RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy14921
         (148 letters)



>d2c6ya1 a.4.5.14 (A:1-98) Interleukin enhancer binding factor
          {Human (Homo sapiens) [TaxId: 9606]}
          Length = 98

 Score =  117 bits (294), Expect = 9e-36
 Identities = 46/80 (57%), Positives = 58/80 (72%)

Query: 9  NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKC 68
          + K   SYA LI  AI+ AP  ++TLN IY  IT  +PYYR A+ GW+NSIRHNLSLN+ 
Sbjct: 1  DSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRY 60

Query: 69 FTKVARPKDDPGKGSYWAID 88
          F KV R +++PGKGS+W ID
Sbjct: 61 FIKVPRSQEEPGKGSFWRID 80


>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11
          (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 94

 Score =  116 bits (292), Expect = 1e-35
 Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 2/89 (2%)

Query: 10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
          +K   SY +LI +AI NAP+ ++TLN IYQFI   FP+YRE   GW+NSIRHNLSLN+CF
Sbjct: 3  VKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 62

Query: 70 TKVARPKDDPGKGSYWAID--YNHTADDG 96
           KV R    PGKGSYW +D    +  ++G
Sbjct: 63 VKVPRDDKKPGKGSYWTLDPDSYNMFENG 91


>d2hdca_ a.4.5.14 (A:) Genesis {Rat (Rattus norvegicus) [TaxId:
           10116]}
          Length = 97

 Score =  116 bits (291), Expect = 2e-35
 Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 2/96 (2%)

Query: 10  IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
           +K   SY +LI +AI  +PQ ++TL+ I +FI++ FPYYRE    W+NSIRHNLSLN CF
Sbjct: 1   VKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCF 60

Query: 70  TKVARPKDDPGKGSYWAID--YNHTADDGPSKKKVK 103
            K+ R   +PGKG+YW +D       D+G   ++ K
Sbjct: 61  VKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRK 96


>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat
          (Rattus norvegicus) [TaxId: 10116]}
          Length = 75

 Score =  112 bits (281), Expect = 4e-34
 Identities = 35/74 (47%), Positives = 51/74 (68%), Gaps = 1/74 (1%)

Query: 16 YASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCFTKVARP 75
          Y +LI +AI ++  GR+TL EI +++   FP++R +  GW+NS+RHNLSLN CF KV R 
Sbjct: 1  YIALITMAIRDSAGGRLTLAEINEYLMGKFPFFRGSYTGWRNSVRHNLSLNDCFVKVLRD 60

Query: 76 KDDP-GKGSYWAID 88
             P GK +YW ++
Sbjct: 61 PSRPWGKDNYWMLN 74


>d3bpya1 a.4.5.14 (A:93-177) Afx (Foxo4) {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 85

 Score =  107 bits (268), Expect = 5e-32
 Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 7/85 (8%)

Query: 9  NIKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYRE-----ANAGWKNSIRHNL 63
          N     SYA LI  AI +AP+ R+TL +IY+++  T PY+++     ++AGWKNSIRHNL
Sbjct: 3  NAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKGDSNSSAGWKNSIRHNL 62

Query: 64 SLNKCFTKVARPKDDPGKGSYWAID 88
          SL+  F KV    +  GK S+W ++
Sbjct: 63 SLHSKFIKV--HNEATGKSSWWMLN 85


>d2a07f1 a.4.5.14 (F:503-584) Forkhead box protein P2, FOXP2
          {Human (Homo sapiens) [TaxId: 9606]}
          Length = 82

 Score =  102 bits (257), Expect = 2e-30
 Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 5/79 (6%)

Query: 10 IKCTSSYASLIRLAISNAPQGRMTLNEIYQFITHTFPYYREANAGWKNSIRHNLSLNKCF 69
          ++   +YA+LIR AI  +   ++TLNEIY + T TF Y+R   A WKN++RHNLSL+KCF
Sbjct: 1  VRPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCF 60

Query: 70 TKVARPKDDPGKGSYWAID 88
           +V     +  KG+ W +D
Sbjct: 61 VRV-----ENVKGAVWTVD 74


>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase
           {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
          Length = 653

 Score = 26.0 bits (57), Expect = 1.9
 Identities = 4/24 (16%), Positives = 11/24 (45%)

Query: 89  YNHTADDGPSKKKVKLPRVSPYSP 112
            NH A +  + + + + ++   S 
Sbjct: 88  PNHMAVNSLNWRLMDVLKMGKKSK 111


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.314    0.129    0.397 

Gapped
Lambda     K      H
   0.267   0.0606    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 532,676
Number of extensions: 22470
Number of successful extensions: 38
Number of sequences better than 10.0: 1
Number of HSP's gapped: 34
Number of HSP's successfully gapped: 7
Length of query: 148
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 71
Effective length of database: 1,350,386
Effective search space: 95877406
Effective search space used: 95877406
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 49 (22.9 bits)