21
 Identities = 47/79 (59%), Positives = 57/79 (72%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI NAP  ++TLN IYQFI   FP+YR+   GW+NSIRHNLSLN+CF
Sbjct:   335 VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECF 394

Query:    70 TKVARPKDDPGKGSYWAID 88
              KV R    PGKGSYW +D
Sbjct:   395 VKVPRDDKKPGKGSYWTLD 413


>UNIPROTKB|Q7SAT6 [details] [associations]
            symbol:NCU06173 "Putative uncharacterized protein"
            species:367110 "Neurospora crassa OR74A" [GO:0000790 "nuclear
            chromatin" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000790 GO:GO:0003690 GO:GO:0008134 GO:GO:0051090
            eggNOG:COG5025 EMBL:AABX02000025 OrthoDB:EOG4XKZH6
            RefSeq:XP_962742.2 UniGene:Ncr.24238 ProteinModelPortal:Q7SAT6
            EnsemblFungi:EFNCRT00000006051 GeneID:3878890 KEGG:ncr:NCU06173
            OMA:NARISDS Uniprot:Q7SAT6
        Length = 806

 Score = 259 (96.2 bits), Expect = 3.6e-21, P = 3.6e-21
 Identities = 57/128 (44%), Positives = 78/128 (60%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA+LI +AI  +PQ R+TL++IY++I  TF +Y+ +++GW+NSIRHNLSLNK F K  R
Sbjct:   213 SYATLIGMAILRSPQRRLTLSQIYKWIAETFSFYQLSDSGWQNSIRHNLSLNKHFIKQER 272

Query:    75 PKDDPGKGSYWAIDYNHTADDGPSKKKVKLPRVSPYSPVECXXXXXXXDVHNSKPPTSIS 134
             PKDDPGKG+YWAI+          K   K P  +   PV          +  S+PP  + 
Sbjct:   273 PKDDPGKGNYWAIEPGAEQFFMKEKPSRKAPPSAENLPV------MSTRLEPSQPPLGVQ 326

Query:   135 -SVPNTVS 141
                PN+ S
Sbjct:   327 PQEPNSPS 334


>ZFIN|ZDB-GENE-110407-5 [details] [associations]
            symbol:foxf2a "forkhead box F2a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-110407-5 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 OMA:SPYIKQQ EMBL:CU856140
            IPI:IPI00611028 Ensembl:ENSDART00000028159 Bgee:F1QHL6
            Uniprot:F1QHL6
        Length = 383

 Score = 232 (86.7 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
 Identities = 41/74 (55%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P  R+TL+EIYQF+   FP++R +  GWKNS+RHNLSLN+CF K+ +
Sbjct:    62 SYIALIVMAIQSSPTKRLTLSEIYQFLQARFPFFRGSYQGWKNSVRHNLSLNECFIKLPK 121

Query:    75 PKDDPGKGSYWAID 88
                 PGKG YW ID
Sbjct:   122 GLGRPGKGHYWTID 135

 Score = 36 (17.7 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query:   107 VSPY---SPVECXXXXXXXDVHNSKPPTSI 133
             VSPY    P+          +H+S PP S+
Sbjct:   283 VSPYIKQQPLS-SSSPTSSGLHSSMPPYSL 311


>UNIPROTKB|F1PGV1 [details] [associations]
            symbol:FOXJ1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 CTD:2302
            KO:K09402 OMA:PVHIHPA GeneTree:ENSGT00700000104094
            EMBL:AAEX03006287 RefSeq:XP_533124.2 Ensembl:ENSCAFT00000008129
            GeneID:475917 KEGG:cfa:475917 Uniprot:F1PGV1
        Length = 422

 Score = 251 (93.4 bits), Expect = 4.5e-21, P = 4.5e-21
 Identities = 53/108 (49%), Positives = 71/108 (65%)

Query:     3 ITYKTG-NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             + Y T  N+K   SYA+LI +A+  +   ++TL+ IY++IT  F Y+R A+  W+NSIRH
Sbjct:   112 VDYATNPNVKPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQNSIRH 171

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAID--YNHTADDGPSKKKVKLPRV 107
             NLSLNKCF KV R KD+PGKG +W ID  Y      G  KK+ +LP V
Sbjct:   172 NLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKR-RLPPV 218


>ZFIN|ZDB-GENE-081022-71 [details] [associations]
            symbol:zgc:194189 "zgc:194189" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-081022-71 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 OrthoDB:EOG4MCX19 HOGENOM:HOG000218632
            HOVERGEN:HBG051651 EMBL:CT573456 EMBL:BC162838 IPI:IPI00502363
            RefSeq:NP_001122282.1 UniGene:Dr.148363 Ensembl:ENSDART00000020616
            GeneID:100004081 KEGG:dre:100004081 OMA:RRVKRPY NextBio:20786110
            Uniprot:B3DHP4
        Length = 260

 Score = 228 (85.3 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
 Identities = 42/100 (42%), Positives = 63/100 (63%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI  +   ++TLN+IY +I   FPYY +   GW+NSIRHNLSLN+CF K+ R
Sbjct:    39 SYVALIAMAIRESEDKKLTLNDIYSYIISKFPYYEKNKKGWQNSIRHNLSLNECFVKIPR 98

Query:    75 PKDDPGKGSYWAID--YNHTADDGPSKKKVKLPRVSPYSP 112
                   KG++W +D  +N   + G  +++ ++ R  PY P
Sbjct:    99 ESGGERKGNFWTLDPAFNDMFEKGNYRRRRRVKR--PYRP 136

 Score = 33 (16.7 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query:   125 HNSKPPTSISS 135
             H+S  PT ISS
Sbjct:   170 HHSGSPTHISS 180


>ZFIN|ZDB-GENE-070410-88 [details] [associations]
            symbol:zgc:162612 "zgc:162612" species:7955 "Danio
            rerio" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-070410-88 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 HOGENOM:HOG000231285 EMBL:FP016243
            EMBL:BC135031 IPI:IPI00846054 RefSeq:NP_001082957.1
            UniGene:Dr.87458 SMR:A4IGC7 Ensembl:ENSDART00000113780
            GeneID:100037333 KEGG:dre:100037333 OMA:SDMFENG NextBio:20788507
            Uniprot:A4IGC7
        Length = 308

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 45/85 (52%), Positives = 60/85 (70%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K+ ++K   SY +LI +AI  +P+ R+TL+EI  FI+H F YYRE    W+NSIRHNLSL
Sbjct:    59 KSSSVKPPYSYIALITMAILQSPKKRLTLSEICDFISHRFVYYREKFPAWQNSIRHNLSL 118

Query:    66 NKCFTKVARPKDDPGKGSYWAIDYN 90
             N CF K+ R   +PGKG+YW +D N
Sbjct:   119 NDCFVKMPREPGNPGKGNYWTLDPN 143


>UNIPROTKB|Q3Y598 [details] [associations]
            symbol:FOXA3 "Hepatocyte nuclear factor 3-gamma"
            species:9913 "Bos taurus" [GO:0070368 "positive regulation of
            hepatocyte differentiation" evidence=IBA] [GO:0060487 "lung
            epithelial cell differentiation" evidence=IRD] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IRD] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0048665
            "neuron fate specification" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0021999 "neural plate anterior/posterior
            regionalization" evidence=IBA] [GO:0019904 "protein domain specific
            binding" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0009267 "cellular response to starvation"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0007420 "brain development" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0001678
            "cellular glucose homeostasis" evidence=IBA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0019904 GO:GO:0008285 GO:GO:0007420
            GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0007283 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0044212 GO:GO:0003690 GO:GO:0009267
            GO:GO:0008134 GO:GO:0048665 GO:GO:0051090 GO:GO:0001678
            GO:GO:0021999 eggNOG:COG5025 GeneTree:ENSGT00700000104475
            InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
            HOVERGEN:HBG006621 EMBL:DQ157763 EMBL:BC116076 IPI:IPI00698928
            RefSeq:NP_001028291.1 UniGene:Bt.49749 ProteinModelPortal:Q3Y598
            SMR:Q3Y598 Ensembl:ENSBTAT00000016056 GeneID:503622 KEGG:bta:503622
            CTD:3171 InParanoid:Q3Y598 KO:K08038 OMA:VYYQGVY OrthoDB:EOG43R3NB
            NextBio:20866246 GO:GO:0070368 Uniprot:Q3Y598
        Length = 351

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 46/73 (63%), Positives = 53/73 (72%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYRE    W+NSIRH+LS N CF KVAR
Sbjct:   122 SYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVAR 181

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYWA+
Sbjct:   182 SPDKPGKGSYWAL 194


>UNIPROTKB|E2RNB4 [details] [associations]
            symbol:FOXA3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0009267 "cellular response to starvation" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001678 "cellular
            glucose homeostasis" evidence=IEA] [GO:0019904 "protein domain
            specific binding" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=IEA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007283 GO:GO:0044212
            GO:GO:0009267 GO:GO:0001678 GeneTree:ENSGT00700000104475
            InterPro:IPR018533 Pfam:PF09354 CTD:3171 KO:K08038 OMA:VYYQGVY
            EMBL:AAEX03000870 RefSeq:XP_541549.3 ProteinModelPortal:E2RNB4
            Ensembl:ENSCAFT00000007001 GeneID:484434 KEGG:cfa:484434
            NextBio:20858576 Uniprot:E2RNB4
        Length = 350

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 46/73 (63%), Positives = 53/73 (72%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYRE    W+NSIRH+LS N CF KVAR
Sbjct:   122 SYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVAR 181

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYWA+
Sbjct:   182 SPDKPGKGSYWAL 194


>UNIPROTKB|P55318 [details] [associations]
            symbol:FOXA3 "Hepatocyte nuclear factor 3-gamma"
            species:9606 "Homo sapiens" [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0001678 "cellular glucose homeostasis" evidence=IBA;TAS]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007420 "brain
            development" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009267 "cellular response to starvation"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0019904 "protein domain specific binding" evidence=IBA]
            [GO:0021999 "neural plate anterior/posterior regionalization"
            evidence=IBA] [GO:0048665 "neuron fate specification" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IRD] [GO:0060487 "lung epithelial cell differentiation"
            evidence=IRD] [GO:0070368 "positive regulation of hepatocyte
            differentiation" evidence=IBA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IMP] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA;TAS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0005634
            "nucleus" evidence=TAS] [GO:0031018 "endocrine pancreas
            development" evidence=TAS] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0019904 Reactome:REACT_111045 GO:GO:0008285 GO:GO:0007420
            GO:GO:0043565 Pathway_Interaction_DB:hnf3apathway GO:GO:0045944
            EMBL:CH471126 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007283
            GO:GO:0016568 Pathway_Interaction_DB:hnf3bpathway GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0044212
            GO:GO:0003690 GO:GO:0009267 GO:GO:0008134 GO:GO:0031018
            GO:GO:0048665 GO:GO:0051090 GO:GO:0001678 GO:GO:0021999
            eggNOG:COG5025 InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
            HOVERGEN:HBG006621 Pathway_Interaction_DB:hnf3pathway CTD:3171
            KO:K08038 OMA:VYYQGVY OrthoDB:EOG43R3NB GO:GO:0070368 EMBL:L12141
            EMBL:AF176114 EMBL:AF176113 EMBL:BT006720 EMBL:AK223473
            EMBL:EU275778 EMBL:BC016024 IPI:IPI00024388 PIR:C48924
            RefSeq:NP_004488.2 UniGene:Hs.36137 PDB:1VTN PDBsum:1VTN
            ProteinModelPortal:P55318 SMR:P55318 IntAct:P55318 STRING:P55318
            PhosphoSite:P55318 DMDM:8247938 PaxDb:P55318 PRIDE:P55318
            DNASU:3171 Ensembl:ENST00000302177 GeneID:3171 KEGG:hsa:3171
            UCSC:uc002pdr.3 GeneCards:GC19P046368 HGNC:HGNC:5023 HPA:CAB015154
            MIM:602295 neXtProt:NX_P55318 PharmGKB:PA201092 InParanoid:P55318
            PhylomeDB:P55318 GenomeRNAi:3171 NextBio:12574 Bgee:P55318
            CleanEx:HS_FOXA3 Genevestigator:P55318 GermOnline:ENSG00000170608
            Uniprot:P55318
        Length = 350

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 46/73 (63%), Positives = 53/73 (72%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYRE    W+NSIRH+LS N CF KVAR
Sbjct:   121 SYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVAR 180

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYWA+
Sbjct:   181 SPDKPGKGSYWAL 193


>UNIPROTKB|F1RM41 [details] [associations]
            symbol:FOXA3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009267 "cellular
            response to starvation" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001678 "cellular glucose homeostasis"
            evidence=IEA] [GO:0019904 "protein domain specific binding"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007283 GO:GO:0044212
            GO:GO:0009267 GO:GO:0001678 GeneTree:ENSGT00700000104475
            InterPro:IPR018533 Pfam:PF09354 KO:K08038 OMA:VYYQGVY EMBL:FP102597
            RefSeq:XP_003127277.1 UniGene:Ssc.18674 Ensembl:ENSSSCT00000003431
            GeneID:100512416 KEGG:ssc:100512416 Uniprot:F1RM41
        Length = 350

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 46/73 (63%), Positives = 53/73 (72%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYRE    W+NSIRH+LS N CF KVAR
Sbjct:   122 SYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVAR 181

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYWA+
Sbjct:   182 SPDKPGKGSYWAL 194


>MGI|MGI:1347477 [details] [associations]
            symbol:Foxa3 "forkhead box A3" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001678 "cellular glucose
            homeostasis" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISO;IMP] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007420 "brain
            development" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=ISO;IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009267 "cellular response to starvation"
            evidence=IMP] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0019904
            "protein domain specific binding" evidence=IBA] [GO:0021999 "neural
            plate anterior/posterior regionalization" evidence=IBA] [GO:0030154
            "cell differentiation" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IDA] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=ISO] [GO:0044428 "nuclear part"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO;IGI] [GO:0048665
            "neuron fate specification" evidence=IBA] [GO:0051090 "regulation
            of sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0070368 "positive regulation of hepatocyte
            differentiation" evidence=ISO;IBA] Reactome:REACT_13641
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1347477
            GO:GO:0005829 GO:GO:0019904 GO:GO:0008285 GO:GO:0007420
            GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0007283 GO:GO:0016568 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0009790 GO:GO:0044212
            Reactome:REACT_127416 GO:GO:0003690 GO:GO:0009267 GO:GO:0008134
            GO:GO:0031018 GO:GO:0048665 GO:GO:0051090 GO:GO:0001678
            GO:GO:0021999 eggNOG:COG5025 GeneTree:ENSGT00700000104475
            InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
            HOVERGEN:HBG006621 CTD:3171 KO:K08038 OMA:VYYQGVY OrthoDB:EOG43R3NB
            GO:GO:0070368 EMBL:X74938 IPI:IPI00119677 PIR:C54258
            RefSeq:NP_032286.1 UniGene:Mm.42260 ProteinModelPortal:P35584
            SMR:P35584 STRING:P35584 PhosphoSite:P35584 PRIDE:P35584
            Ensembl:ENSMUST00000036018 GeneID:15377 KEGG:mmu:15377
            UCSC:uc009fkd.1 InParanoid:P35584 NextBio:288034 Bgee:P35584
            CleanEx:MM_FOXA3 Genevestigator:P35584
            GermOnline:ENSMUSG00000040891 Uniprot:P35584
        Length = 353

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 46/73 (63%), Positives = 53/73 (72%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYRE    W+NSIRH+LS N CF KVAR
Sbjct:   123 SYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVAR 182

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYWA+
Sbjct:   183 SPDKPGKGSYWAL 195


>RGD|2809 [details] [associations]
            symbol:Foxa3 "forkhead box A3" species:10116 "Rattus norvegicus"
          [GO:0001678 "cellular glucose homeostasis" evidence=ISO;IBA;TAS]
          [GO:0003677 "DNA binding" evidence=ISO;IDA;TAS] [GO:0003690
          "double-stranded DNA binding" evidence=IBA] [GO:0003700
          "sequence-specific DNA binding transcription factor activity"
          evidence=ISO;IDA;TAS] [GO:0003705 "RNA polymerase II distal enhancer
          sequence-specific DNA binding transcription factor activity"
          evidence=IBA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
          "transcription factor complex" evidence=IBA] [GO:0006355 "regulation
          of transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
          "regulation of transcription from RNA polymerase II promoter"
          evidence=ISO] [GO:0007283 "spermatogenesis" evidence=ISO] [GO:0007420
          "brain development" evidence=IBA] [GO:0008134 "transcription factor
          binding" evidence=IBA] [GO:0008285 "negative regulation of cell
          proliferation" evidence=IMP] [GO:0008301 "DNA binding, bending"
          evidence=IBA] [GO:0009267 "cellular response to starvation"
          evidence=ISO;IBA] [GO:0009790 "embryo development" evidence=IBA]
          [GO:0016568 "chromatin modification" evidence=IEA] [GO:0019904
          "protein domain specific binding" evidence=IBA] [GO:0021999 "neural
          plate anterior/posterior regionalization" evidence=IBA] [GO:0031667
          "response to nutrient levels" evidence=IEP] [GO:0043565
          "sequence-specific DNA binding" evidence=IEA;ISO] [GO:0044212
          "transcription regulatory region DNA binding" evidence=ISO]
          [GO:0044428 "nuclear part" evidence=IDA] [GO:0045944 "positive
          regulation of transcription from RNA polymerase II promoter"
          evidence=ISO;IDA] [GO:0048665 "neuron fate specification"
          evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
          binding transcription factor activity" evidence=IBA] [GO:0060441
          "epithelial tube branching involved in lung morphogenesis"
          evidence=IRD] [GO:0060487 "lung epithelial cell differentiation"
          evidence=IRD] [GO:0070368 "positive regulation of hepatocyte
          differentiation" evidence=IMP] InterPro:IPR001766 InterPro:IPR013638
          InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
          PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
          RGD:2809 GO:GO:0019904 GO:GO:0008285 GO:GO:0007420 GO:GO:0043565
          GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007283
          GO:GO:0016568 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
          GO:GO:0044212 GO:GO:0003690 GO:GO:0009267 GO:GO:0008134 GO:GO:0048665
          GO:GO:0051090 GO:GO:0001678 GO:GO:0021999 eggNOG:COG5025
          InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
          HOVERGEN:HBG006621 CTD:3171 KO:K08038 OrthoDB:EOG43R3NB GO:GO:0070368
          EMBL:L09648 IPI:IPI00213519 PIR:S35090 RefSeq:NP_058773.1
          UniGene:Rn.10949 ProteinModelPortal:P32183 SMR:P32183 STRING:P32183
          PRIDE:P32183 GeneID:25100 KEGG:rno:25100 InParanoid:P32183
          NextBio:605413 Genevestigator:P32183 GermOnline:ENSRNOG00000014256
          Uniprot:P32183
        Length = 354

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 46/73 (63%), Positives = 53/73 (72%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYRE    W+NSIRH+LS N CF KVAR
Sbjct:   123 SYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVAR 182

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYWA+
Sbjct:   183 SPDKPGKGSYWAL 195


>UNIPROTKB|G3V7T9 [details] [associations]
            symbol:Foxa3 "Forkhead box A3, isoform CRA_b" species:10116
            "Rattus norvegicus" [GO:0001678 "cellular glucose homeostasis"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            [GO:0009267 "cellular response to starvation" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 RGD:2809 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:CH473979
            GeneTree:ENSGT00700000104475 InterPro:IPR018533 Pfam:PF09354
            OMA:VYYQGVY UniGene:Rn.10949 Ensembl:ENSRNOT00000019219
            Uniprot:G3V7T9
        Length = 354

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 46/73 (63%), Positives = 53/73 (72%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYRE    W+NSIRH+LS N CF KVAR
Sbjct:   123 SYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVAR 182

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYWA+
Sbjct:   183 SPDKPGKGSYWAL 195


>WB|WBGene00006853 [details] [associations]
            symbol:unc-130 species:6239 "Caenorhabditis elegans"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA;ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0009790 "embryo development" evidence=IMP] [GO:0007399 "nervous
            system development" evidence=IMP] [GO:0045138 "tail tip
            morphogenesis" evidence=IMP] [GO:0048846 "axon extension involved
            in axon guidance" evidence=IMP] [GO:0045185 "maintenance of protein
            location" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0001106 "RNA polymerase
            II transcription corepressor activity" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0009792
            GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0045138
            GO:GO:0001106 GO:GO:0048485 GO:GO:0048484 GO:GO:0051090
            GO:GO:0048846 GO:GO:0045185 eggNOG:COG5025 GO:GO:0009888
            EMBL:Z49125 GeneTree:ENSGT00700000104135 GO:GO:0048937 HSSP:Q63245
            PIR:T20033 RefSeq:NP_496411.1 ProteinModelPortal:Q18694 SMR:Q18694
            IntAct:Q18694 STRING:Q18694 PaxDb:Q18694 EnsemblMetazoa:C47G2.2
            GeneID:174721 KEGG:cel:CELE_C47G2.2 UCSC:C47G2.2 CTD:174721
            WormBase:C47G2.2 HOGENOM:HOG000016824 InParanoid:Q18694 OMA:MLFSMES
            NextBio:885208 Uniprot:Q18694
        Length = 333

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 45/85 (52%), Positives = 62/85 (72%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K+ + K   SY +LI ++I N+P+ ++TL+EI +FI + F YY+E    W+NSIRHNLSL
Sbjct:   122 KSSHAKPPYSYIALIAMSILNSPEKKLTLSEICEFIINKFEYYKEKFPAWQNSIRHNLSL 181

Query:    66 NKCFTKVARPKDDPGKGSYWAIDYN 90
             N CF KVAR   +PGKG+YWA+D N
Sbjct:   182 NDCFVKVARGPGNPGKGNYWALDPN 206


>UNIPROTKB|Q18694 [details] [associations]
            symbol:unc-130 "Protein UNC-130" species:6239
            "Caenorhabditis elegans" [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IBA] [GO:0048484 "enteric nervous system
            development" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0007422 "peripheral nervous system
            development" evidence=IBA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0009792 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0045138 GO:GO:0001106 GO:GO:0048485 GO:GO:0048484
            GO:GO:0051090 GO:GO:0048846 GO:GO:0045185 eggNOG:COG5025
            GO:GO:0009888 EMBL:Z49125 GeneTree:ENSGT00700000104135
            GO:GO:0048937 HSSP:Q63245 PIR:T20033 RefSeq:NP_496411.1
            ProteinModelPortal:Q18694 SMR:Q18694 IntAct:Q18694 STRING:Q18694
            PaxDb:Q18694 EnsemblMetazoa:C47G2.2 GeneID:174721
            KEGG:cel:CELE_C47G2.2 UCSC:C47G2.2 CTD:174721 WormBase:C47G2.2
            HOGENOM:HOG000016824 InParanoid:Q18694 OMA:MLFSMES NextBio:885208
            Uniprot:Q18694
        Length = 333

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 45/85 (52%), Positives = 62/85 (72%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K+ + K   SY +LI ++I N+P+ ++TL+EI +FI + F YY+E    W+NSIRHNLSL
Sbjct:   122 KSSHAKPPYSYIALIAMSILNSPEKKLTLSEICEFIINKFEYYKEKFPAWQNSIRHNLSL 181

Query:    66 NKCFTKVARPKDDPGKGSYWAIDYN 90
             N CF KVAR   +PGKG+YWA+D N
Sbjct:   182 NDCFVKVARGPGNPGKGNYWALDPN 206


>UNIPROTKB|Q4H3I6 [details] [associations]
            symbol:Ci-FoxI-a "Transcription factor protein"
            species:7719 "Ciona intestinalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009653 "anatomical structure morphogenesis" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0009653 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 eggNOG:COG5025 GO:GO:0009888
            GeneTree:ENSGT00690000101636 EMBL:EAAA01002694 EMBL:AB210436
            RefSeq:NP_001071711.1 UniGene:Cin.32849 SMR:Q4H3I6
            Ensembl:ENSCINT00000014814 GeneID:778614 KEGG:cin:778614 CTD:778614
            HOGENOM:HOG000134552 InParanoid:Q4H3I6 OMA:PLMECIA Uniprot:Q4H3I6
        Length = 732

 Score = 255 (94.8 bits), Expect = 8.1e-21, P = 8.1e-21
 Identities = 43/74 (58%), Positives = 58/74 (78%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY++LI LAI ++P  RMTL +IYQ++   FP+Y+ +  GW+NSIRHNLSLN CF KV R
Sbjct:   507 SYSALIALAIQSSPGKRMTLRQIYQYVVTYFPFYKNSKTGWRNSIRHNLSLNDCFKKVPR 566

Query:    75 PKDDPGKGSYWAID 88
              ++DPGKG+YW +D
Sbjct:   567 NENDPGKGNYWTLD 580


>ZFIN|ZDB-GENE-041212-76 [details] [associations]
            symbol:foxj1b "forkhead box J1b" species:7955 "Danio
            rerio" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0033085 "negative regulation of T cell
            differentiation in thymus" evidence=IBA] [GO:0005667 "transcription
            factor complex" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0060972 "left/right pattern formation"
            evidence=IBA] [GO:0002897 "positive regulation of central B cell
            tolerance induction" evidence=IBA] [GO:0050869 "negative regulation
            of B cell activation" evidence=IBA] [GO:0030855 "epithelial cell
            differentiation" evidence=IBA] [GO:0032862 "activation of Rho
            GTPase activity" evidence=IBA] [GO:0002635 "negative regulation of
            germinal center formation" evidence=IBA] [GO:0042130 "negative
            regulation of T cell proliferation" evidence=IBA] [GO:0002924
            "negative regulation of humoral immune response mediated by
            circulating immunoglobulin" evidence=IBA] [GO:0030036 "actin
            cytoskeleton organization" evidence=IBA] [GO:0032088 "negative
            regulation of NF-kappaB transcription factor activity"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0019904 "protein domain specific binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0050900 "leukocyte migration" evidence=IBA] [GO:0030324 "lung
            development" evidence=IBA] [GO:0045409 "negative regulation of
            interleukin-6 biosynthetic process" evidence=IBA] [GO:0035089
            "establishment of apical/basal cell polarity" evidence=IBA]
            [GO:0060088 "auditory receptor cell stereocilium organization"
            evidence=IMP] [GO:0042384 "cilium assembly" evidence=IMP]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0001947 "heart looping" evidence=IMP] [GO:0007368
            "determination of left/right symmetry" evidence=IMP] [GO:0003146
            "heart jogging" evidence=IMP] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 ZFIN:ZDB-GENE-041212-76 GO:GO:0019904
            GO:GO:0042130 GO:GO:0030036 GO:GO:0030324 GO:GO:0050900
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0003690 GO:GO:0042384
            GO:GO:0001947 GO:GO:0032088 GO:GO:0008134 GO:GO:0060088
            GO:GO:0030855 GO:GO:0033085 GO:GO:0003146 GO:GO:0032862
            GO:GO:0060972 GO:GO:0002924 HOGENOM:HOG000112631 HOVERGEN:HBG056832
            GO:GO:0035089 GO:GO:0050869 GO:GO:0002635 GO:GO:0045409
            GO:GO:0002897 EMBL:BC086726 IPI:IPI00482622 RefSeq:NP_001008648.1
            UniGene:Dr.37893 ProteinModelPortal:Q5PRB5 SMR:Q5PRB5 GeneID:494105
            KEGG:dre:494105 CTD:494105 InParanoid:Q5PRB5 NextBio:20865613
            Uniprot:Q5PRB5
        Length = 442

 Score = 249 (92.7 bits), Expect = 9.5e-21, P = 9.5e-21
 Identities = 53/107 (49%), Positives = 73/107 (68%)

Query:     3 ITYKTG-NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             I YKT  ++K   SYA+LI +A+  + + ++TL+ IY +IT  F YYR A   W+NSIRH
Sbjct:   130 IDYKTNRHVKPPYSYATLICMAMQASNKTKITLSAIYSWITENFCYYRYAEPSWQNSIRH 189

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAIDYNHTAD---DGPSKKKVKLP 105
             NLSLNKCF KV R KD+PGKG +W ID  + AD   +G  K++ ++P
Sbjct:   190 NLSLNKCFMKVPRQKDEPGKGGFWQIDPQY-ADMFVNGVFKRR-RMP 234


>ZFIN|ZDB-GENE-061116-1 [details] [associations]
            symbol:foxe1 "forkhead box E1 (thyroid transcription
            factor 2)" species:7955 "Danio rerio" [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0048703 "embryonic
            viscerocranium morphogenesis" evidence=IMP] [GO:0003419 "growth
            plate cartilage chondrocyte proliferation" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-061116-1 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0003419
            GO:GO:0048703 GeneTree:ENSGT00700000104135 CTD:2304 KO:K09398
            EMBL:BX005000 IPI:IPI00902176 RefSeq:XP_696065.1 UniGene:Dr.101314
            Ensembl:ENSDART00000109297 GeneID:567676 KEGG:dre:567676
            OMA:QLPSAYY NextBio:20888793 Uniprot:E7EZ33
        Length = 354

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 44/81 (54%), Positives = 60/81 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI+N+P  ++TL  IY+FIT  FP+YR+ +  W+NSIRHNL+LN CF K+ R
Sbjct:    44 SYIALISMAIANSPDRKLTLGGIYKFITERFPFYRDNSKKWQNSIRHNLTLNDCFIKIPR 103

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
                 PGKG+YWA+D N  A+D
Sbjct:   104 EPGRPGKGNYWALDPN--AED 122


>UNIPROTKB|Q6Q2B1 [details] [associations]
            symbol:foxk1 "Forkhead box protein K1 isoform alpha"
            species:31033 "Takifugu rubripes" [GO:0000287 "magnesium ion
            binding" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339 GO:GO:0000287
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0009888 HSSP:Q01167
            HOGENOM:HOG000072588 EMBL:AY566278 UniGene:Tru.2000
            ProteinModelPortal:Q6Q2B1 InParanoid:Q6Q2B1 Uniprot:Q6Q2B1
        Length = 558

 Score = 250 (93.1 bits), Expect = 1.6e-20, P = 1.6e-20
 Identities = 56/140 (40%), Positives = 80/140 (57%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AIS+AP  ++TL+ IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KVAR
Sbjct:   291 SYAQLIVQAISSAPDKQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFLKVAR 350

Query:    75 PKDDPGKGSYWAIDY---NHTADDGPSKKKVKLPRV--SPYSPVECXXXXXXXDVHNS-- 127
              +D+PGKGS+W +D    +   +    K++ +      +P+ P+           H    
Sbjct:   351 SQDEPGKGSFWRLDSASESKLVEQAFRKRRQRGVACFRTPFGPLS-SRSAPASPTHQGLL 409

Query:   128 KPPTSISSVPNTVSFFSDPL 147
              PP+S    P ++S    P+
Sbjct:   410 SPPSSGLQTPESLSREGSPI 429


>RGD|621723 [details] [associations]
            symbol:Foxe1 "forkhead box E1 (thyroid transcription factor 2)"
            species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0000981 "sequence-specific DNA binding RNA polymerase II
            transcription factor activity" evidence=IDA] [GO:0002089 "lens
            morphogenesis in camera-type eye" evidence=IBA] [GO:0003677 "DNA
            binding" evidence=ISO;IDA] [GO:0003690 "double-stranded DNA
            binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO;TAS] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0006590 "thyroid hormone
            generation" evidence=ISO;IBA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0007422 "peripheral nervous system
            development" evidence=IRD] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0016477 "cell migration" evidence=ISO;IBA]
            [GO:0030878 "thyroid gland development" evidence=ISO;IBA]
            [GO:0031069 "hair follicle morphogenesis" evidence=ISO;IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0048484 "enteric
            nervous system development" evidence=IRD] [GO:0048485 "sympathetic
            nervous system development" evidence=IRD] [GO:0048538 "thymus
            development" evidence=IEA;ISO] [GO:0048562 "embryonic organ
            morphogenesis" evidence=ISO;IBA] [GO:0048846 "axon extension
            involved in axon guidance" evidence=IRD] [GO:0048937 "lateral line
            nerve glial cell development" evidence=IRD] [GO:0051090 "regulation
            of sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0060022 "hard palate development"
            evidence=ISO;IBA] [GO:0060023 "soft palate development"
            evidence=ISO;IBA] [GO:0060465 "pharynx development"
            evidence=IEA;ISO] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:621723 GO:GO:0016477
            GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0008301
            GO:GO:0003690 GO:GO:0048538 GO:GO:0008134 EMBL:CH473962
            GO:GO:0007389 GO:GO:0060465 GO:GO:0051090 GO:GO:0031069
            GO:GO:0006590 GO:GO:0002089 GO:GO:0060023 eggNOG:COG5025
            GO:GO:0060022 GO:GO:0030878 GeneTree:ENSGT00700000104135
            HSSP:Q63245 CTD:2304 HOGENOM:HOG000231286 HOVERGEN:HBG051642
            KO:K09398 OMA:TGYQPAG GO:GO:0048562 EMBL:Y11321 IPI:IPI00195679
            RefSeq:NP_620264.1 UniGene:Rn.26546 SMR:O08771 STRING:O08771
            Ensembl:ENSRNOT00000012637 GeneID:192274 KEGG:rno:192274
            UCSC:RGD:621723 InParanoid:O08771 NextBio:622984
            Genevestigator:O08771 Uniprot:O08771
        Length = 370

 Score = 243 (90.6 bits), Expect = 1.6e-20, P = 1.6e-20
 Identities = 45/81 (55%), Positives = 60/81 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI++AP+ R+TL  IY+FIT  FP+YR+    W+NSIRHNL+LN CF K+ R
Sbjct:    58 SYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPR 117

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
                 PGKG+YWA+D N  A+D
Sbjct:   118 EAGRPGKGNYWALDPN--AED 136


>MGI|MGI:1353500 [details] [associations]
            symbol:Foxe1 "forkhead box E1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IBA] [GO:0000981
            "sequence-specific DNA binding RNA polymerase II transcription
            factor activity" evidence=ISO] [GO:0002089 "lens morphogenesis in
            camera-type eye" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003690 "double-stranded DNA binding"
            evidence=ISO;IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0006590 "thyroid hormone
            generation" evidence=IMP] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0016477 "cell migration" evidence=IMP] [GO:0030878 "thyroid
            gland development" evidence=ISO;IMP] [GO:0031069 "hair follicle
            morphogenesis" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0060022
            "hard palate development" evidence=ISO;IBA] [GO:0060023 "soft
            palate development" evidence=ISO;IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1353500
            GO:GO:0016477 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
            GO:GO:0008301 GO:GO:0003690 GO:GO:0048538 GO:GO:0008134
            GO:GO:0007389 GO:GO:0060465 GO:GO:0051090 GO:GO:0031069
            GO:GO:0006590 GO:GO:0002089 GO:GO:0060023 eggNOG:COG5025
            GO:GO:0060022 GO:GO:0030878 GeneTree:ENSGT00700000104135 CTD:2304
            HOGENOM:HOG000231286 HOVERGEN:HBG051642 KO:K09398 OMA:TGYQPAG
            GO:GO:0048562 EMBL:AJ457047 EMBL:AL806523 IPI:IPI00153583
            RefSeq:NP_899121.1 UniGene:Mm.354634 ProteinModelPortal:Q8R2I0
            SMR:Q8R2I0 STRING:Q8R2I0 PhosphoSite:Q8R2I0 PRIDE:Q8R2I0
            DNASU:110805 Ensembl:ENSMUST00000095097 GeneID:110805
            KEGG:mmu:110805 UCSC:uc008sto.1 InParanoid:A2AM00 NextBio:364693
            Bgee:Q8R2I0 CleanEx:MM_FOXE1 Genevestigator:Q8R2I0 Uniprot:Q8R2I0
        Length = 371

 Score = 243 (90.6 bits), Expect = 1.6e-20, P = 1.6e-20
 Identities = 45/81 (55%), Positives = 60/81 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI++AP+ R+TL  IY+FIT  FP+YR+    W+NSIRHNL+LN CF K+ R
Sbjct:    59 SYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPR 118

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
                 PGKG+YWA+D N  A+D
Sbjct:   119 EAGRPGKGNYWALDPN--AED 137


>UNIPROTKB|E1BNF3 [details] [associations]
            symbol:FOXJ1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:1901248 "positive regulation of lung ciliated cell
            differentiation" evidence=IEA] [GO:0072016 "glomerular parietal
            epithelial cell development" evidence=IEA] [GO:0060972 "left/right
            pattern formation" evidence=IEA] [GO:0050900 "leukocyte migration"
            evidence=IEA] [GO:0050869 "negative regulation of B cell
            activation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045409 "negative regulation of interleukin-6 biosynthetic
            process" evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
            [GO:0042130 "negative regulation of T cell proliferation"
            evidence=IEA] [GO:0035502 "metanephric part of ureteric bud
            development" evidence=IEA] [GO:0035089 "establishment of
            apical/basal cell polarity" evidence=IEA] [GO:0033085 "negative
            regulation of T cell differentiation in thymus" evidence=IEA]
            [GO:0032862 "activation of Rho GTPase activity" evidence=IEA]
            [GO:0032088 "negative regulation of NF-kappaB transcription factor
            activity" evidence=IEA] [GO:0030036 "actin cytoskeleton
            organization" evidence=IEA] [GO:0007420 "brain development"
            evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0002924 "negative
            regulation of humoral immune response mediated by circulating
            immunoglobulin" evidence=IEA] [GO:0002897 "positive regulation of
            central B cell tolerance induction" evidence=IEA] [GO:0002635
            "negative regulation of germinal center formation" evidence=IEA]
            [GO:0002508 "central tolerance induction" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0042130 GO:GO:0030036
            GO:GO:0050900 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0000122
            GO:GO:0042384 GO:GO:0032088 GO:GO:0006959 GO:GO:0033085
            GO:GO:0032862 GO:GO:0060972 GO:GO:0030856 GO:GO:0002924 CTD:2302
            KO:K09402 OMA:PVHIHPA GO:GO:0002508 GO:GO:0035089 GO:GO:0050869
            GO:GO:0002635 GO:GO:0045409 GO:GO:0002897
            GeneTree:ENSGT00700000104094 EMBL:DAAA02049505 IPI:IPI00705820
            RefSeq:NP_001179005.1 UniGene:Bt.88381 Ensembl:ENSBTAT00000010408
            GeneID:505891 KEGG:bta:505891 NextBio:20867364 Uniprot:E1BNF3
        Length = 421

 Score = 246 (91.7 bits), Expect = 1.6e-20, P = 1.6e-20
 Identities = 52/108 (48%), Positives = 71/108 (65%)

Query:     3 ITYKTG-NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             + Y T  ++K   SYA+LI +A+  +   ++TL+ IY++IT  F Y+R A+  W+NSIRH
Sbjct:   112 VDYATNPHVKPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQNSIRH 171

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAID--YNHTADDGPSKKKVKLPRV 107
             NLSLNKCF KV R KD+PGKG +W ID  Y      G  KK+ +LP V
Sbjct:   172 NLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKR-RLPPV 218


>UNIPROTKB|Q92949 [details] [associations]
            symbol:FOXJ1 "Forkhead box protein J1" species:9606 "Homo
            sapiens" [GO:0001947 "heart looping" evidence=IBA] [GO:0002635
            "negative regulation of germinal center formation"
            evidence=ISS;IBA] [GO:0002897 "positive regulation of central B
            cell tolerance induction" evidence=ISS;IBA] [GO:0002924 "negative
            regulation of humoral immune response mediated by circulating
            immunoglobulin" evidence=ISS;IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0019904 "protein domain specific binding" evidence=IBA]
            [GO:0030036 "actin cytoskeleton organization" evidence=ISS;IBA]
            [GO:0030324 "lung development" evidence=IBA] [GO:0030855
            "epithelial cell differentiation" evidence=IBA] [GO:0032088
            "negative regulation of NF-kappaB transcription factor activity"
            evidence=ISS;IBA] [GO:0032862 "activation of Rho GTPase activity"
            evidence=ISS;IBA] [GO:0033085 "negative regulation of T cell
            differentiation in thymus" evidence=ISS;IBA] [GO:0035089
            "establishment of apical/basal cell polarity" evidence=ISS;IBA]
            [GO:0042130 "negative regulation of T cell proliferation"
            evidence=IBA] [GO:0042384 "cilium assembly" evidence=ISS;IBA]
            [GO:0045409 "negative regulation of interleukin-6 biosynthetic
            process" evidence=ISS;IBA] [GO:0050869 "negative regulation of B
            cell activation" evidence=ISS;IBA] [GO:0050900 "leukocyte
            migration" evidence=ISS;IBA] [GO:0060972 "left/right pattern
            formation" evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=NAS] [GO:0003677 "DNA
            binding" evidence=NAS] [GO:0007283 "spermatogenesis" evidence=NAS]
            [GO:0007389 "pattern specification process" evidence=ISS]
            [GO:0002508 "central tolerance induction" evidence=ISS] [GO:0006959
            "humoral immune response" evidence=ISS] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0007420
            "brain development" evidence=ISS;NAS] [GO:0060429 "epithelium
            development" evidence=ISS] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IDA] [GO:1901248
            "positive regulation of lung ciliated cell differentiation"
            evidence=IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0060428 "lung
            epithelium development" evidence=IEP;NAS] [GO:0072016 "glomerular
            parietal epithelial cell development" evidence=IEP] [GO:0035502
            "metanephric part of ureteric bud development" evidence=IEP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0019904 GO:GO:0007420 GO:GO:0042130 GO:GO:0030036
            GO:GO:0050900 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0007283 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
            GO:GO:0008301 GO:GO:0003690 GO:GO:0042384 GO:GO:0001947
            GO:GO:0032088 GO:GO:0008134 GO:GO:0006959 GO:GO:0000976
            GO:GO:0033085 GO:GO:0035502 GO:GO:0032862 eggNOG:COG5025
            GO:GO:0060972 GO:GO:0060428 GO:GO:0002924 EMBL:U69537 EMBL:X99349
            EMBL:X99350 EMBL:X99351 EMBL:AJ272064 EMBL:BC046460 IPI:IPI00024319
            RefSeq:NP_001445.2 UniGene:Hs.651204 ProteinModelPortal:Q92949
            SMR:Q92949 IntAct:Q92949 STRING:Q92949 DMDM:12644465 PRIDE:Q92949
            Ensembl:ENST00000322957 GeneID:2302 KEGG:hsa:2302 UCSC:uc002jqx.3
            CTD:2302 GeneCards:GC17M074132 HGNC:HGNC:3816 HPA:HPA005714
            MIM:602291 MIM:607154 neXtProt:NX_Q92949 PharmGKB:PA28233
            HOGENOM:HOG000112631 HOVERGEN:HBG056832 InParanoid:Q92949 KO:K09402
            OMA:PVHIHPA OrthoDB:EOG40CHH5 PhylomeDB:Q92949 GenomeRNAi:2302
            NextBio:9347 Bgee:Q92949 CleanEx:HS_FOXJ1 Genevestigator:Q92949
            GermOnline:ENSG00000129654 GO:GO:0002508 GO:GO:0035089
            GO:GO:0072016 GO:GO:0050869 GO:GO:0002635 GO:GO:0045409
            GO:GO:0002897 GO:GO:1901248 Uniprot:Q92949
        Length = 421

 Score = 246 (91.7 bits), Expect = 1.6e-20, P = 1.6e-20
 Identities = 52/108 (48%), Positives = 71/108 (65%)

Query:     3 ITYKTG-NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             + Y T  ++K   SYA+LI +A+  +   ++TL+ IY++IT  F Y+R A+  W+NSIRH
Sbjct:   112 VDYATNPHVKPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQNSIRH 171

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAID--YNHTADDGPSKKKVKLPRV 107
             NLSLNKCF KV R KD+PGKG +W ID  Y      G  KK+ +LP V
Sbjct:   172 NLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKR-RLPPV 218


>UNIPROTKB|F1RWM7 [details] [associations]
            symbol:FOXJ1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:1901248 "positive regulation of lung ciliated cell
            differentiation" evidence=IEA] [GO:0072016 "glomerular parietal
            epithelial cell development" evidence=IEA] [GO:0060972 "left/right
            pattern formation" evidence=IEA] [GO:0050900 "leukocyte migration"
            evidence=IEA] [GO:0050869 "negative regulation of B cell
            activation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045409 "negative regulation of interleukin-6 biosynthetic
            process" evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
            [GO:0042130 "negative regulation of T cell proliferation"
            evidence=IEA] [GO:0035502 "metanephric part of ureteric bud
            development" evidence=IEA] [GO:0035089 "establishment of
            apical/basal cell polarity" evidence=IEA] [GO:0033085 "negative
            regulation of T cell differentiation in thymus" evidence=IEA]
            [GO:0032862 "activation of Rho GTPase activity" evidence=IEA]
            [GO:0032088 "negative regulation of NF-kappaB transcription factor
            activity" evidence=IEA] [GO:0030036 "actin cytoskeleton
            organization" evidence=IEA] [GO:0007420 "brain development"
            evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0002924 "negative
            regulation of humoral immune response mediated by circulating
            immunoglobulin" evidence=IEA] [GO:0002897 "positive regulation of
            central B cell tolerance induction" evidence=IEA] [GO:0002635
            "negative regulation of germinal center formation" evidence=IEA]
            [GO:0002508 "central tolerance induction" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0042130 GO:GO:0030036
            GO:GO:0050900 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0000122
            GO:GO:0042384 GO:GO:0032088 GO:GO:0006959 GO:GO:0033085
            GO:GO:0032862 GO:GO:0060972 GO:GO:0030856 GO:GO:0002924 CTD:2302
            KO:K09402 OMA:PVHIHPA GO:GO:0002508 GO:GO:0035089 GO:GO:0050869
            GO:GO:0002635 GO:GO:0045409 GO:GO:0002897
            GeneTree:ENSGT00700000104094 EMBL:FP680578 RefSeq:XP_003358007.1
            Ensembl:ENSSSCT00000018712 GeneID:100623071 KEGG:ssc:100623071
            Uniprot:F1RWM7
        Length = 421

 Score = 246 (91.7 bits), Expect = 1.6e-20, P = 1.6e-20
 Identities = 52/108 (48%), Positives = 71/108 (65%)

Query:     3 ITYKTG-NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             + Y T  ++K   SYA+LI +A+  +   ++TL+ IY++IT  F Y+R A+  W+NSIRH
Sbjct:   112 VDYATNPHVKPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQNSIRH 171

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAID--YNHTADDGPSKKKVKLPRV 107
             NLSLNKCF KV R KD+PGKG +W ID  Y      G  KK+ +LP V
Sbjct:   172 NLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKR-RLPPV 218


>MGI|MGI:1347474 [details] [associations]
            symbol:Foxj1 "forkhead box J1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=ISO]
            [GO:0001947 "heart looping" evidence=IBA] [GO:0002508 "central
            tolerance induction" evidence=IMP] [GO:0002635 "negative regulation
            of germinal center formation" evidence=IMP] [GO:0002897 "positive
            regulation of central B cell tolerance induction" evidence=IMP]
            [GO:0002924 "negative regulation of humoral immune response
            mediated by circulating immunoglobulin" evidence=IMP] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006959 "humoral immune response"
            evidence=IMP] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0019904 "protein domain specific binding" evidence=IBA]
            [GO:0030036 "actin cytoskeleton organization" evidence=IMP]
            [GO:0030324 "lung development" evidence=IBA] [GO:0030855
            "epithelial cell differentiation" evidence=IBA] [GO:0030856
            "regulation of epithelial cell differentiation" evidence=IDA]
            [GO:0032088 "negative regulation of NF-kappaB transcription factor
            activity" evidence=IMP] [GO:0032862 "activation of Rho GTPase
            activity" evidence=IDA] [GO:0033085 "negative regulation of T cell
            differentiation in thymus" evidence=IMP] [GO:0035089 "establishment
            of apical/basal cell polarity" evidence=IMP] [GO:0042130 "negative
            regulation of T cell proliferation" evidence=IMP] [GO:0042384
            "cilium assembly" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045409 "negative regulation of
            interleukin-6 biosynthetic process" evidence=IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO;IDA] [GO:0050869 "negative regulation of B
            cell activation" evidence=IMP] [GO:0050900 "leukocyte migration"
            evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IGI]
            [GO:0060972 "left/right pattern formation" evidence=IMP]
            [GO:1901248 "positive regulation of lung ciliated cell
            differentiation" evidence=ISO] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1347474
            GO:GO:0019904 GO:GO:0007420 GO:GO:0042130 GO:GO:0030036
            GO:GO:0030324 GO:GO:0050900 GO:GO:0043565 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:CH466558 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0003690
            GO:GO:0042384 GO:GO:0001947 GO:GO:0032088 GO:GO:0008134
            GO:GO:0006959 GO:GO:0030855 GO:GO:0033085 GO:GO:0032862
            eggNOG:COG5025 GO:GO:0060972 GO:GO:0030856 GO:GO:0002924 CTD:2302
            HOGENOM:HOG000112631 HOVERGEN:HBG056832 KO:K09402 OMA:PVHIHPA
            OrthoDB:EOG40CHH5 GO:GO:0002508 GO:GO:0035089 GO:GO:0050869
            GO:GO:0002635 GO:GO:0045409 GO:GO:0002897 EMBL:L13204 EMBL:AK140847
            EMBL:AL645861 IPI:IPI00123682 PIR:I49734 RefSeq:NP_032266.3
            UniGene:Mm.378938 ProteinModelPortal:Q61660 SMR:Q61660
            STRING:Q61660 Ensembl:ENSMUST00000036215 GeneID:15223
            KEGG:mmu:15223 GeneTree:ENSGT00700000104094 InParanoid:Q3US42
            ChiTaRS:FOXJ1 NextBio:287811 Bgee:Q61660 CleanEx:MM_FOXJ1
            Genevestigator:Q61660 GermOnline:ENSMUSG00000034227 Uniprot:Q61660
        Length = 421

 Score = 246 (91.7 bits), Expect = 1.6e-20, P = 1.6e-20
 Identities = 52/108 (48%), Positives = 71/108 (65%)

Query:     3 ITYKTG-NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             + Y T  ++K   SYA+LI +A+  +   ++TL+ IY++IT  F Y+R A+  W+NSIRH
Sbjct:   112 VDYATNPHVKPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQNSIRH 171

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAID--YNHTADDGPSKKKVKLPRV 107
             NLSLNKCF KV R KD+PGKG +W ID  Y      G  KK+ +LP V
Sbjct:   172 NLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKR-RLPPV 218


>RGD|621764 [details] [associations]
            symbol:Foxj1 "forkhead box J1" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=ISO]
            [GO:0001947 "heart looping" evidence=IBA] [GO:0002508 "central
            tolerance induction" evidence=ISO] [GO:0002635 "negative regulation
            of germinal center formation" evidence=ISO;IBA] [GO:0002897
            "positive regulation of central B cell tolerance induction"
            evidence=ISO;IBA] [GO:0002924 "negative regulation of humoral
            immune response mediated by circulating immunoglobulin"
            evidence=ISO;IBA] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006959 "humoral immune response" evidence=ISO]
            [GO:0007283 "spermatogenesis" evidence=IEP] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0014070 "response to organic
            cyclic compound" evidence=IEP] [GO:0019904 "protein domain specific
            binding" evidence=IBA] [GO:0030036 "actin cytoskeleton
            organization" evidence=ISO;IBA] [GO:0030324 "lung development"
            evidence=IBA] [GO:0030855 "epithelial cell differentiation"
            evidence=IBA] [GO:0030856 "regulation of epithelial cell
            differentiation" evidence=ISO] [GO:0032088 "negative regulation of
            NF-kappaB transcription factor activity" evidence=ISO;IBA]
            [GO:0032355 "response to estradiol stimulus" evidence=IEP]
            [GO:0032862 "activation of Rho GTPase activity" evidence=ISO;IBA]
            [GO:0033085 "negative regulation of T cell differentiation in
            thymus" evidence=ISO;IBA] [GO:0035089 "establishment of
            apical/basal cell polarity" evidence=ISO;IBA] [GO:0035502
            "metanephric part of ureteric bud development" evidence=ISO]
            [GO:0042130 "negative regulation of T cell proliferation"
            evidence=ISO;IBA] [GO:0042384 "cilium assembly" evidence=ISO;IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0045409 "negative regulation of interleukin-6 biosynthetic
            process" evidence=ISO;IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0050869 "negative regulation of B cell activation"
            evidence=ISO;IBA] [GO:0050900 "leukocyte migration"
            evidence=ISO;IBA] [GO:0060271 "cilium morphogenesis" evidence=ISO]
            [GO:0060428 "lung epithelium development" evidence=ISO] [GO:0060972
            "left/right pattern formation" evidence=ISO;IBA] [GO:0071363
            "cellular response to growth factor stimulus" evidence=IEP]
            [GO:0072016 "glomerular parietal epithelial cell development"
            evidence=ISO] [GO:1901248 "positive regulation of lung ciliated
            cell differentiation" evidence=ISO] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 RGD:621764
            GO:GO:0019904 GO:GO:0071363 GO:GO:0042130 GO:GO:0032355
            GO:GO:0030036 GO:GO:0030324 GO:GO:0050900 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007283 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0003690 GO:GO:0042384
            GO:GO:0001947 GO:GO:0032088 GO:GO:0008134 GO:GO:0030855
            GO:GO:0033085 GO:GO:0032862 GO:GO:0060972 GO:GO:0002924 CTD:2302
            HOVERGEN:HBG056832 KO:K09402 GO:GO:0035089 GO:GO:0050869
            GO:GO:0002635 GO:GO:0045409 GO:GO:0002897 EMBL:L36388
            IPI:IPI00206922 RefSeq:NP_446284.1 UniGene:Rn.202954
            ProteinModelPortal:Q63247 SMR:Q63247 GeneID:116557 KEGG:rno:116557
            NextBio:619213 Genevestigator:Q63247 Uniprot:Q63247
        Length = 421

 Score = 246 (91.7 bits), Expect = 1.6e-20, P = 1.6e-20
 Identities = 52/108 (48%), Positives = 71/108 (65%)

Query:     3 ITYKTG-NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             + Y T  ++K   SYA+LI +A+  +   ++TL+ IY++IT  F Y+R A+  W+NSIRH
Sbjct:   112 VDYATNPHVKPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQNSIRH 171

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAID--YNHTADDGPSKKKVKLPRV 107
             NLSLNKCF KV R KD+PGKG +W ID  Y      G  KK+ +LP V
Sbjct:   172 NLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKR-RLPPV 218


>UNIPROTKB|Q6F2E4 [details] [associations]
            symbol:foxd1 "Forkhead box protein D1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0001755 "neural crest cell migration" evidence=ISS;IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007398 "ectoderm development" evidence=ISS]
            [GO:0007399 "nervous system development" evidence=ISS] [GO:0007422
            "peripheral nervous system development" evidence=IBA] [GO:0007498
            "mesoderm development" evidence=ISS] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0030336
            "negative regulation of cell migration" evidence=ISS] [GO:0030513
            "positive regulation of BMP signaling pathway" evidence=IBA]
            [GO:0030900 "forebrain development" evidence=ISS] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0048484 "enteric nervous
            system development" evidence=IBA] [GO:0048485 "sympathetic nervous
            system development" evidence=IBA] [GO:0048846 "axon extension
            involved in axon guidance" evidence=IBA] [GO:0048937 "lateral line
            nerve glial cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IBA] [GO:0090184 "positive
            regulation of kidney development" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0007498
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0030900
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0030336
            GO:GO:0009790 GO:GO:0003690 GO:GO:0030513 GO:GO:0051216
            GO:GO:0008134 GO:GO:0007389 GO:GO:0007398 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 eggNOG:COG5025 GeneTree:ENSGT00700000104135 KO:K09397
            GO:GO:0048937 HSSP:Q63245 CTD:2297 HOVERGEN:HBG051641
            OrthoDB:EOG45MN6S GO:GO:0060678 GO:GO:0050935 HOGENOM:HOG000231285
            EMBL:AC149037 EMBL:BC081361 RefSeq:NP_001008148.1 UniGene:Str.9073
            ProteinModelPortal:Q6F2E4 SMR:Q6F2E4 STRING:Q6F2E4
            Ensembl:ENSXETT00000036667 GeneID:493510 KEGG:xtr:493510
            Xenbase:XB-GENE-488077 InParanoid:Q6F2E4 Bgee:Q6F2E4 Uniprot:Q6F2E4
        Length = 329

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 43/79 (54%), Positives = 58/79 (73%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI  +P+ R+TL+EI +FI++ FPYYRE    W+NSIRHNLSLN CF
Sbjct:    67 VKPPYSYIALITMAILQSPKKRLTLSEICEFISNRFPYYREKFPAWQNSIRHNLSLNDCF 126

Query:    70 TKVARPKDDPGKGSYWAID 88
              K+ R   +PGKG+YW +D
Sbjct:   127 VKIPREPGNPGKGNYWTLD 145


>UNIPROTKB|F1ME54 [details] [associations]
            symbol:FOXE1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0060465 "pharynx development" evidence=IEA] [GO:0060023
            "soft palate development" evidence=IEA] [GO:0060022 "hard palate
            development" evidence=IEA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0031069 "hair follicle
            morphogenesis" evidence=IEA] [GO:0030878 "thyroid gland
            development" evidence=IEA] [GO:0016477 "cell migration"
            evidence=IEA] [GO:0006590 "thyroid hormone generation"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045893 GO:GO:0016477
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0048538 GO:GO:0060465 GO:GO:0031069
            GO:GO:0006590 GO:GO:0060023 GO:GO:0060022 GO:GO:0030878
            GeneTree:ENSGT00700000104135 CTD:2304 KO:K09398 OMA:TGYQPAG
            GO:GO:0048562 EMBL:DAAA02023246 IPI:IPI00702358
            RefSeq:XP_002689770.1 RefSeq:XP_873930.3 UniGene:Bt.87684
            Ensembl:ENSBTAT00000019638 GeneID:616734 KEGG:bta:616734
            NextBio:20900290 Uniprot:F1ME54
        Length = 373

 Score = 243 (90.6 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 45/81 (55%), Positives = 60/81 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI++AP+ R+TL  IY+FIT  FP+YR+    W+NSIRHNL+LN CF K+ R
Sbjct:    58 SYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPR 117

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
                 PGKG+YWA+D N  A+D
Sbjct:   118 EAGRPGKGNYWALDPN--AED 136


>UNIPROTKB|O00358 [details] [associations]
            symbol:FOXE1 "Forkhead box protein E1" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISS;NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0009653 "anatomical structure morphogenesis"
            evidence=NAS] [GO:0002089 "lens morphogenesis in camera-type eye"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006590 "thyroid hormone generation"
            evidence=ISS;IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0016477 "cell migration" evidence=ISS;IBA] [GO:0031069 "hair
            follicle morphogenesis" evidence=ISS;IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048484 "enteric nervous system development"
            evidence=IRD] [GO:0048485 "sympathetic nervous system development"
            evidence=IRD] [GO:0048562 "embryonic organ morphogenesis"
            evidence=ISS;IBA] [GO:0048846 "axon extension involved in axon
            guidance" evidence=IRD] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IRD] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0060022 "hard palate development" evidence=IMP]
            [GO:0060023 "soft palate development" evidence=IMP] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0030878 "thyroid gland development" evidence=IEP;IMP]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0048538 "thymus
            development" evidence=IEP] [GO:0060465 "pharynx development"
            evidence=IEP] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0016477 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 EMBL:CH471105
            GO:GO:0003690 GO:GO:0048538 GO:GO:0008134 GO:GO:0007389
            GO:GO:0060465 GO:GO:0051090 GO:GO:0031069 GO:GO:0006590
            Orphanet:146 GO:GO:0002089 GO:GO:0060023 eggNOG:COG5025
            GO:GO:0060022 GO:GO:0030878 EMBL:X94553 EMBL:U89995 EMBL:Y13386
            EMBL:AL499604 IPI:IPI00879523 RefSeq:NP_004464.2 UniGene:Hs.159234
            ProteinModelPortal:O00358 SMR:O00358 STRING:O00358
            PhosphoSite:O00358 PRIDE:O00358 DNASU:2304 Ensembl:ENST00000375123
            GeneID:2304 KEGG:hsa:2304 UCSC:uc004axu.3 CTD:2304
            GeneCards:GC09P100615 H-InvDB:HIX0034929 HGNC:HGNC:3806 MIM:241850
            MIM:602617 neXtProt:NX_O00358 Orphanet:95713 Orphanet:1226
            Orphanet:95720 PharmGKB:PA28223 HOGENOM:HOG000231286
            HOVERGEN:HBG051642 InParanoid:O00358 KO:K09398 OMA:TGYQPAG
            GenomeRNAi:2304 NextBio:9355 Bgee:O00358 CleanEx:HS_FOXE1
            CleanEx:HS_TTF2 Genevestigator:O00358 GermOnline:ENSG00000178919
            GO:GO:0048562 Uniprot:O00358
        Length = 373

 Score = 243 (90.6 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 45/81 (55%), Positives = 60/81 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI++AP+ R+TL  IY+FIT  FP+YR+    W+NSIRHNL+LN CF K+ R
Sbjct:    57 SYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPR 116

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
                 PGKG+YWA+D N  A+D
Sbjct:   117 EAGRPGKGNYWALDPN--AED 135


>UNIPROTKB|F1SSG9 [details] [associations]
            symbol:FOXE1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060465 "pharynx development" evidence=IEA] [GO:0060023
            "soft palate development" evidence=IEA] [GO:0060022 "hard palate
            development" evidence=IEA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0031069 "hair follicle
            morphogenesis" evidence=IEA] [GO:0030878 "thyroid gland
            development" evidence=IEA] [GO:0016477 "cell migration"
            evidence=IEA] [GO:0006590 "thyroid hormone generation"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045893 GO:GO:0016477
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0048538 GO:GO:0060465 GO:GO:0031069
            GO:GO:0006590 GO:GO:0060023 GO:GO:0060022 GO:GO:0030878
            GeneTree:ENSGT00700000104135 KO:K09398 OMA:TGYQPAG GO:GO:0048562
            EMBL:CU234153 RefSeq:XP_001925267.1 UniGene:Ssc.95528
            Ensembl:ENSSSCT00000005909 GeneID:100157892 KEGG:ssc:100157892
            Uniprot:F1SSG9
        Length = 373

 Score = 243 (90.6 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 45/81 (55%), Positives = 60/81 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI++AP+ R+TL  IY+FIT  FP+YR+    W+NSIRHNL+LN CF K+ R
Sbjct:    58 SYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPR 117

Query:    75 PKDDPGKGSYWAIDYNHTADD 95
                 PGKG+YWA+D N  A+D
Sbjct:   118 EAGRPGKGNYWALDPN--AED 136


>UNIPROTKB|E9PM37 [details] [associations]
            symbol:FOXK2 "Forkhead box protein K2" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 EMBL:AC124287 HGNC:HGNC:6036
            ChiTaRS:FOXK2 EMBL:AC124283 IPI:IPI01013081
            ProteinModelPortal:E9PM37 SMR:E9PM37 Ensembl:ENST00000531030
            ArrayExpress:E9PM37 Bgee:E9PM37 Uniprot:E9PM37
        Length = 172

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 45/74 (60%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AI+ AP  ++TLN IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:    73 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 132

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   133 SQEEPGKGSFWRID 146


>UNIPROTKB|E9PPI7 [details] [associations]
            symbol:FOXK2 "Forkhead box protein K2" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 EMBL:AC124287 HGNC:HGNC:6036
            ChiTaRS:FOXK2 EMBL:AC124283 IPI:IPI00982638 Ensembl:ENST00000526383
            ArrayExpress:E9PPI7 Bgee:E9PPI7 Uniprot:E9PPI7
        Length = 254

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 45/74 (60%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AI+ AP  ++TLN IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   142 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 201

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   202 SQEEPGKGSFWRID 215


>FB|FBgn0004895 [details] [associations]
            symbol:fd64A "forkhead domain 64A" species:7227 "Drosophila
            melanogaster" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=IC;NAS] [GO:0009790 "embryo development"
            evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0048665 "neuron fate specification" evidence=IBA]
            [GO:0035058 "nonmotile primary cilium assembly" evidence=IBA]
            [GO:0002052 "positive regulation of neuroblast proliferation"
            evidence=IBA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IBA] [GO:0045787 "positive regulation of
            cell cycle" evidence=IBA] [GO:0009953 "dorsal/ventral pattern
            formation" evidence=IBA] [GO:0007380 "specification of segmental
            identity, head" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0016199 "axon midline choice point recognition"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0009792 GO:GO:0007346 EMBL:AE014296 GO:GO:0043565
            GO:GO:0045944 GO:GO:0016199 GO:GO:0045665 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0009953 GO:GO:0008134 GO:GO:0048665
            GO:GO:0045787 GO:GO:0002052 GO:GO:0051090 GO:GO:0035058
            eggNOG:COG5025 GO:GO:0007380 GO:GO:0009888 EMBL:M96441 PIR:B46178
            RefSeq:NP_001246609.1 RefSeq:NP_523912.1 UniGene:Dm.23970
            ProteinModelPortal:Q02360 SMR:Q02360 DIP:DIP-19169N IntAct:Q02360
            MINT:MINT-290862 STRING:Q02360 EnsemblMetazoa:FBtr0073192
            EnsemblMetazoa:FBtr0309789 GeneID:38471 KEGG:dme:Dmel_CG1132
            CTD:38471 FlyBase:FBgn0004895 GeneTree:ENSGT00690000101636
            InParanoid:Q02360 KO:K09411 OMA:PNYSDRI OrthoDB:EOG47D7XZ
            PhylomeDB:Q02360 GenomeRNAi:38471 NextBio:808831 Bgee:Q02360
            GermOnline:CG1132 Uniprot:Q02360
        Length = 365

 Score = 241 (89.9 bits), Expect = 2.4e-20, P = 2.4e-20
 Identities = 47/80 (58%), Positives = 56/80 (70%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AIS+AP  R+TL+ IY+FI   FPYYRE   GW+NSIRHNLSLN CF K+ R
Sbjct:    95 SYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQNSIRHNLSLNDCFVKIPR 154

Query:    75 PK------DDPGKGSYWAID 88
              K      D  GKGSYW +D
Sbjct:   155 DKNTIEDNDSAGKGSYWMLD 174


>UNIPROTKB|Q9DGG2 [details] [associations]
            symbol:FOXK1 "Winged helix protein CWH-5" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0006357 "regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0030308
            "negative regulation of cell growth" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0045892 GO:GO:0045893 GO:GO:0005730
            GO:GO:0030308 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006357 GO:GO:0006351 eggNOG:COG5025
            HSSP:Q01167 GeneTree:ENSGT00700000104094 HOGENOM:HOG000072588
            EMBL:AADN02023808 OrthoDB:EOG4QRH3W HOVERGEN:HBG098671 EMBL:U37276
            IPI:IPI00818763 UniGene:Gga.11863 UniGene:Gga.51502
            Ensembl:ENSGALT00000040858 InParanoid:Q9DGG2 Uniprot:Q9DGG2
        Length = 108

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 45/74 (60%), Positives = 57/74 (77%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AIS+AP  ++TL+ IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:    14 SYAQLIVQAISSAPDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 73

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:    74 SQEEPGKGSFWRID 87


>ZFIN|ZDB-GENE-040426-2094 [details] [associations]
            symbol:foxd1 "forkhead box D1" species:7955 "Danio
            rerio" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0090184 "positive regulation of kidney
            development" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0048485 "sympathetic nervous system development"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IBA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IBA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0001755 "neural crest cell migration"
            evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0048846 "axon extension involved in axon
            guidance" evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0048937 "lateral line nerve glial cell development"
            evidence=IBA] [GO:0048484 "enteric nervous system development"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 ZFIN:ZDB-GENE-040426-2094
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 KO:K09397 GO:GO:0048937 HOVERGEN:HBG051641
            GO:GO:0060678 GO:GO:0050935 HSSP:Q01167 EMBL:BC067138
            IPI:IPI00501340 RefSeq:NP_998078.1 UniGene:Dr.82970
            ProteinModelPortal:Q6NXD6 SMR:Q6NXD6 GeneID:405849 KEGG:dre:405849
            CTD:405849 InParanoid:Q6NXD6 NextBio:20817811 Uniprot:Q6NXD6
        Length = 343

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 43/79 (54%), Positives = 57/79 (72%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI  +P+ R+TL+EI  FI++ FPYYRE    W+NSIRHNLSLN CF
Sbjct:    73 VKPPYSYIALITMAILQSPKKRLTLSEICDFISNRFPYYREKFPAWQNSIRHNLSLNDCF 132

Query:    70 TKVARPKDDPGKGSYWAID 88
              K+ R   +PGKG+YW +D
Sbjct:   133 VKIPREPGNPGKGNYWTLD 151


>MGI|MGI:1347463 [details] [associations]
            symbol:Foxd1 "forkhead box D1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001658 "branching
            involved in ureteric bud morphogenesis" evidence=IDA] [GO:0001755
            "neural crest cell migration" evidence=IBA] [GO:0001822 "kidney
            development" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IMP] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=ISO;IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010628
            "positive regulation of gene expression" evidence=IMP] [GO:0030318
            "melanocyte differentiation" evidence=IBA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=IMP]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0048484 "enteric nervous
            system development" evidence=IBA] [GO:0048485 "sympathetic nervous
            system development" evidence=IBA] [GO:0048846 "axon extension
            involved in axon guidance" evidence=IBA] [GO:0048937 "lateral line
            nerve glial cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IMP] [GO:0072076 "nephrogenic
            mesenchyme development" evidence=IMP] [GO:0072210 "metanephric
            nephron development" evidence=IMP] [GO:0072213 "metanephric capsule
            development" evidence=IMP] [GO:0072267 "metanephric capsule
            specification" evidence=IMP] [GO:0072268 "pattern specification
            involved in metanephros development" evidence=IMP] [GO:0090184
            "positive regulation of kidney development" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1347463 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0030513 GO:GO:0051216 GO:GO:0008134
            GO:GO:0072210 GO:GO:0048485 GO:GO:0030318 GO:GO:0048484
            GO:GO:0051090 GO:GO:0090184 GO:GO:0048846 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 KO:K09397 GO:GO:0048937 CTD:2297
            HOVERGEN:HBG051641 GO:GO:0060678 GO:GO:0050935 GO:GO:0072267
            EMBL:L38607 EMBL:AK132390 EMBL:AK142034 IPI:IPI00120011
            RefSeq:NP_032268.2 UniGene:Mm.347441 ProteinModelPortal:Q61345
            SMR:Q61345 STRING:Q61345 PhosphoSite:Q61345 PRIDE:Q61345
            Ensembl:ENSMUST00000105098 GeneID:15229 KEGG:mmu:15229
            HOGENOM:HOG000231285 InParanoid:Q3UQW8 OMA:GLQLQPY NextBio:287823
            Bgee:Q61345 CleanEx:MM_FOXD1 Genevestigator:Q61345 GO:GO:0072076
            Uniprot:Q61345
        Length = 456

 Score = 245 (91.3 bits), Expect = 3.0e-20, P = 3.0e-20
 Identities = 52/112 (46%), Positives = 73/112 (65%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI  +P+ R+TL+EI +FI+  FPYYRE    W+NSIRHNLSLN CF
Sbjct:   129 VKPPYSYIALITMAILQSPKKRLTLSEICEFISSRFPYYREKFPAWQNSIRHNLSLNDCF 188

Query:    70 TKVARPKDDPGKGSYWAIDYNHTAD--DGPS----KKKVKL-PRVSPYSPVE 114
              K+ R   +PGKG+YW +D   +AD  D  S    +K+ K  P ++P++  E
Sbjct:   189 VKIPREPGNPGKGNYWTLD-PESADMFDNGSFLRRRKRFKRQPLLAPHAAAE 239


>UNIPROTKB|H9L2W5 [details] [associations]
            symbol:FOXD1 "Forkhead box protein D1" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0001829 "trophectodermal cell
            differentiation" evidence=IEA] [GO:0001892 "embryonic placenta
            development" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GeneTree:ENSGT00700000104135 EMBL:AADN02041744
            Ensembl:ENSGALT00000036037 OMA:SSICEFI Uniprot:H9L2W5
        Length = 104

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 43/83 (51%), Positives = 59/83 (71%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K+  +K   SY +LI +AI  +PQ ++TL+ I +FI++ FPYYRE    W+NSIRHNLSL
Sbjct:     1 KSSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSL 60

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             N CF K+ R   +PGKG+YW +D
Sbjct:    61 NDCFVKIPREPGNPGKGNYWTLD 83


>RGD|621712 [details] [associations]
            symbol:Foxd1 "forkhead box D1" species:10116 "Rattus norvegicus"
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=ISO] [GO:0001755 "neural crest cell migration"
            evidence=IBA] [GO:0001822 "kidney development" evidence=ISO]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007411 "axon guidance"
            evidence=ISO] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=ISO;IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010628
            "positive regulation of gene expression" evidence=ISO;ISS]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0030513
            "positive regulation of BMP signaling pathway"
            evidence=ISO;ISS;IBA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA;ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO;IBA] [GO:0048484 "enteric nervous system
            development" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IBA] [GO:0048846 "axon extension involved in
            axon guidance" evidence=IBA] [GO:0048937 "lateral line nerve glial
            cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=ISO;ISS;IBA] [GO:0072076
            "nephrogenic mesenchyme development" evidence=IEA;ISO] [GO:0072210
            "metanephric nephron development" evidence=IEA;ISO] [GO:0072213
            "metanephric capsule development" evidence=ISO;ISS] [GO:0072267
            "metanephric capsule specification" evidence=ISO;ISS] [GO:0072268
            "pattern specification involved in metanephros development"
            evidence=ISO] [GO:0090184 "positive regulation of kidney
            development" evidence=ISO;ISS;IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 RGD:621712
            GO:GO:0045892 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0030513 GO:GO:0051216 GO:GO:0008134 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 eggNOG:COG5025 GO:GO:0048937 GO:GO:0060678
            GO:GO:0050935 GO:GO:0072267 HOGENOM:HOG000231285 EMBL:L13192
            IPI:IPI00551801 PIR:I60922 UniGene:Rn.50822
            ProteinModelPortal:Q63251 SMR:Q63251 STRING:Q63251 UCSC:RGD:621712
            InParanoid:Q63251 ArrayExpress:Q63251 Genevestigator:Q63251
            GermOnline:ENSRNOG00000007759 Uniprot:Q63251
        Length = 101

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 43/79 (54%), Positives = 57/79 (72%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI  +P+ R+TL+EI +FI+  FPYYRE    W+NSIRHNLSLN CF
Sbjct:     2 VKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCF 61

Query:    70 TKVARPKDDPGKGSYWAID 88
              K+ R   +PGKG+YW +D
Sbjct:    62 VKIPREPGNPGKGNYWTLD 80


>ZFIN|ZDB-GENE-990415-76 [details] [associations]
            symbol:foxa "forkhead box A sequence" species:7955
            "Danio rerio" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IBA]
            [GO:0060441 "epithelial tube branching involved in lung
            morphogenesis" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0010817 "regulation of
            hormone levels" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0048665 "neuron fate specification"
            evidence=IBA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0042593 "glucose homeostasis" evidence=IBA] [GO:0060487 "lung
            epithelial cell differentiation" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-990415-76 GO:GO:0019904 GO:GO:0043565 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0045666 GO:GO:0008134 GO:GO:0007389 GO:GO:0060487
            GO:GO:0048665 GO:GO:0051090 GO:GO:0010817 GO:GO:0060441
            eggNOG:COG5025 HSSP:Q99958 HOGENOM:HOG000231817 CTD:30539
            EMBL:AF052247 IPI:IPI00631514 RefSeq:NP_571357.1 UniGene:Dr.75815
            ProteinModelPortal:O73780 SMR:O73780 STRING:O73780 GeneID:30539
            KEGG:dre:30539 HOVERGEN:HBG108363 NextBio:20806920
            ArrayExpress:O73780 Uniprot:O73780
        Length = 343

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 46/91 (50%), Positives = 60/91 (65%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  +P  R+TLNEIY +I   FPYYR+    W+NSIRH+LS N CF +V R
Sbjct:    93 SYISLICMAIQQSPAKRLTLNEIYDWIRQLFPYYRQNQQRWQNSIRHSLSFNDCFVRVPR 152

Query:    75 PKDDPGKGSYWAI--DYNHTADDGPSKKKVK 103
               D PGKGSYWA+  D  +  ++G   ++ K
Sbjct:   153 SPDSPGKGSYWALHPDSGNMFENGCYMRRQK 183


>FB|FBgn0036134 [details] [associations]
            symbol:fd68A "forkhead domain 68A" species:7227 "Drosophila
            melanogaster" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS;IDA] [GO:0005634
            "nucleus" evidence=ISS;IDA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0000287 "magnesium ion binding" evidence=IBA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339 EMBL:AE014296
            GO:GO:0000287 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0009888
            GeneTree:ENSGT00700000104094 FlyBase:FBgn0036134 UniGene:Dm.7143
            GeneID:39252 KEGG:dme:Dmel_CG11799 CTD:39252 GenomeRNAi:39252
            NextBio:812710 EMBL:BT023507 RefSeq:NP_648440.2 RefSeq:NP_729673.2
            RefSeq:NP_729674.2 RefSeq:NP_729675.2 SMR:Q8IQE9 STRING:Q8IQE9
            EnsemblMetazoa:FBtr0300783 EnsemblMetazoa:FBtr0300784
            EnsemblMetazoa:FBtr0300785 EnsemblMetazoa:FBtr0300786
            UCSC:CG11799-RE InParanoid:Q8IQE9 OMA:RFPSTEI Uniprot:Q8IQE9
        Length = 746

 Score = 249 (92.7 bits), Expect = 3.7e-20, P = 3.7e-20
 Identities = 50/81 (61%), Positives = 59/81 (72%)

Query:     9 NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYR-EANAGWKNSIRHNLSLNK 67
             N K   SYA LI  AIS AP  ++TL+ IY FI   +PYYR E N GW+NSIRHNLSLN+
Sbjct:   451 NEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHYPYYRKETNKGWQNSIRHNLSLNR 510

Query:    68 CFTKVARPKDDPGKGSYWAID 88
              F KVAR +D+PGKGS+W ID
Sbjct:   511 YFIKVARSQDEPGKGSFWRID 531


>ZFIN|ZDB-GENE-060929-1178 [details] [associations]
            symbol:foxj1a "forkhead box J1a" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0045409 "negative
            regulation of interleukin-6 biosynthetic process" evidence=IBA]
            [GO:0002635 "negative regulation of germinal center formation"
            evidence=IBA] [GO:0019904 "protein domain specific binding"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0035089 "establishment of apical/basal cell
            polarity" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0030324 "lung development" evidence=IBA]
            [GO:0002897 "positive regulation of central B cell tolerance
            induction" evidence=IBA] [GO:0050900 "leukocyte migration"
            evidence=IBA] [GO:0032088 "negative regulation of NF-kappaB
            transcription factor activity" evidence=IBA] [GO:0050869 "negative
            regulation of B cell activation" evidence=IBA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0060972 "left/right pattern formation"
            evidence=IBA] [GO:0033085 "negative regulation of T cell
            differentiation in thymus" evidence=IBA] [GO:0030036 "actin
            cytoskeleton organization" evidence=IBA] [GO:0030855 "epithelial
            cell differentiation" evidence=IBA] [GO:0042130 "negative
            regulation of T cell proliferation" evidence=IBA] [GO:0032862
            "activation of Rho GTPase activity" evidence=IBA] [GO:0002924
            "negative regulation of humoral immune response mediated by
            circulating immunoglobulin" evidence=IBA] [GO:0009611 "response to
            wounding" evidence=IMP] [GO:0060296 "regulation of cilium beat
            frequency involved in ciliary motility" evidence=IMP] [GO:0003351
            "epithelial cilium movement" evidence=IMP] [GO:0042384 "cilium
            assembly" evidence=IDA;IMP] [GO:0060271 "cilium morphogenesis"
            evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0007368 "determination of left/right
            symmetry" evidence=IMP] [GO:0003146 "heart jogging" evidence=IMP]
            [GO:0001947 "heart looping" evidence=IMP] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-060929-1178 GO:GO:0019904 GO:GO:0009611 GO:GO:0042130
            GO:GO:0030036 GO:GO:0030324 GO:GO:0050900 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0042384 GO:GO:0001947
            GO:GO:0032088 GO:GO:0008134 GO:GO:0030855 GO:GO:0060296
            GO:GO:0033085 GO:GO:0003146 GO:GO:0032862 GO:GO:0060972
            GO:GO:0003351 GO:GO:0002924 HOVERGEN:HBG056832 GO:GO:0035089
            GO:GO:0050869 GO:GO:0002635 GO:GO:0045409 GO:GO:0002897
            EMBL:BC124228 EMBL:BC164538 IPI:IPI00803915 UniGene:Dr.79389
            SMR:Q08CI2 STRING:Q08CI2 InParanoid:Q08CI2 Uniprot:Q08CI2
        Length = 458

 Score = 244 (91.0 bits), Expect = 3.9e-20, P = 3.9e-20
 Identities = 52/108 (48%), Positives = 74/108 (68%)

Query:     3 ITYKTG-NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             + YK+  +IK   SYA+LI +A+  + + ++TL+ IY++IT  F Y+R A+  W++SIRH
Sbjct:   133 VDYKSNPHIKPPYSYATLICMAMQASKKTKITLSCIYKWITDNFCYFRHADPTWQSSIRH 192

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAID--YNHTADDGPSKKKVKLPRV 107
             NLSLNKCF KV R KD+PGKG +W ID  Y     +G  KK+ +LP V
Sbjct:   193 NLSLNKCFIKVPRQKDEPGKGGFWKIDPQYAERLLNGAYKKR-RLPPV 239


>ZFIN|ZDB-GENE-980526-423 [details] [associations]
            symbol:foxa3 "forkhead box A3" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA;IBA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0019904 "protein domain specific
            binding" evidence=IEA;IBA] [GO:0048319 "axial mesoderm
            morphogenesis" evidence=IGI;IMP] [GO:0033504 "floor plate
            development" evidence=IMP] [GO:0048785 "hatching gland development"
            evidence=IMP] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0001678 "cellular glucose homeostasis" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IRD] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0008301
            "DNA binding, bending" evidence=IBA] [GO:0070368 "positive
            regulation of hepatocyte differentiation" evidence=IBA] [GO:0008285
            "negative regulation of cell proliferation" evidence=IBA]
            [GO:0060487 "lung epithelial cell differentiation" evidence=IRD]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0048665 "neuron fate
            specification" evidence=IBA] [GO:0009267 "cellular response to
            starvation" evidence=IBA] [GO:0007420 "brain development"
            evidence=IGI] [GO:0021999 "neural plate anterior/posterior
            regionalization" evidence=IGI] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-980526-423 GO:GO:0019904 GO:GO:0008285
            GO:GO:0007420 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0009267 GO:GO:0008134 GO:GO:0048665
            GO:GO:0051090 GO:GO:0001678 GO:GO:0021999 GO:GO:0033504
            GeneTree:ENSGT00700000104475 GO:GO:0048319 InterPro:IPR018533
            Pfam:PF09354 HOVERGEN:HBG006621 GO:GO:0070368 EMBL:BX908751
            GO:GO:0048785 EMBL:BC162391 IPI:IPI00505867 UniGene:Dr.1307
            SMR:Q1LV18 STRING:Q1LV18 Ensembl:ENSDART00000010813
            InParanoid:Q1LV18 OMA:NLMSNEQ Uniprot:Q1LV18
        Length = 441

 Score = 243 (90.6 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 46/76 (60%), Positives = 53/76 (69%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  +    +TLNEIYQ+I   FPYYRE    W+NSIRH+LS N CF KVAR
Sbjct:   147 SYISLITMAIQQSQSKMLTLNEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVAR 206

Query:    75 PKDDPGKGSYWAIDYN 90
               D PGKGSYWA+  N
Sbjct:   207 SPDKPGKGSYWALHPN 222


>ZFIN|ZDB-GENE-030131-2861 [details] [associations]
            symbol:foxk2 "forkhead box K2" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0000287 "magnesium
            ion binding" evidence=IBA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339
            ZFIN:ZDB-GENE-030131-2861 GO:GO:0000287 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:2.60.200.20
            SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0009888 HOGENOM:HOG000072588 HOVERGEN:HBG051649
            EMBL:BC159229 IPI:IPI00493023 UniGene:Dr.77018 ArrayExpress:B0JZL4
            Uniprot:B0JZL4
        Length = 585

 Score = 246 (91.7 bits), Expect = 4.7e-20, P = 4.7e-20
 Identities = 46/74 (62%), Positives = 57/74 (77%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AI+ AP  ++TLN IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KVAR
Sbjct:   249 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVAR 308

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   309 SQEEPGKGSFWRID 322


>ZFIN|ZDB-GENE-980526-143 [details] [associations]
            symbol:foxd3 "forkhead box D3" species:7955 "Danio
            rerio" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA;IDA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0009790 "embryo
            development" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0001822
            "kidney development" evidence=IBA] [GO:0048846 "axon extension
            involved in axon guidance" evidence=IBA] [GO:0001658 "branching
            involved in ureteric bud morphogenesis" evidence=IBA] [GO:0008301
            "DNA binding, bending" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IGI] [GO:0010629 "negative regulation of gene expression"
            evidence=IGI;IMP] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0060351 "cartilage
            development involved in endochondral bone morphogenesis"
            evidence=IMP] [GO:0014032 "neural crest cell development"
            evidence=IGI;IMP] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA;IDA] [GO:0001071 "nucleic acid binding transcription
            factor activity" evidence=IDA] [GO:0051216 "cartilage development"
            evidence=IMP] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IMP] [GO:0048484 "enteric nervous system
            development" evidence=IMP] [GO:0050935 "iridophore differentiation"
            evidence=IMP] [GO:0007422 "peripheral nervous system development"
            evidence=IMP] [GO:0050931 "pigment cell differentiation"
            evidence=IGI;IMP] [GO:0048485 "sympathetic nervous system
            development" evidence=IMP] [GO:0001755 "neural crest cell
            migration" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-980526-143 GO:GO:0045892 GO:GO:0001755 GO:GO:0043565
            GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0001822 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0001658 GO:GO:0048485 GO:GO:0030318 GO:GO:0048484
            GO:GO:0051090 GO:GO:0048846 GO:GO:0060351 GO:GO:0048937
            HOVERGEN:HBG051641 GO:GO:0050935 EMBL:BC095603 IPI:IPI00512255
            UniGene:Dr.75816 ProteinModelPortal:Q502Q4 SMR:Q502Q4
            InParanoid:Q502Q4 ArrayExpress:Q502Q4 Uniprot:Q502Q4
        Length = 371

 Score = 239 (89.2 bits), Expect = 4.9e-20, P = 4.9e-20
 Identities = 43/83 (51%), Positives = 59/83 (71%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K+  +K   SY +LI +AI  +PQ ++TL+ I +FI++ FPYYRE    W+NSIRHNLSL
Sbjct:    91 KSSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSL 150

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             N CF K+ R   +PGKG+YW +D
Sbjct:   151 NDCFVKIPREPGNPGKGNYWTLD 173


>ZFIN|ZDB-GENE-030131-6402 [details] [associations]
            symbol:foxk1 "forkhead box K1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0008301 "DNA binding,
            bending" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0000287 "magnesium ion binding" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0009790 "embryo
            development" evidence=IBA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000253 InterPro:IPR001766 InterPro:IPR008984
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039
            SMART:SM00240 SMART:SM00339 ZFIN:ZDB-GENE-030131-6402 GO:GO:0000287
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888
            HSSP:Q01167 GeneTree:ENSGT00700000104094 CTD:221937
            HOGENOM:HOG000072588 HOVERGEN:HBG051649 KO:K09404 OMA:CEVGPKE
            EMBL:BX649536 EMBL:BC054664 IPI:IPI00500567 RefSeq:NP_956196.1
            UniGene:Dr.81025 SMR:Q7SYM1 Ensembl:ENSDART00000055201
            GeneID:334470 KEGG:dre:334470 InParanoid:Q7SYM1 OrthoDB:EOG4QRH3W
            NextBio:20810416 Uniprot:Q7SYM1
        Length = 639

 Score = 231 (86.4 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
 Identities = 43/74 (58%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AIS+A   ++TL+ IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   262 SYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 321

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W +D
Sbjct:   322 SQEEPGKGSFWRVD 335

 Score = 39 (18.8 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query:   126 NSKPPTSISSVPNTVSFFSDPLQ 148
             N K    ++S+P +    ++PLQ
Sbjct:   558 NGKHALPVTSIPTSAYALTNPLQ 580


>MGI|MGI:1347470 [details] [associations]
            symbol:Foxf1 "forkhead box F1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0001568 "blood vessel
            development" evidence=ISO] [GO:0001570 "vasculogenesis"
            evidence=IMP] [GO:0001701 "in utero embryonic development"
            evidence=ISO;IMP] [GO:0001756 "somitogenesis" evidence=IMP]
            [GO:0001763 "morphogenesis of a branching structure" evidence=ISO]
            [GO:0002053 "positive regulation of mesenchymal cell proliferation"
            evidence=IMP] [GO:0003197 "endocardial cushion development"
            evidence=ISO] [GO:0003214 "cardiac left ventricle morphogenesis"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO;IDA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007224 "smoothened signaling pathway" evidence=IDA]
            [GO:0007368 "determination of left/right symmetry" evidence=IMP]
            [GO:0007494 "midgut development" evidence=ISO] [GO:0007498
            "mesoderm development" evidence=IGI;IMP] [GO:0007507 "heart
            development" evidence=ISO] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009887 "organ morphogenesis" evidence=IMP]
            [GO:0010811 "positive regulation of cell-substrate adhesion"
            evidence=IMP] [GO:0014822 "detection of wounding" evidence=IMP]
            [GO:0016337 "cell-cell adhesion" evidence=IMP] [GO:0030198
            "extracellular matrix organization" evidence=IGI] [GO:0030323
            "respiratory tube development" evidence=ISO] [GO:0030324 "lung
            development" evidence=ISO;IMP] [GO:0030335 "positive regulation of
            cell migration" evidence=IMP] [GO:0031016 "pancreas development"
            evidence=ISO] [GO:0043305 "negative regulation of mast cell
            degranulation" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0044212 "transcription regulatory region
            DNA binding" evidence=IDA] [GO:0045198 "establishment of epithelial
            cell apical/basal polarity" evidence=IGI] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IMP;IDA] [GO:0048286 "lung
            alveolus development" evidence=IMP] [GO:0048371 "lateral mesodermal
            cell differentiation" evidence=IMP] [GO:0048557 "embryonic
            digestive tract morphogenesis" evidence=ISO] [GO:0048565 "digestive
            tract development" evidence=ISO] [GO:0048566 "embryonic digestive
            tract development" evidence=IGI] [GO:0048613 "embryonic ectodermal
            digestive tract morphogenesis" evidence=ISO] [GO:0048617 "embryonic
            foregut morphogenesis" evidence=IMP] [GO:0050728 "negative
            regulation of inflammatory response" evidence=IMP] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0051145 "smooth muscle cell
            differentiation" evidence=IMP] [GO:0051150 "regulation of smooth
            muscle cell differentiation" evidence=IGI;IMP] [GO:0060425 "lung
            morphogenesis" evidence=IMP] [GO:0060426 "lung vasculature
            development" evidence=ISO] [GO:0060438 "trachea development"
            evidence=IMP] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IMP] [GO:0060446 "branching involved
            in open tracheal system development" evidence=ISO] [GO:0060461
            "right lung morphogenesis" evidence=IMP] [GO:0060463 "lung lobe
            morphogenesis" evidence=IMP] [GO:0060841 "venous blood vessel
            development" evidence=ISO] [GO:0061030 "epithelial cell
            differentiation involved in mammary gland alveolus development"
            evidence=IGI] [GO:0071345 "cellular response to cytokine stimulus"
            evidence=IDA] [GO:0071407 "cellular response to organic cyclic
            compound" evidence=IMP] [GO:0072001 "renal system development"
            evidence=ISO] [GO:0072189 "ureter development" evidence=ISO]
            [GO:0090131 "mesenchyme migration" evidence=IMP] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1347470
            GO:GO:0050728 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
            GO:GO:0030198 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0007494 GO:GO:0000122 GO:GO:0008301
            GO:GO:0001756 GO:GO:0044212 GO:GO:0048286 GO:GO:0003690
            GO:GO:0016337 GO:GO:0060841 GO:GO:0007368 GO:GO:0051145
            GO:GO:0003197 GO:GO:0030335 GO:GO:0048566 GO:GO:0001570
            GO:GO:0010811 GO:GO:0008134 GO:GO:0031016 GO:GO:0071407
            GO:GO:0060438 GO:GO:0007224 GO:GO:0051090 GO:GO:0048617
            GO:GO:0002053 GO:GO:0051150 GO:GO:0060441 GO:GO:0045198
            GO:GO:0003214 GO:GO:0060446 GO:GO:0071345 GO:GO:0043305
            eggNOG:COG5025 GO:GO:0060426 GeneTree:ENSGT00690000101636
            GO:GO:0060463 GO:GO:0061030 CTD:2294 HOGENOM:HOG000060124 KO:K09399
            OrthoDB:EOG4BRWM4 HOVERGEN:HBG051644 GO:GO:0014822 GO:GO:0048613
            GO:GO:0048371 GO:GO:0090131 GO:GO:0060461 GO:GO:0072189 EMBL:L35949
            EMBL:AF346834 EMBL:BC138805 EMBL:BC138806 EMBL:U42556
            IPI:IPI00117086 PIR:I49735 RefSeq:NP_034556.2 UniGene:Mm.33897
            UniGene:Mm.390071 ProteinModelPortal:Q61080 SMR:Q61080
            STRING:Q61080 PhosphoSite:Q61080 Ensembl:ENSMUST00000050684
            GeneID:15227 KEGG:mmu:15227 UCSC:uc009nrn.1 InParanoid:B2RSC1
            NextBio:287815 Bgee:Q61080 CleanEx:MM_FOXF1A Genevestigator:Q61080
            GermOnline:ENSMUSG00000042812 Uniprot:Q61080
        Length = 378

 Score = 239 (89.2 bits), Expect = 5.6e-20, P = 5.6e-20
 Identities = 52/135 (38%), Positives = 77/135 (57%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P  R+TL+EIYQF+   FP++R A  GWKNS+RHNLSLN+CF K+ +
Sbjct:    52 SYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPK 111

Query:    75 PKDDPGKGSYWAID--YNHTADDGPSKKKV-----KLPRVSP-YSPVECXXXXXXXDVHN 126
                 PGKG YW ID       ++G  +++      K   + P YS V         D + 
Sbjct:   112 GLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPVYSMVNGLGFNHLPDTYG 171

Query:   127 SKPPTSISSVPNTVS 141
              +    +S  PN+++
Sbjct:   172 FQGSGGLSCAPNSLA 186


>RGD|1584229 [details] [associations]
            symbol:LOC687536 "similar to Forkhead box protein F1
            (Forkhead-related protein FKHL5) (Forkhead-related transcription
            factor 1) (FREAC-1) (Hepatocyte nuclear factor 3 forkhead homolog
            8) (HFH-8)" species:10116 "Rattus norvegicus" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            REFSEQ:XM_001079002 Ncbi:XP_001079002
        Length = 378

 Score = 239 (89.2 bits), Expect = 5.6e-20, P = 5.6e-20
 Identities = 52/135 (38%), Positives = 77/135 (57%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P  R+TL+EIYQF+   FP++R A  GWKNS+RHNLSLN+CF K+ +
Sbjct:    52 SYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPK 111

Query:    75 PKDDPGKGSYWAID--YNHTADDGPSKKKV-----KLPRVSP-YSPVECXXXXXXXDVHN 126
                 PGKG YW ID       ++G  +++      K   + P YS V         D + 
Sbjct:   112 GLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPVYSMVNGLGFNHLPDTYG 171

Query:   127 SKPPTSISSVPNTVS 141
              +    +S  PN+++
Sbjct:   172 FQGSGGLSCAPNSLA 186


>UNIPROTKB|P33205 [details] [associations]
            symbol:foxa4-a "Forkhead box protein A4-A" species:8355
            "Xenopus laevis" [GO:0001707 "mesoderm formation" evidence=IMP]
            [GO:0001840 "neural plate development" evidence=IMP] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0005634 "nucleus" evidence=IC;NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0009948 "anterior/posterior axis specification" evidence=IMP]
            [GO:0030900 "forebrain development" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0045892 GO:GO:0030154 GO:GO:0043565 GO:GO:0030900
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0001707 GO:GO:0009948 GO:GO:0001840 InterPro:IPR018533
            Pfam:PF09354 HOVERGEN:HBG006621 EMBL:X65171 EMBL:U65751
            EMBL:BC082358 PIR:S35719 RefSeq:NP_001080963.1 UniGene:Xl.441
            ProteinModelPortal:P33205 SMR:P33205 GeneID:394304 KEGG:xla:394304
            CTD:394304 Xenbase:XB-GENE-865612 Uniprot:P33205
        Length = 399

 Score = 240 (89.5 bits), Expect = 6.0e-20, P = 6.0e-20
 Identities = 47/86 (54%), Positives = 56/86 (65%)

Query:     4 TYKTG--NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             TY+    + K   SY SLI +AI  AP   MTLNEIYQ+I   FPYYR+    W+NSIRH
Sbjct:   110 TYRRNYSHAKPPYSYISLITMAIQQAPNKMMTLNEIYQWIIDLFPYYRQNQQRWQNSIRH 169

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAI 87
             +LS N CF KV R  + PGKGSYW +
Sbjct:   170 SLSFNDCFVKVPRSPEKPGKGSYWTL 195


>UNIPROTKB|Q6P839 [details] [associations]
            symbol:foxa4 "Forkhead box protein A4" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010817
            "regulation of hormone levels" evidence=IBA] [GO:0019904 "protein
            domain specific binding" evidence=IBA] [GO:0042593 "glucose
            homeostasis" evidence=IBA] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISS] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IBA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048665 "neuron fate specification" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IBA] [GO:0060487 "lung epithelial cell differentiation"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0019904 GO:GO:0045892 GO:GO:0043565 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0045666 GO:GO:0008134 GO:GO:0007389 GO:GO:0060487
            GO:GO:0048665 GO:GO:0051090 GO:GO:0010817 GO:GO:0060441
            eggNOG:COG5025 HSSP:Q99958 InterPro:IPR018533 Pfam:PF09354
            HOGENOM:HOG000231817 HOVERGEN:HBG006621 OrthoDB:EOG43R3NB
            EMBL:CR762190 EMBL:BC061392 RefSeq:NP_988938.1 UniGene:Str.6030
            ProteinModelPortal:Q6P839 SMR:Q6P839 STRING:Q6P839 GeneID:394535
            KEGG:xtr:394535 CTD:394535 Xenbase:XB-GENE-486455 InParanoid:Q6P839
            Bgee:Q6P839 Uniprot:Q6P839
        Length = 399

 Score = 240 (89.5 bits), Expect = 6.0e-20, P = 6.0e-20
 Identities = 47/86 (54%), Positives = 56/86 (65%)

Query:     4 TYKTG--NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             TY+    + K   SY SLI +AI  AP   MTLNEIYQ+I   FPYYR+    W+NSIRH
Sbjct:   110 TYRRNYSHAKPPYSYISLITMAIQQAPNKMMTLNEIYQWIIDLFPYYRQNQQRWQNSIRH 169

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAI 87
             +LS N CF KV R  + PGKGSYW +
Sbjct:   170 SLSFNDCFVKVPRSPEKPGKGSYWTL 195


>UNIPROTKB|P33206 [details] [associations]
            symbol:foxa4-b "Forkhead box protein A4-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045892 GO:GO:0007399 GO:GO:0030154
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 InterPro:IPR018533 Pfam:PF09354 HOVERGEN:HBG006621
            EMBL:S93559 EMBL:U65750 EMBL:BC082641 PIR:A42237
            RefSeq:NP_001081076.1 UniGene:Xl.1082 ProteinModelPortal:P33206
            SMR:P33206 GeneID:394368 KEGG:xla:394368 CTD:394368
            Xenbase:XB-GENE-6254437 Uniprot:P33206
        Length = 400

 Score = 240 (89.5 bits), Expect = 6.1e-20, P = 6.1e-20
 Identities = 47/86 (54%), Positives = 56/86 (65%)

Query:     4 TYKTG--NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRH 61
             TY+    + K   SY SLI +AI  AP   MTLNEIYQ+I   FPYYR+    W+NSIRH
Sbjct:   110 TYRRNYSHAKPPYSYISLITMAIQQAPNKMMTLNEIYQWIVDLFPYYRQNQQRWQNSIRH 169

Query:    62 NLSLNKCFTKVARPKDDPGKGSYWAI 87
             +LS N CF KV R  + PGKGSYW +
Sbjct:   170 SLSFNDCFIKVPRSPEKPGKGSYWTL 195


>UNIPROTKB|Q5M7L9 [details] [associations]
            symbol:foxd3 "Forkhead box protein D3" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001658 "branching involved in
            ureteric bud morphogenesis" evidence=IBA] [GO:0001755 "neural crest
            cell migration" evidence=IBA] [GO:0001822 "kidney development"
            evidence=IBA] [GO:0003677 "DNA binding" evidence=ISS] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007422 "peripheral
            nervous system development" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0014034 "neural crest cell fate commitment"
            evidence=ISS] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048484 "enteric nervous system development" evidence=IBA]
            [GO:0048485 "sympathetic nervous system development" evidence=IBA]
            [GO:0048846 "axon extension involved in axon guidance"
            evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0050768 "negative regulation of
            neurogenesis" evidence=ISS] [GO:0050769 "positive regulation of
            neurogenesis" evidence=ISS] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0045892 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0001822 GO:GO:0050769
            GO:GO:0003690 GO:GO:0051216 GO:GO:0008134 GO:GO:0007389
            GO:GO:0001658 GO:GO:0048485 GO:GO:0030318 GO:GO:0050768
            GO:GO:0048484 GO:GO:0051090 GO:GO:0048846 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 KO:K09397 GO:GO:0048937 HSSP:Q63245
            GO:GO:0014034 HOVERGEN:HBG051641 OrthoDB:EOG45MN6S GO:GO:0050935
            HOGENOM:HOG000231285 CTD:27022 EMBL:CR760163 EMBL:BC088566
            RefSeq:NP_001011383.1 UniGene:Str.11302 ProteinModelPortal:Q5M7L9
            SMR:Q5M7L9 STRING:Q5M7L9 Ensembl:ENSXETT00000023699 GeneID:496851
            KEGG:xtr:496851 Xenbase:XB-GENE-487289 InParanoid:Q5M7L9
            OMA:SSMISGH Bgee:Q5M7L9 Uniprot:Q5M7L9
        Length = 369

 Score = 238 (88.8 bits), Expect = 6.1e-20, P = 6.1e-20
 Identities = 43/83 (51%), Positives = 58/83 (69%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K   +K   SY +LI +AI  +PQ ++TL+ I +FI++ FPYYRE    W+NSIRHNLSL
Sbjct:    87 KNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSL 146

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             N CF K+ R   +PGKG+YW +D
Sbjct:   147 NDCFVKIPREPGNPGKGNYWTLD 169


>UNIPROTKB|G3MX55 [details] [associations]
            symbol:G3MX55 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104135
            OMA:CEIMSSE EMBL:DAAA02008974 EMBL:DAAA02008975
            Ensembl:ENSBTAT00000063136 Uniprot:G3MX55
        Length = 424

 Score = 241 (89.9 bits), Expect = 6.2e-20, P = 6.2e-20
 Identities = 48/105 (45%), Positives = 66/105 (62%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI  +P+ R+TL+EI +FI+  FPYYRE    W+NSIRHNLSLN CF
Sbjct:    99 VKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCF 158

Query:    70 TKVARPKDDPGKGSYWAIDYNHTA--DDGPSKKKVKLPRVSPYSP 112
              K+ R   +PGKG+YW +D       D+G   ++ K  +  P  P
Sbjct:   159 VKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPP 203


>UNIPROTKB|J9P9K1 [details] [associations]
            symbol:FOXD3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 EMBL:AAEX03003765 EMBL:AAEX03003766
            Ensembl:ENSCAFT00000048793 Uniprot:J9P9K1
        Length = 370

 Score = 238 (88.8 bits), Expect = 6.3e-20, P = 6.3e-20
 Identities = 43/83 (51%), Positives = 58/83 (69%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K   +K   SY +LI +AI  +PQ ++TL+ I +FI++ FPYYRE    W+NSIRHNLSL
Sbjct:   120 KNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSL 179

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             N CF K+ R   +PGKG+YW +D
Sbjct:   180 NDCFVKIPREPGNPGKGNYWTLD 202


>UNIPROTKB|J9NRI9 [details] [associations]
            symbol:FOXK1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR000253
            InterPro:IPR001766 InterPro:IPR008984 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039 SMART:SM00240
            SMART:SM00339 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 SUPFAM:SSF49879 GeneTree:ENSGT00700000104094
            EMBL:AAEX03004309 EMBL:AAEX03004310 Ensembl:ENSCAFT00000044839
            Uniprot:J9NRI9
        Length = 601

 Score = 232 (86.7 bits), Expect = 6.7e-20, Sum P(2) = 6.7e-20
 Identities = 44/74 (59%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AIS+A   ++TL+ IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   182 SYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 241

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   242 SQEEPGKGSFWRID 255

 Score = 36 (17.7 bits), Expect = 6.7e-20, Sum P(2) = 6.7e-20
 Identities = 11/48 (22%), Positives = 19/48 (39%)

Query:    90 NHTADDGPSKKKVKLPRVSPYSPVECXXXXXXXDVHNSKPPTSISSVP 137
             + +A   P+   +  PR S     EC         H+    + ++SVP
Sbjct:   287 SRSAPASPTHPGLMSPRSSGLQTPECLSREGSPIPHDPDFGSKLASVP 334


>RGD|621715 [details] [associations]
            symbol:Foxd3 "forkhead box D3" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;ISS] [GO:0000790 "nuclear
            chromatin" evidence=ISO] [GO:0000977 "RNA polymerase II regulatory
            region sequence-specific DNA binding" evidence=ISO] [GO:0001227
            "RNA polymerase II transcription regulatory region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=ISO]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=IBA] [GO:0001701 "in utero embryonic development"
            evidence=ISO;ISS] [GO:0001755 "neural crest cell migration"
            evidence=IBA] [GO:0001822 "kidney development" evidence=IBA]
            [GO:0001829 "trophectodermal cell differentiation"
            evidence=ISO;IBA] [GO:0001892 "embryonic placenta development"
            evidence=ISO;IBA] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0003690 "double-stranded DNA binding" evidence=IMP] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISO;ISS] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA;ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;ISS;IBA] [GO:0048484 "enteric
            nervous system development" evidence=IBA] [GO:0048485 "sympathetic
            nervous system development" evidence=IBA] [GO:0048846 "axon
            extension involved in axon guidance" evidence=IBA] [GO:0048937
            "lateral line nerve glial cell development" evidence=IBA]
            [GO:0050935 "iridophore differentiation" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0051216 "cartilage development"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 RGD:621715 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
            GO:GO:0001822 GO:GO:0003690 GO:GO:0051216 GO:GO:0001829
            GO:GO:0008134 GO:GO:0007389 GO:GO:0001658 GO:GO:0048485
            GO:GO:0030318 GO:GO:0001892 GO:GO:0048484 GO:GO:0051090
            GO:GO:0048846 eggNOG:COG5025 GO:GO:0048937 GO:GO:0050935
            HOGENOM:HOG000231285 EMBL:L13202 IPI:IPI00765696 PIR:I60917
            UniGene:Rn.92964 PDB:2HDC PDB:2HFH PDBsum:2HDC PDBsum:2HFH
            ProteinModelPortal:Q63245 SMR:Q63245 STRING:Q63245
            PhosphoSite:Q63245 UCSC:RGD:621715 HOVERGEN:HBG083674
            InParanoid:Q63245 EvolutionaryTrace:Q63245 ArrayExpress:Q63245
            Genevestigator:Q63245 GermOnline:ENSRNOG00000009021 Uniprot:Q63245
        Length = 101

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 42/79 (53%), Positives = 57/79 (72%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI  +PQ ++TL+ I +FI++ FPYYRE    W+NSIRHNLSLN CF
Sbjct:     2 VKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCF 61

Query:    70 TKVARPKDDPGKGSYWAID 88
              K+ R   +PGKG+YW +D
Sbjct:    62 VKIPREPGNPGKGNYWTLD 80


>UNIPROTKB|F1M2L0 [details] [associations]
            symbol:F1M2L0 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 IPI:IPI00192291
            Ensembl:ENSRNOT00000023980 Uniprot:F1M2L0
        Length = 351

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 42/74 (56%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P  R+TL+EIYQF+   FP++R A  GWKNS+RHNLSLN+CF K+ +
Sbjct:    27 SYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPK 86

Query:    75 PKDDPGKGSYWAID 88
                 PGKG YW ID
Sbjct:    87 GLGRPGKGHYWTID 100


>UNIPROTKB|Q63245 [details] [associations]
            symbol:Foxd3 "Forkhead box protein D3" species:10116
            "Rattus norvegicus" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 RGD:621715 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
            GO:GO:0001822 GO:GO:0003690 GO:GO:0051216 GO:GO:0001829
            GO:GO:0008134 GO:GO:0007389 GO:GO:0001658 GO:GO:0048485
            GO:GO:0030318 GO:GO:0001892 GO:GO:0048484 GO:GO:0051090
            GO:GO:0048846 eggNOG:COG5025 GO:GO:0048937 GO:GO:0050935
            HOGENOM:HOG000231285 EMBL:L13202 IPI:IPI00765696 PIR:I60917
            UniGene:Rn.92964 PDB:2HDC PDB:2HFH PDBsum:2HDC PDBsum:2HFH
            ProteinModelPortal:Q63245 SMR:Q63245 STRING:Q63245
            PhosphoSite:Q63245 UCSC:RGD:621715 HOVERGEN:HBG083674
            InParanoid:Q63245 EvolutionaryTrace:Q63245 ArrayExpress:Q63245
            Genevestigator:Q63245 GermOnline:ENSRNOG00000009021 Uniprot:Q63245
        Length = 101

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 42/79 (53%), Positives = 57/79 (72%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI  +PQ ++TL+ I +FI++ FPYYRE    W+NSIRHNLSLN CF
Sbjct:     2 VKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCF 61

Query:    70 TKVARPKDDPGKGSYWAID 88
              K+ R   +PGKG+YW +D
Sbjct:    62 VKIPREPGNPGKGNYWTLD 80


>UNIPROTKB|Q95QA9 [details] [associations]
            symbol:fkh-2 "Protein FKH-2, isoform b" species:6239
            "Caenorhabditis elegans" [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0045787 "positive regulation of cell cycle"
            evidence=IBA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IBA] [GO:0016199 "axon midline choice
            point recognition" evidence=IBA] [GO:0009953 "dorsal/ventral
            pattern formation" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0009880 "embryonic pattern specification"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0007346 "regulation of mitotic cell cycle" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0002052
            "positive regulation of neuroblast proliferation" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0009792
            GO:GO:0007346 GO:GO:0002119 GO:GO:0043565 GO:GO:0045944
            GO:GO:0016199 GO:GO:0016358 GO:GO:0045665 GO:GO:0040017
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0009953 GO:GO:0008134
            GO:GO:0009880 GO:GO:0048665 GO:GO:0045787 GO:GO:0002052
            GO:GO:0051090 GO:GO:0035058 GO:GO:0009888 HSSP:Q99958 KO:K09385
            GeneTree:ENSGT00700000104051 EMBL:FO080253 GeneID:180663
            KEGG:cel:CELE_T14G12.4 UCSC:T14G12.4a CTD:180663 NextBio:910344
            RefSeq:NP_508645.1 ProteinModelPortal:Q95QA9 SMR:Q95QA9
            STRING:Q95QA9 EnsemblMetazoa:T14G12.4b.1 EnsemblMetazoa:T14G12.4b.2
            WormBase:T14G12.4b ArrayExpress:Q95QA9 Uniprot:Q95QA9
        Length = 168

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 42/74 (56%), Positives = 56/74 (75%)

Query:    22 LAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVARPKDDPGK 81
             +AI ++P+ R+TL  IY++I   +P+YR+   GW+NSIRHNLSLNKCF KV R  DDPGK
Sbjct:     2 MAIKDSPEKRLTLAGIYEYIVTNYPFYRDNKQGWQNSIRHNLSLNKCFVKVPRNFDDPGK 61

Query:    82 GSYWAIDYNHTADD 95
             G+YW +D   TA+D
Sbjct:    62 GNYWMLDA--TAED 73


>UNIPROTKB|Q98937 [details] [associations]
            symbol:FOXD1 "Forkhead box protein D1" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0007422 "peripheral nervous system development" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0030318 "melanocyte
            differentiation" evidence=IBA] [GO:0030513 "positive regulation of
            BMP signaling pathway" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048484 "enteric nervous system development"
            evidence=IBA] [GO:0048485 "sympathetic nervous system development"
            evidence=IBA] [GO:0048846 "axon extension involved in axon
            guidance" evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0060678 "dichotomous
            subdivision of terminal units involved in ureteric bud branching"
            evidence=IBA] [GO:0090184 "positive regulation of kidney
            development" evidence=IBA] [GO:0001755 "neural crest cell
            migration" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0030513 GO:GO:0051216 GO:GO:0008134 GO:GO:0007389
            GO:GO:0048485 GO:GO:0030318 GO:GO:0048484 GO:GO:0051090
            GO:GO:0090184 GO:GO:0048846 eggNOG:COG5025 KO:K09397 GO:GO:0048937
            EMBL:U47276 IPI:IPI00590831 PIR:S71795 RefSeq:NP_990523.1
            UniGene:Gga.253 UniGene:Gga.51521 ProteinModelPortal:Q98937
            SMR:Q98937 STRING:Q98937 GeneID:396109 KEGG:gga:396109 CTD:2297
            HOVERGEN:HBG051641 InParanoid:Q98937 OrthoDB:EOG45MN6S
            NextBio:20816167 GO:GO:0060678 GO:GO:0050935 Uniprot:Q98937
        Length = 440

 Score = 241 (89.9 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 44/83 (53%), Positives = 58/83 (69%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K   +K   SY +LI +AI  +P+ R+TL+EI +FI+  FPYYRE    W+NSIRHNLSL
Sbjct:   138 KNSLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSL 197

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             N CF K+ R   +PGKG+YW +D
Sbjct:   198 NDCFVKIPREPGNPGKGNYWTLD 220


>UNIPROTKB|P79772 [details] [associations]
            symbol:FOXD3 "Forkhead box protein D3" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0043009 "chordate embryonic development" evidence=IDA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS;IBA] [GO:0001658
            "branching involved in ureteric bud morphogenesis" evidence=IBA]
            [GO:0001755 "neural crest cell migration" evidence=IBA] [GO:0001822
            "kidney development" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0048484
            "enteric nervous system development" evidence=IBA] [GO:0048485
            "sympathetic nervous system development" evidence=IBA] [GO:0048846
            "axon extension involved in axon guidance" evidence=IBA]
            [GO:0048937 "lateral line nerve glial cell development"
            evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0001829 "trophectodermal
            cell differentiation" evidence=IEA] [GO:0001892 "embryonic placenta
            development" evidence=IEA] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0001755
            GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
            GO:GO:0008301 GO:GO:0044212 GO:GO:0001822 GO:GO:0003690
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0001658
            GO:GO:0048485 GO:GO:0030318 GO:GO:0048484 GO:GO:0051090
            GO:GO:0043009 GO:GO:0048846 KO:K09397 GO:GO:0048937
            HOVERGEN:HBG051641 GO:GO:0050935 EMBL:U37274 IPI:IPI00582465
            RefSeq:NP_990282.1 UniGene:Gga.468 ProteinModelPortal:P79772
            SMR:P79772 STRING:P79772 GeneID:395794 KEGG:gga:395794 CTD:27022
            InParanoid:P79772 NextBio:20815862 Uniprot:P79772
        Length = 394

 Score = 239 (89.2 bits), Expect = 7.3e-20, P = 7.3e-20
 Identities = 43/83 (51%), Positives = 59/83 (71%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K+  +K   SY +LI +AI  +PQ ++TL+ I +FI++ FPYYRE    W+NSIRHNLSL
Sbjct:   112 KSSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSL 171

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             N CF K+ R   +PGKG+YW +D
Sbjct:   172 NDCFVKIPREPGNPGKGNYWTLD 194


>UNIPROTKB|F1RI50 [details] [associations]
            symbol:FOXK1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0030308 "negative
            regulation of cell growth" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339 GO:GO:0045892
            GO:GO:0045893 GO:GO:0005730 GO:GO:0030308 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GeneTree:ENSGT00700000104094
            OMA:CEVGPKE EMBL:CU928310 Ensembl:ENSSSCT00000008315 Uniprot:F1RI50
        Length = 625

 Score = 232 (86.7 bits), Expect = 7.8e-20, Sum P(2) = 7.8e-20
 Identities = 44/74 (59%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AIS+A   ++TL+ IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   195 SYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 254

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   255 SQEEPGKGSFWRID 268

 Score = 36 (17.7 bits), Expect = 7.8e-20, Sum P(2) = 7.8e-20
 Identities = 11/48 (22%), Positives = 19/48 (39%)

Query:    90 NHTADDGPSKKKVKLPRVSPYSPVECXXXXXXXDVHNSKPPTSISSVP 137
             + +A   P+   +  PR S     EC         H+    + ++SVP
Sbjct:   299 SRSAPASPTHPGLMSPRSSGLQTPECLSREGSPIPHDPDFGSKLASVP 346


>UNIPROTKB|Q6LD29 [details] [associations]
            symbol:foxa1-a "Forkhead box protein A1-A" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 HSSP:Q99958
            InterPro:IPR018533 Pfam:PF09354 HOVERGEN:HBG006621 EMBL:U04873
            ProteinModelPortal:Q6LD29 SMR:Q6LD29 Uniprot:Q6LD29
        Length = 429

 Score = 240 (89.5 bits), Expect = 8.4e-20, P = 8.4e-20
 Identities = 44/73 (60%), Positives = 52/73 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYR+    W+NSIRH+LS N CF KVAR
Sbjct:   163 SYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVAR 222

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYW +
Sbjct:   223 SPDKPGKGSYWTL 235


>UNIPROTKB|J9P4F9 [details] [associations]
            symbol:FOXK2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104094 Ensembl:ENSCAFT00000044110
            Uniprot:J9P4F9
        Length = 471

 Score = 241 (89.9 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 45/74 (60%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AI+ AP  ++TLN IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:    73 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 132

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   133 SQEEPGKGSFWRID 146


>UNIPROTKB|Q9PSY4 [details] [associations]
            symbol:foxd1 "Forkhead box protein D1" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA;IMP] [GO:0001755
            "neural crest cell migration" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0007398 "ectoderm development" evidence=IMP]
            [GO:0007399 "nervous system development" evidence=IMP] [GO:0007498
            "mesoderm development" evidence=IMP] [GO:0030336 "negative
            regulation of cell migration" evidence=IMP] [GO:0030900 "forebrain
            development" evidence=IMP] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0007498 GO:GO:0001755 GO:GO:0043565 GO:GO:0030900
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0000122 GO:GO:0030336 GO:GO:0007398 KO:K09397 HSSP:Q63245
            CTD:2297 HOVERGEN:HBG051641 EMBL:AF072889 EMBL:AJ011652
            EMBL:BC108577 RefSeq:NP_001079052.1 UniGene:Xl.66
            ProteinModelPortal:Q9PSY4 SMR:Q9PSY4 GeneID:373583 KEGG:xla:373583
            Xenbase:XB-GENE-865762 Uniprot:Q9PSY4
        Length = 345

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 42/79 (53%), Positives = 56/79 (70%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI ++I  +P+ R+TL+EI  FI+  FPYYRE    W+NSIRHNLSLN CF
Sbjct:    67 VKPPYSYIALITMSILQSPKKRLTLSEICDFISSRFPYYREKFPAWQNSIRHNLSLNDCF 126

Query:    70 TKVARPKDDPGKGSYWAID 88
              K+ R   +PGKG+YW +D
Sbjct:   127 VKIPREPGNPGKGNYWTLD 145


>UNIPROTKB|B7ZAP5 [details] [associations]
            symbol:FOXA1 "Hepatocyte nuclear factor 3-alpha"
            species:9606 "Homo sapiens" [GO:0008134 "transcription factor
            binding" evidence=IEA] [GO:0019904 "protein domain specific
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0042445 "hormone metabolic process" evidence=IEA] [GO:0042593
            "glucose homeostasis" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048665 "neuron fate specification" evidence=IEA]
            [GO:0060441 "epithelial tube branching involved in lung
            morphogenesis" evidence=IEA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IEA] [GO:0060528 "secretory columnal
            luminar epithelial cell differentiation involved in prostate
            glandular acinus development" evidence=IEA] [GO:0060738
            "epithelial-mesenchymal signaling involved in prostate gland
            development" evidence=IEA] [GO:0060740 "prostate gland epithelium
            morphogenesis" evidence=IEA] [GO:0060741 "prostate gland stromal
            morphogenesis" evidence=IEA] [GO:0060743 "epithelial cell
            maturation involved in prostate gland development" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0042593 GO:GO:0006338
            GO:GO:0003690 GO:GO:0045666 GO:GO:0042445 GO:GO:0060740
            GO:GO:0060487 GO:GO:0048665 GO:GO:0060441 GO:GO:0060741
            GO:GO:0060743 InterPro:IPR018533 Pfam:PF09354 EMBL:AL121790
            HGNC:HGNC:5021 HOVERGEN:HBG006621 ChiTaRS:FOXA1 GO:GO:0060738
            GO:GO:0060528 EMBL:AK316360 IPI:IPI00024387 SMR:B7ZAP5
            STRING:B7ZAP5 Ensembl:ENST00000540786 Uniprot:B7ZAP5
        Length = 439

 Score = 240 (89.5 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 44/73 (60%), Positives = 52/73 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYR+    W+NSIRH+LS N CF KVAR
Sbjct:   141 SYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVAR 200

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYW +
Sbjct:   201 SPDKPGKGSYWTL 213


>UNIPROTKB|Q9PTK2 [details] [associations]
            symbol:foxe4 "Forkhead box protein E4" species:8355
            "Xenopus laevis" [GO:0002088 "lens development in camera-type eye"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0002088
            HSSP:Q63245 HOVERGEN:HBG051642 KO:K09398 CTD:2301 EMBL:AF186464
            RefSeq:NP_001079202.1 UniGene:Xl.593 ProteinModelPortal:Q9PTK2
            SMR:Q9PTK2 GeneID:373809 KEGG:xla:373809 Xenbase:XB-GENE-865391
            Uniprot:Q9PTK2
        Length = 365

 Score = 236 (88.1 bits), Expect = 9.8e-20, P = 9.8e-20
 Identities = 40/74 (54%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI+N+P+ ++TL  IY+FI   FP+YRE +  W+NSIRHNL+LN CF K+ R
Sbjct:    52 SYIALIAMAIANSPERKLTLGGIYKFIMERFPFYRENSKKWQNSIRHNLTLNDCFVKIPR 111

Query:    75 PKDDPGKGSYWAID 88
                 PGKG+YW +D
Sbjct:   112 EPGHPGKGNYWTLD 125


>UNIPROTKB|E2QSA5 [details] [associations]
            symbol:FOXA1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0060743 "epithelial cell maturation involved
            in prostate gland development" evidence=IEA] [GO:0060741 "prostate
            gland stromal morphogenesis" evidence=IEA] [GO:0060740 "prostate
            gland epithelium morphogenesis" evidence=IEA] [GO:0060738
            "epithelial-mesenchymal signaling involved in prostate gland
            development" evidence=IEA] [GO:0060528 "secretory columnal luminar
            epithelial cell differentiation involved in prostate glandular
            acinus development" evidence=IEA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045931 "positive regulation of mitotic cell cycle"
            evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042593 "glucose
            homeostasis" evidence=IEA] [GO:0042445 "hormone metabolic process"
            evidence=IEA] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=IEA] [GO:0032355
            "response to estradiol stimulus" evidence=IEA] [GO:0010719
            "negative regulation of epithelial to mesenchymal transition"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0051091 GO:GO:0032355 GO:GO:0045931 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0042593 GO:GO:0006338 GO:GO:0044212 GO:GO:0045666
            GO:GO:0042445 GO:GO:0033148 GO:GO:0060740 GO:GO:0060487
            GO:GO:0048665 GO:GO:0060441 GO:GO:0010719 GO:GO:0060741
            GO:GO:0060743 InterPro:IPR018533 Pfam:PF09354 GO:GO:0060738
            GO:GO:0060528 Ensembl:ENSCAFT00000021805 Uniprot:E2QSA5
        Length = 452

 Score = 240 (89.5 bits), Expect = 1.0e-19, P = 1.0e-19
 Identities = 44/73 (60%), Positives = 52/73 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYR+    W+NSIRH+LS N CF KVAR
Sbjct:   174 SYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVAR 233

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYW +
Sbjct:   234 SPDKPGKGSYWTL 246


>MGI|MGI:1347488 [details] [associations]
            symbol:Foxk1 "forkhead box K1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0000287 "magnesium ion
            binding" evidence=IBA] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IC] [GO:0005667 "transcription
            factor complex" evidence=IBA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
            of transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0007517 "muscle organ development" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0030154 "cell differentiation" evidence=IEA] [GO:0030308
            "negative regulation of cell growth" evidence=IDA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045786 "negative
            regulation of cell cycle" evidence=TAS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR000253 InterPro:IPR001766 InterPro:IPR008984
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039
            SMART:SM00240 SMART:SM00339 MGI:MGI:1347488 GO:GO:0045892
            GO:GO:0045893 GO:GO:0030154 GO:GO:0005730 GO:GO:0030308
            GO:GO:0000287 GO:GO:0003677 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0009790
            GO:GO:0007517 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0045786 GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888
            GeneTree:ENSGT00700000104094 CTD:221937 HOGENOM:HOG000072588
            HOVERGEN:HBG051649 KO:K09404 OMA:CEVGPKE ChiTaRS:FOXK1 EMBL:L26507
            EMBL:AK144418 EMBL:AK147375 EMBL:U95016 IPI:IPI00656285 PIR:A56051
            RefSeq:NP_951031.2 UniGene:Mm.24214 PDB:2A3S PDB:2D2W PDBsum:2A3S
            PDBsum:2D2W ProteinModelPortal:P42128 SMR:P42128 IntAct:P42128
            STRING:P42128 PhosphoSite:P42128 PaxDb:P42128 PRIDE:P42128
            DNASU:17425 Ensembl:ENSMUST00000072837 GeneID:17425 KEGG:mmu:17425
            UCSC:uc009aio.1 InParanoid:P42128 EvolutionaryTrace:P42128
            NextBio:292048 Bgee:P42128 CleanEx:MM_FOXK1 Genevestigator:P42128
            GermOnline:ENSMUSG00000056493 Uniprot:P42128
        Length = 719

 Score = 232 (86.7 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
 Identities = 44/74 (59%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AIS+A   ++TL+ IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   295 SYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 354

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   355 SQEEPGKGSFWRID 368

 Score = 37 (18.1 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
 Identities = 11/48 (22%), Positives = 19/48 (39%)

Query:    90 NHTADDGPSKKKVKLPRVSPYSPVECXXXXXXXDVHNSKPPTSISSVP 137
             + +A   P+   +  PR S     EC         H+    + ++SVP
Sbjct:   400 SRSAPASPTHPGLMSPRSSGLQTPECLSREGSPIPHDPDLGSKLASVP 447


>RGD|1309643 [details] [associations]
            symbol:Foxk1 "forkhead box K1" species:10116 "Rattus norvegicus"
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
            "nucleolus" evidence=IEA;ISO] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA;ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IEA;ISO] InterPro:IPR000253
            InterPro:IPR001766 InterPro:IPR008984 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039 SMART:SM00240
            SMART:SM00339 RGD:1309643 GO:GO:0045892 GO:GO:0045893 GO:GO:0005730
            GO:GO:0030308 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006357 Gene3D:2.60.200.20 SUPFAM:SSF49879
            GeneTree:ENSGT00700000104094 CTD:221937 KO:K09404 OMA:CEVGPKE
            OrthoDB:EOG4RV2TP IPI:IPI00189970 RefSeq:NP_001032296.2
            UniGene:Rn.211697 PhosphoSite:D3ZU55 Ensembl:ENSRNOT00000001466
            GeneID:304298 KEGG:rno:304298 UCSC:RGD:1309643 NextBio:652822
            Uniprot:D3ZU55
        Length = 719

 Score = 232 (86.7 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
 Identities = 44/74 (59%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AIS+A   ++TL+ IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   295 SYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 354

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   355 SQEEPGKGSFWRID 368

 Score = 37 (18.1 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
 Identities = 11/48 (22%), Positives = 19/48 (39%)

Query:    90 NHTADDGPSKKKVKLPRVSPYSPVECXXXXXXXDVHNSKPPTSISSVP 137
             + +A   P+   +  PR S     EC         H+    + ++SVP
Sbjct:   400 SRSAPASPTHPGLMSPRSSGLQTPECLSREGSPIPHDPDLGSKLASVP 447


>UNIPROTKB|F1Q2J8 [details] [associations]
            symbol:FOXK1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR000253
            InterPro:IPR001766 InterPro:IPR008984 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039 SMART:SM00240
            SMART:SM00339 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 Gene3D:2.60.200.20 SUPFAM:SSF49879
            GeneTree:ENSGT00700000104094 EMBL:AAEX03004309 EMBL:AAEX03004310
            Ensembl:ENSCAFT00000025556 Uniprot:F1Q2J8
        Length = 674

 Score = 232 (86.7 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
 Identities = 44/74 (59%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AIS+A   ++TL+ IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   255 SYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 314

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   315 SQEEPGKGSFWRID 328

 Score = 36 (17.7 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
 Identities = 11/48 (22%), Positives = 19/48 (39%)

Query:    90 NHTADDGPSKKKVKLPRVSPYSPVECXXXXXXXDVHNSKPPTSISSVP 137
             + +A   P+   +  PR S     EC         H+    + ++SVP
Sbjct:   360 SRSAPASPTHPGLMSPRSSGLQTPECLSREGSPIPHDPDFGSKLASVP 407


>MGI|MGI:1347471 [details] [associations]
            symbol:Foxd2 "forkhead box D2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001755 "neural crest
            cell migration" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0007422 "peripheral nervous system
            development" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0030513
            "positive regulation of BMP signaling pathway" evidence=IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0048484 "enteric nervous
            system development" evidence=IBA] [GO:0048485 "sympathetic nervous
            system development" evidence=IBA] [GO:0048846 "axon extension
            involved in axon guidance" evidence=IBA] [GO:0048937 "lateral line
            nerve glial cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IBA] [GO:0090184 "positive
            regulation of kidney development" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1347471
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0030513 GO:GO:0051216 GO:GO:0008134 GO:GO:0007389
            GO:GO:0048485 GO:GO:0030318 GO:GO:0048484 GO:GO:0051090
            GO:GO:0090184 GO:GO:0048846 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 KO:K09397 GO:GO:0048937 GO:GO:0060678
            GO:GO:0050935 HOGENOM:HOG000231285 CTD:2306 OMA:CEIMSSE
            EMBL:AF023915 EMBL:AL670035 IPI:IPI00130007 RefSeq:NP_032619.1
            UniGene:Mm.7997 ProteinModelPortal:O35392 SMR:O35392
            PhosphoSite:O35392 PRIDE:O35392 Ensembl:ENSMUST00000068654
            GeneID:17301 KEGG:mmu:17301 UCSC:uc012dix.1 InParanoid:A2AD43
            NextBio:291838 Bgee:O35392 CleanEx:MM_FOXD2 Genevestigator:O35392
            GermOnline:ENSMUSG00000055210 Uniprot:O35392
        Length = 492

 Score = 241 (89.9 bits), Expect = 1.1e-19, P = 1.1e-19
 Identities = 48/105 (45%), Positives = 66/105 (62%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI  +P+ R+TL+EI +FI+  FPYYRE    W+NSIRHNLSLN CF
Sbjct:   128 VKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCF 187

Query:    70 TKVARPKDDPGKGSYWAIDYNHTA--DDGPSKKKVKLPRVSPYSP 112
              K+ R   +PGKG+YW +D       D+G   ++ K  +  P  P
Sbjct:   188 VKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPP 232


>RGD|1304642 [details] [associations]
            symbol:Foxd2 "forkhead box D2" species:10116 "Rattus norvegicus"
            [GO:0001755 "neural crest cell migration" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007422 "peripheral
            nervous system development" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0030513 "positive regulation of BMP signaling
            pathway" evidence=IBA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0048484 "enteric
            nervous system development" evidence=IBA] [GO:0048485 "sympathetic
            nervous system development" evidence=IBA] [GO:0048846 "axon
            extension involved in axon guidance" evidence=IBA] [GO:0048937
            "lateral line nerve glial cell development" evidence=IBA]
            [GO:0050935 "iridophore differentiation" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0051216 "cartilage development"
            evidence=IBA] [GO:0060678 "dichotomous subdivision of terminal
            units involved in ureteric bud branching" evidence=IBA] [GO:0090184
            "positive regulation of kidney development" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            RGD:1304642 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 GeneTree:ENSGT00700000104135 GO:GO:0048937
            GO:GO:0060678 GO:GO:0050935 OMA:CEIMSSE IPI:IPI00358989
            Ensembl:ENSRNOT00000010201 NextBio:666291 ArrayExpress:F1LP85
            Uniprot:F1LP85
        Length = 494

 Score = 241 (89.9 bits), Expect = 1.1e-19, P = 1.1e-19
 Identities = 48/105 (45%), Positives = 66/105 (62%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI  +P+ R+TL+EI +FI+  FPYYRE    W+NSIRHNLSLN CF
Sbjct:   130 VKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCF 189

Query:    70 TKVARPKDDPGKGSYWAIDYNHTA--DDGPSKKKVKLPRVSPYSP 112
              K+ R   +PGKG+YW +D       D+G   ++ K  +  P  P
Sbjct:   190 VKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPP 234


>UNIPROTKB|O60548 [details] [associations]
            symbol:FOXD2 "Forkhead box protein D2" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0001755 "neural crest cell migration" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007422 "peripheral
            nervous system development" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0030513 "positive regulation of BMP signaling
            pathway" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048484 "enteric nervous system development" evidence=IBA]
            [GO:0048485 "sympathetic nervous system development" evidence=IBA]
            [GO:0048846 "axon extension involved in axon guidance"
            evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0060678 "dichotomous
            subdivision of terminal units involved in ureteric bud branching"
            evidence=IBA] [GO:0090184 "positive regulation of kidney
            development" evidence=IBA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=TAS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 eggNOG:COG5025 KO:K09397 GO:GO:0048937 GO:GO:0060678
            GO:GO:0050935 HOGENOM:HOG000231285 EMBL:AF042832 EMBL:AL607122
            IPI:IPI00030209 RefSeq:NP_004465.3 UniGene:Hs.166188
            ProteinModelPortal:O60548 SMR:O60548 STRING:O60548
            PhosphoSite:O60548 PaxDb:O60548 PRIDE:O60548
            Ensembl:ENST00000334793 GeneID:2306 KEGG:hsa:2306 UCSC:uc001crm.3
            CTD:2306 GeneCards:GC01P047901 HGNC:HGNC:3803 MIM:602211
            neXtProt:NX_O60548 PharmGKB:PA28220 InParanoid:O60548 OMA:CEIMSSE
            PhylomeDB:O60548 GenomeRNAi:2306 NextBio:9367 Bgee:O60548
            CleanEx:HS_FOXD2 Genevestigator:O60548 GermOnline:ENSG00000186564
            Uniprot:O60548
        Length = 495

 Score = 241 (89.9 bits), Expect = 1.1e-19, P = 1.1e-19
 Identities = 48/105 (45%), Positives = 66/105 (62%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI  +P+ R+TL+EI +FI+  FPYYRE    W+NSIRHNLSLN CF
Sbjct:   126 VKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCF 185

Query:    70 TKVARPKDDPGKGSYWAIDYNHTA--DDGPSKKKVKLPRVSPYSP 112
              K+ R   +PGKG+YW +D       D+G   ++ K  +  P  P
Sbjct:   186 VKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPP 230


>UNIPROTKB|J3KT45 [details] [associations]
            symbol:FOXD1 "Forkhead box protein D1" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 HGNC:HGNC:3802 ChiTaRS:FOXD1
            EMBL:AC099522 ProteinModelPortal:J3KT45 Ensembl:ENST00000499003
            Uniprot:J3KT45
        Length = 459

 Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
 Identities = 48/105 (45%), Positives = 66/105 (62%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI  +P+ R+TL+EI +FI+  FPYYRE    W+NSIRHNLSLN CF
Sbjct:   124 VKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCF 183

Query:    70 TKVARPKDDPGKGSYWAIDYNHTA--DDGPSKKKVKLPRVSPYSP 112
              K+ R   +PGKG+YW +D       D+G   ++ K  +  P  P
Sbjct:   184 VKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLLP 228


>UNIPROTKB|Q16676 [details] [associations]
            symbol:FOXD1 "Forkhead box protein D1" species:9606 "Homo
            sapiens" [GO:0001755 "neural crest cell migration" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007422 "peripheral
            nervous system development" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0009790 "embryo
            development" evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0030513 "positive regulation of BMP signaling
            pathway" evidence=ISS;IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048484 "enteric nervous system development" evidence=IBA]
            [GO:0048485 "sympathetic nervous system development" evidence=IBA]
            [GO:0048846 "axon extension involved in axon guidance"
            evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0060678 "dichotomous
            subdivision of terminal units involved in ureteric bud branching"
            evidence=ISS;IBA] [GO:0090184 "positive regulation of kidney
            development" evidence=ISS;IBA] [GO:0008301 "DNA binding, bending"
            evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IC] [GO:0010628
            "positive regulation of gene expression" evidence=ISS] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0072213 "metanephric capsule development" evidence=ISS]
            [GO:0072267 "metanephric capsule specification" evidence=ISS]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0045892 GO:GO:0001755 GO:GO:0043565
            GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0030513 GO:GO:0051216 GO:GO:0008134
            GO:GO:0048485 GO:GO:0030318 GO:GO:0048484 GO:GO:0051090
            GO:GO:0090184 GO:GO:0048846 eggNOG:COG5025 KO:K09397 GO:GO:0048937
            CTD:2297 HOVERGEN:HBG051641 GO:GO:0060678 GO:GO:0050935 EMBL:U59831
            EMBL:U59832 EMBL:U13222 IPI:IPI00003449 PIR:G02738 PIR:S51627
            RefSeq:NP_004463.1 UniGene:Hs.519385 ProteinModelPortal:Q16676
            SMR:Q16676 STRING:Q16676 PhosphoSite:Q16676 DMDM:2494490
            PaxDb:Q16676 PeptideAtlas:Q16676 PRIDE:Q16676 DNASU:2297
            GeneID:2297 KEGG:hsa:2297 UCSC:uc003kcp.3 GeneCards:GC05M072743
            HGNC:HGNC:3802 MIM:601091 neXtProt:NX_Q16676 PharmGKB:PA28219
            ChiTaRS:FOXD1 GenomeRNAi:2297 NextBio:9323 CleanEx:HS_FOXD1
            Genevestigator:Q16676 GO:GO:0072267 Uniprot:Q16676
        Length = 465

 Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
 Identities = 48/105 (45%), Positives = 66/105 (62%)

Query:    10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
             +K   SY +LI +AI  +P+ R+TL+EI +FI+  FPYYRE    W+NSIRHNLSLN CF
Sbjct:   124 VKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCF 183

Query:    70 TKVARPKDDPGKGSYWAIDYNHTA--DDGPSKKKVKLPRVSPYSP 112
              K+ R   +PGKG+YW +D       D+G   ++ K  +  P  P
Sbjct:   184 VKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLLP 228


>RGD|2807 [details] [associations]
            symbol:Foxa1 "forkhead box A1" species:10116 "Rattus norvegicus"
          [GO:0000122 "negative regulation of transcription from RNA polymerase
          II promoter" evidence=ISO;IGI] [GO:0001077 "RNA polymerase II core
          promoter proximal region sequence-specific DNA binding transcription
          factor activity involved in positive regulation of transcription"
          evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
          "double-stranded DNA binding" evidence=IDA] [GO:0003700
          "sequence-specific DNA binding transcription factor activity"
          evidence=IEA;ISO;IDA] [GO:0003705 "RNA polymerase II distal enhancer
          sequence-specific DNA binding transcription factor activity"
          evidence=IBA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
          "transcription factor complex" evidence=IBA] [GO:0006338 "chromatin
          remodeling" evidence=ISO] [GO:0007389 "pattern specification process"
          evidence=IBA] [GO:0008134 "transcription factor binding"
          evidence=IEA;IPI] [GO:0008301 "DNA binding, bending" evidence=IBA]
          [GO:0009790 "embryo development" evidence=IBA] [GO:0010468
          "regulation of gene expression" evidence=ISO] [GO:0010719 "negative
          regulation of epithelial to mesenchymal transition" evidence=ISO]
          [GO:0010817 "regulation of hormone levels" evidence=IBA] [GO:0016568
          "chromatin modification" evidence=IEA] [GO:0019904 "protein domain
          specific binding" evidence=IEA;IDA] [GO:0030324 "lung development"
          evidence=ISO] [GO:0032355 "response to estradiol stimulus"
          evidence=ISO] [GO:0033148 "positive regulation of intracellular
          estrogen receptor signaling pathway" evidence=ISO] [GO:0035239 "tube
          morphogenesis" evidence=ISO] [GO:0042445 "hormone metabolic process"
          evidence=ISO] [GO:0042593 "glucose homeostasis" evidence=ISO;IBA]
          [GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO;IDA]
          [GO:0044212 "transcription regulatory region DNA binding"
          evidence=ISO] [GO:0045666 "positive regulation of neuron
          differentiation" evidence=ISO;IBA] [GO:0045931 "positive regulation
          of mitotic cell cycle" evidence=ISO] [GO:0045944 "positive regulation
          of transcription from RNA polymerase II promoter" evidence=ISO;IDA]
          [GO:0048665 "neuron fate specification" evidence=ISO;IBA] [GO:0051090
          "regulation of sequence-specific DNA binding transcription factor
          activity" evidence=IBA] [GO:0051091 "positive regulation of
          sequence-specific DNA binding transcription factor activity"
          evidence=ISO] [GO:0060441 "epithelial tube branching involved in lung
          morphogenesis" evidence=ISO;IBA] [GO:0060487 "lung epithelial cell
          differentiation" evidence=ISO;IBA] [GO:0060528 "secretory columnal
          luminar epithelial cell differentiation involved in prostate
          glandular acinus development" evidence=ISO;IBA] [GO:0060738
          "epithelial-mesenchymal signaling involved in prostate gland
          development" evidence=ISO;IBA] [GO:0060740 "prostate gland epithelium
          morphogenesis" evidence=ISO;IBA] [GO:0060741 "prostate gland stromal
          morphogenesis" evidence=ISO;IBA] [GO:0060743 "epithelial cell
          maturation involved in prostate gland development" evidence=ISO;IBA]
          InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250
          Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
          PROSITE:PS50039 SMART:SM00339 RGD:2807 GO:GO:0019904 GO:GO:0043565
          Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593 GO:GO:0016568
          GO:GO:0005667 GO:GO:0003705 GO:GO:0001077 GO:GO:0000122 GO:GO:0008301
          GO:GO:0009790 GO:GO:0003690 GO:GO:0045666 GO:GO:0007389 GO:GO:0060740
          GO:GO:0060487 GO:GO:0048665 GO:GO:0051090 GO:GO:0010817 GO:GO:0060441
          GO:GO:0060741 eggNOG:COG5025 GO:GO:0060743 InterPro:IPR018533
          Pfam:PF09354 CTD:3169 HOGENOM:HOG000231817 HOVERGEN:HBG006621
          KO:K09387 GO:GO:0060738 GO:GO:0060528 EMBL:X55955 IPI:IPI00211811
          PIR:A36674 RefSeq:NP_036874.1 UniGene:Rn.10470
          ProteinModelPortal:P23512 SMR:P23512 STRING:P23512 PhosphoSite:P23512
          GeneID:25098 KEGG:rno:25098 UCSC:RGD:2807 NextBio:605405
          Genevestigator:P23512 GermOnline:ENSRNOG00000009284 Uniprot:P23512
        Length = 466

 Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
 Identities = 44/73 (60%), Positives = 52/73 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYR+    W+NSIRH+LS N CF KVAR
Sbjct:   174 SYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNACFVKVAR 233

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYW +
Sbjct:   234 SPDKPGKGSYWTL 246


>UNIPROTKB|F1MNS7 [details] [associations]
            symbol:FOXA1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0060743 "epithelial cell maturation involved in
            prostate gland development" evidence=IEA] [GO:0060741 "prostate
            gland stromal morphogenesis" evidence=IEA] [GO:0060740 "prostate
            gland epithelium morphogenesis" evidence=IEA] [GO:0060738
            "epithelial-mesenchymal signaling involved in prostate gland
            development" evidence=IEA] [GO:0060528 "secretory columnal luminar
            epithelial cell differentiation involved in prostate glandular
            acinus development" evidence=IEA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045931 "positive regulation of mitotic cell cycle"
            evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042593 "glucose
            homeostasis" evidence=IEA] [GO:0042445 "hormone metabolic process"
            evidence=IEA] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=IEA] [GO:0032355
            "response to estradiol stimulus" evidence=IEA] [GO:0010719
            "negative regulation of epithelial to mesenchymal transition"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0051091 GO:GO:0032355 GO:GO:0045931 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0042593 GO:GO:0006338 GO:GO:0044212 GO:GO:0045666
            GO:GO:0042445 GO:GO:0033148 GO:GO:0060740 GO:GO:0060487
            GO:GO:0048665 GO:GO:0060441 GO:GO:0010719 GO:GO:0060741
            GeneTree:ENSGT00700000104475 GO:GO:0060743 InterPro:IPR018533
            Pfam:PF09354 CTD:3169 KO:K09387 OMA:ALEPSYY GO:GO:0060738
            GO:GO:0060528 EMBL:DAAA02052774 IPI:IPI00923961
            RefSeq:NP_001192958.1 UniGene:Bt.88447 Ensembl:ENSBTAT00000061052
            GeneID:503579 KEGG:bta:503579 NextBio:20866216 Uniprot:F1MNS7
        Length = 468

 Score = 240 (89.5 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 44/73 (60%), Positives = 52/73 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYR+    W+NSIRH+LS N CF KVAR
Sbjct:   174 SYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVAR 233

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYW +
Sbjct:   234 SPDKPGKGSYWTL 246


>UNIPROTKB|F1SHK8 [details] [associations]
            symbol:FOXA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060743 "epithelial cell maturation involved in
            prostate gland development" evidence=IEA] [GO:0060741 "prostate
            gland stromal morphogenesis" evidence=IEA] [GO:0060740 "prostate
            gland epithelium morphogenesis" evidence=IEA] [GO:0060738
            "epithelial-mesenchymal signaling involved in prostate gland
            development" evidence=IEA] [GO:0060528 "secretory columnal luminar
            epithelial cell differentiation involved in prostate glandular
            acinus development" evidence=IEA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045931 "positive regulation of mitotic cell cycle"
            evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042593 "glucose
            homeostasis" evidence=IEA] [GO:0042445 "hormone metabolic process"
            evidence=IEA] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=IEA] [GO:0032355
            "response to estradiol stimulus" evidence=IEA] [GO:0010719
            "negative regulation of epithelial to mesenchymal transition"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0051091 GO:GO:0032355 GO:GO:0045931 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0042593 GO:GO:0006338 GO:GO:0044212 GO:GO:0045666
            GO:GO:0042445 GO:GO:0033148 GO:GO:0060740 GO:GO:0060487
            GO:GO:0048665 GO:GO:0060441 GO:GO:0010719 GO:GO:0060741
            GeneTree:ENSGT00700000104475 GO:GO:0060743 InterPro:IPR018533
            Pfam:PF09354 CTD:3169 KO:K09387 OMA:ALEPSYY GO:GO:0060738
            GO:GO:0060528 EMBL:CT737389 RefSeq:XP_001929311.1 UniGene:Ssc.61132
            Ensembl:ENSSSCT00000002172 GeneID:100156502 KEGG:ssc:100156502
            Uniprot:F1SHK8
        Length = 468

 Score = 240 (89.5 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 44/73 (60%), Positives = 52/73 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYR+    W+NSIRH+LS N CF KVAR
Sbjct:   173 SYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVAR 232

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYW +
Sbjct:   233 SPDKPGKGSYWTL 245


>MGI|MGI:1347472 [details] [associations]
            symbol:Foxa1 "forkhead box A1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IBA;IMP] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=ISO] [GO:0003677 "DNA
            binding" evidence=ISO;IDA] [GO:0003690 "double-stranded DNA
            binding" evidence=ISO;IBA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISO;IDA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
            factor complex" evidence=IBA] [GO:0006338 "chromatin remodeling"
            evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=ISO;IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010468
            "regulation of gene expression" evidence=IGI] [GO:0010719 "negative
            regulation of epithelial to mesenchymal transition" evidence=ISO]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0019904
            "protein domain specific binding" evidence=ISO;IBA] [GO:0030324
            "lung development" evidence=IGI] [GO:0032355 "response to estradiol
            stimulus" evidence=ISO] [GO:0033148 "positive regulation of
            intracellular estrogen receptor signaling pathway" evidence=ISO]
            [GO:0035239 "tube morphogenesis" evidence=IMP] [GO:0042445 "hormone
            metabolic process" evidence=IMP] [GO:0042593 "glucose homeostasis"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=ISO] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IGI;IMP] [GO:0045931 "positive regulation
            of mitotic cell cycle" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO;IGI;IDA] [GO:0048665 "neuron fate specification"
            evidence=IGI] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=ISO] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IGI] [GO:0060487
            "lung epithelial cell differentiation" evidence=IGI] [GO:0060528
            "secretory columnal luminar epithelial cell differentiation
            involved in prostate glandular acinus development" evidence=IMP]
            [GO:0060738 "epithelial-mesenchymal signaling involved in prostate
            gland development" evidence=IGI] [GO:0060740 "prostate gland
            epithelium morphogenesis" evidence=IMP] [GO:0060741 "prostate gland
            stromal morphogenesis" evidence=IMP] [GO:0060743 "epithelial cell
            maturation involved in prostate gland development" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1347472
            GO:GO:0019904 GO:GO:0051091 GO:GO:0032355 GO:GO:0045931
            GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0042593 GO:GO:0005667 GO:GO:0003705 GO:GO:0006338
            GO:GO:0000122 GO:GO:0008301 GO:GO:0009790 GO:GO:0044212
            GO:GO:0003690 GO:GO:0045666 GO:GO:0008134 GO:GO:0042445
            GO:GO:0007389 GO:GO:0033148 GO:GO:0060740 GO:GO:0060487
            GO:GO:0048665 GO:GO:0051090 GO:GO:0060441 GO:GO:0010719
            GO:GO:0060741 eggNOG:COG5025 GeneTree:ENSGT00700000104475
            GO:GO:0060743 InterPro:IPR018533 Pfam:PF09354 CTD:3169
            HOGENOM:HOG000231817 HOVERGEN:HBG006621 KO:K09387 OMA:ALEPSYY
            GO:GO:0060738 GO:GO:0060528 EMBL:X74936 EMBL:U44752 EMBL:BC096524
            IPI:IPI00310116 PIR:A54258 RefSeq:NP_032285.2 UniGene:Mm.4578
            ProteinModelPortal:P35582 SMR:P35582 STRING:P35582
            PhosphoSite:P35582 PRIDE:P35582 Ensembl:ENSMUST00000044380
            GeneID:15375 KEGG:mmu:15375 UCSC:uc007nps.1 InParanoid:Q4VA63
            OrthoDB:EOG466VMM NextBio:288026 Bgee:P35582 CleanEx:MM_FOXA1
            Genevestigator:P35582 GermOnline:ENSMUSG00000035451 Uniprot:P35582
        Length = 468

 Score = 240 (89.5 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 44/73 (60%), Positives = 52/73 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYR+    W+NSIRH+LS N CF KVAR
Sbjct:   174 SYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVAR 233

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYW +
Sbjct:   234 SPDKPGKGSYWTL 246


>UNIPROTKB|E2QS90 [details] [associations]
            symbol:FOXD3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0001892 "embryonic placenta
            development" evidence=IEA] [GO:0001829 "trophectodermal cell
            differentiation" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0044212
            GO:GO:0001829 GO:GO:0001892 Ensembl:ENSCAFT00000021812
            Uniprot:E2QS90
        Length = 411

 Score = 238 (88.8 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 43/83 (51%), Positives = 58/83 (69%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K   +K   SY +LI +AI  +PQ ++TL+ I +FI++ FPYYRE    W+NSIRHNLSL
Sbjct:   137 KNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSL 196

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             N CF K+ R   +PGKG+YW +D
Sbjct:   197 NDCFVKIPREPGNPGKGNYWTLD 219


>UNIPROTKB|P55317 [details] [associations]
            symbol:FOXA1 "Hepatocyte nuclear factor 3-alpha"
            species:9606 "Homo sapiens" [GO:0042445 "hormone metabolic process"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010817
            "regulation of hormone levels" evidence=IBA] [GO:0019904 "protein
            domain specific binding" evidence=IBA] [GO:0042593 "glucose
            homeostasis" evidence=IBA] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IBA] [GO:0048665 "neuron fate
            specification" evidence=IBA] [GO:0060441 "epithelial tube branching
            involved in lung morphogenesis" evidence=IBA] [GO:0060487 "lung
            epithelial cell differentiation" evidence=IBA] [GO:0060528
            "secretory columnal luminar epithelial cell differentiation
            involved in prostate glandular acinus development" evidence=IBA]
            [GO:0060738 "epithelial-mesenchymal signaling involved in prostate
            gland development" evidence=IBA] [GO:0060740 "prostate gland
            epithelium morphogenesis" evidence=IBA] [GO:0060741 "prostate gland
            stromal morphogenesis" evidence=IBA] [GO:0060743 "epithelial cell
            maturation involved in prostate gland development" evidence=IBA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IMP] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=IMP] [GO:0033148 "positive regulation
            of intracellular estrogen receptor signaling pathway" evidence=IMP]
            [GO:0032355 "response to estradiol stimulus" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=TAS] [GO:0001077 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=ISS] [GO:0010719 "negative regulation of
            epithelial to mesenchymal transition" evidence=IMP] [GO:2000049
            "positive regulation of cell-cell adhesion mediated by cadherin"
            evidence=IC] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0019904 GO:GO:0051091 GO:GO:0032355 GO:GO:0045931
            GO:GO:0043565 Pathway_Interaction_DB:hnf3apathway GO:GO:2000049
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593
            Pathway_Interaction_DB:hnf3bpathway GO:GO:0005667 GO:GO:0003705
            GO:GO:0001077 GO:GO:0006338 GO:GO:0008301 GO:GO:0009790
            GO:GO:0044212 EMBL:CH471078 GO:GO:0003690 GO:GO:0045666
            GO:GO:0008134 GO:GO:0042445 GO:GO:0007389 GO:GO:0033148
            GO:GO:0060740 GO:GO:0060487 GO:GO:0048665 GO:GO:0010817
            GO:GO:0060441 GO:GO:0010719 GO:GO:0060741 eggNOG:COG5025
            GO:GO:0060743 InterPro:IPR018533 Pfam:PF09354 EMBL:U39840
            EMBL:AF176112 EMBL:AF176111 EMBL:AF303743 EMBL:AF303742
            EMBL:AK313785 EMBL:AL121790 EMBL:BC033890 IPI:IPI01014973
            PIR:S70357 RefSeq:NP_004487.2 UniGene:Hs.163484
            ProteinModelPortal:P55317 SMR:P55317 DIP:DIP-57138N IntAct:P55317
            MINT:MINT-2804254 STRING:P55317 PhosphoSite:P55317 DMDM:296434509
            PaxDb:P55317 PRIDE:P55317 DNASU:3169 Ensembl:ENST00000250448
            GeneID:3169 KEGG:hsa:3169 UCSC:uc001wuf.3 CTD:3169
            GeneCards:GC14M038059 H-InvDB:HIX0011609 HGNC:HGNC:5021
            HPA:CAB011595 MIM:602294 neXtProt:NX_P55317 PharmGKB:PA201090
            HOGENOM:HOG000231817 HOVERGEN:HBG006621 InParanoid:P55317 KO:K09387
            OMA:ALEPSYY OrthoDB:EOG4C2HCT PhylomeDB:P55317
            Pathway_Interaction_DB:hnf3pathway ChiTaRS:FOXA1 GenomeRNAi:3169
            NextBio:12564 ArrayExpress:P55317 Bgee:P55317 CleanEx:HS_FOXA1
            Genevestigator:P55317 GO:GO:0060738 GO:GO:0060528 Uniprot:P55317
        Length = 472

 Score = 240 (89.5 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 44/73 (60%), Positives = 52/73 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYR+    W+NSIRH+LS N CF KVAR
Sbjct:   174 SYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVAR 233

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYW +
Sbjct:   234 SPDKPGKGSYWTL 246


>UNIPROTKB|F6UTY3 [details] [associations]
            symbol:FOXA1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0019904 "protein domain specific binding"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GeneTree:ENSGT00700000104475 InterPro:IPR018533
            Pfam:PF09354 OMA:ALEPSYY Ensembl:ENSCAFT00000021805
            EMBL:AAEX03005682 EMBL:AAEX03005683 Uniprot:F6UTY3
        Length = 481

 Score = 240 (89.5 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 44/73 (60%), Positives = 52/73 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYR+    W+NSIRH+LS N CF KVAR
Sbjct:   174 SYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVAR 233

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYW +
Sbjct:   234 SPDKPGKGSYWTL 246


>POMBASE|SPBC4C3.12 [details] [associations]
            symbol:sep1 "fork head transcription factor Sep1"
            species:4896 "Schizosaccharomyces pombe" [GO:0000978 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding" evidence=IDA] [GO:0000982 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity" evidence=IC] [GO:0001077 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in positive regulation of transcription"
            evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005667
            "transcription factor complex" evidence=IC] [GO:0045896 "regulation
            of transcription during mitosis" evidence=IGI;IMP] [GO:0097221
            "MADS box-forkhead transcription factor complex" evidence=IDA]
            [GO:1900405 "regulation of cytokinetic cell separation by
            regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:1901037 "regulation of transcription from RNA
            polymerase II promoter during M/G1 transition of mitotic cell
            cycle" evidence=IC] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 PomBase:SPBC4C3.12 EMBL:CU329671
            Gene3D:1.10.10.10 InterPro:IPR011991 GenomeReviews:CU329671_GR
            GO:GO:0000978 GO:GO:0001077 GO:GO:1900405 GO:GO:0045896
            GO:GO:0000917 eggNOG:COG5025 GO:GO:0097221 GO:GO:1901037
            OrthoDB:EOG4XKZH6 EMBL:U88191 PIR:JC6500 PIR:T40493
            RefSeq:NP_596301.1 ProteinModelPortal:O43058 STRING:O43058
            EnsemblFungi:SPBC4C3.12.1 GeneID:2540866 KEGG:spo:SPBC4C3.12
            NextBio:20801982 Uniprot:O43058
        Length = 663

 Score = 243 (90.6 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 48/102 (47%), Positives = 71/102 (69%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI ++I  +P  R+TL+ IY +I++TF +Y ++N GW+NSIRHNLSLNK F K+ R
Sbjct:   132 SYAMLIGMSIIRSPDRRLTLSAIYDWISNTFSFYNKSNNGWQNSIRHNLSLNKAFMKIER 191

Query:    75 PKDDPGKGSYWAIDYNHTADDGPSKKKVKLPRVS--PYSPVE 114
             P++ PGKG +W+I   H  ++   K K++ P V+  P  PV+
Sbjct:   192 PRNLPGKGHFWSIRPGH--EEQFLKLKLRKPGVNSRPAPPVQ 231


>ZFIN|ZDB-GENE-061214-6 [details] [associations]
            symbol:foxe3 "forkhead box E3" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0001654 "eye development"
            evidence=IMP] [GO:0002088 "lens development in camera-type eye"
            evidence=IMP] [GO:0002089 "lens morphogenesis in camera-type eye"
            evidence=IMP] [GO:0060023 "soft palate development" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0016477 "cell
            migration" evidence=IBA] [GO:0048484 "enteric nervous system
            development" evidence=IRD] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IRD] [GO:0007422 "peripheral nervous system
            development" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0030878 "thyroid gland development" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IBA] [GO:0006590 "thyroid hormone
            generation" evidence=IBA] [GO:0005667 "transcription factor
            complex" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0060022 "hard palate development" evidence=IBA]
            [GO:0048846 "axon extension involved in axon guidance"
            evidence=IRD] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-061214-6 GO:GO:0016477 GO:GO:0043565
            GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0051090 GO:GO:0006590
            GO:GO:0002089 GO:GO:0060023 GO:GO:0009888 GO:GO:0060022
            GO:GO:0030878 GeneTree:ENSGT00700000104135 GO:GO:0048937
            HOVERGEN:HBG051642 KO:K09398 GO:GO:0048562 CTD:2301 EMBL:FP016062
            EMBL:BC163348 EMBL:BC163364 IPI:IPI00613897 RefSeq:NP_001073150.2
            UniGene:Dr.104252 SMR:B0UXI3 STRING:B0UXI3
            Ensembl:ENSDART00000091436 GeneID:570855 KEGG:dre:570855
            OMA:RENSKKW NextBio:20890323 Uniprot:B0UXI3
        Length = 422

 Score = 238 (88.8 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 47/101 (46%), Positives = 65/101 (64%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI+N+P+ ++TL  IY+FI   FP+YRE +  W+NSIRHNL+LN CF K+ R
Sbjct:   107 SYIALIAMAIANSPERKLTLGGIYKFIMERFPFYRENSKKWQNSIRHNLTLNDCFVKIPR 166

Query:    75 PKDDPGKGSYWAID--YNHTADDGP---SKKKVKLPRVSPY 110
                 PGKG+YW +D       D+G     +K+ K   VS Y
Sbjct:   167 EPGRPGKGNYWTLDPAAEDMFDNGSFLRRRKRFKRTDVSTY 207


>UNIPROTKB|Q9DEN4 [details] [associations]
            symbol:foxd3-a "Forkhead box protein D3-A" species:8355
            "Xenopus laevis" [GO:0001707 "mesoderm formation" evidence=IMP]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0014034 "neural crest cell fate commitment" evidence=IMP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IMP;IDA] [GO:0050768 "negative regulation of neurogenesis"
            evidence=IMP] [GO:0050769 "positive regulation of neurogenesis"
            evidence=IMP] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045892 GO:GO:0003677
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0050769 GO:GO:0001707 GO:GO:0050768 KO:K09397
            HSSP:Q63245 GO:GO:0014034 HOVERGEN:HBG051641 EMBL:AB014611
            EMBL:AJ298865 EMBL:BC123272 PIR:G56556 RefSeq:NP_001079026.1
            UniGene:Xl.525 ProteinModelPortal:Q9DEN4 SMR:Q9DEN4 GeneID:373548
            KEGG:xla:373548 CTD:373548 Xenbase:XB-GENE-865691 Uniprot:Q9DEN4
        Length = 371

 Score = 235 (87.8 bits), Expect = 1.4e-19, P = 1.4e-19
 Identities = 42/83 (50%), Positives = 58/83 (69%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K   +K   SY +LI ++I  +PQ ++TL+ I +FI++ FPYYRE    W+NSIRHNLSL
Sbjct:    89 KNSLVKPPYSYIALITMSILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSL 148

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             N CF K+ R   +PGKG+YW +D
Sbjct:   149 NDCFVKIPREPGNPGKGNYWTLD 171


>UNIPROTKB|F6USR8 [details] [associations]
            symbol:FOXD3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 OMA:AAGAYSH Ensembl:ENSCAFT00000021812
            EMBL:AAEX03003765 EMBL:AAEX03003766 Uniprot:F6USR8
        Length = 439

 Score = 238 (88.8 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 43/83 (51%), Positives = 58/83 (69%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K   +K   SY +LI +AI  +PQ ++TL+ I +FI++ FPYYRE    W+NSIRHNLSL
Sbjct:   137 KNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSL 196

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             N CF K+ R   +PGKG+YW +D
Sbjct:   197 NDCFVKIPREPGNPGKGNYWTLD 219


>UNIPROTKB|H9GWC4 [details] [associations]
            symbol:FOXK2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104094 OMA:HGQVNNA Ensembl:ENSCAFT00000020603
            Uniprot:H9GWC4
        Length = 573

 Score = 241 (89.9 bits), Expect = 1.6e-19, P = 1.6e-19
 Identities = 45/74 (60%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AI+ AP  ++TLN IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   175 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 234

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   235 SQEEPGKGSFWRID 248


>UNIPROTKB|F1MP14 [details] [associations]
            symbol:F1MP14 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0030308 "negative
            regulation of cell growth" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339 GO:GO:0045892
            GO:GO:0045893 GO:GO:0005730 GO:GO:0030308 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GeneTree:ENSGT00700000104094
            OMA:CEVGPKE EMBL:DAAA02058363 EMBL:DAAA02058364 IPI:IPI00701447
            Ensembl:ENSBTAT00000025710 Uniprot:F1MP14
        Length = 707

 Score = 232 (86.7 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
 Identities = 44/74 (59%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AIS+A   ++TL+ IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   291 SYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 350

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   351 SQEEPGKGSFWRID 364

 Score = 35 (17.4 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
 Identities = 11/48 (22%), Positives = 18/48 (37%)

Query:    90 NHTADDGPSKKKVKLPRVSPYSPVECXXXXXXXDVHNSKPPTSISSVP 137
             + +A   P+   +  PR S     EC         H+      ++SVP
Sbjct:   396 SRSAPASPTHPGLMSPRSSGLQTPECLSREGSPIPHDPDFGAKLTSVP 443


>RGD|1590042 [details] [associations]
            symbol:LOC688330 "similar to forkhead box K2 isoform 1"
            species:10116 "Rattus norvegicus" [GO:0000287 "magnesium ion
            binding" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0051090 "regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            InterPro:IPR000253 InterPro:IPR001766 InterPro:IPR008984
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039
            SMART:SM00240 SMART:SM00339 RGD:1305408 RGD:1590042 GO:GO:0000287
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0009888
            GeneTree:ENSGT00700000104094 IPI:IPI00361779
            Ensembl:ENSRNOT00000054919 ArrayExpress:D3ZY28 Uniprot:D3ZY28
        Length = 580

 Score = 241 (89.9 bits), Expect = 1.6e-19, P = 1.6e-19
 Identities = 45/74 (60%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AI+ AP  ++TLN IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   253 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 312

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   313 SQEEPGKGSFWRID 326


>UNIPROTKB|F1NSF2 [details] [associations]
            symbol:FOXK1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0030308 "negative regulation of cell
            growth" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0045892
            GO:GO:0045893 GO:GO:0005730 GO:GO:0030308 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357
            GO:GO:0006351 GeneTree:ENSGT00700000104094 OMA:CEVGPKE
            EMBL:AADN02023808 IPI:IPI00599164 Ensembl:ENSGALT00000007098
            Uniprot:F1NSF2
        Length = 531

 Score = 240 (89.5 bits), Expect = 1.7e-19, P = 1.7e-19
 Identities = 45/74 (60%), Positives = 57/74 (77%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AIS+AP  ++TL+ IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   127 SYAQLIVQAISSAPDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 186

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   187 SQEEPGKGSFWRID 200


>UNIPROTKB|E2QUB0 [details] [associations]
            symbol:FOXF1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0090131 "mesenchyme migration" evidence=IEA]
            [GO:0072189 "ureter development" evidence=IEA] [GO:0071407
            "cellular response to organic cyclic compound" evidence=IEA]
            [GO:0071345 "cellular response to cytokine stimulus" evidence=IEA]
            [GO:0061030 "epithelial cell differentiation involved in mammary
            gland alveolus development" evidence=IEA] [GO:0060841 "venous blood
            vessel development" evidence=IEA] [GO:0060463 "lung lobe
            morphogenesis" evidence=IEA] [GO:0060461 "right lung morphogenesis"
            evidence=IEA] [GO:0060446 "branching involved in open tracheal
            system development" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0060438
            "trachea development" evidence=IEA] [GO:0060426 "lung vasculature
            development" evidence=IEA] [GO:0051150 "regulation of smooth muscle
            cell differentiation" evidence=IEA] [GO:0051145 "smooth muscle cell
            differentiation" evidence=IEA] [GO:0050728 "negative regulation of
            inflammatory response" evidence=IEA] [GO:0048617 "embryonic foregut
            morphogenesis" evidence=IEA] [GO:0048613 "embryonic ectodermal
            digestive tract morphogenesis" evidence=IEA] [GO:0048371 "lateral
            mesodermal cell differentiation" evidence=IEA] [GO:0048286 "lung
            alveolus development" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045198 "establishment of epithelial cell
            apical/basal polarity" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043305 "negative
            regulation of mast cell degranulation" evidence=IEA] [GO:0031016
            "pancreas development" evidence=IEA] [GO:0030335 "positive
            regulation of cell migration" evidence=IEA] [GO:0030198
            "extracellular matrix organization" evidence=IEA] [GO:0016337
            "cell-cell adhesion" evidence=IEA] [GO:0014822 "detection of
            wounding" evidence=IEA] [GO:0010811 "positive regulation of
            cell-substrate adhesion" evidence=IEA] [GO:0007494 "midgut
            development" evidence=IEA] [GO:0007368 "determination of left/right
            symmetry" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003214
            "cardiac left ventricle morphogenesis" evidence=IEA] [GO:0003197
            "endocardial cushion development" evidence=IEA] [GO:0002053
            "positive regulation of mesenchymal cell proliferation"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001701
            "in utero embryonic development" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0050728
            GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0030198
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0007494 GO:GO:0000122 GO:GO:0001756 GO:GO:0044212
            GO:GO:0048286 GO:GO:0016337 GO:GO:0060841 GO:GO:0007368
            GO:GO:0051145 GO:GO:0003197 GO:GO:0030335 GO:GO:0001570
            GO:GO:0010811 GO:GO:0031016 GO:GO:0071407 GO:GO:0060438
            GO:GO:0007224 GO:GO:0048617 GO:GO:0002053 GO:GO:0051150
            GO:GO:0060441 GO:GO:0045198 GO:GO:0003214 GO:GO:0060446
            GO:GO:0071345 GO:GO:0043305 GO:GO:0060426
            GeneTree:ENSGT00690000101636 GO:GO:0060463 GO:GO:0061030 CTD:2294
            KO:K09399 OMA:MTAEVQQ GO:GO:0014822 GO:GO:0048613 GO:GO:0048371
            GO:GO:0090131 GO:GO:0060461 GO:GO:0072189 EMBL:AAEX03003995
            RefSeq:XP_546792.2 ProteinModelPortal:E2QUB0
            Ensembl:ENSCAFT00000031689 GeneID:489672 KEGG:cfa:489672
            NextBio:20862824 Uniprot:E2QUB0
        Length = 354

 Score = 233 (87.1 bits), Expect = 1.7e-19, P = 1.7e-19
 Identities = 41/74 (55%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P  R+TL+EIYQF+   FP++R +  GWKNS+RHNLSLN+CF K+ +
Sbjct:    27 SYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPK 86

Query:    75 PKDDPGKGSYWAID 88
                 PGKG YW ID
Sbjct:    87 GLGRPGKGHYWTID 100


>ZFIN|ZDB-GENE-030131-5310 [details] [associations]
            symbol:si:ch211-262e15.1 "si:ch211-262e15.1"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339
            ZFIN:ZDB-GENE-030131-5310 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:2.60.200.20
            SUPFAM:SSF49879 GeneTree:ENSGT00700000104094 KO:K09404
            EMBL:BX539347 EMBL:FP326646 IPI:IPI00636588 RefSeq:XP_001922856.1
            Ensembl:ENSDART00000018159 GeneID:798356 KEGG:dre:798356
            NextBio:20933376 Bgee:E7FFM9 Uniprot:E7FFM9
        Length = 597

 Score = 241 (89.9 bits), Expect = 1.7e-19, P = 1.7e-19
 Identities = 45/74 (60%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AI+ AP  ++TLN IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   215 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 274

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   275 SQEEPGKGSFWRID 288


>ZFIN|ZDB-GENE-990415-78 [details] [associations]
            symbol:foxa1 "forkhead box A1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0019904 "protein domain specific binding"
            evidence=IEA;IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA;IBA] [GO:0048319 "axial
            mesoderm morphogenesis" evidence=IGI] [GO:0060487 "lung epithelial
            cell differentiation" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0010817 "regulation of hormone levels"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0009790 "embryo
            development" evidence=IBA] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IBA] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0060441 "epithelial tube branching
            involved in lung morphogenesis" evidence=IBA] [GO:0042593 "glucose
            homeostasis" evidence=IBA] [GO:0005667 "transcription factor
            complex" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0048665 "neuron fate specification" evidence=IBA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-990415-78 GO:GO:0019904 GO:GO:0043565
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0045666 GO:GO:0008134 GO:GO:0007389
            GO:GO:0060487 GO:GO:0048665 GO:GO:0051090 GO:GO:0010817
            GO:GO:0060441 GO:GO:0048319 HSSP:Q99958 InterPro:IPR018533
            Pfam:PF09354 HOVERGEN:HBG006621 EMBL:AY247950 IPI:IPI00496878
            UniGene:Dr.75817 ProteinModelPortal:Q800Q3 SMR:Q800Q3 STRING:Q800Q3
            InParanoid:Q800Q3 ArrayExpress:Q800Q3 Uniprot:Q800Q3
        Length = 427

 Score = 237 (88.5 bits), Expect = 1.8e-19, P = 1.8e-19
 Identities = 43/73 (58%), Positives = 52/73 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYR+    W+NSIRH+LS N CF KV+R
Sbjct:   161 SYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVSR 220

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYW +
Sbjct:   221 SPDKPGKGSYWTL 233


>MGI|MGI:1347473 [details] [associations]
            symbol:Foxd3 "forkhead box D3" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IBA;IDA] [GO:0000790 "nuclear
            chromatin" evidence=ISO] [GO:0000977 "RNA polymerase II regulatory
            region sequence-specific DNA binding" evidence=ISO] [GO:0001227
            "RNA polymerase II transcription regulatory region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=ISO]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=IBA] [GO:0001701 "in utero embryonic development"
            evidence=IDA] [GO:0001755 "neural crest cell migration"
            evidence=IBA] [GO:0001822 "kidney development" evidence=IBA]
            [GO:0001829 "trophectodermal cell differentiation" evidence=IMP]
            [GO:0001892 "embryonic placenta development" evidence=IMP]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
            "double-stranded DNA binding" evidence=ISO;IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IC] [GO:0005667
            "transcription factor complex" evidence=IBA;TAS] [GO:0006351
            "transcription, DNA-dependent" evidence=TAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0007422 "peripheral nervous system development" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0030318
            "melanocyte differentiation" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IBA] [GO:0048484 "enteric
            nervous system development" evidence=IBA] [GO:0048485 "sympathetic
            nervous system development" evidence=IBA] [GO:0048846 "axon
            extension involved in axon guidance" evidence=IBA] [GO:0048937
            "lateral line nerve glial cell development" evidence=IBA]
            [GO:0050935 "iridophore differentiation" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0051216 "cartilage development"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 MGI:MGI:1347473 GO:GO:0001755 GO:GO:0043565
            GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0008301
            GO:GO:0044212 GO:GO:0001822 GO:GO:0003690 GO:GO:0051216
            GO:GO:0001829 GO:GO:0008134 EMBL:BX005053 GO:GO:0007389
            GO:GO:0001658 GO:GO:0048485 GO:GO:0030318 GO:GO:0001892
            GO:GO:0048484 GO:GO:0051090 GO:GO:0048846 eggNOG:COG5025 KO:K09397
            GO:GO:0048937 HOVERGEN:HBG051641 GO:GO:0050935 CTD:27022
            EMBL:U41047 EMBL:AF067421 IPI:IPI00828232 RefSeq:NP_034555.3
            UniGene:Mm.4758 ProteinModelPortal:Q61060 SMR:Q61060 STRING:Q61060
            PhosphoSite:Q61060 PRIDE:Q61060 DNASU:15221 GeneID:15221
            KEGG:mmu:15221 InParanoid:Q61060 OrthoDB:EOG4FN4KH NextBio:287807
            Bgee:Q61060 CleanEx:MM_FOXD3 Genevestigator:Q61060
            GermOnline:ENSMUSG00000067261 Uniprot:Q61060
        Length = 465

 Score = 238 (88.8 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 43/83 (51%), Positives = 58/83 (69%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K   +K   SY +LI +AI  +PQ ++TL+ I +FI++ FPYYRE    W+NSIRHNLSL
Sbjct:   126 KNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSL 185

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             N CF K+ R   +PGKG+YW +D
Sbjct:   186 NDCFVKIPREPGNPGKGNYWTLD 208


>UNIPROTKB|F1NNS0 [details] [associations]
            symbol:FOXK2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0000287 "magnesium ion binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000253 InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039 SMART:SM00240
            SMART:SM00339 GO:GO:0005634 GO:GO:0000287 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:2.60.200.20 GeneTree:ENSGT00700000104094 EMBL:AADN02029895
            EMBL:AADN02029896 EMBL:AADN02029897 IPI:IPI00584785
            Ensembl:ENSGALT00000002396 Uniprot:F1NNS0
        Length = 630

 Score = 241 (89.9 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 45/74 (60%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AI+ AP  ++TLN IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   232 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 291

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   292 SQEEPGKGSFWRID 305


>UNIPROTKB|Q7ZX03 [details] [associations]
            symbol:foxk2 "Forkhead box protein K2" species:8355
            "Xenopus laevis" [GO:0000287 "magnesium ion binding" evidence=ISS]
            [GO:0003677 "DNA binding" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            InterPro:IPR000253 InterPro:IPR001766 InterPro:IPR008984
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039
            SMART:SM00240 SMART:SM00339 GO:GO:0005634 GO:GO:0000287
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 Gene3D:2.60.200.20 SUPFAM:SSF49879 HSSP:Q01167
            HOVERGEN:HBG051649 EMBL:BC046369 EMBL:BC112949 UniGene:Xl.23253
            ProteinModelPortal:Q7ZX03 SMR:Q7ZX03 Xenbase:XB-GENE-864986
            Uniprot:Q7ZX03
        Length = 642

 Score = 241 (89.9 bits), Expect = 2.0e-19, P = 2.0e-19
 Identities = 45/74 (60%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AI+ AP  ++TLN IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   223 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 282

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   283 SQEEPGKGSFWRID 296


>UNIPROTKB|Q9UJU5 [details] [associations]
            symbol:FOXD3 "Forkhead box protein D3" species:9606 "Homo
            sapiens" [GO:0001658 "branching involved in ureteric bud
            morphogenesis" evidence=IBA] [GO:0001755 "neural crest cell
            migration" evidence=IBA] [GO:0001822 "kidney development"
            evidence=IBA] [GO:0001829 "trophectodermal cell differentiation"
            evidence=IBA] [GO:0001892 "embryonic placenta development"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0048484
            "enteric nervous system development" evidence=IBA] [GO:0048485
            "sympathetic nervous system development" evidence=IBA] [GO:0048846
            "axon extension involved in axon guidance" evidence=IBA]
            [GO:0048937 "lateral line nerve glial cell development"
            evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS;IDA] [GO:0001701 "in utero embryonic development"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0000977 "RNA
            polymerase II regulatory region sequence-specific DNA binding"
            evidence=IDA] [GO:0001227 "RNA polymerase II transcription
            regulatory region sequence-specific DNA binding transcription
            factor activity involved in negative regulation of transcription"
            evidence=IDA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0001755 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0000790 GO:GO:0001822 GO:GO:0003690
            GO:GO:0051216 GO:GO:0001829 GO:GO:0008134 EMBL:AL049636
            GO:GO:0007389 GO:GO:0001658 GO:GO:0048485 GO:GO:0030318
            GO:GO:0000977 GO:GO:0001892 GO:GO:0048484 GO:GO:0051090
            GO:GO:0048846 GO:GO:0001227 KO:K09397 GO:GO:0048937
            HOVERGEN:HBG051641 GO:GO:0050935 HOGENOM:HOG000231285 CTD:27022
            EMBL:AF197560 EMBL:L12142 IPI:IPI00007164 RefSeq:NP_036315.1
            UniGene:Hs.546573 ProteinModelPortal:Q9UJU5 SMR:Q9UJU5
            IntAct:Q9UJU5 STRING:Q9UJU5 PhosphoSite:Q9UJU5 DMDM:8134475
            PRIDE:Q9UJU5 DNASU:27022 Ensembl:ENST00000371116 GeneID:27022
            KEGG:hsa:27022 UCSC:uc001dax.2 GeneCards:GC01P063788 HGNC:HGNC:3804
            HPA:CAB022455 MIM:607836 MIM:611539 neXtProt:NX_Q9UJU5
            Orphanet:247871 PharmGKB:PA28221 InParanoid:Q9UJU5 OMA:AAGAYSH
            PhylomeDB:Q9UJU5 GenomeRNAi:27022 NextBio:49550 Bgee:Q9UJU5
            CleanEx:HS_FOXD3 Genevestigator:Q9UJU5 GermOnline:ENSG00000187140
            Uniprot:Q9UJU5
        Length = 478

 Score = 238 (88.8 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 43/83 (51%), Positives = 58/83 (69%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K   +K   SY +LI +AI  +PQ ++TL+ I +FI++ FPYYRE    W+NSIRHNLSL
Sbjct:   136 KNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSL 195

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             N CF K+ R   +PGKG+YW +D
Sbjct:   196 NDCFVKIPREPGNPGKGNYWTLD 218


>RGD|1305408 [details] [associations]
            symbol:Foxk2 "forkhead box K2" species:10116 "Rattus norvegicus"
            [GO:0000287 "magnesium ion binding" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339 RGD:1305408
            GO:GO:0000287 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0009888 IPI:IPI00949827
            Ensembl:ENSRNOT00000068086 ArrayExpress:F1LS44 Uniprot:F1LS44
        Length = 650

 Score = 241 (89.9 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 45/74 (60%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AI+ AP  ++TLN IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   253 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 312

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   313 SQEEPGKGSFWRID 326


>MGI|MGI:1916087 [details] [associations]
            symbol:Foxk2 "forkhead box K2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0000287 "magnesium ion
            binding" evidence=ISO;IBA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] InterPro:IPR000253
            InterPro:IPR001766 InterPro:IPR008984 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039 SMART:SM00240
            SMART:SM00339 MGI:MGI:1916087 GO:GO:0000287 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:2.60.200.20
            SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 EMBL:AL808021 eggNOG:COG5025
            GO:GO:0009888 HSSP:Q01167 GeneTree:ENSGT00700000104094
            HOGENOM:HOG000072588 HOVERGEN:HBG051649 KO:K09404 CTD:3607
            OMA:HGQVNNA OrthoDB:EOG4XD3QX EMBL:EU882160 EMBL:AK150439
            IPI:IPI00808277 IPI:IPI00854998 RefSeq:NP_001074401.2
            UniGene:Mm.209750 ProteinModelPortal:Q3UCQ1 SMR:Q3UCQ1
            STRING:Q3UCQ1 PhosphoSite:Q3UCQ1 PaxDb:Q3UCQ1 PRIDE:Q3UCQ1
            DNASU:68837 Ensembl:ENSMUST00000106113 GeneID:68837 KEGG:mmu:68837
            UCSC:uc007mvs.1 InParanoid:B5AZX0 NextBio:328023 Bgee:Q3UCQ1
            CleanEx:MM_FOXK2 Genevestigator:Q3UCQ1
            GermOnline:ENSMUSG00000039275 Uniprot:Q3UCQ1
        Length = 651

 Score = 241 (89.9 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 45/74 (60%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AI+ AP  ++TLN IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   253 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 312

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   313 SQEEPGKGSFWRID 326


>UNIPROTKB|E1BIV1 [details] [associations]
            symbol:FOXD3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001892 "embryonic placenta development"
            evidence=IEA] [GO:0001829 "trophectodermal cell differentiation"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0044212 GO:GO:0001829
            GO:GO:0001892 GeneTree:ENSGT00700000104135 KO:K09397 CTD:27022
            OMA:AAGAYSH EMBL:DAAA02008563 IPI:IPI00687955 RefSeq:XP_002686387.1
            RefSeq:XP_610898.3 Ensembl:ENSBTAT00000011206 GeneID:532383
            KEGG:bta:532383 NextBio:20875676 Uniprot:E1BIV1
        Length = 481

 Score = 238 (88.8 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 43/83 (51%), Positives = 58/83 (69%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K   +K   SY +LI +AI  +PQ ++TL+ I +FI++ FPYYRE    W+NSIRHNLSL
Sbjct:   136 KNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSL 195

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             N CF K+ R   +PGKG+YW +D
Sbjct:   196 NDCFVKIPREPGNPGKGNYWTLD 218


>UNIPROTKB|F1S012 [details] [associations]
            symbol:LOC100522272 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0000287
            "magnesium ion binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339 GO:GO:0005634
            GO:GO:0000287 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 Gene3D:2.60.200.20 SUPFAM:SSF49879 OMA:HGQVNNA
            EMBL:FP085448 RefSeq:XP_003357968.1 Ensembl:ENSSSCT00000018643
            GeneID:100522272 Uniprot:F1S012
        Length = 656

 Score = 241 (89.9 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 45/74 (60%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AI+ AP  ++TLN IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   260 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 319

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   320 SQEEPGKGSFWRID 333


>UNIPROTKB|Q01167 [details] [associations]
            symbol:FOXK2 "Forkhead box protein K2" species:9606 "Homo
            sapiens" [GO:0003690 "double-stranded DNA binding" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0000287
            "magnesium ion binding" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IC;IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
            membrane-bounded organelle" evidence=IDA] InterPro:IPR000253
            InterPro:IPR001766 InterPro:IPR008984 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF00498 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50006 PROSITE:PS50039 SMART:SM00240
            SMART:SM00339 GO:GO:0000287 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025
            GO:GO:0009888 HOGENOM:HOG000072588 HOVERGEN:HBG051649 KO:K09404
            EMBL:X60787 EMBL:U58196 EMBL:U58197 EMBL:U58198 EMBL:AC124287
            IPI:IPI00006029 IPI:IPI00220426 IPI:IPI00479612 PIR:A41285
            RefSeq:NP_004505.2 UniGene:Hs.591140 PDB:1JXS PDB:2C6Y PDBsum:1JXS
            PDBsum:2C6Y ProteinModelPortal:Q01167 SMR:Q01167 IntAct:Q01167
            STRING:Q01167 PhosphoSite:Q01167 DMDM:118572648 PaxDb:Q01167
            PRIDE:Q01167 Ensembl:ENST00000335255 Ensembl:ENST00000473637
            GeneID:3607 KEGG:hsa:3607 UCSC:uc002kfm.1 UCSC:uc002kfn.3
            UCSC:uc010diu.3 CTD:3607 GeneCards:GC17P080477 H-InvDB:HIX0014279
            HGNC:HGNC:6036 HPA:HPA027523 MIM:147685 neXtProt:NX_Q01167
            PharmGKB:PA29851 InParanoid:Q01167 OMA:HGQVNNA OrthoDB:EOG4XD3QX
            PhylomeDB:Q01167 ChiTaRS:FOXK2 EvolutionaryTrace:Q01167
            GenomeRNAi:3607 NextBio:14097 ArrayExpress:Q01167 Bgee:Q01167
            CleanEx:HS_FOXK2 Genevestigator:Q01167 GermOnline:ENSG00000141568
            Uniprot:Q01167
        Length = 660

 Score = 241 (89.9 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 45/74 (60%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AI+ AP  ++TLN IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   262 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 321

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   322 SQEEPGKGSFWRID 335


>UNIPROTKB|F1RX14 [details] [associations]
            symbol:FOXF2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060021 "palate development" evidence=IEA] [GO:0048806
            "genitalia development" evidence=IEA] [GO:0048596 "embryonic
            camera-type eye morphogenesis" evidence=IEA] [GO:0048566 "embryonic
            digestive tract development" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0042249 "establishment of planar
            polarity of embryonic epithelium" evidence=IEA] [GO:0030198
            "extracellular matrix organization" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0045892 GO:GO:0043565 GO:GO:0045944
            GO:GO:0030198 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0005667 GO:GO:0048806 GO:GO:0048566
            GO:GO:0060021 GO:GO:0042249 GeneTree:ENSGT00690000101636
            OMA:SPYIKQQ EMBL:CU012041 Ensembl:ENSSSCT00000001082 Uniprot:F1RX14
        Length = 399

 Score = 235 (87.8 bits), Expect = 2.2e-19, P = 2.2e-19
 Identities = 42/74 (56%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P  R+TL+EIYQF+   FP++R A  GWKNS+RHNLSLN+CF K+ +
Sbjct:    63 SYIALIVMAIQSSPAKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPK 122

Query:    75 PKDDPGKGSYWAID 88
                 PGKG YW ID
Sbjct:   123 GLGRPGKGHYWTID 136


>UNIPROTKB|P85037 [details] [associations]
            symbol:FOXK1 "Forkhead box protein K1" species:9606 "Homo
            sapiens" [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0030154 "cell differentiation" evidence=IEA] [GO:0030308
            "negative regulation of cell growth" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0000287 "magnesium ion binding" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339 GO:GO:0045892
            GO:GO:0045893 GO:GO:0030154 GO:GO:0005730 GO:GO:0030308
            GO:GO:0000287 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0007517 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 EMBL:AC092610 GO:GO:0051090
            eggNOG:COG5025 GO:GO:0009888 EMBL:AK122663 EMBL:AC072054
            EMBL:AC092428 EMBL:BC038434 EMBL:CB959941 EMBL:AW206906
            IPI:IPI00556645 IPI:IPI00807514 RefSeq:NP_001032242.1
            UniGene:Hs.487393 ProteinModelPortal:P85037 SMR:P85037
            IntAct:P85037 STRING:P85037 PhosphoSite:P85037 DMDM:118572324
            PaxDb:P85037 PeptideAtlas:P85037 PRIDE:P85037
            Ensembl:ENST00000328914 Ensembl:ENST00000446823 GeneID:221937
            KEGG:hsa:221937 UCSC:uc003sna.1 UCSC:uc003snc.1 CTD:221937
            GeneCards:GC07P004683 HGNC:HGNC:23480 HPA:HPA017998 HPA:HPA018864
            neXtProt:NX_P85037 PharmGKB:PA134978307 HOGENOM:HOG000072588
            HOVERGEN:HBG051649 InParanoid:P85037 KO:K09404 OMA:CEVGPKE
            ChiTaRS:FOXK1 GenomeRNAi:221937 NextBio:91504 ArrayExpress:P85037
            Bgee:P85037 CleanEx:HS_FOXK1 Genevestigator:P85037 Uniprot:P85037
        Length = 733

 Score = 232 (86.7 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
 Identities = 44/74 (59%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AIS+A   ++TL+ IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   309 SYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPR 368

Query:    75 PKDDPGKGSYWAID 88
              +++PGKGS+W ID
Sbjct:   369 SQEEPGKGSFWRID 382

 Score = 34 (17.0 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
 Identities = 10/48 (20%), Positives = 19/48 (39%)

Query:    90 NHTADDGPSKKKVKLPRVSPYSPVECXXXXXXXDVHNSKPPTSISSVP 137
             + +A   P+   +  PR       EC         H+ +  + ++SVP
Sbjct:   414 SRSAPASPTHPGLMSPRSGGLQTPECLSREGSPIPHDPEFGSKLASVP 461


>UNIPROTKB|P32315 [details] [associations]
            symbol:foxa1-b "Forkhead box protein A1-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            InterPro:IPR018533 Pfam:PF09354 HOVERGEN:HBG006621 KO:K09387
            EMBL:M93658 EMBL:BC047130 PIR:I51580 RefSeq:NP_001080063.1
            UniGene:Xl.52787 ProteinModelPortal:P32315 SMR:P32315 GeneID:379755
            KEGG:xla:379755 CTD:379755 Xenbase:XB-GENE-6256649 Uniprot:P32315
        Length = 427

 Score = 236 (88.1 bits), Expect = 2.3e-19, P = 2.3e-19
 Identities = 43/73 (58%), Positives = 52/73 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   FPYYR+    W+NSIRH+LS N CF KV+R
Sbjct:   161 SYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFIKVSR 220

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYW +
Sbjct:   221 SPDKPGKGSYWTL 233


>UNIPROTKB|Q4H3J2 [details] [associations]
            symbol:Ci-FoxD-a/b "Transcription factor protein"
            species:7719 "Ciona intestinalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0016477 "cell migration"
            evidence=IBA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0048484 "enteric
            nervous system development" evidence=IBA] [GO:0048485 "sympathetic
            nervous system development" evidence=IBA] [GO:0048846 "axon
            extension involved in axon guidance" evidence=IBA] [GO:0048937
            "lateral line nerve glial cell development" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0016477 GO:GO:0043565
            GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0048485
            GO:GO:0048484 GO:GO:0051090 GO:GO:0048846 eggNOG:COG5025
            GO:GO:0009888 GO:GO:0048937 EMBL:AB210430 RefSeq:NP_001071709.1
            UniGene:Cin.20900 ProteinModelPortal:Q4H3J2 SMR:Q4H3J2
            GeneID:778610 KEGG:cin:778610 CTD:778610 HOGENOM:HOG000169941
            HOVERGEN:HBG074430 InParanoid:Q4H3J2 Uniprot:Q4H3J2
        Length = 611

 Score = 226 (84.6 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
 Identities = 40/80 (50%), Positives = 55/80 (68%)

Query:     9 NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKC 68
             N+K   SY +LI ++I  +P  ++TL+ I  FI + FPYY+E    W+NSIRHNLSLN C
Sbjct:   206 NVKPPYSYIALITMSILQSPDKKLTLSGICDFIMNRFPYYKEKFPAWQNSIRHNLSLNDC 265

Query:    69 FTKVARPKDDPGKGSYWAID 88
             F K+ R   +PGKG+YW +D
Sbjct:   266 FVKIPREPGNPGKGNYWTMD 285

 Score = 37 (18.1 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query:    96 GPSKKKVKLPRVSPYS 111
             G  + K KLPR SP+S
Sbjct:   429 GQQQAK-KLPRNSPFS 443


>UNIPROTKB|Q9W707 [details] [associations]
            symbol:foxf1-b "Forkhead box protein F1-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=ISS;NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0008283 "cell proliferation" evidence=IMP]
            [GO:0030509 "BMP signaling pathway" evidence=IMP] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0048566 "embryonic digestive tract development" evidence=IMP]
            [GO:0048745 "smooth muscle tissue development" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0030154 GO:GO:0003677
            GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0030509 GO:GO:0048566
            GO:GO:0048745 HSSP:Q99958 KO:K09399 HOVERGEN:HBG051644
            EMBL:AJ242679 EMBL:BC108567 RefSeq:NP_001090140.1 UniGene:Xl.54939
            ProteinModelPortal:Q9W707 SMR:Q9W707 GeneID:735218 KEGG:xla:735218
            CTD:735218 Xenbase:XB-GENE-6254084 Uniprot:Q9W707
        Length = 372

 Score = 233 (87.1 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 41/74 (55%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P  R+TL+EIYQF+   FP++R +  GWKNS+RHNLSLN+CF K+ +
Sbjct:    58 SYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPK 117

Query:    75 PKDDPGKGSYWAID 88
                 PGKG YW ID
Sbjct:   118 GLGRPGKGHYWTID 131


>UNIPROTKB|Q28BS5 [details] [associations]
            symbol:foxf1 "Forkhead box protein F1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0003677 "DNA binding"
            evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
            [GO:0030509 "BMP signaling pathway" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0048566 "embryonic digestive tract development" evidence=ISS]
            [GO:0048745 "smooth muscle tissue development" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0030154 GO:GO:0003677
            GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0030509 GO:GO:0048566
            eggNOG:COG5025 GO:GO:0048745 CTD:2294 HOGENOM:HOG000060124
            KO:K09399 HOVERGEN:HBG051644 EMBL:CR942666 RefSeq:NP_001039226.1
            UniGene:Str.13214 HSSP:Q01167 ProteinModelPortal:Q28BS5 SMR:Q28BS5
            STRING:Q28BS5 GeneID:734087 KEGG:xtr:734087 Xenbase:XB-GENE-478922
            Uniprot:Q28BS5
        Length = 373

 Score = 233 (87.1 bits), Expect = 2.6e-19, P = 2.6e-19
 Identities = 41/74 (55%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P  R+TL+EIYQF+   FP++R +  GWKNS+RHNLSLN+CF K+ +
Sbjct:    58 SYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPK 117

Query:    75 PKDDPGKGSYWAID 88
                 PGKG YW ID
Sbjct:   118 GLGRPGKGHYWTID 131


>UNIPROTKB|Q9W706 [details] [associations]
            symbol:foxf1-a "Forkhead box protein F1-A" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=ISS;NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0008283 "cell proliferation" evidence=ISS]
            [GO:0030509 "BMP signaling pathway" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0048566 "embryonic digestive tract development" evidence=ISS]
            [GO:0048745 "smooth muscle tissue development" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0030154 GO:GO:0003677
            GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0030509 GO:GO:0048566
            GO:GO:0048745 HSSP:Q99958 KO:K09399 HOVERGEN:HBG051644
            EMBL:AJ242680 RefSeq:NP_001084262.1 UniGene:Xl.182
            ProteinModelPortal:Q9W706 SMR:Q9W706 GeneID:399398 KEGG:xla:399398
            CTD:399398 Xenbase:XB-GENE-865226 Uniprot:Q9W706
        Length = 373

 Score = 233 (87.1 bits), Expect = 2.6e-19, P = 2.6e-19
 Identities = 41/74 (55%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P  R+TL+EIYQF+   FP++R +  GWKNS+RHNLSLN+CF K+ +
Sbjct:    58 SYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPK 117

Query:    75 PKDDPGKGSYWAID 88
                 PGKG YW ID
Sbjct:   118 GLGRPGKGHYWTID 131


>UNIPROTKB|Q12947 [details] [associations]
            symbol:FOXF2 "Forkhead box protein F2" species:9606 "Homo
            sapiens" [GO:0030198 "extracellular matrix organization"
            evidence=IEA] [GO:0042249 "establishment of planar polarity of
            embryonic epithelium" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0048566 "embryonic digestive tract development" evidence=IEA]
            [GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008301 "DNA binding,
            bending" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IC;IDA] [GO:0001837 "epithelial to
            mesenchymal transition" evidence=NAS] [GO:0048806 "genitalia
            development" evidence=IMP] [GO:0060021 "palate development"
            evidence=IMP] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0008134
            "transcription factor binding" evidence=IPI] [GO:0005667
            "transcription factor complex" evidence=IDA] [GO:0003677 "DNA
            binding" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0045892 GO:GO:0043565 GO:GO:0045944 GO:GO:0030198
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0048806 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0048566 EMBL:CH471087 GO:GO:0060021 GO:GO:0007389
            GO:GO:0001837 GO:GO:0051090 GO:GO:0042249 eggNOG:COG5025
            HOGENOM:HOG000060124 KO:K09399 OrthoDB:EOG4BRWM4 HOVERGEN:HBG051644
            EMBL:AF084939 EMBL:AF084938 EMBL:AL034346 EMBL:U13220
            IPI:IPI00030319 PIR:S51625 PIR:T09474 RefSeq:NP_001443.1
            UniGene:Hs.484423 ProteinModelPortal:Q12947 SMR:Q12947
            IntAct:Q12947 STRING:Q12947 PhosphoSite:Q12947 DMDM:8247925
            PaxDb:Q12947 PRIDE:Q12947 DNASU:2295 Ensembl:ENST00000259806
            GeneID:2295 KEGG:hsa:2295 UCSC:uc003mtm.3 CTD:2295
            GeneCards:GC06P001390 HGNC:HGNC:3810 MIM:603250 neXtProt:NX_Q12947
            PharmGKB:PA28227 InParanoid:Q12947 OMA:SPYIKQQ PhylomeDB:Q12947
            GenomeRNAi:2295 NextBio:9315 Bgee:Q12947 CleanEx:HS_FOXF2
            Genevestigator:Q12947 GermOnline:ENSG00000137273 Uniprot:Q12947
        Length = 444

 Score = 236 (88.1 bits), Expect = 2.7e-19, P = 2.7e-19
 Identities = 42/74 (56%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P  R+TL+EIYQF+   FP++R A  GWKNS+RHNLSLN+CF K+ +
Sbjct:   104 SYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPK 163

Query:    75 PKDDPGKGSYWAID 88
                 PGKG YW ID
Sbjct:   164 GLGRPGKGHYWTID 177


>MGI|MGI:1347479 [details] [associations]
            symbol:Foxf2 "forkhead box F2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO;IDA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
            evidence=ISO;IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=ISO;IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0030198
            "extracellular matrix organization" evidence=IGI;IMP] [GO:0042249
            "establishment of planar polarity of embryonic epithelium"
            evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO;IBA] [GO:0048566 "embryonic digestive tract
            development" evidence=IGI] [GO:0048596 "embryonic camera-type eye
            morphogenesis" evidence=IMP] [GO:0048806 "genitalia development"
            evidence=ISO] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0060021
            "palate development" evidence=ISO] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1347479
            GO:GO:0043565 GO:GO:0045944 GO:GO:0030198 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0048806
            GO:GO:0000122 GO:GO:0008301 GO:GO:0003690 GO:GO:0048566
            GO:GO:0008134 GO:GO:0060021 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048596 GO:GO:0042249 eggNOG:COG5025 HSSP:Q99958
            GeneTree:ENSGT00690000101636 HOGENOM:HOG000060124 KO:K09399
            OrthoDB:EOG4BRWM4 HOVERGEN:HBG051644 CTD:2295 OMA:SPYIKQQ
            EMBL:Y12293 EMBL:Y12294 EMBL:Y11148 EMBL:AK132385 EMBL:BC137947
            EMBL:BC137949 IPI:IPI00117732 RefSeq:NP_034355.2 UniGene:Mm.125548
            ProteinModelPortal:O54743 SMR:O54743 STRING:O54743
            PhosphoSite:O54743 Ensembl:ENSMUST00000042054 GeneID:14238
            KEGG:mmu:14238 InParanoid:B2RQI5 NextBio:285531 Bgee:O54743
            CleanEx:MM_FOXF2 Genevestigator:O54743 Uniprot:O54743
        Length = 446

 Score = 236 (88.1 bits), Expect = 2.7e-19, P = 2.7e-19
 Identities = 42/74 (56%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P  R+TL+EIYQF+   FP++R A  GWKNS+RHNLSLN+CF K+ +
Sbjct:   104 SYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPK 163

Query:    75 PKDDPGKGSYWAID 88
                 PGKG YW ID
Sbjct:   164 GLGRPGKGHYWTID 177


>UNIPROTKB|F1PW06 [details] [associations]
            symbol:FOXF2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 OMA:SPYIKQQ EMBL:AAEX03017452
            EMBL:AAEX03017453 Ensembl:ENSCAFT00000014614 Uniprot:F1PW06
        Length = 449

 Score = 236 (88.1 bits), Expect = 2.8e-19, P = 2.8e-19
 Identities = 42/74 (56%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P  R+TL+EIYQF+   FP++R A  GWKNS+RHNLSLN+CF K+ +
Sbjct:   101 SYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPK 160

Query:    75 PKDDPGKGSYWAID 88
                 PGKG YW ID
Sbjct:   161 GLGRPGKGHYWTID 174


>UNIPROTKB|Q12946 [details] [associations]
            symbol:FOXF1 "Forkhead box protein F1" species:9606 "Homo
            sapiens" [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0002053
            "positive regulation of mesenchymal cell proliferation"
            evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0007368 "determination of left/right symmetry"
            evidence=IEA] [GO:0010811 "positive regulation of cell-substrate
            adhesion" evidence=IEA] [GO:0014822 "detection of wounding"
            evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
            [GO:0030198 "extracellular matrix organization" evidence=IEA]
            [GO:0030335 "positive regulation of cell migration" evidence=IEA]
            [GO:0043305 "negative regulation of mast cell degranulation"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0045198 "establishment of epithelial
            cell apical/basal polarity" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048286 "lung alveolus development" evidence=IEA]
            [GO:0048371 "lateral mesodermal cell differentiation" evidence=IEA]
            [GO:0048617 "embryonic foregut morphogenesis" evidence=IEA]
            [GO:0050728 "negative regulation of inflammatory response"
            evidence=IEA] [GO:0051145 "smooth muscle cell differentiation"
            evidence=IEA] [GO:0051150 "regulation of smooth muscle cell
            differentiation" evidence=IEA] [GO:0060438 "trachea development"
            evidence=IEA] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IEA] [GO:0060461 "right lung
            morphogenesis" evidence=IEA] [GO:0060463 "lung lobe morphogenesis"
            evidence=IEA] [GO:0061030 "epithelial cell differentiation involved
            in mammary gland alveolus development" evidence=IEA] [GO:0071345
            "cellular response to cytokine stimulus" evidence=IEA] [GO:0071407
            "cellular response to organic cyclic compound" evidence=IEA]
            [GO:0090131 "mesenchyme migration" evidence=IEA] [GO:0001763
            "morphogenesis of a branching structure" evidence=IMP] [GO:0030323
            "respiratory tube development" evidence=IMP] [GO:0001701 "in utero
            embryonic development" evidence=IMP] [GO:0060841 "venous blood
            vessel development" evidence=IMP] [GO:0001568 "blood vessel
            development" evidence=IMP] [GO:0030324 "lung development"
            evidence=IMP] [GO:0003214 "cardiac left ventricle morphogenesis"
            evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
            [GO:0060446 "branching involved in open tracheal system
            development" evidence=IMP] [GO:0048613 "embryonic ectodermal
            digestive tract morphogenesis" evidence=IMP] [GO:0048557 "embryonic
            digestive tract morphogenesis" evidence=IMP] [GO:0072001 "renal
            system development" evidence=IMP] [GO:0072189 "ureter development"
            evidence=IMP] [GO:0003197 "endocardial cushion development"
            evidence=IMP] [GO:0031016 "pancreas development" evidence=IMP]
            [GO:0007494 "midgut development" evidence=IMP] [GO:0048565
            "digestive tract development" evidence=IMP] [GO:0060426 "lung
            vasculature development" evidence=IMP] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISS] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IC] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0045893
            GO:GO:0050728 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
            GO:GO:0030198 Gene3D:1.10.10.10 InterPro:IPR011991
            Pathway_Interaction_DB:hnf3bpathway GO:GO:0005667 GO:GO:0003705
            GO:GO:0007494 GO:GO:0000122 GO:GO:0008301 GO:GO:0001756
            GO:GO:0044212 GO:GO:0048286 GO:GO:0003690 GO:GO:0016337
            GO:GO:0060841 GO:GO:0007368 GO:GO:0051145 GO:GO:0003197
            GO:GO:0030335 GO:GO:0001570 GO:GO:0010811 GO:GO:0008134
            GO:GO:0031016 GO:GO:0007389 GO:GO:0071407 GO:GO:0060438
            GO:GO:0007224 GO:GO:0051090 GO:GO:0048617 GO:GO:0002053
            GO:GO:0051150 GO:GO:0060441 GO:GO:0045198 GO:GO:0003214
            GO:GO:0060446 GO:GO:0071345 GO:GO:0043305 eggNOG:COG5025
            GO:GO:0060426 GO:GO:0060463 GO:GO:0061030 CTD:2294
            HOGENOM:HOG000060124 KO:K09399 OMA:MTAEVQQ OrthoDB:EOG4BRWM4
            EMBL:U13219 EMBL:AF085343 EMBL:AF085342 EMBL:AK314167 EMBL:AC009108
            EMBL:BC089442 IPI:IPI00871189 PIR:S51624 RefSeq:NP_001442.2
            UniGene:Hs.155591 ProteinModelPortal:Q12946 SMR:Q12946
            STRING:Q12946 PhosphoSite:Q12946 DMDM:238054293 PaxDb:Q12946
            PRIDE:Q12946 DNASU:2294 Ensembl:ENST00000262426 GeneID:2294
            KEGG:hsa:2294 UCSC:uc002fjl.3 GeneCards:GC16P086544 HGNC:HGNC:3809
            HPA:HPA028886 MIM:265380 MIM:601089 neXtProt:NX_Q12946
            Orphanet:210122 PharmGKB:PA28226 HOVERGEN:HBG051644
            InParanoid:Q12946 GenomeRNAi:2294 NextBio:9311 Bgee:Q12946
            CleanEx:HS_FOXF1 Genevestigator:Q12946 GermOnline:ENSG00000103241
            GO:GO:0014822 GO:GO:0048613 GO:GO:0048371 GO:GO:0090131
            GO:GO:0060461 GO:GO:0072189 Uniprot:Q12946
        Length = 379

 Score = 233 (87.1 bits), Expect = 2.8e-19, P = 2.8e-19
 Identities = 41/74 (55%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P  R+TL+EIYQF+   FP++R +  GWKNS+RHNLSLN+CF K+ +
Sbjct:    52 SYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPK 111

Query:    75 PKDDPGKGSYWAID 88
                 PGKG YW ID
Sbjct:   112 GLGRPGKGHYWTID 125


>ZFIN|ZDB-GENE-050419-153 [details] [associations]
            symbol:foxf1 "forkhead box F1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-050419-153 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 eggNOG:COG5025
            GeneTree:ENSGT00690000101636 EMBL:BX571798 EMBL:BC129194
            IPI:IPI00487605 RefSeq:NP_001073655.1 UniGene:Dr.89399
            ProteinModelPortal:A1L1S5 SMR:A1L1S5 STRING:A1L1S5
            Ensembl:ENSDART00000012374 GeneID:566407 KEGG:dre:566407 CTD:2294
            HOGENOM:HOG000060124 InParanoid:A1L1S5 KO:K09399 OMA:MTAEVQQ
            OrthoDB:EOG4BRWM4 NextBio:20888166 Bgee:A1L1S5 Uniprot:A1L1S5
        Length = 380

 Score = 233 (87.1 bits), Expect = 2.9e-19, P = 2.9e-19
 Identities = 41/74 (55%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P  R+TL+EIYQF+   FP++R +  GWKNS+RHNLSLN+CF K+ +
Sbjct:    56 SYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPK 115

Query:    75 PKDDPGKGSYWAID 88
                 PGKG YW ID
Sbjct:   116 GLGRPGKGHYWTID 129


>ZFIN|ZDB-GENE-041001-130 [details] [associations]
            symbol:foxf2b "forkhead box F2b" species:7955
            "Danio rerio" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-041001-130 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 EMBL:BX510653 IPI:IPI00636707
            RefSeq:XP_003200754.1 Ensembl:ENSDART00000103232 GeneID:100002904
            KEGG:dre:100002904 NextBio:20785637 Uniprot:E7FER3
        Length = 429

 Score = 235 (87.8 bits), Expect = 3.0e-19, P = 3.0e-19
 Identities = 42/74 (56%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI +AP  R+TL+EIYQF+   FP++R +  GWKNS+RHNLSLN+CF K+ +
Sbjct:   115 SYIALIVMAIQSAPTKRLTLSEIYQFLQTRFPFFRGSYQGWKNSVRHNLSLNECFIKLPK 174

Query:    75 PKDDPGKGSYWAID 88
                 PGKG YW ID
Sbjct:   175 GLGRPGKGHYWTID 188


>UNIPROTKB|C1K2Y2 [details] [associations]
            symbol:Ola.4950 "Forkhead box B1.2" species:8090 "Oryzias
            latipes" [GO:0001756 "somitogenesis" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0007412 "axon target recognition"
            evidence=ISS] [GO:0008542 "visual learning" evidence=ISS]
            [GO:0021767 "mammillary body development" evidence=ISS] [GO:0021855
            "hypothalamus cell migration" evidence=ISS] [GO:0022029
            "telencephalon cell migration" evidence=ISS] [GO:0030901 "midbrain
            development" evidence=ISS] [GO:0033504 "floor plate development"
            evidence=ISS] [GO:0043524 "negative regulation of neuron apoptotic
            process" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0061374 "mammillothalamic axonal tract
            development" evidence=ISS] [GO:0061379 "inferior colliculus
            development" evidence=ISS] [GO:0061381 "cell migration in
            diencephalon" evidence=ISS] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0043565
            GO:GO:0008542 GO:GO:0043524 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0001756 GO:GO:0007412
            GO:GO:0033504 eggNOG:COG5025 GO:GO:0022029
            GeneTree:ENSGT00700000104135 OMA:AREYKVP OrthoDB:EOG40GCRF
            GO:GO:0061381 GO:GO:0021855 GO:GO:0061379 GO:GO:0061374
            EMBL:FJ792650 RefSeq:NP_001153921.1 UniGene:Ola.4950
            Ensembl:ENSORLT00000009495 GeneID:100301603 Uniprot:C1K2Y2
        Length = 313

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 41/76 (53%), Positives = 52/76 (68%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SL  +AI + P+  + L+EIY+FI   FPYYRE    W+NS+RHNLS N CF K+ R
Sbjct:    17 SYISLTAMAIQSCPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPR 76

Query:    75 PKDDPGKGSYWAIDYN 90
               D PGKGS+WA+  N
Sbjct:    77 RPDQPGKGSFWALHPN 92


>UNIPROTKB|Q9DEN3 [details] [associations]
            symbol:foxd3-b "Forkhead box protein D3-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0014034 "neural crest cell fate commitment" evidence=ISS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0050768 "negative regulation of neurogenesis"
            evidence=IMP] [GO:0050769 "positive regulation of neurogenesis"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045892 GO:GO:0003677
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0050769 GO:GO:0050768 KO:K09397 HSSP:Q63245
            GO:GO:0014034 HOVERGEN:HBG051641 EMBL:AJ298866 EMBL:BC072772
            RefSeq:NP_001079078.1 UniGene:Xl.523 ProteinModelPortal:Q9DEN3
            SMR:Q9DEN3 GeneID:373610 KEGG:xla:373610 CTD:373610
            Xenbase:XB-GENE-6252892 Uniprot:Q9DEN3
        Length = 371

 Score = 232 (86.7 bits), Expect = 3.2e-19, P = 3.2e-19
 Identities = 42/83 (50%), Positives = 57/83 (68%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             K   +K   SY +LI ++I  +PQ ++TL+ I +FI+  FPYYRE    W+NSIRHNLSL
Sbjct:    89 KNSVVKPPYSYIALITMSILQSPQKKLTLSGICEFISSRFPYYREKFPAWQNSIRHNLSL 148

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             N CF K+ R   +PGKG+YW +D
Sbjct:   149 NDCFIKIPREPGNPGKGNYWTLD 171


>UNIPROTKB|F1N694 [details] [associations]
            symbol:LOC529218 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0060021 "palate development" evidence=IEA]
            [GO:0048806 "genitalia development" evidence=IEA] [GO:0048596
            "embryonic camera-type eye morphogenesis" evidence=IEA] [GO:0048566
            "embryonic digestive tract development" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042249
            "establishment of planar polarity of embryonic epithelium"
            evidence=IEA] [GO:0030198 "extracellular matrix organization"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0045892 GO:GO:0043565
            GO:GO:0045944 GO:GO:0030198 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0005667 GO:GO:0048806
            GO:GO:0048566 GO:GO:0060021 GO:GO:0042249
            GeneTree:ENSGT00690000101636 KO:K09399 OMA:SPYIKQQ
            EMBL:DAAA02055925 IPI:IPI00842377 RefSeq:XP_003587799.1
            Ensembl:ENSBTAT00000042722 GeneID:529218 KEGG:bta:529218
            Uniprot:F1N694
        Length = 351

 Score = 230 (86.0 bits), Expect = 3.7e-19, P = 3.7e-19
 Identities = 41/74 (55%), Positives = 54/74 (72%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P  R+TL+EIY F+   FP++R A  GWKNS+RHNLSLN+CF K+ +
Sbjct:     4 SYIALIVMAIQSSPAKRLTLSEIYHFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPK 63

Query:    75 PKDDPGKGSYWAID 88
                 PGKG YW ID
Sbjct:    64 GLGRPGKGHYWTID 77


>UNIPROTKB|F1NUD0 [details] [associations]
            symbol:F1NUD0 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0001568 "blood
            vessel development" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0040018 "positive regulation of multicellular
            organism growth" evidence=IEA] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0050885 "neuromuscular process
            controlling balance" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0045892 GO:GO:0043565 GO:GO:0040018 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0043433
            GeneTree:ENSGT00690000101636 OMA:KEPWVAG EMBL:AADN02019090
            IPI:IPI00572257 Ensembl:ENSGALT00000039343 Uniprot:F1NUD0
        Length = 344

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 40/74 (54%), Positives = 54/74 (72%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI + P+ R+TL+ IY++I   F +YR+   GW+NSIRHNLSLN+CF KV R
Sbjct:    21 SYIALITMAIQSTPEKRITLSGIYRYIMGRFTFYRDNKQGWQNSIRHNLSLNECFVKVPR 80

Query:    75 PKDDPGKGSYWAID 88
                 PGKG+YW +D
Sbjct:    81 DDKKPGKGNYWTLD 94


>UNIPROTKB|E1B7H0 [details] [associations]
            symbol:FOXB1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0061381 "cell migration in diencephalon" evidence=ISS]
            [GO:0061379 "inferior colliculus development" evidence=ISS]
            [GO:0061377 "mammary gland lobule development" evidence=ISS]
            [GO:0061374 "mammillothalamic axonal tract development"
            evidence=ISS] [GO:0021767 "mammillary body development"
            evidence=ISS] [GO:0008542 "visual learning" evidence=ISS]
            [GO:0022029 "telencephalon cell migration" evidence=ISS]
            [GO:0001756 "somitogenesis" evidence=ISS] [GO:0033504 "floor plate
            development" evidence=ISS] [GO:0021855 "hypothalamus cell
            migration" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0061030 "epithelial cell differentiation involved in mammary
            gland alveolus development" evidence=ISS] [GO:0043524 "negative
            regulation of neuron apoptotic process" evidence=ISS] [GO:0030901
            "midbrain development" evidence=ISS] [GO:0007595 "lactation"
            evidence=ISS] [GO:0007412 "axon target recognition" evidence=ISS]
            [GO:0021794 "thalamus development" evidence=IEA] [GO:0021510
            "spinal cord development" evidence=IEA] [GO:0001655 "urogenital
            system development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0008542 GO:GO:0043524
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0001756 GO:GO:0001655 GO:GO:0021510 GO:GO:0007595
            GO:GO:0007412 GO:GO:0033504 GO:GO:0021794 GO:GO:0022029
            GeneTree:ENSGT00700000104135 CTD:27023 KO:K09395 OMA:AREYKVP
            GO:GO:0061381 GO:GO:0061030 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 EMBL:DAAA02028794 IPI:IPI00686566
            RefSeq:XP_002690896.1 RefSeq:XP_585450.1 Ensembl:ENSBTAT00000025445
            GeneID:539181 KEGG:bta:539181 NextBio:20877831 Uniprot:E1B7H0
        Length = 325

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 40/73 (54%), Positives = 52/73 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SL  +AI ++P+  + L+EIY+FI   FPYYRE    W+NS+RHNLS N CF K+ R
Sbjct:    17 SYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPR 76

Query:    75 PKDDPGKGSYWAI 87
               D PGKGS+WA+
Sbjct:    77 RPDQPGKGSFWAL 89


>UNIPROTKB|F1MFD4 [details] [associations]
            symbol:FOXS1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0050885 "neuromuscular process controlling balance"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0040018 "positive regulation of multicellular
            organism growth" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0001568 "blood vessel development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
            GO:GO:0050885 GO:GO:0040018 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0043433 GO:GO:0001568
            GeneTree:ENSGT00690000101636 OMA:KEPWVAG EMBL:DAAA02036394
            IPI:IPI00687948 UniGene:Bt.24663 Ensembl:ENSBTAT00000012128
            Uniprot:F1MFD4
        Length = 330

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 42/74 (56%), Positives = 52/74 (70%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI N+P  R TL+ IY++I   F +YR    GW+NSIRHNLSLN+CF KV R
Sbjct:    22 SYIALIAMAIQNSPGQRATLSGIYRYIMGRFAFYRHNRPGWQNSIRHNLSLNECFVKVPR 81

Query:    75 PKDDPGKGSYWAID 88
                 PGKGSYW +D
Sbjct:    82 DDRKPGKGSYWTLD 95


>UNIPROTKB|E2R277 [details] [associations]
            symbol:FOXB1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 CTD:27023 KO:K09395 OMA:AREYKVP
            EMBL:AAEX03016181 RefSeq:XP_003433969.1 ProteinModelPortal:E2R277
            Ensembl:ENSCAFT00000039029 GeneID:100685913 KEGG:cfa:100685913
            Uniprot:E2R277
        Length = 325

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 40/73 (54%), Positives = 52/73 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SL  +AI ++P+  + L+EIY+FI   FPYYRE    W+NS+RHNLS N CF K+ R
Sbjct:    17 SYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPR 76

Query:    75 PKDDPGKGSYWAI 87
               D PGKGS+WA+
Sbjct:    77 RPDQPGKGSFWAL 89


>UNIPROTKB|F1P6E0 [details] [associations]
            symbol:FOXE3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 OMA:FPYAPFP EMBL:AAEX03009757
            EMBL:AAEX03009758 Ensembl:ENSCAFT00000006444 Uniprot:F1P6E0
        Length = 278

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 46/102 (45%), Positives = 67/102 (65%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +A+++AP  R+TL  IY+FIT  F +YR++   W+NSIRHNL+LN CF KV R
Sbjct:    28 SYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRHNLTLNDCFVKVPR 87

Query:    75 PKDDPGKGSYWAIDYNHTAD--DGPS--KKKVKLPRVSPYSP 112
                +PGKG+YW +D    AD  +  S  +++ +  R  P +P
Sbjct:    88 EPGNPGKGNYWTLD-PAAADMFENGSFLRRRKRFKRADPPAP 128


>UNIPROTKB|Q99853 [details] [associations]
            symbol:FOXB1 "Forkhead box protein B1" species:9606 "Homo
            sapiens" [GO:0001655 "urogenital system development" evidence=IEA]
            [GO:0021510 "spinal cord development" evidence=IEA] [GO:0021794
            "thalamus development" evidence=IEA] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007420 "brain development" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0007412
            "axon target recognition" evidence=ISS] [GO:0007595 "lactation"
            evidence=ISS] [GO:0030901 "midbrain development" evidence=ISS]
            [GO:0043524 "negative regulation of neuron apoptotic process"
            evidence=ISS] [GO:0061030 "epithelial cell differentiation involved
            in mammary gland alveolus development" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0021855 "hypothalamus cell migration"
            evidence=ISS] [GO:0033504 "floor plate development" evidence=ISS]
            [GO:0001756 "somitogenesis" evidence=ISS] [GO:0022029
            "telencephalon cell migration" evidence=ISS] [GO:0008542 "visual
            learning" evidence=ISS] [GO:0021767 "mammillary body development"
            evidence=ISS] [GO:0061374 "mammillothalamic axonal tract
            development" evidence=ISS] [GO:0061377 "mammary gland lobule
            development" evidence=ISS] [GO:0061379 "inferior colliculus
            development" evidence=ISS] [GO:0061381 "cell migration in
            diencephalon" evidence=ISS] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 EMBL:AF071554 GO:GO:0043565
            GO:GO:0008542 GO:GO:0043524 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0001756
            GO:GO:0001655 GO:GO:0003690 GO:GO:0008134 GO:GO:0021510
            EMBL:CH471082 GO:GO:0007595 GO:GO:0051090 GO:GO:0007412
            GO:GO:0033504 GO:GO:0021794 eggNOG:COG5025 GO:GO:0022029
            EMBL:AF055080 EMBL:AK290944 EMBL:BC113710 EMBL:U87393
            IPI:IPI00018495 RefSeq:NP_036314.2 UniGene:Hs.734475
            ProteinModelPortal:Q99853 SMR:Q99853 IntAct:Q99853 STRING:Q99853
            PhosphoSite:Q99853 DMDM:215274160 PRIDE:Q99853
            Ensembl:ENST00000396057 GeneID:27023 KEGG:hsa:27023 UCSC:uc002agj.1
            CTD:27023 GeneCards:GC15P060296 HGNC:HGNC:3799 neXtProt:NX_Q99853
            PharmGKB:PA28216 HOGENOM:HOG000007545 HOVERGEN:HBG102104
            InParanoid:Q99853 KO:K09395 OMA:AREYKVP OrthoDB:EOG40GCRF
            PhylomeDB:Q99853 GenomeRNAi:27023 NextBio:49554 Bgee:Q99853
            CleanEx:HS_FOXB1 Genevestigator:Q99853 GermOnline:ENSG00000171956
            GO:GO:0061381 GO:GO:0061030 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 Uniprot:Q99853
        Length = 325

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 40/73 (54%), Positives = 52/73 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SL  +AI ++P+  + L+EIY+FI   FPYYRE    W+NS+RHNLS N CF K+ R
Sbjct:    17 SYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPR 76

Query:    75 PKDDPGKGSYWAI 87
               D PGKGS+WA+
Sbjct:    77 RPDQPGKGSFWAL 89


>UNIPROTKB|D2HLR1 [details] [associations]
            symbol:FOXB1 "Uncharacterized protein" species:9646
            "Ailuropoda melanoleuca" [GO:0001756 "somitogenesis" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0007412 "axon target
            recognition" evidence=ISS] [GO:0007595 "lactation" evidence=ISS]
            [GO:0008542 "visual learning" evidence=ISS] [GO:0021767 "mammillary
            body development" evidence=ISS] [GO:0021855 "hypothalamus cell
            migration" evidence=ISS] [GO:0022029 "telencephalon cell migration"
            evidence=ISS] [GO:0030901 "midbrain development" evidence=ISS]
            [GO:0033504 "floor plate development" evidence=ISS] [GO:0043524
            "negative regulation of neuron apoptotic process" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0061030 "epithelial cell differentiation involved in mammary
            gland alveolus development" evidence=ISS] [GO:0061374
            "mammillothalamic axonal tract development" evidence=ISS]
            [GO:0061377 "mammary gland lobule development" evidence=ISS]
            [GO:0061379 "inferior colliculus development" evidence=ISS]
            [GO:0061381 "cell migration in diencephalon" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0008542 GO:GO:0043524
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0001756 GO:GO:0001655 GO:GO:0021510 GO:GO:0007595
            GO:GO:0007412 GO:GO:0033504 GO:GO:0021794 GO:GO:0022029
            GeneTree:ENSGT00700000104135 HOGENOM:HOG000007545 KO:K09395
            OMA:AREYKVP GO:GO:0061381 GO:GO:0061030 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 EMBL:ACTA01179549 EMBL:GL193015 RefSeq:XP_002923327.1
            ProteinModelPortal:D2HLR1 Ensembl:ENSAMET00000021309
            GeneID:100475733 KEGG:aml:100475733 Uniprot:D2HLR1
        Length = 325

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 40/73 (54%), Positives = 52/73 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SL  +AI ++P+  + L+EIY+FI   FPYYRE    W+NS+RHNLS N CF K+ R
Sbjct:    17 SYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPR 76

Query:    75 PKDDPGKGSYWAI 87
               D PGKGS+WA+
Sbjct:    77 RPDQPGKGSFWAL 89


>MGI|MGI:1927549 [details] [associations]
            symbol:Foxb1 "forkhead box B1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001756 "somitogenesis"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007412 "axon target recognition" evidence=IMP] [GO:0007595
            "lactation" evidence=IMP] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0008542 "visual learning" evidence=IMP]
            [GO:0021767 "mammillary body development" evidence=IMP] [GO:0021855
            "hypothalamus cell migration" evidence=IMP] [GO:0022029
            "telencephalon cell migration" evidence=IMP] [GO:0030901 "midbrain
            development" evidence=IMP] [GO:0033504 "floor plate development"
            evidence=IMP] [GO:0043524 "negative regulation of neuron apoptotic
            process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0061030
            "epithelial cell differentiation involved in mammary gland alveolus
            development" evidence=IMP] [GO:0061374 "mammillothalamic axonal
            tract development" evidence=IMP] [GO:0061377 "mammary gland lobule
            development" evidence=IMP] [GO:0061379 "inferior colliculus
            development" evidence=IMP] [GO:0061381 "cell migration in
            diencephalon" evidence=IMP] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 EMBL:U90538 MGI:MGI:1927549
            GO:GO:0043565 GO:GO:0008542 GO:GO:0043524 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
            GO:GO:0008301 GO:GO:0001756 GO:GO:0001655 GO:GO:0003690
            GO:GO:0008134 GO:GO:0021510 GO:GO:0007595 GO:GO:0051090
            GO:GO:0007412 GO:GO:0033504 GO:GO:0021794 eggNOG:COG5025
            GO:GO:0022029 GeneTree:ENSGT00700000104135 CTD:27023
            HOGENOM:HOG000007545 HOVERGEN:HBG102104 KO:K09395 OMA:AREYKVP
            OrthoDB:EOG40GCRF GO:GO:0061381 GO:GO:0061030 GO:GO:0021855
            GO:GO:0061379 GO:GO:0061374 EMBL:X92592 EMBL:BC111908 EMBL:U04198
            EMBL:X71943 IPI:IPI00138059 PIR:E47746 RefSeq:NP_071773.2
            UniGene:Mm.440890 ProteinModelPortal:Q64732 SMR:Q64732
            PhosphoSite:Q64732 PRIDE:Q64732 Ensembl:ENSMUST00000071281
            GeneID:64290 KEGG:mmu:64290 UCSC:uc012gwj.1 InParanoid:Q2M2M4
            NextBio:319993 Bgee:Q64732 CleanEx:MM_FOXB1 Genevestigator:Q64732
            GermOnline:ENSMUSG00000059246 Uniprot:Q64732
        Length = 325

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 40/73 (54%), Positives = 52/73 (71%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SL  +AI ++P+  + L+EIY+FI   FPYYRE    W+NS+RHNLS N CF K+ R
Sbjct:    17 SYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPR 76

Query:    75 PKDDPGKGSYWAI 87
               D PGKGS+WA+
Sbjct:    77 RPDQPGKGSFWAL 89


>ZFIN|ZDB-GENE-980605-4 [details] [associations]
            symbol:foxd5 "forkhead box D5" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0001755 "neural crest cell migration" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0048846 "axon
            extension involved in axon guidance" evidence=IBA] [GO:0050935
            "iridophore differentiation" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0001822 "kidney development" evidence=IBA]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0048485 "sympathetic nervous system development"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0048484 "enteric nervous system development" evidence=IBA]
            [GO:0051216 "cartilage development" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0032525
            "somite rostral/caudal axis specification" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-980605-4 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0001822 GO:GO:0003690
            GO:GO:0051216 GO:GO:0008134 GO:GO:0001658 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0048846
            GO:GO:0032525 GO:GO:0048937 HOVERGEN:HBG051641 GO:GO:0050935
            EMBL:BC097095 IPI:IPI00481008 UniGene:Dr.75818
            ProteinModelPortal:Q4QRE5 SMR:Q4QRE5 STRING:Q4QRE5
            InParanoid:Q4QRE5 ArrayExpress:Q4QRE5 Uniprot:Q4QRE5
        Length = 321

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 40/83 (48%), Positives = 59/83 (71%)

Query:     6 KTGNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSL 65
             ++ ++K   SY +LI +AI  +P  ++TL+ I  FI++ FPYY+E    W+NSIRHNLSL
Sbjct:    68 QSSSVKPPYSYIALITMAILQSPMKKLTLSGICDFISNKFPYYKEKFPAWQNSIRHNLSL 127

Query:    66 NKCFTKVARPKDDPGKGSYWAID 88
             N CF K+ R   +PGKG+YW++D
Sbjct:   128 NDCFIKIPREPGNPGKGNYWSLD 150


>UNIPROTKB|F1MBH4 [details] [associations]
            symbol:FOXF1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090131 "mesenchyme migration" evidence=IEA]
            [GO:0072189 "ureter development" evidence=IEA] [GO:0071407
            "cellular response to organic cyclic compound" evidence=IEA]
            [GO:0071345 "cellular response to cytokine stimulus" evidence=IEA]
            [GO:0061030 "epithelial cell differentiation involved in mammary
            gland alveolus development" evidence=IEA] [GO:0060841 "venous blood
            vessel development" evidence=IEA] [GO:0060463 "lung lobe
            morphogenesis" evidence=IEA] [GO:0060461 "right lung morphogenesis"
            evidence=IEA] [GO:0060446 "branching involved in open tracheal
            system development" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0060438
            "trachea development" evidence=IEA] [GO:0060426 "lung vasculature
            development" evidence=IEA] [GO:0051150 "regulation of smooth muscle
            cell differentiation" evidence=IEA] [GO:0051145 "smooth muscle cell
            differentiation" evidence=IEA] [GO:0050728 "negative regulation of
            inflammatory response" evidence=IEA] [GO:0048617 "embryonic foregut
            morphogenesis" evidence=IEA] [GO:0048613 "embryonic ectodermal
            digestive tract morphogenesis" evidence=IEA] [GO:0048371 "lateral
            mesodermal cell differentiation" evidence=IEA] [GO:0048286 "lung
            alveolus development" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045198 "establishment of epithelial cell
            apical/basal polarity" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043305 "negative
            regulation of mast cell degranulation" evidence=IEA] [GO:0031016
            "pancreas development" evidence=IEA] [GO:0030335 "positive
            regulation of cell migration" evidence=IEA] [GO:0030198
            "extracellular matrix organization" evidence=IEA] [GO:0016337
            "cell-cell adhesion" evidence=IEA] [GO:0014822 "detection of
            wounding" evidence=IEA] [GO:0010811 "positive regulation of
            cell-substrate adhesion" evidence=IEA] [GO:0007494 "midgut
            development" evidence=IEA] [GO:0007368 "determination of left/right
            symmetry" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003214
            "cardiac left ventricle morphogenesis" evidence=IEA] [GO:0003197
            "endocardial cushion development" evidence=IEA] [GO:0002053
            "positive regulation of mesenchymal cell proliferation"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001701
            "in utero embryonic development" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0050728
            GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0030198
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0007494 GO:GO:0000122 GO:GO:0001756 GO:GO:0044212
            GO:GO:0048286 GO:GO:0016337 GO:GO:0060841 GO:GO:0007368
            GO:GO:0051145 GO:GO:0003197 GO:GO:0030335 GO:GO:0001570
            GO:GO:0010811 GO:GO:0031016 GO:GO:0071407 GO:GO:0060438
            GO:GO:0007224 GO:GO:0048617 GO:GO:0002053 GO:GO:0051150
            GO:GO:0060441 GO:GO:0045198 GO:GO:0003214 GO:GO:0060446
            GO:GO:0071345 GO:GO:0043305 GO:GO:0060426
            GeneTree:ENSGT00690000101636 GO:GO:0060463 GO:GO:0061030
            OMA:MTAEVQQ GO:GO:0014822 GO:GO:0048613 GO:GO:0048371 GO:GO:0090131
            GO:GO:0060461 GO:GO:0072189 EMBL:DAAA02046218 IPI:IPI00692837
            Ensembl:ENSBTAT00000000009 Uniprot:F1MBH4
        Length = 415

 Score = 233 (87.1 bits), Expect = 4.5e-19, P = 4.5e-19
 Identities = 41/74 (55%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++P  R+TL+EIYQF+   FP++R +  GWKNS+RHNLSLN+CF K+ +
Sbjct:    88 SYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPK 147

Query:    75 PKDDPGKGSYWAID 88
                 PGKG YW ID
Sbjct:   148 GLGRPGKGHYWTID 161


>UNIPROTKB|Q13461 [details] [associations]
            symbol:FOXE3 "Forkhead box protein E3" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IDA;TAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0007275 "multicellular organismal development" evidence=NAS]
            [GO:0002089 "lens morphogenesis in camera-type eye" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0006590 "thyroid
            hormone generation" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007422 "peripheral
            nervous system development" evidence=IRD] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0016477 "cell migration"
            evidence=IBA] [GO:0030878 "thyroid gland development" evidence=IBA]
            [GO:0031069 "hair follicle morphogenesis" evidence=IBA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0048484 "enteric nervous system
            development" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IRD] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IBA] [GO:0048846 "axon extension involved
            in axon guidance" evidence=IRD] [GO:0048937 "lateral line nerve
            glial cell development" evidence=IRD] [GO:0050679 "positive
            regulation of epithelial cell proliferation" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0060022 "hard
            palate development" evidence=IBA] [GO:0060023 "soft palate
            development" evidence=IBA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=NAS] [GO:0005667
            "transcription factor complex" evidence=IDA] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0016477 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0048468
            GO:GO:0048484 GO:GO:0051090 GO:GO:0031069 GO:GO:0050679
            GO:GO:0006590 GO:GO:0002089 GO:GO:0060023 eggNOG:COG5025
            GO:GO:0060022 GO:GO:0030878 EMBL:AL607122 HOGENOM:HOG000231286
            HOVERGEN:HBG051642 KO:K09398 GO:GO:0048562 EMBL:AF275722
            EMBL:U42990 IPI:IPI00013354 PIR:G02311 RefSeq:NP_036318.1
            UniGene:Hs.112968 ProteinModelPortal:Q13461 SMR:Q13461
            STRING:Q13461 PhosphoSite:Q13461 DMDM:12644406 PRIDE:Q13461
            DNASU:2301 Ensembl:ENST00000335071 GeneID:2301 KEGG:hsa:2301
            UCSC:uc001crk.3 CTD:2301 GeneCards:GC01P047881 HGNC:HGNC:3808
            MIM:107250 MIM:601094 MIM:610256 neXtProt:NX_Q13461 Orphanet:83461
            Orphanet:88632 PharmGKB:PA28225 InParanoid:Q13461 OMA:FPYAPFP
            OrthoDB:EOG4001JR PhylomeDB:Q13461 GenomeRNAi:2301 NextBio:9341
            Bgee:Q13461 CleanEx:HS_FOXE3 Genevestigator:Q13461
            GermOnline:ENSG00000186790 Uniprot:Q13461
        Length = 319

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 40/74 (54%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +A+++AP  R+TL  IY+FIT  F +YR++   W+NSIRHNL+LN CF KV R
Sbjct:    75 SYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRHNLTLNDCFVKVPR 134

Query:    75 PKDDPGKGSYWAID 88
                +PGKG+YW +D
Sbjct:   135 EPGNPGKGNYWTLD 148


>UNIPROTKB|F1S6E0 [details] [associations]
            symbol:FOXE3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0050679 "positive regulation of epithelial cell
            proliferation" evidence=IEA] [GO:0048468 "cell development"
            evidence=IEA] [GO:0043010 "camera-type eye development"
            evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0043010 GO:GO:0006366 GO:GO:0048468 GO:GO:0050679
            GeneTree:ENSGT00700000104135 OMA:FPYAPFP EMBL:CU694906
            Ensembl:ENSSSCT00000004296 Uniprot:F1S6E0
        Length = 324

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 40/74 (54%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +A+++AP  R+TL  IY+FIT  F +YR++   W+NSIRHNL+LN CF KV R
Sbjct:    75 SYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRHNLTLNDCFVKVPR 134

Query:    75 PKDDPGKGSYWAID 88
                +PGKG+YW +D
Sbjct:   135 EPGNPGKGNYWTLD 148


>UNIPROTKB|Q4SM19 [details] [associations]
            symbol:FOXB1 "Uncharacterized protein" species:99883
            "Tetraodon nigroviridis" [GO:0001756 "somitogenesis" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0007412 "axon target
            recognition" evidence=ISS] [GO:0008542 "visual learning"
            evidence=ISS] [GO:0021767 "mammillary body development"
            evidence=ISS] [GO:0021855 "hypothalamus cell migration"
            evidence=ISS] [GO:0022029 "telencephalon cell migration"
            evidence=ISS] [GO:0030901 "midbrain development" evidence=ISS]
            [GO:0033504 "floor plate development" evidence=ISS] [GO:0043524
            "negative regulation of neuron apoptotic process" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0061374 "mammillothalamic axonal tract development"
            evidence=ISS] [GO:0061379 "inferior colliculus development"
            evidence=ISS] [GO:0061381 "cell migration in diencephalon"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0008542
            GO:GO:0043524 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0001756 GO:GO:0007412 GO:GO:0033504
            GO:GO:0022029 GeneTree:ENSGT00700000104135 OMA:AREYKVP
            OrthoDB:EOG40GCRF GO:GO:0061381 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 HOVERGEN:HBG051642 EMBL:CAAE01014555
            Ensembl:ENSTNIT00000011410 Uniprot:Q4SM19
        Length = 313

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 40/73 (54%), Positives = 51/73 (69%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SL  +AI + P+  + L+EIY+FI   FPYYRE    W+NS+RHNLS N CF K+ R
Sbjct:    17 SYISLTAMAIQSCPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPR 76

Query:    75 PKDDPGKGSYWAI 87
               D PGKGS+WA+
Sbjct:    77 RPDQPGKGSFWAL 89


>MGI|MGI:1353569 [details] [associations]
            symbol:Foxe3 "forkhead box E3" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001654 "eye development"
            evidence=IMP] [GO:0002089 "lens morphogenesis in camera-type eye"
            evidence=IBA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=ISO;IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0006590 "thyroid hormone generation"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0016477 "cell migration" evidence=IBA] [GO:0030878 "thyroid
            gland development" evidence=IBA] [GO:0031069 "hair follicle
            morphogenesis" evidence=IBA] [GO:0043010 "camera-type eye
            development" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048468 "cell development" evidence=IMP] [GO:0048484 "enteric
            nervous system development" evidence=IBA] [GO:0048562 "embryonic
            organ morphogenesis" evidence=IBA] [GO:0050679 "positive regulation
            of epithelial cell proliferation" evidence=IMP] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0060022 "hard palate development"
            evidence=IBA] [GO:0060023 "soft palate development" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1353569 GO:GO:0016477 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0048468 GO:GO:0048484
            GO:GO:0051090 GO:GO:0031069 GO:GO:0050679 GO:GO:0006590
            GO:GO:0002089 GO:GO:0060023 eggNOG:COG5025 GO:GO:0060022
            GO:GO:0030878 GeneTree:ENSGT00700000104135 HOGENOM:HOG000231286
            HOVERGEN:HBG051642 KO:K09398 GO:GO:0048562 CTD:2301 OMA:FPYAPFP
            OrthoDB:EOG4001JR EMBL:AF142647 IPI:IPI00135416 RefSeq:NP_056573.1
            UniGene:Mm.377122 ProteinModelPortal:Q9QY14 SMR:Q9QY14
            STRING:Q9QY14 PhosphoSite:Q9QY14 PRIDE:Q9QY14
            Ensembl:ENSMUST00000050940 GeneID:30923 KEGG:mmu:30923
            InParanoid:Q9QY14 NextBio:307312 Bgee:Q9QY14 CleanEx:MM_FOXE3
            Genevestigator:Q9QY14 GermOnline:ENSMUSG00000044518 Uniprot:Q9QY14
        Length = 288

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 40/74 (54%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +A+++AP  R+TL  IY+FIT  F +YR++   W+NSIRHNL+LN CF KV R
Sbjct:    68 SYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRHNLTLNDCFVKVPR 127

Query:    75 PKDDPGKGSYWAID 88
                +PGKG+YW +D
Sbjct:   128 EPGNPGKGNYWTLD 141


>RGD|621727 [details] [associations]
            symbol:Foxe3 "forkhead box E3" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001654 "eye development"
            evidence=ISO;IMP] [GO:0002089 "lens morphogenesis in camera-type
            eye" evidence=IBA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISO;NAS] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA;ISO;IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=IEA;ISO] [GO:0006590 "thyroid hormone generation"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0016477 "cell migration" evidence=IBA] [GO:0030878 "thyroid
            gland development" evidence=IBA] [GO:0031069 "hair follicle
            morphogenesis" evidence=IBA] [GO:0043010 "camera-type eye
            development" evidence=IEA;ISO;IMP] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048468 "cell development" evidence=IEA;ISO;IMP] [GO:0048484
            "enteric nervous system development" evidence=IBA] [GO:0048485
            "sympathetic nervous system development" evidence=IRD] [GO:0048562
            "embryonic organ morphogenesis" evidence=IBA] [GO:0048846 "axon
            extension involved in axon guidance" evidence=IRD] [GO:0048937
            "lateral line nerve glial cell development" evidence=IRD]
            [GO:0050679 "positive regulation of epithelial cell proliferation"
            evidence=IEA;ISO;IMP] [GO:0051090 "regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0060022 "hard palate development" evidence=IBA] [GO:0060023
            "soft palate development" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 RGD:621727
            GO:GO:0016477 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0048468 GO:GO:0048484 GO:GO:0051090 GO:GO:0031069
            GO:GO:0050679 GO:GO:0006590 GO:GO:0002089 GO:GO:0060023
            eggNOG:COG5025 GO:GO:0060022 GO:GO:0030878 HOGENOM:HOG000231286
            GO:GO:0048562 OrthoDB:EOG4001JR EMBL:L13207 IPI:IPI00231011
            PIR:I60921 UniGene:Rn.92407 ProteinModelPortal:Q63250 SMR:Q63250
            STRING:Q63250 PhosphoSite:Q63250 UCSC:RGD:621727 InParanoid:Q63250
            Genevestigator:Q63250 GermOnline:ENSRNOG00000007770 Uniprot:Q63250
        Length = 101

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 40/74 (54%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +A+++AP  R+TL  IY+FIT  F +YR++   W+NSIRHNL+LN CF KV R
Sbjct:     7 SYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRHNLTLNDCFVKVPR 66

Query:    75 PKDDPGKGSYWAID 88
                +PGKG+YW +D
Sbjct:    67 EPGNPGKGNYWTLD 80


>UNIPROTKB|Q63250 [details] [associations]
            symbol:Foxe3 "Forkhead box protein E3" species:10116
            "Rattus norvegicus" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
            proliferation" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:621727 GO:GO:0016477
            GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0048468
            GO:GO:0048484 GO:GO:0051090 GO:GO:0031069 GO:GO:0050679
            GO:GO:0006590 GO:GO:0002089 GO:GO:0060023 eggNOG:COG5025
            GO:GO:0060022 GO:GO:0030878 HOGENOM:HOG000231286 GO:GO:0048562
            OrthoDB:EOG4001JR EMBL:L13207 IPI:IPI00231011 PIR:I60921
            UniGene:Rn.92407 ProteinModelPortal:Q63250 SMR:Q63250 STRING:Q63250
            PhosphoSite:Q63250 UCSC:RGD:621727 InParanoid:Q63250
            Genevestigator:Q63250 GermOnline:ENSRNOG00000007770 Uniprot:Q63250
        Length = 101

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 40/74 (54%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +A+++AP  R+TL  IY+FIT  F +YR++   W+NSIRHNL+LN CF KV R
Sbjct:     7 SYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRHNLTLNDCFVKVPR 66

Query:    75 PKDDPGKGSYWAID 88
                +PGKG+YW +D
Sbjct:    67 EPGNPGKGNYWTLD 80


>ZFIN|ZDB-GENE-990616-47 [details] [associations]
            symbol:foxb1.2 "forkhead box B1.2" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0008301
            "DNA binding, bending" evidence=IBA] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0007420 "brain development" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0033504 "floor
            plate development" evidence=ISS] [GO:0061374 "mammillothalamic
            axonal tract development" evidence=ISS] [GO:0061379 "inferior
            colliculus development" evidence=ISS] [GO:0008542 "visual learning"
            evidence=ISS] [GO:0007412 "axon target recognition" evidence=ISS]
            [GO:0001756 "somitogenesis" evidence=ISS] [GO:0005634 "nucleus"
            evidence=IEA;ISS] [GO:0043524 "negative regulation of neuron
            apoptotic process" evidence=ISS] [GO:0061381 "cell migration in
            diencephalon" evidence=ISS] [GO:0021855 "hypothalamus cell
            migration" evidence=ISS] [GO:0022029 "telencephalon cell migration"
            evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-990616-47 GO:GO:0043565 GO:GO:0008542 GO:GO:0043524
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0001756 GO:GO:0003690 GO:GO:0008134
            GO:GO:0051090 GO:GO:0007412 GO:GO:0033504 eggNOG:COG5025
            GO:GO:0009888 GO:GO:0022029 GeneTree:ENSGT00700000104135
            HOGENOM:HOG000007545 HOVERGEN:HBG102104 KO:K09395 OMA:AREYKVP
            OrthoDB:EOG40GCRF GO:GO:0061381 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 HSSP:Q63245 EMBL:CU462819 EMBL:CU929228 EMBL:AF052246
            EMBL:BC056754 EMBL:BC066395 IPI:IPI00513060 RefSeq:NP_571360.1
            RefSeq:XP_003201510.1 RefSeq:XP_003201511.1 UniGene:Dr.75814
            SMR:O73779 STRING:O73779 Ensembl:ENSDART00000125036
            Ensembl:ENSDART00000128240 GeneID:100535158 GeneID:30542
            KEGG:dre:100535158 KEGG:dre:30542 CTD:30542 InParanoid:O73779
            NextBio:20806922 Uniprot:O73779
        Length = 297

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 40/73 (54%), Positives = 51/73 (69%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SL  +AI + P+  + L+EIY+FI   FPYYRE    W+NS+RHNLS N CF K+ R
Sbjct:    17 SYISLTAMAIQSCPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPR 76

Query:    75 PKDDPGKGSYWAI 87
               D PGKGS+WA+
Sbjct:    77 RPDQPGKGSFWAL 89


>UNIPROTKB|Q70VZ3 [details] [associations]
            symbol:foxE "Uncharacterized protein" species:7719 "Ciona
            intestinalis" [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0016477 "cell
            migration" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048484 "enteric nervous system development" evidence=IBA]
            [GO:0048485 "sympathetic nervous system development" evidence=IBA]
            [GO:0048562 "embryonic organ morphogenesis" evidence=IBA]
            [GO:0048937 "lateral line nerve glial cell development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0048846
            "axon extension involved in axon guidance" evidence=IRD]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0016477 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0048485 GO:GO:0048484 GO:GO:0051090 GO:GO:0009888
            GeneTree:ENSGT00700000104135 GO:GO:0048937 GO:GO:0048562
            HSSP:Q01167 EMBL:EAAA01002052 EMBL:AJ534401 RefSeq:NP_001027947.1
            UniGene:Cin.14354 SMR:Q70VZ3 Ensembl:ENSCINT00000015355
            GeneID:445746 KEGG:cin:445746 CTD:445746 HOGENOM:HOG000169920
            HOVERGEN:HBG065789 InParanoid:Q70VZ3 Uniprot:Q70VZ3
        Length = 721

 Score = 236 (88.1 bits), Expect = 8.7e-19, P = 8.7e-19
 Identities = 40/74 (54%), Positives = 55/74 (74%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI+++P+ ++TL  IY+FI   FP+YRE N  W+NSIRHNL+LN CF K+ R
Sbjct:   355 SYIALISMAIASSPERKLTLGHIYKFIMERFPFYREQNKKWQNSIRHNLTLNDCFIKLPR 414

Query:    75 PKDDPGKGSYWAID 88
                 PGKG+YW +D
Sbjct:   415 EPGKPGKGNYWTLD 428


>UNIPROTKB|Q4H3H5 [details] [associations]
            symbol:Ci-FoxQ "Transcription factor protein" species:7719
            "Ciona intestinalis" [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006309 "apoptotic DNA fragmentation"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0030331 "estrogen receptor binding"
            evidence=IBA] [GO:0031624 "ubiquitin conjugating enzyme binding"
            evidence=IBA] [GO:0043028 "cysteine-type endopeptidase regulator
            activity involved in apoptotic process" evidence=IBA] [GO:0043280
            "positive regulation of cysteine-type endopeptidase activity
            involved in apoptotic process" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048513 "organ development" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0043565
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0043280 GO:GO:0006309 GO:GO:0008134 GO:GO:0007389
            GO:GO:0030331 GO:GO:0051090 GO:GO:0048513 eggNOG:COG5025
            GO:GO:0009888 GO:GO:0043028 GO:GO:0031624 KO:K09410 EMBL:AB210447
            RefSeq:NP_001071718.1 UniGene:Cin.23499 ProteinModelPortal:Q4H3H5
            SMR:Q4H3H5 GeneID:778621 KEGG:cin:778621 CTD:778621
            HOGENOM:HOG000204423 InParanoid:Q4H3H5 Uniprot:Q4H3H5
        Length = 385

 Score = 229 (85.7 bits), Expect = 8.9e-19, P = 8.9e-19
 Identities = 50/126 (39%), Positives = 75/126 (59%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY +LI +AI ++  G++TL EI +++   FP++R +  GW+NS+RHNLSLN+CF K+ R
Sbjct:   122 SYIALIAMAIRDSANGKLTLAEINEYLMKKFPFFRGSYTGWRNSVRHNLSLNECFQKILR 181

Query:    75 PKDDP-GKGSYWAIDYN--HTADDGPSKKKVK--LPRVSPYSPVECXXXXXXXDVHNSKP 129
                 P GK +YW I+ N  +T  DG  +++ K    R+S  SPV            +S  
Sbjct:   182 DPSRPWGKDNYWTINPNSEYTFADGVFRRRRKRLAARISRKSPVARGPMMTSLVTTSSPT 241

Query:   130 PTSISS 135
             PT +SS
Sbjct:   242 PTVMSS 247


>UNIPROTKB|Q4H3I2 [details] [associations]
            symbol:Ci-FoxK "Transcription factor protein" species:7719
            "Ciona intestinalis" [GO:0000287 "magnesium ion binding"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR000253 InterPro:IPR001766
            InterPro:IPR008984 InterPro:IPR018122 Pfam:PF00250 Pfam:PF00498
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50006
            PROSITE:PS50039 SMART:SM00240 SMART:SM00339 GO:GO:0000287
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888 KO:K09404
            EMBL:AB210440 RefSeq:NP_001071715.1 UniGene:Cin.25903
            ProteinModelPortal:Q4H3I2 SMR:Q4H3I2 GeneID:778618 KEGG:cin:778618
            CTD:588569 InParanoid:Q4H3I2 Uniprot:Q4H3I2
        Length = 614

 Score = 234 (87.4 bits), Expect = 1.0e-18, P = 1.0e-18
 Identities = 43/74 (58%), Positives = 56/74 (75%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SYA LI  AIS+AP  ++TL+ IY  IT  +PYYR A+ GW+NSIRHNLSLN+ F KV R
Sbjct:   275 SYAQLIIQAISSAPHRQLTLSGIYAHITKNYPYYRTADKGWQNSIRHNLSLNRYFVKVPR 334

Query:    75 PKDDPGKGSYWAID 88
              +++ GKGS+W +D
Sbjct:   335 SQEESGKGSFWKVD 348


>UNIPROTKB|Q8AWH1 [details] [associations]
            symbol:foxa1 "Forkhead box protein A1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010817
            "regulation of hormone levels" evidence=IBA] [GO:0019904 "protein
            domain specific binding" evidence=IBA] [GO:0042593 "glucose
            homeostasis" evidence=IBA] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048665 "neuron fate specification" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IBA] [GO:0060487 "lung epithelial cell differentiation"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0019904 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0042593 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0045666
            GO:GO:0008134 GO:GO:0007389 GO:GO:0060487 GO:GO:0048665
            GO:GO:0051090 GO:GO:0010817 GO:GO:0060441 eggNOG:COG5025
            HSSP:Q99958 InterPro:IPR018533 Pfam:PF09354 CTD:3169
            HOGENOM:HOG000231817 HOVERGEN:HBG006621 KO:K09387 OrthoDB:EOG466VMM
            EMBL:AY157637 RefSeq:NP_989419.1 UniGene:Str.1180
            ProteinModelPortal:Q8AWH1 SMR:Q8AWH1 STRING:Q8AWH1 GeneID:395059
            KEGG:xtr:395059 Xenbase:XB-GENE-487352 InParanoid:Q8AWH1
            Uniprot:Q8AWH1
        Length = 428

 Score = 230 (86.0 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 43/73 (58%), Positives = 51/73 (69%)

Query:    15 SYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVAR 74
             SY SLI +AI  AP   +TL+EIYQ+I   F YYR+    W+NSIRH+LS N CF KVAR
Sbjct:   162 SYISLITMAIQQAPSKMLTLSEIYQWIMDLFLYYRQNQQRWQNSIRHSLSFNDCFVKVAR 221

Query:    75 PKDDPGKGSYWAI 87
               D PGKGSYW +
Sbjct:   222 SPDKPGKGSYWTL 234


>FB|FBgn0004897 [details] [associations]
            symbol:fd96Ca "forkhead domain 96Ca" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0009790 "embryo development" evidence=IBA;NAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0048806 "genitalia development" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0048813 "dendrite morphogenesis" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003705 "RNA polymerase
            II distal enhancer sequence-specific DNA binding transcription
            factor activity" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0051090 "regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            EMBL:AE014297 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0048806 GO:GO:0008301
            GO:GO:0009790 GO:GO:0048813 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888 KO:K09411
            GeneTree:ENSGT00700000104135 EMBL:BT029152 EMBL:M96443
            RefSeq:NP_524495.1 UniGene:Dm.27400 ProteinModelPortal:P32028
            SMR:P32028 EnsemblMetazoa:FBtr0084770 GeneID:43010
            KEGG:dme:Dmel_CG11921 CTD:43010 FlyBase:FBgn0004897
            InParanoid:P32028 OMA:DIDVVEC OrthoDB:EOG4CFXR1 PhylomeDB:P32028
            GenomeRNAi:43010 NextBio:831795 Bgee:P32028 GermOnline:CG11921
            Uniprot:P32028
        Length = 372

 Score = 227 (85.0 bits), Expect = 1.2e-18, P = 1.2e-18
 Identities = 42/80 (52%), Positives = 55/80 (68%)

Query:     8 GNIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNK 67
             G  K   SY SL  +AI ++P+  + L++IY+FIT  FPYYR+    W+NS+RHNLS N 
Sbjct:    10 GEQKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSFND 69

Query:    68 CFTKVARPKDDPGKGSYWAI 87
             CF KV R  D PGKG+YWA+
Sbjct:    70 CFIKVPRRPDRPGKGAYWAL 89

WARNING:  HSPs involving 351 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.132   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      148       141   0.00091  102 3  11 22  0.48    31
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  601
  No. of states in DFA:  579 (62 KB)
  Total size of DFA:  153 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.27u 0.08s 14.35t   Elapsed:  00:00:02
  Total cpu time:  14.30u 0.09s 14.39t   Elapsed:  00:00:02
  Start:  Thu Aug 15 17:03:53 2013   End:  Thu Aug 15 17:03:55 2013
WARNINGS ISSUED:  2

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