BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14923
(180 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195449721|ref|XP_002072195.1| GK22718 [Drosophila willistoni]
gi|194168280|gb|EDW83181.1| GK22718 [Drosophila willistoni]
Length = 256
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 92/162 (56%), Gaps = 5/162 (3%)
Query: 6 LTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTS--QPLSIPEKPKKPLTPYFKFQGQI 63
L+ G G + +R S++ + ++Q + + + +P +PKKPLTPYF++ ++
Sbjct: 8 LSRGSLIGSLINKVRPLAA---ASISNSPVQQSKTVEEQVGLPPRPKKPLTPYFRYMREM 64
Query: 64 RNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPE 123
R K++ NPNI +E + +S+ W + K RL++EY K+KE Y KY +T E
Sbjct: 65 RPKLIAANPNISTVEAVRQLSKSWVVVDAKLKDRLQDEYRKDKETYIAQRAKYDATVTDE 124
Query: 124 AIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
+R+ K+ KE+R+++K +E G+PKKP ++F F+
Sbjct: 125 QRAEIRQIKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFV 166
>gi|224924366|gb|ACN69133.1| mitochondrial transcription factor A [Stomoxys calcitrans]
Length = 256
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 6 LTTGVFTGGNVFN--LRSC--LMPHLN------SVTTAGLKQQTSQPLSIPEKPKKPLTP 55
LT +F G+ + C L P N A K + + +P +PKKPLTP
Sbjct: 3 LTVSLFNKGSFLGSLINKCRPLAPPANISLRGPPSVAASTKVTIEEKVGLPIRPKKPLTP 62
Query: 56 YFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKK 115
YF+F ++R KI+ NP + ++++ + VS++W+ + + K+RL+ EY KE++ Y + K
Sbjct: 63 YFRFMKELRPKIVASNPKMSLVDIVRQVSKKWESVDPSLKQRLQEEYKKEQQEYVEKRTK 122
Query: 116 YHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
Y ++T E +++ K+ K + KE+R M++ ++ G+PKKP ++F I
Sbjct: 123 YESKITDEQRNQIKELKQEKVEAKERRMMRRRIKDLGRPKKPASAFIRLI 172
>gi|195060651|ref|XP_001995833.1| GH14163 [Drosophila grimshawi]
gi|193891625|gb|EDV90491.1| GH14163 [Drosophila grimshawi]
Length = 252
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
Query: 6 LTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRN 65
LT G G + +R +++ + + Q + +P +PKKPLTPYF+F ++R
Sbjct: 4 LTRGSIIGSLISKVRPLGAAGISNSSVLQARTPEEQ-IGLPPRPKKPLTPYFRFMREMRP 62
Query: 66 KIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAI 125
K++ ++P I IEV + +S+ W + K+RL++EY ++EIY KY +LT E
Sbjct: 63 KLIAKDPKISTIEVVRQLSKNWVSVDPKMKERLQSEYKIDQEIYLDQRTKYDAKLTDEQR 122
Query: 126 EFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
+++ K+ KE+++++K +E G+PKKP ++F F+
Sbjct: 123 AEIKQMKQDISDAKERKQLRKRVKELGRPKKPASAFLRFV 162
>gi|198449964|ref|XP_001357800.2| GA18041 [Drosophila pseudoobscura pseudoobscura]
gi|198130831|gb|EAL26935.2| GA18041 [Drosophila pseudoobscura pseudoobscura]
Length = 256
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 94/160 (58%), Gaps = 1/160 (0%)
Query: 6 LTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRN 65
L+ G G + +R + +L++ + L + + + +P +PKKPLTPYF+F ++R
Sbjct: 8 LSRGSIIGSLINKVRPLAVANLSN-SPVQLSKTVEEQVGLPPRPKKPLTPYFRFMREMRP 66
Query: 66 KIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAI 125
K++ NP I IEV + +++ W K+RL+ E+ K++++Y + KY LT E
Sbjct: 67 KLIATNPTITTIEVVRQLAKSWVDADTNLKERLQVEFKKDQQVYLEQRTKYDATLTDEQR 126
Query: 126 EFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
+++ K+ + KE+R+++K +E G+PKKP ++F FI
Sbjct: 127 AGIKQLKKDIGEAKERRQLRKRVKELGRPKKPASAFLRFI 166
>gi|118788729|ref|XP_316944.3| AGAP008499-PA [Anopheles gambiae str. PEST]
gi|116122885|gb|EAA12238.3| AGAP008499-PA [Anopheles gambiae str. PEST]
Length = 277
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 88/155 (56%), Gaps = 5/155 (3%)
Query: 14 GNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPN 73
G++ ++ SC + ++ AG + S+PEKPK+P+ Y +F IR+ + NP
Sbjct: 23 GSLSSVPSCGLHATATLNDAGTATK-----SVPEKPKRPMNTYIRFAQSIRSSLASANPQ 77
Query: 74 IKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKE 133
+++KL + +W+ + +A K +LE EY +E+ ++ Q KY +LT ++ E++
Sbjct: 78 ASPTDISKLAAVKWQSLDQATKAKLEEEYKREQAVWLQKNAKYLSQLTDAQKAEIKLERQ 137
Query: 134 VKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
+ + K KRE K++ +E G+PK+P N++ F N
Sbjct: 138 QRNEGKVKREQKRMLKELGRPKRPMNAYLRFCAQN 172
>gi|157136745|ref|XP_001663824.1| mitochondrial transcription factor A, putative [Aedes aegypti]
gi|108869859|gb|EAT34084.1| AAEL013643-PA [Aedes aegypti]
Length = 255
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 82/134 (61%), Gaps = 4/134 (2%)
Query: 44 SIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
++PEKPK+P+ Y +F +R ++ +NP +++KL + +W+ + A K +LE+EY
Sbjct: 48 ALPEKPKRPVNAYIRFLQSVRPSLLAKNPKASPTDISKLAAAQWQVLDPASKSKLEDEYK 107
Query: 104 KEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYL 163
KE+ ++ Q KY +LT + + +R+ + K ++K KRE KK +E G+PK+P N F L
Sbjct: 108 KEQTVWLQKNAKYLSQLTDQQKQDIRQARTEKTEEKAKREYKKKVKELGRPKRPLNGFLL 167
Query: 164 FIKD----NIDKKE 173
+ D N+ K+E
Sbjct: 168 YCADKKPKNLSKEE 181
>gi|157107110|ref|XP_001649627.1| mitochondrial transcription factor A, putative [Aedes aegypti]
gi|157107112|ref|XP_001649628.1| mitochondrial transcription factor A, putative [Aedes aegypti]
gi|108868738|gb|EAT32963.1| AAEL014794-PA [Aedes aegypti]
gi|108868739|gb|EAT32964.1| AAEL014794-PB [Aedes aegypti]
Length = 255
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 82/134 (61%), Gaps = 4/134 (2%)
Query: 44 SIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
++PEKPK+P+ Y +F +R ++ +NP +++KL + +W+ + A K +LE+EY
Sbjct: 48 ALPEKPKRPVNAYIRFLQSVRPSLLAKNPKASPTDISKLAAAQWQVLDPASKSKLEDEYK 107
Query: 104 KEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYL 163
KE+ ++ Q KY +LT + + +R+ + K ++K KRE KK +E G+PK+P N F L
Sbjct: 108 KEQTVWLQKNAKYLSQLTDQQKQDIRQARTEKTEEKAKREYKKKVKELGRPKRPLNGFLL 167
Query: 164 FIKD----NIDKKE 173
+ D N+ K+E
Sbjct: 168 YCADKKPKNLSKEE 181
>gi|195390660|ref|XP_002053986.1| GJ24186 [Drosophila virilis]
gi|194152072|gb|EDW67506.1| GJ24186 [Drosophila virilis]
Length = 256
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 80/123 (65%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
+ +P +PKKPLTPYF+F ++R K++ ++P I +EV + +S+ W + K+RL++EY
Sbjct: 44 IGLPPRPKKPLTPYFRFMREMRPKMLAKDPKITTVEVVRQLSKSWVDVDPKLKERLQSEY 103
Query: 103 AKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFY 162
K++EIY + KY LT + +++ K+ KE+++++K +E G+PKKP ++F
Sbjct: 104 KKDQEIYLEQRTKYDATLTDQQRAEIKQMKQDINDAKERKQLRKRIKELGRPKKPASAFL 163
Query: 163 LFI 165
F+
Sbjct: 164 RFV 166
>gi|194744166|ref|XP_001954566.1| GF18333 [Drosophila ananassae]
gi|190627603|gb|EDV43127.1| GF18333 [Drosophila ananassae]
Length = 257
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 93/166 (56%), Gaps = 10/166 (6%)
Query: 7 TTGVFTGGNVFNLRSCLMPHLNSVTTAGLK-------QQTSQPLSIPEKPKKPLTPYFKF 59
TT + + G++F LM + + AG+ + + + +P +PKKPLTPYF+F
Sbjct: 5 TTMLSSRGSLFG---SLMGKVRPLAAAGISNSPVTQSKTLEEQVGLPPRPKKPLTPYFRF 61
Query: 60 QGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDE 119
R K++ NP + I+ + +S+ W + K+RL+ EY K+++IY + KY
Sbjct: 62 MRDQRPKLIAANPKLSTIDAVRQLSKSWSEADVKLKERLQTEYKKDQQIYLEQRTKYDAT 121
Query: 120 LTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
LT E +++ K+ + KE+R+++K +E G+PKKP ++F FI
Sbjct: 122 LTDEQRAEIKQLKQDIVEAKERRQLRKRVKELGRPKKPASAFLRFI 167
>gi|195158925|ref|XP_002020334.1| GL13929 [Drosophila persimilis]
gi|194117103|gb|EDW39146.1| GL13929 [Drosophila persimilis]
Length = 256
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
Query: 6 LTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRN 65
L+ G G + +R + ++++ K Q + +P +PKKPLTPYF+F ++R
Sbjct: 8 LSRGSIIGSLINKVRPLAVANISNSPVQQSKTVEEQ-VGLPPRPKKPLTPYFRFMREMRP 66
Query: 66 KIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAI 125
K++ NP I IEV + +++ W K+RL+ E+ K++++Y + KY LT E
Sbjct: 67 KLIATNPTITTIEVVRQLAKSWVDADTNLKERLQVEFKKDQQVYLEQRTKYDATLTDEQR 126
Query: 126 EFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
+++ K+ + KE+R+++K +E G+PKKP ++F FI
Sbjct: 127 AGIKQLKKDIGEAKERRQLRKRVKELGRPKKPASAFLRFI 166
>gi|17738065|ref|NP_524415.1| mitochondrial transcription factor A, isoform A [Drosophila
melanogaster]
gi|12060501|dbj|BAB20089.1| mitochondrial transcription factor A [Drosophila melanogaster]
gi|15021779|dbj|BAB62223.1| mitochondrial transcription factor A [Drosophila melanogaster]
gi|16769572|gb|AAL29005.1| LD40493p [Drosophila melanogaster]
gi|23176006|gb|AAN14356.1| mitochondrial transcription factor A, isoform A [Drosophila
melanogaster]
gi|220942230|gb|ACL83658.1| TFAM-PA [synthetic construct]
gi|220952444|gb|ACL88765.1| TFAM-PA [synthetic construct]
Length = 257
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 90/156 (57%), Gaps = 8/156 (5%)
Query: 14 GNVFN----LRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIME 69
G++ N L + + + +V + L++Q L +P +PKKPLTPYF+F + R K+
Sbjct: 16 GSLINKVRPLAAASISNTPAVPSKTLEEQ----LGLPPRPKKPLTPYFRFMREQRPKLKA 71
Query: 70 RNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLR 129
NP I +EV + +S+ W K+RL+ E+ ++++IY + KY LT E ++
Sbjct: 72 ANPQITTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQIYVEERTKYDATLTEEQRAEIK 131
Query: 130 KEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
+ K+ KE+R+++K +E G+PKKP ++F FI
Sbjct: 132 QLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFI 167
>gi|156553805|ref|XP_001603051.1| PREDICTED: transcription factor A, mitochondrial-like [Nasonia
vitripennis]
Length = 248
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 93/173 (53%), Gaps = 3/173 (1%)
Query: 1 MALFKLTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQ 60
M++F+L + F+ +V + R+ L A + +T + L IP PK+P TPY +F
Sbjct: 1 MSVFRLFS--FSNNSVKSCRNLLCSSFLE-QRALISGKTIKQLGIPTPPKRPCTPYIRFF 57
Query: 61 GQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDEL 120
IR KI E NP++ E+ K+V++EW K +KK L+ E+ E E+Y +N + Y +
Sbjct: 58 QNIRPKIKENNPDLNPKELVKVVAQEWAKYDPEKKKLLQKEFLSELEVYLKNFEAYKQSI 117
Query: 121 TPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDKKE 173
TPE + KE +KQ KE+ + GKPKKP F F+ + +K+
Sbjct: 118 TPEQQNLINSTKEKEKQAKEQARIHSKKESLGKPKKPPTGFLKFLMERKSQKD 170
>gi|195498223|ref|XP_002096431.1| GE25063 [Drosophila yakuba]
gi|194182532|gb|EDW96143.1| GE25063 [Drosophila yakuba]
Length = 257
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 87/157 (55%), Gaps = 1/157 (0%)
Query: 9 GVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIM 68
G G + +R +++ K Q + +P +PKKPLTPYF+F + R K+
Sbjct: 12 GGLIGSLINKVRPLAAASISNTPVVPSKTLEEQ-VGLPPRPKKPLTPYFRFMREQRPKLK 70
Query: 69 ERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFL 128
NP I +EV + +S+ W + K+RL+ E+ ++++IY + KY LT E +
Sbjct: 71 AANPQITTVEVVRQLSKSWSDVDAQLKERLQAEFKRDQQIYLEQRTKYDATLTEEQRAEI 130
Query: 129 RKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
++ K+ + KE+R+++K +E G+PKKP ++F FI
Sbjct: 131 KQLKQDIVEAKERRQLRKRVKELGRPKKPASAFLRFI 167
>gi|24648444|ref|NP_732527.1| mitochondrial transcription factor A, isoform B [Drosophila
melanogaster]
gi|23176007|gb|AAF55779.2| mitochondrial transcription factor A, isoform B [Drosophila
melanogaster]
Length = 284
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
Query: 19 LRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIE 78
L + + + +V + L++Q L +P +PKKPLTPYF+F + R K+ NP I +E
Sbjct: 52 LAAASISNTPAVPSKTLEEQ----LGLPPRPKKPLTPYFRFMREQRPKLKAANPQITTVE 107
Query: 79 VTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQK 138
V + +S+ W K+RL+ E+ ++++IY + KY LT E +++ K+
Sbjct: 108 VVRQLSKNWSDADAQLKERLQAEFKRDQQIYVEERTKYDATLTEEQRAEIKQLKQDLVDA 167
Query: 139 KEKREMKKLFRETGKPKKPGNSFYLFI 165
KE+R+++K +E G+PKKP ++F FI
Sbjct: 168 KERRQLRKRVKELGRPKKPASAFLRFI 194
>gi|170028315|ref|XP_001842041.1| transcription factor A, mitochondrial [Culex quinquefasciatus]
gi|167874196|gb|EDS37579.1| transcription factor A, mitochondrial [Culex quinquefasciatus]
Length = 261
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 94/169 (55%), Gaps = 12/169 (7%)
Query: 4 FKLTTGVFTGGNVF--NLRSCLMPHLNSVTTAGLKQQTS---QPLSIPEKPKKPLTPYFK 58
+ + +F+ ++ N+RS P L S GLK + + ++P KPK+P+ Y +
Sbjct: 3 MSVLSRLFSSTRLWTTNIRS---PGLCS----GLKTSAAGGGETATLPVKPKRPVNAYIR 55
Query: 59 FQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHD 118
F IR + +NP E++KL + +W+ + A K +LE EY K++ ++ Q KY
Sbjct: 56 FLQSIRPALKSKNPKASPTEISKLAAAQWQVLDLANKSKLEVEYKKDQAVWLQQNAKYLS 115
Query: 119 ELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
+LT E E +R+ + K ++K KRE +K ++ GKPK+P N F L+ +D
Sbjct: 116 QLTDEQKEEIRQSRVEKSEEKAKREHRKRVKDLGKPKRPLNGFLLYCQD 164
>gi|195569433|ref|XP_002102714.1| GD20056 [Drosophila simulans]
gi|194198641|gb|EDX12217.1| GD20056 [Drosophila simulans]
Length = 257
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 90/156 (57%), Gaps = 8/156 (5%)
Query: 14 GNVFN----LRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIME 69
G++ N L + + + +V + L++Q + +P +PKKPLTPYF+F + R K+
Sbjct: 16 GSLINKVRPLAAASISNTPAVPSKTLEEQ----VGLPPRPKKPLTPYFRFMREQRPKLKA 71
Query: 70 RNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLR 129
NP I +EV + +S+ W K+RL+ E+ ++++IY + KY LT E ++
Sbjct: 72 ANPQISTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQIYVEERTKYDATLTEEQRAEIK 131
Query: 130 KEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
+ K+ KE+R+++K +E G+PKKP ++F FI
Sbjct: 132 QLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFI 167
>gi|195353963|ref|XP_002043471.1| GM23183 [Drosophila sechellia]
gi|194127612|gb|EDW49655.1| GM23183 [Drosophila sechellia]
Length = 257
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 90/156 (57%), Gaps = 8/156 (5%)
Query: 14 GNVFN----LRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIME 69
G++ N L + + + +V + L++Q + +P +PKKPLTPYF+F + R K+
Sbjct: 16 GSLINKVRPLAAASISNTPAVPSKTLEEQ----VGLPPRPKKPLTPYFRFMREQRPKLKA 71
Query: 70 RNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLR 129
NP I +EV + +S+ W K+RL+ E+ +++++Y + KY LT E ++
Sbjct: 72 ANPQITTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQVYVEERTKYDATLTEEQRAEIK 131
Query: 130 KEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
+ K+ KE+R+++K +E G+PKKP ++F FI
Sbjct: 132 QLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFI 167
>gi|194899746|ref|XP_001979419.1| GG15368 [Drosophila erecta]
gi|190651122|gb|EDV48377.1| GG15368 [Drosophila erecta]
Length = 257
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 75/123 (60%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
+ +P +P+KPLTPYF+F + R K+ NP I IEV + +S+ W K+RL+ E+
Sbjct: 45 VGLPPRPRKPLTPYFRFMREQRPKLKAVNPQISTIEVVRTLSKNWSDADAHLKERLQAEF 104
Query: 103 AKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFY 162
++++IY + KY LT E +++ K+ KE+R+++K +E G+PKKP ++F
Sbjct: 105 KRDQQIYLEQRTKYDAALTDEQRAEIKQLKQDIVDAKERRQLRKRVKELGRPKKPASAFL 164
Query: 163 LFI 165
FI
Sbjct: 165 RFI 167
>gi|289742525|gb|ADD20010.1| mitochondrial transcription factor A CG4217-PA [Glossina morsitans
morsitans]
Length = 257
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 88/158 (55%)
Query: 8 TGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKI 67
T G V R +L +T + + + +P +PKKPLTPYF+F + R+K+
Sbjct: 11 TTSLLGSLVSKFRPITAANLCLSSTTNATKTLEEQVGLPPRPKKPLTPYFRFMAEHRSKL 70
Query: 68 MERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEF 127
N I IE+ +++S++W+ + K RL+ +Y +++ Y +N KY ++ + +
Sbjct: 71 HAENRKIPAIELVRIISKKWETCDPSVKTRLQEQYTIDRQKYIENRTKYEANISDKQRKE 130
Query: 128 LRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
++ K+ K+ KEKR M+K +E G+PKKP ++F F+
Sbjct: 131 IKGLKQEIKETKEKRIMRKRVKELGRPKKPASAFIKFL 168
>gi|312381602|gb|EFR27312.1| hypothetical protein AND_06042 [Anopheles darlingi]
Length = 278
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 84/157 (53%), Gaps = 8/157 (5%)
Query: 16 VFNLRSCLMPHLNSVTTAGLKQQTSQPL-------SIPEKPKKPLTPYFKFQGQIRNKIM 68
+ + R +P L +V T ++ PL S P+KPK+P+ Y ++ IR +
Sbjct: 16 LLSSRQSNLP-LATVATQSCGFHSTVPLENAAGKASAPQKPKRPVNAYIRYAQSIRADLA 74
Query: 69 ERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFL 128
+ NP+ +++ KL S +W+ + K RLE EY +E ++ Q KY +LT E L
Sbjct: 75 KANPSASQMDLAKLTSVKWQTLDPPSKARLEEEYKRELAVWLQQNAKYLSQLTEAQKEEL 134
Query: 129 RKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
+++++ K K KR++K+ ++ G+PK+P N F F
Sbjct: 135 KQDRQQKADDKAKRDLKRTLKQLGRPKRPINGFLRFC 171
>gi|390348780|ref|XP_003727081.1| PREDICTED: high mobility group B protein 13-like
[Strongylocentrotus purpuratus]
Length = 238
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 29 SVTTAGLKQQTSQP------------LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKI 76
S T GL +SQP IP KPK+PLT +F+F + R K+ PN+ +
Sbjct: 22 STTRPGLLGSSSQPKLPWMQDRKEFSEDIPAKPKRPLTSFFQFTSEQRPKLTAMEPNLSV 81
Query: 77 IEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFL----RKEK 132
+VTK + W+ + E EK+ ++ +E Y + ++ Y LT E ++ + R ++
Sbjct: 82 TDVTKRIGAMWRDLSEDEKEVYRLDFESRREKYTEEMEDYRSRLTDEQLDSMSEIDRNKR 141
Query: 133 EVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDKKEYEGKS 178
E+K +++ K EMKKL KPK+P + LFIK +++ G++
Sbjct: 142 EMKAKRRHKSEMKKL----NKPKRPPTGYSLFIKAQFNQQPAGGRT 183
>gi|195112822|ref|XP_002000971.1| GI10534 [Drosophila mojavensis]
gi|193917565|gb|EDW16432.1| GI10534 [Drosophila mojavensis]
Length = 256
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
Query: 53 LTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAE---KKRLENEYAKEKEIY 109
LTPYF+F ++R K++ +NP+I IEV + +S+ W GEA+ K+RL++EY +++E+Y
Sbjct: 54 LTPYFRFMREMRPKMLAKNPSISTIEVVRQLSKSW---GEADPKLKERLQSEYKRDQELY 110
Query: 110 AQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
+ KY LT E L++ K+ KE+++++K +E G+PKKP ++F FI
Sbjct: 111 LEQRTKYDATLTEEQRAELKQLKQDINDAKERKQLRKRVKELGRPKKPASAFLRFI 166
>gi|87248181|gb|ABD36143.1| transcription factor A [Bombyx mori]
Length = 249
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 14 GNVF--NLRSCLMPHLNSVT----TAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKI 67
N F N ++ L +N +T K+ Q L + KPK+PLTP+FKF Q+R +
Sbjct: 11 SNYFLGNYKTVLCGSVNWMTPMQSCDYTKKSAEQSLGL-NKPKRPLTPFFKFMSQMRPAL 69
Query: 68 MERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEF 127
+ +NP + E S+ W+++ K ++ EY K+ E Y + Y LT E
Sbjct: 70 LAKNPGMSSKEAMAWTSKHWQQLDMETKTQMAKEYQKDLEDYNKIKAMYETSLTEEQKAD 129
Query: 128 LRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI---KDNIDKK 172
++ KE Q KEK ++K ++E G+PKKP +S+++++ KDN+ K
Sbjct: 130 MKSVKEEMAQAKEKSKLKAEYKELGRPKKPMSSYFMYMQSSKDNMQGK 177
>gi|340711088|ref|XP_003394113.1| PREDICTED: ARS-binding factor 2, mitochondrial-like [Bombus
terrestris]
Length = 246
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 1 MALFKLTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQ 60
M F+ + N+ R+CL+ + + + L+Q L P KPK+P P+F +
Sbjct: 1 MVYFRRFIFLMRSENLLCTRNCLLNLYQNSSRSALRQLKDTVL--PPKPKRPEGPFFLYV 58
Query: 61 GQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDEL 120
I+ K +E P+I +++ K S +W ++ AEK+ N+Y K +EIY +K+Y++ +
Sbjct: 59 KHIKLKFLEETPDISQVQLLKRASRQWAELDLAEKEYFMNQYHKNREIYMNELKEYNNSI 118
Query: 121 TPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
T E E K+K+ Q K+ + G+PKK N F ++
Sbjct: 119 TNEQRELWEKKKKEYLQNNSSLSNKRKYEMLGRPKKSLNPFLCYV 163
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKE 107
+PKK L P+ + +N ++NPN E KL+S WK++ AEK+ N+ +
Sbjct: 151 RPKKSLNPFLCYVTSKKN---DKNPNTSFKEWVKLLSTSWKELSGAEKESYINKATQLSI 207
Query: 108 IYAQNVKKYHDELT----PEAI--EFLRKEKEV 134
Y ++++K+ E+ P+ + + LRK K +
Sbjct: 208 QYQKDLEKWEVEMIHSGHPDVVRPKILRKYKNI 240
>gi|91088019|ref|XP_974107.1| PREDICTED: similar to GA18041-PA [Tribolium castaneum]
gi|270012067|gb|EFA08515.1| hypothetical protein TcasGA2_TC006168 [Tribolium castaneum]
Length = 240
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 74/123 (60%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
L IP KPKKPLTPYFKF R ++++NPN+K+ +V ++ +WK + + K + EN+Y
Sbjct: 40 LKIPNKPKKPLTPYFKFIQDHRPALLKQNPNLKVTQVVSQLAADWKTVDPSLKAKYENDY 99
Query: 103 AKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFY 162
E E YA +Y + LT E L++ + K+ K KRE KK RE KPKKP +
Sbjct: 100 KNEMEEYADQYLRYTESLTTEQKMALKEYNKEVKKSKIKREKKKKVRENDKPKKPVGPYM 159
Query: 163 LFI 165
L++
Sbjct: 160 LYL 162
>gi|165970508|gb|AAI58368.1| tfam protein [Xenopus (Silurana) tropicalis]
Length = 285
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 99/185 (53%), Gaps = 12/185 (6%)
Query: 6 LTTGVFTGG---NVFNLRSCLMPHLNSVTTAGLKQQTS------QPLSIPEKPKKPLTPY 56
L GV GG ++ + S SV++ L Q S + + E PK+PLT Y
Sbjct: 9 LCRGV--GGLLRSLAGINSSQAARCTSVSSGILGLQCSPFRWFSKGATSSEYPKRPLTAY 66
Query: 57 FKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKY 116
++ + R K+ ++ P K++++TK+++ EWK + AEK+R E E++ Y + VK+Y
Sbjct: 67 LRYSIEQRPKLHKQYPEAKMMDLTKIIALEWKGLPSAEKERYEVVANAEQKKYREEVKQY 126
Query: 117 HDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNI-DKKEYE 175
++L+P +E R+++ + K++ K+ G+PK+P + F +F+ ++ D K
Sbjct: 127 REKLSPMQLELHREQRRQRLAKRKSVRKKRELTVLGRPKRPRSPFNIFMSEHFQDAKGAS 186
Query: 176 GKSYM 180
+S M
Sbjct: 187 SQSKM 191
>gi|13786148|ref|NP_112616.1| transcription factor A, mitochondrial precursor [Rattus norvegicus]
gi|4877353|dbj|BAA77755.1| mitochondrial transcription factor A (r-mtTFA) [Rattus norvegicus]
Length = 244
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 91/178 (51%), Gaps = 20/178 (11%)
Query: 1 MALFKLTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLS---IPEK-------PK 50
MALF+ GV + C AG + P+S IP+ PK
Sbjct: 1 MALFRGMWGVLRTLGRTGVEMC----------AGCGGRIPSPVSLICIPKCFSSLGNYPK 50
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
KP++ Y +F + K ++P+ K+ E+ + ++ W+++ EAEKK E ++ E ++Y
Sbjct: 51 KPMSSYLRFSTEQLPKFKAKHPDAKVSELIRKIAAMWRELPEAEKKVYEADFKAEWKVYK 110
Query: 111 QNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
+ V KY ++LTP + L KE K+ KK+ + ++ GKPK+P +++ +++ ++
Sbjct: 111 EAVSKYKEQLTPSQLMGLEKEARQKRLKKKAQIKRRELILLGKPKRPRSAYNIYVSES 168
>gi|22654148|sp|Q91ZW1.1|TFAM_RAT RecName: Full=Transcription factor A, mitochondrial; Short=mtTFA;
Flags: Precursor
gi|15991475|gb|AAL12892.1|AF377866_1 transcription factor A precursor [Rattus norvegicus]
gi|20177381|emb|CAC84763.1| mitochondrial transcription factor A [Rattus norvegicus]
gi|38304015|gb|AAH62022.1| Transcription factor A, mitochondrial [Rattus norvegicus]
gi|149043806|gb|EDL97257.1| transcription factor A, mitochondrial, isoform CRA_a [Rattus
norvegicus]
Length = 244
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 91/178 (51%), Gaps = 20/178 (11%)
Query: 1 MALFKLTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLS---IPEK-------PK 50
MALF+ GV + C AG + P+S IP+ PK
Sbjct: 1 MALFRGMWGVLRTLGRTGVEMC----------AGCGGRIPSPVSLICIPKCFSSLGNYPK 50
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
KP++ Y +F + K ++P+ K+ E+ + ++ W+++ EAEKK E ++ E ++Y
Sbjct: 51 KPMSSYLRFSTEQLPKFKAKHPDAKVSELIRKIAAMWRELPEAEKKVYEADFKAEWKVYK 110
Query: 111 QNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
+ V KY ++LTP + L KE K+ KK+ + ++ GKPK+P +++ +++ ++
Sbjct: 111 EAVSKYKEQLTPSQLMGLEKEARQKRLKKKAQIKRRELILLGKPKRPRSAYNIYVSES 168
>gi|348533213|ref|XP_003454100.1| PREDICTED: transcription factor A, mitochondrial-like [Oreochromis
niloticus]
Length = 287
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 1 MALFKLTTGVFTGGNVFNLRSCL--MPHLNSVTTAG----LKQQTSQPLSIPEKPKKPLT 54
MA + LT GV F++ SC + SV + +K TS+ S PK+PL
Sbjct: 1 MAPYLLTAGVSLLAKSFSVLSCTGSLARCTSVLPSAFFSPVKCLTSEARS---PPKRPLN 57
Query: 55 PYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVK 114
Y ++ Q + + +NP IK +++ K ++++W+ + +K+ + + +E + +++
Sbjct: 58 GYMRYVQQQKPIVARQNPEIKAVDLIKTIAQQWRSMSPEQKQPFQEASLRAREQFKVDLE 117
Query: 115 KYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNID 170
+Y +LTP ++ +EK ++ K++ K+ GKPK+P + F +F+ ++ +
Sbjct: 118 RYQAQLTPAQLQQQAQEKRQRRAKRKAIRKKRELTNLGKPKRPRSPFNIFMSEHFE 173
>gi|395820949|ref|XP_003783817.1| PREDICTED: transcription factor A, mitochondrial [Otolemur
garnettii]
Length = 422
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 16/174 (9%)
Query: 10 VFTGGNVFNLRS--CLMPHLN---SVTTAGLKQQTSQPLS---IPEK--------PKKPL 53
V T G + LRS L+ +L +V G + PLS IP PKKP+
Sbjct: 173 VLTAGPMALLRSMWSLLSNLGRSGAVLCTGCGSRLRIPLSFVYIPRGFSSDLTNYPKKPM 232
Query: 54 TPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNV 113
+ Y +F + I +NP++K E+ K ++E W+K+ ++EKK E+E E Y + +
Sbjct: 233 SSYLRFSKEQLPIIRAQNPDVKNTELIKKIAELWRKLPDSEKKIYEDESRAAWEAYKEEI 292
Query: 114 KKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
K ++LTP I L KE K+ KK+ K+ GKPK+P ++ +F+ +
Sbjct: 293 NKIQEQLTPSQIVSLEKEIMQKRLKKKALIKKRELTILGKPKRPRTAYNIFVSE 346
>gi|225706166|gb|ACO08929.1| Transcription factor A, mitochondrial precursor [Osmerus mordax]
Length = 297
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 76/123 (61%), Gaps = 2/123 (1%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+PL Y +F Q R ++ +NP I+ +++TK V+++W+ + +K+ E A E+E
Sbjct: 49 PKRPLNGYMRFLNQQRPIVLRQNPAIQFVDITKKVTQQWRTLSPEQKRPFEEASAVERER 108
Query: 109 YAQNVKKYHDELTP-EAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
+ +K+Y +L+P ++I + +E Q+K R+ ++L R GKPK+P ++F +++ +
Sbjct: 109 FKVILKQYQAQLSPAQSIALAEERREKLAQRKAVRKKRELNR-LGKPKRPRSAFNIYMTE 167
Query: 168 NID 170
+ +
Sbjct: 168 HFE 170
>gi|145541886|ref|XP_001456631.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424443|emb|CAK89234.1| unnamed protein product [Paramecium tetraurelia]
Length = 235
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 26 HLNSVTTAGLKQQTSQPLSIPEK--------PKKPLTPYFKFQGQIRNKIMERNPNIKII 77
H+N LK Q + +PEK PKKPLTP+F F + R K+++RNP IK+
Sbjct: 20 HMNKFCQQFLKDQNVTEIQVPEKKKERDPNAPKKPLTPFFLFNQKYREKVVDRNPEIKLT 79
Query: 78 EVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKE 133
+++++ +W + E EKK ++Y KE Y Q +K Y+++ E + RK+ E
Sbjct: 80 QISQMAGNKWSSMSEQEKKPYVDQYNAAKEKYEQELKDYNEKNGIETNDKKRKKSE 135
>gi|9963946|gb|AAG09777.1|AF246196_1 transcription factor A [Rattus norvegicus]
Length = 204
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 75/126 (59%)
Query: 44 SIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
S+ PKKP++ Y +F + K ++P+ K+ E+ + ++ W+++ EAEKK E ++
Sbjct: 4 SLGNYPKKPMSSYLRFSTEQLPKFKAKHPDAKVSELIRKIAAMWRELPEAEKKVYEADFK 63
Query: 104 KEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYL 163
E ++Y + V KY ++LTP + L KE K+ KK+ + ++ GKPK+P +++ +
Sbjct: 64 AEWKVYKEAVSKYKEQLTPSQLMGLEKEARQKRLKKKAQIKRRELILLGKPKRPRSAYNI 123
Query: 164 FIKDNI 169
++ ++
Sbjct: 124 YVSESF 129
>gi|109089744|ref|XP_001097656.1| PREDICTED: transcription factor A, mitochondrial isoform 2 [Macaca
mulatta]
gi|355562588|gb|EHH19182.1| hypothetical protein EGK_19843 [Macaca mulatta]
gi|355782915|gb|EHH64836.1| hypothetical protein EGM_18157 [Macaca fascicularis]
Length = 248
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 71/121 (58%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F Q +NP+ K E+ + +++ W+++ ++EKK + Y E E+
Sbjct: 50 PKKPVSSYLRFSKQQLPIYRAQNPDAKTTELVRRIAKHWRELPDSEKKIYRDAYKAEWEV 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y + + K+ ++LTP+ I L KE K+ K++ +K + GKPK+P +++ +++ +
Sbjct: 110 YKEKISKFKEQLTPDEITSLEKEILDKRLKRKAVTKRKELIQLGKPKRPRSAYNVYVAER 169
Query: 169 I 169
Sbjct: 170 F 170
>gi|198282001|ref|NP_001123683.1| transcription factor A, mitochondrial precursor [Sus scrofa]
gi|75052621|sp|Q5D144.1|TFAM_PIG RecName: Full=Transcription factor A, mitochondrial; Short=mtTFA;
Flags: Precursor
gi|60326706|gb|AAX18878.1| mitochondrial transcription factor A [Sus scrofa]
Length = 246
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 5/170 (2%)
Query: 1 MALFKLTTGVFT--GGNVFNLRSCLMPHLNS-VTTAGLKQQTSQPLSIPEKPKKPLTPYF 57
MAL + GV + G + +L + L S + A + + S LS PKKP+T Y
Sbjct: 1 MALLRGVWGVLSALGKSGADLCAVCGSRLRSPFSFAYVPRWFSSTLS--GFPKKPMTSYV 58
Query: 58 KFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYH 117
+F + +NP+ K E+ K ++E W+++ ++EKK E+ Y + ++Y + V +
Sbjct: 59 RFSKEQLPIFKAQNPDAKNSELIKKIAELWRELPDSEKKIYEDAYRADWQVYKEEVNRIQ 118
Query: 118 DELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
++LTP + L KE K+ KK+ K+ GKPK+P +++ +FI +
Sbjct: 119 EQLTPSQMVSLEKEIMQKRLKKKALIKKRELTMLGKPKRPRSAYNIFIAE 168
>gi|321472521|gb|EFX83491.1| hypothetical protein DAPPUDRAFT_315773 [Daphnia pulex]
Length = 258
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
Query: 15 NVFNLRSCLMPHLNSVTTAGLKQQT-SQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPN 73
++ NL + L S+ A +K+ + + L +PE+PKKP +PY +F GQ + + +P
Sbjct: 9 SLTNLGPKVSDQLWSMNYATVKRLSLEEKLGLPERPKKPSSPYLQFCGQKFTEFSKMHPG 68
Query: 74 IKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKE 133
++ ++E WK + K ++ NE+ ++ + + + +++Y+ LT L K+
Sbjct: 69 STFTDIAHKLAEAWKLVDIETKTKMMNEFHEKIKTHPEALQQYYSTLTDAQRVQLEAAKK 128
Query: 134 VKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDKKEYEGKSY 179
+ + +K K R++GKP +P F +F+KD KK +Y
Sbjct: 129 TRMESLKKIRSKFELRKSGKPTRPTGMFGVFVKDVYSKKTDHSTTY 174
>gi|6678303|ref|NP_033386.1| transcription factor A, mitochondrial precursor [Mus musculus]
gi|22654290|sp|P40630.2|TFAM_MOUSE RecName: Full=Transcription factor A, mitochondrial; Short=mtTFA;
AltName: Full=Testis-specific high mobility group
protein; Short=TS-HMG; Flags: Precursor
gi|1575123|gb|AAC52815.1| mitochondrial transcription factor A [Mus musculus]
gi|12805061|gb|AAH01987.1| Transcription factor A, mitochondrial [Mus musculus]
gi|26341192|dbj|BAC34258.1| unnamed protein product [Mus musculus]
gi|52789285|gb|AAH83084.1| Transcription factor A, mitochondrial [Mus musculus]
gi|74146831|dbj|BAE41382.1| unnamed protein product [Mus musculus]
gi|74191237|dbj|BAE39447.1| unnamed protein product [Mus musculus]
gi|74198670|dbj|BAE39809.1| unnamed protein product [Mus musculus]
gi|148700009|gb|EDL31956.1| transcription factor A, mitochondrial, isoform CRA_d [Mus musculus]
Length = 243
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 90/173 (52%), Gaps = 10/173 (5%)
Query: 1 MALFKLTTGVFTGGNVFNLRSCL-----MPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTP 55
MALF+ V + C +P +S++ + + S S+ PKKP++
Sbjct: 1 MALFRGMWSVLKALGRTGVEMCAGCGGRIP--SSISLVCIPKCFS---SMGSYPKKPMSS 55
Query: 56 YFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKK 115
Y +F + K ++P+ K+ E+ + ++ W+++ EAEKK E ++ E + Y + V K
Sbjct: 56 YLRFSTEQLPKFKAKHPDAKLSELVRKIAALWRELPEAEKKVYEADFKAEWKAYKEAVSK 115
Query: 116 YHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y ++LTP + + KE ++ KK+ ++ GKPK+P +++ +++ ++
Sbjct: 116 YKEQLTPSQLMGMEKEARQRRLKKKALVKRRELILLGKPKRPRSAYNIYVSES 168
>gi|67475910|ref|XP_653586.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56470556|gb|EAL48200.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449703217|gb|EMD43706.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica KU27]
Length = 111
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 24 MPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLV 83
MP N+ T+ + + P +PK+P TPYF + + R I E +P+ K+ E+ K+
Sbjct: 1 MPKGNTKTSKAKNTKDKKAKKDPNRPKRPPTPYFLYLNEHRASIKEEHPDAKVTEIAKIA 60
Query: 84 SEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKY 116
SE+WK +GE EKK + + KE Y ++++KY
Sbjct: 61 SEQWKALGEEEKKEYQTKADAAKEQYKKDIEKY 93
>gi|147907314|ref|NP_001081106.1| transcription factor A, mitochondrial [Xenopus laevis]
gi|1016758|gb|AAA91456.1| transcription factor A [Xenopus laevis]
Length = 309
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 71/121 (58%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+PL+ Y ++ + R K+ ++ P K++++TK+++ EWK + EK+ E + +
Sbjct: 81 PKRPLSGYLRYSVEQRPKLHKQYPEAKMMDLTKIIALEWKGLASTEKEPYEAVAKADLKK 140
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y + VK+Y + L+P +E R+++ + K++ K+ G+PK+P + F +F+ ++
Sbjct: 141 YREEVKQYREALSPVQLELHREQRRQRLAKRKSVRKKRELTALGRPKRPRSPFNIFMSEH 200
Query: 169 I 169
Sbjct: 201 F 201
>gi|402880797|ref|XP_003903978.1| PREDICTED: transcription factor A, mitochondrial isoform 1 [Papio
anubis]
Length = 237
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 75/130 (57%), Gaps = 2/130 (1%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + +NP+ K E+ + +++ W+++ ++EKK + Y + E+
Sbjct: 50 PKKPVSSYLRFSKEQLPIFRAQNPDAKTTELVRRIAKHWRELPDSEKKVYQEAYKADWEV 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y + + ++ ++LTP I L KE K+ K++ +K + GKPK+P +++ +++ +
Sbjct: 110 YKEEISRFKEQLTPSEITSLEKEILDKRLKRKAVTKRKELIQLGKPKRPRSAYNVYVAER 169
Query: 169 IDKKEYEGKS 178
+E EG S
Sbjct: 170 F--QEAEGDS 177
>gi|116517272|ref|NP_001070857.1| transcription factor A, mitochondrial [Danio rerio]
gi|115528122|gb|AAI24668.1| Zgc:153358 [Danio rerio]
gi|182890840|gb|AAI65544.1| Zgc:153358 protein [Danio rerio]
Length = 277
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 84/160 (52%), Gaps = 12/160 (7%)
Query: 9 GVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIM 68
+F+ +V SC+ P + S +TA T P PK+PLT Y F ++ +
Sbjct: 19 SLFSSASVVRC-SCVAPAIKSFSTA-----TRGP------PKRPLTAYMTFVKDMQPTVS 66
Query: 69 ERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFL 128
++NP+IK ++V + ++++WK + +K+ + + KE Y ++K+ +LTP
Sbjct: 67 KQNPSIKSVDVMRKIAQQWKMLTTEQKQPFQVASLEAKEQYKLALEKFKAQLTPAESAAF 126
Query: 129 RKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
+EK + K++ KK GKPK+P ++F +F+ ++
Sbjct: 127 AEEKRQRVAKRKAIRKKKELNNLGKPKRPRSTFNIFMAEH 166
>gi|149689894|ref|XP_001503432.1| PREDICTED: transcription factor A, mitochondrial-like [Equus
caballus]
Length = 246
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 5/170 (2%)
Query: 1 MALFKLTTGVFTG---GNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYF 57
MAL + GV +G SC + + A + + S L PKKP+T Y
Sbjct: 1 MALLRGVWGVLSGLSKSGADLCASCGSRLRSPFSFAYMPRWFSSALG--SYPKKPMTSYV 58
Query: 58 KFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYH 117
+F + +NP+ K E+ K +++ W+++ ++EKK E+ Y + + Y + + +
Sbjct: 59 RFSKEQLPIFRAQNPDAKNSELIKKIAQVWRELPDSEKKIYEDAYRADWQAYKEEINRLQ 118
Query: 118 DELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
++LTP + L KE K+ KK+ K+ GKPK+P +++ +FI +
Sbjct: 119 EQLTPSQMVSLEKEITQKRLKKKALIKKRELTMLGKPKRPRSAYNIFISE 168
>gi|449280229|gb|EMC87568.1| Transcription factor A, mitochondrial, partial [Columba livia]
Length = 229
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 68/123 (55%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
E+PK+PLT YF+F + +RNP I +E+ + ++ WK++ ++K+ E+ +
Sbjct: 7 ERPKRPLTAYFRFLKEQHAAFRQRNPEIGNVELVRKIAGAWKELPASQKQIYEDARKADW 66
Query: 107 EIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIK 166
+ Y Q + Y +LTP L++E+ + K+ +++ GKPK+P + F +F+
Sbjct: 67 QKYQQQLAMYKAQLTPAQAAALKEERRRRLAKRRLFRVRRELTVLGKPKRPRSGFNIFVS 126
Query: 167 DNI 169
+N
Sbjct: 127 ENF 129
>gi|213623420|gb|AAI69721.1| Unknown (protein for MGC:196448) [Xenopus laevis]
Length = 283
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 71/121 (58%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+PL+ Y ++ + R K+ ++ P K++++TK+++ EWK + EK+ E + +
Sbjct: 55 PKRPLSGYLRYSVEQRPKLHKQYPEAKMMDLTKIIALEWKGLASTEKEPYEAVAKADLKK 114
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y + VK+Y + L+P +E R+++ + K++ K+ G+PK+P + F +F+ ++
Sbjct: 115 YREEVKQYREALSPVQLELHREQRRQRLAKRKSVRKKRELTALGRPKRPRSPFNIFMSEH 174
Query: 169 I 169
Sbjct: 175 F 175
>gi|355723900|gb|AES08043.1| transcription factor A, mitochondrial [Mustela putorius furo]
Length = 244
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 21/178 (11%)
Query: 1 MALFKLTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLS---IPEK--------P 49
MALF+ V + + S AG + P S +P P
Sbjct: 1 MALFRCVWSVLSA----------LGKSGSDLCAGCGSRLRSPFSFAYVPRCFSSTANSYP 50
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIY 109
KKPLT Y +F + +NP K E+ + +++ W+++ ++EKK E+ Y + + Y
Sbjct: 51 KKPLTSYVRFSKEQLPIFKAQNPAAKNSELIRKIAQLWRELPDSEKKIYEDAYRADWQAY 110
Query: 110 AQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
+ + + ++LTP I L KE + K+ KK+ K+ GKPK+P +++ +FI +
Sbjct: 111 KEEINRIQEQLTPSQIVSLEKEIQQKRLKKKALIKKRELTMLGKPKRPRSAYNIFIAE 168
>gi|444726684|gb|ELW67206.1| Transcription factor A, mitochondrial [Tupaia chinensis]
Length = 227
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 70/120 (58%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP+T Y +F + ++P+ K E+ + ++E W+++ E+EKK E+ Y + +
Sbjct: 50 PKKPMTSYLRFSKEQLPIFKAQDPDAKNSELIRKIAELWRELPESEKKIYEDAYRADWQA 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y + + + H++LTP + L KE K+ KK+ K+ GKPK+P +++ +F+ ++
Sbjct: 110 YKEEINRIHEQLTPSQVLSLEKEIMQKRLKKKALIKKRELTMLGKPKRPRSAYNIFVSES 169
>gi|410930380|ref|XP_003978576.1| PREDICTED: transcription factor A, mitochondrial-like [Takifugu
rubripes]
Length = 279
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 80/160 (50%), Gaps = 6/160 (3%)
Query: 10 VFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIME 69
F+ + +C++P + L S P PK+PL Y ++ Q + + +
Sbjct: 19 TFSCSSYLTRCTCVLPAPYTTAVKNLSSLPSGP------PKRPLNGYMRYVLQQQPMVSK 72
Query: 70 RNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLR 129
+ P+ K +++ + ++++W+ + +K+ E + +E + +++ Y ++LTP ++
Sbjct: 73 QFPDTKTVDIMRKIAQQWRMLSPEQKQPFEEASLQAREQFKVDLQHYREQLTPAQLQQQS 132
Query: 130 KEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNI 169
EK +K +++ K+ GKPK+P + F +F+ +N
Sbjct: 133 AEKRLKMAQRKASRKKRELTSLGKPKRPRSPFNIFMSENF 172
>gi|224052252|ref|XP_002187547.1| PREDICTED: transcription factor A, mitochondrial [Taeniopygia
guttata]
Length = 277
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 10/184 (5%)
Query: 3 LFKLTTG---VFTGGNVFNLR---SCLMPHLNSVTTAG--LKQQTSQPLSIPEKPKKPLT 54
L T G + GG LR + ++ +V AG ++ S+ S ++PK+PLT
Sbjct: 4 LLVATAGGRRLLRGGTGAGLRQRGAGILLDGAAVCRAGGAAERCLSRGTSSSQRPKRPLT 63
Query: 55 PYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVK 114
YF+F R E+NP + E+ K ++ W+++ ++K+ E + + Y + +
Sbjct: 64 AYFRFVMDNRPAFREKNPEVSNTELIKKLAGAWRELPASQKQVYEEALKTDWKRYGEQMA 123
Query: 115 KYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDKKEY 174
Y +LTP L++E+ + ++ K+ GKPK+ + F +F+ +N +E
Sbjct: 124 AYKAQLTPAQAAALKEERRKQLARRRSIRAKRELSLLGKPKRARSGFNIFLSENF--QES 181
Query: 175 EGKS 178
EG S
Sbjct: 182 EGSS 185
>gi|426255984|ref|XP_004021627.1| PREDICTED: transcription factor A, mitochondrial-like [Ovis aries]
Length = 246
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Query: 1 MALFKLTTGVFT--GGNVFNLRSCLMPHLNS-VTTAGLKQQTSQPLSIPEKPKKPLTPYF 57
MAL + GV G + +L + L S + A + + S LS PKKP+T Y
Sbjct: 1 MALLRGVWGVLNALGKSGADLCAGCGSRLRSPFSFAYVPKWFSSSLS--GYPKKPMTSYV 58
Query: 58 KFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYH 117
+F + +NP+ K E+ K +++ W+++ ++EKK E+ Y + ++Y + + +
Sbjct: 59 RFSKEQLPIFKAQNPDAKNSELIKKIAKLWRELPDSEKKIYEDAYRADWQVYKEEINRIQ 118
Query: 118 DELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
++LTP I L KE K+ KK+ K+ GKPK+P +++ +FI +
Sbjct: 119 EQLTPSQIVSLEKEIMQKRLKKKALIKKRELTMLGKPKRPRSAYNIFIAE 168
>gi|229366870|gb|ACQ58415.1| Transcription factor A, mitochondrial precursor [Anoplopoma
fimbria]
Length = 293
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 16/180 (8%)
Query: 1 MALFKLTTG----------VFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPK 50
MA F L T V + N + ++P L Q S P PK
Sbjct: 1 MAPFSLVTASVSWLAKSFSVLSSTNTLARCASVLPSAYVNPVRCLTSQASGP------PK 54
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
+PL Y ++ Q + I NP IK +++ + ++++W+ + +K+ E +E +
Sbjct: 55 RPLNGYLRYVLQQQPVITRHNPEIKSVDIIRKIAQQWRTMSPEQKRPFEEASVLAREQFK 114
Query: 111 QNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNID 170
+++ Y +LTP ++ +EK + K++ K+ GKPK+P + F +F+ ++ +
Sbjct: 115 VDLQHYQAQLTPAQVQQQAQEKRQRMAKRKAIRKKRELNNLGKPKRPRSPFNIFMSEHFE 174
>gi|1575501|gb|AAC52816.1| mitochondrial transcription factor A [Mus musculus]
gi|148700006|gb|EDL31953.1| transcription factor A, mitochondrial, isoform CRA_a [Mus musculus]
Length = 215
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 73/126 (57%)
Query: 44 SIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
S+ PKKP++ Y +F + K ++P+ K+ E+ + ++ W+++ EAEKK E ++
Sbjct: 16 SMGSYPKKPMSSYLRFSTEQLPKFKAKHPDAKLSELVRKIAALWRELPEAEKKVYEADFK 75
Query: 104 KEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYL 163
E + Y + V KY ++LTP + + KE ++ KK+ ++ GKPK+P +++ +
Sbjct: 76 AEWKAYKEAVSKYKEQLTPSQLMGMEKEARQRRLKKKALVKRRELILLGKPKRPRSAYNI 135
Query: 164 FIKDNI 169
++ ++
Sbjct: 136 YVSESF 141
>gi|167384542|ref|XP_001736998.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900416|gb|EDR26737.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 112
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 24 MPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLV 83
MP N+ T+ + + P +PK+P TPYF + + R I E +P+ K+ E+ K+
Sbjct: 1 MPKGNTKTSKAKNTKDKKAKKDPNRPKRPQTPYFLYLHEHRASIKEEHPDAKVTEIAKIA 60
Query: 84 SEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKY 116
SE+WK +GE EKK + + KE Y ++++KY
Sbjct: 61 SEQWKALGEEEKKEYQAKADAAKEQYKKDMEKY 93
>gi|302699233|ref|NP_001181871.1| transcription factor A, mitochondrial precursor [Pan troglodytes]
Length = 246
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 70/121 (57%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + K +NP+ K E+ + +++ W+++ +++KK ++ Y E ++
Sbjct: 50 PKKPVSSYLRFSKEQLPKFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y + + ++ ++LTP I L KE K K++ KK GKPK+P +++ +++ +
Sbjct: 110 YKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKRPRSAYNVYVAER 169
Query: 169 I 169
Sbjct: 170 F 170
>gi|197101131|ref|NP_001124767.1| transcription factor A, mitochondrial [Pongo abelii]
gi|55725824|emb|CAH89692.1| hypothetical protein [Pongo abelii]
Length = 284
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + +NP+ K E+ + +++ W+++ +++KK ++ Y E ++
Sbjct: 88 PKKPISSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 147
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y + + ++ ++LTP I L KE K K++ KK GKPK+P +++ +++ +
Sbjct: 148 YKEEISRFKEQLTPSQIMSLEKEITDKHLKRKAMAKKKELTLLGKPKRPRSAYNVYVAER 207
Query: 169 IDKKEYEGKS 178
+E +G S
Sbjct: 208 F--QEVQGDS 215
>gi|74180039|dbj|BAE36556.1| unnamed protein product [Mus musculus]
Length = 243
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 90/173 (52%), Gaps = 10/173 (5%)
Query: 1 MALFKLTTGVFTGGNVFNLRSCL-----MPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTP 55
MALF+ V + C +P +S++ + + S S+ PKKP++
Sbjct: 1 MALFRGMWSVLKALGRTGVEMCAGCGGRIP--SSISLVCIPKCFS---SMGSYPKKPMSS 55
Query: 56 YFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKK 115
Y +F + K ++P+ K+ E+ + ++ W+++ EA+KK E ++ E + Y + V K
Sbjct: 56 YLRFSTEQLPKFKAKHPDAKLSELVRKIAALWRELPEAKKKVYEADFKAEWKAYKEAVSK 115
Query: 116 YHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y ++LTP + + KE ++ KK+ ++ GKPK+P +++ +++ ++
Sbjct: 116 YKEQLTPSQLMGMEKEARQRRLKKKALVKRRELILLGKPKRPRSAYNIYVSES 168
>gi|321472520|gb|EFX83490.1| hypothetical protein DAPPUDRAFT_301929 [Daphnia pulex]
Length = 261
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 80/154 (51%), Gaps = 22/154 (14%)
Query: 25 PHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQ-------GQIRNKIMERNPNIKII 77
P + SV A + + L PE+PKKPL PY + + K++ R
Sbjct: 21 PLIISVNYATKRLSIEEKLGFPERPKKPLPPYIDYCQKKFAEFSNVSQKVLPR------- 73
Query: 78 EVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEA----IEFLRKEKE 133
E+ +EEWK I + K +L NEY ++ + Y +++Y+ LT EA +E +R EK+
Sbjct: 74 EIIPKFAEEWKLIDKETKTKLMNEYREKLQKYPDALQQYYLSLT-EAQRLELETVRNEKD 132
Query: 134 VKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
QK R+++ R+TGKP +P N F +F+K+
Sbjct: 133 ASAQK---RKLRLENRKTGKPIRPVNQFGIFVKE 163
>gi|431904201|gb|ELK09623.1| Transcription factor A, mitochondrial [Pteropus alecto]
Length = 245
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 8/123 (6%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP+T Y +F + +NP+ K E+ K ++E W+++ E+EKK E+ Y + +
Sbjct: 50 PKKPMTSYVRFSKEQLPIFKAQNPDAKNSELIKKIAELWRELPESEKKVYEDAYKADWQA 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKK----EKREMKKLFRETGKPKKPGNSFYLF 164
Y + + + ++LTP + L KE K+ KK +KRE+ L GKPK+P +++ +F
Sbjct: 110 YKEEINRIQEQLTPSQMVSLEKEIMQKRLKKKAIIKKRELTML----GKPKRPRSAYNIF 165
Query: 165 IKD 167
I +
Sbjct: 166 ISE 168
>gi|410975149|ref|XP_003993997.1| PREDICTED: transcription factor A, mitochondrial [Felis catus]
Length = 246
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 21/178 (11%)
Query: 1 MALFKLTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLS-----------IPEKP 49
MALF+ V + C AG + P S + P
Sbjct: 1 MALFRGVWSVLSALGKSGADLC----------AGCGSRLRSPFSFAYVPRCFSSTVNSYP 50
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIY 109
KKPLT Y +F + +NP+ K E+ + +++ W+++ ++EKK E+ Y + + Y
Sbjct: 51 KKPLTSYVRFSKEQLPIFKAQNPDAKNSELIRKIAQLWRELPDSEKKIYEDAYRADWQAY 110
Query: 110 AQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
+ + + ++LTP I L KE + K+ KK+ K+ GKPK+P +++ ++I +
Sbjct: 111 KEEINRIQEQLTPSQIVSLEKEIQQKRLKKKALIKKRELTMLGKPKRPRSAYNIYIAE 168
>gi|403274131|ref|XP_003928841.1| PREDICTED: transcription factor A, mitochondrial [Saimiri
boliviensis boliviensis]
Length = 423
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 70/125 (56%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + + +NP+ K E+ ++++E W+++ E+EKK E+ +
Sbjct: 226 PKKPVSSYIRFSQEQLPILKAQNPDAKTTELVRMIAERWRELPESEKKIYEDASRAAWVV 285
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y + V + ++LTP I L+KE K +++ KK GKPKK ++F +++ ++
Sbjct: 286 YREEVNRIEEQLTPCQITSLKKEMVHKNLRRKLTLRKKELSLLGKPKKARSAFNIYVAEH 345
Query: 169 IDKKE 173
+ E
Sbjct: 346 FQETE 350
>gi|193880|gb|AAA02579.1| HMG box protein [Mus musculus]
gi|148700008|gb|EDL31955.1| transcription factor A, mitochondrial, isoform CRA_c [Mus musculus]
Length = 199
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 71/121 (58%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + K ++P+ K+ E+ + ++ W+++ EAEKK E ++ E +
Sbjct: 5 PKKPMSSYLRFSTEQLPKFKAKHPDAKLSELVRKIAALWRELPEAEKKVYEADFKAEWKA 64
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y + V KY ++LTP + + KE ++ KK+ ++ GKPK+P +++ +++ ++
Sbjct: 65 YKEAVSKYKEQLTPSQLMGMEKEARQRRLKKKALVKRRELILLGKPKRPRSAYNIYVSES 124
Query: 169 I 169
Sbjct: 125 F 125
>gi|209732208|gb|ACI66973.1| Transcription factor A, mitochondrial precursor [Salmo salar]
Length = 267
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Query: 2 ALFKLTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQG 61
L K + +F+ + ++P + S TT S PK+PL Y +F
Sbjct: 10 GLLKKSFSLFSDASCLTRLVNVIPAVKSFTT-----------SAGAPPKRPLNGYMRFVK 58
Query: 62 QIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELT 121
Q + ++ P++K ++V + ++ +W+ + +K+ + +E + ++++Y +LT
Sbjct: 59 QQQPLVVREYPDVKAVDVIRKIAHQWRTLTADQKQPFQQASVDAREQFKVDMQRYQSQLT 118
Query: 122 PEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
P L++E+ + K++ K+ GKPK+P +SF +F+
Sbjct: 119 PAQAAALKQERRRRLAKRKAIRRKRELNSLGKPKRPRSSFNIFM 162
>gi|73953051|ref|XP_546107.2| PREDICTED: transcription factor A, mitochondrial [Canis lupus
familiaris]
Length = 246
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 68/119 (57%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKPLT Y +F + +NP+ K E+ + +++ W+++ E+EKK E+ Y + +
Sbjct: 50 PKKPLTSYVRFSKEQLPIFKAQNPDAKNSELIRKIAQLWRELPESEKKIYEDAYRADWQA 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
Y + + + ++LTP I L KE K+ KK+ K+ GKPK+P +++ +FI +
Sbjct: 110 YKEEINRIQEQLTPSQIMSLEKEILQKRLKKKALIKKRELTMLGKPKRPRSAYNIFIAE 168
>gi|119574556|gb|EAW54171.1| transcription factor A, mitochondrial, isoform CRA_a [Homo sapiens]
Length = 237
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + +NP+ K E+ + +++ W+++ +++KK ++ Y E ++
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y + + ++ ++LTP I L KE K K++ KK GKPK+P +++ +++ +
Sbjct: 110 YKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKRPRSAYNVYVAER 169
Query: 169 IDKKEYEGKS 178
+E +G S
Sbjct: 170 F--QEAKGDS 177
>gi|291404341|ref|XP_002718409.1| PREDICTED: transcription factor A-like [Oryctolagus cuniculus]
Length = 230
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 67/121 (55%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP+T Y +F + +NP K E+ K ++E W+++ ++EKK E+ Y E E
Sbjct: 34 PKKPMTSYLRFSKEQLPIFKAKNPEAKNSELIKRIAELWRELPDSEKKVYEDAYRVEWEA 93
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y + + + + LTP + + KE K+ KK+ K+ GKPK+P +++ +F+ ++
Sbjct: 94 YKEEISRIQEHLTPSQMLSMEKEIMQKRLKKKALMKKRELTMLGKPKRPRSAYNIFVSES 153
Query: 169 I 169
Sbjct: 154 F 154
>gi|296471997|tpg|DAA14112.1| TPA: transcription factor A, mitochondrial precursor [Bos taurus]
gi|440896556|gb|ELR48454.1| Transcription factor A, mitochondrial [Bos grunniens mutus]
Length = 246
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Query: 1 MALFKLTTGVFT--GGNVFNLRSCLMPHLNS-VTTAGLKQQTSQPLSIPEKPKKPLTPYF 57
MAL + GV G + +L + L S + A + + S LS PKKP+T Y
Sbjct: 1 MALLRGVWGVLNALGKSGADLCAGCGSRLRSPFSFAYVPKWFSSSLS--GYPKKPMTSYV 58
Query: 58 KFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYH 117
+F + +NP+ K E+ K +++ W+++ ++EKK E+ Y + ++Y + + +
Sbjct: 59 RFSKEQLPIFKAQNPDAKNSELIKKIAKLWRELPDSEKKIYEDAYRADWQVYKEEINRIQ 118
Query: 118 DELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
++LTP + L KE K+ KK+ K+ GKPK+P +++ +FI +
Sbjct: 119 EQLTPSQMVSLEKEIMQKRLKKKALIKKRELTMLGKPKRPRSAYNIFIAE 168
>gi|402881454|ref|XP_003904286.1| PREDICTED: transcription factor A, mitochondrial-like [Papio
anubis]
Length = 248
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 69/119 (57%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + +NP+ K E+ + +++ W+++ ++EKK Y + E+
Sbjct: 50 PKKPVSSYLRFSKEQLPIFRAQNPDAKTTELVRRIAKHWRELPDSEKKVYREAYKADWEV 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
Y + + ++ ++LTP I L KE K+ K++ +K + GKPK+P +++ +++ +
Sbjct: 110 YKEEISRFKEQLTPSEITSLEKEILDKRLKRKAVTKRKELIQLGKPKRPRSAYNIYVAE 168
>gi|47115243|emb|CAG28581.1| TFAM [Homo sapiens]
Length = 246
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 88/172 (51%), Gaps = 5/172 (2%)
Query: 1 MALFKLTTGVFT--GGNVFNLRSCLMPHLNS-VTTAGLKQQTSQPLSIPEKPKKPLTPYF 57
MA + GV T G + L + L S + A L + S L+ PKKP++ Y
Sbjct: 1 MAFLRSMWGVLTALGRSGAELCTGCGSRLRSPFSFAYLPRWFSSVLA--SCPKKPVSSYL 58
Query: 58 KFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYH 117
+F + +NP+ K E+ + +++ W+++ +++KK ++ Y E ++Y + + ++
Sbjct: 59 RFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFK 118
Query: 118 DELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNI 169
++LTP I L KE K K++ KK GKPK+P +++ +++ +
Sbjct: 119 EQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKRPRSAYNVYVAERF 170
>gi|351707159|gb|EHB10078.1| Transcription factor A, mitochondrial [Heterocephalus glaber]
Length = 228
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP+ Y +F + N + + P +K+ E+ K + E+WK++ +AEKK E+ Y +E +
Sbjct: 50 PKKPVNSYIRFTREKMNILRAQYPELKVTELAKRLGEQWKELSDAEKKMYEDAYKEEWKA 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y + V + H+ LTP + L + + + K E+ KK GKPK+ ++ +F+ +
Sbjct: 110 YREEVNRIHEVLTPAERKSLVESRAQRFFKGERVIKKKELLMLGKPKRARTAYNIFLSEY 169
Query: 169 I 169
+
Sbjct: 170 L 170
>gi|344274550|ref|XP_003409078.1| PREDICTED: transcription factor A, mitochondrial-like [Loxodonta
africana]
Length = 248
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 67/120 (55%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKPL+ Y +F + +NP+ K E+ K +++ W+ + ++EKK E+ Y + +
Sbjct: 50 PKKPLSSYLRFSTEQLPIFKAQNPDAKNSELIKKIAQLWRDLPDSEKKVYEDAYRADWQA 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y + V + ++LTP I + KE K+ K++ K+ GKPK+P ++ +FI ++
Sbjct: 110 YKEEVNRIQEQLTPSQIVSMEKEIMQKRLKRKALIKKRELTMLGKPKRPRTAYNIFISES 169
>gi|209735516|gb|ACI68627.1| Transcription factor A, mitochondrial precursor [Salmo salar]
Length = 267
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 11/166 (6%)
Query: 2 ALFKLTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQG 61
L K + G+F+ + ++P + S TT S PK+PL Y +F
Sbjct: 10 GLLKKSLGLFSDASSLIRVVNVIPAVKSFTT-----------SAGAPPKRPLNGYMRFVK 58
Query: 62 QIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELT 121
Q + ++ P++K ++V + ++ +W+ + +K+ + +E + ++++Y +LT
Sbjct: 59 QQQPLVVREYPDVKAVDVIRKIAHQWRTLTADQKQPFQQLSVVAREQFKVDMQRYQSQLT 118
Query: 122 PEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
P L++E+ + K++ K+ GKPK+P +SF +F+ +
Sbjct: 119 PAQAAALKQERRRRLAKRKAIRRKRELNSLGKPKRPRSSFNIFMAE 164
>gi|395501488|ref|XP_003755126.1| PREDICTED: transcription factor A, mitochondrial [Sarcophilus
harrisii]
Length = 208
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 73/125 (58%)
Query: 44 SIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
++ PKKPL+ Y +F + R + E+NP++K E+ K ++E W+++ +++KK E
Sbjct: 5 TLSNAPKKPLSAYIRFTMEHRPLLKEQNPDLKSTEIIKKLAEAWRELPQSKKKVYEEATK 64
Query: 104 KEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYL 163
E E+Y + KY EL + L++EK K+ +KE + K+ GKPKKP + + +
Sbjct: 65 AEFEVYKEENSKYIAELNHAEKKNLKEEKRRKRVRKEIIKKKRELTIFGKPKKPRSGYNI 124
Query: 164 FIKDN 168
FI ++
Sbjct: 125 FISEH 129
>gi|354474051|ref|XP_003499245.1| PREDICTED: transcription factor A, mitochondrial-like [Cricetulus
griseus]
Length = 224
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 69/121 (57%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP+T Y +F + + ++P+ K+ ++ + ++ W+++ E EKK E ++ + +
Sbjct: 31 PKKPMTSYLRFSTEQLPRFKAKHPDAKLSDLVRKIAAAWRELPEEEKKVYEADFRADWKA 90
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y + + K+ D+LTP + KE K+ KK+ K+ GKPK+P +++ +++ ++
Sbjct: 91 YKEALSKFKDQLTPAQLVSFEKEVRQKRLKKKASVKKRELMLLGKPKRPRSAYNIYVSES 150
Query: 169 I 169
Sbjct: 151 F 151
>gi|356624619|pdb|3TMM|A Chain A, Tfam Imposes A U-Turn On Mitochondrial Dna
Length = 238
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 68/117 (58%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + +NP+ K E+ + +++ W+++ +++KK ++ Y E ++
Sbjct: 42 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 101
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
Y + + ++ ++LTP I L KE K K++ KK GKPK+P +++ +++
Sbjct: 102 YKEEISRFKEQLTPSQIXSLEKEIXDKHLKRKAXTKKKELTLLGKPKRPRSAYNVYV 158
>gi|145536343|ref|XP_001453899.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421632|emb|CAK86502.1| unnamed protein product [Paramecium tetraurelia]
Length = 236
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PKKPLT +F F + R K++ERNP IK+ +++++ +W + E EKK ++Y
Sbjct: 49 PNAPKKPLTAFFLFNQKYRQKVVERNPEIKLTQISQMAGNKWTSMSEQEKKPYLDQYNAA 108
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKE 133
KE Y Q +K Y+++ E + RK+ E
Sbjct: 109 KEKYDQELKDYNEKNGIETNDKKRKKSE 136
>gi|167396118|ref|XP_001741910.1| non-histone chromosomal protein [Entamoeba dispar SAW760]
gi|165893321|gb|EDR21615.1| non-histone chromosomal protein, putative [Entamoeba dispar SAW760]
Length = 111
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%)
Query: 24 MPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLV 83
MP N+ T+ + + P +PKKP + YF + + R I E +P+IK E++K+
Sbjct: 1 MPKGNTKTSKAKNTKDKKAKKDPNRPKKPQSAYFLYLNEHRASIKEEHPDIKFTEISKVA 60
Query: 84 SEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKY 116
SE+WK +GE EKK + + +E Y ++++KY
Sbjct: 61 SEQWKALGEEEKKEYQAKADAAREQYKKDMEKY 93
>gi|156151422|ref|NP_001029188.2| transcription factor A, mitochondrial precursor [Bos taurus]
gi|121956669|sp|Q0II87.1|TFAM_BOVIN RecName: Full=Transcription factor A, mitochondrial; Short=mtTFA;
Flags: Precursor
gi|113911921|gb|AAI22755.1| Transcription factor A, mitochondrial [Bos taurus]
Length = 246
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 71/124 (57%)
Query: 44 SIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
S+ PKKP+T Y +F + +NP+ K E+ K +++ W+++ ++EKK E+ Y
Sbjct: 45 SLSGYPKKPMTSYVRFSKEQLPIFKAQNPDAKNSELIKKIAKLWRELPDSEKKIYEDAYR 104
Query: 104 KEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYL 163
+ ++Y + + + ++LTP + L KE K+ KK+ K+ GKPK+P +++ +
Sbjct: 105 ADWQVYKEEINRIQEQLTPSQMVSLEKEIMQKRLKKKALIKKRELTMLGKPKRPRSAYNI 164
Query: 164 FIKD 167
FI +
Sbjct: 165 FIAE 168
>gi|45383910|ref|NP_989431.1| transcription factor A, mitochondrial [Gallus gallus]
gi|23821364|dbj|BAC20950.1| mitochondrial transcription factor A [Gallus gallus]
gi|53130616|emb|CAG31637.1| hypothetical protein RCJMB04_9a18 [Gallus gallus]
Length = 262
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 70/133 (52%)
Query: 39 TSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRL 98
+ +S E+PK+PL+ YF+F + ++NP + +E+ K ++ W+++ ++K+
Sbjct: 35 CCRAMSSAERPKRPLSAYFRFLRDNQPAFRQQNPELNSLELVKKLAGVWRELPASQKQVY 94
Query: 99 ENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPG 158
E + Y + + Y +LTP L++E+ + K+ +K+ GKPK+P
Sbjct: 95 EEARKTDWRKYEEQLAAYKAQLTPAQAAALKEERRKRLAKRRSFRIKRELTVLGKPKRPR 154
Query: 159 NSFYLFIKDNIDK 171
+ F +F+ +N +
Sbjct: 155 SGFNIFVSENFQQ 167
>gi|397501069|ref|XP_003821221.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor A,
mitochondrial [Pan paniscus]
Length = 284
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 69/119 (57%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + +NP+ K E+ K +++ W+++ +++KK ++ Y E ++
Sbjct: 88 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIKRIAQRWRELPDSKKKIYQDAYRAEWQV 147
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
Y + + ++ ++LTP I L KE K K++ KK GKPK+P +++ +++ +
Sbjct: 148 YKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKXLTLLGKPKRPRSAYNVYVAE 206
>gi|67484144|ref|XP_657292.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474548|gb|EAL51913.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 114
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 49/73 (67%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +PK+P TPYF + + R I E +P+I+ E++K+ SE+WK +GE EKK + +
Sbjct: 26 PNRPKRPPTPYFIYLNEHRASIKEEHPDIRFTEISKVASEQWKALGEEEKKEYQTKADAA 85
Query: 106 KEIYAQNVKKYHD 118
KE Y ++++KY++
Sbjct: 86 KEQYKKDMEKYNN 98
>gi|197692183|dbj|BAG70055.1| mitochondrial transcription factor A [Homo sapiens]
gi|197692433|dbj|BAG70180.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349644|gb|ADP92007.1| mitochondrial transcription factor A [Homo sapiens]
Length = 246
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 69/121 (57%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + +NP+ K E+ + +++ W+++ +++KK ++ Y E ++
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y + + ++ ++LTP I L KE K K++ KK GKPK+P +++ +++ +
Sbjct: 110 YKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKRPRSAYNVYVAER 169
Query: 169 I 169
Sbjct: 170 F 170
>gi|4507401|ref|NP_003192.1| transcription factor A, mitochondrial isoform 1 precursor [Homo
sapiens]
gi|426364808|ref|XP_004049486.1| PREDICTED: transcription factor A, mitochondrial isoform 1 [Gorilla
gorilla gorilla]
gi|417324|sp|Q00059.1|TFAM_HUMAN RecName: Full=Transcription factor A, mitochondrial; Short=mtTFA;
AltName: Full=Mitochondrial transcription factor 1;
Short=MtTF1; AltName: Full=Transcription factor 6;
Short=TCF-6; AltName: Full=Transcription factor 6-like
2; Flags: Precursor
gi|619859|gb|AAA59849.1| mitochondrial transcription factor 1 [Homo sapiens]
gi|54696184|gb|AAV38464.1| transcription factor A, mitochondrial [Homo sapiens]
gi|54696186|gb|AAV38465.1| transcription factor A, mitochondrial [Homo sapiens]
gi|61358678|gb|AAX41606.1| transcription factor A mitochondrial [synthetic construct]
gi|61358685|gb|AAX41607.1| transcription factor A mitochondrial [synthetic construct]
gi|116496711|gb|AAI26367.1| Transcription factor A, mitochondrial [Homo sapiens]
gi|119574558|gb|EAW54173.1| transcription factor A, mitochondrial, isoform CRA_c [Homo sapiens]
gi|119574560|gb|EAW54175.1| transcription factor A, mitochondrial, isoform CRA_c [Homo sapiens]
gi|161579137|gb|ABX72056.1| mitochondrial transcription factor A [Homo sapiens]
gi|189069117|dbj|BAG35455.1| unnamed protein product [Homo sapiens]
gi|208967953|dbj|BAG73815.1| mitochondrial transcription factor A [synthetic construct]
gi|311349578|gb|ADP91974.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349580|gb|ADP91975.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349582|gb|ADP91976.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349584|gb|ADP91977.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349586|gb|ADP91978.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349588|gb|ADP91979.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349590|gb|ADP91980.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349592|gb|ADP91981.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349594|gb|ADP91982.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349596|gb|ADP91983.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349598|gb|ADP91984.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349600|gb|ADP91985.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349602|gb|ADP91986.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349604|gb|ADP91987.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349606|gb|ADP91988.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349608|gb|ADP91989.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349610|gb|ADP91990.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349612|gb|ADP91991.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349614|gb|ADP91992.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349616|gb|ADP91993.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349618|gb|ADP91994.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349620|gb|ADP91995.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349622|gb|ADP91996.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349624|gb|ADP91997.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349626|gb|ADP91998.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349628|gb|ADP91999.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349630|gb|ADP92000.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349632|gb|ADP92001.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349634|gb|ADP92002.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349636|gb|ADP92003.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349638|gb|ADP92004.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349640|gb|ADP92005.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349642|gb|ADP92006.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349646|gb|ADP92008.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349648|gb|ADP92009.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349650|gb|ADP92010.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349652|gb|ADP92011.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349654|gb|ADP92012.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349656|gb|ADP92013.1| mitochondrial transcription factor A [Homo sapiens]
gi|313884046|gb|ADR83509.1| transcription factor A, mitochondrial [synthetic construct]
gi|410214676|gb|JAA04557.1| transcription factor A, mitochondrial [Pan troglodytes]
gi|410252846|gb|JAA14390.1| transcription factor A, mitochondrial [Pan troglodytes]
gi|410290500|gb|JAA23850.1| transcription factor A, mitochondrial [Pan troglodytes]
gi|410349391|gb|JAA41299.1| transcription factor A, mitochondrial [Pan troglodytes]
Length = 246
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 69/121 (57%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + +NP+ K E+ + +++ W+++ +++KK ++ Y E ++
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y + + ++ ++LTP I L KE K K++ KK GKPK+P +++ +++ +
Sbjct: 110 YKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKRPRSAYNVYVAER 169
Query: 169 I 169
Sbjct: 170 F 170
>gi|301787699|ref|XP_002929265.1| PREDICTED: transcription factor A, mitochondrial-like [Ailuropoda
melanoleuca]
gi|281343623|gb|EFB19207.1| hypothetical protein PANDA_019385 [Ailuropoda melanoleuca]
Length = 246
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 21/176 (11%)
Query: 1 MALFKLTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLS---IP--------EKP 49
MALF+ V + C AG + P S +P P
Sbjct: 1 MALFRGVWSVLSALGKSGADLC----------AGCGSRLRSPFSFAYVPRYFSSTANSYP 50
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIY 109
KKPLT Y +F + +NP+ K E+ + +++ W+++ ++EKK E+ Y + + Y
Sbjct: 51 KKPLTSYVRFSKEQLPIFKAQNPDAKNSELIRKIAQLWRELPDSEKKIYEDAYRADWQAY 110
Query: 110 AQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
+ + + ++LTP I L KE K+ K++ K+ GKPK+P +++ +FI
Sbjct: 111 KEEINRIQEQLTPSQIVSLEKEILQKRLKRKALIKKRELTMLGKPKRPRSAYNIFI 166
>gi|17221614|dbj|BAB78468.1| mitochondrial transcription factor A [Gallus gallus]
Length = 264
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 6 LTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRN 65
LT GV R C + AG + +S E+PK+PL+ YF+F +
Sbjct: 18 LTVGVAR-------RGC---GIGRAAEAG----CCRAMSSAERPKQPLSAYFRFLRDNQP 63
Query: 66 KIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAI 125
++NP + +E+ K ++ W+++ ++K+ E + Y + + Y +LTP
Sbjct: 64 AFRQQNPELNSLELVKKLAGVWRELPASQKQVYEEARKTDWRKYEEQLAAYKAQLTPAQA 123
Query: 126 EFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
L++E+ + K+ +K+ GKPK+P + F +F+ +N +
Sbjct: 124 AALKEERRKRLAKRRSFRIKRELTVLGKPKRPRSGFNIFVSENFQQ 169
>gi|307189940|gb|EFN74176.1| Transcription factor A, mitochondrial [Camponotus floridanus]
Length = 192
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 64/106 (60%)
Query: 63 IRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTP 122
+++K+ + PN IE+ K V+E+W ++ K+ L+ +Y ++ +Y Q + +Y + +T
Sbjct: 7 VKDKLHKEYPNYTQIEIIKKVAEQWSQVDPTIKQNLQKQYMEQSSVYKQKLMEYKNSITD 66
Query: 123 EAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
+ +++E K+ EK ++K+ E GKPK+P +F LF++DN
Sbjct: 67 DQQMLIKQELIKKEHALEKSQIKQKLAELGKPKRPLTAFVLFMQDN 112
>gi|345323380|ref|XP_001507921.2| PREDICTED: transcription factor A, mitochondrial-like
[Ornithorhynchus anatinus]
Length = 320
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 87/166 (52%), Gaps = 11/166 (6%)
Query: 7 TTGVFTGG--NVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIR 64
T+G GG +L C P + ++T+ + +PK+PL+ Y +F Q +
Sbjct: 77 TSGGKEGGRPGPRSLLPCPTPFKTTTKNLWFSEETT----LSHRPKQPLSAYLRFVVQRQ 132
Query: 65 NKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTP-E 123
+ ++NP IK+ EV K +++ W+++ AEKK E ++ Y + + K+ P +
Sbjct: 133 SMYKQQNPEIKMTEVIKKIAQAWRELPAAEKKVYEEAANEDWMAYKEELAKFKATSVPLQ 192
Query: 124 AIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNI 169
+ KE+K + + K+E+++L G+PK+P +++ +F+ + +
Sbjct: 193 KVPLKTHSKELKSKSERKKELRRL----GRPKRPHSAYNIFVVERL 234
>gi|118344358|ref|NP_001072002.1| transcription factor protein [Ciona intestinalis]
gi|70570502|dbj|BAE06613.1| transcription factor protein [Ciona intestinalis]
Length = 263
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 76/130 (58%), Gaps = 5/130 (3%)
Query: 39 TSQPLS---IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK 95
S P+S I +PK+PLT +F F G+ R + + +++ EVTK+ +EEWK++ E EK
Sbjct: 20 CSHPVSFYSIQNRPKRPLTSFFLFLGEKRKQ--PQYAGLRVYEVTKVAAEEWKQMDENEK 77
Query: 96 KRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPK 155
+ +E + + ++Y ++L+ I L+ ++ K+++KEK+ K++ G+PK
Sbjct: 78 QPYVDEMKASFSTFHERYQEYLNQLSDLEIHDLKIDRMTKREEKEKKRQKQMKLRLGEPK 137
Query: 156 KPGNSFYLFI 165
+ +++ F+
Sbjct: 138 RARSAYTFFM 147
>gi|322795409|gb|EFZ18174.1| hypothetical protein SINV_09324 [Solenopsis invicta]
Length = 354
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 44 SIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
S+P KPK+P + ++ +++K+ P+ K E+ K SE+W ++ K+ L+ Y
Sbjct: 47 SLPSKPKRPPNVFLQYYSSVKDKLQAEYPHYKPKELVKKASEKWTQVDPTIKQNLQKLYH 106
Query: 104 KEKEIYAQNVKKYHDELTPE-----AIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPG 158
++ IY Q + Y + LT + + LRK KK E+K+ E GKPK+P
Sbjct: 107 EQTFIYKQKLMDYENSLTDKQKVEIVQDLLRKGHSAKKA-----EIKRKLTELGKPKRPL 161
Query: 159 NSFYLFIKD 167
++F LF+++
Sbjct: 162 SAFMLFLQN 170
>gi|242007100|ref|XP_002424380.1| transcription factor A, putative [Pediculus humanus corporis]
gi|212507780|gb|EEB11642.1| transcription factor A, putative [Pediculus humanus corporis]
Length = 212
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 74/124 (59%), Gaps = 10/124 (8%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMER--NPNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
L++PE+PK+P+TP+ +F NK+++ + N+ EV K++S +W I E EK L+
Sbjct: 16 LNLPEQPKRPVTPFLEFS----NKMLKNYASSNLPHSEVRKIISSKWNDISEEEKMALKE 71
Query: 101 EYAKEKEIYAQNVKKYHDELTPE---AIEFLRKEKEVKKQKKEKREMK-KLFRETGKPKK 156
EY K Y ++++ Y + LT E +IE KE ++ +++K + ++ K R+ KPKK
Sbjct: 72 EYKKSYAKYKEDLQNYENSLTDEQKKSIEIAEKELKLNQEQKIVKNLREKRSRDLDKPKK 131
Query: 157 PGNS 160
P S
Sbjct: 132 PLTS 135
>gi|170068627|ref|XP_001868941.1| brahma-associated protein 111kD [Culex quinquefasciatus]
gi|167864604|gb|EDS27987.1| brahma-associated protein 111kD [Culex quinquefasciatus]
Length = 214
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
Query: 29 SVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWK 88
+ TTA KQ L P+ P+KPL PY ++ ++ + I N ++K+ EV K++ ++W+
Sbjct: 60 TATTAEAKQ-----LKPPKAPEKPLMPYMRYSRKVWDSIKASNSDLKLWEVGKIIGQQWR 114
Query: 89 KIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFL 128
+ E++K+ EY EK Y +N+K YH +P + +L
Sbjct: 115 DLPESDKEEFITEYEAEKLEYEKNLKAYH--ASPAYLAYL 152
>gi|209730906|gb|ACI66322.1| Transcription factor A, mitochondrial precursor [Salmo salar]
Length = 212
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Query: 2 ALFKLTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQG 61
L K + +F+ + ++P + S TT S PK+PL Y +F
Sbjct: 10 GLLKKSLSLFSDASSLIRVVNVIPAVKSFTT-----------SAGAPPKRPLNGYMRFVK 58
Query: 62 QIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELT 121
Q + ++ P++K ++V + ++ +W+ + +K+ + +E + ++++Y +LT
Sbjct: 59 QQQPLVVREYPDVKAVDVIRKIAHQWRTLTADQKQPFQQLSVVAREQFKVDMQRYQSQLT 118
Query: 122 PEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNID 170
P L++E+ + K++ K+ GKPK+P +SF +F+ ++ +
Sbjct: 119 PAQAAALKQERRRRLAKRKAIRRKRELNSLGKPKRPRSSFNIFMAEHFE 167
>gi|209735838|gb|ACI68788.1| Transcription factor A, mitochondrial precursor [Salmo salar]
Length = 267
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Query: 2 ALFKLTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQG 61
L K + +F+ + ++P + S TT S PK+PL Y +F
Sbjct: 10 GLLKKSLSLFSDASSLIRVVNVIPAVKSFTT-----------SAGAPPKRPLNGYMRFVK 58
Query: 62 QIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELT 121
Q + ++ P++K ++V + ++ +W+ + +K+ + +E + ++++Y +LT
Sbjct: 59 QQQPLVVREYPDVKAVDVIRKIAHQWRTLTADQKQPFQQLSVVAREQFKVDMQRYQSQLT 118
Query: 122 PEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNID 170
P L++E+ + K++ K+ GKPK+P +SF +F+ ++ +
Sbjct: 119 PAQAAALKQERRRRLAKRKAIRRKRELNSLGKPKRPRSSFNIFMAEHFE 167
>gi|327283512|ref|XP_003226485.1| PREDICTED: transcription factor A, mitochondrial-like [Anolis
carolinensis]
Length = 274
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 82/143 (57%)
Query: 27 LNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEE 86
L T +++ S+ S +PK+P++ Y +F + ++NP++ I+++TK +++
Sbjct: 20 LRCSPTCSVEKWFSKYFSSDNRPKQPMSAYIRFYKDQQPIYKKQNPDVSILDITKKIAQV 79
Query: 87 WKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKK 146
W+++ ++KK E +++IY + + +Y ELTP L++EK K +K++ K+
Sbjct: 80 WRELPASDKKPYEAAAQTDRQIYKEQMARYKAELTPAEEAALKEEKRRKFKKRKATRKKR 139
Query: 147 LFRETGKPKKPGNSFYLFIKDNI 169
GKPK+P ++F +F+ ++
Sbjct: 140 QLTVLGKPKRPRSAFNIFMSEHF 162
>gi|417397773|gb|JAA45920.1| Putative transcription factor a mitochondrial [Desmodus rotundus]
Length = 245
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP+T Y +F + +NP + E+ K ++E W+++ ++EKK E+ Y + +
Sbjct: 50 PKKPMTSYVRFSKEQLPIFKAQNPGARNSELIKKIAELWRELPDSEKKVYEDAYKADWQA 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
Y Q + + +ELTP L KE K+ KK+ K+ GKPK+P +++ +FI +
Sbjct: 110 YKQELMRIEEELTPSQRVSLEKEMMQKRLKKKSIIKKRELTLLGKPKRPRSAYNIFISE 168
>gi|356523473|ref|XP_003530363.1| PREDICTED: high mobility group B protein 13-like isoform 2 [Glycine
max]
Length = 467
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 71/137 (51%), Gaps = 17/137 (12%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK P++ YF F R + N N +EV K+ SEEWK + E +K+ E K
Sbjct: 264 PLKPKHPMSAYFLFTNDRRAALAAENKNF--LEVPKITSEEWKNMTEEQKRPYEEMAKKN 321
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKE-VKKQKKEKREMKKLFRET------------- 151
KE YA ++ Y + EA F+++E+E +K QK+E ++ K +T
Sbjct: 322 KEQYALEMEAYKQKKDEEAAHFMKEEEEQMKLQKQEALQLLKKKEKTENIIKNKDDKNSD 381
Query: 152 -GKPKKPGNSFYLFIKD 167
+PKKP +SF LF K+
Sbjct: 382 PNRPKKPASSFILFSKE 398
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
+P PY + N+I + NP + E++ ++ +WK + EKK E Y EKE Y
Sbjct: 153 RPSPPYILWMKDQWNEIKKANPEAEFKEISTMLGAKWKTVSAEEKKPYEGIYHAEKEAYL 212
Query: 111 QNVKKYHDE------LTPE-----AIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGN 159
Q + K E L E A+E L + + K++ ++ + K ++ KPK P +
Sbjct: 213 QVIAKEKRETEAMRLLEDEQKQRTAMELLEQYMQFKQEAEKDGKKNKKEKDPLKPKHPMS 272
Query: 160 SFYLFIKDNIDKKEYEGKSYM 180
+++LF D E K+++
Sbjct: 273 AYFLFTNDRRAALAAENKNFL 293
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%)
Query: 44 SIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
S P +PKKP + + F + R + E P I + LVS +WK++ E +++ + +
Sbjct: 380 SDPNRPKKPASSFILFSKEARKTLQEERPGISTSTLNALVSLKWKELSEEDRQFWNGQAS 439
Query: 104 KEKEIYAQNVKKYHDELTPEAIE 126
K + Y + +++Y+ L A +
Sbjct: 440 KAMDAYKKELEEYNKSLAATACQ 462
>gi|355333144|pdb|3TQ6|A Chain A, Crystal Structure Of Human Mitochondrial Transcription
Factor A, Tfam Or Mttfa, Bound To The Light Strand
Promoter Lsp
gi|355333145|pdb|3TQ6|B Chain B, Crystal Structure Of Human Mitochondrial Transcription
Factor A, Tfam Or Mttfa, Bound To The Light Strand
Promoter Lsp
Length = 214
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 68/117 (58%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + +NP+ K E+ + +++ W+++ +++KK ++ Y E ++
Sbjct: 10 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 69
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
Y + + ++ ++LTP I L KE K K++ KK GKPK+P +++ +++
Sbjct: 70 YKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKRPRSAYNVYV 126
>gi|225714700|gb|ACO13196.1| Transcription factor A, mitochondrial precursor [Esox lucius]
Length = 260
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 9 GVFTGGNVFNLRSCL--MPHLNSVT-TAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRN 65
G+F+ NV +L C+ +P + + + TAG PK+PL Y +F Q +
Sbjct: 19 GLFS--NVSSLARCVSVLPAVKTFSSTAG------------APPKRPLNGYMRFPKQQQP 64
Query: 66 KIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAI 125
I+++ P++ ++V + ++++W+ + +K+ E E + + +++ + +LTP
Sbjct: 65 LIVKQYPDVSAVDVVRKIAQQWRALSPEQKQPFEQESVVARAQFKVDLQTFKAQLTPAQT 124
Query: 126 EFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNID 170
L++E+ + K++ K+ GKPK+P + F +++ ++ +
Sbjct: 125 AALKEERRQRLAKRKAIRRKRELNNLGKPKRPRSPFNIYMAEHFE 169
>gi|387019024|gb|AFJ51630.1| Transcription factor A, mitochondrial-like [Crotalus adamanteus]
Length = 244
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 73/143 (51%)
Query: 27 LNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEE 86
L T L++ S+ S PK+PL Y F + R+ ++ P + ++ K +
Sbjct: 22 LRCNVTPSLEKCFSKYFSSDSCPKRPLPSYLAFLNKQRDHYKKKYPELNNQQLMKEIGRI 81
Query: 87 WKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKK 146
W+++ E EK+ E E + Y + + KY EL P L++EK +++Q +++ +KK
Sbjct: 82 WRELPEPEKQHYEAIAKSEWDRYKEQMAKYKSELNPAEEATLKQEKRIRRQIRKEARIKK 141
Query: 147 LFRETGKPKKPGNSFYLFIKDNI 169
GKPKK +SF +F+ ++
Sbjct: 142 ELTAFGKPKKCRSSFNIFVSEHF 164
>gi|255074117|ref|XP_002500733.1| hypothetical protein MICPUN_57400 [Micromonas sp. RCC299]
gi|226515996|gb|ACO61991.1| hypothetical protein MICPUN_57400 [Micromonas sp. RCC299]
Length = 646
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PKKPL+ Y F + R+ ++ NP + + EVTK + WK IG EK E + K+
Sbjct: 568 PNAPKKPLSAYIIFTKERRSAVVAENPGLSLTEVTKELGARWKAIGAEEKSVFEAKAKKD 627
Query: 106 KEIYAQNVKKY 116
KE YA ++ Y
Sbjct: 628 KERYAVEMEAY 638
>gi|390336841|ref|XP_790476.2| PREDICTED: high mobility group protein 20A-like [Strongylocentrotus
purpuratus]
Length = 372
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL P+ P T Y +F + R K+ E NPN+ E+TKL++ +W K+ +K+R +E
Sbjct: 112 PLRDHNAPRAPHTGYVRFLKEGREKVREDNPNMSFAEITKLLAGQWSKMSAVDKQRFLDE 171
Query: 102 YAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKE 140
++KE YA+ +++Y EA + +++E +K + E
Sbjct: 172 ADRDKERYAKELQQYQ---QTEAFKAFSRKQEERKLRNE 207
>gi|170042638|ref|XP_001849025.1| dalao [Culex quinquefasciatus]
gi|167866152|gb|EDS29535.1| dalao [Culex quinquefasciatus]
Length = 694
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
Query: 29 SVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWK 88
+ TTA KQ L P+ P+KPL PY ++ ++ + I N ++K+ EV K++ ++W+
Sbjct: 60 TATTAEAKQ-----LKPPKAPEKPLMPYMRYSRKVWDSIKASNSDLKLWEVGKIIGQQWR 114
Query: 89 KIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFL 128
+ E++K+ EY EK Y +N+K YH +P + +L
Sbjct: 115 DLPESDKEEFITEYEAEKLEYEKNLKAYH--ASPAYLAYL 152
>gi|119367393|sp|Q4H0T5.1|TFAM_PRECR RecName: Full=Transcription factor A, mitochondrial; Short=mtTFA;
Flags: Precursor
gi|71142466|emb|CAH25649.1| mitochondrial transcription factor A [Trachypithecus cristatus]
Length = 246
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 69/119 (57%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + NP+ K E+ + +++ W+++ +++KK ++ Y + ++
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAENPDAKPTELIRRIAKLWRELPDSKKKIYQDAYRADWQV 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
Y + + ++ ++LTP I L KE K K++ +K + GKPK+P +++ +++ +
Sbjct: 110 YKEKISRFKEQLTPSQITSLEKEIMDKHLKRKAMTKRKELTQLGKPKRPRSAYNVYVAE 168
>gi|149043807|gb|EDL97258.1| transcription factor A, mitochondrial, isoform CRA_b [Rattus
norvegicus]
gi|149043808|gb|EDL97259.1| transcription factor A, mitochondrial, isoform CRA_b [Rattus
norvegicus]
Length = 192
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 69/116 (59%)
Query: 53 LTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQN 112
++ Y +F + K ++P+ K+ E+ + ++ W+++ EAEKK E ++ E ++Y +
Sbjct: 1 MSSYLRFSTEQLPKFKAKHPDAKVSELIRKIAAMWRELPEAEKKVYEADFKAEWKVYKEA 60
Query: 113 VKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
V KY ++LTP + L KE K+ KK+ + ++ GKPK+P +++ +++ ++
Sbjct: 61 VSKYKEQLTPSQLMGLEKEARQKRLKKKAQIKRRELILLGKPKRPRSAYNIYVSES 116
>gi|443718489|gb|ELU09092.1| hypothetical protein CAPTEDRAFT_156119 [Capitella teleta]
Length = 460
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 31 TTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMER----NPNIKIIEVTKLVSEE 86
T G + S+ + +P+ P+KPL PY ++ ++ +K+ ++ NP+ K+ E+ K++ +
Sbjct: 52 TKIGARNVESKVIKMPKAPEKPLMPYMRYSRKVSSKVWDQVKASNPDAKLWEIGKIIGQM 111
Query: 87 WKKIGEAEKKRLENEYAKEKEIYAQNVKKYHD 118
W+++ + EK+ +EY EK Y + +K YH+
Sbjct: 112 WRELADGEKQEYLDEYDAEKCKYMEAMKSYHN 143
>gi|351712173|gb|EHB15092.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1 [Heterocephalus glaber]
Length = 378
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 81/164 (49%), Gaps = 20/164 (12%)
Query: 15 NVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEK---PKKPLTPYFKFQGQIRNKIMERN 71
N + LR P +S TA S ++IP+ P KPL PY ++ ++ +++ N
Sbjct: 19 NNYRLRGN--PGTSSRVTA------SSAIAIPKPARPPDKPLMPYMRYNRKVWDQVKACN 70
Query: 72 PNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKE 131
P++K+ E K++ W+ + + EK+ NEY EK Y +++K YH+ +P + ++ +
Sbjct: 71 PDLKLWETGKIIGGMWRDLNDEEKQEYLNEYEAEKIEYNESMKAYHN--SPAYLAYINAK 128
Query: 132 KEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDKKEYE 175
+ +E+ ++ E G P Y+ I+ D +Y+
Sbjct: 129 SRAEAALEEEIRQRQSRTEKGDP-------YMSIQPGEDPDDYD 165
>gi|332017611|gb|EGI58308.1| Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
subunit A [Acromyrmex echinatior]
Length = 1249
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 28 NSVTTAGLKQQTSQPLSIPEK-------------PKKPLTPYFKFQGQIRNKIMERNPNI 74
+SV G+K+ + + P + P++PL+ YF F R K+ +NP++
Sbjct: 43 DSVCDNGVKRSATATGNTPNRTKKRKKAPRDATAPRQPLSGYFLFLNDRREKVRNQNPSL 102
Query: 75 KIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEV 134
E+TKL++ EW K+ +K+R + ++KE Y +++ D EA L EK+
Sbjct: 103 TFTEITKLLAAEWSKLPIDQKQRYLDAAEQDKERYN---REFSDYKQTEAYR-LFNEKQS 158
Query: 135 KKQKKEKRE 143
++Q + K+E
Sbjct: 159 ERQNENKKE 167
>gi|390472813|ref|XP_002756398.2| PREDICTED: transcription factor A, mitochondrial-like [Callithrix
jacchus]
Length = 287
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + +NP++K E+ + ++E W+++ E+EKK E+ Y +
Sbjct: 90 PKKPVSSYIRFSQEQLPIFRAQNPDVKTTELIRRIAERWRELPESEKKIYEDAYRAAWVV 149
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKK----EKREMKKLFRETGKPKKPGNSFYLF 164
Y + V + +LTP I L+KE K K+ +KRE+ L GKPKK ++ ++
Sbjct: 150 YKEEVNRIEAKLTPCEIMSLKKEVINKNLKRKLVLKKRELALL----GKPKKARTAYNIY 205
Query: 165 IKD 167
+ +
Sbjct: 206 VAE 208
>gi|444509487|gb|ELV09283.1| PDZ domain-containing protein GIPC3 [Tupaia chinensis]
Length = 804
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 45/73 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKYH 117
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAYQ 138
>gi|440804471|gb|ELR25348.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 205
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PKKP + +F F ++R +I + NP+ ++ K++ E+W K+G E+K E A +
Sbjct: 102 PNAPKKPCSAFFHFSKKMRPRIKDENPDASFGQLGKIIGEQWSKLGADERKEFETLAAAD 161
Query: 106 KEIYAQNVKKYH 117
KE YA+ +K Y
Sbjct: 162 KERYAKEMKDYQ 173
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ +T Y F + R +I +P + +V KL+ E W + + +K++ AK+
Sbjct: 9 PNAPKRAMTAYMLFSQEKRTQIKTDHPTVGFGQVGKLLGEAWAALPDGDKRKYNELAAKD 68
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
K Y + +Y E PE+ + +E+ KK+KK ++ PKKP ++F+ F
Sbjct: 69 KIRYQKEAAQYK-EDHPESSD--EEERPAKKRKK---------KDPNAPKKPCSAFFHFS 116
Query: 166 K 166
K
Sbjct: 117 K 117
>gi|410950083|ref|XP_003981741.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related
[Felis catus]
Length = 487
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKE 140
EK+ Y + ++ Y EA + ++ + KK KKE
Sbjct: 126 EKQQYMKELRAYQQS---EAYKMCTEKLQEKKIKKE 158
>gi|431922288|gb|ELK19379.1| hypothetical protein PAL_GLEAN10006034, partial [Pteropus alecto]
Length = 619
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 45/73 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E +
Sbjct: 55 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAER 114
Query: 105 EKEIYAQNVKKYH 117
EK+ Y + ++ Y
Sbjct: 115 EKQQYMKELRAYQ 127
>gi|443710428|gb|ELU04681.1| hypothetical protein CAPTEDRAFT_155070 [Capitella teleta]
Length = 269
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+PLT Y +F R +I E NP+ E+TK + EW K+ EK+R +E ++KE
Sbjct: 26 PKQPLTGYVRFLSDRREQIREENPSATFTEITKRLGAEWSKLPPMEKQRYLDEAERDKER 85
Query: 109 YAQNVKKYHDELTPEAIE-FLRKEKEVK 135
Y + ++ YH EA + FLRK+++ K
Sbjct: 86 YLKELEAYH---QTEAYKVFLRKQQDAK 110
>gi|345787347|ref|XP_854847.2| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily E
member 1-related [Canis lupus familiaris]
Length = 362
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKYH 117
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAYQ 138
>gi|348550097|ref|XP_003460869.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related-like
[Cavia porcellus]
Length = 330
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAY 137
>gi|291242470|ref|XP_002741130.1| PREDICTED: high mobility group 20A-like [Saccoglossus kowalevskii]
Length = 375
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
P+ PLT Y +F R K+ NP++ +VTK++ EW K+ +AEK+R +E K+KE
Sbjct: 113 PRAPLTGYIRFLNDRREKVRSDNPSLTFPDVTKMLGNEWSKLSQAEKQRYLDEAEKDKER 172
Query: 109 YAQNVKKYH 117
Y + +++Y
Sbjct: 173 YMKELEQYQ 181
>gi|281337972|gb|EFB13556.1| hypothetical protein PANDA_012791 [Ailuropoda melanoleuca]
Length = 268
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E +
Sbjct: 18 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAER 77
Query: 105 EKEIYAQNVKKYH 117
EK+ Y + ++ Y
Sbjct: 78 EKQQYMKELRAYQ 90
>gi|84000085|ref|NP_001033143.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1-related [Bos taurus]
gi|122145024|sp|Q32L68.1|HM20B_BOVIN RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related;
Short=SMARCE1-related protein; AltName: Full=HMG
box-containing protein 20B
gi|81674158|gb|AAI09741.1| High-mobility group 20B [Bos taurus]
Length = 317
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAY 137
>gi|301776396|ref|XP_002923622.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related-like
[Ailuropoda melanoleuca]
Length = 288
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E +
Sbjct: 37 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAER 96
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 97 EKQQYMKELRAY 108
>gi|300122042|emb|CBK22616.2| unnamed protein product [Blastocystis hominis]
Length = 224
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 49/71 (69%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+KPKKPL+ Y ++ + R ++ + NP +K+ E++K++ E+WK++ E EKK ++ Y +
Sbjct: 23 PDKPKKPLSGYMRYCNEQREQVKKENPELKLTEISKVLGEKWKELSEEEKKPYQDAYEAD 82
Query: 106 KEIYAQNVKKY 116
KE Y +++Y
Sbjct: 83 KEKYDLQMEEY 93
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 12/110 (10%)
Query: 44 SIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
+ P KPK+PL+ Y F R ++ +NP++ E+T L+ + WK++ E EK+ E ++A
Sbjct: 104 ADPNKPKRPLSSYIIFSNDKREEVKRKNPDMSNKEITTLLGKMWKELPEEEKQEYEKQHA 163
Query: 104 KEKEIYAQNVKKY---HDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRE 150
+EK+ Y + + +Y H EL KEK KKQK+ K MKK+ E
Sbjct: 164 EEKKAYEEKMGEYRREHPEL---------KEKTPKKQKETKSTMKKVSSE 204
>gi|195999226|ref|XP_002109481.1| hypothetical protein TRIADDRAFT_53566 [Trichoplax adhaerens]
gi|190587605|gb|EDV27647.1| hypothetical protein TRIADDRAFT_53566 [Trichoplax adhaerens]
Length = 329
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 52/84 (61%)
Query: 34 GLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEA 93
G+ Q +P P+ P+KPL PY ++ ++ K+ E++P++K+ E+ K++ W+ + +
Sbjct: 69 GVTQPRMEPTKPPKAPEKPLMPYMRYSSKMFEKVKEQHPDLKLWEIGKMIGAMWRNLDDK 128
Query: 94 EKKRLENEYAKEKEIYAQNVKKYH 117
+K+ ++Y K+K Y ++VK Y
Sbjct: 129 QKQEYFDDYEKDKRQYNESVKAYQ 152
>gi|326437020|gb|EGD82590.1| hypothetical protein PTSG_03243 [Salpingoeca sp. ATCC 50818]
Length = 210
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 16/125 (12%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KP+ LTPY F ++R IM+++PN + EV KL+ +W+++ + +KK + +
Sbjct: 46 PNKPRGALTPYMCFNKEVRPAIMQQHPNASVTEVAKLIGAQWRQLTDEQKKPYNDMARTD 105
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
+E Y + +K Y TP E R+ K+ K + PKKP +++++F
Sbjct: 106 RERYKEAMKNYV--PTPGFEEGGRRRKKKK--------------DPNAPKKPKSAYFVFA 149
Query: 166 KDNID 170
+ D
Sbjct: 150 ETRRD 154
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PKKP + YF F R+ + + P ++ + K EEW+ + E +K+ + + +
Sbjct: 135 PNAPKKPKSAYFVFAETRRDALRAQYPEDRVSDTAKRTGEEWRGMTEEQKRPFQLKAQEL 194
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y Q V +Y L
Sbjct: 195 KQEYDQAVAEYKASL 209
>gi|355694829|gb|AER99799.1| high-mobility group 20B [Mustela putorius furo]
Length = 269
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAY 137
>gi|47211316|emb|CAF92109.1| unnamed protein product [Tetraodon nigroviridis]
Length = 777
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S++++++ E +KK+ +++ ++
Sbjct: 88 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYRELPEKKKKKYVDDFLRD 147
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
KE++ Q++ K+ +E P+ +E + K
Sbjct: 148 KEMFVQSMDKFREE-HPDLVESMAK 171
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 42/69 (60%)
Query: 30 VTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKK 89
++ K++ S+ + PEKPK+P++ F F + R K+ + P++ E+T+L++ W +
Sbjct: 368 ASSPASKKKNSKTKASPEKPKRPISAMFIFSEEKRPKLQQERPDLSDSELTRLLARMWNE 427
Query: 90 IGEAEKKRL 98
+ + +K RL
Sbjct: 428 LPDKKKVRL 436
>gi|118371960|ref|XP_001019178.1| Nonhistone chromosomal protein LG-1, putative [Tetrahymena
thermophila]
gi|89300945|gb|EAR98933.1| Nonhistone chromosomal protein LG-1, putative [Tetrahymena
thermophila SB210]
Length = 157
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 46/71 (64%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+PL+ +F F+ ++ + NPN KI E+T +++E+WK +GE EKK+ E ++
Sbjct: 66 PAPPKRPLSAFFLFKQHNYEQVKKENPNAKITELTSMIAEKWKAVGEKEKKKYETLQSEA 125
Query: 106 KEIYAQNVKKY 116
K Y ++++ Y
Sbjct: 126 KAKYEKDMQAY 136
>gi|426229163|ref|XP_004008661.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related
[Ovis aries]
Length = 298
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAY 137
>gi|356523471|ref|XP_003530362.1| PREDICTED: high mobility group B protein 13-like isoform 1 [Glycine
max]
Length = 478
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 73/148 (49%), Gaps = 28/148 (18%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK P++ YF F R + N N +EV K+ SEEWK + E +K+ E K
Sbjct: 264 PLKPKHPMSAYFLFTNDRRAALAAENKNF--LEVPKITSEEWKNMTEEQKRPYEEMAKKN 321
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKE-VKKQKKE-------KREMKKLFRET------ 151
KE YA ++ Y + EA F+++E+E +K QK+E K + + + ++T
Sbjct: 322 KEQYALEMEAYKQKKDEEAAHFMKEEEEQMKLQKQEALQLLKKKEKTENIIKKTKQNRQK 381
Query: 152 ------------GKPKKPGNSFYLFIKD 167
+PKKP +SF LF K+
Sbjct: 382 KKQNKDDKNSDPNRPKKPASSFILFSKE 409
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
+P PY + N+I + NP + E++ ++ +WK + EKK E Y EKE Y
Sbjct: 153 RPSPPYILWMKDQWNEIKKANPEAEFKEISTMLGAKWKTVSAEEKKPYEGIYHAEKEAYL 212
Query: 111 QNVKKYHDE------LTPE-----AIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGN 159
Q + K E L E A+E L + + K++ ++ + K ++ KPK P +
Sbjct: 213 QVIAKEKRETEAMRLLEDEQKQRTAMELLEQYMQFKQEAEKDGKKNKKEKDPLKPKHPMS 272
Query: 160 SFYLFIKDNIDKKEYEGKSYM 180
+++LF D E K+++
Sbjct: 273 AYFLFTNDRRAALAAENKNFL 293
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%)
Query: 44 SIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
S P +PKKP + + F + R + E P I + LVS +WK++ E +++ + +
Sbjct: 391 SDPNRPKKPASSFILFSKEARKTLQEERPGISTSTLNALVSLKWKELSEEDRQFWNGQAS 450
Query: 104 KEKEIYAQNVKKYHDELTPEAIE 126
K + Y + +++Y+ L A +
Sbjct: 451 KAMDAYKKELEEYNKSLAATACQ 473
>gi|50291849|ref|XP_448357.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527669|emb|CAG61318.1| unnamed protein product [Candida glabrata]
Length = 201
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKPL+P+ F ++R +I +NP++ ++ L+ WK +GE EKK+ + YA+ K
Sbjct: 128 PKKPLSPFLLFSNEVREEIKSQNPSLSFGDLASLIGRRWKSLGEYEKKKYYDRYAENKSS 187
Query: 109 YAQNVKK 115
+ Q V++
Sbjct: 188 WEQEVQR 194
>gi|403296220|ref|XP_003939014.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related
[Saimiri boliviensis boliviensis]
Length = 429
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ EK+R +E +
Sbjct: 179 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAER 238
Query: 105 EKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKE 140
EK+ Y + ++ Y EA + ++ + KK KKE
Sbjct: 239 EKQQYMKELRAYQQS---EAYKMCTEKMQEKKIKKE 271
>gi|255537735|ref|XP_002509934.1| transcription factor, putative [Ricinus communis]
gi|223549833|gb|EEF51321.1| transcription factor, putative [Ricinus communis]
Length = 514
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 80/144 (55%), Gaps = 24/144 (16%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK-------KRL 98
P KPK+P++ +F F + R ++ N N++ EV K+ E+WK + E +K KR
Sbjct: 308 PLKPKQPMSAFFLFSNERRASLLAENKNVR--EVAKIAGEQWKNMTEEQKGPYEEMAKRN 365
Query: 99 ENEYAKEKEIYAQ-------NVKKYHDEL----TPEAIEFLRKEKE----VKKQKKEKRE 143
+ Y +E E Y Q N+KK +E+ EA++ L+K+++ +KK K+ +++
Sbjct: 366 KLRYMQEMEAYKQKKDEEAMNLKKEEEEMFKLQKQEALQLLKKKEKTDNMIKKTKENRQK 425
Query: 144 MKKLFRETGKPKKPGNSFYLFIKD 167
K+ + KPKKP +SF +F K+
Sbjct: 426 KKQQNVDPNKPKKPASSFLIFSKE 449
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
+P PY + N++ NPN + E++ ++ +WK + +KK E++Y EKE+Y
Sbjct: 197 RPSPPYILWCKDQWNEVKNENPNAEFKEISNILGAKWKNVSTEDKKPYEDKYQAEKEVYL 256
Query: 111 QNVKKYHDE------LTPE-----AIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGN 159
Q V K E L E A+E L + + K++ +++ + K ++ KPK+P +
Sbjct: 257 QVVNKEKRESEAMKLLEEEQKQKTAMELLEQYLQFKQETEKENKKTKKEKDPLKPKQPMS 316
Query: 160 SFYLF 164
+F+LF
Sbjct: 317 AFFLF 321
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKKP + + F + R + + P I + L+S +WK++ E E++ + A+
Sbjct: 433 PNKPKKPASSFLIFSKEARKNLAQERPVINNSTLNALISVKWKELSEEERQIWNAKAAEA 492
Query: 106 KEIYAQNVKKYH 117
EIY + +++Y+
Sbjct: 493 MEIYKKEMEEYN 504
>gi|356513291|ref|XP_003525347.1| PREDICTED: high mobility group B protein 13-like [Glycine max]
Length = 473
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 25/145 (17%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK P++ YF F R ++ N N +EV K+ +EEWK + E +K+ E K
Sbjct: 262 PLKPKHPMSAYFLFTNDRRAALVAENKNF--LEVPKITAEEWKNMTEEQKRPYEEMAKKN 319
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKE-VKKQKKEKREMKKLFRET------------- 151
KE YA ++ Y + EA F+++E+E +K QK+E ++ K +T
Sbjct: 320 KEKYALEMEVYKQKKDEEAAHFMKEEEEHMKLQKQEALQLLKKKEKTENIIKKTKQKKKQ 379
Query: 152 ---------GKPKKPGNSFYLFIKD 167
+PKKP +SF LF K+
Sbjct: 380 NKDDKNSDPNRPKKPASSFILFSKE 404
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
+P PY + N+I + N + E++ ++ +WK + EKK E Y EKE Y
Sbjct: 151 RPSPPYILWMKDQWNEIKKANSEAEFKEISTMLGSKWKTVTAEEKKPYEEIYHAEKEAYL 210
Query: 111 QNVKKYHDE------LTPE-----AIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGN 159
Q + K E L E A+E L + + K++ +++ + K ++ KPK P +
Sbjct: 211 QMIAKEKRETEAMRLLEDEQKQKTAMELLEQYMQFKQEAEKEGKKNKKEKDPLKPKHPMS 270
Query: 160 SFYLFIKD 167
+++LF D
Sbjct: 271 AYFLFTND 278
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 45/88 (51%)
Query: 44 SIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
S P +PKKP + + F + + + E P I + LVS +WK++ +++ + +
Sbjct: 386 SDPNRPKKPASSFILFSKEAKKTLHEERPGINTSTLNALVSLKWKELSVEDRQFWNGQAS 445
Query: 104 KEKEIYAQNVKKYHDELTPEAIEFLRKE 131
K + Y + +++Y+ + A + L+ E
Sbjct: 446 KAMDAYKKELEEYNKSIAATASQELKTE 473
>gi|118488333|gb|ABK95985.1| unknown [Populus trichocarpa]
Length = 232
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 26/145 (17%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK PL+ +F F + R ++ N N+ +EV K+ EEWK + E +K+ E K
Sbjct: 30 PLKPKHPLSAFFLFSNERRAALLAENKNV--LEVAKIAGEEWKNMTEKQKRPYEEIAKKN 87
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKE--VKKQKKEKREMKKLFRET------------ 151
KE Y Q ++ Y EA+ L+KE E +K QK+E ++ K +T
Sbjct: 88 KEKYTQEMEAYKQNKDEEAMN-LKKEGEELMKLQKQEALQLLKKKEKTENIIKKTKEQRQ 146
Query: 152 ---------GKPKKPGNSFYLFIKD 167
KPKKP +SF LF K+
Sbjct: 147 KKQQQNADPNKPKKPASSFLLFSKE 171
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKKP + + F + R ++ +P I +T ++S +WK++ + EK+ + A+
Sbjct: 155 PNKPKKPASSFLLFSKETRKSLVHEHPGINSSTLTAMISVKWKELIQEEKQIWNCKAAEA 214
Query: 106 KEIYAQNVKKYH 117
E Y + +++YH
Sbjct: 215 MEAYKKELEEYH 226
>gi|126226|sp|P11873.1|HMGC_TETTH RecName: Full=High mobility group protein C; AltName:
Full=Non-histone chromosomal protein LG-1
Length = 100
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 40 SQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLE 99
S+ S P PK+PL+ +F F+ ++ + NPN KI E+T +++E+WK +GE EKK+ E
Sbjct: 3 SKDDSKPAPPKRPLSAFFLFKQHNYEQVKKENPNAKITELTSMIAEKWKAVGEKEKKKYE 62
Query: 100 NEYAKEKEIYAQNVKKY 116
++ K Y ++++ Y
Sbjct: 63 TLQSEAKAKYEKDMQAY 79
>gi|145540136|ref|XP_001455758.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423566|emb|CAK88361.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 9/82 (10%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNI---------KIIEVTKLVSEEWKKIGEAEKK 96
P PK+PLTP+F F + R+K++ERNP I K+ +++++ ++W + E EK+
Sbjct: 30 PNAPKRPLTPFFLFSQKYRDKVLERNPGIDQRDYSLEVKLTQISQMAGQKWNSMSEEEKQ 89
Query: 97 RLENEYAKEKEIYAQNVKKYHD 118
++Y + K Y ++K Y+D
Sbjct: 90 PYVDQYNEAKNKYDGDLKVYND 111
>gi|157127700|ref|XP_001661139.1| hypothetical protein AaeL_AAEL010903 [Aedes aegypti]
gi|108872838|gb|EAT37063.1| AAEL010903-PA [Aedes aegypti]
Length = 689
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ P+KPL PY ++ ++ + I N ++K+ EV K++ ++W+ + E+EK+ EY E
Sbjct: 69 PKAPEKPLMPYMRYSRKVWDSIKVSNSDLKLWEVGKIIGQQWRDLPESEKEEFITEYEAE 128
Query: 106 KEIYAQNVKKYHDELTPEAIEFL 128
K Y +N+K YH +P + +L
Sbjct: 129 KLEYEKNLKAYHS--SPAYLAYL 149
>gi|356554781|ref|XP_003545721.1| PREDICTED: uncharacterized protein LOC100781233 [Glycine max]
Length = 602
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 11/130 (8%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK P++ Y F R + RN N+ +EV K+ SEEWK + E +K+ E K
Sbjct: 355 PLKPKHPMSAYLFFTNDRRAALAARNKNL--LEVPKITSEEWKNMAEEQKRPYEEMAKKN 412
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKE-VKKQKKEKREMKKLFRETGKPKKPGNSFYLF 164
KE YA ++ Y + EA F+++E++ +K QK+E ++ K K +K N +
Sbjct: 413 KEQYALQMEAYKQKKDEEAGHFMKEEEDHMKLQKQEALQLLK------KKEKTENIIKII 466
Query: 165 IKDNIDKKEY 174
+ + DKKEY
Sbjct: 467 VLE--DKKEY 474
>gi|145480005|ref|XP_001426025.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393097|emb|CAK58627.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 9/82 (10%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNI---------KIIEVTKLVSEEWKKIGEAEKK 96
P PK+PLT +F F + R K++ERNP I K+I+++++ ++W+ + E EK+
Sbjct: 30 PNAPKRPLTAFFLFSQKYREKVLERNPGIDLSDYQLEVKLIQISQMAGQKWQSMSEQEKQ 89
Query: 97 RLENEYAKEKEIYAQNVKKYHD 118
++Y + K Y +VK+Y++
Sbjct: 90 PYVDQYNQAKSKYNDDVKEYNE 111
>gi|359067192|ref|XP_003586318.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related-like
[Bos taurus]
Length = 177
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAY 137
>gi|395831389|ref|XP_003788785.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related
[Otolemur garnettii]
Length = 317
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ +EK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPSEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAY 137
>gi|351694694|gb|EHA97612.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1-related [Heterocephalus
glaber]
Length = 328
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ EK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPGEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAY 137
>gi|296485730|tpg|DAA27845.1| TPA: SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1-related [Bos taurus]
Length = 161
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAY 137
>gi|118343938|ref|NP_001071793.1| transcription factor protein [Ciona intestinalis]
gi|70570759|dbj|BAE06616.1| transcription factor protein [Ciona intestinalis]
Length = 164
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 46/70 (65%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKPLT YF F R K+++ NP++ I E++KLV ++W++ +K+ + AK +E
Sbjct: 21 PKKPLTAYFIFMNDCRQKVIKENPSLSITEISKLVGKKWRETSTKDKEPFNKKAAKLREE 80
Query: 109 YAQNVKKYHD 118
Y + ++KY++
Sbjct: 81 YNKKLEKYNN 90
>gi|159476440|ref|XP_001696319.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158282544|gb|EDP08296.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 179
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PKKPLT + F IR + NP I EV K++ E+WK + +KK + + AK+
Sbjct: 58 PNAPKKPLTSFMYFSNAIRESVKSENPGIAFGEVGKVIGEKWKGLSADDKKEYDEKAAKD 117
Query: 106 KEIYAQNVKKY 116
KE Y + ++ Y
Sbjct: 118 KERYQKEMESY 128
>gi|291224884|ref|XP_002732433.1| PREDICTED: general transcription factor IIH, polypeptide 2, 44kD
subunit-like [Saccoglossus kowalevskii]
Length = 593
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 10/138 (7%)
Query: 40 SQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLE 99
SQ +P KPK+P TP+ F ++ N ERN + ++ K S+EW + + +K +
Sbjct: 395 SQNEELPRKPKRPTTPFVVFAEKMFNSSPERNYS----KILKDASKEWANMSDEDKTQYY 450
Query: 100 NEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGN 159
+ Y + Y + +K Y T E E RK KK ++++R K + GKPK PG+
Sbjct: 451 DTYKERFAKYKEEMKTYQP--TEEETEAQRK----KKAREQRRLTLKKLAKLGKPKLPGS 504
Query: 160 SFYLFIKDNIDKKEYEGK 177
S+ +++++ + + +G+
Sbjct: 505 SYSMYVREKMKSADSKGR 522
>gi|157823655|ref|NP_001102201.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1-related [Rattus
norvegicus]
gi|149034420|gb|EDL89157.1| high mobility group 20 B (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149034421|gb|EDL89158.1| high mobility group 20 B (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149034422|gb|EDL89159.1| high mobility group 20 B (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 318
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E K
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEK 125
Query: 105 EKEIYAQNVKKYH 117
EK+ Y + + Y
Sbjct: 126 EKQQYLKELWAYQ 138
>gi|9858863|gb|AAG01174.1| smarce1-related protein [Homo sapiens]
Length = 317
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ EK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAY 137
>gi|11528488|ref|NP_034570.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1-related [Mus musculus]
gi|253683479|ref|NP_001156637.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1-related [Mus musculus]
gi|253683481|ref|NP_001156638.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1-related [Mus musculus]
gi|57012881|sp|Q9Z104.1|HM20B_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related;
Short=SMARCE1-related protein; AltName:
Full=BRCA2-associated factor 35; AltName: Full=HMG
box-containing protein 20B; AltName: Full=Structural
DNA-binding protein BRAF35
gi|7673029|gb|AAF66708.1|AF146224_1 HMG domain protein HMGX2 [Mus musculus]
gi|4321968|gb|AAD15897.1| Smarce1-related protein [Mus musculus]
gi|15030159|gb|AAH11334.1| Hmg20b protein [Mus musculus]
gi|74149085|dbj|BAE32194.1| unnamed protein product [Mus musculus]
gi|74214982|dbj|BAE33486.1| unnamed protein product [Mus musculus]
gi|148699474|gb|EDL31421.1| high mobility group 20 B, isoform CRA_a [Mus musculus]
gi|148699477|gb|EDL31424.1| high mobility group 20 B, isoform CRA_a [Mus musculus]
gi|148699478|gb|EDL31425.1| high mobility group 20 B, isoform CRA_a [Mus musculus]
Length = 317
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E K
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEK 125
Query: 105 EKEIYAQNVKKYH 117
EK+ Y + + Y
Sbjct: 126 EKQQYLKELWAYQ 138
>gi|426386672|ref|XP_004059807.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related
[Gorilla gorilla gorilla]
Length = 321
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ EK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAY 137
>gi|74212810|dbj|BAE33368.1| unnamed protein product [Mus musculus]
Length = 317
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E K
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEK 125
Query: 105 EKEIYAQNVKKYH 117
EK+ Y + + Y
Sbjct: 126 EKQQYLKELWAYQ 138
>gi|303278366|ref|XP_003058476.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226459636|gb|EEH56931.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 1251
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 36 KQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK 95
KQ++S SI +KPK+ PY F + R KI+E NP I EV K + E WKK+ + EK
Sbjct: 497 KQKSSDDTSIKKKPKRTPGPYVNFCKETRPKIVEENPGITFGEVGKKLGEAWKKLSDDEK 556
Query: 96 KRLENEYAKEKE 107
+R ++ +E
Sbjct: 557 ERYRSKVIPPEE 568
>gi|148699476|gb|EDL31423.1| high mobility group 20 B, isoform CRA_c [Mus musculus]
Length = 312
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E K
Sbjct: 61 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEK 120
Query: 105 EKEIYAQNVKKYH 117
EK+ Y + + Y
Sbjct: 121 EKQQYLKELWAYQ 133
>gi|380808724|gb|AFE76237.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1-related [Macaca mulatta]
gi|384944724|gb|AFI35967.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1-related [Macaca mulatta]
Length = 317
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ EK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAY 137
>gi|383415079|gb|AFH30753.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1-related [Macaca mulatta]
Length = 317
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ EK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAY 137
>gi|83715964|ref|NP_006330.2| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1-related [Homo sapiens]
gi|397496981|ref|XP_003819298.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related [Pan
paniscus]
gi|57012878|sp|Q9P0W2.1|HM20B_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related;
Short=SMARCE1-related protein; AltName:
Full=BRCA2-associated factor 35; AltName: Full=HMG
box-containing protein 20B; AltName: Full=HMG
domain-containing protein 2; AltName: Full=HMG
domain-containing protein HMGX2; AltName: Full=Sox-like
transcriptional factor; AltName: Full=Structural
DNA-binding protein BRAF35
gi|7673027|gb|AAF66707.1|AF146223_1 HMG domain protein HMGX2 [Homo sapiens]
gi|9909772|emb|CAB90809.2| HMG20B [Homo sapiens]
gi|12597463|gb|AAG60060.1| structural DNA-binding protein BRAF35 [Homo sapiens]
gi|12803455|gb|AAH02552.1| HMG20B protein [Homo sapiens]
gi|31890129|gb|AAH03505.2| High-mobility group 20B [Homo sapiens]
gi|32949298|gb|AAH04408.2| High-mobility group 20B [Homo sapiens]
gi|119589712|gb|EAW69306.1| high-mobility group 20B, isoform CRA_a [Homo sapiens]
gi|119589713|gb|EAW69307.1| high-mobility group 20B, isoform CRA_a [Homo sapiens]
gi|119589714|gb|EAW69308.1| high-mobility group 20B, isoform CRA_a [Homo sapiens]
gi|167774057|gb|ABZ92463.1| high-mobility group 20B [synthetic construct]
gi|410218872|gb|JAA06655.1| high mobility group 20B [Pan troglodytes]
gi|410290426|gb|JAA23813.1| high mobility group 20B [Pan troglodytes]
gi|410338883|gb|JAA38388.1| high mobility group 20B [Pan troglodytes]
Length = 317
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ EK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAY 137
>gi|402903710|ref|XP_003914703.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related
isoform 1 [Papio anubis]
gi|402903712|ref|XP_003914704.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related
isoform 2 [Papio anubis]
Length = 317
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ EK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAY 137
>gi|395750192|ref|XP_003779075.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related
[Pongo abelii]
Length = 278
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ EK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLF 148
EK+ Y + ++ Y + +EK+VKK+ M L
Sbjct: 126 EKQQYMKELRAYQQSEAYKMCTEKIQEKKVKKEDSSSGLMNTLL 169
>gi|432116887|gb|ELK37474.1| hypothetical protein MDA_GLEAN10011134 [Myotis davidii]
Length = 349
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ EK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKYH 117
EK+ Y + ++ Y
Sbjct: 126 EKQQYMKELRAYQ 138
>gi|417409519|gb|JAA51260.1| Putative swi/snf-related matrix-associated actin-dependent
regulator, partial [Desmodus rotundus]
Length = 304
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ EK+R +E +
Sbjct: 53 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAER 112
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 113 EKQQYMKELRAY 124
>gi|328351596|emb|CCA37995.1| Uncharacterized AAA domain-containing protein C26H5.02c
[Komagataella pastoris CBS 7435]
Length = 863
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT YF + R +IME P + +E+T S++WK + E+ +
Sbjct: 116 PNAPKKPLTMYFAYSALARKEIMEERARKGLPPLSSLEMTHETSKKWKDLPSEERDEWKR 175
Query: 101 EYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPK 155
+Y +E E+Y +Y D+L E + ++ +K K E PK
Sbjct: 176 KYNEELELYQHEKDRYIDDLISTGAEIPEEYQKAAHTRKRKIEFANASNLLKHPK 230
>gi|224058355|ref|XP_002299486.1| high mobility group family [Populus trichocarpa]
gi|222846744|gb|EEE84291.1| high mobility group family [Populus trichocarpa]
Length = 498
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 26/145 (17%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK PL+ +F F + R ++ N N+ +EV K+ EEWK + E +K+ E K
Sbjct: 296 PLKPKHPLSAFFLFSNERRAALLAENKNV--LEVAKIAGEEWKNMTEKQKRPYEEIAKKN 353
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKE--VKKQKKEKREMKKLFRET------------ 151
KE Y Q ++ Y EA+ L+KE E +K QK+E ++ K +T
Sbjct: 354 KEKYTQEMEAYKQNKDEEAMN-LKKEGEELMKLQKQEALQLLKKKEKTENIIKKTKEQRQ 412
Query: 152 ---------GKPKKPGNSFYLFIKD 167
KPKKP +SF LF K+
Sbjct: 413 KKQQQNADPNKPKKPASSFLLFSKE 437
Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKKP + + F + R ++ +P I +T ++S +WK++ + EK+ + A+
Sbjct: 421 PNKPKKPASSFLLFSKETRKSLVHEHPGINSSTLTAMISVKWKELIQEEKQIWNCKAAEA 480
Query: 106 KEIYAQNVKKYH 117
E Y + +++YH
Sbjct: 481 MEAYKKELEEYH 492
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 18/131 (13%)
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIY 109
K+P PY + N++ + NP+ + +++ ++ +WK I EKK E +Y EKE Y
Sbjct: 181 KRPCPPYSLWCKDQWNEVKKENPDAEFKDISHILGAKWKTITAEEKKPYEEKYQVEKEAY 240
Query: 110 AQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETG----------------K 153
+ + K E EA++ L +E++ K + + + +E G K
Sbjct: 241 LKLMTKEKRE--SEAMKLLEEEQKQKTAMELLEQYLQFKQEAGQEENKKNKTKKEKDPLK 298
Query: 154 PKKPGNSFYLF 164
PK P ++F+LF
Sbjct: 299 PKHPLSAFFLF 309
>gi|3551257|dbj|BAA32827.1| 98b [Daucus carota]
Length = 502
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 83/147 (56%), Gaps = 27/147 (18%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK-------KRL 98
P KPK P++ +F F + R ++ N+ +EV K+ EEWK + E EK K+
Sbjct: 287 PLKPKHPVSAFFLFMNERRADLVAEKKNV--LEVGKITGEEWKNMTEKEKAPYEEMAKKN 344
Query: 99 ENEYAKEKEIY-------AQNVKKYHDELT----PEAIEFLRKE-------KEVKKQKKE 140
+N+Y ++ E+Y A +++K +EL+ EA++ L+K+ K+ K+++++
Sbjct: 345 KNQYLQQMEVYKKKKDEEAASLQKEEEELSKIQKQEAMQLLKKKEKTENLIKKTKEERQK 404
Query: 141 KREMKKLFRETGKPKKPGNSFYLFIKD 167
K++ +K + KPK+P +SF LF K+
Sbjct: 405 KQKGEKKIVDPNKPKRPASSFLLFSKE 431
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 36 KQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK 95
KQ+ + + P KPK+P + + F + R I E P I + L+S +WK+I EK
Sbjct: 405 KQKGEKKIVDPNKPKRPASSFLLFSKEARKTISEERPGINNSTLNALISVKWKEISHEEK 464
Query: 96 KRLENEYAKEKEIYAQNVKKYH 117
+ + A E Y + +++Y+
Sbjct: 465 QLWNEKAAGAMEAYKKEMEEYN 486
>gi|148699475|gb|EDL31422.1| high mobility group 20 B, isoform CRA_b [Mus musculus]
Length = 284
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E K
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEK 125
Query: 105 EKEIYAQNVKKYH 117
EK+ Y + + Y
Sbjct: 126 EKQQYLKELWAYQ 138
>gi|149034423|gb|EDL89160.1| high mobility group 20 B (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 284
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E K
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEK 125
Query: 105 EKEIYAQNVKKYH 117
EK+ Y + + Y
Sbjct: 126 EKQQYLKELWAYQ 138
>gi|355702975|gb|EHH29466.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1-related, partial [Macaca
mulatta]
Length = 262
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ EK+R +E +
Sbjct: 53 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAER 112
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ Y
Sbjct: 113 EKQQYMKELRAY 124
>gi|449706835|gb|EMD46595.1| high mobility group (HMG) box domain containing protein, partial
[Entamoeba histolytica KU27]
Length = 76
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKK 96
P +PK+P TPYF + + R I E +P+I+ E++K+ SE+WK +GE EKK
Sbjct: 26 PNRPKRPPTPYFIYLNEHRASIKEEHPDIRFTEISKVASEQWKALGEEEKK 76
>gi|440298682|gb|ELP91313.1| hypothetical protein EIN_153200 [Entamoeba invadens IP1]
Length = 185
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKKP T Y + + R +I E+ P++K+ EV K E WK +GE +KK +++ K
Sbjct: 97 PNKPKKPQTAYMLYLNEHRAEIKEKFPDMKVTEVAKKAGENWKAMGEEDKKPYQDKADKA 156
Query: 106 KEIYAQNVKKYHD 118
KE + +KKY +
Sbjct: 157 KETWKTEMKKYEE 169
>gi|410921274|ref|XP_003974108.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related-like
[Takifugu rubripes]
Length = 298
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R + R P++ E+TK + EW ++ +++K+R +E +
Sbjct: 43 LPNGPKAPVTGYVRFLNERREHMRARYPDLPFPEITKRLGAEWTRLSQSDKQRYLDEAER 102
Query: 105 EKEIYAQNVKKY 116
EK YAQ +K+Y
Sbjct: 103 EKMQYAQELKEY 114
>gi|324504241|gb|ADY41831.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1 [Ascaris suum]
Length = 404
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 8 TGVFTGGNVFNLR-SCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNK 66
+G T N +LR + H NS T + Q S L P+ P +PL PY +F ++ K
Sbjct: 15 SGDETSFNYPSLRYKTMFRHPNS-TPSRPSGQDSGSLKPPKAPDRPLVPYMRFSRKMWAK 73
Query: 67 IMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHD 118
+ +P+ ++ ++ K++ + W+ E+EK + EY EK Y + +K YH+
Sbjct: 74 VRSEHPDSQLWDIGKVIGQMWRDAPESEKAIYQQEYEIEKTEYEKALKAYHN 125
>gi|169869341|ref|XP_001841237.1| hypothetical protein CC1G_11400 [Coprinopsis cinerea okayama7#130]
gi|116497705|gb|EAU80600.1| hypothetical protein CC1G_11400 [Coprinopsis cinerea okayama7#130]
Length = 255
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + Y FQ ++RN++ +NPN+ E+ L+SE+WK + + +K+ + K
Sbjct: 74 PNAPKRPASSYILFQNEVRNELKRQNPNLTNPELLTLISEKWKNMTDEQKETYNQQMLKA 133
Query: 106 KEIYAQNVKKYHDELTP 122
KE Y+Q K +D +P
Sbjct: 134 KEEYSQ-AKNAYDNRSP 149
>gi|255074119|ref|XP_002500734.1| high-mobility protein [Micromonas sp. RCC299]
gi|226515997|gb|ACO61992.1| high-mobility protein [Micromonas sp. RCC299]
Length = 153
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PKKPL+ Y F + R+ ++ NP + + EVTK + WK IG EK E + K+
Sbjct: 75 PNAPKKPLSAYIIFTKERRSAVVAENPGLSLTEVTKELGARWKAIGAEEKSVFEAKAKKD 134
Query: 106 KEIYAQNVKKYH 117
KE YA ++ Y
Sbjct: 135 KERYAVEMEAYE 146
>gi|303282319|ref|XP_003060451.1| high mobility group family B protein [Micromonas pusilla CCMP1545]
gi|226457922|gb|EEH55220.1| high mobility group family B protein [Micromonas pusilla CCMP1545]
Length = 922
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+PL+ Y F G R K+++ NP +K E+ + +WK IG +K + E +
Sbjct: 805 PNAPKRPLSAYILFSGDARAKVVKENPEMKATEIIAAIGAKWKAIGAKDKAKYEAKATAA 864
Query: 106 KEIYAQNVKKY 116
KE Y + K Y
Sbjct: 865 KEKYDEEKKSY 875
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 15/128 (11%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
+P Y F +R + E +P + ++E K++ +W+ IGE +K R E + A EKE YA
Sbjct: 591 RPANAYMLFANDMRAAVAEEHPEMSMVERGKVLGAKWRAIGEKDKARYETKAAAEKERYA 650
Query: 111 QNVKKYHDELTPEAIEFLRKEKEVKKQKKEKR-----------EMKKLFRETGKPKKPGN 159
+ +K Y P +E + + ++ KK ++ PK+P N
Sbjct: 651 EEMKHY----VPPVVESDDDDDDDTTTTTAEKDADADAPAAKGGKKKKKKDPNAPKRPPN 706
Query: 160 SFYLFIKD 167
++ LF D
Sbjct: 707 AYILFSND 714
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P Y F R K+ +++P + E+ ++ +W+ E EK + E + +
Sbjct: 698 PNAPKRPPNAYILFSNDARAKLQKQHPEMSPKEIMSTLAAQWQNASEKEKAKYEAKTKEA 757
Query: 106 KEIY 109
KE Y
Sbjct: 758 KEAY 761
>gi|170591438|ref|XP_001900477.1| HMG box family protein [Brugia malayi]
gi|158592089|gb|EDP30691.1| HMG box family protein [Brugia malayi]
Length = 392
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%)
Query: 37 QQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKK 96
Q S L P+ P +PL PY +F ++ K+ NP+ ++ ++ K++ + W+ E+EK
Sbjct: 24 QNDSNSLKPPKPPDRPLVPYMRFSRKMWAKVRAENPDSQLWDIGKVIGQMWRDAPESEKA 83
Query: 97 RLENEYAKEKEIYAQNVKKYHD 118
EY E++ Y + +K YH+
Sbjct: 84 IYHQEYDIERQEYEKALKAYHN 105
>gi|344247018|gb|EGW03122.1| PDZ domain-containing protein GIPC3 [Cricetulus griseus]
Length = 546
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ +EK+R +E K
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPSEKQRYLDEAEK 125
Query: 105 EKEIYAQNVKKYH 117
EK+ Y + + Y
Sbjct: 126 EKQQYLKELWAYQ 138
>gi|354488721|ref|XP_003506515.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related-like
[Cricetulus griseus]
Length = 317
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ +EK+R +E K
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPSEKQRYLDEAEK 125
Query: 105 EKEIYAQNVKKY 116
EK+ Y + + Y
Sbjct: 126 EKQQYLKELWAY 137
>gi|148236833|ref|NP_001082803.1| high mobility group protein 20A [Danio rerio]
gi|126632105|gb|AAI33952.1| Zgc:162335 protein [Danio rerio]
Length = 291
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ P++ E+T+++ EW K+ EK+R +E
Sbjct: 38 PLKDSNAPKAPLTGYVRFMNERREQLRAERPDVPFPEITRMLGNEWSKLPADEKQRYLDE 97
Query: 102 YAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSF 161
K+KE Y + +++Y + T F RK +E +K K+ + + + + PG S
Sbjct: 98 ADKDKERYMRELEQY--QKTEAYKHFSRKVQEKQKGKRHRGDAGR--------QAPGESL 147
Query: 162 Y 162
+
Sbjct: 148 H 148
>gi|260820323|ref|XP_002605484.1| hypothetical protein BRAFLDRAFT_126796 [Branchiostoma floridae]
gi|229290818|gb|EEN61494.1| hypothetical protein BRAFLDRAFT_126796 [Branchiostoma floridae]
Length = 375
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK PLT Y +F + R K+ + NPN+ E+T+++ EW K+ EK++ +E K+KE
Sbjct: 125 PKAPLTGYVRFLNERREKMRQDNPNVPFPEITRMLGNEWSKLAPHEKQQYLDEAEKDKER 184
Query: 109 YAQNVKKYH 117
Y + +++Y
Sbjct: 185 YMKELEEYQ 193
>gi|442749197|gb|JAA66758.1| Putative transcription factor a mitochondrial [Ixodes ricinus]
Length = 287
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%)
Query: 37 QQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKK 96
Q+ +++P PK+P + Y F R +M +NP +K EV K ++E+W E KK
Sbjct: 46 QKVRSDVALPPAPKRPPSGYILFINDTRKTVMRQNPALKPTEVVKTLAEKWNMADEITKK 105
Query: 97 RLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKK 156
+ E + E +A+ + Y LTP+ + L + KK + K+++ + +E +PK
Sbjct: 106 KYETLSRERMEAFAKEKEAYTSRLTPQQKQALAELSLDKKLRVSKKKLNEKLKELDRPKG 165
Query: 157 PGNSFYLF 164
+F LF
Sbjct: 166 ARTAFVLF 173
>gi|161796|gb|AAA30120.1| high-mobility-group protein C, partial [Tetrahymena thermophila]
Length = 92
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+PL+ +F F+ ++ + NPN KI E+T +++E+WK +GE EKK+ E ++
Sbjct: 1 PAPPKRPLSAFFLFKQHNYEQVKKENPNAKITELTSMIAEKWKAVGEKEKKKYETLQSEA 60
Query: 106 KEIYAQNVKKY 116
K Y + ++ Y
Sbjct: 61 KAKYEKALQAY 71
>gi|7799120|emb|CAB90813.1| Hmg20B [Mus musculus]
Length = 151
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E K
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEK 125
Query: 105 EKEIYAQNVKKYH 117
EK+ Y + + Y
Sbjct: 126 EKQQYLKELWAYQ 138
>gi|74212751|dbj|BAE33346.1| unnamed protein product [Mus musculus]
Length = 150
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E K
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEK 125
Query: 105 EKEIYAQNVKKYH 117
EK+ Y + + Y
Sbjct: 126 EKQQYLKELWAYQ 138
>gi|442749551|gb|JAA66935.1| Putative transcription factor a mitochondrial [Ixodes ricinus]
Length = 262
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%)
Query: 37 QQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKK 96
Q+ +++P PK+P + Y F R +M +NP +K EV K ++E+W E KK
Sbjct: 46 QKVRSDVALPPAPKRPPSGYILFLNDTRKTVMRQNPALKPTEVVKTLAEKWNMADEITKK 105
Query: 97 RLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKK 156
+ E + E +A+ + Y LTP+ + L + KK + K+++ + +E +PK
Sbjct: 106 KYETLSRERMEAFAKEKEAYTSRLTPQQKQALAELSLDKKLRVSKKKLNEKLKELDRPKG 165
Query: 157 PGNSFYLF 164
+F LF
Sbjct: 166 ARTAFVLF 173
>gi|221120410|ref|XP_002166637.1| PREDICTED: high mobility group-T protein-like [Hydra
magnipapillata]
gi|388594888|gb|AFK74879.1| transcription factor HMG-B3b [Hydra vulgaris]
Length = 177
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 44/69 (63%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+ ++ YF F IR K+ NP + + E+ K++ E W+K+ +++KK EN AK+++
Sbjct: 108 PKRNVSAYFHFASAIRPKLKADNPTLGVTELAKMIGERWQKLTDSDKKPYENLAAKDRDR 167
Query: 109 YAQNVKKYH 117
Y + + +Y+
Sbjct: 168 YQRELSEYN 176
>gi|158260023|dbj|BAF82189.1| unnamed protein product [Homo sapiens]
Length = 317
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 44/72 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ EK+R +E +
Sbjct: 66 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAER 125
Query: 105 EKEIYAQNVKKY 116
EK+ Y + ++ +
Sbjct: 126 EKQQYMKELRAH 137
>gi|410902783|ref|XP_003964873.1| PREDICTED: nucleolar transcription factor 1-like [Takifugu
rubripes]
Length = 736
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S++++++ E +KK+ +++ ++
Sbjct: 101 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYRELPEKKKKKYVDDFLRD 160
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
KE + ++ K+ +E P+ +E + K
Sbjct: 161 KETFVHSMDKFREE-HPDLVESMAK 184
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK---KRLE 99
PEKPK+P++ F F + R K+ + P++ E+T+L++ W ++ + +K KRLE
Sbjct: 397 PEKPKRPISAMFIFSEEKRPKLQQERPDLSDSELTRLLARMWNELPDKKKEKYKRLE 453
>gi|297813579|ref|XP_002874673.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata]
gi|297320510|gb|EFH50932.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata]
Length = 448
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 45/155 (29%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK P++ Y + + R + + N +IEV K+ EEWK + E +K + K+
Sbjct: 245 PLKPKHPISAYLIYANERRAAL--KGENKSVIEVAKMTGEEWKNLSEEQKAPYDQMAKKK 302
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETG------------- 152
KEIY Q ++ Y + KE+E QKKE+ E+ KL ++
Sbjct: 303 KEIYLQEMEGYK----------ITKEEETMSQKKEEEELMKLHKQEALQLLKKKEKTDNI 352
Query: 153 --------------------KPKKPGNSFYLFIKD 167
KPKKP +S++LF K+
Sbjct: 353 IKKTKEMTKNKKKNEKVDPNKPKKPASSYFLFCKE 387
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKKP + YF F + R ++E +P I VT +S +WK++GE EK+ + A+
Sbjct: 371 PNKPKKPASSYFLFCKEARKSVLEEHPGINNSTVTAHISLKWKELGEEEKQVYNGKAAEL 430
Query: 106 KEIYAQNVKKYH 117
E Y + V++Y+
Sbjct: 431 MEAYKKEVEEYN 442
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIY 109
K+P TPY + N + + NP E + ++ +W+ + EKK E +Y +KE Y
Sbjct: 132 KRPSTPYILWCKDNWNDVKKENPEADFKETSNILGAKWRTLSVEEKKFYEEKYQVDKEAY 191
Query: 110 AQNVKKYHDELTPEAIEFLRKEKEVK 135
Q + K E EA++ L E++ K
Sbjct: 192 LQVITKEKRER--EAMKLLDDEQKQK 215
>gi|428175130|gb|EKX44022.1| hypothetical protein GUITHDRAFT_153133 [Guillardia theta CCMP2712]
Length = 148
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKE 107
KPKKPL+ Y F +R + + NP + EV KL+ +W+ + E+EKK+ ++ KEK
Sbjct: 83 KPKKPLSAYMLFSNHVRPDVKKANPTVSFGEVAKLIGAQWRGLPESEKKKWKDLEDKEKA 142
Query: 108 IYAQN 112
+AQN
Sbjct: 143 KFAQN 147
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
+KPK+PL+ YF + G R + + P I E+ K + E W+++ EKK E+
Sbjct: 10 DKPKRPLSAYFLYAGDKRATVKAKFPTIGNTEIVKKLGEMWRELPANEKKVYED 63
>gi|432860343|ref|XP_004069511.1| PREDICTED: high mobility group protein 20A-like [Oryzias latipes]
Length = 291
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 18/137 (13%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
P+ PK PLT Y +F R ++ P++ E+T+++ EW K+ EK+R +E
Sbjct: 38 PMKDSNAPKAPLTGYVRFMNDRREQLRAERPDVPFPEITRMLGNEWSKLPPEEKQRYLDE 97
Query: 102 YAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSF 161
++KE Y + ++KY + T F RK +E +K K+ + G++
Sbjct: 98 AERDKERYMRELEKY--QKTEAYKHFTRKVQEKQKGKRHR----------------GDTG 139
Query: 162 YLFIKDNIDKKEYEGKS 178
+ +++ +K+ EGK
Sbjct: 140 HQTTSESLHEKDVEGKD 156
>gi|26345166|dbj|BAC36233.1| unnamed protein product [Mus musculus]
Length = 204
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPADDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|427775732|gb|AFY63289.1| mitochondrial transcription factor A, partial [Ctenopharyngodon
idella]
Length = 164
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 65/120 (54%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
+PLT Y + +++ +NP +K +++ + ++E+W+ + +K+ ++ +E Y
Sbjct: 1 RPLTAYMTYVKEMQPSFSRQNPGLKNVDIIRKLAEKWRMLTPEQKQPFQDASLVSREQYK 60
Query: 111 QNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNID 170
++ Y +LTP + +EK + K++ KK GKPK+P ++F +F+ ++ +
Sbjct: 61 LALETYKAQLTPAQTAAIAEEKRQRVAKRKAIRRKKELNSLGKPKRPRSAFNIFMAEHFE 120
>gi|441657024|ref|XP_003258299.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor A,
mitochondrial isoform 1 [Nomascus leucogenys]
Length = 285
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 68/119 (57%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + + + + K E+ + +++ W+++ +++KK ++ Y E ++
Sbjct: 89 PKKPISSYLRFSKEQLPIFLFHSIDTKTTELIRRIAQRWRELPDSKKKIYQDAYKAEWQV 148
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
Y + + ++ ++LTP I L KE K KK+ KK GKPK+P +++ +++ +
Sbjct: 149 YKEEISRFKEQLTPSQITSLEKEIMDKHLKKKAMTKKKELTLLGKPKRPRSAYNVYVAE 207
>gi|45935025|gb|AAS79547.1| At4g11080 [Arabidopsis thaliana]
gi|46367464|emb|CAG25858.1| hypothetical protein [Arabidopsis thaliana]
Length = 450
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 25/145 (17%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK+P++ Y + + R + + N +IEV K+ EEWK + E +K + K
Sbjct: 247 PLKPKQPISAYLIYANERRAAL--KGENKSVIEVAKITGEEWKNLSEEQKAPYDKMAKKN 304
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKK----------QKKEKRE-MKKLFRETG-- 152
KEIY Q ++ Y EA+ ++E+E K +KKEK + + K +ET
Sbjct: 305 KEIYLQEMEGYKRTKEEEAMSQKKEEEEFMKLHKQEALQLLKKKEKTDNIIKKTKETAKN 364
Query: 153 ----------KPKKPGNSFYLFIKD 167
KPKKP +S++LF KD
Sbjct: 365 KKKNENVDPNKPKKPTSSYFLFCKD 389
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKKP + YF F R ++E +P I VT ++ +W ++GE EK+ ++ A
Sbjct: 373 PNKPKKPTSSYFLFCKDARKSVLEEHPGINNSTVTAHITLKWMELGEEEKQVYNSKAAAL 432
Query: 106 KEIYAQNVKKYH 117
E Y + V++Y+
Sbjct: 433 MEAYKKEVEEYN 444
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIY 109
K+P TPY + N++ ++NP+ E + ++ +WK I EKK E +Y +KE Y
Sbjct: 134 KRPSTPYILWCKDNWNEVKKQNPDADFKETSNILGAKWKGISAEEKKPYEEKYQADKEAY 193
Query: 110 AQNVKKYHDELTPEAIEFLRKEKEVK 135
Q + K E EA++ L E++ K
Sbjct: 194 LQVITKEKRER--EAMKLLDDEQKQK 217
>gi|241604781|ref|XP_002405946.1| high mobility group protein C, putative [Ixodes scapularis]
gi|215502605|gb|EEC12099.1| high mobility group protein C, putative [Ixodes scapularis]
Length = 134
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 37 QQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKK 96
Q+ +++P PK+P + Y F R +M +NP +K EV K ++E+W E KK
Sbjct: 21 QKVRSDIALPPAPKRPPSGYILFLNDTRKTVMRQNPALKPTEVVKTLAEKWNMADEITKK 80
Query: 97 RLENEYAKEKEIYAQNVKKYHDELTP---EAIEFLRKEKEVKKQKKEKREMKKL 147
+ E + E +A+ + Y LTP EA+ L +K+++ KK+ E L
Sbjct: 81 KYETLSRERMEAFAKEKEAYTSRLTPQQKEALAELSLDKKLRVSKKKLHEGSSL 134
>gi|47215637|emb|CAG01354.1| unnamed protein product [Tetraodon nigroviridis]
Length = 286
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R + R P++ E+TK + EW ++ + +K+R +E +
Sbjct: 43 LPNGPKAPVTGYVRFLNERREHMRARYPDLPFPEITKRLGAEWTRLSQHDKQRYLDEAER 102
Query: 105 EKEIYAQNVKKY 116
EK YAQ +K+Y
Sbjct: 103 EKVQYAQELKEY 114
>gi|255637700|gb|ACU19173.1| unknown [Glycine max]
Length = 478
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 28/148 (18%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+ P++ YF F R + N N +EV K+ SEEWK + E +K+ E K
Sbjct: 264 PLRPRHPMSAYFLFTNDRRAALAAENKNF--LEVPKITSEEWKNMTEEQKRPYEEMAKKN 321
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKE-VKKQKKE-------KREMKKLFRET------ 151
KE YA ++ Y + EA F+++E+E +K QK+E K + + + ++T
Sbjct: 322 KEQYALEMEAYKQKKDEEAAHFMKEEEEQMKLQKQEALQLLKKKEKTENIIKKTKQNRQK 381
Query: 152 ------------GKPKKPGNSFYLFIKD 167
+PKKP +SF L K+
Sbjct: 382 KKQNKDDKNSDPNRPKKPASSFILLSKE 409
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 42/83 (50%)
Query: 44 SIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
S P +PKKP + + + R + E P I + LVS +WK++ E +++ + +
Sbjct: 391 SDPNRPKKPASSFILLSKEARKTLQEERPGISTSTLNALVSLKWKELSEEDRQFWNGQAS 450
Query: 104 KEKEIYAQNVKKYHDELTPEAIE 126
K + Y + +++Y+ L A +
Sbjct: 451 KAMDAYKKELEEYNKSLAATACQ 473
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 55 PYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVK 114
PY + N+I + NP + E++ ++ +WK + EKK E Y EKE Y Q +
Sbjct: 157 PYILWMKDQWNEIKKANPEAEFKEISTMLGAKWKTVSAEEKKPYEGIYHAEKEAYLQVIA 216
Query: 115 KYHDE------LTPE-----AIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYL 163
K E L E A+E L + + K++ ++ + K ++ +P+ P ++++L
Sbjct: 217 KEKRETEAMRLLEDEQKQRTAMELLEQYMQFKQEAEKDGKKNKKEKDPLRPRHPMSAYFL 276
Query: 164 FIKDNIDKKEYEGKSYM 180
F D E K+++
Sbjct: 277 FTNDRRAALAAENKNFL 293
>gi|15237042|ref|NP_192846.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266789|sp|Q9T012.1|HMG13_ARATH RecName: Full=High mobility group B protein 13; AltName:
Full=Nucleosome/chromatin assembly factor group D 13
gi|4850287|emb|CAB43043.1| 98b like protein [Arabidopsis thaliana]
gi|7267807|emb|CAB81209.1| 98b like protein [Arabidopsis thaliana]
gi|22136604|gb|AAM91621.1| putative 98b protein [Arabidopsis thaliana]
gi|332657570|gb|AEE82970.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 446
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 25/145 (17%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK+P++ Y + + R + + N +IEV K+ EEWK + E +K + K
Sbjct: 243 PLKPKQPISAYLIYANERRAAL--KGENKSVIEVAKMAGEEWKNLSEEKKAPYDQMAKKN 300
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKK----------QKKEKRE-MKKLFRETG-- 152
KEIY Q ++ Y EA+ ++E+E K +KKEK + + K +ET
Sbjct: 301 KEIYLQEMEGYKRTKEEEAMSQKKEEEEFMKLHKQEALQLLKKKEKTDNIIKKTKETAKN 360
Query: 153 ----------KPKKPGNSFYLFIKD 167
KPKKP +S++LF KD
Sbjct: 361 KKKNENVDPNKPKKPTSSYFLFCKD 385
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKKP + YF F R ++E +P I VT +S +W ++GE EK+ ++ A+
Sbjct: 369 PNKPKKPTSSYFLFCKDARKSVLEEHPGINNSTVTAHISLKWMELGEEEKQVYNSKAAEL 428
Query: 106 KEIYAQNVKKYH 117
E Y + V++Y+
Sbjct: 429 MEAYKKEVEEYN 440
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIY 109
K+P TPY + N++ ++NP E + ++ +WK I EKK E +Y +KE Y
Sbjct: 130 KRPSTPYILWCKDNWNEVKKQNPEADFKETSNILGAKWKGISAEEKKPYEEKYQADKEAY 189
Query: 110 AQNVKKYHDELTPEAIEFLRKEKEVK 135
Q + K E EA++ L E++ K
Sbjct: 190 LQVITKEKRER--EAMKLLDDEQKQK 213
>gi|449491592|ref|XP_002190233.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related
[Taeniopygia guttata]
Length = 316
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 46/72 (63%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I ++P++ E+TK++ EW K+ +EK+R +E +
Sbjct: 63 LPNGPKAPVTGYVRFLNERREQIRTQHPDLPFPEITKMLGAEWSKLQLSEKQRYLDEAER 122
Query: 105 EKEIYAQNVKKY 116
EK+ Y + +++Y
Sbjct: 123 EKQQYMKELREY 134
>gi|402587874|gb|EJW81808.1| hypothetical protein WUBG_07283, partial [Wuchereria bancrofti]
Length = 139
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%)
Query: 40 SQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLE 99
S L P+ P +PL PY +F ++ K+ NP+ ++ ++ K++ + W+ E+EK
Sbjct: 33 SNSLKPPKPPDRPLVPYMRFSRKMWAKVRAENPDSQLWDIGKVIGQMWRDAPESEKAIYH 92
Query: 100 NEYAKEKEIYAQNVKKYHDELT 121
EY E++ Y + +K YH+
Sbjct: 93 QEYDIERQEYEKALKAYHNSAA 114
>gi|149054159|gb|EDM05976.1| rCG34563, isoform CRA_d [Rattus norvegicus]
Length = 256
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|363743636|ref|XP_424154.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related-like
[Gallus gallus]
Length = 319
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 46/72 (63%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I ++P++ E+TK++ EW K+ +EK+R +E +
Sbjct: 65 LPNGPKAPVTGYVRFLNERREQIRTQHPDLPFPEITKMLGAEWSKLQLSEKQRYLDEAER 124
Query: 105 EKEIYAQNVKKY 116
EK+ Y + +++Y
Sbjct: 125 EKQQYMKELREY 136
>gi|326934316|ref|XP_003213237.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related-like
[Meleagris gallopavo]
Length = 329
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 46/72 (63%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I ++P++ E+TK++ EW K+ +EK+R +E +
Sbjct: 65 LPNGPKAPVTGYVRFLNERREQIRTQHPDLPFPEITKMLGAEWSKLQLSEKQRYLDEAER 124
Query: 105 EKEIYAQNVKKY 116
EK+ Y + +++Y
Sbjct: 125 EKQQYMKELREY 136
>gi|409075359|gb|EKM75740.1| hypothetical protein AGABI1DRAFT_116212 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198009|gb|EKV47935.1| hypothetical protein AGABI2DRAFT_191645 [Agaricus bisporus var.
bisporus H97]
Length = 262
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + Y FQ +IR ++ +++P + E+ ++S+ WKK+ E EK
Sbjct: 78 PNAPKRPASSYILFQNEIRKQLKDQHPELTNAELLNMISDIWKKMSEDEKATYHKLVEDA 137
Query: 106 KEIYAQNVKKYHDELTPEAI 125
KE Y+Q+ K Y D TPE +
Sbjct: 138 KERYSQDKKAY-DSRTPEEV 156
>gi|348541387|ref|XP_003458168.1| PREDICTED: nucleolar transcription factor 1 isoform 2 [Oreochromis
niloticus]
Length = 713
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ + +K++ E+ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITEFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIE 126
KE + +N+ ++ +E PE IE
Sbjct: 169 KEDFEKNMARFKEE-HPELIE 188
>gi|312067699|ref|XP_003136866.1| hypothetical protein LOAG_01279 [Loa loa]
gi|307767980|gb|EFO27214.1| hypothetical protein LOAG_01279 [Loa loa]
Length = 398
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 40 SQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLE 99
S L P+ P +PL PY +F ++ K+ NP+ ++ ++ K++ + W+ E+EK
Sbjct: 33 SNSLKPPKPPDRPLVPYMRFSRKMWAKVRAENPDSQLWDIGKVIGQMWRDAPESEKAIYH 92
Query: 100 NEYAKEKEIYAQNVKKYHD 118
EY E++ Y + +K YH+
Sbjct: 93 QEYDIERQEYEKALKAYHN 111
>gi|392574245|gb|EIW67382.1| hypothetical protein TREMEDRAFT_74569 [Tremella mesenterica DSM
1558]
Length = 351
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + Y FQ ++R+++ + NP I EV ++S++WK + + +K+ E EYAK+
Sbjct: 132 PNAPKRPPSAYIMFQNEVRDQMRKTNPEIAYKEVLGMISQKWKDLSDEQKRVYETEYAKQ 191
Query: 106 KEIYAQNVKKY 116
Y + + Y
Sbjct: 192 VNGYNTSAELY 202
>gi|71142475|emb|CAH60730.1| transcription factor A [Hylobates lar]
Length = 160
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Query: 70 RNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLR 129
+NP+ K E+ + +++ W+++ ++EKK Y + E+Y + + ++ ++LTP I L
Sbjct: 9 QNPDAKTTELVRRIAKHWRELPDSEKKVYREAYKADWEVYKEEISRFKEQLTPSEITSLE 68
Query: 130 KEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDKKEYEGKS 178
KE ++ K++ +K F + GKPK+P +++ +++ + +E EG S
Sbjct: 69 KEILDERLKRKAVTKRKEFIQLGKPKRPRSAYNVYVAERF--QEAEGDS 115
>gi|348541385|ref|XP_003458167.1| PREDICTED: nucleolar transcription factor 1 isoform 1 [Oreochromis
niloticus]
Length = 716
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ + +K++ E+ +E
Sbjct: 111 PDFPKKPLTPYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITEFQRE 170
Query: 106 KEIYAQNVKKYHDELTPEAIE 126
KE + +N+ ++ +E PE IE
Sbjct: 171 KEDFEKNMARFKEE-HPELIE 190
>gi|444730270|gb|ELW70657.1| High mobility group protein 20A [Tupaia chinensis]
Length = 321
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQ 137
++KE Y + +++Y + E +KE EVK++
Sbjct: 156 ADRDKERYMKELEQY------QKTEAYKKEAEVKER 185
>gi|302828472|ref|XP_002945803.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
gi|300268618|gb|EFJ52798.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
Length = 199
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PKK LT + F R+K+ NP + EV KL+ E+WK +G EK E + K+
Sbjct: 78 PNAPKKNLTAFMYFSNAQRDKVKTDNPGVSFGEVGKLLGEKWKSLGANEKSEYEEKAKKD 137
Query: 106 KEIYAQNVKKY 116
KE YA+ ++ Y
Sbjct: 138 KERYAKEMEAY 148
>gi|147898805|ref|NP_001087141.1| high mobility group protein 20A [Xenopus laevis]
gi|82181983|sp|Q6AZF8.1|HM20A_XENLA RecName: Full=High mobility group protein 20A; AltName: Full=HMG
box-containing protein 20A
gi|50603766|gb|AAH78062.1| Hmg20a-prov protein [Xenopus laevis]
Length = 345
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK PLT Y +F + R ++ P++ E+T++V EW K+ EK+ +E K+KE
Sbjct: 101 PKAPLTGYVRFMNERREQLRTERPDVPFPEITRIVGSEWSKLPAHEKQHYLDEAEKDKER 160
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKRE 143
Y + ++KY + T + RK K +K +++++E
Sbjct: 161 YTKELQKYQN--TDAYQTYSRKAKSRQKGRQQRQE 193
>gi|402880799|ref|XP_003903979.1| PREDICTED: transcription factor A, mitochondrial isoform 2 [Papio
anubis]
Length = 205
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 49/83 (59%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + +NP+ K E+ + +++ W+++ ++EKK + Y + E+
Sbjct: 50 PKKPVSSYLRFSKEQLPIFRAQNPDAKTTELVRRIAKHWRELPDSEKKVYQEAYKADWEV 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKE 131
Y + + ++ ++LTP I L KE
Sbjct: 110 YKEEISRFKEQLTPSEITSLEKE 132
>gi|344236149|gb|EGV92252.1| Transcription factor A, mitochondrial [Cricetulus griseus]
Length = 190
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 65/117 (55%)
Query: 53 LTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQN 112
+T Y +F + + ++P+ K+ ++ + ++ W+++ E EKK E ++ + + Y +
Sbjct: 1 MTSYLRFSTEQLPRFKAKHPDAKLSDLVRKIAAAWRELPEEEKKVYEADFRADWKAYKEA 60
Query: 113 VKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNI 169
+ K+ D+LTP + KE K+ KK+ K+ GKPK+P +++ +++ ++
Sbjct: 61 LSKFKDQLTPAQLVSFEKEVRQKRLKKKASVKKRELMLLGKPKRPRSAYNIYVSESF 117
>gi|449266217|gb|EMC77300.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Columba livia]
Length = 294
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I ++P++ E+TK++ EW K+ +EK+R +E +
Sbjct: 50 LPNGPKAPVTGYVRFLNERREQIRTQHPDLPFPEITKMLGAEWSKLQLSEKQRYLDEAER 109
Query: 105 EKEIYAQNVKKYH 117
EK+ Y + +++Y
Sbjct: 110 EKQQYMKELREYQ 122
>gi|66523545|ref|XP_625193.1| PREDICTED: high mobility group protein 20A-like isoform 1 [Apis
mellifera]
Length = 329
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+PLT YF+F R K+ NP + E+TKL++ EW + +K++ + ++KE
Sbjct: 83 PKQPLTGYFRFLNDRREKVRSENPTLSFAEITKLLASEWSTLPADQKQQYLDAAEQDKER 142
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKRE 143
Y +++ D EA +++ +KQ++ K+E
Sbjct: 143 YN---REFSDYKQTEAYRLFSEKQSSEKQQESKKE 174
>gi|159163900|pdb|2CRJ|A Chain A, Solution Structure Of The Hmg Domain Of Mouse Hmg Domain
Protein Hmgx2
Length = 92
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK P+T Y +F + R +I R+P++ E+TK++ EW K+ AEK+R +E KEK+
Sbjct: 8 PKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEKEKQQ 67
Query: 109 YAQNVKKYH 117
Y + + Y
Sbjct: 68 YLKELWAYQ 76
>gi|348517941|ref|XP_003446491.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like
[Oreochromis niloticus]
Length = 474
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y
Sbjct: 67 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLSDEEKQDYLNEYEAEKIEYND 126
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ + G+P Y+ I+ D
Sbjct: 127 SLKAYHN--SPAYLAYINAKNRAEAAMEEESRQRQSRMDKGEP-------YMSIQPAEDP 177
Query: 172 KEYE 175
+Y+
Sbjct: 178 DDYD 181
>gi|380021877|ref|XP_003694783.1| PREDICTED: high mobility group protein 20A-like [Apis florea]
Length = 329
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+PLT YF+F R K+ NP + E+TKL++ EW + +K++ + ++KE
Sbjct: 83 PKQPLTGYFRFLNDRREKVRNENPTLSFAEITKLLASEWSTLPADQKQQYLDAAEQDKER 142
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKRE 143
Y +++ D EA +++ +KQ++ K+E
Sbjct: 143 YN---REFSDYKQTEAYRLFSEKQSSEKQQESKKE 174
>gi|343425092|emb|CBQ68629.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 290
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 74 IKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKE 133
+ I+++ K V EW ++ K R E ++ +EKE Y + + ++ L+PE I+ R+
Sbjct: 140 VDIVKMAKAVGAEWAQLAPNLKARYEAQHEQEKEEYERALAEWKAALSPEDIK--RQNAY 197
Query: 134 VKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
+ QKK+ + R+ KPK+P ++F+ F+ D
Sbjct: 198 IASQKKKGIKGTAFLRDPAKPKRPNSAFFEFLND 231
>gi|165971082|gb|AAI58235.1| ubtf protein [Xenopus (Silurana) tropicalis]
Length = 466
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 51/74 (68%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
PE PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ KE
Sbjct: 109 PEFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQKE 168
Query: 106 KEIYAQNVKKYHDE 119
K + +N+ K+ DE
Sbjct: 169 KLDFERNLAKFRDE 182
>gi|301612132|ref|XP_002935582.1| PREDICTED: nucleolar transcription factor 1-B [Xenopus (Silurana)
tropicalis]
Length = 688
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 51/74 (68%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
PE PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ KE
Sbjct: 109 PEFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQKE 168
Query: 106 KEIYAQNVKKYHDE 119
K + +N+ K+ DE
Sbjct: 169 KLDFERNLAKFRDE 182
>gi|334326649|ref|XP_001364396.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related-like
[Monodelphis domestica]
Length = 503
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I +P++ E+TK++ EW K+ +K+R +E +
Sbjct: 98 LPNGPKAPVTGYVRFLNERREQIRTLHPDLPFPEITKMLGAEWSKLQPTDKQRYLDEAER 157
Query: 105 EKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKE 140
EK+ Y + +++Y EA + ++ + KK KKE
Sbjct: 158 EKQQYMKELREYQQS---EAYKMCAEKLQEKKTKKE 190
>gi|302755040|ref|XP_002960944.1| hypothetical protein SELMODRAFT_73858 [Selaginella moellendorffii]
gi|300171883|gb|EFJ38483.1| hypothetical protein SELMODRAFT_73858 [Selaginella moellendorffii]
Length = 457
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 23/140 (16%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
PEKPK+P T Y + + R +M N N+K+ ++ K++ EEW+ + E + E
Sbjct: 247 PEKPKRPTTGYMAYSEERRPALM--NENLKVPQIGKILGEEWRSMDEKARAPYEKIATDA 304
Query: 106 KEIY-----AQNVKKYHDELTPE-------------AIEFLR---KEKEVKKQKKEKREM 144
K Y A N KK +E+ E +E L+ KE E K +K R+
Sbjct: 305 KATYLTEMEAYNKKKAQEEVVAEQALKEKAKRDKVCGLELLKQKEKEDEAMKAEKAPRKA 364
Query: 145 KKLFRETGKPKKPGNSFYLF 164
K E GKPKK ++ LF
Sbjct: 365 KAKTAEPGKPKKAATAYILF 384
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
PE+ KKPL+ YF + R K+ +NPN I E++ + E WK + E EKK E Y K
Sbjct: 127 PERIKKPLSSYFLWCNDQREKVRAQNPNAGIKELSSIFGELWKSVSEEEKKPYEEIYQKN 186
Query: 106 KEIY-AQNVKKYHDELTPEAIEFLRKEK 132
KE Y Q V K E EA++ L+ EK
Sbjct: 187 KEEYLKQLVGKEKREA--EALKLLQDEK 212
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKK T Y F + R K+ P K E+T LV+ +W ++G EK+ N+ E
Sbjct: 371 PGKPKKAATAYILFGMEYRKKLQAEMPTAKFAELTALVASKWNEMGAEEKQPYVNQAGVE 430
Query: 106 KEIYAQNVKKYHDELTPE 123
K Y + ++++ L+P+
Sbjct: 431 KLKYQEAMEEFK-RLSPD 447
>gi|165970786|gb|AAI58244.1| ubtf protein [Xenopus (Silurana) tropicalis]
Length = 446
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 51/74 (68%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
PE PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ KE
Sbjct: 109 PEFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQKE 168
Query: 106 KEIYAQNVKKYHDE 119
K + +N+ K+ DE
Sbjct: 169 KLDFERNLAKFRDE 182
>gi|291190339|ref|NP_001167104.1| Nucleolar transcription factor 1 [Salmo salar]
gi|223648142|gb|ACN10829.1| Nucleolar transcription factor 1 [Salmo salar]
Length = 665
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ + +K++ E+ +E
Sbjct: 112 PDFPKKPLTPYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITEFQRE 171
Query: 106 KEIYAQNVKKYHDELTPEAIE 126
KE + +N+ ++ ++ PE IE
Sbjct: 172 KESFEKNMARFKEDY-PELIE 191
>gi|224072172|ref|XP_002303636.1| high mobility group family [Populus trichocarpa]
gi|222841068|gb|EEE78615.1| high mobility group family [Populus trichocarpa]
Length = 480
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 24/144 (16%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK+PL+ +F F + R ++ N ++ +EV K+ EEWK + E + E K
Sbjct: 270 PLKPKQPLSAFFLFCNERRAALLAENKSV--LEVAKIAGEEWKNMTEKRRGPYEEVAKKN 327
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKE-VKKQKKEKREMKKLFRET------------- 151
+E Y Q ++ Y EA+ ++E+E VK QK+E ++ K +T
Sbjct: 328 REKYMQEMEAYKQTKDEEAMNLKKEEEELVKVQKQEAWQLLKKKEKTENIIKKTKEQRQK 387
Query: 152 --------GKPKKPGNSFYLFIKD 167
KPKKP +SF LF K+
Sbjct: 388 KQQQNVDPNKPKKPASSFLLFSKE 411
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKKP + + F + R +M+ P I +T ++S +WK++ E E++ ++ A+
Sbjct: 395 PNKPKKPASSFLLFSKETRKSLMDERPGINNSTLTAMISVKWKELNEEERQIWNSKAAEA 454
Query: 106 KEIYAQNVKKYHDELT 121
E Y + +++Y L
Sbjct: 455 MEAYKKELEEYSKSLA 470
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIY 109
K+P PY + N++ + NP+ + +++ ++ +WK I EKK E +Y EKE Y
Sbjct: 156 KRPCPPYSLWCKAQWNEVKKENPDAEFKDISNILGAKWKTITAEEKKPYEEKYQAEKEAY 215
Query: 110 AQNVKKYHDELTPEAIEFLRKEKEVK------------KQKKEKRE-MKKLFRETG--KP 154
+ + K E EA++ L +E++ K KQ+ ++ E KK +E KP
Sbjct: 216 LKVMTKEKRE--SEAMKLLEEEQKQKTAMELLEQYLQFKQEADQEENSKKTKKEKDPLKP 273
Query: 155 KKPGNSFYLFI 165
K+P ++F+LF
Sbjct: 274 KQPLSAFFLFC 284
>gi|348527710|ref|XP_003451362.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related-like
[Oreochromis niloticus]
Length = 294
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R + R P++ E+TK + EW ++ +K+R +E +
Sbjct: 43 LPNGPKAPVTGYVRFLNERREHMRARYPDLPFPEITKRLGAEWTRLAPMDKQRYLDEAER 102
Query: 105 EKEIYAQNVKKYH 117
EK YAQ +K+Y
Sbjct: 103 EKMQYAQELKEYQ 115
>gi|340724328|ref|XP_003400534.1| PREDICTED: high mobility group protein 20A-like [Bombus terrestris]
Length = 329
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+PLT YF+F R K+ NP + E+TKL++ EW + +K++ + ++KE
Sbjct: 83 PKQPLTGYFRFLNDRREKVRTENPTLSFAEITKLLASEWSTLPADQKQQYLDAAEQDKER 142
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKRE 143
Y +++ D EA +++ +KQ++ K+E
Sbjct: 143 YN---REFSDYKQTEAYRLFSEKQSSEKQQENKKE 174
>gi|395513091|ref|XP_003760763.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related
[Sarcophilus harrisii]
Length = 323
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I +P++ E+TK++ EW K+ +K+R +E +
Sbjct: 72 LPNGPKAPVTGYVRFLNERREQIRTLHPDLPFPEITKMLGAEWSKLQPTDKQRYLDEAER 131
Query: 105 EKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKE 140
EK+ Y + +++Y EA + ++ + KK KKE
Sbjct: 132 EKQQYMKELREYQQS---EAYKMCAEKLQEKKAKKE 164
>gi|729742|sp|P40625.1|HMG_TETPY RecName: Full=High mobility group protein; AltName:
Full=Non-histone chromosomal protein
gi|364012|prf||1506384A chromosomal protein HMG
Length = 99
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+PL+ +F F+ +++ + NPN KI E+T +++E+WK + E EKK+ E +
Sbjct: 8 PAPPKRPLSAFFLFKQHNYDQVKKENPNAKITELTSMIAEKWKHVTEKEKKKYEGLQQEA 67
Query: 106 KEIYAQNVKKY 116
K Y ++++ Y
Sbjct: 68 KAKYEKDMQAY 78
>gi|348520102|ref|XP_003447568.1| PREDICTED: high mobility group protein 20A-like [Oreochromis
niloticus]
Length = 291
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
P+ PK PLT Y +F R ++ P++ E+T+++ EW K+ EK+R +E
Sbjct: 38 PMKDSNAPKAPLTGYVRFMNDRREQLRAERPDVPFPEITRMLGNEWSKLPPEEKQRYLDE 97
Query: 102 YAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEK 141
++KE Y + ++KY + T F RK +E +K K+ +
Sbjct: 98 AERDKERYMRELEKY--QKTEAYKHFTRKVQEKQKGKRHR 135
>gi|302847869|ref|XP_002955468.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
gi|300259310|gb|EFJ43539.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
Length = 645
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PKK LT + F R K+ NP I E+ K++ E WK +G EK E AK+
Sbjct: 552 PNAPKKNLTGFMYFSNANREKVKAENPGIAFGEIGKMLGERWKGMGADEKAPYEQMAAKD 611
Query: 106 KEIYAQNVKKY 116
K YA+ +K Y
Sbjct: 612 KVRYAEAMKAY 622
>gi|383854854|ref|XP_003702935.1| PREDICTED: high mobility group protein 20A-like [Megachile
rotundata]
Length = 329
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+PLT YF+F R K+ NP + E+TKL++ EW + +K++ + ++KE
Sbjct: 83 PKQPLTGYFRFLNDRREKVRNENPTLSFAEITKLLASEWSNLPADQKQQYLDAAEQDKER 142
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKRE 143
Y +++ D EA +++ +KQ++ ++E
Sbjct: 143 YN---REFSDYKQTEAYRLFSEKQSSEKQQENRKE 174
>gi|392878936|gb|AFM88300.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F +R KI E P + I ++ K + E+W +G EK E + K
Sbjct: 108 PNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADKL 167
Query: 106 KEIYAQNVKKYHDELTPEAIE 126
KE Y ++V Y + P+++E
Sbjct: 168 KEKYKKDVAAYRAKTKPDSVE 188
>gi|348562680|ref|XP_003467137.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like [Cavia
porcellus]
Length = 746
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 404 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 463
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 464 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 514
Query: 172 KEYE 175
+Y+
Sbjct: 515 DDYD 518
>gi|353229624|emb|CCD75795.1| SWI/SNF-related [Schistosoma mansoni]
Length = 993
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ ++ NP++K+ EV K++ + W+++ + EK EY EK Y +
Sbjct: 59 PLMPYMRYSRKVWEQVKNSNPHLKLWEVGKIIGQMWRELPDDEKLLYVEEYDTEKTQYTE 118
Query: 112 NVKKYHDELTPEA--IEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGN 159
+++YH +A + R EK +++Q +E+R+ R+ G G+
Sbjct: 119 LLRQYHSSPAYQAWLVAKERAEKSMEEQDQERRQSILRSRDRGNELPQGD 168
>gi|256082207|ref|XP_002577351.1| SWI/SNF-related [Schistosoma mansoni]
Length = 994
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ ++ NP++K+ EV K++ + W+++ + EK EY EK Y +
Sbjct: 59 PLMPYMRYSRKVWEQVKNSNPHLKLWEVGKIIGQMWRELPDDEKLLYVEEYDTEKTQYTE 118
Query: 112 NVKKYHDELTPEA--IEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGN 159
+++YH +A + R EK +++Q +E+R+ R+ G G+
Sbjct: 119 LLRQYHSSPAYQAWLVAKERAEKSMEEQDQERRQSILRSRDRGNELPQGD 168
>gi|71019847|ref|XP_760154.1| hypothetical protein UM04007.1 [Ustilago maydis 521]
gi|46099871|gb|EAK85104.1| hypothetical protein UM04007.1 [Ustilago maydis 521]
Length = 286
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 74 IKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKE 133
+ I+++ K V EW ++ K R E ++ +EKE Y + + ++ L+PE I+ R+
Sbjct: 136 VDIVKMAKAVGAEWAQLPAHLKSRYEAQHEQEKEQYERALAEWKAALSPEDIK--RQNAY 193
Query: 134 VKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
+ QKK+ + R+ KPK+P ++F+ F+ D
Sbjct: 194 IASQKKKGIKGTAFLRDPAKPKRPNSAFFEFLND 227
>gi|119574559|gb|EAW54174.1| transcription factor A, mitochondrial, isoform CRA_d [Homo sapiens]
Length = 212
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + +NP+ K E+ + +++ W+++ +++KK ++ Y E ++
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKE---KEVKKQKKEKREMK 145
Y + + ++ ++LTP I L KE K +K++ K+++K
Sbjct: 110 YKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKLK 149
>gi|350590345|ref|XP_003131515.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like [Sus
scrofa]
Length = 176
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 51 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 110
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKP 154
++K YH+ +P + ++ + + +E+ ++ E G+P
Sbjct: 111 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP 151
>gi|339244513|ref|XP_003378182.1| putative HMG box [Trichinella spiralis]
gi|316972927|gb|EFV56573.1| putative HMG box [Trichinella spiralis]
Length = 572
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 41 QPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
QPL+ ++PKKPLT Y + + +K+ +NP + +E+ ++++E+W+K+ +K++ +
Sbjct: 378 QPLA-TDRPKKPLTAYVYYVTKRYSKLRSKNPTLTNLELVRILAEDWRKMDAEKKRKYQR 436
Query: 101 EYAKEKEIYAQNVKKYHD 118
Y EKE Y + ++++++
Sbjct: 437 HYESEKEDYNRQMEEFYE 454
>gi|388857490|emb|CCF48846.1| uncharacterized protein [Ustilago hordei]
Length = 292
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 74 IKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKE 133
+ I+++ K V EW ++ K R E ++ +EKE Y + + ++ L+P+ I+ R+
Sbjct: 142 VDIVKMAKAVGAEWAQLAPQLKARYEAQHEQEKEQYERALAEWKAALSPDDIK--RQNAY 199
Query: 134 VKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
+ QKK+ + R+ KPK+P ++F+ F+ D
Sbjct: 200 IASQKKKGIKGTAFLRDPAKPKRPNSAFFEFLND 233
>gi|410901761|ref|XP_003964364.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like
[Takifugu rubripes]
Length = 462
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y
Sbjct: 67 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLSDEEKQDYLNEYEAEKIEYND 126
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ + G+P Y+ I+ D
Sbjct: 127 SLKAYHN--SPAYLAYVNAKNRAEAAMEEESRQRQSRMDKGEP-------YMSIQPAEDP 177
Query: 172 KEYE 175
+Y+
Sbjct: 178 DDYD 181
>gi|169794013|gb|ACA81403.1| Smarce1 variant 7 [Rattus norvegicus]
Length = 159
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 51 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 110
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKP 154
++K YH+ +P + ++ + + +E+ ++ E G+P
Sbjct: 111 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP 151
>gi|345323382|ref|XP_001507982.2| PREDICTED: transcription factor A, mitochondrial-like
[Ornithorhynchus anatinus]
Length = 263
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 72/133 (54%), Gaps = 9/133 (6%)
Query: 35 LKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAE 94
L + S+ S+ ++P++PLT Y +F Q R+ ++ P++K E+ K +E W+++ E E
Sbjct: 55 LSKSFSKGSSVAKRPRRPLTAYLRFLAQQRSIFKKQTPDMKNEEIVKKSAEMWRELPEVE 114
Query: 95 KKRLENEYAKEKEIYAQNVKKYHDELTPE---AIEFLRKEKEVKKQKKEKREMKKLFRET 151
K+ + E + + + KY +LTP A++ + EK+ K + +K+ +F
Sbjct: 115 KQVYRKAANVDWEAFREEMAKYQAQLTPLQRIAMKIEKLEKQAKSRASKKKRELTVF--- 171
Query: 152 GKPKK---PGNSF 161
GKPK+ P N F
Sbjct: 172 GKPKETRLPQNIF 184
>gi|301615380|ref|XP_002937148.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor A,
mitochondrial [Xenopus (Silurana) tropicalis]
Length = 291
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 22/195 (11%)
Query: 6 LTTGVFTGG---NVFNLRSCLMPHLNSVTTAGLKQQTS------QPLSIPEKPKKPLTPY 56
L GV GG ++ + S SV++ L Q S + + E PK+PLT Y
Sbjct: 5 LCRGV--GGLLRSLAGINSSQAARCTSVSSGILGLQCSPFRWFSKGATSSEYPKRPLTAY 62
Query: 57 FKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK--KRLENEYAKEKEIYAQNV- 113
++ + R K+ ++ P K++++TK+++ EWK + AEK K Y + +NV
Sbjct: 63 LRYSIEQRPKLHKQYPEAKMMDLTKIIALEWKGLPSAEKEVKIYRVLYXSLCDWLIKNVP 122
Query: 114 -KKYHDE------LTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIK 166
+Y L+P +E R+++ + K++ K+ G+PK+P + F +F+
Sbjct: 123 PMRYSRVARLVLLLSPMQLELHREQRRQRLAKRKSVRKKRELTVLGRPKRPRSPFNIFMS 182
Query: 167 DNI-DKKEYEGKSYM 180
++ D K +S M
Sbjct: 183 EHFQDAKGASSQSKM 197
>gi|449266367|gb|EMC77420.1| High mobility group protein 20A [Columba livia]
Length = 345
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 94 PLRDTNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKRRYLDE 153
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 154 ADRDKERYMRELEQY 168
>gi|169793997|gb|ACA81395.1| Smarce1 variant 10 [Homo sapiens]
gi|169794003|gb|ACA81398.1| Smarce1 variant 7 [Mus musculus]
Length = 153
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 51 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 110
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKP 154
++K YH+ +P + ++ + + +E+ ++ E G+P
Sbjct: 111 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP 151
>gi|432867565|ref|XP_004071245.1| PREDICTED: nucleolar transcription factor 1-like [Oryzias latipes]
Length = 740
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S++++++ + +KK+ ++ ++
Sbjct: 101 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYRELPDKKKKKYVEDFLRD 160
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
KE + ++ K+ +E P+ +E + K
Sbjct: 161 KETFVHSMSKFREE-HPDLVETITK 184
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 30 VTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKK 89
+ K+ S+ + PEKPK+P++ F F + R K+ + P++ EVT+ ++ W
Sbjct: 381 ANSPATKKPASKAKANPEKPKRPISAMFIFAEEKRQKLQQERPDLSDSEVTRCLARMWND 440
Query: 90 IGEAEK---KRLE 99
+ + +K KRLE
Sbjct: 441 LPDKKKEKYKRLE 453
>gi|444722693|gb|ELW63375.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1 [Tupaia chinensis]
Length = 386
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 64/120 (53%), Gaps = 9/120 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 51 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYVNEYEAEKIEYNE 110
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKP-------KKPGNSFYLF 164
++K YH+ +P + ++ ++ + +E ++ E G+P + PG+S F
Sbjct: 111 SMKAYHN--SPAYLAYINAKRRAEAALEEGSRQRQSRMERGEPYLSIQPAEDPGDSDEGF 168
>gi|387016388|gb|AFJ50313.1| High mobility group protein 20A-like [Crotalus adamanteus]
Length = 345
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 94 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKRRYLDE 153
Query: 102 YAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKRE 143
++KE Y + +++Y + T F RK ++ +K K ++E
Sbjct: 154 ADRDKERYMKELEQY--QKTEAYKVFSRKTQDRQKGKSHRQE 193
>gi|431920081|gb|ELK18129.1| High mobility group protein B3 [Pteropus alecto]
Length = 255
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 142 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKL 201
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 202 KEKYEKDVADY 212
>gi|71896259|ref|NP_001025565.1| high mobility group protein 20A [Gallus gallus]
gi|75571328|sp|Q5ZKF4.1|HM20A_CHICK RecName: Full=High mobility group protein 20A; AltName: Full=HMG
box-containing protein 20A
gi|53131076|emb|CAG31789.1| hypothetical protein RCJMB04_11c24 [Gallus gallus]
Length = 348
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 97 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKRRYLDE 156
Query: 102 YAKEKEIYAQNVKKYH 117
++KE Y + +++Y
Sbjct: 157 ADRDKERYMRELEQYQ 172
>gi|399498566|ref|NP_001257711.1| transcription factor A, mitochondrial isoform 2 precursor [Homo
sapiens]
gi|426364810|ref|XP_004049487.1| PREDICTED: transcription factor A, mitochondrial isoform 2 [Gorilla
gorilla gorilla]
Length = 214
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 50/83 (60%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP++ Y +F + +NP+ K E+ + +++ W+++ +++KK ++ Y E ++
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 109
Query: 109 YAQNVKKYHDELTPEAIEFLRKE 131
Y + + ++ ++LTP I L KE
Sbjct: 110 YKEEISRFKEQLTPSQIMSLEKE 132
>gi|443897570|dbj|GAC74910.1| HMG box-containing protein [Pseudozyma antarctica T-34]
Length = 280
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 74 IKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKE 133
+ I+++ K V EW ++ +K R E ++ +EKE Y + + ++ L+P+ I+ R+
Sbjct: 130 VDIVKMAKAVGAEWAQLPPNQKARYEAQHEQEKEEYERALAEWKAALSPDDIK--RQNAY 187
Query: 134 VKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
+ QKK+ + R+ KPK+P ++F+ F+ D
Sbjct: 188 IASQKKKGIKGTAFLRDPAKPKRPNSAFFEFLND 221
>gi|444730168|gb|ELW70558.1| High mobility group protein B3 [Tupaia chinensis]
Length = 369
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+PL+ +F F + R KI NP I I +V K + + W + ++EK+ + AK
Sbjct: 90 PNAPKRPLSGFFLFSSEFRPKIKSTNPGISIGDVAKKLGDMWNNLSDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVANY 160
>gi|410925543|ref|XP_003976240.1| PREDICTED: nucleolar transcription factor 1-B-like isoform 2
[Takifugu rubripes]
Length = 654
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ + +K++ E+ +E
Sbjct: 111 PDFPKKPLTPYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITEFQRE 170
Query: 106 KEIYAQNVKKYHDELTPEAIE 126
KE + +N+ ++ ++ PE IE
Sbjct: 171 KEEFEKNMARFKED-HPELIE 190
>gi|452982812|gb|EME82570.1| hypothetical protein MYCFIDRAFT_79010 [Pseudocercospora fijiensis
CIRAD86]
Length = 389
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKI---MERNP---NIKIIEVTKLVSEEWKKIGEAEKKRLE 99
P PK+PLT YF++ ++R I ++ NP IK +++K+ +E WK +G+A++K
Sbjct: 147 PNAPKRPLTAYFRYLKEVRPLIAAEVQNNPPSDGIKAGDISKIATERWKALGDAKRKPYH 206
Query: 100 NEYAKEKEIYAQNVKKY 116
Y E Y VK+Y
Sbjct: 207 QAYQSELAAYEAAVKEY 223
>gi|326926383|ref|XP_003209381.1| PREDICTED: high mobility group protein 20A-like [Meleagris
gallopavo]
Length = 348
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 97 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKRRYLDE 156
Query: 102 YAKEKEIYAQNVKKYH 117
++KE Y + +++Y
Sbjct: 157 ADRDKERYMRELEQYQ 172
>gi|224061734|ref|XP_002194749.1| PREDICTED: high mobility group protein 20A [Taeniopygia guttata]
Length = 348
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 97 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKRRYLDE 156
Query: 102 YAKEKEIYAQNVKKYH 117
++KE Y + +++Y
Sbjct: 157 ADRDKERYMRELEQYQ 172
>gi|159478607|ref|XP_001697394.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158274552|gb|EDP00334.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 255
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 25 PHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVS 84
P + S G +++ S PKKP+TP+ F +R + NP I E+ K++
Sbjct: 104 PAVESARLGGNERKASGA------PKKPMTPFLHFSNAVRESVKAENPGIAFGELAKVIG 157
Query: 85 EEWKKIGEAEKKRLENEYAKEKEIYAQNVKKY 116
E+W K+ EK + ++K+ YA+ ++ Y
Sbjct: 158 EKWAKLSAQEKAEYVKRFDEDKQRYAREMQDY 189
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 53 LTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQN 112
+T + F +R + +P I EV+K++ E+W +I EK E + A++K+ Y +
Sbjct: 1 MTAFLLFSNAMRAAVKAESPGIDFGEVSKILGEKWARICAKEKAEYEAKAAEDKDRYLRE 60
Query: 113 VKKY 116
+++Y
Sbjct: 61 MQEY 64
>gi|390478817|ref|XP_002762012.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like isoform
2 [Callithrix jacchus]
Length = 411
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSHMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|395501084|ref|XP_003754928.1| PREDICTED: high mobility group protein 20A [Sarcophilus harrisii]
Length = 347
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKYHDELTPEAIE-FLRKEKEVKKQKKEKRE 143
++KE Y + +++Y EA + F RK ++ +K K ++E
Sbjct: 156 ADRDKERYMKELEQYQ---KTEAYKVFSRKAQDRQKGKSHRQE 195
>gi|410925541|ref|XP_003976239.1| PREDICTED: nucleolar transcription factor 1-B-like isoform 1
[Takifugu rubripes]
Length = 709
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ + +K++ E+ +E
Sbjct: 111 PDFPKKPLTPYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITEFQRE 170
Query: 106 KEIYAQNVKKYHDELTPEAIE 126
KE + +N+ ++ ++ PE IE
Sbjct: 171 KEEFEKNMARFKED-HPELIE 190
>gi|338711935|ref|XP_003362621.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Equus
caballus]
Length = 393
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 51 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 110
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 111 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 161
Query: 172 KEYE 175
+Y+
Sbjct: 162 DDYD 165
>gi|149723846|ref|XP_001500209.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 1
[Equus caballus]
Length = 411
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|148693920|gb|EDL25867.1| high mobility group 20A, isoform CRA_c [Mus musculus]
Length = 403
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 119 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 178
Query: 102 YAKEKEIYAQNVKKYH 117
++KE Y + +++Y
Sbjct: 179 ADRDKERYMKELEQYQ 194
>gi|126272184|ref|XP_001362258.1| PREDICTED: high mobility group protein 20A [Monodelphis domestica]
Length = 347
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKYHDELTPEAIE-FLRKEKEVKKQKKEKRE 143
++KE Y + +++Y EA + F RK ++ +K K ++E
Sbjct: 156 ADRDKERYMKELEQYQ---KTEAYKVFSRKTQDRQKGKSHRQE 195
>gi|71142473|emb|CAH60729.1| transcription factor A [Pongo pygmaeus]
Length = 160
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Query: 70 RNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLR 129
+NP+ K E+ + +++ W+++ +++KK ++ Y E ++Y + + ++ ++LTP I L
Sbjct: 9 QNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLE 68
Query: 130 KEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDKKEYEGKS 178
KE K K++ KK GKPK+P +++ +++ + +E +G S
Sbjct: 69 KEITDKHLKRKAMAKKKELTLLGKPKRPRSAYNVYVAERF--QEVQGDS 115
>gi|45946405|gb|AAH68257.1| Hmg20a protein [Mus musculus]
Length = 379
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 95 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 154
Query: 102 YAKEKEIYAQNVKKYH 117
++KE Y + +++Y
Sbjct: 155 ADRDKERYMKELEQYQ 170
>gi|327283394|ref|XP_003226426.1| PREDICTED: high mobility group protein 20A-like [Anolis
carolinensis]
Length = 347
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKRRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMRELEQY 170
>gi|410908083|ref|XP_003967520.1| PREDICTED: high mobility group protein 20A-like [Takifugu rubripes]
Length = 291
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
P+ PK PLT Y +F R ++ P++ E+T+++ EW K+ EK+R +E
Sbjct: 38 PMKDSNAPKAPLTGYVRFMNDRREQLRAERPDVPFPEITRMLGNEWSKLPPEEKQRYLDE 97
Query: 102 YAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEK 141
++KE Y + ++KY + T F RK +E +K K+ +
Sbjct: 98 AERDKERYMRELEKY--QKTEAYKHFKRKVQEKQKGKRNR 135
>gi|328909415|gb|AEB61375.1| high mobility group protein 20A-like protein, partial [Equus
caballus]
Length = 300
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|431893641|gb|ELK03462.1| High mobility group protein 20A [Pteropus alecto]
Length = 367
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 116 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 175
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 176 ADRDKERYMKELEQY 190
>gi|26333131|dbj|BAC30283.1| unnamed protein product [Mus musculus]
Length = 379
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 95 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 154
Query: 102 YAKEKEIYAQNVKKYH 117
++KE Y + +++Y
Sbjct: 155 ADRDKERYMKELEQYQ 170
>gi|391332437|ref|XP_003740641.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like
[Metaseiulus occidentalis]
Length = 376
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ +NP++K+ +V KL+ + WK++ E K+ ++Y +EK Y +
Sbjct: 72 PLMPYLRYSRKVWDQVKAQNPDMKLWDVGKLIGQMWKELPEESKQVYIDDYEQEKAEYNE 131
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFR 149
N+K YH +P ++ + ++ +E+ + +KL R
Sbjct: 132 NLKNYHS--SPAYQSYVANKVRAQQAAEEREQNEKLGR 167
>gi|344235385|gb|EGV91488.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1 [Cricetulus griseus]
Length = 144
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 17 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 76
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKP 154
++K YH+ +P + ++ + + +E+ ++ E G+P
Sbjct: 77 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP 117
>gi|432960800|ref|XP_004086471.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like
[Oryzias latipes]
Length = 479
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y
Sbjct: 100 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNEYEAEKIEYND 159
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ + G+P Y+ I+ D
Sbjct: 160 SLKAYHN--SPAYLAYVNAKNRAEAAMEEESRQRQSRLDKGEP-------YMSIQPAEDP 210
Query: 172 KEYE 175
+Y+
Sbjct: 211 DDYD 214
>gi|427784853|gb|JAA57878.1| Putative transcription factor [Rhipicephalus pulchellus]
Length = 211
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Query: 21 SCLMPHLNSVTTAGLK-QQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEV 79
SC L + GL Q+ S ++P PK+P + + F R +++ NP + EV
Sbjct: 27 SCCA-RLTQNSARGLATQKHSSTGTLPPAPKRPPSGFILFAADTRKTVLKENPALTPTEV 85
Query: 80 TKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKK 139
K V+ +WK + + + + E Y + Y +LT + E L + + KK K
Sbjct: 86 IKAVAGKWKTADDVTRNKYAALARERFEQYEKEKAAYTSQLTEQQREALEEVRLDKKLKI 145
Query: 140 EKREMKKLFRETGKPKKPGNSFYLF 164
KR + +E KPK +++ LF
Sbjct: 146 TKRRLNDKLKELDKPKAAQSAYVLF 170
>gi|11275990|gb|AAG33853.1| transcription factor A [Sus scrofa]
Length = 149
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 56/94 (59%)
Query: 72 PNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKE 131
P+ K E+ K ++E W+++ ++EKK E+ Y + ++Y + V + ++LTP + L KE
Sbjct: 1 PDAKTTELIKKIAELWRELPDSEKKIYEDAYRADWQVYKEEVNRIQEQLTPSQMVSLEKE 60
Query: 132 KEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
K+ KK+ K+ GKPK+P +++ +FI
Sbjct: 61 IMQKRLKKKALIKKRELTMLGKPKRPRSAYNIFI 94
>gi|281338637|gb|EFB14221.1| hypothetical protein PANDA_014002 [Ailuropoda melanoleuca]
Length = 168
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|148693919|gb|EDL25866.1| high mobility group 20A, isoform CRA_b [Mus musculus]
Length = 370
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 119 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 178
Query: 102 YAKEKEIYAQNVKKYH 117
++KE Y + +++Y
Sbjct: 179 ADRDKERYMKELEQYQ 194
>gi|347921933|ref|NP_990626.2| high mobility group protein B3 [Gallus gallus]
Length = 217
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + + EK+ N+ AK
Sbjct: 105 PNAPKRPPSAFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKL 164
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 165 KEKYEKDVADY 175
>gi|403304927|ref|XP_003943030.1| PREDICTED: high mobility group protein 20A [Saimiri boliviensis
boliviensis]
Length = 347
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|302673176|ref|XP_003026275.1| hypothetical protein SCHCODRAFT_62473 [Schizophyllum commune H4-8]
gi|300099956|gb|EFI91372.1| hypothetical protein SCHCODRAFT_62473 [Schizophyllum commune H4-8]
Length = 81
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P T Y +Q R + E+NP + E+ + +SE WK + E EK E + AK
Sbjct: 11 PNAPKRPATSYILYQNDCRQSMKEKNPGLHNTELLRYISETWKSLPEQEKSSYEAKAAKL 70
Query: 106 KEIYAQNVKKY 116
K Y V++Y
Sbjct: 71 KHDYEDAVREY 81
>gi|291387730|ref|XP_002710388.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin e1 [Oryctolagus cuniculus]
Length = 411
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
K L PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y
Sbjct: 68 KLLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYN 127
Query: 111 QNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNID 170
+++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 128 ESMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAED 178
Query: 171 KKEYE 175
+Y+
Sbjct: 179 PDDYD 183
>gi|335774950|gb|AEH58410.1| high mobility group protein 20A-like protein [Equus caballus]
Length = 347
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|729728|sp|P40618.2|HMGB3_CHICK RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|63494|emb|CAA45065.1| HMG2a [Gallus gallus]
Length = 202
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + + EK+ N+ AK
Sbjct: 90 PNAPKRPPSAFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|74000793|ref|XP_853367.1| PREDICTED: high mobility group protein 20A isoform 2 [Canis lupus
familiaris]
Length = 347
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|354471461|ref|XP_003497961.1| PREDICTED: high mobility group protein 20A-like [Cricetulus
griseus]
gi|344247669|gb|EGW03773.1| High mobility group protein 20A [Cricetulus griseus]
Length = 347
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|148236717|ref|NP_001079429.1| nucleolar transcription factor 1-B [Xenopus laevis]
gi|65265|emb|CAA42523.1| a xenopus upstream binding factor [Xenopus laevis]
Length = 701
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 52/74 (70%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
PE PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PEFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDE 119
K+ + +N+ K+ +E
Sbjct: 169 KQDFERNMAKFREE 182
>gi|228024|prf||1715211A ribosomal transcription factor xUBF2
Length = 701
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 52/74 (70%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
PE PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PEFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDE 119
K+ + +N+ K+ +E
Sbjct: 169 KQDFERNMAKFREE 182
>gi|27503844|gb|AAH42232.1| Ubtf-b protein [Xenopus laevis]
Length = 701
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 52/74 (70%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
PE PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PEFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDE 119
K+ + +N+ K+ +E
Sbjct: 169 KQDFERNMAKFREE 182
>gi|136657|sp|P25980.1|UBF1B_XENLA RecName: Full=Nucleolar transcription factor 1-B; AltName:
Full=Upstream-binding factor 1-B; Short=UBF-1-B;
Short=xUBF-2
gi|65201|emb|CAA40794.1| RNA polymerase I transcription factor [Xenopus laevis]
Length = 701
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 52/74 (70%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
PE PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PEFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDE 119
K+ + +N+ K+ +E
Sbjct: 169 KQDFERNMAKFREE 182
>gi|391339670|ref|XP_003744170.1| PREDICTED: uncharacterized protein LOC100897488 [Metaseiulus
occidentalis]
Length = 247
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 15 NVFNLRSCLMPHLNSVTTAGLKQQ-----TSQPLSIPEKPKKPLT-PYFKFQGQIRNKIM 68
N+ N + + +N + T L + IP P+KP + PY +F +
Sbjct: 3 NLLNRGNSFVQAVNRLATTRLTSRGDFSTVKSSRVIP--PRKPWSSPYTQFIASEFRAVA 60
Query: 69 ERNPNIKIIEVTKLVSEEWKKIGEAEKKR---LENEYAKEK-EIYAQNVKKYHDELTPEA 124
E NP K ++ KL+SE W+ + + +++ L +E KE+ ++Y + V + TPE
Sbjct: 61 EENPEQKQTDIMKLMSERWRSLDDETREKYRILNDELLKERQDLYEEEVANW----TPEK 116
Query: 125 IEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
+ +++++K + KRE++ L + GKPK+ LF+++
Sbjct: 117 GKLAEADRKLRKIARVKREIRLLEKSLGKPKRVCPEASLFVRE 159
>gi|426248262|ref|XP_004017883.1| PREDICTED: high mobility group protein 20A [Ovis aries]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|410083317|ref|XP_003959236.1| hypothetical protein KAFR_0J00330 [Kazachstania africana CBS 2517]
gi|372465827|emb|CCF60101.1| hypothetical protein KAFR_0J00330 [Kazachstania africana CBS 2517]
Length = 485
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
PK+P P+ +F +IR I++ NPN+ +IE+TKL+ E W+ + EK + + Y
Sbjct: 397 PKRPSGPFIQFTQEIRPIIVKENPNLNLIEITKLIGERWRNLAAEEKTKYTDAY 450
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P + YF F IRN ++ + P K+ E++KL S WK++ + EKK +E+ E
Sbjct: 324 PKRPSSAYFLFSMSIRNDLLRQYPEAKVPELSKLASARWKELTDDEKKPFYDEFRINWEK 383
Query: 109 YAQNVKKYHDELTP 122
Y +Y L P
Sbjct: 384 YRVLRDEYEKTLPP 397
>gi|301779535|ref|XP_002925179.1| PREDICTED: high mobility group protein 20A-like [Ailuropoda
melanoleuca]
gi|281343408|gb|EFB18992.1| hypothetical protein PANDA_014629 [Ailuropoda melanoleuca]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|15022805|ref|NP_080088.1| high mobility group protein 20A [Mus musculus]
gi|81917204|sp|Q9DC33.1|HM20A_MOUSE RecName: Full=High mobility group protein 20A; AltName: Full=HMG
box-containing protein 20A; AltName: Full=HMG
domain-containing protein HMGX1; AltName: Full=Inhibitor
of BRAF35; Short=iBRAF
gi|12835873|dbj|BAB23397.1| unnamed protein product [Mus musculus]
gi|15489430|gb|AAH13804.1| High mobility group 20A [Mus musculus]
gi|74140901|dbj|BAE22054.1| unnamed protein product [Mus musculus]
gi|148693918|gb|EDL25865.1| high mobility group 20A, isoform CRA_a [Mus musculus]
Length = 346
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 95 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 154
Query: 102 YAKEKEIYAQNVKKYH 117
++KE Y + +++Y
Sbjct: 155 ADRDKERYMKELEQYQ 170
>gi|432853517|ref|XP_004067746.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related-like
[Oryzias latipes]
Length = 292
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R ++ R P++ E+TK + EW + +K+R +E +
Sbjct: 43 LPNGPKAPVTGYVRFLNERREQMRARYPDLPFPEITKRLGSEWTHLAPNDKQRYLDEAER 102
Query: 105 EKEIYAQNVKKY 116
EK YAQ +K+Y
Sbjct: 103 EKVQYAQELKEY 114
>gi|405120934|gb|AFR95704.1| nonhistone protein 6 [Cryptococcus neoformans var. grubii H99]
Length = 240
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA-- 103
P PK+P + Y FQ ++R+ I NP + +V +++S+ WK++ ++EKK E+ YA
Sbjct: 91 PNAPKRPPSAYILFQNEVRDDIRTSNPGMPYKDVLQIISQRWKELPDSEKKIFEDAYAAA 150
Query: 104 -----KEKEIYA 110
E+E YA
Sbjct: 151 HNNFRAEEEAYA 162
>gi|395822564|ref|XP_003784587.1| PREDICTED: high mobility group protein 20A [Otolemur garnettii]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|432116515|gb|ELK37328.1| High mobility group protein 20A [Myotis davidii]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|395545985|ref|XP_003774876.1| PREDICTED: high mobility group protein B3-like [Sarcophilus
harrisii]
Length = 201
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|344284246|ref|XP_003413879.1| PREDICTED: high mobility group protein 20A [Loxodonta africana]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|350586820|ref|XP_003482285.1| PREDICTED: high mobility group protein 20A [Sus scrofa]
gi|350596463|ref|XP_003484278.1| PREDICTED: high mobility group protein 20A-like [Sus scrofa]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|149410917|ref|XP_001509199.1| PREDICTED: high mobility group protein B3-like isoform 1
[Ornithorhynchus anatinus]
gi|345306624|ref|XP_003428488.1| PREDICTED: high mobility group protein B3-like isoform 2
[Ornithorhynchus anatinus]
Length = 201
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|440909289|gb|ELR59212.1| High mobility group protein 20A [Bos grunniens mutus]
Length = 351
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|115497282|ref|NP_001069105.1| high mobility group protein 20A [Bos taurus]
gi|111307054|gb|AAI20109.1| High-mobility group 20A [Bos taurus]
gi|296475408|tpg|DAA17523.1| TPA: high-mobility group 20A [Bos taurus]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|355694827|gb|AER99798.1| high-mobility group 20A [Mustela putorius furo]
Length = 349
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|12857100|dbj|BAB30892.1| unnamed protein product [Mus musculus]
Length = 346
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 95 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 154
Query: 102 YAKEKEIYAQNVKKYH 117
++KE Y + +++Y
Sbjct: 155 ADRDKERYMKELEQYQ 170
>gi|296236823|ref|XP_002763494.1| PREDICTED: high mobility group protein 20A [Callithrix jacchus]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|302767286|ref|XP_002967063.1| hypothetical protein SELMODRAFT_144662 [Selaginella moellendorffii]
gi|300165054|gb|EFJ31662.1| hypothetical protein SELMODRAFT_144662 [Selaginella moellendorffii]
Length = 430
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
PE+ KKPL+ YF + R K+ +NPN I +++ + E WK + + EKK E Y K
Sbjct: 101 PERIKKPLSSYFLWCNDQREKVRAQNPNAGIKDLSSIFGELWKSVSDEEKKPYEEIYQKN 160
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEK 132
KE Y + V K E EA++ L+ EK
Sbjct: 161 KEEYLKLVSKEKRE--AEALKLLQDEK 185
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKK T Y F + R K+ P K E+T LV+ +W ++G EK+ ++ E
Sbjct: 344 PGKPKKAATAYILFGMEYRKKLQAEMPTAKFAELTALVASKWNEMGAEEKQPYVDQAGVE 403
Query: 106 KEIYAQNVKKYHDELTPE 123
K+ Y + ++++ L+P+
Sbjct: 404 KQKYQEAMEEFK-RLSPD 420
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 26/138 (18%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIY- 109
+P T Y + + R +M N N+K+ ++ K++ EEW+ + E + E K Y
Sbjct: 222 RPTTGYMAYSEERRPALM--NENLKVPQIGKILGEEWRSMDEKARAPYEKIATDAKATYL 279
Query: 110 ----AQNVKKYHDELTPE-------------AIEFLR---KEKEVKKQKKEK---REMKK 146
A N KK +E+ E +E L+ KE EVKK K + R+ K
Sbjct: 280 TEMEAYNKKKAQEEVVAEQALKEKAKRDKVCGLELLKQKEKEDEVKKAMKAEKAPRKAKA 339
Query: 147 LFRETGKPKKPGNSFYLF 164
E GKPKK ++ LF
Sbjct: 340 KTAEPGKPKKAATAYILF 357
>gi|291411606|ref|XP_002722079.1| PREDICTED: high-mobility group 20A [Oryctolagus cuniculus]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|224002190|ref|XP_002290767.1| structure specific recognition protein 1 [Thalassiosira pseudonana
CCMP1335]
gi|220974189|gb|EED92519.1| structure specific recognition protein 1 [Thalassiosira pseudonana
CCMP1335]
Length = 765
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P+ PY F +R ++ E NP++ + +V+K + +K I E EK + +++
Sbjct: 637 PNAPKRPMNPYMLFANSVRAQVREENPDMSMGDVSKEIGIRYKAIDEKEKAKWQSKADAA 696
Query: 106 KEIYAQNVKKY 116
KE+Y + + +Y
Sbjct: 697 KEVYKKEMAQY 707
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ + F R I NP+ E+ KLV E+K + +EK + E A +
Sbjct: 538 PNAPKRGLSAFNFFTSAKRGDIKAANPDASFAELAKLVGAEFKGLSASEKAKYEELAAND 597
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLF 164
K+ Y + ++ Y + PE E E + +K K+ K ++ PK+P N + LF
Sbjct: 598 KKRYEKEMESY---VPPE--EDSDDESDGEKTTKKPSAKKAK-KDPNAPKRPMNPYMLF 650
>gi|30584799|gb|AAP36652.1| Homo sapiens high-mobility group 20A [synthetic construct]
gi|61370777|gb|AAX43550.1| high-mobility group 20A [synthetic construct]
gi|61370782|gb|AAX43551.1| high-mobility group 20A [synthetic construct]
Length = 348
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|410960786|ref|XP_003986968.1| PREDICTED: high mobility group protein 20A [Felis catus]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|57112857|ref|XP_538194.1| PREDICTED: high mobility group protein B3 [Canis lupus familiaris]
gi|338729649|ref|XP_001505130.3| PREDICTED: high mobility group protein B3-like isoform 1 [Equus
caballus]
Length = 201
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|417396975|gb|JAA45521.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 200
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|351694875|gb|EHA97793.1| High mobility group protein 20A [Heterocephalus glaber]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|301778413|ref|XP_002924621.1| PREDICTED: high mobility group protein B3-like [Ailuropoda
melanoleuca]
Length = 201
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|149410669|ref|XP_001505909.1| PREDICTED: high mobility group protein 20A [Ornithorhynchus
anatinus]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKYH 117
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQYQ 171
>gi|75707631|gb|ABA26278.1| inhibitor of BRAF35 [Mus musculus]
Length = 342
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 91 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 150
Query: 102 YAKEKEIYAQNVKKYH 117
++KE Y + +++Y
Sbjct: 151 ADRDKERYMKELEQYQ 166
>gi|410989557|ref|XP_004001438.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Felis catus]
Length = 201
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|114658303|ref|XP_510687.2| PREDICTED: high mobility group protein 20A isoform 2 [Pan
troglodytes]
gi|410296376|gb|JAA26788.1| high mobility group 20A [Pan troglodytes]
gi|410296378|gb|JAA26789.1| high mobility group 20A [Pan troglodytes]
gi|410352811|gb|JAA43009.1| high mobility group 20A [Pan troglodytes]
gi|410352813|gb|JAA43010.1| high mobility group 20A [Pan troglodytes]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|62897761|dbj|BAD96820.1| high-mobility group 20A variant [Homo sapiens]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|348555623|ref|XP_003463623.1| PREDICTED: high mobility group protein 20A-like [Cavia porcellus]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|344285474|ref|XP_003414486.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like [Loxodonta
africana]
Length = 473
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 131 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 190
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 191 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 241
Query: 172 KEYE 175
+Y+
Sbjct: 242 DDYD 245
>gi|297697200|ref|XP_002825755.1| PREDICTED: high mobility group protein 20A isoform 1 [Pongo abelii]
gi|332252689|ref|XP_003275487.1| PREDICTED: high mobility group protein 20A [Nomascus leucogenys]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|157822803|ref|NP_001101620.1| high mobility group protein 20A [Rattus norvegicus]
gi|149041741|gb|EDL95582.1| high mobility group 20A (predicted) [Rattus norvegicus]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKYH 117
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQYQ 171
>gi|321259389|ref|XP_003194415.1| nonhistone protein 6 [Cryptococcus gattii WM276]
gi|317460886|gb|ADV22628.1| nonhistone protein 6, putative [Cryptococcus gattii WM276]
Length = 237
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA-- 103
P PK+P + Y FQ ++R+ I NP + +V +++S+ WK++ ++EKK E+ YA
Sbjct: 91 PNAPKRPPSAYILFQNEVRDDIRTSNPGMPYKDVLQIISQRWKELPDSEKKIFEDAYAAA 150
Query: 104 -----KEKEIYA 110
E+E YA
Sbjct: 151 HNNFRAEEEAYA 162
>gi|8922633|ref|NP_060670.1| high mobility group protein 20A [Homo sapiens]
gi|387763258|ref|NP_001248493.1| high mobility group protein 20A [Macaca mulatta]
gi|397479766|ref|XP_003811178.1| PREDICTED: high mobility group protein 20A isoform 1 [Pan paniscus]
gi|397479768|ref|XP_003811179.1| PREDICTED: high mobility group protein 20A isoform 2 [Pan paniscus]
gi|402874986|ref|XP_003901303.1| PREDICTED: high mobility group protein 20A isoform 1 [Papio anubis]
gi|402874988|ref|XP_003901304.1| PREDICTED: high mobility group protein 20A isoform 2 [Papio anubis]
gi|74734297|sp|Q9NP66.1|HM20A_HUMAN RecName: Full=High mobility group protein 20A; AltName: Full=HMG
box-containing protein 20A; AltName: Full=HMG
domain-containing protein 1; AltName: Full=HMG
domain-containing protein HMGX1
gi|7673025|gb|AAF66706.1|AF146222_1 HMG domain protein HMGX1 [Homo sapiens]
gi|7022956|dbj|BAA91782.1| unnamed protein product [Homo sapiens]
gi|7799126|emb|CAB90816.1| HMG20A [Homo sapiens]
gi|18314393|gb|AAH21959.1| High-mobility group 20A [Homo sapiens]
gi|30582271|gb|AAP35362.1| high-mobility group 20A [Homo sapiens]
gi|61361068|gb|AAX41984.1| high-mobility group 20A [synthetic construct]
gi|61361075|gb|AAX41985.1| high-mobility group 20A [synthetic construct]
gi|119619607|gb|EAW99201.1| high-mobility group 20A, isoform CRA_a [Homo sapiens]
gi|119619608|gb|EAW99202.1| high-mobility group 20A, isoform CRA_a [Homo sapiens]
gi|119619609|gb|EAW99203.1| high-mobility group 20A, isoform CRA_a [Homo sapiens]
gi|208966460|dbj|BAG73244.1| high-mobility group 20A protein [synthetic construct]
gi|355692904|gb|EHH27507.1| HMG box-containing protein 20A [Macaca mulatta]
gi|355778214|gb|EHH63250.1| HMG box-containing protein 20A [Macaca fascicularis]
gi|380784973|gb|AFE64362.1| high mobility group protein 20A [Macaca mulatta]
gi|383413847|gb|AFH30137.1| high mobility group protein 20A [Macaca mulatta]
gi|384942166|gb|AFI34688.1| high mobility group protein 20A [Macaca mulatta]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|426379912|ref|XP_004056631.1| PREDICTED: high mobility group protein 20A isoform 1 [Gorilla
gorilla gorilla]
gi|426379914|ref|XP_004056632.1| PREDICTED: high mobility group protein 20A isoform 2 [Gorilla
gorilla gorilla]
Length = 347
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 96 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 155
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 156 ADRDKERYMKELEQY 170
>gi|349604600|gb|AEQ00107.1| High mobility group protein B3-like protein, partial [Equus
caballus]
Length = 118
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 7 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKL 66
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 67 KEKYEKDVADY 77
>gi|346986304|ref|NP_001069753.2| high mobility group protein B3 isoform 1 [Bos taurus]
Length = 274
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 164 PNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKL 223
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 224 KEKYEKDVADY 234
>gi|547652|sp|P36194.2|HMGB1_CHICK RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|391636|dbj|BAA03260.1| HMG-1 [Gallus gallus]
Length = 201
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + + EK+ N+ AK
Sbjct: 89 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKL 148
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 149 KEKYEKDVADY 159
>gi|344303885|gb|EGW34134.1| hypothetical protein SPAPADRAFT_49202 [Spathaspora passalidarum
NRRL Y-27907]
Length = 237
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT YF FQ R +I + P++ I++ ++ E W I + EK+ +
Sbjct: 92 PNAPKKPLTMYFAFQFHTRKEIADERKKKGLPSLSAIDMNSIIKERWANISDKEKETWKQ 151
Query: 101 EYAKEKEIYAQNVKKYHDELT 121
+Y+ E ++Y +KY LT
Sbjct: 152 KYSDELKVYNVEKEKYQSGLT 172
>gi|149642767|ref|NP_001092586.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Bos taurus]
gi|148745040|gb|AAI42471.1| SMARCE1 protein [Bos taurus]
gi|296476367|tpg|DAA18482.1| TPA: SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin e1 [Bos taurus]
Length = 415
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|194206436|ref|XP_001490860.2| PREDICTED: high mobility group protein 20A [Equus caballus]
Length = 322
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 71 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 130
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + +++Y
Sbjct: 131 ADRDKERYMKELEQY 145
>gi|340504145|gb|EGR30621.1| nonhistone chromosomal protein lg, putative [Ichthyophthirius
multifiliis]
Length = 87
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 47/73 (64%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+PL+ +F F+ + K+ +++PN +I ++ +++E+WKK EK++ E +YA+
Sbjct: 1 PLPPKRPLSSFFLFKQENHEKVKKQHPNARITQLISMMAEQWKKASIQEKQKYEGQYAEA 60
Query: 106 KEIYAQNVKKYHD 118
K Y Q + +Y +
Sbjct: 61 KAKYEQELIEYQN 73
>gi|224098124|ref|XP_002198052.1| PREDICTED: high mobility group protein B3 isoform 1 [Taeniopygia
guttata]
gi|326924638|ref|XP_003208532.1| PREDICTED: high mobility group protein B3-like [Meleagris
gallopavo]
gi|449498655|ref|XP_004177286.1| PREDICTED: high mobility group protein B3 isoform 2 [Taeniopygia
guttata]
Length = 202
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + + EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|449269345|gb|EMC80131.1| High mobility group protein B3 [Columba livia]
Length = 202
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + + EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|283462216|gb|ADB22402.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 241
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PK+ L+P+F F R ++ + +PN + +V K + E+WK + A+K + E E AKE
Sbjct: 122 PDAPKRNLSPFFLFCNVKRAEVKKVHPNWGVGDVAKALGEQWKNVSAADKAKYEKEAAKE 181
Query: 106 KEIYAQNVKKY 116
K Y ++++ Y
Sbjct: 182 KIRYEKDMEAY 192
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKII--EVTKLVSEEWKKIGEAEKKRLENEYA 103
P+KPK ++ Y F R + +++P ++ E +K +E WKK+ + EKK +
Sbjct: 33 PDKPKGRMSAYAFFVQSCRQEHKKQHPAESVVFAEFSKKCAERWKKMTDKEKKVFHDMAD 92
Query: 104 KEKEIYAQNVKKY 116
K+KE Y ++KY
Sbjct: 93 KDKERYNTEMEKY 105
>gi|47225926|emb|CAF98406.1| unnamed protein product [Tetraodon nigroviridis]
Length = 863
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
P+ PK PLT Y +F R ++ P++ E+T+++ EW K+ EK+R +E
Sbjct: 38 PMKDSNAPKAPLTGYVRFMNDRREQLRAERPDVPFPEITRMLGNEWSKLPPEEKQRYLDE 97
Query: 102 YAKEKEIYAQNVKKY 116
++KE Y + ++KY
Sbjct: 98 AERDKERYMRELEKY 112
>gi|355694844|gb|AER99804.1| high-mobility group box 3 [Mustela putorius furo]
Length = 197
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + + EK+ N+ AK
Sbjct: 92 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKL 151
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 152 KEKYEKDVADY 162
>gi|392876654|gb|AFM87159.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F +R KI E P + I ++ K + E+W +G EK E + K
Sbjct: 108 PNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADKL 167
Query: 106 KEIYAQNVKKYHDELTPEAI 125
KE Y ++V Y + P+++
Sbjct: 168 KEKYKKDVAAYRAKTKPDSV 187
>gi|349802605|gb|AEQ16775.1| putative high mobility group box 3 [Pipa carvalhoi]
Length = 149
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + E EK+ N+ AK
Sbjct: 65 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNEGEKQPYNNKAAKL 124
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 125 KEKYEKDVADY 135
>gi|56384901|gb|AAV85889.1| high mobility group 1 protein [Pelodiscus sinensis]
Length = 202
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + + EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|440904264|gb|ELR54803.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1, partial [Bos grunniens
mutus]
Length = 415
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|148229870|ref|NP_001080585.1| high mobility group box 3 [Xenopus laevis]
gi|27882654|gb|AAH44009.1| Hmgb3-prov protein [Xenopus laevis]
Length = 202
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGITIGDVAKKLGEMWNNLSDSEKQPYNNKGAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|52345682|ref|NP_001004888.1| high mobility group box 3 [Xenopus (Silurana) tropicalis]
gi|49522962|gb|AAH75290.1| MGC88931 protein [Xenopus (Silurana) tropicalis]
gi|89267024|emb|CAJ81774.1| high-mobility group box 3 [Xenopus (Silurana) tropicalis]
Length = 202
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + + EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDGEKQPYNNKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|363755396|ref|XP_003647913.1| hypothetical protein Ecym_7252 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891949|gb|AET41096.1| hypothetical protein Ecym_7252 [Eremothecium cymbalariae
DBVPG#7215]
Length = 464
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 37/54 (68%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
PK+P P+ +F ++R K+++ NP+ +IE+TKLV E+W+ + EK++ + Y
Sbjct: 368 PKRPSGPFIQFTSELRPKLLKDNPDKSLIEITKLVGEQWRNLPSEEKQKYTDAY 421
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P + YF F IR +++ + P+ K+ E++KL S WK++ E +KK ++
Sbjct: 293 QGPKRPSSAYFLFSMSIREELLRQYPDAKVPELSKLSSARWKELSEEDKKPFYGQFKDNW 352
Query: 107 EIYAQNVKKYHDELTP 122
E Y K+Y L P
Sbjct: 353 EKYRIAKKEYEATLPP 368
>gi|301779135|ref|XP_002925003.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like
[Ailuropoda melanoleuca]
Length = 467
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 125 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 184
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 185 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 235
Query: 172 KEYE 175
+Y+
Sbjct: 236 DDYD 239
>gi|302309282|ref|XP_002999445.1| AGL073C-Ap [Ashbya gossypii ATCC 10895]
gi|299788284|gb|ADJ41738.1| AGL073C-Ap [Ashbya gossypii ATCC 10895]
gi|374109842|gb|AEY98747.1| FAGL073C-Ap [Ashbya gossypii FDAG1]
Length = 374
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 37/54 (68%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
PK+P P+ +F ++R K+++ NP+ +IE+TKLV E+W+ + EK++ + Y
Sbjct: 282 PKRPSGPFIQFTSEMRPKLLKDNPDKSLIEITKLVGEQWRSLPPEEKQKYTDAY 335
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 14 GNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEK-------PKKPLTPYFKFQGQIRNK 66
G + R P+ + A K+ ++ I ++ PK+P + YF F IR +
Sbjct: 167 GGAWGARRGARPYGGAAVAAAPKKMSTTQSRIEKRKRLKKQGPKRPSSAYFLFSMSIREE 226
Query: 67 IMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTP 122
++ + P+ K+ E++KL S WK++ E +KK ++ E Y K+Y L P
Sbjct: 227 LLRQYPDAKVPELSKLSSARWKELSEEDKKPFYEQFKDNWEKYRVARKEYEATLPP 282
>gi|452988900|gb|EME88655.1| hypothetical protein MYCFIDRAFT_57980 [Pseudocercospora fijiensis
CIRAD86]
Length = 108
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F + R+K+ + NP IK EV K++ E+WK +GE +K E + A +
Sbjct: 27 PNMPKRGLSAYMFFANEQRDKVRDENPGIKFGEVGKMLGEKWKALGEKQKAPYEAKAAAD 86
Query: 106 KEIYAQNVKKY 116
K+ Y + Y
Sbjct: 87 KKRYEEEKAAY 97
>gi|345309945|ref|XP_003428904.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily E
member 1-related-like [Ornithorhynchus anatinus]
Length = 395
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I +P++ E+TK++ EW K+ +K+R +E +
Sbjct: 25 LPNGPKAPVTGYVRFLNERREQIRMLHPDLPFPEITKMLGAEWSKLQPTDKQRYLDEAER 84
Query: 105 EKEIYAQNVKKYH 117
EK+ Y + +++Y
Sbjct: 85 EKQQYMKELREYQ 97
>gi|392879586|gb|AFM88625.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F +R KI E P + I ++ K + E+W +G EK E + K
Sbjct: 108 PNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADKL 167
Query: 106 KEIYAQNVKKYHDELTPEAI 125
KE Y ++V Y + P+++
Sbjct: 168 KEKYKKDVAAYRAKTKPDSV 187
>gi|334322983|ref|XP_001369760.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like
[Monodelphis domestica]
Length = 412
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|290987026|ref|XP_002676224.1| HMG1/2 box [Naegleria gruberi]
gi|284089825|gb|EFC43480.1| HMG1/2 box [Naegleria gruberi]
Length = 253
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
E K+P+T Y +F +IR ++++ NP K+ E+TKL ++ WK++ +KK + + +
Sbjct: 186 EANKRPMTSYMRFFMEIRPQLIQENPTAKVTEITKLAAQRWKELSATKKKVYQEAFEADM 245
Query: 107 EIY 109
E+Y
Sbjct: 246 EVY 248
>gi|158297853|ref|XP_318023.4| AGAP004791-PA [Anopheles gambiae str. PEST]
gi|158297857|ref|XP_001689081.1| AGAP004789-PA [Anopheles gambiae str. PEST]
gi|157014526|gb|EAA13138.4| AGAP004791-PA [Anopheles gambiae str. PEST]
gi|157014528|gb|EDO63498.1| AGAP004789-PA [Anopheles gambiae str. PEST]
Length = 324
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK PLT Y ++ + R + +++PN+ IEVTK+++EEW K+ E KK +KE
Sbjct: 74 PKHPLTGYVRYMNEHREGVRQKHPNLTPIEVTKIMAEEWSKLSEERKKPYLEAAEVDKER 133
Query: 109 YAQNVKKYHDELTPEA-IEFLRKEKEVKK 136
Y + + +Y +L EA + L+ E +V K
Sbjct: 134 YNKEISEY--KLNNEAKAKALQNESQVAK 160
>gi|395532484|ref|XP_003768300.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Sarcophilus
harrisii]
Length = 426
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|395826456|ref|XP_003786434.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 1
[Otolemur garnettii]
Length = 411
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|403304555|ref|XP_003942861.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 1
[Saimiri boliviensis boliviensis]
Length = 411
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|397522851|ref|XP_003831462.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 1
[Pan paniscus]
Length = 411
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|291406002|ref|XP_002719406.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin e1 [Oryctolagus cuniculus]
Length = 393
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 51 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 110
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 111 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 161
Query: 172 KEYE 175
+Y+
Sbjct: 162 DDYD 165
>gi|81673590|gb|AAI09794.1| High-mobility group box 3 [Bos taurus]
gi|296471156|tpg|DAA13271.1| TPA: high mobility group protein B3 isoform 1 [Bos taurus]
Length = 236
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 126 PNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKL 185
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 186 KEKYEKDVADY 196
>gi|327275491|ref|XP_003222507.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like [Anolis
carolinensis]
Length = 412
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|30585419|gb|AAP36982.1| Homo sapiens SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily e, member 1 [synthetic
construct]
gi|60653639|gb|AAX29513.1| SWI/SNF related matrix associated actin dependent regulator of
chromatin subfamily e, member 1 [synthetic construct]
gi|60653641|gb|AAX29514.1| SWI/SNF related matrix associated actin dependent regulator of
chromatin subfamily e, member 1 [synthetic construct]
Length = 412
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|392884154|gb|AFM90909.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F +R KI E P + I ++ K + E+W +G EK E + K
Sbjct: 108 PNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADKL 167
Query: 106 KEIYAQNVKKYHDELTPEAI 125
KE Y ++V Y + P+++
Sbjct: 168 KEKYKKDVAAYRAKTKPDSV 187
>gi|169793999|gb|ACA81396.1| Smarce1 variant 3 [Mus musculus]
Length = 136
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 34 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 93
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKP 154
++K YH+ +P + ++ + + +E+ ++ E G+P
Sbjct: 94 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP 134
>gi|392876858|gb|AFM87261.1| high mobility group protein [Callorhinchus milii]
gi|392878442|gb|AFM88053.1| high mobility group protein [Callorhinchus milii]
gi|392880194|gb|AFM88929.1| high mobility group protein [Callorhinchus milii]
gi|392881188|gb|AFM89426.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F +R KI E P + I ++ K + E+W +G EK E + K
Sbjct: 108 PNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADKL 167
Query: 106 KEIYAQNVKKYHDELTPEAI 125
KE Y ++V Y + P+++
Sbjct: 168 KEKYKKDVAAYRAKTKPDSV 187
>gi|55742128|ref|NP_001006760.1| high mobility group protein 20A [Xenopus (Silurana) tropicalis]
gi|82183397|sp|Q6DIJ5.1|HM20A_XENTR RecName: Full=High mobility group protein 20A; AltName: Full=HMG
box-containing protein 20A
gi|49523172|gb|AAH75543.1| high-mobility group 20A [Xenopus (Silurana) tropicalis]
Length = 345
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK PLT Y +F + R ++ P++ E+T++V EW K+ EK+ +E K+KE
Sbjct: 101 PKAPLTGYVRFMNERREQLRTERPDVPFPEITRIVGSEWSKLPAHEKQHYLDEAEKDKER 160
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKRE 143
Y + +++Y + T + RK + +K +++++E
Sbjct: 161 YTKELQQYQN--TDAYQTYSRKAQSRQKGRQQRQE 193
>gi|21264355|ref|NP_003070.3| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Homo sapiens]
gi|386782153|ref|NP_001248235.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Macaca mulatta]
gi|114667531|ref|XP_511478.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 7
[Pan troglodytes]
gi|332258461|ref|XP_003278319.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Nomascus
leucogenys]
gi|402900116|ref|XP_003913026.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Papio
anubis]
gi|61247587|sp|Q969G3.2|SMCE1_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1; AltName:
Full=BRG1-associated factor 57; Short=BAF57
gi|2914753|gb|AAC04509.1| BAF57 [Homo sapiens]
gi|39645807|gb|AAH63700.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Homo sapiens]
gi|119581074|gb|EAW60670.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1, isoform CRA_a [Homo
sapiens]
gi|119581075|gb|EAW60671.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1, isoform CRA_a [Homo
sapiens]
gi|193786044|dbj|BAG50933.1| unnamed protein product [Homo sapiens]
gi|193787772|dbj|BAG52975.1| unnamed protein product [Homo sapiens]
gi|380815820|gb|AFE79784.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Macaca mulatta]
gi|383420971|gb|AFH33699.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Macaca mulatta]
gi|384948944|gb|AFI38077.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Macaca mulatta]
gi|410227474|gb|JAA10956.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Pan troglodytes]
gi|410262366|gb|JAA19149.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Pan troglodytes]
gi|410302428|gb|JAA29814.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Pan troglodytes]
gi|410342573|gb|JAA40233.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Pan troglodytes]
Length = 411
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|387914724|gb|AFK10971.1| high mobility group box 1 [Callorhinchus milii]
Length = 226
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F +R KI E P + I ++ K + E+W +G EK E + K
Sbjct: 108 PNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADKL 167
Query: 106 KEIYAQNVKKYHDELTPEAI 125
KE Y ++V Y + P+++
Sbjct: 168 KEKYKKDVAAYRAKTKPDSV 187
>gi|403304561|ref|XP_003942864.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 4
[Saimiri boliviensis boliviensis]
Length = 393
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 51 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 110
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 111 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 161
Query: 172 KEYE 175
+Y+
Sbjct: 162 DDYD 165
>gi|296202790|ref|XP_002748612.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 2
[Callithrix jacchus]
Length = 411
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|19698568|gb|AAL93211.1|AF487782_1 Baf57 [Xenopus laevis]
Length = 423
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ + G+P Y+ I+ D
Sbjct: 129 SMKTYHN--SPAYLAYISAKSRAEAALEEESRQRQSRMDKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|449267621|gb|EMC78542.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1, partial [Columba livia]
Length = 406
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 64 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 123
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 124 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 174
Query: 172 KEYE 175
+Y+
Sbjct: 175 DDYD 178
>gi|426348397|ref|XP_004041823.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Gorilla
gorilla gorilla]
Length = 411
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|290986470|ref|XP_002675947.1| predicted protein [Naegleria gruberi]
gi|284089546|gb|EFC43203.1| predicted protein [Naegleria gruberi]
Length = 215
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+PL+ Y F R ++ NP +K+ EV KLV E+W K+ +AEK N+ A+ K
Sbjct: 120 PKRPLSSYMLFSQTYRKSLVAENPTLKVTEVAKLVGEKWGKMNDAEKAPYVNKAAELKAA 179
Query: 109 YAQNVKKYH 117
Y KY
Sbjct: 180 YNIEKSKYD 188
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKI---MERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
P PK+P T +F F + R K+ + EV+KL+ EEW K+ ++EK + +
Sbjct: 12 PNAPKRPKTGFFLFCDERREKVKATLGEGEKKSASEVSKLLGEEWGKLTDSEKDKYNSVS 71
Query: 103 AKEKEIYAQNVKKY 116
K E+Y + ++Y
Sbjct: 72 KKNMEVYKKQFEEY 85
>gi|403215177|emb|CCK69677.1| hypothetical protein KNAG_0C05790 [Kazachstania naganishii CBS
8797]
Length = 210
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 32/121 (26%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P+T Y + +IR + + NP++K E+TKL E+W ++ E +K +Y K
Sbjct: 65 QAPKRPMTAYLLYCKEIRPGMKKENPDLKTTELTKLFGEKWSELSEQARKPFVEQYEK-- 122
Query: 107 EIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIK 166
+F +KE K F +T PKKP F+LF K
Sbjct: 123 -------------------DFAEYQKE-----------KAAFEKTLPPKKPAAPFFLFTK 152
Query: 167 D 167
D
Sbjct: 153 D 153
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
PKKP P+F F +R+ +++ +P+ E++ LVS++W + E++K+ + Y K+
Sbjct: 140 PKKPAAPFFLFTKDVRSSVVDAHPDATFGEISTLVSQKWNSMEESKKEEYHDLYKKQ 196
>gi|449667750|ref|XP_004206636.1| PREDICTED: FACT complex subunit Ssrp1-like [Hydra magnipapillata]
Length = 220
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 51/85 (60%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
P+ PKKPL + ++ +IR+++ E+NP I ++TK++S +W + ++K+ +
Sbjct: 93 PIVTSSIPKKPLNAFIRYCQEIRDEVDEQNPGISRQDLTKVISYKWNAMSSSDKEIYFDL 152
Query: 102 YAKEKEIYAQNVKKYHDELTPEAIE 126
+ K+K+ Y + +K+Y ++ + E
Sbjct: 153 FDKDKQRYEEEMKQYTQQIAQQNTE 177
>gi|449490998|ref|XP_002194035.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Taeniopygia
guttata]
Length = 394
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 51 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 110
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 111 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 161
Query: 172 KEYE 175
+Y+
Sbjct: 162 DDYD 165
>gi|391338878|ref|XP_003743782.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like
[Metaseiulus occidentalis]
Length = 366
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 72/130 (55%), Gaps = 3/130 (2%)
Query: 30 VTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKK 89
V T Q S+ P+ P+KPL PY ++ ++ +++ +NP++K+ +V KL+ + WK+
Sbjct: 50 VGTRAATQVDSRVPKAPKPPEKPLMPYLRYSRKVWDQVKAQNPDMKLWDVGKLIGQMWKE 109
Query: 90 IGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFR 149
+ E K+ ++Y +EK Y +N+K YH +P ++ + ++ +E+ + +KL R
Sbjct: 110 LPEESKQVYIDDYEQEKAEYNENLKNYHS--SPAYQSYVANKVRAQQAAEEREQNEKLGR 167
Query: 150 ETGKPKKPGN 159
G K N
Sbjct: 168 -GGYSSKDAN 176
>gi|58267838|ref|XP_571075.1| nonhistone protein 6 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112343|ref|XP_775147.1| hypothetical protein CNBE4210 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257799|gb|EAL20500.1| hypothetical protein CNBE4210 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227309|gb|AAW43768.1| nonhistone protein 6, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 240
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
P PK+P + Y FQ ++R+ I NP + +V +++S+ WK++ ++EKK E+ YA
Sbjct: 91 PNAPKRPPSAYILFQNEVRDDIRTSNPGMPYKDVLQIISQRWKELPDSEKKIFEDAYAA 149
>gi|13937941|gb|AAH07082.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Homo sapiens]
gi|15029623|gb|AAH11017.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Homo sapiens]
gi|30583191|gb|AAP35840.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Homo sapiens]
gi|61361536|gb|AAX42063.1| SWI/SNF related matrix associated actin dependent regulator of
chromatin subfamily e member 1 [synthetic construct]
gi|61361541|gb|AAX42064.1| SWI/SNF related matrix associated actin dependent regulator of
chromatin subfamily e member 1 [synthetic construct]
gi|123979618|gb|ABM81638.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [synthetic construct]
gi|123993611|gb|ABM84407.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [synthetic construct]
gi|123994437|gb|ABM84820.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [synthetic construct]
gi|123999682|gb|ABM87381.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [synthetic construct]
gi|261861652|dbj|BAI47348.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [synthetic construct]
Length = 411
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|291231769|ref|XP_002735836.1| PREDICTED: high mobility group 20 B-like [Saccoglossus kowalevskii]
Length = 546
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK P T Y + + R K+ E NP + EVTKL+ +W + +K++ E +K+
Sbjct: 260 PKAPTTAYVLYLNEQRVKVKEENPEMAFTEVTKLLGSQWSSMSAEDKQKYVEEAENDKKR 319
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKK 136
Y +K Y EA + K + KK
Sbjct: 320 YIDELKAYQQT---EAYQAFLKRQAAKK 344
>gi|255083979|ref|XP_002508564.1| animal specific-mbd4, 5 and 6 [Micromonas sp. RCC299]
gi|226523841|gb|ACO69822.1| animal specific-mbd4, 5 and 6 [Micromonas sp. RCC299]
Length = 288
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
++ P KPK P Y F R KI NP++K E+ K++ E+WK + + E
Sbjct: 112 VTDPNKPKGPKGAYMCFVQIARPKINAANPDLKFAEIAKMLGEQWKNMDTTTRAGYEKMA 171
Query: 103 AKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKK 136
++KE Y + + Y ++ +E LRKEK KK
Sbjct: 172 EQDKERYQREIAAYV-PMSEAGLEQLRKEKAAKK 204
>gi|440910877|gb|ELR60625.1| High mobility group protein B3 [Bos grunniens mutus]
Length = 236
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 126 PNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKL 185
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 186 KEKYEKDVADY 196
>gi|147902244|ref|NP_001090402.1| high mobility group 20B [Xenopus laevis]
gi|114108329|gb|AAI23348.1| Hmg20b protein [Xenopus laevis]
Length = 319
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 44/72 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I ++P++ E+TK++ EW + EK+R +E +
Sbjct: 64 LPNGPKAPVTGYVRFLNERREQIRAQHPDLPFPEITKMLGAEWSTLPAHEKQRYLDEAER 123
Query: 105 EKEIYAQNVKKY 116
+K+ Y + +++Y
Sbjct: 124 DKQQYMKELREY 135
>gi|426237945|ref|XP_004012918.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 1
[Ovis aries]
Length = 411
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|426258242|ref|XP_004022724.1| PREDICTED: high mobility group protein B3 [Ovis aries]
Length = 248
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 161 PNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKL 220
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 221 KEKYEKDVADY 231
>gi|355754126|gb|EHH58091.1| BRG1-associated factor 57 [Macaca fascicularis]
Length = 393
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 51 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 110
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 111 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 161
Query: 172 KEYE 175
+Y+
Sbjct: 162 DDYD 165
>gi|350397805|ref|XP_003484997.1| PREDICTED: high mobility group protein 20A-like [Bombus impatiens]
Length = 328
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+PLT YF+F R K+ NP + E+TKL++ EW + +K++ + ++KE
Sbjct: 83 PKQPLTGYFRFLNDRREKVRTENPTLSFAEITKLLASEWSTLPADQKQQYLDAAEQDKER 142
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKK 146
Y +++ D EA +KQ EK+E KK
Sbjct: 143 YN---REFSDYKQTEAYRLF-----SEKQSSEKQENKK 172
>gi|73965989|ref|XP_851010.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 2
[Canis lupus familiaris]
Length = 411
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|354507946|ref|XP_003516015.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like,
partial [Cricetulus griseus]
Length = 128
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 17 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 76
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKP 154
++K YH+ +P + ++ + + +E+ ++ E G+P
Sbjct: 77 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP 117
>gi|395826462|ref|XP_003786437.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 4
[Otolemur garnettii]
Length = 393
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 51 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 110
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 111 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 161
Query: 172 KEYE 175
+Y+
Sbjct: 162 DDYD 165
>gi|345805404|ref|XP_862912.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 4
[Canis lupus familiaris]
Length = 393
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 51 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 110
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 111 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 161
Query: 172 KEYE 175
+Y+
Sbjct: 162 DDYD 165
>gi|296202788|ref|XP_002748611.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 1
[Callithrix jacchus]
Length = 393
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 51 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 110
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 111 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 161
Query: 172 KEYE 175
+Y+
Sbjct: 162 DDYD 165
>gi|149054160|gb|EDM05977.1| rCG34563, isoform CRA_e [Rattus norvegicus]
Length = 186
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 55 PYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVK 114
PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +++K
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 115 KYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDKKEY 174
YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D +Y
Sbjct: 62 AYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDPDDY 112
Query: 175 E 175
+
Sbjct: 113 D 113
>gi|197102747|ref|NP_001127230.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Pongo abelii]
gi|55726577|emb|CAH90055.1| hypothetical protein [Pongo abelii]
gi|194378168|dbj|BAG57834.1| unnamed protein product [Homo sapiens]
Length = 393
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 51 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 110
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 111 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 161
Query: 172 KEYE 175
+Y+
Sbjct: 162 DDYD 165
>gi|351698715|gb|EHB01634.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1, partial [Heterocephalus
glaber]
Length = 411
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|148230056|ref|NP_001079374.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Xenopus laevis]
gi|54038158|gb|AAH84249.1| Smarce1 protein [Xenopus laevis]
Length = 423
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ + G+P Y+ I+ D
Sbjct: 129 SMKTYHN--SPAYLAYISAKSRAEAALEEESRQRQSRMDKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|427788721|gb|JAA59812.1| Putative nucleolar transcription factor 1 [Rhipicephalus
pulchellus]
Length = 847
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PKKPLTPYF+F + R K NP + + E+ KL+S +++++ E +K++ + + ++
Sbjct: 156 PGLPKKPLTPYFRFFLEKREKYSRENPELSMTELAKLISNKFQELPEKKKQKYKESFERD 215
Query: 106 KEIYAQNVKKYHDELTPEAI 125
+IY +KK+ E P+A
Sbjct: 216 NDIYKVELKKFKKE-NPDAF 234
>gi|427778831|gb|JAA54867.1| Putative nucleolar transcription factor 1 [Rhipicephalus
pulchellus]
Length = 937
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PKKPLTPYF+F + R K NP + + E+ KL+S +++++ E +K++ + + ++
Sbjct: 156 PGLPKKPLTPYFRFFLEKREKYSRENPELSMTELAKLISNKFQELPEKKKQKYKESFERD 215
Query: 106 KEIYAQNVKKYHDELTPEAI 125
+IY +KK+ E P+A
Sbjct: 216 NDIYKVELKKFKKE-NPDAF 234
>gi|410981045|ref|XP_003996883.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Felis
catus]
Length = 411
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|306518680|ref|NP_001006335.2| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Gallus gallus]
gi|326934129|ref|XP_003213147.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like [Meleagris
gallopavo]
Length = 412
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|53129001|emb|CAG31353.1| hypothetical protein RCJMB04_5f21 [Gallus gallus]
Length = 412
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|296317265|ref|NP_001171733.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 215
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PK+ L+P+F F R ++ + +PN + +V K + E+WK + A+K + E E AKE
Sbjct: 96 PDAPKRNLSPFFLFCNVKRAEVKKVHPNWGVGDVAKALGEQWKNVSAADKAKYEKEAAKE 155
Query: 106 KEIYAQNVKKY 116
K Y ++++ Y
Sbjct: 156 KIRYEKDMEAY 166
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKII--EVTKLVSEEWKKIGEAEKKRLENEYA 103
P+KPK ++ Y F R + +++P ++ E +K +E WKK+ + EKK +
Sbjct: 7 PDKPKGRMSAYAFFVQSCRQEHKKQHPAESVVFAEFSKKCAERWKKMTDKEKKVFHDMAD 66
Query: 104 KEKEIYAQNVKKY 116
K+KE Y ++KY
Sbjct: 67 KDKERYNTEMEKY 79
>gi|169794009|gb|ACA81401.1| Smarce1 variant 3 [Rattus norvegicus]
Length = 142
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 34 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 93
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKP 154
++K YH+ +P + ++ + + +E+ ++ E G+P
Sbjct: 94 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP 134
>gi|17942547|pdb|1K99|A Chain A, Solution Structure Of The First Hmg Box In Human Upstream
Binding Factor
Length = 99
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 8 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 67
Query: 106 KEIYAQNVKKYHDELTPEAIE 126
K+ + +N+ ++ ++ P+ I+
Sbjct: 68 KQEFERNLARFRED-HPDLIQ 87
>gi|338711933|ref|XP_003362620.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Equus
caballus]
Length = 376
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 34 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 93
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 94 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 144
Query: 172 KEYE 175
+Y+
Sbjct: 145 DDYD 148
>gi|387014382|gb|AFJ49310.1| WI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1-like [Crotalus
adamanteus]
Length = 412
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|111309249|gb|AAI21725.1| Ubtf protein [Danio rerio]
Length = 347
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ + +K++ ++ +E
Sbjct: 101 PDFPKKPLTPYFRFLMEKRAKYAKLHPEMSNLDLTKILSKKYKELPDRKKEKYVKDFLRE 160
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEV 134
KE + ++ K+ E P+ +E + K+ V
Sbjct: 161 KETFMLSMMKFKQE-HPDLLENVNKKSNV 188
>gi|120974310|gb|ABM46670.1| HMG20A [Gorilla gorilla]
Length = 115
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
PL PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E
Sbjct: 17 PLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDE 76
Query: 102 YAKEKEIYAQNVKKYH 117
++KE Y + +++Y
Sbjct: 77 ADRDKERYMKELEQYQ 92
>gi|47223974|emb|CAG06151.1| unnamed protein product [Tetraodon nigroviridis]
Length = 448
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ N+Y EK Y +
Sbjct: 68 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDDEKQDYLNDYEAEKIEYNE 127
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ + G+P Y+ I+ D
Sbjct: 128 SMKAYHN--SPAYLAYVNAKSRAEAALEEESRQRQSRLDKGEP-------YMSIQPAEDP 178
Query: 172 KEYE 175
+Y+
Sbjct: 179 DDYD 182
>gi|198437156|ref|XP_002120971.1| PREDICTED: similar to SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily e, member 1
[Ciona intestinalis]
Length = 425
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ P+KPL Y ++ ++ +++ P++K+ E+ K++ + W+++ A+K+ EY E
Sbjct: 69 PKAPEKPLMAYMRYSRKVWDEVKANQPDLKLWEIGKIIGKMWRELPSADKQVYNAEYESE 128
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKK 146
K Y + +K YH+ +P +L+ + + + E R M++
Sbjct: 129 KGEYQELLKSYHN--SPAYQSYLQAKGRAEAFEAESRAMER 167
>gi|10181166|ref|NP_065643.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Mus musculus]
gi|55977468|sp|O54941.1|SMCE1_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1; AltName:
Full=BRG1-associated factor 57; Short=BAF57
gi|2914755|gb|AAC04510.1| BAF57 [Mus musculus]
gi|28502972|gb|AAH47141.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Mus musculus]
gi|38181916|gb|AAH61498.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Mus musculus]
gi|40787818|gb|AAH65043.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Mus musculus]
gi|148684236|gb|EDL16183.1| mCG15366, isoform CRA_c [Mus musculus]
Length = 411
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|403213858|emb|CCK68360.1| hypothetical protein KNAG_0A07060 [Kazachstania naganishii CBS
8797]
Length = 643
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P + YF F IRN ++++ P+ K+ E++KL S WK++ + +KK +E+
Sbjct: 377 QGPKRPSSAYFLFSMSIRNDLLQQYPDAKVPELSKLASARWKELTDDQKKPFYDEFRTNW 436
Query: 107 EIYAQNVKKYHDELTPE--AIEFLRKEKEVK----KQKKEKR--EMKKLFRETGKPKKP 157
+ Y +Y + L P+ + F++ +E++ K+ EK E+ KL E + P
Sbjct: 437 DKYRVLRDEYENTLPPKRPSGPFIQFTQEIRPTIVKENPEKNLIEITKLIGERWRSLDP 495
Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
PK+P P+ +F +IR I++ NP +IE+TKL+ E W+ + EK R + Y
Sbjct: 452 PKRPSGPFIQFTQEIRPTIVKENPEKNLIEITKLIGERWRSLDPVEKTRYTDTY 505
>gi|53749690|ref|NP_001005436.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Xenopus (Silurana)
tropicalis]
gi|49257937|gb|AAH74534.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Xenopus (Silurana)
tropicalis]
gi|89266950|emb|CAJ81375.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Xenopus (Silurana)
tropicalis]
gi|89268721|emb|CAJ82380.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Xenopus (Silurana)
tropicalis]
Length = 435
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ + G+P Y+ I+ D
Sbjct: 129 SMKTYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMDKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|149054157|gb|EDM05974.1| rCG34563, isoform CRA_b [Rattus norvegicus]
Length = 411
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|308812243|ref|XP_003083429.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116055309|emb|CAL57705.1| WD40 repeat-containing protein (ISS), partial [Ostreococcus tauri]
Length = 1235
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+ ++ Y F + R ++ +++PN + ++TK ++ +WK + +AE+ + ++KE
Sbjct: 26 PKRAMSAYLVFLNRHRERVQKKSPNASVTDITKELALKWKTVSDAERAECQRVSDQDKER 85
Query: 109 YAQNVKKY---HDELTPEAIEFLRKEKEVKKQKKEKREMKK 146
Y + ++ Y DE E K+ K++KK+K +K
Sbjct: 86 YYREMRDYVPLPDEKEDEPAPRYDKDGNRKRRKKDKAAPRK 126
>gi|348509013|ref|XP_003442046.1| PREDICTED: nucleolar transcription factor 1-like [Oreochromis
niloticus]
Length = 740
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S++++++ + +KK+ +++ ++
Sbjct: 101 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYRELPDKKKKKYVDDFLRD 160
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
KE + Q++ K+ +E P+ +E + K
Sbjct: 161 KETFVQSMMKFREE-HPDLVESMAK 184
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 30 VTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKK 89
+ K++ S+ + PEKPK+P++ F F + R K+ + P + E+T+L++ W +
Sbjct: 381 ANSPASKKKNSKANANPEKPKRPISAMFIFAEEKRPKLQQERPELADSEITRLLARMWNE 440
Query: 90 IGEAEK---KRLEN 100
+ + +K KRLE+
Sbjct: 441 LPDKKKEKFKRLES 454
>gi|27371255|gb|AAH41216.1| Smarce1 protein [Xenopus laevis]
Length = 402
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 51 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 110
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ + G+P Y+ I+ D
Sbjct: 111 SMKTYHN--SPAYLAYISAKSRAEAALEEESRQRQSRMDKGEP-------YMSIQPAEDP 161
Query: 172 KEYE 175
+Y+
Sbjct: 162 DDYD 165
>gi|71142469|emb|CAH60727.1| transcription factor A [Pan paniscus]
gi|71142471|emb|CAH60728.1| transcription factor A [Pan troglodytes]
gi|71142477|emb|CAH60731.1| transcription factor A [Papio anubis]
Length = 160
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 58/96 (60%)
Query: 70 RNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLR 129
+NP+ K E+ + +++ W+++ +++KK ++ Y E ++Y + + ++ ++LTP I L
Sbjct: 9 QNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLE 68
Query: 130 KEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
KE K K++ KK GKPK+P +++ +++
Sbjct: 69 KEIMDKHLKRKAMTKKKELTLLGKPKRPRSAYNVYV 104
>gi|238586980|ref|XP_002391336.1| hypothetical protein MPER_09251 [Moniliophthora perniciosa FA553]
gi|215455859|gb|EEB92266.1| hypothetical protein MPER_09251 [Moniliophthora perniciosa FA553]
Length = 269
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKR-------L 98
P PK+P + Y +Q ++R I E++PN+ E+ L+S+EW K+ E EK+
Sbjct: 75 PNAPKRPASSYIIYQNEVRQTIKEQHPNLSPAEIRTLISQEWAKMSEEEKEYYRKNAQIA 134
Query: 99 ENEYAKEKEIYA 110
+++Y EK YA
Sbjct: 135 KDKYTAEKAAYA 146
>gi|281344615|gb|EFB20199.1| hypothetical protein PANDA_014411 [Ailuropoda melanoleuca]
Length = 394
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 52 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 111
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 112 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 162
Query: 172 KEYE 175
+Y+
Sbjct: 163 DDYD 166
>gi|164450473|ref|NP_001106728.1| high mobility group protein B3 isoform 2 [Bos taurus]
gi|146324910|sp|Q32L31.2|HMGB3_BOVIN RecName: Full=High mobility group protein B3
gi|296471157|tpg|DAA13272.1| TPA: high mobility group protein B3 isoform 2 [Bos taurus]
gi|399227521|gb|AFP36466.1| HMGB3 transcript variant 1/2 [Bos taurus]
gi|399227522|gb|AFP36467.1| HMGB3 transcript variant 3 [Bos taurus]
Length = 200
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|431838509|gb|ELK00441.1| Putative upstream-binding factor 1-like protein 3/5 [Pteropus
alecto]
Length = 475
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 16/144 (11%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKP+T YF+F + R + +++P + E+TK++SEE+KK+ E K + ++ KE
Sbjct: 161 PDLPKKPMTAYFRFFKEKRPQYAQKHPGLNNKELTKVLSEEYKKLPEQVKLKYIQDFQKE 220
Query: 106 KEIY----AQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRET---------- 151
K+ + AQ KK+ D + + + + QKK +R ++++ T
Sbjct: 221 KQEFEEKLAQFRKKHPDLVQNSKNSVVPMRRPTRAQKKFQRNVREVKSPTESYFSMRMKF 280
Query: 152 -GKPKKPG-NSFYLFIKDNIDKKE 173
G+P+KP N ++ F +D + +E
Sbjct: 281 NGEPRKPPMNEYHKFQQDLWESRE 304
>gi|118344004|ref|NP_001071827.1| FACT complex subunit SSRP1 [Ciona intestinalis]
gi|110287972|sp|Q4H2R2.1|SSRP1_CIOIN RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Structure-specific recognition protein 1
gi|70571284|dbj|BAE06715.1| transcription factor protein [Ciona intestinalis]
Length = 704
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + YF + + R + N I + E+TKL +EWKKI EK++ E Y K
Sbjct: 551 PNAPKRPQSAYFLWLNENRGRFKAENKGISVTELTKLAGKEWKKIDPDEKQKFERMYQKS 610
Query: 106 KEIYAQNVKKY 116
K + +K+Y
Sbjct: 611 KVKFDAAMKEY 621
>gi|45360537|ref|NP_988941.1| high mobility group 20B [Xenopus (Silurana) tropicalis]
gi|38174731|gb|AAH61376.1| high-mobility group 20A [Xenopus (Silurana) tropicalis]
gi|89268220|emb|CAJ83818.1| high-mobility group 20A [Xenopus (Silurana) tropicalis]
Length = 319
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 44/72 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I ++P++ E+TK++ EW + EK+R +E +
Sbjct: 64 LPNGPKAPVTGYVRFLNERREQIRAQHPDLPFPEITKMLGAEWSTLPPHEKQRYLDEAER 123
Query: 105 EKEIYAQNVKKY 116
+K+ Y + +++Y
Sbjct: 124 DKQQYMKELREY 135
>gi|358342129|dbj|GAA49667.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Clonorchis sinensis]
Length = 1000
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 55 PYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVK 114
PY ++ ++ ++ NP++K+ EV K++ + W+++ + EK EY EK Y + ++
Sbjct: 2 PYMRYSRKVWEQVKNSNPHLKLWEVGKIIGQMWRELPDDEKNMYVEEYDAEKTQYTEALR 61
Query: 115 KYHDELTPEAIEFLRKEKEVKKQKKEKREMKK 146
+YH +A L KE+ K +++ +E K+
Sbjct: 62 QYHSSPAYQAW-LLAKERAEKLSEEQDQERKQ 92
>gi|254826706|ref|NP_001157151.1| high mobility group protein B3 [Monodelphis domestica]
gi|253756818|gb|ACT35166.1| HmgB3x [Monodelphis domestica]
Length = 201
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + + EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|76559898|ref|NP_958455.2| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Danio rerio]
gi|42542933|gb|AAH66435.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Danio rerio]
gi|76496509|gb|AAH44363.2| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Danio rerio]
gi|182891542|gb|AAI64725.1| Smarce1 protein [Danio rerio]
Length = 420
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y
Sbjct: 67 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNEYEAEKIEYND 126
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ + G+P Y+ I+ D
Sbjct: 127 SLKAYHN--SPAYLAYVNAKNRAEAALEEESRQRQSRLDKGEP-------YMSIQPAEDP 177
Query: 172 KEYE 175
+Y+
Sbjct: 178 DDYD 181
>gi|384499401|gb|EIE89892.1| hypothetical protein RO3G_14603 [Rhizopus delemar RA 99-880]
Length = 352
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 17 FNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKI 76
F L P L+ T A K+ + P+ + +P Y F ++R + +++P + +
Sbjct: 66 FPLIRLTQPQLHQPTLATNKEDANAPIRV----TRPPNAYLLFNKKMRRVLKDQDPTMNV 121
Query: 77 IEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKK 136
E++K ++E W+K+ + EK+ NE A +K+ L P ++ R E+K+
Sbjct: 122 GEISKQIAERWRKMSKEEKEMYVNE--------ANRLKQEQRALHPNSMYIRRSRAELKE 173
Query: 137 ----------QKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
KK R +KK + G PK P +++ ++ +
Sbjct: 174 AGKMIKEEPSDKKTARRVKKKIKSPGIPKHPLSAYMWYLTE 214
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK PL+ Y + ++R K M+ P+ + +++K +E+W + + E+ + + +
Sbjct: 198 PGIPKHPLSAYMWYLTEVRPKTMKSFPSSNVGQISKYCAEKWHTMTDEERAPWKTKAQVD 257
Query: 106 KEIYAQNVKKY 116
KE YA+ ++ Y
Sbjct: 258 KERYAREMQLY 268
>gi|344299188|ref|XP_003421269.1| PREDICTED: high mobility group protein B3-like [Loxodonta africana]
Length = 200
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + + EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|311277128|ref|XP_003135516.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 202
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|148233115|ref|NP_001083698.1| uncharacterized protein LOC399067 [Xenopus laevis]
gi|39645609|gb|AAH63718.1| MGC68625 protein [Xenopus laevis]
Length = 272
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 44/72 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P PK P+T Y +F + R +I ++P++ E+TK++ EW + EK+R +E +
Sbjct: 64 LPNGPKAPVTGYVRFLNERREQIRAQHPDLPFPEITKMLGAEWSTLPPHEKQRYLDEAER 123
Query: 105 EKEIYAQNVKKY 116
+K+ Y + +++Y
Sbjct: 124 DKQQYMKELREY 135
>gi|365991581|ref|XP_003672619.1| hypothetical protein NDAI_0K01850 [Naumovozyma dairenensis CBS 421]
gi|343771395|emb|CCD27376.1| hypothetical protein NDAI_0K01850 [Naumovozyma dairenensis CBS 421]
Length = 631
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P + YF F IRN ++++ P+ K+ E++KL S WK++ + EKK +E+
Sbjct: 382 QGPKRPSSAYFLFSMSIRNTLLQQFPDAKVPELSKLASARWKELTDVEKKPYYDEFRTNW 441
Query: 107 EIYAQNVKKYHDELTPE--AIEFLRKEKEVKKQ 137
+ Y +Y L P+ + F++ +E++ Q
Sbjct: 442 DKYRILRDEYEKTLPPKRPSGPFIQFTQEIRPQ 474
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
PK+P P+ +F +IR +I++ NP+ +IE+TK++ E+W+++ +K Y K
Sbjct: 457 PKRPSGPFIQFTQEIRPQIVKENPDKNLIEITKIIGEKWRELDPTKKAEYTETYKK 512
>gi|431890659|gb|ELK01538.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Pteropus alecto]
Length = 690
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 348 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 407
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 408 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 458
Query: 172 KEYE 175
+Y+
Sbjct: 459 DDYD 462
>gi|148235321|ref|NP_001089163.1| high mobility group box 3 [Xenopus laevis]
gi|55824420|gb|AAV66347.1| high mobility group B3b protein [Xenopus laevis]
gi|114108280|gb|AAI23148.1| LOC734200 protein [Xenopus laevis]
Length = 201
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I ++ K + E W + + EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDIAKKLGEMWNNLSDGEKQPYNNKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 25/122 (20%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKI--IEVTKLVSEEWKKIGEAEKKRLENEYA 103
P+KPK ++ Y F R + ++NP I + E +K SE W+ + EK + E+
Sbjct: 6 PKKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWRSMSGKEKSKFEDLAK 65
Query: 104 KEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYL 163
+K Y + +K + VKK K+ K + PK+P + F+L
Sbjct: 66 ADKVRYDREMKDFG---------------PVKKGKRNK--------DPNAPKRPPSGFFL 102
Query: 164 FI 165
F
Sbjct: 103 FC 104
>gi|253756810|gb|ACT35162.1| HmgB3y, partial [Monodelphis domestica]
Length = 193
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + + EK+ N+ AK
Sbjct: 87 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAKL 146
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 147 KEKYEKDVADY 157
>gi|59862113|gb|AAH90308.1| Ubtf protein, partial [Danio rerio]
Length = 349
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ + +K++ ++ +E
Sbjct: 101 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPDRKKEKYVKDFLRE 160
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEV 134
KE + ++ K+ E P+ +E + K+ V
Sbjct: 161 KETFMLSMMKFKQE-HPDLLENVNKKSNV 188
>gi|366987315|ref|XP_003673424.1| hypothetical protein NCAS_0A04790 [Naumovozyma castellii CBS 4309]
gi|342299287|emb|CCC67037.1| hypothetical protein NCAS_0A04790 [Naumovozyma castellii CBS 4309]
Length = 555
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P + YF F IRN+++E+ P+ K+ E++KL S WK++ + EKK E+ E
Sbjct: 343 PKRPSSAYFLFSMSIRNELLEQFPDAKVPELSKLASARWKELTDDEKKPFYEEFRTNWEK 402
Query: 109 YAQNVKKYHDELTP 122
Y +Y L P
Sbjct: 403 YRLLRDEYEKTLPP 416
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P P+ +F +IR I++ NP+ +IE+TK++ E+W+++ + EKK A E
Sbjct: 416 PKRPSGPFIQFTQEIRPTIVKENPDKNLIEITKIIGEKWREL-DPEKK------AAYTET 468
Query: 109 YAQNVKKY 116
Y + +K++
Sbjct: 469 YKRRLKEW 476
>gi|350588033|ref|XP_003482539.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
gi|350588037|ref|XP_003482541.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 196
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|77748442|gb|AAI07607.1| Ubtf protein, partial [Danio rerio]
Length = 347
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ + +K++ ++ +E
Sbjct: 101 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPDRKKEKYVKDFLRE 160
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEV 134
KE + ++ K+ E P+ +E + K+ V
Sbjct: 161 KETFMLSMMKFKQE-HPDLLENVNKKSNV 188
>gi|47216269|emb|CAG05965.1| unnamed protein product [Tetraodon nigroviridis]
Length = 486
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 65/127 (51%), Gaps = 13/127 (10%)
Query: 53 LTPYFKFQGQIRNKIMER----NPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
L PY ++ ++ K+ ++ NP++K+ E+ K++ W+ + + EK+ NEY EK
Sbjct: 68 LMPYMRYSRKVSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLSDEEKQDYLNEYEAEKIE 127
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y ++K YH+ +P + ++ + + +E+ ++ + G+P Y+ I+
Sbjct: 128 YNDSLKAYHN--SPAYLAYVNAKNRAEAAMEEESRQRQSRMDKGEP-------YMSIQPA 178
Query: 169 IDKKEYE 175
D +Y+
Sbjct: 179 EDPDDYD 185
>gi|120537680|gb|AAI29253.1| Ubtf protein [Danio rerio]
Length = 347
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ + +K++ ++ +E
Sbjct: 101 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPDRKKEKYVKDFLRE 160
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEV 134
KE + ++ K+ E P+ +E + K+ V
Sbjct: 161 KETFMLSMMKFKQE-HPDLLENVNKKSNV 188
>gi|453083241|gb|EMF11287.1| HMG_box-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 109
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F R+K+ E NP IK EV KL+ E WK + E +K E + A +
Sbjct: 27 PNMPKRGLSAYMFFANDTRDKVREDNPGIKFGEVGKLLGERWKALNEKQKAPYEAKAAAD 86
Query: 106 KEIYAQNVKKY 116
K+ Y + Y
Sbjct: 87 KKRYEEEKAAY 97
>gi|444714024|gb|ELW54912.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1 [Tupaia chinensis]
Length = 415
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 51 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 110
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 111 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 161
Query: 172 KEYE 175
+Y+
Sbjct: 162 DDYD 165
>gi|92097671|gb|AAI15119.1| Ubtf protein [Danio rerio]
gi|148744661|gb|AAI42748.1| Ubtf protein [Danio rerio]
Length = 391
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ + +K++ ++ +E
Sbjct: 101 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPDRKKEKYVKDFLRE 160
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEV 134
KE + ++ K+ E P+ +E + K+ V
Sbjct: 161 KETFMLSMMKFKQE-HPDLLENVNKKSNV 188
>gi|428184143|gb|EKX52999.1| hypothetical protein GUITHDRAFT_161135 [Guillardia theta CCMP2712]
Length = 268
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 39/58 (67%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+ PK+ L+ Y + ++R I+++NP +K+ E++K++ ++WK + KK+ ENE AK
Sbjct: 70 QAPKRALSAYMLYANEVRADIVKKNPEMKMTEISKVIGDKWKVLSADGKKKFENEAAK 127
>gi|66472650|ref|NP_001018387.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1-related isoform 1 [Danio
rerio]
gi|63102360|gb|AAH95120.1| High-mobility group 20B [Danio rerio]
gi|94733001|emb|CAK10914.1| novel HMG (high mobility group) box domain containing protein
[Danio rerio]
gi|134025299|gb|AAI34980.1| High-mobility group 20B [Danio rerio]
gi|182891194|gb|AAI64068.1| Hmg20b protein [Danio rerio]
Length = 301
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 37 QQTSQPLS-------------IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLV 83
Q TSQP+ +P PK P+T Y +F + R I +P++ E+TK +
Sbjct: 28 QSTSQPVKKRGWPKGKKRKKVLPNGPKAPVTGYVRFLNERREHIRALHPDLPFPEITKRL 87
Query: 84 SEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKY 116
EW ++ +K+R +E ++K YA+ +++Y
Sbjct: 88 GAEWSRLAPHDKQRYLDEAERDKMQYARELREY 120
>gi|113680218|ref|NP_001038693.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1-related isoform 2 [Danio
rerio]
Length = 298
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 37 QQTSQPLS-------------IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLV 83
Q TSQP+ +P PK P+T Y +F + R I +P++ E+TK +
Sbjct: 28 QSTSQPVKKRGWPKGKKRKKVLPNGPKAPVTGYVRFLNERREHIRALHPDLPFPEITKRL 87
Query: 84 SEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKY 116
EW ++ +K+R +E ++K YA+ +++Y
Sbjct: 88 GAEWSRLAPHDKQRYLDEAERDKMQYARELREY 120
>gi|355727527|gb|AES09227.1| upstream binding transcription factor, RNA polymerase I [Mustela
putorius furo]
Length = 219
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
>gi|50292849|ref|XP_448857.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528170|emb|CAG61827.1| unnamed protein product [Candida glabrata]
Length = 503
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 57/95 (60%), Gaps = 8/95 (8%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P P+ +F +IR +++ NP+ +IE+TK++ +W+ + A+K NEY E+
Sbjct: 379 PKRPSGPFIQFTQEIRPIVVKENPDKNLIEITKIIGSKWRDLDPAKK----NEYT---EM 431
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKRE 143
Y + +K++ +E PE + + KK +K+K++
Sbjct: 432 YKKRLKEW-EECYPEEAAAHEQSTQTKKGRKKKQD 465
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P + YF F IRN+++++ P+ K+ E++KL S W+++ + EKK +E+ E
Sbjct: 306 PKRPSSAYFLFSMSIRNELLQQFPDAKVPELSKLASARWRELSDDEKKPYYDEFRTNWEK 365
Query: 109 Y 109
Y
Sbjct: 366 Y 366
>gi|410917438|ref|XP_003972193.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like
[Takifugu rubripes]
Length = 426
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ N+Y EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNDYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ + G+P Y+ I+ D
Sbjct: 129 SMKAYHN--SPAYLAYVNAKSRAEAALEEESRQRQSRLDKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|410256408|gb|JAA16171.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F +IR KI NP I + +V K + E W + ++EK+ + AK
Sbjct: 90 PSAPKRPPSGFFLFSSEIRPKIKSTNPGISVGDVAKKLGEMWNNLNDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|186701221|gb|ACC91248.1| high mobility group HMG1/2 family protein [Arabidopsis halleri]
Length = 456
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKKP + YF F R +++E P VT L+S +WK++GE EK+ + AK
Sbjct: 376 PNKPKKPASSYFLFSKDERKRLIEERPGTNNSTVTALISVKWKELGEEEKQVYNKKAAKL 435
Query: 106 KEIYAQNVKKYH 117
E Y + V+ Y+
Sbjct: 436 MEAYKKEVEAYN 447
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 23/143 (16%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK P++ + + + R + R + ++EV K+ EEWK + + +K E K
Sbjct: 252 PLKPKHPVSAFLVYANERRAAL--REDSKSVVEVAKITGEEWKNLSDKKKAPYEEVAKKN 309
Query: 106 KEIYAQNVKKY-----HDELT-------------PEAIEFLRKEKEVKKQKKEKREMKKL 147
KE Y Q +++Y + L+ EA++ L+K+++ K+++ KK
Sbjct: 310 KETYLQAMEEYKRTKEEEALSQKKEEEELLKLHKQEALQLLKKKEKTDNLIKKEKATKKK 369
Query: 148 FRET---GKPKKPGNSFYLFIKD 167
E KPKKP +S++LF KD
Sbjct: 370 KNENIDPNKPKKPASSYFLFSKD 392
>gi|407926962|gb|EKG19868.1| High mobility group HMG1/HMG2 [Macrophomina phaseolina MS6]
Length = 106
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F +R+K+ E NP IK EV K++ E WK + E ++ E + A +
Sbjct: 24 PNAPKRGLSAYMFFANDMRDKVREENPGIKFGEVGKILGERWKALSEKQRAPYEAKAAND 83
Query: 106 KEIYAQNVKKYH 117
K+ Y Y+
Sbjct: 84 KKRYEDEKAAYN 95
>gi|359062996|ref|XP_003585778.1| PREDICTED: high mobility group protein B3-like, partial [Bos
taurus]
Length = 186
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|398406589|ref|XP_003854760.1| HMGB family protein [Zymoseptoria tritici IPO323]
gi|339474644|gb|EGP89736.1| HMGB family protein [Zymoseptoria tritici IPO323]
Length = 111
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F + R+ + E NP IK EV KL+ E WK + E +K E + A +
Sbjct: 26 PNMPKRGLSAYMFFANEQRDNVREENPGIKFGEVGKLLGERWKGLNEKQKTPYEAKAAAD 85
Query: 106 KEIYAQNVKKYHDELT 121
K+ Y + K Y +E +
Sbjct: 86 KKRYEEEKKAYLNEQS 101
>gi|449676214|ref|XP_002161760.2| PREDICTED: uncharacterized protein LOC100204080 [Hydra
magnipapillata]
Length = 325
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 13/138 (9%)
Query: 36 KQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK 95
KQ+ + L PK PLT Y ++ + R K NP++ EVTK++ ++W + ++EK
Sbjct: 40 KQKRKRILKDVNAPKAPLTGYVRYLNEHREKFRIENPDMPFHEVTKILGQKWSSLDQSEK 99
Query: 96 KRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPK 155
++ E K+KE Y + ++ Y ++ K+ +K+KR+ +TGK K
Sbjct: 100 QQYLYEAEKDKEKYMKALQGY------------QQSSAYKEFQKKKRQEADFLNDTGKVK 147
Query: 156 KPGNSFYLF-IKDNIDKK 172
+ + F I D+I +K
Sbjct: 148 CDVENKHEFKINDDIKQK 165
>gi|62362190|gb|AAX81532.1| amphiHMG1/2-like protein [Adineta ricciae]
Length = 142
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+PL+ +F F R I +++P++ + +++K + WKK+ + +KR E + A E
Sbjct: 15 PNAPKRPLSAFFLFSQDERPDIKKKSPSLSVGDISKEIGSRWKKVSDDVRKRYEQKAADE 74
Query: 106 KEIYAQNVKKY 116
K+ Y V +Y
Sbjct: 75 KKKYEVRVAEY 85
>gi|260802712|ref|XP_002596236.1| hypothetical protein BRAFLDRAFT_117987 [Branchiostoma floridae]
gi|229281490|gb|EEN52248.1| hypothetical protein BRAFLDRAFT_117987 [Branchiostoma floridae]
Length = 281
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 64/126 (50%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
P PK+P Y ++ Q + +NP ++ ++ + WK++ + EK+ N+ A
Sbjct: 46 FPTPPKRPANAYIRYVNQKMPTVRSQNPGAGPKQIVRICASLWKQLSDTEKQPYINDAAA 105
Query: 105 EKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLF 164
E+E Y + + + T E + + ++++ + R ++ ++ GKPK+P + + LF
Sbjct: 106 EREKYKSEYEDFKSDFTIEEWGEYQDSRRQRRRQLQNRRRREELQQLGKPKQPVHGYGLF 165
Query: 165 IKDNID 170
+K+ +
Sbjct: 166 VKEMLS 171
>gi|392354293|ref|XP_003751730.1| PREDICTED: high mobility group protein B3-like isoform 1 [Rattus
norvegicus]
Length = 241
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 131 PNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYMTKAAKL 190
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 191 KEKYEKDVADY 201
>gi|116283979|gb|AAH31423.1| UBTF protein [Homo sapiens]
Length = 313
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
>gi|397522857|ref|XP_003831465.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 4
[Pan paniscus]
Length = 328
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 34 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 93
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 94 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 144
Query: 172 KEYEG 176
+Y+
Sbjct: 145 DDYDD 149
>gi|124111160|gb|ABM91961.1| HMG20A [Pan troglodytes]
Length = 194
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E ++KE
Sbjct: 103 PKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKER 162
Query: 109 YAQNVKKYH 117
Y + +++Y
Sbjct: 163 YMKELEQYQ 171
>gi|121483890|gb|ABM54245.1| HMG20A [Pan paniscus]
Length = 194
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E ++KE
Sbjct: 103 PKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKER 162
Query: 109 YAQNVKKYH 117
Y + +++Y
Sbjct: 163 YMKELEQYQ 171
>gi|169793991|gb|ACA81392.1| Smarce1 variant 4 [Homo sapiens]
Length = 328
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 34 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 93
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 94 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 144
Query: 172 KEYEG 176
+Y+
Sbjct: 145 DDYDD 149
>gi|67524855|ref|XP_660489.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|74597086|sp|Q5B995.1|NHP6_EMENI RecName: Full=Non-histone chromosomal protein 6
gi|40744280|gb|EAA63456.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|259486178|tpe|CBF83812.1| TPA: Non-histone chromosomal protein 6
[Source:UniProtKB/Swiss-Prot;Acc:Q5B995] [Aspergillus
nidulans FGSC A4]
Length = 106
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 24 MPHLNSVT-TAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKL 82
MP N T ++ + P PK+ L+ Y F R+K+ E NP I +V K+
Sbjct: 1 MPKANPTRKTKATRETGGRKKKDPNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKM 60
Query: 83 VSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDE 119
+ E+WK + + E+K E++ A +K K+Y DE
Sbjct: 61 LGEKWKSLSDKERKPYEDKAAADK-------KRYEDE 90
>gi|358255365|dbj|GAA57072.1| high mobility group protein B1, partial [Clonorchis sinensis]
Length = 778
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 21/122 (17%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPNIKI--IEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
KPK LTPY F + +++P++ + +K SE+WK + EKK+ E+ AK+
Sbjct: 547 KPKGALTPYALFLQSMHADQKKKHPSVTLDFKTFSKECSEQWKNLTAKEKKKFEDLAAKD 606
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
KE Y + ++ Y E + K KR+ ++ PKK ++F+LF
Sbjct: 607 KERYRKEMQSY--------------EPPADEGKSRKRK-----KDPNAPKKALSAFFLFC 647
Query: 166 KD 167
D
Sbjct: 648 ND 649
Score = 36.2 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PKK L+ +F F R K+ +P+ K+ E+ K + + W+ K + E++ E
Sbjct: 633 PNAPKKALSAFFLFCNDERPKVKADHPDWKVSEIAKELGKRWETC--KNKSKYESQAQVE 690
Query: 106 KEIYAQ 111
K+ Y +
Sbjct: 691 KQRYEK 696
>gi|339242839|ref|XP_003377345.1| high mobility group protein 1.2 [Trichinella spiralis]
gi|316973861|gb|EFV57410.1| high mobility group protein 1.2 [Trichinella spiralis]
Length = 229
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ +F F R +I + +P+ K+ +V + + WK I E EK++ E+ AK+
Sbjct: 121 PNAPKRALSAFFFFSNSKRAEIQQAHPDWKVGQVAQELGRMWKAIDEDEKRKFEDMAAKD 180
Query: 106 KEIYAQNVKKY 116
+ Y +++K Y
Sbjct: 181 RTRYEEDMKNY 191
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 22/119 (18%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPN--IKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
KP+ TPY F + ++ PN +++ EV+K S +WK + + EK R
Sbjct: 36 KPRGKTTPYGFFVKMCYEEHKKKYPNENVQVTEVSKKCSAKWKTMTQEEKHRFY------ 89
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLF 164
E+ A++ +Y EL + LRK K KK + PK+ ++F+ F
Sbjct: 90 -ELAAKDRVRYDAELEAYGGDGLRKRKRSKK-------------DPNAPKRALSAFFFF 134
>gi|320169908|gb|EFW46807.1| hypothetical protein CAOG_04765 [Capsaspora owczarzaki ATCC 30864]
Length = 686
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 19/123 (15%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P +P +P T + KF + R + E+NPN+ ++ +L+ E WK + E ++++
Sbjct: 329 LPGEPHRPATAFIKFSEKHRAAVREQNPNVPYKDIARLLGERWKNLTEDQREKF------ 382
Query: 105 EKEIYAQNVKKYHDEL------TPEAI---EFLRKEKEVKKQKKEKREMKKLFRETGKPK 155
K+ Y +V+KY EL PE + E RKE++ + K ++ +PK
Sbjct: 383 -KKSYENDVRKYQKELESFNAANPELVAQREAARKERKTSRASKGDGGDDG---DSHRPK 438
Query: 156 KPG 158
+P
Sbjct: 439 RPS 441
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 68/138 (49%), Gaps = 26/138 (18%)
Query: 39 TSQPLSI------------PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEE 86
+S+PL I P PK+P Y F + R + ++ ++ + E+ L+++E
Sbjct: 220 SSEPLRIRGRRKKDAMEKDPNAPKRPPNGYALFVKRRRESLKQKRTDLSVQEIISLIAKE 279
Query: 87 WKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKK 146
WK++ A+KK E+ ++ E + KY ++ E+L + E+ K K +++ ++
Sbjct: 280 WKELPPAKKK----EFERQAEAL---LVKYKADME----EYLAEHPEMAKVAKNRQKSER 328
Query: 147 LFRETGKPKKPGNSFYLF 164
L G+P +P +F F
Sbjct: 329 L---PGEPHRPATAFIKF 343
>gi|390469080|ref|XP_002753935.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like isoform
2 [Callithrix jacchus]
Length = 411
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 69 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 128
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ L + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 129 SMKAYHNSLA--YLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 179
Query: 172 KEYE 175
+Y+
Sbjct: 180 DDYD 183
>gi|254569588|ref|XP_002491904.1| hypothetical protein [Komagataella pastoris GS115]
gi|238031701|emb|CAY69624.1| hypothetical protein PAS_chr2-2_0488 [Komagataella pastoris GS115]
Length = 306
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT YF + R +IME P + +E+T S++WK + E+ +
Sbjct: 90 PNAPKKPLTMYFAYSALARKEIMEERARKGLPPLSSLEMTHETSKKWKDLPSEERDEWKR 149
Query: 101 EYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREM 144
+Y +E E+Y +Y D+L E + ++ +K K E
Sbjct: 150 KYNEELELYQHEKDRYIDDLISTGAEIPEEYQKAAHTRKRKIEF 193
>gi|148745056|gb|AAI42509.1| SMARCE1 protein [Bos taurus]
Length = 376
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 34 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 93
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 94 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 144
Query: 172 KEYE 175
+Y+
Sbjct: 145 DDYD 148
>gi|326499588|dbj|BAJ86105.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 76/144 (52%), Gaps = 24/144 (16%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK+P++ YF + + R ++ + E+ K+ EEWK + EA+K E K+
Sbjct: 331 PSKPKQPMSAYFLYSQERRGALVAEKKTVP--EIGKITGEEWKGMTEAQKAPYEEAARKQ 388
Query: 106 KEIYAQNVKKYHDE------------------LTPEAIEFLRKEKE----VKKQKKEKRE 143
KE Y + ++ Y+ + L EA++ LRK+++ +KK K+++++
Sbjct: 389 KEAYQKQMEVYNQKKLGENASLEKEEEEQKKILKQEALQLLRKKEKADNIIKKTKEKRQK 448
Query: 144 MKKLFRETGKPKKPGNSFYLFIKD 167
K+ + +PKKP +SF LF K+
Sbjct: 449 KKQQNADPNRPKKPASSFLLFSKE 472
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +PKKP + + F + R ++ E P + ++ L+S +WK + AEKK + A+
Sbjct: 456 PNRPKKPASSFLLFSKEARKQLAEERPGVNNSTLSALISVKWKDLSSAEKKVWSQKAAQG 515
Query: 106 KEIYAQNVKKY 116
Y + +Y
Sbjct: 516 MAAYKMEMDEY 526
>gi|320168039|gb|EFW44938.1| hypothetical protein CAOG_02944 [Capsaspora owczarzaki ATCC 30864]
Length = 193
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKKP T + F +R ++ +NP +K+ ++ ++ + W ++ EA+K + + +
Sbjct: 12 PNKPKKPTTAFMYFSNAMRERVKTQNPGLKMTDIASVLGKLWGQLPEADKDKYQTMANSD 71
Query: 106 KEIYAQNVKKY 116
KE YA+ + Y
Sbjct: 72 KERYAKAMDGY 82
>gi|116283312|gb|AAH04676.1| Ubtf protein [Mus musculus]
Length = 354
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
>gi|403304559|ref|XP_003942863.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 3
[Saimiri boliviensis boliviensis]
Length = 376
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 34 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 93
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 94 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 144
Query: 172 KEYE 175
+Y+
Sbjct: 145 DDYD 148
>gi|50309549|ref|XP_454785.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643920|emb|CAG99872.1| KLLA0E18481p [Kluyveromyces lactis]
Length = 464
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P + YF F IR +++++ P+ K+ E++KL S +WK + + EKK +++
Sbjct: 315 QGPKRPSSAYFLFSISIRPELLKQYPDAKVPELSKLSSAKWKSMTDEEKKPFFDQFKTNW 374
Query: 107 EIYAQNVKKYHDELTPE--AIEFLRKEKEVK 135
E Y KKY + L P+ + FL+ K+++
Sbjct: 375 EKYRIARKKYEETLPPKRPSGPFLQFTKDIR 405
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 34/54 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
PK+P P+ +F IR ++E P+ +IE+TKL+ E+W+++ K++ + Y
Sbjct: 390 PKRPSGPFLQFTKDIRPLLVEEQPDKTLIEITKLIGEKWRELDGPSKQKYTDSY 443
>gi|296202792|ref|XP_002748613.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 3
[Callithrix jacchus]
Length = 376
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 34 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 93
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 94 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 144
Query: 172 KEYE 175
+Y+
Sbjct: 145 DDYD 148
>gi|156407416|ref|XP_001641540.1| predicted protein [Nematostella vectensis]
gi|156228679|gb|EDO49477.1| predicted protein [Nematostella vectensis]
Length = 361
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 42/66 (63%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ +NP+ K+ ++ K++ + W+ + +AEK+ EY EK+ Y +
Sbjct: 100 PLMPYMRYSRKVWDQVKNQNPDFKLWDIGKIIGQMWRDLDDAEKQEYMEEYEIEKQEYNE 159
Query: 112 NVKKYH 117
VK YH
Sbjct: 160 AVKLYH 165
>gi|397522855|ref|XP_003831464.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 3
[Pan paniscus]
Length = 376
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 34 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 93
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 94 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 144
Query: 172 KEYE 175
+Y+
Sbjct: 145 DDYD 148
>gi|395826460|ref|XP_003786436.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 3
[Otolemur garnettii]
Length = 376
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 34 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 93
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 94 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 144
Query: 172 KEYE 175
+Y+
Sbjct: 145 DDYD 148
>gi|332847655|ref|XP_003315497.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Pan
troglodytes]
gi|169793989|gb|ACA81391.1| Smarce1 variant 3 [Homo sapiens]
Length = 376
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 34 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 93
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 94 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 144
Query: 172 KEYE 175
+Y+
Sbjct: 145 DDYD 148
>gi|354546097|emb|CCE42826.1| hypothetical protein CPAR2_204690 [Candida parapsilosis]
Length = 232
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F F +R I E PN+ I++ +LV + W I + EK + ++
Sbjct: 86 PNAPKKPLTMFFAFSFHLRKMIAEERKKKGLPNLGAIDLNQLVKDRWDNISDEEKAKWKH 145
Query: 101 EYAKEKEIYAQNVKKYHDEL 120
+Y +E ++Y KY L
Sbjct: 146 KYEEEMKLYNVEKAKYEQSL 165
>gi|207080180|ref|NP_001128829.1| DKFZP459C0539 protein [Pongo abelii]
gi|55729939|emb|CAH91696.1| hypothetical protein [Pongo abelii]
Length = 376
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 34 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 93
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 94 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 144
Query: 172 KEYE 175
+Y+
Sbjct: 145 DDYD 148
>gi|426237947|ref|XP_004012919.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 2
[Ovis aries]
Length = 376
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 34 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 93
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 94 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 144
Query: 172 KEYE 175
+Y+
Sbjct: 145 DDYD 148
>gi|229595100|ref|XP_001020081.3| HMG box family protein [Tetrahymena thermophila]
gi|225566398|gb|EAR99836.3| HMG box family protein [Tetrahymena thermophila SB210]
Length = 143
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P KPK+P T +F ++ ++ K PN+K+ E+ +SEE+K + E EK++ E Y K
Sbjct: 14 LPSKPKRPQTGFFIYKSEVFAKRRTECPNLKVPEIVSKISEEYKALPEKEKQKYEEAYRK 73
Query: 105 EKEIY 109
EK Y
Sbjct: 74 EKATY 78
>gi|73965999|ref|XP_863005.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 8
[Canis lupus familiaris]
Length = 376
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 34 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 93
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 94 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 144
Query: 172 KEYE 175
+Y+
Sbjct: 145 DDYD 148
>gi|428163656|gb|EKX32716.1| FACT complex subunit ssrp1 [Guillardia theta CCMP2712]
Length = 746
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + + F R I++ NP+IK EV +SE WK + EKK E E AK
Sbjct: 549 PNAPKRPKSAWLLFCDAKREDIVKENPDIKFTEVNGKISEIWKNLSSDEKKPFEEEAAKL 608
Query: 106 KEIYAQNVKKYHDE 119
Y ++ KY E
Sbjct: 609 ASKYKEDKAKYDKE 622
>gi|254578116|ref|XP_002495044.1| ZYRO0B02068p [Zygosaccharomyces rouxii]
gi|238937934|emb|CAR26111.1| ZYRO0B02068p [Zygosaccharomyces rouxii]
Length = 477
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P + YF F IRN+++++ P K+ E++KL S WK++ E +KK E+ +
Sbjct: 330 PKRPSSAYFLFSMSIRNELLQQYPEAKVPELSKLASARWKELNEDQKKPFYEEFRTNWDK 389
Query: 109 YAQNVKKYHDELTP 122
Y +Y L P
Sbjct: 390 YRVERDQYEKTLPP 403
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P P+ +F +IR +++ NP +IE+TK++ E W+ + +K NEY E
Sbjct: 403 PKRPSGPFIQFTQEIRPIVVKENPEKNLIEITKIIGERWRSLDVGKK----NEYT---ET 455
Query: 109 YAQNVKKYHDELTPEAIE 126
Y + +K++ + PE E
Sbjct: 456 YKKRLKEW-ESCYPEEAE 472
>gi|255087726|ref|XP_002505786.1| histone chaperone [Micromonas sp. RCC299]
gi|226521056|gb|ACO67044.1| histone chaperone [Micromonas sp. RCC299]
Length = 643
Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +PK+PL+ + F + R ++E+NP+ + +V K + W++I KK E + A
Sbjct: 548 PNEPKRPLSAFMIFSKETRGDVLEKNPDFALGDVGKELGRRWREIDPELKKEFEAKAADA 607
Query: 106 KEIYAQNVKKY 116
K Y +K+Y
Sbjct: 608 KVAYEAAMKEY 618
>gi|349805567|gb|AEQ18256.1| putative smarce1 protein [Hymenochirus curtipes]
Length = 275
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 53 LTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQN 112
L PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y ++
Sbjct: 1 LMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNES 60
Query: 113 VKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDKK 172
+K YH+ +P + ++ + + +E+ ++ + G+P Y+ I+ D
Sbjct: 61 MKTYHN--SPAYLAYISAKSRAEAALEEESRQRQSRMDKGEP-------YMSIQPAEDPD 111
Query: 173 EYE 175
+Y+
Sbjct: 112 DYD 114
>gi|238880006|gb|EEQ43644.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 223
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKI-MERN----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F+F +R KI +ER P++ I++ ++ + W I EAEK +
Sbjct: 84 PNAPKKPLTMFFQFSYDLRKKIGIERKKKDLPSLSAIDMNSMIKDRWDSISEAEKAGYKK 143
Query: 101 EYAKEKEIYAQNVKKYHDEL 120
Y IY KKY + L
Sbjct: 144 RYDDAMIIYNIEKKKYEESL 163
>gi|68487936|ref|XP_712185.1| potential HMG-like DNA binding protein Hmo1p [Candida albicans
SC5314]
gi|68488933|ref|XP_711711.1| potential HMG-like DNA binding protein Hmo1p [Candida albicans
SC5314]
gi|46433032|gb|EAK92489.1| potential HMG-like DNA binding protein Hmo1p [Candida albicans
SC5314]
gi|46433556|gb|EAK92992.1| potential HMG-like DNA binding protein Hmo1p [Candida albicans
SC5314]
Length = 223
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKI-MERN----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F+F +R KI +ER P++ I++ ++ + W I EAEK +
Sbjct: 84 PNAPKKPLTMFFQFSYDLRKKIGIERKKKDLPSLSAIDMNSMIKDRWDSISEAEKAGYKK 143
Query: 101 EYAKEKEIYAQNVKKYHDEL 120
Y IY KKY + L
Sbjct: 144 RYDDAMIIYNIEKKKYEESL 163
>gi|335294675|ref|XP_003357285.1| PREDICTED: putative upstream-binding factor 1-like protein 3/5-like
[Sus scrofa]
Length = 496
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 78/149 (52%), Gaps = 18/149 (12%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLT Y +F ++R + ++++P + E+TK++SEE+KK+ E K + ++ KE
Sbjct: 191 PDFPKKPLTSYIRFFTEMRPQYLQKHPQLSNQELTKVLSEEYKKLPEQMKLKYTQDFQKE 250
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKE--------------KEVKKQKKEKREMKKLFRET 151
K+ + + + ++ E P+ + RK ++V+ + K M F
Sbjct: 251 KQEFEEKMAQF-KEQHPDLVRKSRKSAVPKGSQSRLQGNVQKVRSPPRNKVSMTMKFH-- 307
Query: 152 GKPKKPG-NSFYLFIKDNIDKKEYEGKSY 179
G+PKKP + ++ F +D + +G Y
Sbjct: 308 GEPKKPPMHGYHKFHQDLWSSWQLKGLPY 336
>gi|307205080|gb|EFN83551.1| High mobility group protein 20A [Harpegnathos saltator]
Length = 326
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+PLT YF+F R K +P++ ++TKL++ EW + +K++ + ++KE
Sbjct: 81 PKQPLTGYFRFLNDRREKARHEHPSLSFADITKLLAAEWSTLPSDQKQQYLDAAEQDKER 140
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKRE 143
Y + + Y EA EK+ +KQ + K+E
Sbjct: 141 YNREISDYK---QTEAYRLF-TEKQTEKQNENKKE 171
>gi|195382183|ref|XP_002049810.1| GJ20542 [Drosophila virilis]
gi|194144607|gb|EDW61003.1| GJ20542 [Drosophila virilis]
Length = 397
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 35 LKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAE 94
LK+ T + +++ PK PL Y +F R ++ +PN +E TK++ EEW ++ E
Sbjct: 69 LKKLTQRRINVAGAPKMPLNSYVRFMNDRREQLRREHPNRTALEHTKMIGEEWHQLTEDR 128
Query: 95 KKRLENEYAKEKEIYAQNVKKY 116
K AK+K +Y + + K+
Sbjct: 129 KAPYMEAAAKDKALYQEQMHKF 150
>gi|12836542|dbj|BAB23701.1| unnamed protein product [Mus musculus]
Length = 752
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKTKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 368 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 424
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 425 ALKAQSERK 433
>gi|427781171|gb|JAA56037.1| Putative high mobility group protein 20a [Rhipicephalus pulchellus]
Length = 308
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
P++PLT Y +F R + NP +VTKL++ EW K+ EK++ +E K++E
Sbjct: 59 PERPLTGYVRFLNDRREAVRAANPTANFPDVTKLLAIEWSKLSPQEKQKYLDEAEKDRER 118
Query: 109 YAQNVKKYH 117
Y++ +++Y
Sbjct: 119 YSKELEQYQ 127
>gi|449675723|ref|XP_002160469.2| PREDICTED: scm-like with four MBT domains protein 1-like [Hydra
magnipapillata]
Length = 558
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKPLTPY ++ + I ++P ++ ++S +W + + E+K E +Y KE +
Sbjct: 60 PKKPLTPYMSYRNMVFQDIKHKHPGCSPYDLACVISAKWSLLSDVERKVWEVKYEKEMKS 119
Query: 109 YAQNVKKYH 117
Y + ++ YH
Sbjct: 120 YEKKLRLYH 128
>gi|68163423|ref|NP_001020164.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Rattus norvegicus]
gi|81888093|sp|Q56A18.1|SMCE1_RAT RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1; AltName:
Full=BRG1-associated factor 57; Short=BAF57
gi|62089562|gb|AAH92210.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Rattus norvegicus]
Length = 376
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 34 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 93
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 94 SMKAYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 144
Query: 172 KEYE 175
+Y+
Sbjct: 145 DDYD 148
>gi|356498002|ref|XP_003517844.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
13-like [Glycine max]
Length = 302
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK P++ YF F R + N N +EV K+ EEWK + E +K+ E K
Sbjct: 120 PLKPKHPMSAYFLFTNDRRAALAAENKNF--LEVPKITFEEWKNMTEEQKRPYEEMAKKN 177
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKE-VKKQKKE 140
KE YA ++ Y + EA F+++E++ +K QK+E
Sbjct: 178 KEQYALEMEAYKQKKDEEAGHFMKEEEDHMKVQKQE 213
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 11/142 (7%)
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIY 109
K+P PY + RN+I + NP E++ ++ +WK + EKK E Y EKE Y
Sbjct: 8 KRPSPPYILWMKDQRNEIKKVNPEAGFKEISTMLGVKWKTVTAEEKKPYEGIYHAEKEAY 67
Query: 110 AQNVKKYHDE------LTPE-----AIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPG 158
Q + K E L E A+E L + + K++ ++ + K ++ KPK P
Sbjct: 68 LQVIAKEKHETESMRLLEDEQKQRTAMELLEQYMQFKQEAEKDGKKNKKEKDPLKPKHPM 127
Query: 159 NSFYLFIKDNIDKKEYEGKSYM 180
++++LF D E K+++
Sbjct: 128 SAYFLFTNDRRAALAAENKNFL 149
>gi|427778249|gb|JAA54576.1| Putative high mobility group protein 20a [Rhipicephalus pulchellus]
Length = 445
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
P++PLT Y +F R + NP +VTKL++ EW K+ EK++ +E K++E
Sbjct: 59 PERPLTGYVRFLNDRREAVRAANPTANFPDVTKLLAIEWSKLSPQEKQKYLDEAEKDRER 118
Query: 109 YAQNVKKYH 117
Y++ +++Y
Sbjct: 119 YSKELEQYQ 127
>gi|432844326|ref|XP_004065714.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like
[Oryzias latipes]
Length = 425
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ N+Y EK Y +
Sbjct: 67 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNDYEAEKIEYNE 126
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K YH+ +P + ++ + + +E+ ++ + G+P Y+ I+ D
Sbjct: 127 SMKAYHN--SPAYLAYVNAKGRAEAALEEESRQRQSRLDKGEP-------YMSIQPAEDP 177
Query: 172 KEYE 175
+Y+
Sbjct: 178 DDYD 181
>gi|334186863|ref|NP_001190816.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|332659408|gb|AEE84808.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 450
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 31/144 (21%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK P++ + + + R + E N ++ +EV K+ EEWK + + +K E K
Sbjct: 252 PLKPKHPVSAFLVYANERRAALREENKSV--VEVAKITGEEWKNLSDKKKAPYEKVAKKN 309
Query: 106 KEIYAQNVKKY-----HDELT-------------PEAIEFLRKEKE----VKKQKKEKRE 143
KE Y Q +++Y + L+ EA++ L+K+++ +KK+K E
Sbjct: 310 KETYLQAMEEYKRTKEEEALSQKKEEEELLKLHKQEALQMLKKKEKTDNLIKKKKNEN-- 367
Query: 144 MKKLFRETGKPKKPGNSFYLFIKD 167
+ KPKKP +S++LF KD
Sbjct: 368 -----VDPNKPKKPASSYFLFSKD 386
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKKP + YF F R K+ E P VT L+S +WK++ E EK+ + AK
Sbjct: 370 PNKPKKPASSYFLFSKDERKKLTEERPGTNNATVTALISLKWKELSEEEKQVYNGKAAKL 429
Query: 106 KEIYAQNVKKYH 117
E Y + V+ Y+
Sbjct: 430 MEAYKKEVEAYN 441
>gi|238486744|ref|XP_002374610.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
gi|317144043|ref|XP_003189559.1| non-histone chromosomal protein 6 [Aspergillus oryzae RIB40]
gi|220699489|gb|EED55828.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
Length = 104
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F R K+ E NP I +V K++ E+WK + EA+++ E++ A +
Sbjct: 22 PNAPKRGLSAYMFFANDNREKVREENPGISFGQVGKMLGEKWKALSEADRRPYEDKAAAD 81
Query: 106 KEIY 109
K+ Y
Sbjct: 82 KKRY 85
>gi|167536391|ref|XP_001749867.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771582|gb|EDQ85246.1| predicted protein [Monosiga brevicollis MX1]
Length = 197
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKK-------RL 98
P+ PKKPLT YF + R + +N N + ++ K++ EWK + +A KK RL
Sbjct: 123 PDAPKKPLTAYFLYAADRRAALRAQNRNATVADIAKIIGAEWKDLSDAVKKPYQDRADRL 182
Query: 99 ENEYAKEKEIY 109
+++Y KE E+Y
Sbjct: 183 KSQYQKEVELY 193
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK + Y F ++R + + NP+ K+ +V+KL+ W+++ +A KK E ++
Sbjct: 35 PNKPKNAQSAYMFFSQKVRPQFSKDNPDKKMTDVSKLIGAAWREMSDAAKKPYEEMARRD 94
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLF 164
K+ Y + Y + P E ++ K K + PKKP +++L+
Sbjct: 95 KQRYQHQMATY---VPPPTRELGKRGKRRK--------------DPDAPKKPLTAYFLY 136
>gi|307170751|gb|EFN62876.1| High mobility group protein 20A [Camponotus floridanus]
Length = 328
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+PL+ YF F R K+ NP++ E+TKL++ EW K+ +K++ + ++KE
Sbjct: 78 PKQPLSGYFLFLNDRREKVRSENPSLTFTEITKLLASEWSKLPGDQKQQYLDAAEQDKER 137
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKRE 143
Y + Y EA EK+ ++Q + K+E
Sbjct: 138 YNREFSNYK---QTEAYRLF-NEKQSERQNENKKE 168
>gi|169794011|gb|ACA81402.1| Smarce1 variant 5 [Rattus norvegicus]
gi|169794015|gb|ACA81404.1| Smarce1 variant 8 [Rattus norvegicus]
gi|169794017|gb|ACA81405.1| Smarce1 variant 9 [Rattus norvegicus]
Length = 107
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 55 PYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVK 114
PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +++K
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 115 KYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKP 154
YH+ +P + ++ + + +E+ ++ E G+P
Sbjct: 62 AYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP 99
>gi|169794001|gb|ACA81397.1| Smarce1 variant 5 [Mus musculus]
gi|169794005|gb|ACA81399.1| Smarce1 variant 8 [Mus musculus]
Length = 101
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 55 PYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVK 114
PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +++K
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 115 KYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKP 154
YH+ +P + ++ + + +E+ ++ E G+P
Sbjct: 62 AYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP 99
>gi|125538867|gb|EAY85262.1| hypothetical protein OsI_06634 [Oryza sativa Indica Group]
Length = 504
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +PKKP + + F + R ++ E P + +T LVS +WK++GEAEK+ + A+
Sbjct: 411 PNRPKKPASSFLLFSKEARRQLAEERPGVASSTLTALVSVKWKELGEAEKQAWNGKAAEA 470
Query: 106 KEIYAQNVKKY 116
Y +++++Y
Sbjct: 471 MAAYKRDMEEY 481
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 28/143 (19%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
+P++ YF + Q R ++ N+ E+ ++ EEWK + EAEK E K++E Y
Sbjct: 287 QPMSAYFVYTQQRRAALVAEKKNVP--EIGRITGEEWKAMSEAEKAPFEAAARKQREEYQ 344
Query: 111 QNVKKYHDE------------------LTPEAIEFLRKEKE----VKKQKKEKREMK--- 145
+ Y + EA++ L+K+++ +KK K+E+R+ K
Sbjct: 345 VEMAAYRQRKQEEAACQEKEEEEQKKIMKQEALQLLKKKEKTDNIIKKTKEEQRKKKVGG 404
Query: 146 -KLFRETGKPKKPGNSFYLFIKD 167
+ +PKKP +SF LF K+
Sbjct: 405 AAAAADPNRPKKPASSFLLFSKE 427
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIY 109
KKP Y + N+I + +P+ EV+ + +WK +G EK+ E Y +EKE Y
Sbjct: 158 KKPCPAYVLWCKDQWNEIKKESPDADFKEVSNALGAKWKALGAEEKQPYEERYRQEKEAY 217
Query: 110 AQNVKKYHDELTPEAIEFLRKEK 132
Q V + E EA++ L +E+
Sbjct: 218 LQVVGQEKRE--AEAMKLLEEER 238
>gi|148702165|gb|EDL34112.1| upstream binding transcription factor, RNA polymerase I, isoform
CRA_b [Mus musculus]
Length = 752
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 368 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 424
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 425 ALKAQSERK 433
>gi|443684506|gb|ELT88434.1| hypothetical protein CAPTEDRAFT_172235 [Capitella teleta]
Length = 734
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK+P + YF + ++R +I NP+ + ++ KL + WK++ +K R E K
Sbjct: 547 PNKPKRPQSAYFLWLNEMREEIKAENPDAGVTDIAKLAGQRWKEV--TDKTRWEGLAVKA 604
Query: 106 KEIYAQNVKKY 116
KE Y + +++Y
Sbjct: 605 KESYEKAMEEY 615
>gi|427778651|gb|JAA54777.1| Putative high mobility group protein 20a [Rhipicephalus pulchellus]
Length = 371
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
P++PLT Y +F R + NP +VTKL++ EW K+ EK++ +E K++E
Sbjct: 59 PERPLTGYVRFLNDRREAVRAANPTANFPDVTKLLAIEWSKLSPQEKQKYLDEAEKDRER 118
Query: 109 YAQNVKKYH 117
Y++ +++Y
Sbjct: 119 YSKELEQYQ 127
>gi|312381012|gb|EFR26863.1| hypothetical protein AND_06768 [Anopheles darlingi]
Length = 333
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK PLT Y ++ + R+ + +++PN+ +++TKL++E+W K+ E +KK +KE
Sbjct: 76 PKHPLTGYVRYMNEHRDGVRQKHPNLSHMDLTKLMAEDWSKLPEDKKKPYLEAAEADKER 135
Query: 109 YAQNVKKY 116
Y + + +Y
Sbjct: 136 YNKEILEY 143
>gi|395532746|ref|XP_003768429.1| PREDICTED: nucleolar transcription factor 1 isoform 2 [Sarcophilus
harrisii]
Length = 726
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 368 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 424
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 425 ALKAQSERK 433
>gi|358410870|ref|XP_003581858.1| PREDICTED: high mobility group protein B3-like [Bos taurus]
Length = 197
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ N+ AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKL 149
Query: 106 KEIYAQNVKKY 116
E Y ++V Y
Sbjct: 150 XEKYEKDVADY 160
>gi|122053886|gb|ABM65928.1| HMG20A [Ateles geoffroyi]
gi|124054190|gb|ABM89290.1| HMG20A [Pongo pygmaeus]
Length = 115
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK PLT Y +F + R ++ + P + E+T+++ EW K+ EK+R +E ++KE
Sbjct: 24 PKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKER 83
Query: 109 YAQNVKKYH 117
Y + +++Y
Sbjct: 84 YMKELEQYQ 92
>gi|338711830|ref|XP_003362590.1| PREDICTED: nucleolar transcription factor 1 isoform 2 [Equus
caballus]
Length = 709
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
>gi|189095264|ref|NP_001099193.2| nucleolar transcription factor 1 isoform 1 [Rattus norvegicus]
Length = 727
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 368 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 424
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 425 ALKAQSERK 433
>gi|113205053|ref|NP_001037848.1| nucleolar transcription factor 1 isoform 2 [Mus musculus]
gi|148702164|gb|EDL34111.1| upstream binding transcription factor, RNA polymerase I, isoform
CRA_a [Mus musculus]
Length = 727
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 368 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 424
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 425 ALKAQSERK 433
>gi|189095262|ref|NP_001121162.1| nucleolar transcription factor 1 isoform 2 [Rattus norvegicus]
gi|136654|sp|P25977.1|UBF1_RAT RecName: Full=Nucleolar transcription factor 1; AltName:
Full=Upstream-binding factor 1; Short=UBF-1
Length = 764
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|444322059|ref|XP_004181685.1| hypothetical protein TBLA_0G02260 [Tetrapisispora blattae CBS 6284]
gi|387514730|emb|CCH62166.1| hypothetical protein TBLA_0G02260 [Tetrapisispora blattae CBS 6284]
Length = 497
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P + YF F IR+ ++E+ P K+ E++KL S WK++ + EKK +E+ E
Sbjct: 349 PKRPSSAYFLFSMSIRSDLLEKYPQAKVPELSKLASARWKELTDDEKKPFYDEFRTNWEK 408
Query: 109 YAQNVKKYHDELTP 122
Y +Y L P
Sbjct: 409 YRVLRSEYEKTLPP 422
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
PK+P P+ +F +IR +++ NP+ +IE+TKL+ E W+++ ++K EY K
Sbjct: 422 PKRPSGPFIQFTQEIRPIVVKENPDKNLIEITKLIGERWRQLDPSKKAEYTEEYRK 477
>gi|113205057|ref|NP_035681.2| nucleolar transcription factor 1 isoform 1 [Mus musculus]
gi|148702166|gb|EDL34113.1| upstream binding transcription factor, RNA polymerase I, isoform
CRA_c [Mus musculus]
Length = 764
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|344252073|gb|EGW08177.1| Nucleolar transcription factor 1 [Cricetulus griseus]
Length = 727
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 368 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 424
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 425 ALKAQSERK 433
>gi|440800418|gb|ELR21457.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 135
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
IP K+P T Y + R K+ E NP+ E+TKLVS +W + E EK E AK
Sbjct: 44 IPPGVKRPKTAYIIYAQSARAKVKEENPSAGFGELTKLVSAQWNAMSEEEKAPFAEEAAK 103
Query: 105 EKEIYAQNVK 114
+K+ Y + VK
Sbjct: 104 DKKRYEREVK 113
>gi|313224463|emb|CBY20253.1| unnamed protein product [Oikopleura dioica]
Length = 671
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+ ++ YF F + R I NP IK+ EV+K+ E W++I +K + E + K+K
Sbjct: 550 DGPKRAMSAYFFFINEERENIKRDNPGIKVTEVSKIAGERWREINANDKAKYEEKALKDK 609
Query: 107 EIY 109
E Y
Sbjct: 610 ERY 612
>gi|441660452|ref|XP_004093272.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar transcription factor 1
[Nomascus leucogenys]
Length = 764
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|355754228|gb|EHH58193.1| Upstream-binding factor 1 [Macaca fascicularis]
Length = 764
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|301768751|ref|XP_002919784.1| PREDICTED: nucleolar transcription factor 1-like isoform 2
[Ailuropoda melanoleuca]
Length = 731
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 368 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 424
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 425 ALKAQSERK 433
>gi|451847653|gb|EMD60960.1| hypothetical protein COCSADRAFT_98214 [Cochliobolus sativus ND90Pr]
Length = 106
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F + R K+ E NP IK EV KL+ E+WK + E +++ E + A +
Sbjct: 25 PNAPKRGLSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNEKQRQPYEAKAALD 84
Query: 106 KEIYAQNVKKY 116
K+ Y Q Y
Sbjct: 85 KKRYEQEKAAY 95
>gi|444516641|gb|ELV11232.1| Nucleolar transcription factor 1 [Tupaia chinensis]
Length = 806
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 119 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 178
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 179 KQEFERNLARFRED-HPDLIQNAKK 202
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 414 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 470
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 471 ALKAQSERK 479
>gi|321453063|gb|EFX64340.1| hypothetical protein DAPPUDRAFT_305068 [Daphnia pulex]
Length = 723
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 45/76 (59%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
L P+ P+KPL PY ++ ++ +++ N +K+ E+ K++ + W+ + + +K+ EY
Sbjct: 89 LKPPKAPEKPLMPYMRYSRKVWDEVKAANQELKLWEIGKIIGQMWRDLPDGDKQEFVEEY 148
Query: 103 AKEKEIYAQNVKKYHD 118
EK Y + +K YH+
Sbjct: 149 ETEKVEYERTLKAYHN 164
>gi|194216826|ref|XP_001495593.2| PREDICTED: nucleolar transcription factor 1 isoform 1 [Equus
caballus]
Length = 746
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
>gi|410051230|ref|XP_003315456.2| PREDICTED: LOW QUALITY PROTEIN: nucleolar transcription factor 1
isoform 2 [Pan troglodytes]
Length = 764
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|136653|sp|P25976.1|UBF1_MOUSE RecName: Full=Nucleolar transcription factor 1; AltName:
Full=Upstream-binding factor 1; Short=UBF-1
gi|55116|emb|CAA43222.1| transcription factor UBF [Mus musculus]
Length = 765
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLTEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|410981339|ref|XP_003997028.1| PREDICTED: nucleolar transcription factor 1 [Felis catus]
Length = 764
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|395532744|ref|XP_003768428.1| PREDICTED: nucleolar transcription factor 1 isoform 1 [Sarcophilus
harrisii]
Length = 763
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|359077018|ref|XP_003587499.1| PREDICTED: nucleolar transcription factor 1 isoform 2 [Bos taurus]
Length = 720
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 368 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 424
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 425 ALKAQSERK 433
>gi|22204249|emb|CAD43431.1| novel protein similar to human upstream binding transcription
factor, RNA polymerase I (UBTF) [Danio rerio]
Length = 682
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ + +K++ ++ +E
Sbjct: 101 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPDRKKEKYVKDFLRE 160
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEV 134
KE + ++ K+ E P+ +E + K+ V
Sbjct: 161 KETFMLSMMKFKQE-HPDLLENVNKKSNV 188
>gi|417404205|gb|JAA48872.1| Putative nucleolar transcription factor 1 [Desmodus rotundus]
Length = 727
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 36 KQQTSQPLS----------IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSE 85
K+QT+ P S EKPK+P++ F F + R ++ E P + E+T+L++
Sbjct: 347 KKQTTSPASKKPSQEGGKGSSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLAR 406
Query: 86 EWKKIGEAEKKRLENEYAKEKEIYAQNVKK 115
W + E +K + + A+E + AQ+ +K
Sbjct: 407 MWNDLSEKKKAKYK---AREAALKAQSERK 433
>gi|344285168|ref|XP_003414335.1| PREDICTED: nucleolar transcription factor 1 isoform 1 [Loxodonta
africana]
Length = 727
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 368 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 424
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 425 ALKAQSERK 433
>gi|115529449|ref|NP_001070152.1| nucleolar transcription factor 1 isoform b [Homo sapiens]
gi|115529451|ref|NP_001070151.1| nucleolar transcription factor 1 isoform b [Homo sapiens]
gi|297700939|ref|XP_002827485.1| PREDICTED: nucleolar transcription factor 1 isoform 2 [Pongo
abelii]
gi|297700941|ref|XP_002827486.1| PREDICTED: nucleolar transcription factor 1 isoform 3 [Pongo
abelii]
gi|397468494|ref|XP_003805915.1| PREDICTED: nucleolar transcription factor 1 isoform 1 [Pan
paniscus]
gi|426347947|ref|XP_004041603.1| PREDICTED: nucleolar transcription factor 1 isoform 1 [Gorilla
gorilla gorilla]
gi|426347949|ref|XP_004041604.1| PREDICTED: nucleolar transcription factor 1 isoform 2 [Gorilla
gorilla gorilla]
gi|28971|emb|CAA40016.1| autoantigen NOR-90 [Homo sapiens]
gi|27503023|gb|AAH42297.1| Upstream binding transcription factor, RNA polymerase I [Homo
sapiens]
gi|380816194|gb|AFE79971.1| nucleolar transcription factor 1 isoform b [Macaca mulatta]
gi|383411705|gb|AFH29066.1| nucleolar transcription factor 1 isoform b [Macaca mulatta]
gi|410221614|gb|JAA08026.1| upstream binding transcription factor, RNA polymerase I [Pan
troglodytes]
gi|410254394|gb|JAA15164.1| upstream binding transcription factor, RNA polymerase I [Pan
troglodytes]
gi|410299128|gb|JAA28164.1| upstream binding transcription factor, RNA polymerase I [Pan
troglodytes]
gi|410356907|gb|JAA44548.1| upstream binding transcription factor, RNA polymerase I [Pan
troglodytes]
gi|410357062|gb|JAA44553.1| upstream binding transcription factor, RNA polymerase I [Pan
troglodytes]
Length = 727
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 368 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 424
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 425 ALKAQSERK 433
>gi|402900489|ref|XP_003919709.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar transcription factor 1
[Papio anubis]
Length = 765
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|395826233|ref|XP_003786323.1| PREDICTED: nucleolar transcription factor 1 isoform 1 [Otolemur
garnettii]
Length = 727
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 368 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 424
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 425 ALKAQSERK 433
>gi|384949228|gb|AFI38219.1| nucleolar transcription factor 1 isoform b [Macaca mulatta]
Length = 727
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 368 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 424
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 425 ALKAQSERK 433
>gi|301768749|ref|XP_002919783.1| PREDICTED: nucleolar transcription factor 1-like isoform 1
[Ailuropoda melanoleuca]
Length = 768
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|384949230|gb|AFI38220.1| nucleolar transcription factor 1 isoform a [Macaca mulatta]
Length = 764
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|451996730|gb|EMD89196.1| hypothetical protein COCHEDRAFT_1107529 [Cochliobolus
heterostrophus C5]
Length = 105
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
++ P PK+ L+ Y F + R K+ E NP IK EV KL+ E+WK + + +++ E +
Sbjct: 21 VTDPNAPKRGLSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNDKQRQPYEAKA 80
Query: 103 AKEKEIYAQNVKKY 116
A +K+ Y Q Y
Sbjct: 81 ALDKKRYEQEKAAY 94
>gi|7657671|ref|NP_055048.1| nucleolar transcription factor 1 isoform a [Homo sapiens]
gi|397468496|ref|XP_003805916.1| PREDICTED: nucleolar transcription factor 1 isoform 2 [Pan
paniscus]
gi|426347951|ref|XP_004041605.1| PREDICTED: nucleolar transcription factor 1 isoform 3 [Gorilla
gorilla gorilla]
gi|426347953|ref|XP_004041606.1| PREDICTED: nucleolar transcription factor 1 isoform 4 [Gorilla
gorilla gorilla]
gi|136652|sp|P17480.1|UBF1_HUMAN RecName: Full=Nucleolar transcription factor 1; AltName:
Full=Autoantigen NOR-90; AltName: Full=Upstream-binding
factor 1; Short=UBF-1
gi|37574|emb|CAA37548.1| unnamed protein product [Homo sapiens]
gi|509241|emb|CAA37469.1| unnamed protein product [Homo sapiens]
gi|158256898|dbj|BAF84422.1| unnamed protein product [Homo sapiens]
gi|158258473|dbj|BAF85207.1| unnamed protein product [Homo sapiens]
gi|355568764|gb|EHH25045.1| Upstream-binding factor 1 [Macaca mulatta]
gi|380816196|gb|AFE79972.1| nucleolar transcription factor 1 isoform a [Macaca mulatta]
gi|380816198|gb|AFE79973.1| nucleolar transcription factor 1 isoform a [Macaca mulatta]
gi|383411703|gb|AFH29065.1| nucleolar transcription factor 1 isoform a [Macaca mulatta]
gi|410221612|gb|JAA08025.1| upstream binding transcription factor, RNA polymerase I [Pan
troglodytes]
gi|410221616|gb|JAA08027.1| upstream binding transcription factor, RNA polymerase I [Pan
troglodytes]
gi|410254390|gb|JAA15162.1| upstream binding transcription factor, RNA polymerase I [Pan
troglodytes]
gi|410254392|gb|JAA15163.1| upstream binding transcription factor, RNA polymerase I [Pan
troglodytes]
gi|410299124|gb|JAA28162.1| upstream binding transcription factor, RNA polymerase I [Pan
troglodytes]
gi|410299126|gb|JAA28163.1| upstream binding transcription factor, RNA polymerase I [Pan
troglodytes]
gi|226839|prf||1608205A nucleolar transcription factor UBF
Length = 764
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|417404450|gb|JAA48977.1| Putative nucleolar transcription factor 1 [Desmodus rotundus]
Length = 764
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 36 KQQTSQPLS----------IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSE 85
K+QT+ P S EKPK+P++ F F + R ++ E P + E+T+L++
Sbjct: 384 KKQTTSPASKKPSQEGGKGSSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLAR 443
Query: 86 EWKKIGEAEKKRLENEYAKEKEIYAQNVKK 115
W + E +K + + A+E + AQ+ +K
Sbjct: 444 MWNDLSEKKKAKYK---AREAALKAQSERK 470
>gi|395826235|ref|XP_003786324.1| PREDICTED: nucleolar transcription factor 1 isoform 2 [Otolemur
garnettii]
gi|395826237|ref|XP_003786325.1| PREDICTED: nucleolar transcription factor 1 isoform 3 [Otolemur
garnettii]
Length = 764
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|426238169|ref|XP_004013029.1| PREDICTED: nucleolar transcription factor 1 [Ovis aries]
Length = 720
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 368 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 424
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 425 ALKAQSERK 433
>gi|405954140|gb|EKC21661.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1 [Crassostrea gigas]
Length = 591
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 42/67 (62%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ + + ++P++K+ E+ K++ + W+ + + +K+ +EY EK Y
Sbjct: 72 PLMPYMRYSRRVWDSVKAQHPDLKLWEIGKIIGQMWRDLSDQDKQEYMDEYEMEKSHYND 131
Query: 112 NVKKYHD 118
+KKYH+
Sbjct: 132 EMKKYHN 138
>gi|348559969|ref|XP_003465787.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar transcription factor
1-like [Cavia porcellus]
Length = 764
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|449280021|gb|EMC87421.1| Nucleolar transcription factor 1 [Columba livia]
Length = 755
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKKY 116
+ AQ+ KK+
Sbjct: 462 AMKAQSEKKH 471
>gi|431912023|gb|ELK14164.1| Nucleolar transcription factor 1 [Pteropus alecto]
Length = 725
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|350590278|ref|XP_003358065.2| PREDICTED: nucleolar transcription factor 1-like [Sus scrofa]
Length = 664
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|158258591|dbj|BAF85266.1| unnamed protein product [Homo sapiens]
Length = 764
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|403306298|ref|XP_003943676.1| PREDICTED: nucleolar transcription factor 1 [Saimiri boliviensis
boliviensis]
Length = 764
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|290560936|ref|NP_001166812.1| high mobility group box 3 [Rattus norvegicus]
gi|392354295|ref|XP_003751731.1| PREDICTED: high mobility group protein B3-like isoform 2 [Rattus
norvegicus]
gi|149027076|gb|EDL82825.1| rCG56793 [Rattus norvegicus]
gi|165971283|gb|AAI58740.1| Hmgb3 protein [Rattus norvegicus]
Length = 200
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYMTKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|440895486|gb|ELR47659.1| Nucleolar transcription factor 1 [Bos grunniens mutus]
Length = 757
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|344285170|ref|XP_003414336.1| PREDICTED: nucleolar transcription factor 1 isoform 2 [Loxodonta
africana]
Length = 764
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|325303032|tpg|DAA34552.1| TPA_inf: high mobility group protein C [Amblyomma variegatum]
Length = 212
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 31 TTAGLKQQTSQPLSI-PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKK 89
+T GL Q SI P PK+P + + F R +++ NP + EV K V+ +WK
Sbjct: 9 STRGLAAQKHSDTSILPPAPKRPPSGFILFAADARKAVLKENPALTPTEVIKTVAGKWKI 68
Query: 90 IGEAEKKRLENEYA---KEK-EIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMK 145
E K N+YA +E+ E Y + Y LT + E L + + KK K KR +
Sbjct: 69 ADEVTK----NKYAALSRERFEQYEKEKAAYTSILTEQQKEALAEVRLDKKLKVTKRRLN 124
Query: 146 KLFRETGKPKKPGNSFYLF 164
+E +PK +++ LF
Sbjct: 125 DKLKELDRPKGARSAYVLF 143
>gi|297487171|ref|XP_002696088.1| PREDICTED: nucleolar transcription factor 1 isoform 1 [Bos taurus]
gi|359077023|ref|XP_003587500.1| PREDICTED: nucleolar transcription factor 1 isoform 3 [Bos taurus]
gi|296476272|tpg|DAA18387.1| TPA: upstream binding transcription factor, RNA polymerase I [Bos
taurus]
Length = 757
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 462 ALKAQSERK 470
>gi|281354233|gb|EFB29817.1| hypothetical protein PANDA_008449 [Ailuropoda melanoleuca]
Length = 749
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 90 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 149
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 150 KQEFERNLARFRED-HPDLIQNAKK 173
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 386 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 442
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 443 ALKAQSERK 451
>gi|255003831|ref|NP_001005395.1| upstream binding transcription factor, RNA polymerase I [Danio
rerio]
Length = 735
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ + +K++ ++ +E
Sbjct: 101 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPDRKKEKYVKDFLRE 160
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEV 134
KE + ++ K+ E P+ +E + K+ V
Sbjct: 161 KETFMLSMMKFKQE-HPDLLENVNKKSNV 188
>gi|156119521|ref|NP_001095257.1| nucleolar transcription factor 1-A [Xenopus laevis]
gi|136655|sp|P25979.1|UBF1A_XENLA RecName: Full=Nucleolar transcription factor 1-A; AltName:
Full=Upstream-binding factor 1-A; Short=UBF-1-A;
Short=xUBF-1
gi|65190|emb|CAA40487.1| upstream binding factor 1 [Xenopus laevis]
Length = 677
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 51/74 (68%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
PE PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PEFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDE 119
K + +N+ ++ +E
Sbjct: 169 KLEFERNLARFREE 182
>gi|321454328|gb|EFX65503.1| hypothetical protein DAPPUDRAFT_303621 [Daphnia pulex]
Length = 806
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 18/133 (13%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P++PKKPLT Y F + ++ ++E+ P + + E++K++++ + ++ + +K + KE
Sbjct: 194 PDQPKKPLTSYMLFYMEQKDAVLEKQPGLGMTELSKIIAKMYHELSDRKKTKYSELAEKE 253
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
KE Y + +KK+ D P+ I L K K+ K P KP F LF
Sbjct: 254 KEAYQEKMKKFMD-AHPDYI--LPKSKQTSK---------------AVPPKPPTPFKLFS 295
Query: 166 KDNIDKKEYEGKS 178
+ + K EG S
Sbjct: 296 DEKMPKFVGEGMS 308
>gi|47497872|dbj|BAD20056.1| putative embryogenic callus protein 98b [Oryza sativa Japonica
Group]
gi|50252043|dbj|BAD27975.1| putative embryogenic callus protein 98b [Oryza sativa Japonica
Group]
gi|125581537|gb|EAZ22468.1| hypothetical protein OsJ_06136 [Oryza sativa Japonica Group]
Length = 504
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +PKKP + + F + R ++ E P + +T LVS +WK++GEAEK+ + A+
Sbjct: 411 PNRPKKPASSFLLFSKEARRQLAEERPGVASSTLTALVSVKWKELGEAEKQAWNGKAAEA 470
Query: 106 KEIYAQNVKKY 116
Y +++++Y
Sbjct: 471 MAAYKRDMEEY 481
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 28/143 (19%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
+P++ YF + Q R ++ N+ E+ ++ EEWK + EAEK E K++E Y
Sbjct: 287 QPMSAYFVYTQQRRAALVAEKKNVP--EIGRITGEEWKAMSEAEKAPFEAAARKQREEYQ 344
Query: 111 QNVKKYHDE------------------LTPEAIEFLRKEKE----VKKQKKEKREMK--- 145
+ Y + EA++ L+K+++ +KK K+E+R+ K
Sbjct: 345 VEMAAYRQRKQEEAACQEKEEEEQKKIMKQEALQLLKKKEKTDNIIKKTKEEQRKKKVGG 404
Query: 146 -KLFRETGKPKKPGNSFYLFIKD 167
+ +PKKP +SF LF K+
Sbjct: 405 AAAAADPNRPKKPASSFLLFSKE 427
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIY 109
KKP Y + N+I + +P+ EV+ + +WK +G EK+ E Y +EKE Y
Sbjct: 158 KKPCPAYVLWCKDQWNEIKKESPDADFKEVSNALGAKWKALGAEEKQPYEERYRQEKEAY 217
Query: 110 AQNVKKYHDELTPEAIEFLRKEK 132
Q V + E EA++ L +E+
Sbjct: 218 LQVVGQEKRE--AEAMKLLEEEQ 238
>gi|237845111|ref|XP_002371853.1| high mobility group protein [Toxoplasma gondii ME49]
gi|211969517|gb|EEB04713.1| high mobility group protein [Toxoplasma gondii ME49]
gi|221480801|gb|EEE19228.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221501467|gb|EEE27242.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 302
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 21 SCLMPHLNSVTTAGLKQQTSQPLSI---PEKPKKPLTPYFKFQGQIRNKIMERNPNIK-- 75
+C P N + T K+ + P PK+PL+ + F R +I+ +NP +K
Sbjct: 197 ACCYPWWNRLNTMAPKKTIVKKTKAKKDPNAPKRPLSAFIFFSKDKREEIIRKNPELKSK 256
Query: 76 IIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKY 116
+ EV K+V E W K+ +A+KK E++ +K Y + + Y
Sbjct: 257 LAEVGKMVGEAWGKLSDAQKKPYESKAVADKARYEREMIAY 297
>gi|348680492|gb|EGZ20308.1| hypothetical protein PHYSODRAFT_285400 [Phytophthora sojae]
Length = 211
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ YF F IR ++ + NPN KI E+ L++E W+ + + ++ + + + +
Sbjct: 110 PNAPKRALSAYFFFCNDIRQEVRDENPNKKITEIATLLAERWRALPDKKRAKYQKMHEEA 169
Query: 106 KEIYAQNVKKYH 117
K Y Q + Y+
Sbjct: 170 KVKYQQQMDAYN 181
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 43/85 (50%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+ L+ + F IR + + P + ++++ + WKKI + E++ + A +K
Sbjct: 25 PKRALSAFMFFSNDIRETVKKEMPELAFLQISSEIGRRWKKISDEERRPYDELAAADKRR 84
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKE 133
Y + + Y + + E + RK+K+
Sbjct: 85 YQEEKEDYVPDPSFETTKGSRKKKD 109
>gi|297273243|ref|XP_001100425.2| PREDICTED: nucleolar transcription factor 1 [Macaca mulatta]
Length = 658
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 40 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 99
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 100 KQEFERNLARFRED-HPDLIQNAKK 123
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 299 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 355
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 356 ALKAQSERK 364
>gi|169610541|ref|XP_001798689.1| hypothetical protein SNOG_08374 [Phaeosphaeria nodorum SN15]
gi|160702095|gb|EAT84650.2| hypothetical protein SNOG_08374 [Phaeosphaeria nodorum SN15]
Length = 106
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F + R+K+ E NP IK EV K++ E+WK + E ++ E + A +
Sbjct: 25 PNAPKRGLSAYMFFANEQRDKVREDNPGIKFGEVGKMLGEKWKALNEKQRTPYEAKAAAD 84
Query: 106 KEIYAQNVKKYH 117
K+ Y + Y
Sbjct: 85 KKRYEEEKAAYQ 96
>gi|116778852|gb|ABK21026.1| unknown [Picea sitchensis]
gi|116782574|gb|ABK22556.1| unknown [Picea sitchensis]
gi|116782678|gb|ABK22606.1| unknown [Picea sitchensis]
gi|116782786|gb|ABK22657.1| unknown [Picea sitchensis]
gi|116782898|gb|ABK22712.1| unknown [Picea sitchensis]
gi|116791878|gb|ABK26144.1| unknown [Picea sitchensis]
gi|148907501|gb|ABR16881.1| unknown [Picea sitchensis]
gi|224284566|gb|ACN40016.1| unknown [Picea sitchensis]
gi|224285212|gb|ACN40332.1| unknown [Picea sitchensis]
gi|224286734|gb|ACN41070.1| unknown [Picea sitchensis]
Length = 157
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVT-KLVSEEWKKIGEAEKKRLENEYAK 104
P KPK+P + +F F R E+NPN+K + V K ++WK + EA+K + K
Sbjct: 49 PNKPKRPASAFFVFMEDFRKTYKEKNPNVKSVSVVGKAGGDKWKSMSEADKAPYVAKAGK 108
Query: 105 EKEIYAQNVKKYHDELTPEA 124
K Y +N+ Y+++ T A
Sbjct: 109 RKTEYEKNMAAYNNKQTSTA 128
>gi|156837480|ref|XP_001642765.1| hypothetical protein Kpol_348p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113330|gb|EDO14907.1| hypothetical protein Kpol_348p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 389
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P + YF F IRN++++ +P+ K+ E++KL S WK++ + +KK +E+ E
Sbjct: 241 PKRPSSAYFLFSMSIRNELLQEHPHAKVPELSKLASIRWKELTDDQKKPYYDEFRSNWEK 300
Query: 109 YAQNVKKYHDELTP 122
Y +Y L P
Sbjct: 301 YRVLRDEYEKTLPP 314
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 33/54 (61%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
PK+P P+ +F IR +++ NP+ +IE+TK++ E+W+++ +K Y
Sbjct: 314 PKRPSGPFIQFTQDIRPLVVKENPDKNLIEITKIIGEKWRQLDPIKKAEYTENY 367
>gi|194388690|dbj|BAG60313.1| unnamed protein product [Homo sapiens]
Length = 661
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 43 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 102
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 103 KQEFERNLARFRED-HPDLIQNAKK 126
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P E+T+L++ W + E +K + + A+E
Sbjct: 302 EKPKRPVSAMFIFSEEKRRQLQEERPEHSESELTRLLARMWNDLSEKKKAKYK---AREA 358
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 359 ALKAQSERK 367
>gi|156401428|ref|XP_001639293.1| predicted protein [Nematostella vectensis]
gi|156226420|gb|EDO47230.1| predicted protein [Nematostella vectensis]
Length = 265
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK PLT Y +F + R K+ +P + EVTK++ EW K+ + +K+R ++ ++KE
Sbjct: 21 PKAPLTGYVQFLNEQREKVRSEHPELPFPEVTKILGAEWSKMSQDDKQRYLDDAERDKER 80
Query: 109 YAQNVKKY 116
Y ++ Y
Sbjct: 81 YIIELENY 88
>gi|392333067|ref|XP_003752781.1| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
gi|392353165|ref|XP_001067503.2| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
Length = 212
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 104 PNAPKRPPSGFFLFCSEFRPKIKSANPGISIEDVVKKLGEMWNNLSDSEKQPYMTKAAKL 163
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 164 KEKYEKDVADY 174
>gi|358417529|ref|XP_601299.5| PREDICTED: nucleolar transcription factor 1 isoform 1 [Bos taurus]
Length = 654
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 43 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 102
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 103 KQEFERNLARFRED-HPDLIQNAKK 126
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 302 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 358
Query: 107 EIYAQNVKK 115
+ AQ+ +K
Sbjct: 359 ALKAQSERK 367
>gi|115445389|ref|NP_001046474.1| Os02g0258200 [Oryza sativa Japonica Group]
gi|113536005|dbj|BAF08388.1| Os02g0258200, partial [Oryza sativa Japonica Group]
Length = 269
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +PKKP + + F + R ++ E P + +T LVS +WK++GEAEK+ + A+
Sbjct: 176 PNRPKKPASSFLLFSKEARRQLAEERPGVASSTLTALVSVKWKELGEAEKQAWNGKAAEA 235
Query: 106 KEIYAQNVKKY 116
Y +++++Y
Sbjct: 236 MAAYKRDMEEY 246
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 28/143 (19%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
+P++ YF + Q R ++ N+ E+ ++ EEWK + EAEK E K++E Y
Sbjct: 52 QPMSAYFVYTQQRRAALVAEKKNVP--EIGRITGEEWKAMSEAEKAPFEAAARKQREEYQ 109
Query: 111 QNVKKYHDE------------------LTPEAIEFLRKEKE----VKKQKKEKREMK--- 145
+ Y + EA++ L+K+++ +KK K+E+R+ K
Sbjct: 110 VEMAAYRQRKQEEAACQEKEEEEQKKIMKQEALQLLKKKEKTDNIIKKTKEEQRKKKVGG 169
Query: 146 -KLFRETGKPKKPGNSFYLFIKD 167
+ +PKKP +SF LF K+
Sbjct: 170 AAAAADPNRPKKPASSFLLFSKE 192
>gi|16033552|gb|AAL13284.1|AF416953_1 high mobility group protein [Naegleria fowleri]
Length = 209
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+PL+ Y F R +++E++P +K+ EV K V W+K+ + EKK ++ AK K+
Sbjct: 118 PKRPLSSYMLFSQDKRKELLEKDPTLKVTEVAKQVGALWQKMSDEEKKPYNDKAAKLKKE 177
Query: 109 YAQNVKKYHDE 119
Y + VK +DE
Sbjct: 178 Y-EGVKAKYDE 187
>gi|443897201|dbj|GAC74542.1| putative N2 [Pseudozyma antarctica T-34]
Length = 1388
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 76/153 (49%), Gaps = 14/153 (9%)
Query: 36 KQQTSQPLSIPEK---PKKPLTPYFKFQGQIRNKIMERNPN--IKIIEVTKLVSEEWKKI 90
K+ +P ++ + PK+ + + F + KI ++P+ + + V K + + +
Sbjct: 1188 KEDPPKPSALKSRLKPPKQAPSAWQIFFTEELQKIKAQSPDERLNVAHVAKDAGQRYAAL 1247
Query: 91 GEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKK-QKKEKREMKKLFR 149
E++K+ + KE++ Q + + +LTPE I R+E + Q+K + K +
Sbjct: 1248 PESKKQEFHRRSLEAKELWEQEMADWKAKLTPEDI---RQENLYRSAQRKAGKSRKGNLK 1304
Query: 150 ETGKPKKPGNSFYLFIK-----DNIDKKEYEGK 177
+ PKKP ++++LF++ N+ + +EG+
Sbjct: 1305 DPNAPKKPLSAYFLFLRAIRADPNMTQAVFEGE 1337
>gi|146163497|ref|XP_001011529.2| HMG box family protein [Tetrahymena thermophila]
gi|146146042|gb|EAR91284.2| HMG box family protein [Tetrahymena thermophila SB210]
Length = 2400
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKP T Y + + K +++ PN I E+TKL+++EW ++ ++ + K
Sbjct: 2205 PDMPKKPSTAYILYFKNRKEKFLQQYPNFGITEITKLIAKEWSELSREKQIPFLRDAEKA 2264
Query: 106 KEIYAQNVKKY 116
K Y + +K+Y
Sbjct: 2265 KLDYIERMKEY 2275
>gi|410074357|ref|XP_003954761.1| hypothetical protein KAFR_0A01880 [Kazachstania africana CBS 2517]
gi|372461343|emb|CCF55626.1| hypothetical protein KAFR_0A01880 [Kazachstania africana CBS 2517]
Length = 204
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 37/57 (64%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
PK+P + YFK+ IR+ ++ NPN K+ E+ L +++W + + EK+ L +++ +E
Sbjct: 62 PKRPSSAYFKYFMSIRDDLVRENPNAKVTEIAALGAKKWNTLNDFEKQSLRDKFTRE 118
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 55 PYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
PY +F +IR+ I+ NPN+ E+++++S +W + EK++ N+Y
Sbjct: 142 PYVRFTQEIRDSIVRENPNLTFGEISQVISNKWSNLNNTEKEKYVNQY 189
>gi|322794517|gb|EFZ17570.1| hypothetical protein SINV_80020 [Solenopsis invicta]
Length = 322
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
P++PL+ YF F R K+ +NP++ E+TKL++ EW K+ +K+ + ++KE
Sbjct: 77 PRQPLSGYFLFLNDRREKVRNQNPSLTFTEITKLLAAEWSKLPIDQKQHYLDAAEQDKER 136
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKRE 143
Y +++ D EA EK+ ++Q + K+E
Sbjct: 137 YN---REFSDYKQTEAYRLF-NEKQSERQNENKKE 167
>gi|403304557|ref|XP_003942862.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 2
[Saimiri boliviensis boliviensis]
Length = 341
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 55 PYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVK 114
PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +++K
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 115 KYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDKKEY 174
YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D +Y
Sbjct: 62 AYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDPDDY 112
Query: 175 E 175
+
Sbjct: 113 D 113
>gi|291410190|ref|XP_002721383.1| PREDICTED: high-mobility group box 3 [Oryctolagus cuniculus]
Length = 215
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 105 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAKL 164
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 165 KEKYEKDVADY 175
>gi|149238856|ref|XP_001525304.1| hypothetical protein LELG_03232 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450797|gb|EDK45053.1| hypothetical protein LELG_03232 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 235
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 21/137 (15%)
Query: 3 LFKLTTG---VFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLS-----------IPEK 48
+K+ TG T + ++ + + + TAG+K++ +P P
Sbjct: 33 FYKVATGGEEDVTAEQLHEIQEAM--KVAAQATAGVKRELEEPNGETSKKKKKAEKDPNA 90
Query: 49 PKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
PKKPLT YF + IR ++ E PN+ I++ + + + W+ I EK + +N+Y
Sbjct: 91 PKKPLTMYFAYSFDIRKRVAEERKKKNLPNMNAIDMNQTIKDHWESISPEEKAKWKNKYD 150
Query: 104 KEKEIYAQNVKKYHDEL 120
+E + Y KY L
Sbjct: 151 EEMKKYIVEKAKYDQSL 167
>gi|359320333|ref|XP_537622.4| PREDICTED: nucleolar transcription factor 1 [Canis lupus
familiaris]
Length = 552
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 51/77 (66%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTP 122
K+ + +N+ ++ P
Sbjct: 169 KQEFERNLARFRASSLP 185
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 40 SQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLE 99
S+P + EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + +
Sbjct: 186 SEPWWVGEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK 245
Query: 100 NEYAKEKEIYAQNVKK 115
A+E + AQ+ +K
Sbjct: 246 ---AREAALKAQSERK 258
>gi|260798166|ref|XP_002594071.1| hypothetical protein BRAFLDRAFT_68489 [Branchiostoma floridae]
gi|229279304|gb|EEN50082.1| hypothetical protein BRAFLDRAFT_68489 [Branchiostoma floridae]
Length = 1554
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 408 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKKKTEAA 467
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQ 137
K+ Y + + Y L +A + +E KKQ
Sbjct: 468 KKEYLKQLAAYRASLVSQAAVDQAESEEAKKQ 499
>gi|50418158|gb|AAH78230.1| Ubtf protein, partial [Danio rerio]
Length = 455
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ + +K++ ++ +E
Sbjct: 101 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPDRKKEKYVKDFLRE 160
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEV 134
E + ++ K+ E P+ +E + K+ V
Sbjct: 161 NETFMLSMMKFKQE-HPDLLENVNKKSNV 188
>gi|327275441|ref|XP_003222482.1| PREDICTED: nucleolar transcription factor 1-like [Anolis
carolinensis]
Length = 761
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ + +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPDKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQDFERNLARFRED-HPDLIQNAKK 192
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRKQLQEERPELSENELTRLLARMWNDLSEKKKAKYK---ARET 461
Query: 107 EIYAQNVKKY 116
+ AQ KK+
Sbjct: 462 AMKAQTEKKH 471
>gi|114667539|ref|XP_001169953.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 1
[Pan troglodytes]
gi|169793993|gb|ACA81393.1| Smarce1 variant 5 [Homo sapiens]
gi|194376758|dbj|BAG57525.1| unnamed protein product [Homo sapiens]
Length = 341
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 55 PYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVK 114
PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +++K
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 115 KYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDKKEY 174
YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D +Y
Sbjct: 62 AYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDPDDY 112
Query: 175 E 175
+
Sbjct: 113 D 113
>gi|348551110|ref|XP_003461373.1| PREDICTED: high mobility group protein B3-like [Cavia porcellus]
Length = 202
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|354495940|ref|XP_003510086.1| PREDICTED: high mobility group protein B3-like [Cricetulus griseus]
gi|344249016|gb|EGW05120.1| High mobility group protein B3 [Cricetulus griseus]
Length = 200
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|397522853|ref|XP_003831463.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 2
[Pan paniscus]
Length = 341
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 55 PYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVK 114
PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +++K
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 115 KYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDKKEY 174
YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D +Y
Sbjct: 62 AYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDPDDY 112
Query: 175 E 175
+
Sbjct: 113 D 113
>gi|15236607|ref|NP_194111.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266376|sp|Q9SUP7.1|HMGB6_ARATH RecName: Full=High mobility group B protein 6; AltName:
Full=Nucleosome/chromatin assembly factor group D 06;
Short=Nucleosome/chromatin assembly factor group D 6;
AltName: Full=WRKY transcription factor 53;
Short=AtWRKY53; Short=WRKY DNA-binding protein 53
gi|4454049|emb|CAA23046.1| 98b like protein [Arabidopsis thaliana]
gi|7269229|emb|CAB81298.1| 98b like protein [Arabidopsis thaliana]
gi|18377799|gb|AAL67049.1| putative 98b protein [Arabidopsis thaliana]
gi|20465867|gb|AAM20038.1| putative 98b protein [Arabidopsis thaliana]
gi|22022506|gb|AAM83212.1| putative 98b protein [Arabidopsis thaliana]
gi|332659407|gb|AEE84807.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 456
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKKP + YF F R K+ E P VT L+S +WK++ E EK+ + AK
Sbjct: 376 PNKPKKPASSYFLFSKDERKKLTEERPGTNNATVTALISLKWKELSEEEKQVYNGKAAKL 435
Query: 106 KEIYAQNVKKYH 117
E Y + V+ Y+
Sbjct: 436 MEAYKKEVEAYN 447
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 23/143 (16%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK P++ + + + R + E N ++ +EV K+ EEWK + + +K E K
Sbjct: 252 PLKPKHPVSAFLVYANERRAALREENKSV--VEVAKITGEEWKNLSDKKKAPYEKVAKKN 309
Query: 106 KEIYAQNVKKYHDELTPEAI-EFLRKEKEVKKQKKEKREMKKLFRET------------- 151
KE Y Q +++Y EA+ + +E+ +K K+E +M K +T
Sbjct: 310 KETYLQAMEEYKRTKEEEALSQKKEEEELLKLHKQEALQMLKKKEKTDNLIKKEKATKKK 369
Query: 152 -------GKPKKPGNSFYLFIKD 167
KPKKP +S++LF KD
Sbjct: 370 KNENVDPNKPKKPASSYFLFSKD 392
>gi|403305854|ref|XP_003943467.1| PREDICTED: high mobility group protein B3 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|395826458|ref|XP_003786435.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 2
[Otolemur garnettii]
Length = 341
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 55 PYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVK 114
PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +++K
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 115 KYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDKKEY 174
YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D +Y
Sbjct: 62 AYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDPDDY 112
Query: 175 E 175
+
Sbjct: 113 D 113
>gi|395754558|ref|XP_002832281.2| PREDICTED: high mobility group protein B3 isoform 2 [Pongo abelii]
Length = 199
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|295913696|gb|ADG58089.1| transcription factor [Lycoris longituba]
Length = 183
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVT-KLVSEEWKKIGEAEKKRLENEYAK 104
P KPK+P + +F F + R + E+NPN K + V K ++WK + AEK E + AK
Sbjct: 64 PNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAAK 123
Query: 105 EKEIYAQNVKKYHDELTPEA 124
K Y + + Y+ +L A
Sbjct: 124 RKVDYNKTMVAYNKKLADGA 143
>gi|323354109|gb|EGA85955.1| Ixr1p [Saccharomyces cerevisiae VL3]
Length = 455
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKK----RLENEY 102
+ PK+P + YF F IRN+++++ P K+ E++KL S WK++ + +KK R++N+
Sbjct: 366 QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKTILRRIQNQL 425
Query: 103 AK 104
K
Sbjct: 426 GK 427
>gi|70999478|ref|XP_754458.1| nucleosome binding protein (Nhp6a) [Aspergillus fumigatus Af293]
gi|74674416|sp|Q4WY33.1|NHP6_ASPFU RecName: Full=Non-histone chromosomal protein 6
gi|66852095|gb|EAL92420.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
Af293]
gi|159127475|gb|EDP52590.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
A1163]
Length = 104
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F + R+K+ E NP I +V K++ E WK + ++E++ E + A +
Sbjct: 22 PNAPKRGLSAYMFFANENRDKVREENPGISFGQVGKMLGERWKALSDSERRPYEEKAAAD 81
Query: 106 KEIYAQNVKKYH 117
K+ Y Y+
Sbjct: 82 KKRYEDEKASYN 93
>gi|406605137|emb|CCH43430.1| High mobility group protein 1 [Wickerhamomyces ciferrii]
Length = 281
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F + IR + E P + E+T+ +S++W ++GE EK++ +
Sbjct: 135 PNAPKKPLTVFFAYSAYIRQALREERSSKGLPALSSTEITQEISKKWNELGELEKEKWKE 194
Query: 101 EYAKEKEIYAQNVKKY 116
Y +E E Y + +KY
Sbjct: 195 AYNEELETYQRVKEKY 210
>gi|397475678|ref|XP_003809257.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
Length = 165
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F +IR KI NP I + +V K + E W + ++EK+ + AK
Sbjct: 67 PSAPKRPPSGFFLFSSEIRPKIKSTNPGISVGDVAKKLGEMWNNLNDSEKQPYITKAAKL 126
Query: 106 KEIYAQNV 113
KE Y ++V
Sbjct: 127 KEKYEKDV 134
>gi|145347793|ref|XP_001418346.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578575|gb|ABO96639.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 95
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+PL+ Y F R I+++NP+ + +V K + +W K +K + E E AK+
Sbjct: 25 PNAPKRPLSAYMFFAKDQRAAILKKNPSFGVTDVAKALGAQWAKT--TDKSKYEAEAAKD 82
Query: 106 KEIYAQNVKKY 116
K+ Y + KY
Sbjct: 83 KKRYEAAMAKY 93
>gi|440298630|gb|ELP91261.1| HMG (high mobility group) box domain containing protein, partial
[Entamoeba invadens IP1]
Length = 214
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PKKP+TPY F + R + E+ P +KI E+ K +E W+ + E +K+ ++ K
Sbjct: 115 PNLPKKPMTPYLMFLNEHREEFREKFPELKITEIAKKAAEIWRDMKEEDKQVYLDKAKKA 174
Query: 106 KEIYAQNVKKYHD 118
E Y + +K Y++
Sbjct: 175 TEKYLEEMKTYNE 187
>gi|321476164|gb|EFX87125.1| hypothetical protein DAPPUDRAFT_221844 [Daphnia pulex]
Length = 773
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 46/73 (63%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P++PKKPLT Y F + ++ ++E+ P + + E++K++++ + ++ + K + KE
Sbjct: 192 PDQPKKPLTSYMLFYMEQKDAVLEKQPGLGMTELSKIIAKMYHELSDRNKTKYSELAEKE 251
Query: 106 KEIYAQNVKKYHD 118
KE Y + +KK+ D
Sbjct: 252 KEAYQEKMKKFMD 264
>gi|169793995|gb|ACA81394.1| Smarce1 variant 6 [Homo sapiens]
Length = 293
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 55 PYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVK 114
PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +++K
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 115 KYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDKKEY 174
YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D +Y
Sbjct: 62 AYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDPDDY 112
Query: 175 EG 176
+
Sbjct: 113 DD 114
>gi|255713480|ref|XP_002553022.1| KLTH0D06908p [Lachancea thermotolerans]
gi|238934402|emb|CAR22584.1| KLTH0D06908p [Lachancea thermotolerans CBS 6340]
Length = 381
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 34/54 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
PK+P P+ +F ++R +I+ NP +IE+TKL+ E+W+ + +K+ + Y
Sbjct: 302 PKRPSGPFIQFTQEVRPQIIRENPQKDLIEITKLIGEKWRSLSPVDKRTYTDTY 355
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P + YF F +R ++ P+ K+ E++KL S +WK++ + +KK ++ + E
Sbjct: 229 PKRPSSAYFLFSMAVREDLVREYPDAKVPELSKLASAKWKEMSDEDKKPYHVKFKENWEK 288
Query: 109 YAQNVKKYHDELTPE--AIEFLRKEKEVKKQ 137
Y K+Y L P+ + F++ +EV+ Q
Sbjct: 289 YRIARKEYESSLPPKRPSGPFIQFTQEVRPQ 319
>gi|344230465|gb|EGV62350.1| hypothetical protein CANTEDRAFT_115813 [Candida tenuis ATCC 10573]
Length = 232
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT YF + IR +I + P + IE+ V E W K+ EAEK +
Sbjct: 82 PNAPKKPLTMYFAYSFHIREQIRDERKANGLPPLSAIEMNAYVKERWSKLSEAEKSTWQK 141
Query: 101 EYAKEKEIY 109
+Y E ++Y
Sbjct: 142 KYQSELKVY 150
>gi|291403518|ref|XP_002718101.1| PREDICTED: high mobility group box 3-like [Oryctolagus cuniculus]
Length = 197
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + +++K++ + AK
Sbjct: 90 PNAPKRPPSRFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSDKQQYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVTDY 160
>gi|427787117|gb|JAA59010.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 208
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 34 GLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEA 93
G K + + P PK+PL+ +F F R + + NP+ + EV K + W ++G+
Sbjct: 81 GDKSKKRKRAKDPNAPKRPLSAFFWFCNDERPNVRQENPDSSVGEVAKELGRRWNEVGDD 140
Query: 94 EKKRLENEYAKEKEIYAQNVKKY 116
K + E AK+K Y + +K Y
Sbjct: 141 VKAKYEGLAAKDKARYEKELKAY 163
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 20/123 (16%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKII--EVTKLVSEEWKKIGEAEKKRLENEYAK 104
+KP+ ++ Y F R + +++PN ++ E +K +E WK + + EKKR K
Sbjct: 5 DKPRGRMSAYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMSDGEKKRFHQMADK 64
Query: 105 EKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLF 164
+K K++ E+ + K K +K + +K ++ PK+P ++F+ F
Sbjct: 65 DK-------KRFDTEMA-----------DYKPPKGDKSKKRKRAKDPNAPKRPLSAFFWF 106
Query: 165 IKD 167
D
Sbjct: 107 CND 109
>gi|410219302|gb|JAA06870.1| high mobility group box 3 [Pan troglodytes]
Length = 199
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|296236643|ref|XP_002763412.1| PREDICTED: high mobility group protein B3-like [Callithrix jacchus]
Length = 203
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|167773205|gb|ABZ92037.1| high-mobility group box 3 [synthetic construct]
Length = 198
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|109132602|ref|XP_001091672.1| PREDICTED: high mobility group protein B3-like isoform 3 [Macaca
mulatta]
gi|109132606|ref|XP_001091441.1| PREDICTED: high mobility group protein B3-like isoform 1 [Macaca
mulatta]
gi|402911729|ref|XP_003918461.1| PREDICTED: high mobility group protein B3 isoform 1 [Papio anubis]
gi|402911731|ref|XP_003918462.1| PREDICTED: high mobility group protein B3 isoform 2 [Papio anubis]
Length = 201
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|71143137|ref|NP_005333.2| high mobility group protein B3 [Homo sapiens]
gi|426397735|ref|XP_004065062.1| PREDICTED: high mobility group protein B3 isoform 1 [Gorilla
gorilla gorilla]
gi|426397739|ref|XP_004065064.1| PREDICTED: high mobility group protein B3 isoform 3 [Gorilla
gorilla gorilla]
gi|85701353|sp|O15347.4|HMGB3_HUMAN RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|47124341|gb|AAH70482.1| HMGB3 protein [Homo sapiens]
gi|117645316|emb|CAL38124.1| hypothetical protein [synthetic construct]
gi|117646384|emb|CAL38659.1| hypothetical protein [synthetic construct]
gi|119619803|gb|EAW99397.1| high-mobility group box 3, isoform CRA_a [Homo sapiens]
gi|410351655|gb|JAA42431.1| high mobility group box 3 [Pan troglodytes]
gi|410351657|gb|JAA42432.1| high mobility group box 3 [Pan troglodytes]
Length = 200
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|395857208|ref|XP_003800997.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 225
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I + +V K + E W + ++EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISVGDVAKKLGEMWNNLSDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|291242500|ref|XP_002741145.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily e, member 1-like
[Saccoglossus kowalevskii]
Length = 458
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 45/73 (61%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +K+ + NP +K+ E+ K++ + W+++ E EK+ +EY EK Y +
Sbjct: 70 PLMPYMRYSRKVWDKVKQENPELKLWEIGKIIGQMWRELTEDEKQVFIDEYEAEKIDYNE 129
Query: 112 NVKKYHDELTPEA 124
+K YH+ +A
Sbjct: 130 AMKAYHNSAAYQA 142
>gi|449490837|ref|XP_004176325.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar transcription factor
1-like, partial [Taeniopygia guttata]
Length = 734
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 50/71 (70%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKY 116
K+ + +N+ ++
Sbjct: 169 KQEFERNLARF 179
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E P + E+T+L++ W + E +K + + A+E
Sbjct: 416 EKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREA 472
Query: 107 EIYAQNVKKY 116
+ AQ+ KK+
Sbjct: 473 AMKAQSEKKH 482
>gi|71142479|emb|CAH60732.1| transcription factor A [Lemur catta]
Length = 160
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 56/96 (58%)
Query: 70 RNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLR 129
++P+ K+ ++ + ++ W+++ E EKK E ++ + + Y + + K+ D+LTP +
Sbjct: 9 KHPDAKLSDLVRKIAAAWRELPEEEKKVYEADFRADWKAYKEALSKFKDQLTPAQLVSFE 68
Query: 130 KEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
KE K+ KK+ K+ GKPK+P +++ +++
Sbjct: 69 KEVRQKRLKKKASVKKRELMLLGKPKRPRSAYNIYV 104
>gi|410256410|gb|JAA16172.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|356514715|ref|XP_003526049.1| PREDICTED: high mobility group B protein 13-like [Glycine max]
Length = 426
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK P++ Y F R + N N+ +EV K+ S+EWK + E +K+ E K
Sbjct: 203 PLKPKHPMSAYLLFTNDRRAALAAENNNL--LEVPKITSKEWKNMTEEQKRPYEEMAKKN 260
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKE 133
KE YA ++ Y + EA F+++E++
Sbjct: 261 KEQYALQMEAYKQKKDEEAGHFMKEEED 288
>gi|2285963|emb|CAA71143.1| high mobility group protein 2a [Homo sapiens]
Length = 200
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|422294533|gb|EKU21833.1| nucleosome binding protein, partial [Nannochloropsis gaditana
CCMP526]
Length = 195
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F R + P +K+ E++K++ E W+ + EKK E++ A
Sbjct: 34 PNAPKQALSAYMLFTQASREAVKAEQPGLKVTEISKVMGERWRALSAEEKKVFEDQAASA 93
Query: 106 KEIYAQNVKKY 116
K Y + ++ Y
Sbjct: 94 KVRYGEELRAY 104
>gi|241958766|ref|XP_002422102.1| high mobility group (HMG) DNA binding protein, putative [Candida
dubliniensis CD36]
gi|223645447|emb|CAX40103.1| high mobility group (HMG) DNA binding protein, putative [Candida
dubliniensis CD36]
Length = 223
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKI-MERN----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F+F +R +I +ER P++ I++ ++ + W I + EK +
Sbjct: 84 PNAPKKPLTMFFQFSYDLRKRIGIERKKKDLPSLSAIDMNSMIKDRWDSISDVEKAGYKK 143
Query: 101 EYAKEKEIYAQNVKKYHDEL 120
Y +Y KKY D L
Sbjct: 144 RYDDAMIVYNIEKKKYEDSL 163
>gi|367003789|ref|XP_003686628.1| hypothetical protein TPHA_0G03540 [Tetrapisispora phaffii CBS 4417]
gi|357524929|emb|CCE64194.1| hypothetical protein TPHA_0G03540 [Tetrapisispora phaffii CBS 4417]
Length = 452
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P + YF F IRN++++ +P+ K+ E++KL S WK + + +KK +E+
Sbjct: 250 QGPKRPSSAYFLFSMSIRNELLQEHPHAKVPELSKLASIRWKDLTDEQKKPFYDEFRTNW 309
Query: 107 EIY 109
E Y
Sbjct: 310 EKY 312
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 33/54 (61%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
PK+P P+ +F IR +++ NP+ +IE+TK++ E+W+++ +K Y
Sbjct: 325 PKRPSGPFIQFTQDIRPLVVKENPDRNLIEITKIIGEKWRQLDPVKKAEYTENY 378
>gi|440800724|gb|ELR21759.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 128
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P T Y F + R K+ E NP++ ++TK VS +WK + E EK+ K+
Sbjct: 29 PNAPKRPKTGYIFFSAEERVKVKEDNPDLGFGDITKQVSAKWKDMSEEEKEPYLTLAKKD 88
Query: 106 KEIYAQNVKKY 116
KE Y + + KY
Sbjct: 89 KERYEKEMSKY 99
>gi|397568766|gb|EJK46329.1| hypothetical protein THAOC_35006 [Thalassiosira oceanica]
Length = 356
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +PK PLT + F R KI NP+ E++ LV + WK + + E+K+ ++ A E
Sbjct: 280 PNRPKAPLTAFNLFAKSRREKIKTSNPDKNFNEISALVGKAWKALADDERKQFFDDAAAE 339
Query: 106 KEIYAQNVKKYH 117
+ Y + + +Y+
Sbjct: 340 RAEYKEAMTRYN 351
>gi|397466921|ref|XP_003805186.1| PREDICTED: high mobility group protein B3 [Pan paniscus]
gi|410057106|ref|XP_001135676.3| PREDICTED: high mobility group protein B3 isoform 1 [Pan
troglodytes]
gi|426397737|ref|XP_004065063.1| PREDICTED: high mobility group protein B3 isoform 2 [Gorilla
gorilla gorilla]
gi|119619804|gb|EAW99398.1| high-mobility group box 3, isoform CRA_b [Homo sapiens]
Length = 220
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 110 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKL 169
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 170 KEKYEKDVADY 180
>gi|149054158|gb|EDM05975.1| rCG34563, isoform CRA_c [Rattus norvegicus]
Length = 341
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 55 PYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVK 114
PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +++K
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 115 KYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDKKEY 174
YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D +Y
Sbjct: 62 AYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDPDDY 112
Query: 175 E 175
+
Sbjct: 113 D 113
>gi|148694630|gb|EDL26577.1| mCG10155, isoform CRA_d [Mus musculus]
Length = 220
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + + EK+ + AK
Sbjct: 110 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKL 169
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 170 KEKYEKDVADY 180
>gi|148684235|gb|EDL16182.1| mCG15366, isoform CRA_b [Mus musculus]
Length = 341
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 55 PYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVK 114
PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +++K
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 115 KYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDKKEY 174
YH+ +P + ++ + + +E+ ++ E G+P Y+ I+ D +Y
Sbjct: 62 AYHN--SPAYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDPDDY 112
Query: 175 E 175
+
Sbjct: 113 D 113
>gi|367008704|ref|XP_003678853.1| hypothetical protein TDEL_0A03100 [Torulaspora delbrueckii]
gi|359746510|emb|CCE89642.1| hypothetical protein TDEL_0A03100 [Torulaspora delbrueckii]
Length = 438
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P + YF F IRN ++++ P K+ E++KL S +WK++ + +KK E+ E
Sbjct: 290 PKRPSSAYFLFSMSIRNDLLQQYPEAKVPELSKLASAKWKELSDDDKKPYYEEFRTNWEK 349
Query: 109 YAQNVKKYHDELTP 122
Y +Y L P
Sbjct: 350 YRVLRDEYEKTLPP 363
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIG--------EAEKKRL-- 98
PK+P P+ +F +IR+ +++ NP+ +IE+TK++ E+W+ + E KKRL
Sbjct: 363 PKRPSGPFIQFTQEIRSTVVKENPDKNLIEITKMIGEKWRNLDPLKKAEYTETYKKRLKE 422
Query: 99 -ENEYAKEKEI 108
E+ Y E E+
Sbjct: 423 WESCYPDEAEV 433
>gi|189205162|ref|XP_001938916.1| non-histone chromosomal protein 6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330923152|ref|XP_003300124.1| hypothetical protein PTT_11280 [Pyrenophora teres f. teres 0-1]
gi|187986015|gb|EDU51503.1| non-histone chromosomal protein 6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325919|gb|EFQ91802.1| hypothetical protein PTT_11280 [Pyrenophora teres f. teres 0-1]
Length = 106
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F + R K+ E NP IK EV KL+ E+WK + E ++ E + A +
Sbjct: 25 PNAPKRGLSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNEKQRTPYEAKAAAD 84
Query: 106 KEIYAQNVKKYH 117
K+ Y + Y
Sbjct: 85 KKRYEEEKAAYQ 96
>gi|223649078|gb|ACN11297.1| FACT complex subunit SSRP1 [Salmo salar]
Length = 711
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P++ Y + R +I NP I I E++K E WK+IG+ +K+ + + + K+
Sbjct: 543 PKRPMSSYMLWLNSSRERIKSENPGISITEISKKAGEMWKQIGKEDKEEWDGKAEEAKKN 602
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKK 156
Y + +K+Y + + +KE KK+ K+E KK R++G +K
Sbjct: 603 YEKAMKEYRESGGGSSTP---AKKESKKKAGGKKEDKK--RKSGGGEK 645
>gi|115396468|ref|XP_001213873.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
gi|114193442|gb|EAU35142.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
Length = 101
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F + R+K+ E NP I +V K++ E+WK + E +++ E + A +
Sbjct: 20 PNAPKRGLSAYMFFANENRDKVREENPGITFGQVGKMLGEKWKALSEDDRRPYEEKAAAD 79
Query: 106 KEIYAQNVKKYH 117
K+ Y Y+
Sbjct: 80 KKRYEDEKASYN 91
>gi|195123073|ref|XP_002006034.1| GI20809 [Drosophila mojavensis]
gi|193911102|gb|EDW09969.1| GI20809 [Drosophila mojavensis]
Length = 388
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%)
Query: 35 LKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAE 94
LK+ T + +++ PK PL Y +F R ++ +PN +E TK++ EEW ++ +
Sbjct: 50 LKKLTQRRINVAGAPKMPLNSYVRFMNDRREQLRREHPNRTALEHTKMIGEEWHQLTDER 109
Query: 95 KKRLENEYAKEKEIYAQNVKKY 116
K AK+K +Y + + K+
Sbjct: 110 KAPYLEAAAKDKALYQEQMHKF 131
>gi|442755991|gb|JAA70155.1| Putative dorsal switch protein 1 [Ixodes ricinus]
Length = 207
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%)
Query: 34 GLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEA 93
G K + + P PK+PL+ +F F R + + +P+ + EV K + W +G+
Sbjct: 81 GEKSKKRKRTKDPNAPKRPLSAFFWFCNDERPNVRQESPDASVGEVAKELGRRWNDVGDD 140
Query: 94 EKKRLENEYAKEKEIYAQNVKKYHDELT 121
K + E AK+K Y + +K Y ++ T
Sbjct: 141 TKSKYEGLAAKDKARYEKELKAYKNKKT 168
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNP--NIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+KP+ ++ Y F R + +++P N+ E +K +E WK + + EKKR K
Sbjct: 5 DKPRGRMSAYAFFVQTCREEHKKKHPTENVVFAEFSKKCAERWKTMSDGEKKRFHQMADK 64
Query: 105 EKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLF 164
+K+ + + Y K K EK + +K ++ PK+P ++F+ F
Sbjct: 65 DKKRFDSEMADY------------------KPPKGEKSKKRKRTKDPNAPKRPLSAFFWF 106
Query: 165 IKD 167
D
Sbjct: 107 CND 109
>gi|410917315|ref|XP_003972132.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 214
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F R KI E NP I I ++ K + E W G +K E AK
Sbjct: 92 PNAPKRPPSAFFVFCSDHRPKIKEDNPGISIGDIAKKLGELWSTQGPKDKAPYEARAAKL 151
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 152 KEKYEKDVAAY 162
>gi|294463267|gb|ADE77169.1| unknown [Picea sitchensis]
Length = 482
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 37/152 (24%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK P+T +F F + R ++E N N ++++ K++ EEWK + + E+ E A+
Sbjct: 250 PSKPKHPVTAFFAFTNERRAALLEENHN--VLQIAKILGEEWKNMTKEERAPYEQIAAEA 307
Query: 106 KEIYAQNVKKYHDELTPEA------------------IEFLRKEKEVKKQKKE--KREMK 145
KE Y ++ Y + EA ++ LR KK+K E KR MK
Sbjct: 308 KEKYMGEMELYKQKKAEEASSASKEEEELRKLEREQGLQLLR-----KKEKNETLKRTMK 362
Query: 146 KLF----------RETGKPKKPGNSFYLFIKD 167
K + +PKKP SF LF K+
Sbjct: 363 KKLIQKKQLKEKNSDPNRPKKPPTSFLLFSKE 394
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 44 SIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
S P +PKKP T + F + R K+++ P + + L+S +WK +G AEK++ +E A
Sbjct: 376 SDPNRPKKPPTSFLLFSKETRKKLVQERPGVNNTTINALISLKWKDLGTAEKQKWVDEAA 435
Query: 104 KEKEIYAQNVKKYH 117
Y + V++Y+
Sbjct: 436 GAMVQYKKEVEEYN 449
>gi|449505047|ref|XP_004162361.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
13-like [Cucumis sativus]
Length = 500
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKKP + Y F + R +ME P + V L+S +WK++ E E+K ++ A+
Sbjct: 413 PNKPKKPASSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEA 472
Query: 106 KEIYAQNVKKYH 117
E Y + V++Y+
Sbjct: 473 MEGYKKEVEEYN 484
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 29/143 (20%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
+P++ +F F + R ++ N N+ +E+ K+ EEWK + E +K E K KE Y
Sbjct: 290 QPMSAFFLFSNERRASLVAENKNV--VELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYM 347
Query: 111 QNVKKYHDELTPEAIEFLRKEKE--VKKQKKEKREMKKLFRET----------------- 151
Q ++ Y + EA L+KE+E +K QK E + K +T
Sbjct: 348 QEMEIYEQKKEEEAA-ILKKEEEEQMKVQKHEALLLLKKKXKTETIIKKSKEERQKKKKE 406
Query: 152 -------GKPKKPGNSFYLFIKD 167
KPKKP +S+ LF K+
Sbjct: 407 GKNPVDPNKPKKPASSYILFSKE 429
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
+P PY + N+I + NP E + ++ +WK I EKK E +Y EKE Y
Sbjct: 174 RPAPPYILWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYL 233
Query: 111 QNVKKYHDELTPEAIEFLRKEKEVK 135
+ K E EA++ L +E++ K
Sbjct: 234 RITSKEKRE--SEAMKLLEEEQKQK 256
>gi|449464074|ref|XP_004149754.1| PREDICTED: high mobility group B protein 13-like [Cucumis sativus]
Length = 500
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKKP + Y F + R +ME P + V L+S +WK++ E E+K ++ A+
Sbjct: 413 PNKPKKPASSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEA 472
Query: 106 KEIYAQNVKKYH 117
E Y + V++Y+
Sbjct: 473 MEGYKKEVEEYN 484
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 29/143 (20%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
+P++ +F F + R ++ N N+ +E+ K+ EEWK + E +K E K KE Y
Sbjct: 290 QPMSAFFLFSNERRASLVAENKNV--VELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYM 347
Query: 111 QNVKKYHDELTPEAIEFLRKEKE--VKKQKKEKREMKKLFR------------------- 149
Q ++ Y + EA L+KE+E +K QK E + K
Sbjct: 348 QEMEIYEQKKEEEAA-ILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKE 406
Query: 150 -----ETGKPKKPGNSFYLFIKD 167
+ KPKKP +S+ LF K+
Sbjct: 407 GKNPVDPNKPKKPASSYILFSKE 429
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
+P PY + N+I + NP E + ++ +WK I EKK E +Y EKE Y
Sbjct: 174 RPAPPYILWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYL 233
Query: 111 QNVKKYHDELTPEAIEFLRKEKEVK 135
+ K E EA++ L +E++ K
Sbjct: 234 RITSKEKRE--SEAMKLLEEEQKQK 256
>gi|121705796|ref|XP_001271161.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
gi|119399307|gb|EAW09735.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
Length = 104
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F R+K+ E NP I +V K++ E WK + ++E++ E + A +
Sbjct: 22 PNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKMLGERWKALSDSERRPYEEKAATD 81
Query: 106 KEIYAQNVKKYH 117
K+ Y Y+
Sbjct: 82 KKRYEDEKASYN 93
>gi|241122588|ref|XP_002403591.1| DNA-binding protein, putative [Ixodes scapularis]
gi|215493481|gb|EEC03122.1| DNA-binding protein, putative [Ixodes scapularis]
Length = 207
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%)
Query: 34 GLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEA 93
G K + + P PK+PL+ +F F R + + +P+ + EV K + W +G+
Sbjct: 81 GEKSKKRKRTKDPNAPKRPLSAFFWFCNDERPNVRQESPDASVGEVAKELGRRWNDVGDD 140
Query: 94 EKKRLENEYAKEKEIYAQNVKKYHDELT 121
K + E AK+K Y + +K Y ++ T
Sbjct: 141 TKSKYEGLAAKDKARYEKELKAYKNKKT 168
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 20/123 (16%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNP--NIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+KP+ ++ Y F R + +++P N+ E +K +E WK + E EKKR K
Sbjct: 5 DKPRGRMSAYAFFVQTCREEHKKKHPSENVVFAEFSKKCAERWKTMSEGEKKRFHQMADK 64
Query: 105 EKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLF 164
+K K++ E+ + K K EK + +K ++ PK+P ++F+ F
Sbjct: 65 DK-------KRFDSEMA-----------DYKPPKGEKSKKRKRTKDPNAPKRPLSAFFWF 106
Query: 165 IKD 167
D
Sbjct: 107 CND 109
>gi|448527200|ref|XP_003869455.1| Hmo1 transcription factor [Candida orthopsilosis Co 90-125]
gi|380353808|emb|CCG23320.1| Hmo1 transcription factor [Candida orthopsilosis]
Length = 232
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F F +R I E PN+ I++ + V E W I + EK + ++
Sbjct: 86 PNAPKKPLTMFFAFSFHLRKMIAEERKKKGLPNLGAIDLNQRVKERWDNITDEEKAKWKH 145
Query: 101 EYAKEKEIYAQNVKKYHDEL 120
+Y +E ++Y KY L
Sbjct: 146 KYEEEMKLYNAEKAKYEQSL 165
>gi|260794186|ref|XP_002592090.1| hypothetical protein BRAFLDRAFT_84959 [Branchiostoma floridae]
gi|229277305|gb|EEN48101.1| hypothetical protein BRAFLDRAFT_84959 [Branchiostoma floridae]
Length = 565
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 42/66 (63%)
Query: 53 LTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQN 112
L PY +F ++ ++ ++P++K+ E+ K++ + W+ + E +K+ ++Y EK Y +N
Sbjct: 56 LMPYMRFSRKVWEQVKAQHPDLKLWEIGKIIGQMWRDLTEEKKQEYLDDYEAEKIEYNEN 115
Query: 113 VKKYHD 118
+K YH+
Sbjct: 116 MKAYHN 121
>gi|148694627|gb|EDL26574.1| mCG10155, isoform CRA_b [Mus musculus]
Length = 206
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + + EK+ + AK
Sbjct: 96 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKL 155
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 156 KEKYEKDVADY 166
>gi|268573084|ref|XP_002641519.1| Hypothetical protein CBG09815 [Caenorhabditis briggsae]
Length = 329
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 43/72 (59%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ P++PL PY ++ ++ K+ NP+ ++ ++ K+V + W + +AEK ++EY E
Sbjct: 6 PKVPERPLQPYMRYSRKMWPKVRAENPDAQLWDIGKIVGKMWLETTDAEKSFFQHEYEME 65
Query: 106 KEIYAQNVKKYH 117
K Y + +K +
Sbjct: 66 KADYDKQMKNFQ 77
>gi|729731|sp|P40626.1|HMGB_TETTH RecName: Full=High mobility group protein B; AltName:
Full=Non-histone chromosomal protein LG-2
gi|161798|gb|AAA30121.1| high-mobility-group protein B [Tetrahymena thermophila]
Length = 143
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+P KPK+P T +F ++ ++ K P +K+ E+ +SEE+K + E EK++ E Y K
Sbjct: 14 LPSKPKRPQTGFFIYKSEVFAKRRTECPTLKVPEIVSKISEEYKALPEKEKQKYEEAYRK 73
Query: 105 EKEIY 109
EK Y
Sbjct: 74 EKATY 78
>gi|170573143|ref|XP_001892362.1| HMG box family protein [Brugia malayi]
gi|158602158|gb|EDP38809.1| HMG box family protein [Brugia malayi]
Length = 171
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 14/95 (14%)
Query: 6 LTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPL---TPYFKFQGQ 62
+T + +GG V +V +G Q+TS + +KPKK T Y F G+
Sbjct: 8 VTDNLASGGAVCG---------TAVAPSG--QETSSSATPAKKPKKACRARTGYMLFHGE 56
Query: 63 IRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKR 97
R +I +P + +EV+K V EEW K+ EK +
Sbjct: 57 ARKRIRAAHPELNFVEVSKRVGEEWAKVSAEEKNK 91
>gi|91091374|ref|XP_973014.1| PREDICTED: similar to AGAP012335-PA [Tribolium castaneum]
Length = 712
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKE 107
KPK+P T + + ++R+KI NP IKI E+ K E WK++ +K E + AK KE
Sbjct: 552 KPKRPSTAFMLWLNEMRDKIKADNPGIKITEIAKKGGEMWKEL--KDKSEWEGKAAKAKE 609
Query: 108 IYAQNVKKY 116
Y + +K+Y
Sbjct: 610 EYNKAMKEY 618
>gi|45200956|ref|NP_986526.1| AGL141Wp [Ashbya gossypii ATCC 10895]
gi|44985726|gb|AAS54350.1| AGL141Wp [Ashbya gossypii ATCC 10895]
gi|374109772|gb|AEY98677.1| FAGL141Wp [Ashbya gossypii FDAG1]
Length = 252
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F + +R + E P + E+T+ +S++WK++ ++EK + +
Sbjct: 103 PNAPKKPLTVFFAYSAYVRQALREERQRTGLPPLSSTEITQEISKKWKELSDSEKDKWKQ 162
Query: 101 EYAKEKEIYAQNVKKY 116
Y E E Y + +KY
Sbjct: 163 AYTAELENYQREKQKY 178
>gi|6680231|ref|NP_032279.1| high mobility group protein B3 [Mus musculus]
gi|20138160|sp|O54879.3|HMGB3_MOUSE RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|2738989|gb|AAC16925.1| high mobility group protein homolog HMG4 [Mus musculus]
gi|15030059|gb|AAH11276.1| Hmgb3 protein [Mus musculus]
gi|26327985|dbj|BAC27733.1| unnamed protein product [Mus musculus]
gi|54035419|gb|AAH83352.1| High mobility group box 3 [Mus musculus]
gi|74146994|dbj|BAE27437.1| unnamed protein product [Mus musculus]
gi|74186760|dbj|BAE34835.1| unnamed protein product [Mus musculus]
gi|74192972|dbj|BAE34988.1| unnamed protein product [Mus musculus]
gi|74194280|dbj|BAE24671.1| unnamed protein product [Mus musculus]
gi|148694626|gb|EDL26573.1| mCG10155, isoform CRA_a [Mus musculus]
gi|148694628|gb|EDL26575.1| mCG10155, isoform CRA_a [Mus musculus]
gi|187957408|gb|AAI58038.1| High mobility group box 3 [Mus musculus]
Length = 200
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + + EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|295913393|gb|ADG57949.1| transcription factor [Lycoris longituba]
Length = 162
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVT-KLVSEEWKKIGEAEKKRLENEYAK 104
P KPK+P + +F F + R + E+NPN K + V K ++WK + AEK E + AK
Sbjct: 43 PNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAAK 102
Query: 105 EKEIYAQNVKKYHDELT 121
K Y + + Y+ +L
Sbjct: 103 RKVDYNKTMVAYNKKLA 119
>gi|196003770|ref|XP_002111752.1| hypothetical protein TRIADDRAFT_23407 [Trichoplax adhaerens]
gi|190585651|gb|EDV25719.1| hypothetical protein TRIADDRAFT_23407, partial [Trichoplax
adhaerens]
Length = 257
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK P T Y +F R K+ NP++ E+TK++ +W + +EK+R +E K+KE
Sbjct: 16 PKAPHTGYVRFLNDSREKVRAENPDLPFSEITKILGTKWSSLPISEKQRYLDEAEKDKER 75
Query: 109 YAQNVKKY 116
Y + ++ Y
Sbjct: 76 YLKELEDY 83
>gi|355762621|gb|EHH62030.1| hypothetical protein EGM_20207 [Macaca fascicularis]
Length = 201
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVPKKLGEMWNNLNDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|195431784|ref|XP_002063908.1| GK15924 [Drosophila willistoni]
gi|194159993|gb|EDW74894.1| GK15924 [Drosophila willistoni]
Length = 111
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+ +KPK+PL+ Y + R+ I NP IK+ EV K E W+ + +K E + AK
Sbjct: 1 MADKPKRPLSAYMLWLNSARDSIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAK 58
Query: 105 EKEIYAQNVKKYH 117
K+ Y + VK++
Sbjct: 59 AKDDYDRAVKEFE 71
>gi|3600053|gb|AAC35540.1| contains similarity to HMG (high mobility group) box (Pfam:
HMG_box.hmm, scores: 70.67, 53.09 and 80.15)
[Arabidopsis thaliana]
Length = 401
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKKP + YF F R ++E +P I VT +S +W ++GE EK+ ++ A+
Sbjct: 324 PNKPKKPTSSYFLFCKDARKSVLEEHPGINNSTVTAHISLKWMELGEEEKQVYNSKAAEL 383
Query: 106 KEIYAQNVKKYH 117
E Y + V++Y+
Sbjct: 384 MEAYKKEVEEYN 395
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 36/122 (29%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK+P++ Y + + R + + N +IEV K+ EEWK + E +K
Sbjct: 255 PLKPKQPISAYLIYANERRAAL--KGENKSVIEVAKMAGEEWKNLSEEKK---------- 302
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
P + +K KE K KK+ + + KPKKP +S++LF
Sbjct: 303 ---------------AP----YDQKTKETAKNKKKNENV-----DPNKPKKPTSSYFLFC 338
Query: 166 KD 167
KD
Sbjct: 339 KD 340
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIY 109
K+P TPY + N++ ++NP E + ++ +WK I EKK E +Y +KE Y
Sbjct: 142 KRPSTPYILWCKDNWNEVKKQNPEADFKETSNILGAKWKGISAEEKKPYEEKYQADKEAY 201
Query: 110 AQNVKKYHDELTPEAIEFLRKEKEVK 135
Q + K E EA++ L E++ K
Sbjct: 202 LQVITKEKRER--EAMKLLDDEQKQK 225
>gi|148682307|gb|EDL14254.1| mCG114640 [Mus musculus]
Length = 200
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R KI NP I I +V K + E W + + EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|407971018|ref|NP_001238631.1| uncharacterized protein LOC100499704 [Glycine max]
gi|255625939|gb|ACU13314.1| unknown [Glycine max]
Length = 166
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVT-KLVSEEWKKIGEAEKKRLENEYAK 104
P KPK+P + +F F + R NPN+K + V K E+WK + AEK E++ AK
Sbjct: 50 PNKPKRPPSAFFVFLEEFRKTFKAENPNVKAVSVVGKAGGEKWKSLSSAEKAPYESKAAK 109
Query: 105 EKEIYAQNVKKYH 117
K Y + +K Y
Sbjct: 110 RKAEYEKLIKAYD 122
>gi|348542680|ref|XP_003458812.1| PREDICTED: TOX high mobility group box family member 4-like
[Oreochromis niloticus]
Length = 667
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 298 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKNEAA 357
Query: 106 KEIYAQNVKKYHDELTPEA 124
K+ Y + + +Y L +A
Sbjct: 358 KKDYLKALAEYRASLISQA 376
>gi|270014157|gb|EFA10605.1| hypothetical protein TcasGA2_TC012866 [Tribolium castaneum]
Length = 840
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKE 107
KPK+P T + + ++R+KI NP IKI E+ K E WK++ +K E + AK KE
Sbjct: 680 KPKRPSTAFMLWLNEMRDKIKADNPGIKITEIAKKGGEMWKEL--KDKSEWEGKAAKAKE 737
Query: 108 IYAQNVKKY 116
Y + +K+Y
Sbjct: 738 EYNKAMKEY 746
>gi|195429557|ref|XP_002062824.1| GK19656 [Drosophila willistoni]
gi|194158909|gb|EDW73810.1| GK19656 [Drosophila willistoni]
Length = 387
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 35 LKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAE 94
LK+ T + +++ PK PL Y +F R ++ + P +E TK++ EEW ++ E +
Sbjct: 87 LKKLTQRRINVAGAPKMPLNGYVRFMNDRREQLRKEQPQRTALEHTKIIGEEWHQLTEEK 146
Query: 95 KKRLENEYAKEKEIYAQNVK---KYHDELTPEAIEFLRKEKEVKKQKKEKREMK-KLFRE 150
K AK+K IY + ++ K H E+ + + +K +V+ K K ++K K +
Sbjct: 147 KAPYMEAAAKDKAIYQEQLQMFFKEHPEIVAKELVKAKKANKVETTKSSKGDLKMKKQTK 206
Query: 151 TGKPKKPG 158
+G K+P
Sbjct: 207 SGANKRPS 214
>gi|365764630|gb|EHN06152.1| Ixr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 591
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P + YF F IRN+++++ P K+ E++KL S WK++ + +KK E+
Sbjct: 353 QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNW 412
Query: 107 EIYAQNVKKYHDELTPE--AIEFLRKEKEVK 135
E Y Y L P+ + F++ +E++
Sbjct: 413 EKYRVVRDAYEKTLPPKRPSGPFIQFTQEIR 443
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
PK+P P+ +F +IR +++ NP+ +IE+TK++ E W+++ A+K Y K
Sbjct: 428 PKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 483
>gi|311109|gb|AAA02859.1| intrastrand crosslink recognition protein [Saccharomyces
cerevisiae]
Length = 591
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P + YF F IRN+++++ P K+ E++KL S WK++ + +KK E+
Sbjct: 353 QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNW 412
Query: 107 EIYAQNVKKYHDELTPE--AIEFLRKEKEVK 135
E Y Y L P+ + F++ +E++
Sbjct: 413 EKYRVVRDAYEKTLPPKRPSGPFIQFTQEIR 443
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
PK+P P+ +F +IR +++ NP+ +IE+TK++ E W+++ A+K Y K
Sbjct: 428 PKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 483
>gi|301097589|ref|XP_002897889.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106637|gb|EEY64689.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 210
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLE--NEYA 103
P PK+ L+ YF F IR ++ + NPN KI E+ L++E+W+ + + ++ + + NE A
Sbjct: 114 PNAPKRALSAYFFFCNDIRQEVRDENPNKKITEIATLLAEKWRALPDKKRAKYQKMNEEA 173
Query: 104 KEKEIYAQNVKKYH 117
K K Y Q + Y+
Sbjct: 174 KVK--YQQQMDVYN 185
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 47/85 (55%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+ L+ + F IR+ + + P+++ +E++ + WK+I + +++ + A +K
Sbjct: 29 PKRALSAFMFFSNDIRDTVKKEMPDLQFLEISSEIGRRWKQISDEDRRPYDELAAADKRR 88
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKE 133
Y + + Y + + E+ + RK+K+
Sbjct: 89 YQEEKEDYVPDPSFESTKGSRKKKD 113
>gi|56788496|gb|AAW29969.1| unknown [Sus scrofa]
gi|56792880|gb|AAW30632.1| unknown [Sus scrofa]
Length = 193
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%)
Query: 36 KQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK 95
K +T + P PK+P + +F F + R KI +P + I +V K + E W +K
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 96 KRLENEYAKEKEIYAQNVKKYHDELTPEAI 125
+ E AK KE Y +++ Y + P+A
Sbjct: 142 QPYEKXAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 23/122 (18%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPN--IKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
P+KP+ ++ Y F R + +++P+ + E +K SE WK + EK + E+
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 104 KEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYL 163
+K Y + +K Y + P K E KK F++ PK+P ++F+L
Sbjct: 66 ADKARYEREMKTY---IPP------------------KGETKKKFKDPNAPKRPPSAFFL 104
Query: 164 FI 165
F
Sbjct: 105 FC 106
>gi|412985385|emb|CCO18831.1| CG4797 [Bathycoccus prasinos]
Length = 669
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+PL+ Y F ++R K+ E NP+ I +V K + WK + + EK + E K+
Sbjct: 577 PNAPKRPLSTYMIFSAEMRAKVKEENPDFSITDVAKELGVRWKSVTDEEKVKYEELAKKD 636
Query: 106 K 106
K
Sbjct: 637 K 637
>gi|323332798|gb|EGA74203.1| Ixr1p [Saccharomyces cerevisiae AWRI796]
Length = 588
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P + YF F IRN+++++ P K+ E++KL S WK++ + +KK E+
Sbjct: 353 QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNW 412
Query: 107 EIYAQNVKKYHDELTPE--AIEFLRKEKEVK 135
E Y Y L P+ + F++ +E++
Sbjct: 413 EKYRVVRDAYEKTLPPKRPSGPFIQFTQEIR 443
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
PK+P P+ +F +IR +++ NP+ +IE+TK++ E W+++ A+K Y K
Sbjct: 428 PKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 483
>gi|207343448|gb|EDZ70902.1| YKL032Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 589
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P + YF F IRN+++++ P K+ E++KL S WK++ + +KK E+
Sbjct: 353 QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNW 412
Query: 107 EIYAQNVKKYHDELTPE--AIEFLRKEKEVK 135
E Y Y L P+ + F++ +E++
Sbjct: 413 EKYRVVRDAYEKTLPPKRPSGPFIQFTQEIR 443
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
PK+P P+ +F +IR +++ NP+ +IE+TK++ E W+++ A+K Y K
Sbjct: 428 PKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 483
>gi|115459940|ref|NP_001053570.1| Os04g0564600 [Oryza sativa Japonica Group]
gi|38345400|emb|CAE03091.2| OSJNBa0017B10.6 [Oryza sativa Japonica Group]
gi|113565141|dbj|BAF15484.1| Os04g0564600 [Oryza sativa Japonica Group]
gi|116309704|emb|CAH66751.1| H0409D10.9 [Oryza sativa Indica Group]
gi|116309707|emb|CAH66753.1| OSIGBa0158F05.2 [Oryza sativa Indica Group]
gi|125549359|gb|EAY95181.1| hypothetical protein OsI_16998 [Oryza sativa Indica Group]
gi|149391231|gb|ABR25633.1| hmg1/2-like protein [Oryza sativa Indica Group]
gi|213959192|gb|ACJ54930.1| HMG protein [Oryza sativa Japonica Group]
gi|215767864|dbj|BAH00093.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629376|gb|EEE61508.1| hypothetical protein OsJ_15798 [Oryza sativa Japonica Group]
gi|323388963|gb|ADX60286.1| HMG transcription factor [Oryza sativa Japonica Group]
Length = 132
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPNIK-IIEVTKLVSEEWKKIGEAEK 95
KPK+ LTP+F F + R + ME++PN K + VTK E+W+ + + EK
Sbjct: 24 KPKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAGEKWRAMSDEEK 72
>gi|323347802|gb|EGA82066.1| Ixr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 592
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P + YF F IRN+++++ P K+ E++KL S WK++ + +KK E+
Sbjct: 354 QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNW 413
Query: 107 EIYAQNVKKYHDELTPE--AIEFLRKEKEVK 135
E Y Y L P+ + F++ +E++
Sbjct: 414 EKYRVVRDAYEKTLPPKRPSGPFIQFTQEIR 444
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
PK+P P+ +F +IR +++ NP+ +IE+TK++ E W+++ A+K Y K
Sbjct: 429 PKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 484
>gi|256272450|gb|EEU07431.1| Ixr1p [Saccharomyces cerevisiae JAY291]
Length = 583
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P + YF F IRN+++++ P K+ E++KL S WK++ + +KK E+
Sbjct: 344 QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNW 403
Query: 107 EIYAQNVKKYHDELTPE--AIEFLRKEKEVK 135
E Y Y L P+ + F++ +E++
Sbjct: 404 EKYRVVRDAYEKTLPPKRPSGPFIQFTQEIR 434
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
PK+P P+ +F +IR +++ NP+ +IE+TK++ E W+++ A+K Y K
Sbjct: 419 PKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 474
>gi|348534365|ref|XP_003454672.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like, partial
[Oreochromis niloticus]
Length = 424
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 42/67 (62%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ N+Y EK Y +
Sbjct: 66 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNDYEAEKIEYNE 125
Query: 112 NVKKYHD 118
++K YH+
Sbjct: 126 SMKAYHN 132
>gi|151941513|gb|EDN59876.1| intrastrand crosslink recognition protein [Saccharomyces cerevisiae
YJM789]
Length = 597
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P + YF F IRN+++++ P K+ E++KL S WK++ + +KK E+
Sbjct: 359 QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNW 418
Query: 107 EIYAQNVKKYHDELTPE--AIEFLRKEKEVK 135
E Y Y L P+ + F++ +E++
Sbjct: 419 EKYRVVRDAYEKTLPPKRPSGPFIQFTQEIR 449
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
PK+P P+ +F +IR +++ NP+ +IE+TK++ E W+++ A+K Y K
Sbjct: 434 PKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 489
>gi|398364635|ref|NP_012893.3| Ixr1p [Saccharomyces cerevisiae S288c]
gi|547746|sp|P33417.2|IXR1_YEAST RecName: Full=Intrastrand cross-link recognition protein; AltName:
Full=Structure-specific recognition protein; Short=SSRP
gi|486034|emb|CAA81867.1| IXR1 [Saccharomyces cerevisiae]
gi|4467991|emb|CAB37853.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285813227|tpg|DAA09124.1| TPA: Ixr1p [Saccharomyces cerevisiae S288c]
gi|392298106|gb|EIW09204.1| Ixr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 597
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P + YF F IRN+++++ P K+ E++KL S WK++ + +KK E+
Sbjct: 359 QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNW 418
Query: 107 EIYAQNVKKYHDELTPE--AIEFLRKEKEVK 135
E Y Y L P+ + F++ +E++
Sbjct: 419 EKYRVVRDAYEKTLPPKRPSGPFIQFTQEIR 449
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
PK+P P+ +F +IR +++ NP+ +IE+TK++ E W+++ A+K Y K
Sbjct: 434 PKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 489
>gi|349579530|dbj|GAA24692.1| K7_Ixr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 598
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P + YF F IRN+++++ P K+ E++KL S WK++ + +KK E+
Sbjct: 360 QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNW 419
Query: 107 EIYAQNVKKYHDELTPE--AIEFLRKEKEVK 135
E Y Y L P+ + F++ +E++
Sbjct: 420 EKYRVVRDAYEKTLPPKRPSGPFIQFTQEIR 450
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
PK+P P+ +F +IR +++ NP+ +IE+TK++ E W+++ A+K Y K
Sbjct: 435 PKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 490
>gi|259147804|emb|CAY81054.1| Ixr1p [Saccharomyces cerevisiae EC1118]
Length = 598
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P + YF F IRN+++++ P K+ E++KL S WK++ + +KK E+
Sbjct: 360 QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNW 419
Query: 107 EIYAQNVKKYHDELTPE--AIEFLRKEKEVK 135
E Y Y L P+ + F++ +E++
Sbjct: 420 EKYRVVRDAYEKTLPPKRPSGPFIQFTQEIR 450
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
PK+P P+ +F +IR +++ NP+ +IE+TK++ E W+++ A+K Y K
Sbjct: 435 PKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 490
>gi|156360989|ref|XP_001625304.1| predicted protein [Nematostella vectensis]
gi|156212131|gb|EDO33204.1| predicted protein [Nematostella vectensis]
Length = 315
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 33 AGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGE 92
A +T +P P +PK PLT YF++ + R K+ ++ PN+K E+ +S++W+K+ E
Sbjct: 126 ANRSPKTPKPFVDPNQPKMPLTSYFRYCQKHRAKLAKKYPNLKSTELAAKLSKKWRKMSE 185
Query: 93 AEKK 96
KK
Sbjct: 186 ERKK 189
>gi|355705241|gb|EHH31166.1| hypothetical protein EGK_21042 [Macaca mulatta]
Length = 200
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R K+ NP I I +V K + E W + ++EK+ + AK
Sbjct: 90 PNAPKRPPSGFFLFCSEFRPKLKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|340373479|ref|XP_003385269.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like
[Amphimedon queenslandica]
Length = 290
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIM-ERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
L P+ P+KPL PY ++ ++ ++K+ EV K++ ++W+++ + +K+ +E
Sbjct: 27 LKPPKAPEKPLLPYMRYSRKMWEHFKKSEGTDLKVWEVGKIIGQKWRELSDEDKQPYFDE 86
Query: 102 YAKEKEIYAQNVKKY 116
Y EK +Y +N+K Y
Sbjct: 87 YEAEKVVYDENMKAY 101
>gi|295913307|gb|ADG57910.1| transcription factor [Lycoris longituba]
Length = 138
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVT-KLVSEEWKKIGEAEKKRLENEYAK 104
P KPK+P + +F F + R + E+NPN K + V K ++WK + AEK E + AK
Sbjct: 19 PNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAAK 78
Query: 105 EKEIYAQNVKKYHDELTPEA 124
K Y + + Y+ +L A
Sbjct: 79 RKVDYNKTMVAYNKKLADGA 98
>gi|432921036|ref|XP_004080022.1| PREDICTED: LOW QUALITY PROTEIN: TOX high mobility group box family
member 4-B-like [Oryzias latipes]
Length = 644
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 297 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKNEAA 356
Query: 106 KEIYAQNVKKYHD 118
K+ Y + + +Y D
Sbjct: 357 KKDYFKALAEYRD 369
>gi|8886929|gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana]
Length = 662
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 36/158 (22%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNP-NIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
P KPK+P + +F F R + NP N + V K ++WK + ++EK + K
Sbjct: 412 PNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEK 471
Query: 105 EKEIYAQNVKKYH---------DELTPEAIEFLRKEKEVK--------------KQKKEK 141
K Y +N+K Y+ DE + +++ + E + + K K E
Sbjct: 472 RKVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEEVSESIMKGAKSKAET 531
Query: 142 RE------------MKKLFRETGKPKKPGNSFYLFIKD 167
R K ++ KPK+P ++F++F++D
Sbjct: 532 RSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMED 569
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNP-NIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
P KPK+P + +F F R E +P N + V K E+WK + ++EK + K
Sbjct: 553 PNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADK 612
Query: 105 EKEIYAQNVKKYHDEL 120
K Y +N+K Y+ +L
Sbjct: 613 RKVEYEKNMKAYNKKL 628
>gi|195025636|ref|XP_001986096.1| GH20725 [Drosophila grimshawi]
gi|193902096|gb|EDW00963.1| GH20725 [Drosophila grimshawi]
Length = 413
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%)
Query: 33 AGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGE 92
A LK+ T + +++ PK PL Y +F R ++ PN +E TK++ EEW + E
Sbjct: 81 AELKKLTHRRINVAGAPKMPLNAYVRFMNDRREELRREYPNRSALEHTKMIGEEWHLLTE 140
Query: 93 AEKKRLENEYAKEKEIYAQNVKKY 116
K AK+K +Y + + K+
Sbjct: 141 ERKGAYMEAAAKDKALYQEQMHKF 164
>gi|171848939|pdb|2YQI|A Chain A, Solution Structure Of The Second Hmg-Box Domain From High
Mobility Group Protein B3
Length = 81
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK KE
Sbjct: 10 PKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEK 69
Query: 109 YAQNVKKY 116
Y ++V Y
Sbjct: 70 YEKDVADY 77
>gi|358060355|dbj|GAA93760.1| hypothetical protein E5Q_00406 [Mixia osmundae IAM 14324]
Length = 119
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+PL+ Y + R ++ E NP+ E+ K++ +WK + E+EKK+ + ++
Sbjct: 44 PNAPKRPLSAYMFYSQDKRTQVKEDNPDASFGELGKILGAQWKDLDESEKKQYNDMATRD 103
Query: 106 KEIY 109
KE Y
Sbjct: 104 KERY 107
>gi|1045010|gb|AAB38419.1| putative [Cricetulus griseus]
Length = 727
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPY +F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYLRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E+ P + E+T+L++ W + E +K + + A+E
Sbjct: 368 EKPKRPVSAMFIFSEEKRRQLQEQRPELSESELTRLLARMWNDLSEKKKAKYK---AREA 424
Query: 107 EIYAQN 112
+ AQ+
Sbjct: 425 ALKAQS 430
>gi|384496847|gb|EIE87338.1| hypothetical protein RO3G_12049 [Rhizopus delemar RA 99-880]
Length = 157
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y + +R K++ +P++K IE+ K V E W K+ E EK + KE
Sbjct: 43 PNAPKRNLSSYMLYTQAVRPKVVAEHPDMKAIEIAKFVGEMWNKLSEKEKMPYVKQAQKE 102
Query: 106 KEIYAQNVKKYHDELT 121
K + + Y D L
Sbjct: 103 KVRFEKENASYKDSLV 118
>gi|50307729|ref|XP_453858.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642992|emb|CAH00954.1| KLLA0D18029p [Kluyveromyces lactis]
Length = 244
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F + +R + + P + E+T+ +S++WK +G++EK + +
Sbjct: 103 PYAPKKPLTVFFAYSAYVRQALRDERQRAGLPPLSSTEITQEISKKWKDLGDSEKDKWKQ 162
Query: 101 EYAKEKEIYAQNVKKY 116
Y E E Y + +KY
Sbjct: 163 AYNAELENYQREKQKY 178
>gi|303289769|ref|XP_003064172.1| high mobility group family B protein [Micromonas pusilla CCMP1545]
gi|226454488|gb|EEH51794.1| high mobility group family B protein [Micromonas pusilla CCMP1545]
Length = 258
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
++ P KPK P Y F R KI P +K E+ K + E+WK + + + +
Sbjct: 81 VTDPNKPKGPKGAYMCFVQIARPKINASQPGLKFAEIAKQLGEQWKSMDAPTRAKYDKLA 140
Query: 103 AKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKK 136
+K YA+++ Y + ++ LRKEK+ KK
Sbjct: 141 EDDKLRYARDIAAYV-PMDAAGLDQLRKEKQAKK 173
>gi|145486884|ref|XP_001429448.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124396540|emb|CAK62050.1| unnamed protein product [Paramecium tetraurelia]
Length = 113
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK 95
PKKPL+ YF F G R++IM+ NP KI E+T++ + W ++ E K
Sbjct: 13 PKKPLSAYFLFLGDERHEIMKNNPGSKISEITQIAARMWAELDEQRK 59
>gi|213959194|gb|ACJ54931.1| HMG protein [Oryza sativa Japonica Group]
Length = 131
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPNIK-IIEVTKLVSEEWKKIGEAEK 95
KPK+ LTP+F F + R + ME++PN K + VTK E+W+ + + EK
Sbjct: 24 KPKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAGEKWRAMSDEEK 72
>gi|254579665|ref|XP_002495818.1| ZYRO0C03718p [Zygosaccharomyces rouxii]
gi|238938709|emb|CAR26885.1| ZYRO0C03718p [Zygosaccharomyces rouxii]
Length = 249
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F + +R ++ ++ P + E+T+ +S++WK++ +AEK++ +
Sbjct: 107 PNAPKKPLTVFFAYSAFVRQELRDQRQRAGLPPLSSTEITQEISKKWKELSDAEKEKWKQ 166
Query: 101 EYAKEKEIYAQNVKKY 116
Y+ E E Y +KY
Sbjct: 167 AYSVELEHYQMEKQKY 182
>gi|157138017|ref|XP_001664121.1| hypothetical protein AaeL_AAEL013914 [Aedes aegypti]
gi|108869587|gb|EAT33812.1| AAEL013914-PA [Aedes aegypti]
Length = 308
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 11/73 (15%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGE---------AEKKRLE 99
PK PLT Y ++ + R+ I ++P++ +E+TKL++EEW + + AE R+
Sbjct: 63 PKHPLTGYVRYMNEKRDAIRLKHPSLSAVEITKLLAEEWGTLSDEVKKPFLEAAEADRV- 121
Query: 100 NEYAKEKEIYAQN 112
Y +E +Y QN
Sbjct: 122 -RYHREVTVYKQN 133
>gi|345842535|ref|NP_001230942.1| nucleolar transcription factor 1 [Cricetulus griseus]
gi|1045008|gb|AAB38418.1| putative [Cricetulus griseus]
Length = 764
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPY +F + R K + +P + +++TK++S+++K++ E +K + ++ +E
Sbjct: 109 PDFPKKPLTPYLRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQRE 168
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK 130
K+ + +N+ ++ ++ P+ I+ +K
Sbjct: 169 KQEFERNLARFRED-HPDLIQNAKK 192
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
EKPK+P++ F F + R ++ E+ P + E+T+L++ W + E +K + + A+E
Sbjct: 405 EKPKRPVSAMFIFSEEKRRQLQEQRPELSESELTRLLARMWNDLSEKKKAKYK---AREA 461
Query: 107 EIYAQN 112
+ AQ+
Sbjct: 462 ALKAQS 467
>gi|392592827|gb|EIW82153.1| hypothetical protein CONPUDRAFT_122772 [Coniophora puteana
RWD-64-598 SS2]
Length = 341
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKK--RLENEYA 103
P PK+P + Y FQ Q+R+K NPN+ ++ +L+S++W + + EK+ + + E A
Sbjct: 167 PNAPKRPASAYLLFQNQVRSKYKTANPNLPQSDLLQLISQQWSNMPQEEKQVYQRQAETA 226
Query: 104 KEK 106
KEK
Sbjct: 227 KEK 229
>gi|157109478|ref|XP_001650689.1| hypothetical protein AaeL_AAEL005309 [Aedes aegypti]
gi|108879019|gb|EAT43244.1| AAEL005309-PA [Aedes aegypti]
Length = 308
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 11/73 (15%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGE---------AEKKRLE 99
PK PLT Y ++ + R+ I ++P++ +E+TKL++EEW + + AE R+
Sbjct: 63 PKHPLTGYVRYMNEKRDAIRLKHPSLSAVEITKLLAEEWGTLSDEVKKPFLEAAEADRV- 121
Query: 100 NEYAKEKEIYAQN 112
Y +E +Y QN
Sbjct: 122 -RYHREVTVYKQN 133
>gi|355693103|gb|EHH27706.1| hypothetical protein EGK_17974, partial [Macaca mulatta]
Length = 621
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KP+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNKPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|449670744|ref|XP_002158984.2| PREDICTED: high mobility group protein 20A-like [Hydra
magnipapillata]
Length = 312
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK PLT Y ++ + R K NP++ EVTK++ ++W + ++EK++ E K+KE
Sbjct: 53 PKAPLTGYVRYLNEHREKFRIENPDMPFHEVTKILGQKWSSLDQSEKQQYLYEAEKDKEK 112
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPK 155
Y + ++ Y ++ K+ +K+KR+ +TGK K
Sbjct: 113 YMKALQGY------------QQSSAYKEFQKKKRQEADFLNDTGKVK 147
>gi|444322536|ref|XP_004181909.1| hypothetical protein TBLA_0H01020 [Tetrapisispora blattae CBS 6284]
gi|387514955|emb|CCH62390.1| hypothetical protein TBLA_0H01020 [Tetrapisispora blattae CBS 6284]
Length = 248
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F + IR+KI E P + E+T+ +S++WK + E EK + ++
Sbjct: 114 PNAPKKPLTVFFAYSAYIRSKIREERALEGLPPLSPTEITQEISKKWKGLDEKEKSKWKD 173
Query: 101 EYAKEKEIYAQNVKKY 116
Y E + Y KY
Sbjct: 174 AYHIELQNYLAEKNKY 189
>gi|119491564|ref|XP_001263303.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
gi|119411463|gb|EAW21406.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
Length = 104
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F + R+K+ E NP I +V K++ E WK + + +++ E + A +
Sbjct: 22 PNAPKRGLSAYMFFANENRDKVREENPGISFGQVGKMLGERWKALSDTDRRPYEEKAAAD 81
Query: 106 KEIYAQNVKKYH 117
K+ Y Y+
Sbjct: 82 KKRYEDEKASYN 93
>gi|426252207|ref|XP_004019807.1| PREDICTED: putative upstream-binding factor 1-like protein 3/5-like
[Ovis aries]
Length = 463
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 20/146 (13%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLT Y +F ++R + +++ P + E+TK++SEE++K+ E K + ++ KE
Sbjct: 154 PDLPKKPLTAYLRFFKEMRPQYLQKYPKMSNQELTKILSEEYRKLPEQLKLKYSQDFQKE 213
Query: 106 KEIYAQNVKKY---HDEL--------TPEAIE------FLRKEKEVKKQKKEKREMKKLF 148
K+ + + + + H EL P+ + F + VK + MK F
Sbjct: 214 KQEFQEKMALFRTQHPELVQNSKKPDVPKGSQSKVPKKFQENVQRVKHPPENNLAMKWKF 273
Query: 149 RETGKPKKPG-NSFYLFIKDNIDKKE 173
G+PKKP N ++ F +D +E
Sbjct: 274 H--GEPKKPPMNGYHKFHQDLWSSRE 297
>gi|401624856|gb|EJS42895.1| ixr1p [Saccharomyces arboricola H-6]
Length = 613
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+ PK+P + YF F IRN+++++ P K+ E++KL S WK++ + +KK E+
Sbjct: 375 QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNW 434
Query: 107 EIYAQNVKKYHDELTPE--AIEFLRKEKEVK 135
E Y Y L P+ + F++ +E++
Sbjct: 435 EKYRVVRDAYEKTLPPKRPSGPFIQFTQEIR 465
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
PK+P P+ +F +IR +++ NP+ +IE+TK++ E W+++ A+K Y K
Sbjct: 450 PKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 505
>gi|449455609|ref|XP_004145545.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449511984|ref|XP_004164108.1| PREDICTED: HMG1/2-like protein-like isoform 1 [Cucumis sativus]
gi|449511988|ref|XP_004164109.1| PREDICTED: HMG1/2-like protein-like isoform 2 [Cucumis sativus]
Length = 146
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIE-VTKLVSEEWKKIGEAEKKRLENEYAK 104
P KPK+P + +F F + R K E NPN K + V K ++WK + +AEK + K
Sbjct: 36 PNKPKRPASAFFVFMEEFRKKFNEENPNNKAVSAVGKAAGQKWKSMSDAEKAPYIAKADK 95
Query: 105 EKEIYAQNVKKYH 117
K Y +N+K Y+
Sbjct: 96 RKVEYEKNMKAYN 108
>gi|403347541|gb|EJY73196.1| hypothetical protein OXYTRI_05674 [Oxytricha trifallax]
Length = 710
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAE 94
EKPKKPLTPY F + R K++ NPNI +++ K V W+ I + E
Sbjct: 224 EKPKKPLTPYMLFVRETRPKVVRENPNIASLDIMKEVGRIWQNITKDE 271
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 22/122 (18%)
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK--- 106
+KP + Y F R+ IM +NP IK+ EV K +++ W+ + + EK R ++ + K
Sbjct: 136 RKPQSAYVIFGKMKRDLIMRQNPGIKVTEVVKQIAKLWQALSKEEKLRYKDRAKQGKFEF 195
Query: 107 -EIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
++ +QN+ + KE+ + +E RE+ K + KPKKP + LF+
Sbjct: 196 YDVSSQNI--------------IDKERYI----QELRELTKSNKNLEKPKKPLTPYMLFV 237
Query: 166 KD 167
++
Sbjct: 238 RE 239
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKE 107
+PKKPL+ Y F + R K+ E++P E+ + VS +W+ + +K A +K
Sbjct: 405 RPKKPLSAYIYFSQEFREKLKEQHPEWSSNEIMRHVSNKWQHMDRQQKDPYNQMAALDKS 464
Query: 108 IY 109
Y
Sbjct: 465 RY 466
>gi|355568638|gb|EHH24919.1| BRG1-associated factor 57 [Macaca mulatta]
Length = 393
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ W+ + + EK+ NEY EK Y +
Sbjct: 51 PLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNE 110
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNIDK 171
++K Y + +P + ++ + + +E+ ++ E G+P Y+ I+ D
Sbjct: 111 SMKAYRN--SPMYLAYINAKSRAEAALEEESRQRQSRMEKGEP-------YMSIQPAEDP 161
Query: 172 KEYE 175
+Y+
Sbjct: 162 DDYD 165
>gi|302851253|ref|XP_002957151.1| hypothetical protein VOLCADRAFT_77427 [Volvox carteri f.
nagariensis]
gi|300257558|gb|EFJ41805.1| hypothetical protein VOLCADRAFT_77427 [Volvox carteri f.
nagariensis]
Length = 94
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PKKPL Y F +R ++ NP + + ++ K + E WK++ E +KK+ + +
Sbjct: 21 PNAPKKPLGAYMWFCKDMRERVKAENPGMSVTDIGKRLGELWKEVSEEDKKKYLKQAEDD 80
Query: 106 KEIYAQNVKKYHDE 119
KE Y + Y+ E
Sbjct: 81 KERYNKEAAAYNKE 94
>gi|427777853|gb|JAA54378.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 290
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
L+ PK+P + + F R +++ NP + EV K V+ +WK + + N+Y
Sbjct: 80 LTXXXXPKRPPSGFILFAADTRKTVLKENPALTPTEVIKAVAGKWKTADDVTR----NKY 135
Query: 103 ---AKEK-EIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPG 158
A+E+ E Y + Y +LT + E L + + KK K KR + +E KPK
Sbjct: 136 AALARERFEQYEKEKAAYTSQLTEQQREALEEVRLDKKLKITKRRLNDKLKELDKPKAAQ 195
Query: 159 NSFYLF 164
+++ LF
Sbjct: 196 SAYVLF 201
>gi|351715334|gb|EHB18253.1| High mobility group protein B3, partial [Heterocephalus glaber]
Length = 151
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 41 PNAPKRPPPGFFLFFSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAKL 100
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 101 KEKYEKDVADY 111
>gi|341895565|gb|EGT51500.1| hypothetical protein CAEBREN_31697 [Caenorhabditis brenneri]
Length = 2020
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 28 NSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEW 87
N TA S PL P K K + Y F ++R +IM NP+ EV+K+V EW
Sbjct: 1524 NPPGTASDAAPGSTPLMTP-KAVKSKSGYILFSAEVRKRIMHENPDAGFGEVSKIVGIEW 1582
Query: 88 KKIGEAEKKRLE 99
KK+ E +KK E
Sbjct: 1583 KKLSEEQKKHYE 1594
>gi|427793709|gb|JAA62306.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 640
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 38/76 (50%)
Query: 41 QPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
+P KPK+P T + F G R ++ + P + + KL E W+ + E +K+
Sbjct: 286 KPARDANKPKRPGTAFMLFMGDFRKEMAGKEPEGGVAALAKLGGERWRSMSEEDKRPYVE 345
Query: 101 EYAKEKEIYAQNVKKY 116
+EK Y QN+++Y
Sbjct: 346 RQNEEKMKYEQNMEEY 361
>gi|407040433|gb|EKE40132.1| HMG (high mobility group) box domain containing protein
[Entamoeba nuttalli P19]
gi|449710647|gb|EMD49684.1| HMG (high mobility group) box domain containing protein, putative
[Entamoeba histolytica KU27]
Length = 89
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKR 97
K+PL+ YF + +R ++E NP +K E+ K++ E+WK + + EKK+
Sbjct: 21 KRPLSAYFLYSKDVRKSVVEANPTLKNTEIMKIIGEKWKGLSDQEKKK 68
>gi|296200444|ref|XP_002747606.1| PREDICTED: high mobility group protein B1-like isoform 2
[Callithrix jacchus]
Length = 210
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%)
Query: 36 KQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK 95
K +T + P PK+P + +F F + R KI +P + I +V K + E W +K
Sbjct: 82 KGETKKKFKDPSAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 96 KRLENEYAKEKEIYAQNVKKYHDELTPEAI 125
+ E + +K KE Y +++ Y + P+A
Sbjct: 142 QPYEKKASKLKEKYEKDIAAYQAKGKPDAA 171
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 23/122 (18%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPN--IKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
P+K + ++ Y F R + +++P+ + E +K SE WK + EK + E+
Sbjct: 6 PKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 104 KEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYL 163
+K Y + +K Y + P K E KK F++ PK+P ++F+L
Sbjct: 66 ADKVRYEREMKTY---IPP------------------KGETKKKFKDPSAPKRPPSAFFL 104
Query: 164 FI 165
F
Sbjct: 105 FC 106
>gi|295913708|gb|ADG58095.1| transcription factor [Lycoris longituba]
Length = 190
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVT-KLVSEEWKKIGEAEKKRLENEYAK 104
P KPK+P + +F F + R + E+NPN K + V K ++WK + EK E + AK
Sbjct: 71 PNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAAK 130
Query: 105 EKEIYAQNVKKYHDELT 121
K Y + + Y+ +L
Sbjct: 131 RKAEYNKTMVAYNKKLA 147
>gi|449706836|gb|EMD46596.1| HMG (high mobility group) box domain containing protein, putative
[Entamoeba histolytica KU27]
Length = 80
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWK 88
P +PK+P TPYF + + R I E +P+I+ E++K+ SE+WK
Sbjct: 26 PNRPKRPPTPYFIYLNEHRASIKEEHPDIRFTEISKVASEQWK 68
>gi|29825377|gb|AAO92280.1| putative HMG-like protein [Dermacentor variabilis]
Length = 208
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%)
Query: 34 GLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEA 93
G K + + P PK+PL+ +F F R + + +P+ + EV K + W ++G+
Sbjct: 81 GDKSKKRKRAKDPNAPKRPLSAFFWFCNDERPNVRQESPDASVGEVAKELGRRWNEVGDD 140
Query: 94 EKKRLENEYAKEKEIYAQNVKKY 116
K + E AK+K Y + +K Y
Sbjct: 141 VKSKYEGLAAKDKARYEKELKAY 163
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKII--EVTKLVSEEWKKIGEAEKKRLENEYAK 104
+KP+ ++ Y F R + +++PN ++ E +K +E WK + E+EKKR K
Sbjct: 5 DKPRGRMSAYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMSESEKKRFHQMADK 64
Query: 105 EKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLF 164
+K K++ E+ + K K +K + +K ++ PK+P ++F+ F
Sbjct: 65 DK-------KRFDTEMA-----------DYKPPKGDKSKKRKRAKDPNAPKRPLSAFFWF 106
Query: 165 IKD 167
D
Sbjct: 107 CND 109
>gi|397640872|gb|EJK74364.1| hypothetical protein THAOC_03961 [Thalassiosira oceanica]
Length = 1104
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 39/73 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ + +F + RN + E NP K ++ K++S +K + E+ +N+ A++
Sbjct: 1028 PNAPKRNQSAFFLYSNATRNDVKEANPEAKFGDIAKIISTHFKALPVEERAYWDNKAAED 1087
Query: 106 KEIYAQNVKKYHD 118
K Y Q ++ Y +
Sbjct: 1088 KARYQQQLQMYKE 1100
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 54 TPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNV 113
+ +F + RN++ NP+ K ++ KL+S E+K + E E+ + + A++KE Y + +
Sbjct: 947 SAFFLYSNANRNRVKAENPDAKFGDIAKLISVEFKALSEHERAKWDKLAAEDKERYQREM 1006
Query: 114 KKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLF 164
+ Y P +E KR+ KK + PK+ ++F+L+
Sbjct: 1007 EDYE---PPSDLE----------DDAPKRKAKK---DPNAPKRNQSAFFLY 1041
>gi|26353080|dbj|BAC40170.1| unnamed protein product [Mus musculus]
Length = 619
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKRQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|357139210|ref|XP_003571177.1| PREDICTED: high mobility group B protein 13-like [Brachypodium
distachyon]
Length = 537
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 77/144 (53%), Gaps = 24/144 (16%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK+P++ YF + + R ++ N+ E+ K+ EEWK + +A+K E +K+
Sbjct: 326 PSKPKQPMSAYFVYSQERRAALVAEKKNVP--EIGKITGEEWKSMTDAQKAPYEEVASKQ 383
Query: 106 KEIYAQNVKKYHDE------------------LTPEAIEFLRKEKE----VKKQKKEKRE 143
KE Y + ++ Y + + EA++ L+K+++ +KK K+++++
Sbjct: 384 KEEYHKQMEVYKQKKLEETQSLEKEEEEQKKVMKQEALQLLKKKEKTDNIIKKTKEKRQK 443
Query: 144 MKKLFRETGKPKKPGNSFYLFIKD 167
K+ + +PKKP +SF LF K+
Sbjct: 444 KKQENVDPNRPKKPASSFLLFSKE 467
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +PKKP + + F + R +++E P + + L+S +WK++ EKK + A+
Sbjct: 451 PNRPKKPASSFLLFSKEARKQLVEERPGVNNSTINALISVKWKELSGTEKKTWSEKAAEG 510
Query: 106 KEIYAQNVKKYHDELT 121
Y + +++Y + T
Sbjct: 511 MAAYKREMEEYTNAHT 526
>gi|426252199|ref|XP_004019803.1| PREDICTED: putative upstream-binding factor 1-like protein 1-like
[Ovis aries]
Length = 344
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 49/74 (66%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLT Y +F ++R + ++++P + E+TK++SEE++K+ E + + ++ KE
Sbjct: 96 PDLPKKPLTAYLRFFKEMRPQYLQKHPKMSNKELTKVLSEEYRKLPEQLRLKYSQDFQKE 155
Query: 106 KEIYAQNVKKYHDE 119
K+ + + + + ++
Sbjct: 156 KQEFQEKMALFREQ 169
>gi|328780490|ref|XP_395543.4| PREDICTED: hypothetical protein LOC412077 [Apis mellifera]
Length = 718
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ +NP +K+ E+ K++ + W+ + E +K EY EK Y +
Sbjct: 79 PLMPYMRYSRKVWDQVKAQNPELKLWEIGKIIGQMWRDLPEEDKTEFIEEYEAEKVEYEK 138
Query: 112 NVKKYHD 118
++K YH+
Sbjct: 139 SLKTYHN 145
>gi|307195541|gb|EFN77427.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1 [Harpegnathos saltator]
Length = 777
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ +NP +K+ E+ K++ + W+ + E +K EY EK Y +
Sbjct: 79 PLMPYMRYSRKVWDQVKAQNPELKLWEIGKIIGQMWRDLPEEDKTEFIEEYEAEKVEYEK 138
Query: 112 NVKKYHD 118
++K YH+
Sbjct: 139 SLKTYHN 145
>gi|403354143|gb|EJY76622.1| High mobility group protein 1.2 [Oxytricha trifallax]
Length = 1086
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE------- 101
PKKPL+PY F + R ++ + +P+ ++ K VS W+K+ +K+ ++
Sbjct: 354 PKKPLSPYIFFSQEKRKELKKDHPDWNSSQIMKQVSLLWQKMSADQKRDFHDQSKIDRER 413
Query: 102 YAKEKEIYAQNVKKYHDE-LTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKK 156
+ KE++ Y N E P +E +++ ++ KQ++EK++ + + ET P+K
Sbjct: 414 FEKERQEYVNNKGNEGGEPAVPSVLETVKQRSQILKQQQEKKQRYEDYVETLLPQK 469
>gi|365981373|ref|XP_003667520.1| hypothetical protein NDAI_0A01190 [Naumovozyma dairenensis CBS 421]
gi|343766286|emb|CCD22277.1| hypothetical protein NDAI_0A01190 [Naumovozyma dairenensis CBS 421]
Length = 264
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIME---RN--PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F + +R ++ + RN P + E+T+ +S++WK++ + EK++ +
Sbjct: 114 PNAPKKPLTVFFAYSAYVRQELRDERQRNGLPPLSSTEITQEISKKWKELNDTEKEKWKQ 173
Query: 101 EYAKEKEIYAQNVKKY 116
Y E E Y + +KY
Sbjct: 174 AYTVELEHYQKEKQKY 189
>gi|452839855|gb|EME41794.1| hypothetical protein DOTSEDRAFT_74007 [Dothistroma septosporum
NZE10]
Length = 108
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 30 VTTAGLKQQTSQPLS-----IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVS 84
TT G K+ + P PK+ L+ Y F + R+K+ + NP IK EV K +
Sbjct: 6 ATTRGSKKAVDKSAGGKKKKDPNMPKRGLSAYMFFANEQRDKVRDDNPGIKFGEVGKQLG 65
Query: 85 EEWKKIGEAEKKRLENEYAKEKEIYAQNVKKY 116
E+WK + E +K E + A +K+ Y + Y
Sbjct: 66 EKWKGLSEKQKAPYEAKAAADKKRYEEEKAAY 97
>gi|323304106|gb|EGA57884.1| Ixr1p [Saccharomyces cerevisiae FostersB]
Length = 443
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKK----RLENEY 102
+ PK+P + YF F IRN+++++ P K E++KL S WK++ + +KK R++N+
Sbjct: 354 QGPKRPSSAYFLFSMSIRNELLQQFPEAKXPELSKLASARWKELTDDQKKXILRRIQNQL 413
Query: 103 AK 104
K
Sbjct: 414 GK 415
>gi|303289076|ref|XP_003063826.1| histone chaperone [Micromonas pusilla CCMP1545]
gi|226454894|gb|EEH52199.1| histone chaperone [Micromonas pusilla CCMP1545]
Length = 657
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+PL+ Y F G+ R K++E P + I E+ K + +WK++ EK E++ +
Sbjct: 554 PNAPKRPLSSYMIFAGENRGKLVEETPGMSIGEIGKALGAKWKEMTAEEKVPYEDKAKEA 613
Query: 106 KEIYAQNVKKY 116
K YA +K+Y
Sbjct: 614 KAAYAVKLKEY 624
>gi|440799045|gb|ELR20106.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 143
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ T Y F + R + NP + ++TK VS++WK + + EK + A++
Sbjct: 50 PNAPKRAKTAYIIFATEERPRAKADNPELGFGDLTKCVSDKWKALSDDEKAPYLEKAAQD 109
Query: 106 KEIYAQNVKKYH 117
KE YA V KY+
Sbjct: 110 KERYADEVSKYN 121
>gi|241671170|ref|XP_002400014.1| high mobility group protein, putative [Ixodes scapularis]
gi|215506252|gb|EEC15746.1| high mobility group protein, putative [Ixodes scapularis]
Length = 740
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK 95
P+ PKKP+TPYF+F + R K NP++ + E+ KL+S++++++ + +K
Sbjct: 99 PDLPKKPMTPYFRFYHEKREKYSRENPDLSMTELAKLISKKFQELSDKKK 148
>gi|341901750|gb|EGT57685.1| CBN-PBRM-1 protein [Caenorhabditis brenneri]
Length = 1918
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 28 NSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEW 87
N TA S PL P K K + Y F ++R +IM NP+ EV+K+V EW
Sbjct: 1445 NPPGTASDAPPGSTPLMTP-KAVKSKSGYILFSAEVRKRIMHENPDAGFGEVSKIVGIEW 1503
Query: 88 KKIGEAEKKRLE 99
KK+ E +KK E
Sbjct: 1504 KKLSEEQKKHYE 1515
>gi|225195617|gb|ACN82086.1| high-mobility group box 1 [Carassius auratus]
gi|225195619|gb|ACN82087.1| high-mobility group box 1 [Megalobrama amblycephala]
gi|225195623|gb|ACN82089.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R K+ E P + I +V K + E W K EK+ E + A+
Sbjct: 80 PNAPKRPPSAFFIFCSEFRPKVKEETPGLSIGDVAKKLGEMWNKTSAEEKQPFEKKAARL 139
Query: 106 KEIYAQNVKKYH 117
KE Y +++ Y
Sbjct: 140 KEKYEKDITAYR 151
>gi|195025112|ref|XP_001986001.1| GH21124 [Drosophila grimshawi]
gi|193902001|gb|EDW00868.1| GH21124 [Drosophila grimshawi]
Length = 111
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+ +KPK+PL+ Y + R I + NP IK+ EV K E W+ + +K E + AK
Sbjct: 1 MADKPKRPLSAYMLWLNSARESIKKENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAK 58
Query: 105 EKEIYAQNVKKYH 117
K+ Y + VK +
Sbjct: 59 AKDDYDRAVKDFE 71
>gi|194882008|ref|XP_001975105.1| GG22136 [Drosophila erecta]
gi|190658292|gb|EDV55505.1| GG22136 [Drosophila erecta]
Length = 111
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+ +KPK+PL+ Y + R I NP IK+ EV K E W+ + +K E + AK
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAK 58
Query: 105 EKEIYAQNVKKYH 117
K+ Y + VK++
Sbjct: 59 AKDDYDRAVKEFE 71
>gi|195486377|ref|XP_002091483.1| HmgD [Drosophila yakuba]
gi|38047835|gb|AAR09820.1| similar to Drosophila melanogaster HmgD, partial [Drosophila
yakuba]
gi|194177584|gb|EDW91195.1| HmgD [Drosophila yakuba]
Length = 111
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+ +KPK+PL+ Y + R I NP IK+ EV K E W+ + +K E + AK
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAK 58
Query: 105 EKEIYAQNVKKYH 117
K+ Y + VK++
Sbjct: 59 AKDDYDRAVKEFE 71
>gi|195381989|ref|XP_002049715.1| GJ21748 [Drosophila virilis]
gi|194144512|gb|EDW60908.1| GJ21748 [Drosophila virilis]
Length = 112
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+ +KPK+PL+ Y + R I NP IK+ EV K E W+ + +K E + AK
Sbjct: 1 MADKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAK 58
Query: 105 EKEIYAQNVKKYH 117
K+ Y + VK +
Sbjct: 59 AKDDYDRAVKDFE 71
>gi|295913458|gb|ADG57979.1| transcription factor [Lycoris longituba]
Length = 179
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVT-KLVSEEWKKIGEAEKKRLENEYAK 104
P KPK+P + +F F + R + E+NPN K + V K ++WK + EK E + AK
Sbjct: 61 PNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAAK 120
Query: 105 EKEIYAQNVKKYHDELT 121
K Y + + Y+ +L
Sbjct: 121 RKAEYNKTMVAYNKKLA 137
>gi|225195621|gb|ACN82088.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + R K+ E P + I +V K + E W K EK+ E + A+
Sbjct: 80 PNAPKRPPSAFFIFCAEFRPKVKEETPGLSIGDVAKKLGEMWNKTSSEEKQPYEKKAARL 139
Query: 106 KEIYAQNVKKYH 117
KE Y +++ Y
Sbjct: 140 KEKYEKDITAYR 151
>gi|401402785|ref|XP_003881334.1| high mobility group protein, related [Neospora caninum Liverpool]
gi|325115746|emb|CBZ51301.1| high mobility group protein, related [Neospora caninum Liverpool]
Length = 94
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIK--IIEVTKLVSEEWKKIGEAEKKRLENEYA 103
P PK+PL+ + F R +I+ +NP +K + EV K+V E W K+ +A+KK E++
Sbjct: 17 PNAPKRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDAQKKPYESKAV 76
Query: 104 KEKEIYAQNVKKY 116
+K Y + + Y
Sbjct: 77 ADKARYEREMIAY 89
>gi|170106119|ref|XP_001884271.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164640617|gb|EDR04881.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 597
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + Y +Q +R ++ E++P + ++ ++SE+WK + EK + Y +E
Sbjct: 135 PNAPKRPASSYILYQNNVRKELKEQHPEMNNADLLTMISEQWKNMTTEEKDK----YNQE 190
Query: 106 KEIYAQNV---KKYHDELTPEAIE 126
++ Q KK +D TPE ++
Sbjct: 191 NKVLTQQYSEEKKAYDNRTPEEVQ 214
>gi|449461783|ref|XP_004148621.1| PREDICTED: high mobility group B protein 1-like [Cucumis sativus]
Length = 169
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 34 GLKQQTSQPLSI---PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIE-VTKLVSEEWKK 89
G+K+ T + L P KPK+P + +F F + R + NPN+K + V K E+WK
Sbjct: 37 GIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKS 96
Query: 90 IGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIE 126
+ AEK E + AK K Y + ++ Y + A +
Sbjct: 97 LSHAEKAPYEAKAAKRKAEYEKLMRAYDSKKVASAAD 133
>gi|432090334|gb|ELK23762.1| TOX high mobility group box family member 4 [Myotis davidii]
Length = 654
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 257 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 316
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 317 KKEYLKALAAYKDNQECQATVETVEL 342
>gi|344305949|ref|XP_003421652.1| PREDICTED: TOX high mobility group box family member 4-like
[Loxodonta africana]
Length = 619
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 16 VFNLRSCLMPHLNSVTTAGLKQQTSQPL--SIPEKPKKPLTPYFKFQGQIRNKIMERNPN 73
V + R L V AG KQ+ + P +P+KP++ Y F + I +NPN
Sbjct: 188 VEDFRRQLPSQKTVVVEAGKKQKAPKKRRKKDPNEPQKPVSAYALFFRDTQAAIKGQNPN 247
Query: 74 IKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHD----ELTPEAIEF 127
EV+K+V+ W +GE +K+ + + K+ Y + + Y D + T E +E
Sbjct: 248 ATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYKDNQECQATVETVEL 305
>gi|326664195|ref|XP_001923156.2| PREDICTED: FACT complex subunit SSRP1 [Danio rerio]
Length = 713
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P++ Y + R++I NP I I E++K E WK++G+ +K+ + + + K+
Sbjct: 543 PKRPMSAYMLWLNSSRDRIKSENPGISITEISKKAGEMWKQLGKDKKEEWDGKAEEAKKE 602
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKK-LFRETGKPKKPGNSFY 162
Y + +++Y + + ++ K+ + + +EKR+ K RE K + GN +
Sbjct: 603 YDRAMREYRESGGGSSGSSKKERKKKRGRNEEKRKRKSGAGREKEKERSTGNDSF 657
>gi|194679533|ref|XP_001787532.1| PREDICTED: putative upstream-binding factor 1-like protein 3/5-like
[Bos taurus]
gi|297491679|ref|XP_002699056.1| PREDICTED: putative upstream-binding factor 1-like protein 3/5-like
[Bos taurus]
gi|296471972|tpg|DAA14087.1| TPA: hCG1799097-like [Bos taurus]
Length = 409
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLT Y +F ++R + ++++P + E+ K++SEE++K+ E K + ++ KE
Sbjct: 96 PDLPKKPLTAYLRFFKEMRPQYLQKHPKMSNQELIKVLSEEYRKLPEQLKLKYSQDFQKE 155
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
K+ + + + + + + E +R K+ K + ++ K F+E + KP +L +
Sbjct: 156 KQEFQEKMTLFRE----QHPELVRNSKKPNVPKGSQSKVPKKFQEHVQKVKPPPENHLPV 211
Query: 166 K 166
K
Sbjct: 212 K 212
>gi|7544638|gb|AAA73079.2| unknown [Saccharomyces cerevisiae]
Length = 183
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 16/127 (12%)
Query: 16 VFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIK 75
FNL S L+ A + QT L + + PK+P + YF + R++ ++ NP ++
Sbjct: 18 TFNLASTLL-------KASKRTQTRNEL-MKQGPKRPTSAYFLYLQDHRSQFVKENPTLR 69
Query: 76 IIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA--QNVKKYHDELTP---EAIEFLRK 130
E++K+ E+W+ + EA+ K E ++ K++Y+ Q KK DE TP A F++
Sbjct: 70 PAEISKIAGEKWQNL-EADMK--EKYISERKKLYSEYQKAKKEFDEKTPPKKPAGPFIKY 126
Query: 131 EKEVKKQ 137
EV+ Q
Sbjct: 127 ANEVRSQ 133
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 37/61 (60%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP P+ K+ ++R+++ ++P+ ++ K++ ++W+ + ++ K + EY K +
Sbjct: 116 PKKPAGPFIKYANEVRSQVFAQHPDKSQLDTMKIIGDKWQSLDQSIKDKYMQEYKKAIQE 175
Query: 109 Y 109
Y
Sbjct: 176 Y 176
>gi|307187667|gb|EFN72639.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1 [Camponotus floridanus]
Length = 741
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ +NP +K+ E+ K++ + W+ + E +K EY EK Y +
Sbjct: 79 PLMPYMRYSRKVWDQVKAQNPELKLWEIGKIIGQMWRDLPEEDKTEFIEEYEAEKVEYEK 138
Query: 112 NVKKYHD 118
++K YH+
Sbjct: 139 SLKTYHN 145
>gi|159462694|ref|XP_001689577.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158283565|gb|EDP09315.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 552
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PKK L+ + F R+K+ NP I EV KL+ E WK + EK + AK+
Sbjct: 481 PNAPKKNLSAFMYFSNSNRDKVKAENPGIAFGEVGKLLGERWKAMSAEEKAPYDEMAAKD 540
Query: 106 K 106
K
Sbjct: 541 K 541
>gi|351705778|gb|EHB08697.1| Putative upstream-binding factor 1-like protein 3/5 [Heterocephalus
glaber]
Length = 403
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 47/71 (66%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PK+PLT Y +F + R +++PN+ E+TK+++EE+K++ + K++ E+ KE
Sbjct: 97 PDFPKRPLTAYIRFYKEQRALYSQKHPNLSNQELTKILAEEYKQLPQQTKQKYMEEFQKE 156
Query: 106 KEIYAQNVKKY 116
K+ + + + ++
Sbjct: 157 KQGFKEKLAQF 167
>gi|397567084|gb|EJK45382.1| hypothetical protein THAOC_36001 [Thalassiosira oceanica]
Length = 1270
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
+ P KPKKPL + F + R K + E TKL+S +W+ + EK R ++ +
Sbjct: 694 VHTPRKPKKPLNSFSLFCIEARIKFKSELVGVPSTEATKLISAKWRAMSVEEKGRYKDLH 753
Query: 103 AKEKEIYAQNVKKYHDELTPEAIE 126
EK Y ++K Y DEL IE
Sbjct: 754 NAEKAKYEVSLKNYEDELARFQIE 777
>gi|110287688|sp|Q4PBZ9.2|NHP6_USTMA RecName: Full=Non-histone chromosomal protein 6
Length = 99
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 31 TTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKI 90
++ +++T++ P+ PK+PL+ Y F R ++ NP EV +L+ +WK++
Sbjct: 10 SSTSTQKRTTKAKKDPDAPKRPLSAYMFFSQDQRERVKNANPEAGFGEVGRLLGAKWKEM 69
Query: 91 GEAEKK 96
EAEKK
Sbjct: 70 SEAEKK 75
>gi|350413525|ref|XP_003490017.1| PREDICTED: hypothetical protein LOC100744180 [Bombus impatiens]
Length = 753
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ +NP +K+ E+ K++ + W+ + E +K EY EK Y +
Sbjct: 79 PLMPYMRYSRKVWDQVKAQNPELKLWEIGKIIGQMWRDLPEEDKTEFIEEYEAEKVEYEK 138
Query: 112 NVKKYHD 118
++K YH+
Sbjct: 139 SLKTYHN 145
>gi|365989450|ref|XP_003671555.1| hypothetical protein NDAI_0H01380 [Naumovozyma dairenensis CBS 421]
gi|343770328|emb|CCD26312.1| hypothetical protein NDAI_0H01380 [Naumovozyma dairenensis CBS 421]
Length = 193
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
PKKP Y F IR I+ +P + EV+K+ SE+W+++ + EK + N+Y
Sbjct: 127 PKKPTPAYITFAQDIRESIVNEDPTLTFNEVSKITSEKWQQLDQTEKDKYLNDY 180
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 50 KKPLTPYFKFQGQIRNKIMERNP---NIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
K+P++ Y + ++++++ +P +KI+ T SE WK + EK E E K+K
Sbjct: 54 KRPMSAYLIYYTSVKDELIANSPAKSQMKILAQT--ASENWKNLSAEEKVPFEKEAEKQK 111
Query: 107 EIYAQNVKKYHDELTP 122
E Y +K+ ++L P
Sbjct: 112 ENYRSVLKEIENQLPP 127
>gi|383862615|ref|XP_003706779.1| PREDICTED: uncharacterized protein LOC100879979 [Megachile
rotundata]
Length = 767
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ +NP +K+ E+ K++ + W+ + E +K EY EK Y +
Sbjct: 79 PLMPYMRYSRKVWDQVKAQNPELKLWEIGKIIGQMWRDLPEEDKTEFIEEYEAEKVEYEK 138
Query: 112 NVKKYHD 118
++K YH+
Sbjct: 139 SLKTYHN 145
>gi|308501873|ref|XP_003113121.1| hypothetical protein CRE_25200 [Caenorhabditis remanei]
gi|308265422|gb|EFP09375.1| hypothetical protein CRE_25200 [Caenorhabditis remanei]
Length = 341
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 42/72 (58%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ P +PL PY ++ ++ K+ NP+ ++ ++ K+V + W + +AE+ ++EY E
Sbjct: 23 PKVPDRPLQPYMRYSRKMWPKVRAENPDAQLWDIGKIVGKMWLETTDAERSIFQHEYELE 82
Query: 106 KEIYAQNVKKYH 117
K Y + +K +
Sbjct: 83 KADYDKQMKNFQ 94
>gi|443704423|gb|ELU01485.1| hypothetical protein CAPTEDRAFT_111479 [Capitella teleta]
Length = 79
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
PKKPLTPY +F I ++ N + + E+ + W+++G+A+K+ E+ + K
Sbjct: 7 PKKPLTPYMRFSKSIWQQVKAANQGMSVCEIGATIGRMWRELGDADKQLYNEEFNQAK 64
>gi|149236976|ref|XP_001524365.1| hypothetical protein LELG_04337 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451900|gb|EDK46156.1| hypothetical protein LELG_04337 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 93
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 30 VTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKK 89
+ AG ++++S+ P+ PK+ L+ Y F + R+ + NP I +V KL+ E+WK
Sbjct: 1 MAAAGERKKSSRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGITFGQVGKLLGEKWKA 60
Query: 90 IGEAEKKRLENE-------YAKEKEIYAQ 111
+G +K EN+ Y KEK YA+
Sbjct: 61 LGSEDKVPYENKAEADKKRYEKEKAEYAK 89
>gi|295913526|gb|ADG58011.1| transcription factor [Lycoris longituba]
Length = 171
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVT-KLVSEEWKKIGEAEKKRLENEYAK 104
P KPK+P + +F F + R + E+NPN K + V K ++WK + EK E + AK
Sbjct: 56 PNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAAK 115
Query: 105 EKEIYAQNVKKYHDELT 121
K Y + + Y+ +L
Sbjct: 116 RKAEYNKTMVAYNKKLA 132
>gi|432097472|gb|ELK27669.1| Putative upstream-binding factor 1-like protein 1 [Myotis davidii]
Length = 389
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PK+PLTPY +F + R + +P + E+T ++SE++K++ E K + ++ KE
Sbjct: 97 PDMPKQPLTPYLRFFKEKRPLYSQMHPKLNNKELTMVMSEKYKELPEEMKLKYIQDFQKE 156
Query: 106 KEIYAQNVKKY---HDELT----PEAIEFLRKEKEVKKQKKEKREMKKL-------FRET 151
K+ + + + ++ H EL P + + +K +K+ +E+K F+
Sbjct: 157 KQEFQEKLAQFKIDHPELIQNSKPSVVHKRNPNRAPRKFQKKGKEVKSSPKNYFSEFKFH 216
Query: 152 GKPKKPG-NSFYLFIKDNIDKKEYEG 176
G+PKKP N ++ F +D +E +G
Sbjct: 217 GEPKKPPMNEYHKFHQDLWSSRELQG 242
>gi|410961840|ref|XP_003987486.1| PREDICTED: LOW QUALITY PROTEIN: TOX high mobility group box family
member 4 [Felis catus]
Length = 623
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 30 VTTAGLKQQTSQPLSI--PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEW 87
V AG KQ+ + P +P+KP++ Y F + I +NPN EV+K+V+ W
Sbjct: 206 VVEAGKKQKAPKKRXKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMW 265
Query: 88 KKIGEAEKKRLENEYAKEKEIYAQNVKKYHD----ELTPEAIEF 127
+GE +K+ + + K+ Y + + Y D + T E +E
Sbjct: 266 DSLGEEQKQVYKRKTEAAKKEYLKALAAYKDNQECQATVETVEL 309
>gi|324499900|gb|ADY39969.1| Protein polybromo-1 [Ascaris suum]
Length = 1930
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLE--NEYA 103
P+ + + Y F +IR +IM+ NP EV+K+V EWKK+ E +KK+ E EY
Sbjct: 1506 PKLNARSKSGYILFSAEIRKRIMQENPEAGFGEVSKIVGIEWKKLTEEQKKQYEVRAEYI 1565
Query: 104 KEKEIYAQNVKKYHDELTPEAI 125
+ + + H L P I
Sbjct: 1566 ASERAKQEAREPTHSRLQPGQI 1587
>gi|194755948|ref|XP_001960241.1| GF13265 [Drosophila ananassae]
gi|190621539|gb|EDV37063.1| GF13265 [Drosophila ananassae]
Length = 111
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+ +KPK+PL+ Y + R+ I NP IK+ EV K E W+ + +K E + AK
Sbjct: 1 MADKPKRPLSAYMLWLNSARDSIKRENPGIKVTEVAKKGGELWRAM--KDKSEWEAKAAK 58
Query: 105 EKEIYAQNVKKYH 117
K+ Y + VK++
Sbjct: 59 AKDDYDRAVKEFE 71
>gi|339245469|ref|XP_003378660.1| putative bromodomain protein [Trichinella spiralis]
gi|316972417|gb|EFV56095.1| putative bromodomain protein [Trichinella spiralis]
Length = 1378
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 44 SIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE-- 101
S P+ + + Y F R +IM NP+ ++K+V EWKK+ ++EKKR E E
Sbjct: 965 STPKLTSRSKSGYILFSAVARKRIMAENPDCSFGSISKIVGAEWKKLSKSEKKRYEEEAQ 1024
Query: 102 -YAKEKE 107
A+E+E
Sbjct: 1025 RIAEERE 1031
>gi|334348387|ref|XP_003342057.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Monodelphis domestica]
Length = 208
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK P + +F F + R KI NP I I +V K + E W + + EK+ N+ AK KE
Sbjct: 93 PKHPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAKLKEK 152
Query: 109 YAQNV 113
Y ++V
Sbjct: 153 YEKDV 157
>gi|260803411|ref|XP_002596583.1| hypothetical protein BRAFLDRAFT_154496 [Branchiostoma floridae]
gi|229281842|gb|EEN52595.1| hypothetical protein BRAFLDRAFT_154496 [Branchiostoma floridae]
Length = 710
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 43/72 (59%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PKK +T + + R+++ + NP+ I E+ K+ E+W+++G ++K+ E + ++
Sbjct: 544 PNAPKKAMTAFMLWLNATRSELRKENPDASIGEIGKIAGEKWREMGPSDKEEWEQKAKED 603
Query: 106 KEIYAQNVKKYH 117
KE Y +++Y
Sbjct: 604 KERYKAAMEEYQ 615
>gi|341877868|gb|EGT33803.1| hypothetical protein CAEBREN_09141 [Caenorhabditis brenneri]
Length = 342
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 43/72 (59%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ P++PL PY ++ ++ ++ NP ++ ++ K+V + W +I +AE+ ++EY E
Sbjct: 23 PKMPERPLQPYMRYSRKMWPRVRAENPEAQLWDIGKIVGKMWLEITDAERSIFQHEYELE 82
Query: 106 KEIYAQNVKKYH 117
K Y + +K +
Sbjct: 83 KADYEKQMKNFQ 94
>gi|242021451|ref|XP_002431158.1| High mobility group protein 20A, putative [Pediculus humanus
corporis]
gi|212516407|gb|EEB18420.1| High mobility group protein 20A, putative [Pediculus humanus
corporis]
Length = 299
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
E P+KPL Y F + R KI +NP E+TK ++++WK + EK++ + +K
Sbjct: 53 EDPQKPLNAYNWFVKENREKIRAQNPTWNFTEITKKLAQDWKSLSCEEKQQYIDSAENDK 112
Query: 107 EIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKE 140
E YA+ + Y +A + +K KE K+ KE
Sbjct: 113 ERYAKELTAYKQTDAYKAFKKSQKRKESCKKLKE 146
>gi|156379244|ref|XP_001631368.1| predicted protein [Nematostella vectensis]
gi|156218407|gb|EDO39305.1| predicted protein [Nematostella vectensis]
Length = 66
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+ ++ Y + R +I ++NP I + EV+K+ E WK + +K + E + A EK+
Sbjct: 1 PKRAMSAYMLWLNDTRQEIKDKNPGISVTEVSKVAGEMWKNL--TDKSKWEEKAAIEKQK 58
Query: 109 YAQNVKKY 116
Y Q +K+Y
Sbjct: 59 YVQRMKEY 66
>gi|330804174|ref|XP_003290073.1| hypothetical protein DICPUDRAFT_13388 [Dictyostelium purpureum]
gi|325079827|gb|EGC33409.1| hypothetical protein DICPUDRAFT_13388 [Dictyostelium purpureum]
Length = 79
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
P++ L+P+ F + R+ I +NP+ E+ L+ ++W +IG EKK+ EN A++K+
Sbjct: 8 PRRYLSPFIYFSKEYRSTIKAQNPSSTFGEIGSLLGQKWSQIGADEKKKYENMAAEDKKR 67
Query: 109 YAQNVKKYHDEL 120
+ K+Y ++L
Sbjct: 68 WEIEKKQYEEKL 79
>gi|417412008|gb|JAA52420.1| Putative hmg box-containing protein, partial [Desmodus rotundus]
Length = 625
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 226 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 285
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 286 KKEYLKALAAYKDNQECQATVETVEL 311
>gi|348577217|ref|XP_003474381.1| PREDICTED: TOX high mobility group box family member 4-like [Cavia
porcellus]
Length = 619
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|354491199|ref|XP_003507743.1| PREDICTED: TOX high mobility group box family member 4-like
[Cricetulus griseus]
gi|344252329|gb|EGW08433.1| TOX high mobility group box family member 4 [Cricetulus griseus]
Length = 619
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|440895123|gb|ELR47392.1| Putative upstream-binding factor 1-like protein 1, partial [Bos
grunniens mutus]
Length = 389
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLT Y +F ++R + ++++P + E+ K++SEE++K+ E K + ++ KE
Sbjct: 96 PDLPKKPLTAYLRFLKEMRPQYLQKHPKMSNQELIKVLSEEYRKLPEQLKLKYSQDFQKE 155
Query: 106 KEIYAQNVKKYHDELTPEAIE 126
K+ + + + + E PE ++
Sbjct: 156 KQEFQEKMTLFR-EQHPELVQ 175
>gi|427794389|gb|JAA62646.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 604
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 38/76 (50%)
Query: 41 QPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
+P KPK+P T + F G R ++ + P + + KL E W+ + E +K+
Sbjct: 250 KPARDANKPKRPGTAFMLFMGDFRKEMAGKEPEGGVAALAKLGGERWRSMSEEDKRPYVE 309
Query: 101 EYAKEKEIYAQNVKKY 116
+EK Y QN+++Y
Sbjct: 310 RQNEEKMKYEQNMEEY 325
>gi|2196548|gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]
Length = 142
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIK-IIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
P KPK+P + +F F + R E++PN K + V K + WKK+ EAEK + + K
Sbjct: 33 PNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAAVGKAGGDAWKKLSEAEKAPYQAKAEK 92
Query: 105 EKEIYAQNVKKYHDELTPEAIE 126
K Y +N+ Y+ + +A E
Sbjct: 93 RKAEYQKNMDAYNRKQAGDAEE 114
>gi|50510609|dbj|BAD32290.1| mKIAA0737 protein [Mus musculus]
Length = 627
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 228 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 287
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 288 KKEYLKALAAYKDNQECQATVETVEL 313
>gi|291403500|ref|XP_002717936.1| PREDICTED: epidermal Langerhans cell protein LCP1 [Oryctolagus
cuniculus]
Length = 644
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 245 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 304
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 305 KKEYLKALAAYKDNQECQATVETVEL 330
>gi|40788344|dbj|BAA34457.2| KIAA0737 protein [Homo sapiens]
Length = 629
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 228 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 287
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 288 KKEYLKALAAYKDNQECQATVETVEL 313
>gi|255936601|ref|XP_002559327.1| Pc13g09020 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583947|emb|CAP91971.1| Pc13g09020 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 108
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F R+K+ E NP I +V K + ++WK + E ++K +++ A +
Sbjct: 25 PNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKQLGDKWKALSETDRKPYDDKAAAD 84
Query: 106 KEIYAQNVKKY 116
K+ Y + Y
Sbjct: 85 KKRYEEEKAAY 95
>gi|33112344|sp|Q99PM1.1|TOX4_RAT RecName: Full=TOX high mobility group box family member 4; AltName:
Full=Epidermal Langerhans cell protein LCP1
gi|12656266|gb|AAK00807.1|AF267197_1 epidermal Langerhans cell protein LCP1 [Rattus norvegicus]
Length = 619
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|332841826|ref|XP_003314295.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Pan troglodytes]
Length = 621
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|312091239|ref|XP_003146909.1| hypothetical protein LOAG_11340 [Loa loa]
gi|307757926|gb|EFO17160.1| hypothetical protein LOAG_11340 [Loa loa]
Length = 344
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 27 LNSVTTAGLKQQTSQ--PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVS 84
+ AG+++ +S P P+K + T Y F G+ R +I +P + +EV+K V
Sbjct: 19 CGTAAVAGVQETSSSGTPAKKPKKACRARTGYMLFHGEARKRIRAAHPELNFVEVSKRVG 78
Query: 85 EEWKKIGEAEKKR 97
EEW K+ EK +
Sbjct: 79 EEWAKVSAEEKNK 91
>gi|52138631|ref|NP_775446.2| TOX high mobility group box family member 4 [Rattus norvegicus]
gi|51859412|gb|AAH81696.1| TOX high mobility group box family member 4 [Rattus norvegicus]
gi|149033679|gb|EDL88477.1| epidermal Langerhans cell protein LCP1 [Rattus norvegicus]
Length = 619
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|29748100|gb|AAH50091.1| TOX high mobility group box family member 4 [Mus musculus]
Length = 619
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|410208198|gb|JAA01318.1| TOX high mobility group box family member 4 [Pan troglodytes]
gi|410251418|gb|JAA13676.1| TOX high mobility group box family member 4 [Pan troglodytes]
gi|410298720|gb|JAA27960.1| TOX high mobility group box family member 4 [Pan troglodytes]
gi|410340637|gb|JAA39265.1| TOX high mobility group box family member 4 [Pan troglodytes]
Length = 621
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|395732940|ref|XP_002813012.2| PREDICTED: nuclear autoantigen Sp-100-like [Pongo abelii]
Length = 263
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P +F F + R KI +P + I +V K ++ W A+K+ EN+ A+
Sbjct: 151 PNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYENKAARL 210
Query: 106 KEIYAQNVKKYHDELTPEA 124
KE Y +++ Y + P +
Sbjct: 211 KEKYKKDIAAYRAKGKPNS 229
>gi|289063374|ref|NP_001165884.1| TOX high mobility group box family member 4 [Macaca mulatta]
gi|332223460|ref|XP_003260888.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Nomascus leucogenys]
gi|402875600|ref|XP_003901588.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Papio anubis]
gi|224493433|sp|Q5R6A9.2|TOX4_PONAB RecName: Full=TOX high mobility group box family member 4
gi|380784003|gb|AFE63877.1| TOX high mobility group box family member 4 [Macaca mulatta]
gi|383423311|gb|AFH34869.1| TOX high mobility group box family member 4 [Macaca mulatta]
gi|383423313|gb|AFH34870.1| TOX high mobility group box family member 4 [Macaca mulatta]
Length = 621
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|295913700|gb|ADG58091.1| transcription factor [Lycoris longituba]
Length = 162
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVT-KLVSEEWKKIGEAEKKRLENEYAK 104
P KPK+P + +F F + R + E+NPN K + V K ++WK + EK E + AK
Sbjct: 43 PNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAAK 102
Query: 105 EKEIYAQNVKKYHDELT 121
K Y + + Y+ +L
Sbjct: 103 RKAEYNKTMVAYNKKLA 119
>gi|295913475|gb|ADG57987.1| transcription factor [Lycoris longituba]
Length = 162
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVT-KLVSEEWKKIGEAEKKRLENEYAK 104
P KPK+P + +F F + R + E+NPN K + V K ++WK + EK E + AK
Sbjct: 43 PNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAAK 102
Query: 105 EKEIYAQNVKKYHDELT 121
K Y + + Y+ +L
Sbjct: 103 RKAEYNKTMVAYNKKLA 119
>gi|12656035|gb|AAK00713.1|AF228408_1 epidermal Langerhans cell protein LCP1 [Mus musculus]
Length = 619
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|197098022|ref|NP_001126876.1| TOX high mobility group box family member 4 [Pongo abelii]
gi|55733008|emb|CAH93190.1| hypothetical protein [Pongo abelii]
Length = 621
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|148710301|gb|EDL42247.1| RIKEN cDNA 5730589K01, isoform CRA_b [Mus musculus]
Length = 619
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|403264241|ref|XP_003924398.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 621
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|397466073|ref|XP_003804797.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Pan paniscus]
Length = 620
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|403264243|ref|XP_003924399.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 598
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 197 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 256
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 257 KKEYLKALAAYKDNQECQATVETVEL 282
>gi|346324407|gb|EGX94004.1| nucleosome binding protein [Cordyceps militaris CM01]
Length = 96
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 24 MPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLV 83
MP + G + + + P PK+ L+ Y F + R+ + E NP + +V K++
Sbjct: 1 MPKAAAAPKRGARVEKKRAKKDPNAPKRGLSAYMFFANEQRDNVREENPGVSFGQVGKIL 60
Query: 84 SEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDE 119
E WK + E ++ E + A +K K+Y DE
Sbjct: 61 GERWKALSEKQRVPYEAKAAADK-------KRYEDE 89
>gi|73977370|ref|XP_532626.2| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Canis lupus familiaris]
Length = 619
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|403264245|ref|XP_003924400.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 595
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 194 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 253
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 254 KKEYLKALAAYKDNQECQATVETVEL 279
>gi|397466077|ref|XP_003804799.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Pan paniscus]
Length = 594
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 194 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 253
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 254 KKEYLKALAAYKDNQECQATVETVEL 279
>gi|395861628|ref|XP_003803083.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Otolemur garnettii]
Length = 620
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|384489718|gb|EIE80940.1| hypothetical protein RO3G_05645 [Rhizopus delemar RA 99-880]
Length = 176
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK 95
P PK+ L+ Y + +R K+ +P++K IE+ KLV E W K+ E EK
Sbjct: 52 PNAPKRNLSSYMLYSQAVRPKVAAEHPDMKAIEIAKLVGEMWNKLSEKEK 101
>gi|390468839|ref|XP_003734010.1| PREDICTED: TOX high mobility group box family member 4 [Callithrix
jacchus]
Length = 621
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|166706895|ref|NP_075923.2| TOX high mobility group box family member 4 [Mus musculus]
gi|342187130|sp|Q8BU11.3|TOX4_MOUSE RecName: Full=TOX high mobility group box family member 4; AltName:
Full=Epidermal Langerhans cell protein LCP1
gi|74150964|dbj|BAE27616.1| unnamed protein product [Mus musculus]
gi|74190752|dbj|BAE28170.1| unnamed protein product [Mus musculus]
Length = 619
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|7662274|ref|NP_055643.1| TOX high mobility group box family member 4 [Homo sapiens]
gi|426376296|ref|XP_004054940.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Gorilla gorilla gorilla]
gi|33112349|sp|O94842.1|TOX4_HUMAN RecName: Full=TOX high mobility group box family member 4; AltName:
Full=Epidermal Langerhans cell protein LCP1
gi|15489162|gb|AAH13689.1| TOX high mobility group box family member 4 [Homo sapiens]
gi|119586784|gb|EAW66380.1| chromosome 14 open reading frame 92, isoform CRA_a [Homo sapiens]
gi|167773919|gb|ABZ92394.1| TOX high mobility group box family member 4 [synthetic construct]
gi|168278709|dbj|BAG11234.1| TOX high mobility group box family member 4 [synthetic construct]
gi|190689707|gb|ACE86628.1| TOX high mobility group box family member 4 protein [synthetic
construct]
gi|190691069|gb|ACE87309.1| TOX high mobility group box family member 4 protein [synthetic
construct]
Length = 621
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|74142195|dbj|BAE31864.1| unnamed protein product [Mus musculus]
Length = 619
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|207080322|ref|NP_001128875.1| DKFZP459D0119 protein [Pongo abelii]
gi|55731997|emb|CAH92707.1| hypothetical protein [Pongo abelii]
Length = 621
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|168032698|ref|XP_001768855.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168032700|ref|XP_001768856.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679967|gb|EDQ66408.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679968|gb|EDQ66409.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 110
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIK-IIEVTKLVSEEWKKIGEAEKKRLENE 101
L P PK+P T +F F + R NPN+K + V K E+WK + EAEK+ +
Sbjct: 6 LKDPNAPKRPPTAFFIFLNEFREVFKRENPNVKGVTAVGKAGGEKWKSMSEAEKQPFMTK 65
Query: 102 YAKEKEIYAQNVKKYHDELTPEAIE 126
++K Y + + Y+ + E +E
Sbjct: 66 AVQKKSEYDKTISAYNKKQDAEEVE 90
>gi|402875604|ref|XP_003901590.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Papio anubis]
gi|441667216|ref|XP_004091957.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Nomascus leucogenys]
Length = 595
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 194 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 253
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 254 KKEYLKALAAYKDNQECQATVETVEL 279
>gi|402875602|ref|XP_003901589.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Papio anubis]
gi|441667208|ref|XP_004091956.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Nomascus leucogenys]
Length = 598
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 197 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 256
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 257 KKEYLKALAAYKDNQECQATVETVEL 282
>gi|397466075|ref|XP_003804798.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Pan paniscus]
Length = 597
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 197 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 256
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 257 KKEYLKALAAYKDNQECQATVETVEL 282
>gi|348514195|ref|XP_003444626.1| PREDICTED: FACT complex subunit SSRP1-like [Oreochromis niloticus]
Length = 709
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P++ Y + R +I NP I + E++K E W+++ + EK+ E + + K+
Sbjct: 543 PKRPMSAYMLWLNSSRERIKSENPGISVTEISKKAGEMWRQLSKDEKQEWEAKAGEAKKQ 602
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSF 161
Y + K+Y + + A RKE + KK+ ++ K + + + +SF
Sbjct: 603 YDKAKKEYKE--SGGATSSPRKESKKSGAKKDDKKRKSAGADKDRERGGNDSF 653
>gi|167998110|ref|XP_001751761.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696859|gb|EDQ83196.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 356
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P + KKP + + + R K+ E NPN E++ ++ ++WK + E ++K E+ Y E
Sbjct: 71 PNRLKKPKSAFLLWCKVHRQKVCEENPNATFAEISTILGDKWKNVSEEDRKPYEDRYKVE 130
Query: 106 KEIY----------AQNVKKYHDE 119
K++Y A+ +K +H+E
Sbjct: 131 KDVYLKLVGKEKREAEALKLFHEE 154
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPKKPL+ Y F ++R + + E +S++WK++ E +K+ + A
Sbjct: 277 PNKPKKPLSSYLIFGMEMRKSLSNNQVGLNFAETNAHISQKWKELSEKDKEVWNEKAAVL 336
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y ++++Y L
Sbjct: 337 KKKYDADMEEYRSTL 351
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 24/116 (20%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLEN---EYAKEKEI 108
P+T +F F R ++E N + E+ K++ EEWK + A++ E AKEK+
Sbjct: 196 PITAFFAFSQSRRPALLELNK--PVTEIAKILGEEWKSMSPAKRAPFEEIMKNQAKEKKD 253
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLF 164
A K E K Q KEK++ K + KPKKP +S+ +F
Sbjct: 254 MALGKKDLVSE---------------KDQAKEKKKAK----DPNKPKKPLSSYLIF 290
>gi|170584804|ref|XP_001897183.1| HMG box family protein [Brugia malayi]
gi|158595431|gb|EDP33986.1| HMG box family protein [Brugia malayi]
Length = 184
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%)
Query: 38 QTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKR 97
Q++ P + ++PL Y F Q R K++ NPN+K+ E ++++ E+WK + E EK++
Sbjct: 67 QSASPADDHQFIRRPLNAYMIFTKQERKKLLALNPNMKMHEASRIMGEKWKNMSEKEKRQ 126
>gi|432951224|ref|XP_004084757.1| PREDICTED: high mobility group protein B2-like [Oryzias latipes]
Length = 221
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F R KI E NP I I ++ K + E W +K E + AK
Sbjct: 115 PNAPKRPPSAFFVFCSDHRPKIKEDNPGISIGDIAKKLGELWATQSAKDKAPYEAKAAKL 174
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 175 KEKYEKDVAAY 185
>gi|432926090|ref|XP_004080824.1| PREDICTED: transcription factor A, mitochondrial-like [Oryzias
latipes]
Length = 286
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 24/157 (15%)
Query: 17 FNLRSCLMPHLNSVT---TAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPN 73
F+ SC P L +T T K T+QP PK+PL Y +F + + ++++NP
Sbjct: 20 FSAFSCSNPFLRCLTAVKTGPGKCLTTQPGG---PPKRPLNGYLRFVMEQKPAVVKQNP- 75
Query: 74 IKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKE 133
G A ++ ++ + + ++++Y +LTP ++ EK+
Sbjct: 76 -----------------GTAAGLPFQDAMVQDMQKFKLDLQEYRSQLTPAQLQQQAAEKK 118
Query: 134 VKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDNID 170
+ K++ K+ GKPK+P ++F +F+ ++ +
Sbjct: 119 QRMSKRKAIRKKRELTSLGKPKRPRSAFNIFMSEHFE 155
>gi|330798400|ref|XP_003287241.1| hypothetical protein DICPUDRAFT_72244 [Dictyostelium purpureum]
gi|325082760|gb|EGC36232.1| hypothetical protein DICPUDRAFT_72244 [Dictyostelium purpureum]
Length = 139
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
P++ L+P+ F + R+ I +NP+ E+ L+ ++W +IG EKK+ EN A++K+
Sbjct: 52 PRRYLSPFIFFSKEYRSTIKAQNPSSTFGEIGSLLGQKWSQIGADEKKKYENMAAEDKKR 111
Query: 109 YAQNVKKYHDEL 120
+ K+Y ++L
Sbjct: 112 WEIEKKQYEEKL 123
>gi|221107550|ref|XP_002154748.1| PREDICTED: transcription factor A, mitochondrial-like [Hydra
magnipapillata]
Length = 274
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 13/129 (10%)
Query: 44 SIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
++P K+P P+ F + + P+I E +K+VS+ WK + +EK+R EN Y
Sbjct: 105 NLPVIRKRPPAPFIMFSNDQSEVLRLKYPDI--TERSKVVSKMWKNLSLSEKQRYENIY- 161
Query: 104 KEKEIYAQNVKKYHDELTPE---AIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNS 160
KEK I Y D LT E AI+ +K + +K++ ++++ +P +P NS
Sbjct: 162 KEKMIV------YQDSLTDEEKVAIK-EKKARSIKRKNLKEKKKYSKESLLNRPIRPSNS 214
Query: 161 FYLFIKDNI 169
+ LF+K+N+
Sbjct: 215 WVLFMKENL 223
>gi|41055925|ref|NP_957297.1| nucleolar transcription factor 1 [Danio rerio]
gi|32766637|gb|AAH55140.1| Zgc:63557 [Danio rerio]
Length = 719
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K + E+ +E
Sbjct: 111 PDFPKKPLTPYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPEKKKLKYIQEFQRE 170
Query: 106 KEIYAQNVKKYHDELTPEAIE 126
KE + +N+ ++ ++ P+ IE
Sbjct: 171 KESFEKNMARFKED-HPDLIE 190
>gi|426376300|ref|XP_004054942.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Gorilla gorilla gorilla]
Length = 595
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 194 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 253
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 254 KKEYLKALAAYKDNQECQATVETVEL 279
>gi|398398886|ref|XP_003852900.1| hypothetical protein MYCGRDRAFT_31129, partial [Zymoseptoria
tritici IPO323]
gi|339472782|gb|EGP87876.1| hypothetical protein MYCGRDRAFT_31129 [Zymoseptoria tritici IPO323]
Length = 90
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 49 PKKPLTPYFKF---QGQIRNKIMERNPNI---KIIEVTKLVSEEWKKIGEAEKKRLENEY 102
PK+PLT YF++ Q I + M NP+ K +++KL +E WK + +AE++ + Y
Sbjct: 13 PKRPLTAYFRYLREQRPILTREMAENPDTEGTKAGDISKLATERWKALTDAEREPYKQAY 72
Query: 103 AKEKEIYAQNVKKYHDEL 120
KE Y + K Y + L
Sbjct: 73 QKELLKYETDTKAYKESL 90
>gi|328856362|gb|EGG05484.1| hypothetical protein MELLADRAFT_31192 [Melampsora larici-populina
98AG31]
Length = 82
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+PL+ Y F R +I NP + E+ +L+ +WK +GE EKK E+ ++
Sbjct: 10 PNAPKRPLSAYMFFSQDWRERIKTENPEVSFGEIGRLLGLKWKSLGEEEKKPYEDMACRD 69
Query: 106 K 106
K
Sbjct: 70 K 70
>gi|426376298|ref|XP_004054941.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Gorilla gorilla gorilla]
gi|194391264|dbj|BAG60750.1| unnamed protein product [Homo sapiens]
Length = 598
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 197 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 256
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 257 KKEYLKALAAYKDNQECQATVETVEL 282
>gi|351705242|gb|EHB08161.1| TOX high mobility group box family member 4 [Heterocephalus glaber]
Length = 608
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQTTVETVEL 305
>gi|145233003|ref|XP_001399874.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|317026969|ref|XP_003188583.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|134056796|emb|CAK37704.1| unnamed protein product [Aspergillus niger]
gi|350634700|gb|EHA23062.1| hypothetical protein ASPNIDRAFT_206990 [Aspergillus niger ATCC
1015]
Length = 103
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F R K+ E NP I +V K++ E WK + + +++ E + A +
Sbjct: 22 PNAPKRGLSAYMFFANDNREKVREENPGISFGQVGKMLGERWKALSDTDRRPYEEKAAAD 81
Query: 106 KEIYAQNVKKYH 117
K+ Y Y+
Sbjct: 82 KKRYEDEKASYN 93
>gi|242025658|ref|XP_002433241.1| glutamic acid-rich protein precursor, putative [Pediculus humanus
corporis]
gi|212518782|gb|EEB20503.1| glutamic acid-rich protein precursor, putative [Pediculus humanus
corporis]
Length = 817
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 74/128 (57%), Gaps = 12/128 (9%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ P +PL+ Y + + ++K+++ NP +++ +V+K++SE +K + + E+ + + AK+
Sbjct: 338 PDMPPRPLSTYMLYYLEQKDKVVKENPGMEMTQVSKIISEMYKNLSQEERDKYTDLAAKQ 397
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
++ + +VK EF R+ E+ +Q++ +R+++ T P+K N F LF
Sbjct: 398 RQNF--DVK---------LSEFYREHPEIAQQQQ-QRKIQGKESSTKGPRKASNPFKLFF 445
Query: 166 KDNIDKKE 173
++ + K E
Sbjct: 446 QEQLKKHE 453
>gi|170033409|ref|XP_001844570.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874308|gb|EDS37691.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 113
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+ EKPK+PL+ Y + R I + NP IK+ E+ K E W+ G +K EN+ AK
Sbjct: 1 MAEKPKRPLSAYMLWLNSAREGIKKENPGIKVTEIAKKGGELWR--GMKDKTEWENKAAK 58
Query: 105 EKEIYAQNVKKYH 117
K+ Y + V+++
Sbjct: 59 MKDEYNKAVQEFE 71
>gi|431898745|gb|ELK07122.1| TOX high mobility group box family member 4 [Pteropus alecto]
Length = 597
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 198 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 257
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 258 KKEYLKALAAYKDNQECQATVETVEL 283
>gi|395861632|ref|XP_003803085.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Otolemur garnettii]
Length = 594
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 194 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 253
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 254 KKEYLKALAAYKDNQECQATVETVEL 279
>gi|395861630|ref|XP_003803084.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Otolemur garnettii]
Length = 597
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 197 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 256
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 257 KKEYLKALAAYKDNQECQATVETVEL 282
>gi|345780986|ref|XP_864251.2| PREDICTED: TOX high mobility group box family member 4 isoform 4
[Canis lupus familiaris]
Length = 596
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 197 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 256
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 257 KKEYLKALAAYKDNQECQATVETVEL 282
>gi|296214431|ref|XP_002753819.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Callithrix jacchus]
Length = 598
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 197 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 256
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 257 KKEYLKALAAYKDNQECQATVETVEL 282
>gi|444730527|gb|ELW70909.1| High mobility group protein B1 [Tupaia chinensis]
Length = 238
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 36 KQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK 95
K +T + P PK+P +F F + R KI +P + I + K + E W +K
Sbjct: 82 KGETKKKFKDPNAPKRPPLAFFLFCSEYRPKIEGEHPGLSIGDTAKKLGELWNNTAANDK 141
Query: 96 KRLENEYAKEKEIYAQNVKKYHDELTPEAI 125
+ E E AK KE Y +++ Y + P+A
Sbjct: 142 QPYEKEAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 23/124 (18%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPN--IKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
P+KP+ ++ Y F + +++P+ + E +K SE WK + EK + E+
Sbjct: 6 PKKPRGKMSSYAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWKAMSAKEKGKFEDMAK 65
Query: 104 KEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYL 163
+K Y + +K Y + P K E KK F++ PK+P +F+L
Sbjct: 66 VDKTRYEREMKTY---IPP------------------KGETKKKFKDPNAPKRPPLAFFL 104
Query: 164 FIKD 167
F +
Sbjct: 105 FCSE 108
>gi|440794204|gb|ELR15371.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 193
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PKK L+ Y F R+K+ + NP+ E+ KL+ ++W K +++K + E + K+
Sbjct: 107 PNAPKKALSAYMFFAQANRDKVKKENPDATFGELGKLLGKQWSKASKSDKAKYEAKANKD 166
Query: 106 KEIYAQNVKKYH 117
KE Y + KY
Sbjct: 167 KERYEKEKAKYD 178
>gi|390468842|ref|XP_002753818.2| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Callithrix jacchus]
Length = 595
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 194 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 253
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 254 KKEYLKALAAYKDNQECQATVETVEL 279
>gi|392343504|ref|XP_003754904.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
gi|392356039|ref|XP_003752197.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
Length = 168
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 25/125 (20%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPN--IKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
+PK ++PY F RN++ E+ PN E ++ SE+W+ I E EK++ E ++
Sbjct: 8 RPKVNVSPYVHFMMDFRNQMREQQPNSYYDFTEFSRKCSEKWRTISEQEKRKYEALAKRD 67
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
++ Y + ++ Y P ++ R+ P+KP +SF LF
Sbjct: 68 RDRYQREMRNY---TGPRR--------------------ERRRRDPNAPRKPPSSFLLFS 104
Query: 166 KDNID 170
D+ D
Sbjct: 105 MDHFD 109
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKR-------L 98
P P+KP + + F ++I E++PN + +V K W + E +K L
Sbjct: 90 PNAPRKPPSSFLLFSMDHFDEIKEQHPNWTVAQVAKAAKRMWSRCSEVDKSHYVEKAAIL 149
Query: 99 ENEYAKEKEIYAQNVKK 115
+Y +E+E Y ++
Sbjct: 150 RAKYLEEREAYYHQCQR 166
>gi|149692184|ref|XP_001505212.1| PREDICTED: TOX high mobility group box family member 4-like isoform
1 [Equus caballus]
Length = 619
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|358372276|dbj|GAA88880.1| nucleosome binding protein (Nhp6a) [Aspergillus kawachii IFO 4308]
Length = 104
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F R K+ E NP I +V K++ E WK + + +++ E + A +
Sbjct: 23 PNAPKRGLSAYMFFANDNREKVREENPGISFGQVGKMLGERWKALSDTDRRPYEEKAAAD 82
Query: 106 KEIYAQNVKKYH 117
K+ Y Y+
Sbjct: 83 KKRYEDEKASYN 94
>gi|82658290|ref|NP_001032501.1| high mobility group protein B2 [Danio rerio]
gi|81294190|gb|AAI07992.1| Zgc:123215 [Danio rerio]
Length = 213
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F R K+ NP I I ++ K + E W K+ EK E + K
Sbjct: 92 PNAPKRPPSAFFVFCSDHRPKVKGDNPGISIGDIAKKLGEMWSKLSPKEKSPYEQKAMKL 151
Query: 106 KEIYAQNVKKYH 117
KE Y ++V Y
Sbjct: 152 KEKYEKDVAAYR 163
>gi|194389432|dbj|BAG61682.1| unnamed protein product [Homo sapiens]
Length = 595
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 194 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQIYKRKTEAA 253
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 254 KKEYLKALAAYKDNQECQATVETVEL 279
>gi|347441690|emb|CCD34611.1| similar to transcription factor HMG [Botryotinia fuckeliana]
Length = 101
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F + R+ + E NP I +V K++ E WK + E ++ E AK+
Sbjct: 21 PNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNEKQRGPYEESAAKD 80
Query: 106 KEIYAQNVKKYH 117
K+ Y + Y+
Sbjct: 81 KKRYEEEKANYN 92
>gi|409050062|gb|EKM59539.1| hypothetical protein PHACADRAFT_250106 [Phanerochaete carnosa
HHB-10118-sp]
Length = 256
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + Y FQ ++R ++ ++PNI E+ +++ W + + +K R E+ +A
Sbjct: 96 PNAPKRPPSSYLLFQNEVRQELKAKHPNIPNNELLAKIAKAWGDMPKEQKDRYESRHAVS 155
Query: 106 KEIYAQNVKKYHDELT 121
K Y + K+Y LT
Sbjct: 156 KNHYLEQKKEYERTLT 171
>gi|338717126|ref|XP_003363590.1| PREDICTED: TOX high mobility group box family member 4-like isoform
2 [Equus caballus]
Length = 596
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 197 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 256
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 257 KKEYLKALAAYKDNQECQATVETVEL 282
>gi|325181980|emb|CCA16434.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 204
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRL 98
P+ PK+ L+ YF F + R+ + + NP+ KI E+ L++E+W+ + EKKR+
Sbjct: 110 PDAPKRALSAYFFFCNEARDALRQENPDKKITEIASLLAEKWRNL--PEKKRV 160
>gi|194381494|dbj|BAG58701.1| unnamed protein product [Homo sapiens]
Length = 549
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 148 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 207
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 208 KKEYLKALAAYKDNQECQATVETVEL 233
>gi|159162245|pdb|1E7J|A Chain A, Hmg-D Complexed To A Bulge Dna
Length = 74
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+ +KPK+PL+ Y + R I NP IK+ EV K E W+ + +K E + AK
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAK 58
Query: 105 EKEIYAQNVKKYH 117
K+ Y + VK++
Sbjct: 59 AKDDYDRAVKEFE 71
>gi|156383950|ref|XP_001633095.1| predicted protein [Nematostella vectensis]
gi|156220160|gb|EDO41032.1| predicted protein [Nematostella vectensis]
Length = 258
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK PLT Y +F + R K+ NP++ EVT+++ W ++ +K+ E K+KE
Sbjct: 15 PKAPLTGYVRFLNEHREKVRSENPDLPFHEVTRILGNMWSQLPTPQKQLFLEEAEKDKER 74
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKK 136
Y + +++Y T + F+ K+K +KK
Sbjct: 75 YMKELEEYQRTDTYKM--FIAKQKALKK 100
>gi|388580279|gb|EIM20595.1| HMG-box [Wallemia sebi CBS 633.66]
Length = 305
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 38 QTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKR 97
+ ++P PE PK+P + Y FQ +R + ++P E V EW+ +G+ EK++
Sbjct: 85 RATKPQKDPEAPKRPASAYLLFQNDLRTR---KDPAQSQTEFMAHVGSEWQSLGKEEKEK 141
Query: 98 LENEYAKEKEIYAQNVKKY 116
+ Y K E++ + +KY
Sbjct: 142 YQKSYQKACEVFEKEREKY 160
>gi|297275778|ref|XP_002801070.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related-like
[Macaca mulatta]
Length = 375
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKK 96
+P PK P+T Y +F + R +I R+P++ E+TK++ EW K+ EK+
Sbjct: 149 LPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQ 200
>gi|194038959|ref|XP_001929153.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Sus scrofa]
Length = 620
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|109490746|ref|XP_001074778.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392351213|ref|XP_003750876.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 211
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 36 KQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK 95
K +T + P PK P + +F F + R KI +P + I +V K + E W +K
Sbjct: 82 KGETKKKFKDPNAPKTPPSAFFLFCSEYRPKIKGEHPGLSIGDVVKKLGEMWTNTAADDK 141
Query: 96 KRLENEYAKEKEIYAQNVKKYHDELTPEAI 125
+ E AK KE Y +++ Y + P+A
Sbjct: 142 QPYEKMAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 23/122 (18%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPN--IKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
P+K + ++ Y F R + +++P+ + E +K SE WK + EK + E+
Sbjct: 6 PKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 104 KEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYL 163
+K Y + +K Y ++P K E KK F++ PK P ++F+L
Sbjct: 66 ADKARYEREMKTY---ISP------------------KGETKKKFKDPNAPKTPPSAFFL 104
Query: 164 FI 165
F
Sbjct: 105 FC 106
>gi|402591991|gb|EJW85920.1| hypothetical protein WUBG_03167 [Wuchereria bancrofti]
Length = 344
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 6 LTTGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPL---TPYFKFQGQ 62
+T + +GG V +V G Q+TS + +KPKK T Y F G+
Sbjct: 8 VTDNLASGGTVCG---------TAVAPGG--QETSSSATPAKKPKKACRARTGYMLFHGE 56
Query: 63 IRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKR 97
R +I +P + +EV+K V EEW K+ EK +
Sbjct: 57 ARKRIRAAHPELNFVEVSKRVGEEWAKVSAEEKNK 91
>gi|444525653|gb|ELV14121.1| TOX high mobility group box family member 4 [Tupaia chinensis]
Length = 600
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 280 KKEYLKALAAYKDNQECQATVETVEL 305
>gi|443899697|dbj|GAC77026.1| isocitrate dehydrogenase, alpha subunit [Pseudozyma antarctica
T-34]
Length = 308
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 47/84 (55%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
L P+ PK+P + Y FQ ++R +I +++P + V + VSE WK++ + ++K ++
Sbjct: 224 LRDPDAPKRPPSAYLLFQNEVRQEIRKKHPGLPYSSVLRKVSEAWKELTDEQQKVYHDKT 283
Query: 103 AKEKEIYAQNVKKYHDELTPEAIE 126
+ + Q K++ + P +++
Sbjct: 284 TENMVTWNQQKKEHEANMNPISLD 307
>gi|297268944|ref|XP_002799789.1| PREDICTED: putative upstream-binding factor 1-like protein 1-like
[Macaca mulatta]
Length = 575
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 81/148 (54%), Gaps = 19/148 (12%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PK+PLT Y +F + + + P ++ E+TK++S+++K++ E K++ ++ KE
Sbjct: 279 PDFPKRPLTAYIRFFKENWPRYSQMYPGMRSQELTKILSKKYKELPEQMKQKYIQDFQKE 338
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRK-----------EKEVKKQKKEKREMKKL------F 148
K+ + + + ++ +E P+ ++ +K +K+V+K +E R + K
Sbjct: 339 KQEFEEKLARFREE-HPDLVQKAKKSDVSKRIQTKVQKKVQKNMEEVRSLPKTDQFLKKV 397
Query: 149 RETGKPKKPG-NSFYLFIKDNIDKKEYE 175
+ G+P+KP N ++ F +D+ KE +
Sbjct: 398 KFHGEPQKPPMNGYHKFHQDSWSSKELQ 425
>gi|195489309|ref|XP_002092681.1| GE11532 [Drosophila yakuba]
gi|194178782|gb|EDW92393.1| GE11532 [Drosophila yakuba]
Length = 726
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKE 107
KPK+ T + + R I NP IK+ E+ K E WK++ +K + E+ AK+K+
Sbjct: 554 KPKRATTAFMLWLNDTRESIKRDNPGIKVTEIAKKGGEMWKEL--KDKSKWEDAAAKDKQ 611
Query: 108 IYAQNVKKYHDELT---PEAIEFLRKEKEVKKQKKEKRE 143
+YHDE+ PEA EK K KK K E
Sbjct: 612 -------RYHDEMRNYKPEAGGGSDNEKGGKSTKKRKTE 643
>gi|6323717|ref|NP_013788.1| Abf2p [Saccharomyces cerevisiae S288c]
gi|398988|sp|Q02486.1|ABF2_YEAST RecName: Full=ARS-binding factor 2, mitochondrial; Flags: Precursor
gi|763019|emb|CAA88797.1| Abf2p [Saccharomyces cerevisiae]
gi|2815294|emb|CAA11146.1| cisplatin-damaged DNA recognition protein CDRP1 [Saccharomyces
cerevisiae]
gi|45269826|gb|AAS56293.1| YMR072W [Saccharomyces cerevisiae]
gi|151946230|gb|EDN64461.1| ARS-binding factor [Saccharomyces cerevisiae YJM789]
gi|190408303|gb|EDV11568.1| ARS-binding factor 2, mitochondrial precursor [Saccharomyces
cerevisiae RM11-1a]
gi|207342356|gb|EDZ70142.1| YMR072Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273496|gb|EEU08430.1| Abf2p [Saccharomyces cerevisiae JAY291]
gi|259148645|emb|CAY81890.1| Abf2p [Saccharomyces cerevisiae EC1118]
gi|285814075|tpg|DAA09970.1| TPA: Abf2p [Saccharomyces cerevisiae S288c]
gi|323303592|gb|EGA57383.1| Abf2p [Saccharomyces cerevisiae FostersB]
gi|323336275|gb|EGA77546.1| Abf2p [Saccharomyces cerevisiae Vin13]
gi|323347161|gb|EGA81436.1| Abf2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323353057|gb|EGA85357.1| Abf2p [Saccharomyces cerevisiae VL3]
gi|349580353|dbj|GAA25513.1| K7_Abf2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763798|gb|EHN05324.1| Abf2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392297232|gb|EIW08332.1| Abf2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 183
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 26/148 (17%)
Query: 1 MALFKLTTGVF--TGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFK 58
M + L T F + +FNL S L+ A + Q L I + PK+P + YF
Sbjct: 1 MNSYSLLTRSFHESSKPLFNLASTLL-------KASKRTQLRNEL-IKQGPKRPTSAYFL 52
Query: 59 FQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGE-------AEKKRLENEYAKEKEIYAQ 111
+ R++ ++ NP ++ E++K+ E+W+ + +E+K+L +EY K K
Sbjct: 53 YLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSEYQKAK----- 107
Query: 112 NVKKYHDELTPE--AIEFLRKEKEVKKQ 137
K++ ++L P+ A F++ EV+ Q
Sbjct: 108 --KEFDEKLPPKKPAGPFIKYANEVRSQ 133
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 38/61 (62%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP P+ K+ ++R+++ ++P+ +++ K++ ++W+ + ++ K + EY K +
Sbjct: 116 PKKPAGPFIKYANEVRSQVFAQHPDKSQLDLMKIIGDKWQSLDQSIKDKYIQEYKKAIQE 175
Query: 109 Y 109
Y
Sbjct: 176 Y 176
>gi|402585705|gb|EJW79644.1| HMG box family protein, partial [Wuchereria bancrofti]
Length = 140
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%)
Query: 38 QTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKR 97
Q++ P + ++PL Y F Q R K++ NPN+K+ E ++++ E+WK + E EK++
Sbjct: 67 QSASPADDHQFIRRPLNAYMIFTKQERKKLLALNPNMKMHEASRIMGEKWKNMSEKEKRQ 126
>gi|289742511|gb|ADD20003.1| high mobility group protein D [Glossina morsitans morsitans]
Length = 110
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+ +KPK+PL+ Y + R +I NP I++ E+ K E W+ + +K E + AK
Sbjct: 1 MTDKPKRPLSAYMLWLSSAREQIKRENPGIRVTEIAKKGGEIWRSM--KDKSEWEAKAAK 58
Query: 105 EKEIYAQNVKKYH 117
KE Y VK++
Sbjct: 59 AKEDYEDAVKEFE 71
>gi|71012570|ref|XP_758511.1| hypothetical protein UM02364.1 [Ustilago maydis 521]
gi|46098169|gb|EAK83402.1| hypothetical protein UM02364.1 [Ustilago maydis 521]
Length = 125
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 31 TTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKI 90
++ +++T++ P+ PK+PL+ Y F R ++ NP EV +L+ +WK++
Sbjct: 36 SSTSTQKRTTKAKKDPDAPKRPLSAYMFFSQDQRERVKNANPEAGFGEVGRLLGAKWKEM 95
Query: 91 GEAEKK 96
EAEKK
Sbjct: 96 SEAEKK 101
>gi|335292597|ref|XP_003356765.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Sus scrofa]
Length = 597
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 197 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 256
Query: 106 KEIYAQNVKKYHD----ELTPEAIEF 127
K+ Y + + Y D + T E +E
Sbjct: 257 KKEYLKALAAYKDNQECQATVETVEL 282
>gi|395526464|ref|XP_003765383.1| PREDICTED: high mobility group protein B4 [Sarcophilus harrisii]
Length = 207
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PK+P + +F F + KI NP+ +++V KL+ E W K E +K+ E + A+
Sbjct: 93 PKAPKRPPSSFFLFSREHYTKIKSDNPHWSVVQVAKLLGEMWSKKSEQDKQPYEEKAARL 152
Query: 106 KEIYAQNVKKY 116
+ Y Q + Y
Sbjct: 153 RAKYHQELMTY 163
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPN--IKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
KPK L+ Y F RNK E+ PN I E +K SE+WK I + EK + E +
Sbjct: 7 KPKVNLSSYVHFLLNCRNKHKEQQPNAYINFKEFSKRCSEKWKTISKHEKSKYEAIARLD 66
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFI 165
K Y + +K Y + P ++ ++ K+ K PK+P +SF+LF
Sbjct: 67 KARYQKEMKNY---VPPVGMKKRKRRKKDPKA----------------PKRPPSSFFLFS 107
Query: 166 KDNIDK 171
+++ K
Sbjct: 108 REHYTK 113
>gi|312082315|ref|XP_003143394.1| hypothetical protein LOAG_07813 [Loa loa]
gi|307761443|gb|EFO20677.1| hypothetical protein LOAG_07813 [Loa loa]
Length = 143
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%)
Query: 38 QTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKR 97
Q++ P + ++PL Y F Q R K++ NPN+K+ E ++++ E+WK + E EK++
Sbjct: 67 QSASPADDHQFIRRPLNAYMIFTKQERKKLLALNPNMKMHEASRIMGEKWKNMSEKEKRQ 126
>gi|387016392|gb|AFJ50315.1| High mobility group protein B1 [Crotalus adamanteus]
Length = 215
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 36 KQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK 95
K ++ + P PK+P + +F F + R KI +P + I +V K + E W +K
Sbjct: 82 KGESKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTSSEDK 141
Query: 96 KRLENEYAKEKEIYAQNVKKYHDELTPEAI 125
+ E + K KE Y +++ Y + P+A
Sbjct: 142 QPFEKKAGKLKEKYEKDIAAYRAKGKPDAA 171
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 23/122 (18%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPN--IKIIEVTKLVSEEWKKIGEAEKKRLENEYA 103
P+KP+ ++ Y F R + +++P+ + E +K SE WK + EK + E+
Sbjct: 6 PKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAR 65
Query: 104 KEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYL 163
+K +R E+E+K K E KK F++ PK+P ++F+L
Sbjct: 66 ADK---------------------VRYEREMKTYVPPKGESKKKFKDPNAPKRPPSAFFL 104
Query: 164 FI 165
F
Sbjct: 105 FC 106
>gi|168021929|ref|XP_001763493.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685286|gb|EDQ71682.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 20/132 (15%)
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIY 109
KKP T + + R K+ E NPN E++ ++ ++WK + E E+K E+ Y EK +Y
Sbjct: 145 KKPKTAFLLWCKDYRQKVCEENPNATFAEISTILGDKWKNVPEEERKPYEDRYKVEKNVY 204
Query: 110 AQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFR---ETG-------------- 152
+ V + E EA++ +E+ KKQ +E E ++ E+G
Sbjct: 205 LKLVGEERRET--EALKLFHEEQN-KKQAQELLEQYLAYKKETESGSDKKKKYVKEKDPL 261
Query: 153 KPKKPGNSFYLF 164
+PK P ++F+ F
Sbjct: 262 RPKHPISAFFAF 273
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +PK P++ +F F R ++E N + E+ K++ EEWK + +++ E AKE
Sbjct: 260 PLRPKHPISAFFAFSQSRRPALLEENK--PVTEIAKILGEEWKSMSPSKRAPFEEIAAKE 317
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGK 153
KE Y+ ++ Y E + L +E E +K K EK + KL++E K
Sbjct: 318 KERYSVELETYKKN-KAEDLSTLDREAE-EKSKLEKAQALKLYKEKEK 363
>gi|321474042|gb|EFX85008.1| hypothetical protein DAPPUDRAFT_314512 [Daphnia pulex]
Length = 536
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 44/73 (60%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P++PKKPLT Y F + ++ ++++ P + + E+ ++++ + K+ + +K KE
Sbjct: 146 PDQPKKPLTSYLLFYMKQKDAVLKKQPGLGMTELNTIIAKMYHKLSDQKKTEYSELAKKE 205
Query: 106 KEIYAQNVKKYHD 118
KE Y + +KK+ D
Sbjct: 206 KEAYQEKMKKFMD 218
>gi|86563467|ref|NP_497613.2| Protein SWSN-3 [Caenorhabditis elegans]
gi|373220604|emb|CCD73870.1| Protein SWSN-3 [Caenorhabditis elegans]
Length = 338
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 41/71 (57%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ P++PL PY ++ ++ K+ NP ++ ++ K++ + W + + EK ++EY E
Sbjct: 23 PKVPERPLQPYMRYSRKMWPKVRAENPEAQLWDIGKMIGKYWLDLPDGEKSHYQHEYELE 82
Query: 106 KEIYAQNVKKY 116
K Y + +K +
Sbjct: 83 KADYEKQMKHF 93
>gi|395839552|ref|XP_003792652.1| PREDICTED: TOX high mobility group box family member 3 [Otolemur
garnettii]
Length = 782
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 465 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 524
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 525 KKEYLKALAAYRASL 539
>gi|348538096|ref|XP_003456528.1| PREDICTED: high mobility group protein B2-like [Oreochromis
niloticus]
Length = 196
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F R KI E NP I I ++ K + E W +K E + A+
Sbjct: 92 PNAPKRPPSAFFVFCSDHRPKIKEDNPGISIGDIAKKLGEMWATQSAKDKAPYEAKAARL 151
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 152 KEKYEKDVAAY 162
>gi|426232808|ref|XP_004010412.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Ovis aries]
Length = 619
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD 118
K+ Y + + Y D
Sbjct: 280 KKEYLKALAAYKD 292
>gi|440902096|gb|ELR52939.1| TOX high mobility group box family member 4, partial [Bos grunniens
mutus]
Length = 625
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD 118
K+ Y + + Y D
Sbjct: 280 KKEYLKALAAYKD 292
>gi|189409081|ref|NP_001121587.1| transcription factor Ci-HMG20 [Ciona intestinalis]
gi|198430268|ref|XP_002119172.1| PREDICTED: hypothetical protein [Ciona intestinalis]
gi|70569846|dbj|BAE06488.1| transcription factor protein [Ciona intestinalis]
Length = 292
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK 95
PKKPL+ Y +F R+++++ N ++ ++TKL+ EEW + +EK
Sbjct: 39 PKKPLSGYVRFMNSRRDQVLQENRSLSFADITKLLGEEWTNMSLSEK 85
>gi|343427904|emb|CBQ71429.1| related to NHP6B-nonhistone chromosomal protein [Sporisorium
reilianum SRZ2]
Length = 252
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
L P+ PK+P + Y FQ ++R +I +++P + EV VSE WK + + E++R+ +
Sbjct: 167 LRDPDAPKRPPSAYLLFQNEVRQEIRKKHPGMPYSEVLGKVSEAWKALTD-EQRRVYQDK 225
Query: 103 AKEKEIYAQNVKKYHD 118
E + KK H+
Sbjct: 226 TTENMVTWNQQKKDHE 241
>gi|302797885|ref|XP_002980703.1| hypothetical protein SELMODRAFT_38818 [Selaginella moellendorffii]
gi|300151709|gb|EFJ18354.1| hypothetical protein SELMODRAFT_38818 [Selaginella moellendorffii]
Length = 83
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 44 SIPEKPKKPLTPYFKFQGQIRNKIMERNPNIK-IIEVTKLVSEEWKKIGEAEKKRLENEY 102
+ P +PK+P T +F F + R +++PNIK + V K + WK++ E EKK ++
Sbjct: 6 ADPNQPKRPATAFFVFLEEYRKTFKDKHPNIKGVAAVGKAGGDAWKRLTEEEKKPYHDKA 65
Query: 103 AKEKEIYAQNVKKY 116
A++K Y + + +Y
Sbjct: 66 AQKKADYEKTLTEY 79
>gi|115496600|ref|NP_001069175.1| TOX high mobility group box family member 4 [Bos taurus]
gi|122143247|sp|Q0P5K4.1|TOX4_BOVIN RecName: Full=TOX high mobility group box family member 4
gi|112362021|gb|AAI19930.1| TOX high mobility group box family member 4 [Bos taurus]
gi|296483369|tpg|DAA25484.1| TPA: epidermal Langerhans cell protein LCP1 [Bos taurus]
Length = 619
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 279
Query: 106 KEIYAQNVKKYHD 118
K+ Y + + Y D
Sbjct: 280 KKEYLKALAAYKD 292
>gi|24657284|ref|NP_726109.1| high mobility group protein D, isoform A [Drosophila melanogaster]
gi|24657287|ref|NP_726110.1| high mobility group protein D, isoform B [Drosophila melanogaster]
gi|281363985|ref|NP_001163244.1| high mobility group protein D, isoform C [Drosophila melanogaster]
gi|195346535|ref|XP_002039813.1| GM15859 [Drosophila sechellia]
gi|195585534|ref|XP_002082536.1| GD11622 [Drosophila simulans]
gi|729733|sp|Q05783.1|HMGD_DROME RecName: Full=High mobility group protein D; Short=HMG-D
gi|157626|gb|AAA28609.1| high mobility group protein [Drosophila melanogaster]
gi|296943|emb|CAA50468.1| Hmg-D protein [Drosophila melanogaster]
gi|7291330|gb|AAF46759.1| high mobility group protein D, isoform A [Drosophila melanogaster]
gi|21392016|gb|AAM48362.1| LD24628p [Drosophila melanogaster]
gi|21645449|gb|AAM71011.1| high mobility group protein D, isoform B [Drosophila melanogaster]
gi|116805826|emb|CAL26283.1| CG17950 [Drosophila melanogaster]
gi|116805828|emb|CAL26284.1| CG17950 [Drosophila melanogaster]
gi|116805830|emb|CAL26285.1| CG17950 [Drosophila melanogaster]
gi|116805832|emb|CAL26286.1| CG17950 [Drosophila melanogaster]
gi|116805834|emb|CAL26287.1| CG17950 [Drosophila melanogaster]
gi|116805836|emb|CAL26288.1| CG17950 [Drosophila melanogaster]
gi|116805838|emb|CAL26289.1| CG17950 [Drosophila melanogaster]
gi|116805840|emb|CAL26290.1| CG17950 [Drosophila melanogaster]
gi|116805842|emb|CAL26291.1| CG17950 [Drosophila melanogaster]
gi|116805844|emb|CAL26292.1| CG17950 [Drosophila melanogaster]
gi|116805846|emb|CAL26293.1| CG17950 [Drosophila melanogaster]
gi|116805848|emb|CAL26294.1| CG17950 [Drosophila simulans]
gi|194135162|gb|EDW56678.1| GM15859 [Drosophila sechellia]
gi|194194545|gb|EDX08121.1| GD11622 [Drosophila simulans]
gi|220943924|gb|ACL84505.1| HmgD-PA [synthetic construct]
gi|220953800|gb|ACL89443.1| HmgD-PA [synthetic construct]
gi|223967235|emb|CAR93348.1| CG17950-PA [Drosophila melanogaster]
gi|223967237|emb|CAR93349.1| CG17950-PA [Drosophila melanogaster]
gi|223967239|emb|CAR93350.1| CG17950-PA [Drosophila melanogaster]
gi|223967241|emb|CAR93351.1| CG17950-PA [Drosophila melanogaster]
gi|223967243|emb|CAR93352.1| CG17950-PA [Drosophila melanogaster]
gi|223967245|emb|CAR93353.1| CG17950-PA [Drosophila melanogaster]
gi|223967247|emb|CAR93354.1| CG17950-PA [Drosophila melanogaster]
gi|223967249|emb|CAR93355.1| CG17950-PA [Drosophila melanogaster]
gi|223967251|emb|CAR93356.1| CG17950-PA [Drosophila melanogaster]
gi|223967253|emb|CAR93357.1| CG17950-PA [Drosophila melanogaster]
gi|223967255|emb|CAR93358.1| CG17950-PA [Drosophila melanogaster]
gi|223967257|emb|CAR93359.1| CG17950-PA [Drosophila melanogaster]
gi|272432624|gb|ACZ94516.1| high mobility group protein D, isoform C [Drosophila melanogaster]
Length = 112
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+ +KPK+PL+ Y + R I NP IK+ EV K E W+ + +K E + AK
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAK 58
Query: 105 EKEIYAQNVKKYH 117
K+ Y + VK++
Sbjct: 59 AKDDYDRAVKEFE 71
>gi|313219464|emb|CBY30388.1| unnamed protein product [Oikopleura dioica]
gi|313230769|emb|CBY08167.1| unnamed protein product [Oikopleura dioica]
Length = 456
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 44/72 (61%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ P+KP+ P+ ++ + + + NP++++ E++K ++ W++ + E++ Y E
Sbjct: 45 PKMPEKPVAPFVRYSQKHWDTVKTNNPDMRMWEISKFIARMWREAADEERETFIQAYEYE 104
Query: 106 KEIYAQNVKKYH 117
K+ Y + VK+Y+
Sbjct: 105 KKQYHELVKRYY 116
>gi|425767422|gb|EKV05996.1| Non-histone chromosomal protein 6 [Penicillium digitatum PHI26]
gi|425779648|gb|EKV17689.1| Non-histone chromosomal protein 6 [Penicillium digitatum Pd1]
Length = 189
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F R+K+ E NP I +V K + ++WK + E ++K + + A +
Sbjct: 106 PNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKQLGDKWKALSETDRKPYDAKAAAD 165
Query: 106 KEIYAQNVKKY 116
K+ Y + Y
Sbjct: 166 KKRYEEEKAAY 176
>gi|391325154|ref|XP_003737104.1| PREDICTED: high mobility group protein 20A-like [Metaseiulus
occidentalis]
Length = 391
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 41/68 (60%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK P+ Y +F + R + + NP + +TKL+++EW ++ + +K++ + K++E
Sbjct: 107 PKAPINGYVRFLNENRERCRKVNPEVAFANITKLLAQEWSQLKQEDKQKYLDAAEKDRER 166
Query: 109 YAQNVKKY 116
Y + V++Y
Sbjct: 167 YMKEVEEY 174
>gi|342874398|gb|EGU76412.1| hypothetical protein FOXB_13090 [Fusarium oxysporum Fo5176]
Length = 102
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 24 MPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLV 83
MP + G ++T + P PK+ L+ Y F + R + E NP I +V KL+
Sbjct: 1 MPKA-AAGKRGKAEKTKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLL 59
Query: 84 SEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYH 117
E WK + E ++ E + A +K+ Y + Y+
Sbjct: 60 GERWKALNEKQRAPYEAKAAADKKRYEDEKQAYN 93
>gi|351700745|gb|EHB03664.1| High mobility group protein 20A [Heterocephalus glaber]
Length = 570
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
P+ P T Y F + R+++ + P++ E+TK+++ +W ++ + K+R E ++K+
Sbjct: 231 PRAPTTGYVIFLNEQRSQLRAKYPDLPFTEITKILAAQWAQLSQERKQRYIYEADEDKQR 290
Query: 109 YAQNVKKYHDELTPEAIEFLRK 130
Y + ++ Y A FLR+
Sbjct: 291 YIRELQAYQSSEAYRA--FLRR 310
>gi|315051466|ref|XP_003175107.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
gi|311340422|gb|EFQ99624.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
Length = 102
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 24 MPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLV 83
MP S TT K+ + P PK+ L+ Y F + R + E NP+I +V K++
Sbjct: 1 MPKEKS-TTRKTKRGVEKKKKDPNAPKRGLSAYMIFANEQRASVREENPSITFGQVGKVL 59
Query: 84 SEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPE 123
E WK + + ++K E + A +K+ Y Y+ L E
Sbjct: 60 GERWKALTDKQRKPYEEKAATDKQRYEDEKAAYNSRLEEE 99
>gi|302411796|ref|XP_003003731.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|261357636|gb|EEY20064.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|346978438|gb|EGY21890.1| nucleosome binding protein [Verticillium dahliae VdLs.17]
Length = 102
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 24 MPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLV 83
MP + AG K+ + P PK+ L+ Y F + R + E NP I +V KL+
Sbjct: 1 MPKAAAKRGAGEKK-AKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLL 59
Query: 84 SEEWKKIGE-----------AEKKRLENEYA 103
E WK + E A+KKR E+E A
Sbjct: 60 GERWKALNEKQRGPYEAKAVADKKRYEDEKA 90
>gi|157129265|ref|XP_001655340.1| high mobility group non-histone protein, putative [Aedes aegypti]
gi|157129267|ref|XP_001655341.1| high mobility group non-histone protein, putative [Aedes aegypti]
gi|157129269|ref|XP_001655342.1| high mobility group non-histone protein, putative [Aedes aegypti]
gi|157129271|ref|XP_001655343.1| high mobility group non-histone protein, putative [Aedes aegypti]
gi|94468770|gb|ABF18234.1| nucleosome-binding factor SPN POB3 subunit [Aedes aegypti]
gi|108872275|gb|EAT36500.1| AAEL011414-PC [Aedes aegypti]
gi|108872276|gb|EAT36501.1| AAEL011414-PD [Aedes aegypti]
gi|108872277|gb|EAT36502.1| AAEL011414-PA [Aedes aegypti]
gi|108872278|gb|EAT36503.1| AAEL011414-PB [Aedes aegypti]
Length = 112
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+ EKPK+PL+ Y + R +I + NP IK+ E+ K E W+ + +K EN+ AK
Sbjct: 1 MAEKPKRPLSAYMLWLNSAREQIKKENPGIKVTEIAKRGGELWRAM--KDKSEWENKAAK 58
Query: 105 EKEIYAQNVKKYH 117
K+ Y + V+++
Sbjct: 59 MKDEYNKAVQEFE 71
>gi|443895134|dbj|GAC72480.1| HMG box-containing protein [Pseudozyma antarctica T-34]
Length = 99
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 31 TTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKI 90
++ +++T++ P PK+PL+ Y F R ++ + NP +V +L+ +WK++
Sbjct: 10 SSTSTQKRTTKSKKDPAAPKRPLSAYMFFSQDHRERVKQANPEAGFGDVGRLLGAKWKEM 69
Query: 91 GEAEKK 96
EAEKK
Sbjct: 70 SEAEKK 75
>gi|323332044|gb|EGA73455.1| Abf2p [Saccharomyces cerevisiae AWRI796]
Length = 139
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 26/148 (17%)
Query: 1 MALFKLTTGVF--TGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFK 58
M + L T F + +FNL S L+ A + Q L I + PK+P + YF
Sbjct: 1 MNSYSLLTRSFHESSKPLFNLASTLL-------KASKRTQLRNEL-IKQGPKRPTSAYFL 52
Query: 59 FQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGE-------AEKKRLENEYAKEKEIYAQ 111
+ R++ ++ NP ++ E++K+ E+W+ + +E+K+L +EY K K
Sbjct: 53 YLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSEYQKAK----- 107
Query: 112 NVKKYHDELTPE--AIEFLRKEKEVKKQ 137
K++ ++L P+ A F++ EV+ Q
Sbjct: 108 --KEFDEKLPPKKPAGPFIKYANEVRSQ 133
>gi|426232810|ref|XP_004010413.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Ovis aries]
Length = 596
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 197 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 256
Query: 106 KEIYAQNVKKYHD 118
K+ Y + + Y D
Sbjct: 257 KKEYLKALAAYKD 269
>gi|384247648|gb|EIE21134.1| SSrecog-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 659
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKK L+ + F R+++ + NP+I EV K + ++WK I EK + + K+K
Sbjct: 564 PKKALSAFMFFSSAKRDEVKKENPDISFGEVGKALGDKWKNISATEKAKYDEMAKKDKVR 623
Query: 109 YAQNVKKY 116
YA+ + Y
Sbjct: 624 YAKAKEAY 631
>gi|145477801|ref|XP_001424923.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391990|emb|CAK57525.1| unnamed protein product [Paramecium tetraurelia]
Length = 281
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 44/74 (59%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
+ +PEKPKKP++ + + R E NP+ +VTK + +++ ++ E+K+ ++E+
Sbjct: 94 MEVPEKPKKPVSGCLVYIAENRRAYSEENPDSSFGQVTKALVDQYNRLSNKERKKYDDEF 153
Query: 103 AKEKEIYAQNVKKY 116
K+ E+Y + + +
Sbjct: 154 EKKLELYHKQMDDW 167
>gi|260945453|ref|XP_002617024.1| hypothetical protein CLUG_02468 [Clavispora lusitaniae ATCC 42720]
gi|238848878|gb|EEQ38342.1| hypothetical protein CLUG_02468 [Clavispora lusitaniae ATCC 42720]
Length = 275
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIM-ER----NPNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT Y +F +R ++ ER P IE+ +++++ W K+ ++EK++L+
Sbjct: 106 PNAPKKPLTSYLRFNLSVREEMKKERFENGQPCHPAIELNQIIADRWSKLKDSEKEKLQK 165
Query: 101 EYAKEKEIYAQNVKKYH 117
+ + E Y + ++KY+
Sbjct: 166 AWEADYEEYKKAMEKYN 182
>gi|391346163|ref|XP_003747348.1| PREDICTED: nucleolar transcription factor 1-like [Metaseiulus
occidentalis]
Length = 811
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
L P+ PKKPLTPY ++ + ER P + E +K ++E+W + E ++++L++ +
Sbjct: 216 LKHPDLPKKPLTPYMRYLVDKLKIVKERYPELSHGEASKQITEKWHSLSEEKRQKLKDVF 275
Query: 103 AKEKEIYAQNVKKYHDELTPEA 124
E Y + ++++H + PEA
Sbjct: 276 DSEMVEYQRKLEQFHRD-HPEA 296
>gi|6730529|pdb|1QRV|A Chain A, Crystal Structure Of The Complex Of Hmg-D And Dna
gi|6730530|pdb|1QRV|B Chain B, Crystal Structure Of The Complex Of Hmg-D And Dna
Length = 73
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+KPK+PL+ Y + R I NP IK+ EV K E W+ + +K E + AK K
Sbjct: 2 DKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAK 59
Query: 107 EIYAQNVKKYH 117
+ Y + VK++
Sbjct: 60 DDYDRAVKEFE 70
>gi|50286583|ref|XP_445720.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525026|emb|CAG58639.1| unnamed protein product [Candida glabrata]
Length = 274
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 38 QTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGE 92
Q +P+ P PKKPLT +F + +R ++ + P + E+T+ +S++WK + +
Sbjct: 110 QKKKPVRDPNAPKKPLTVFFAYSAYVRQELRDARAQAGLPPLSSTEITQEISKKWKNLSD 169
Query: 93 AEKKRLENEYAKEKEIYAQNVKKY 116
EK++ + Y E E Y +KY
Sbjct: 170 EEKEKWKQAYNVELENYQVEKQKY 193
>gi|365761442|gb|EHN03096.1| Hmo1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401838321|gb|EJT42013.1| HMO1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 246
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F + +R ++ E P + E+T+ +S++WK++ + EK++ +
Sbjct: 103 PNAPKKPLTVFFAYSAYVRQELREDRQKAGLPPLSSTEITQEISKKWKELSDGEKEKWKQ 162
Query: 101 EYAKEKEIYAQNVKKY 116
Y E E Y + KY
Sbjct: 163 AYNVELENYQREKSKY 178
>gi|310793467|gb|EFQ28928.1| HMG box protein [Glomerella graminicola M1.001]
Length = 103
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%)
Query: 24 MPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLV 83
MP ++ A K + P PK+ L+ Y F + R + E NP I +V K++
Sbjct: 1 MPKASTKRGAAGKVDKKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKIL 60
Query: 84 SEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDE 119
E WK + + ++ E + A +K+ Y + Y+ E
Sbjct: 61 GERWKALNDKQRAPYEAKAATDKKRYEDEKQAYNAE 96
>gi|195486614|ref|XP_002091579.1| GE12173 [Drosophila yakuba]
gi|194177680|gb|EDW91291.1| GE12173 [Drosophila yakuba]
Length = 373
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 5/134 (3%)
Query: 26 HLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSE 85
H +S + LK+ + +++ PK PL Y +F R ++ P +E T+++ E
Sbjct: 53 HSDSDIGSELKKLAQRRINVAGAPKMPLNGYVRFMNDRREELRREQPQRTALEHTRIIGE 112
Query: 86 EWKKIGEAEKKRLENEYAKEKEIYAQNVK---KYHDELTPEAIEFLRKEKEVKKQKKEKR 142
EW ++ E K AK+K IY + ++ K H E+ A E + +K K K
Sbjct: 113 EWHQLPEERKVPYMEAAAKDKAIYQEQLQMFLKEHPEIV--ANELAKAKKATKPDSSPKE 170
Query: 143 EMKKLFRETGKPKK 156
+ K GK KK
Sbjct: 171 KTPKGESALGKAKK 184
>gi|151301198|ref|NP_001093087.1| mobility group protein 1B [Bombyx mori]
gi|95102634|gb|ABF51255.1| mobility group protein 1B [Bombyx mori]
Length = 119
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+ +KPK+P++ Y + R +I NP +++ E+ K E WK + +K E + AK
Sbjct: 1 MTDKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM--KDKTEWEQKAAK 58
Query: 105 EKEIYAQNVKKY 116
KE YA++++ Y
Sbjct: 59 AKEQYAKDLESY 70
>gi|71024155|ref|XP_762307.1| hypothetical protein UM06160.1 [Ustilago maydis 521]
gi|46101812|gb|EAK87045.1| hypothetical protein UM06160.1 [Ustilago maydis 521]
Length = 534
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
L P+ PK+P + Y FQ ++R +I +++P + EV VSE WK + + +++ +++
Sbjct: 291 LRDPDAPKRPPSAYLLFQNEVRQEIRKKHPGMPYSEVLGKVSEAWKALTDDQRRVYQDKT 350
Query: 103 AKEKEIYAQNVKKY-----------HDELTPEAIEFL 128
+ + Q K + H L +A+ F+
Sbjct: 351 TENMATWNQQKKDHEATMSQPGPLEHVHLASQAVLFV 387
>gi|145478879|ref|XP_001425462.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392532|emb|CAK58064.1| unnamed protein product [Paramecium tetraurelia]
Length = 275
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 52/85 (61%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
+ IPEKP+KP + + + R + +NP++ + ++TK +++++ + +KKR E+++
Sbjct: 94 MEIPEKPRKPASACLVYIAEHRKEYSNQNPDMNMAQLTKSLADKYGGLPNKDKKRYEDDF 153
Query: 103 AKEKEIYAQNVKKYHDELTPEAIEF 127
K+ E Y ++++ + + ++ EF
Sbjct: 154 QKKLEQYHKDIEIWQKKFAQKSEEF 178
>gi|24370476|emb|CAC70157.1| polybromodomain protein [Brugia malayi]
Length = 1933
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 26 HLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSE 85
H ++ T K+ + + P+ + + Y F ++R K+M+ NP+ EV+K+V
Sbjct: 1487 HTSATTATPGKELVTWLAAQPKLNARSKSGYILFSAEVRKKVMQENPDAGFGEVSKIVGI 1546
Query: 86 EWKKIGEAEKKRLE 99
EWKK+ E +KK+ E
Sbjct: 1547 EWKKLSEEQKKQYE 1560
>gi|71980955|ref|NP_001021008.1| Protein PBRM-1, isoform a [Caenorhabditis elegans]
gi|18958139|emb|CAA96600.2| Protein PBRM-1, isoform a [Caenorhabditis elegans]
Length = 1883
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 13/80 (16%)
Query: 33 AGLKQQTSQPLSIPEKPKKP-----LTP--------YFKFQGQIRNKIMERNPNIKIIEV 79
A ++ QTS + P+ P +TP Y F ++R +IM NP+ EV
Sbjct: 1420 ATVQSQTSSVSTPPQHPSISAEMPIMTPKAVKSKSGYILFSAEVRKRIMHENPDAGFGEV 1479
Query: 80 TKLVSEEWKKIGEAEKKRLE 99
+K+V EWKK+ E +KK E
Sbjct: 1480 SKIVGIEWKKLSEEQKKHYE 1499
>gi|253314412|ref|NP_001156579.1| structure specific recognition protein-like [Acyrthosiphon pisum]
Length = 755
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKE 107
+PK+ T Y + + R +I NP I +++ K E WKK+ ++K + E + AK KE
Sbjct: 550 RPKRAATAYMIWFNEAREEIKSDNPGISFVDIAKKGGELWKKMSTSDKSKYEEKAAKSKE 609
Query: 108 IYAQNVKKY 116
Y + +K++
Sbjct: 610 EYIEAMKEF 618
>gi|403295522|ref|XP_003938690.1| PREDICTED: high mobility group protein B3-like [Saimiri boliviensis
boliviensis]
Length = 202
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P K+P + +F F + R KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 90 PNASKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKL 149
Query: 106 KEIYAQNVKKY 116
KE Y ++V Y
Sbjct: 150 KEKYEKDVADY 160
>gi|241674437|ref|XP_002400122.1| conserved hypothetical protein [Ixodes scapularis]
gi|215504185|gb|EEC13679.1| conserved hypothetical protein [Ixodes scapularis]
Length = 285
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ NP++K+ E+ K++ + W+++ + K+ ++Y EK Y +
Sbjct: 61 PLMPYMRYSRKVWDQVKATNPDLKLWEIGKIIGQMWRELPDEAKQEYIDDYETEKMEYNE 120
Query: 112 NVKKYHDELTPEAIEFLRKEKEVKKQKKEKRE 143
+K YH + A + K +Q E+RE
Sbjct: 121 ALKSYH---SSPAYQAWVAAKVRAQQAAEERE 149
>gi|380476672|emb|CCF44585.1| non-histone chromosomal protein 6 [Colletotrichum higginsianum]
Length = 96
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%)
Query: 24 MPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLV 83
MP + A K + P PK+ L+ Y F + R + E NP I +V K++
Sbjct: 1 MPKAATKRGAAGKVDKKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKIL 60
Query: 84 SEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYH 117
E WK + E +++ E + A +K+ Y + Y+
Sbjct: 61 GERWKALNEKQRQPYEAKAATDKKRYEDEKQAYN 94
>gi|323508364|emb|CBQ68235.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 979
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKE 107
KPK+PL+ Y F +R +NP++ + E+T ++ EW+++ A++ R E E A ++
Sbjct: 367 KPKRPLSAYLLFVNSVRPARQAQNPDMPLTELTAEMAAEWRELAPAQRTRWEAEAALLRQ 426
Query: 108 IYAQNVKKYH------DELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKP 154
Y + + L PE + E+ + R K+ + KP
Sbjct: 427 QYDAALDAWKVAYPEGVSLGPEDESDMETSSEIGDDGQPVRRKKRRTTSSRKP 479
>gi|195123263|ref|XP_002006127.1| GI18728 [Drosophila mojavensis]
gi|193911195|gb|EDW10062.1| GI18728 [Drosophila mojavensis]
Length = 112
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 45 IPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
+ +KPK+PL+ Y + R I NP IK+ EV K E W+ + +K E + AK
Sbjct: 1 MADKPKRPLSAYMLWLNSAREGIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAK 58
Query: 105 EKEIYAQNVKKYH 117
K+ Y + VK +
Sbjct: 59 AKDDYDRAVKDFE 71
>gi|58258723|ref|XP_566774.1| HMG1 [Cryptococcus neoformans var. neoformans JEC21]
gi|134106799|ref|XP_777941.1| hypothetical protein CNBA4100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260641|gb|EAL23294.1| hypothetical protein CNBA4100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222911|gb|AAW40955.1| HMG1, putative [Cryptococcus neoformans var. neoformans JEC21]
Length = 895
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 74 IKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKE 133
+ + ++ K + + E KK + +EIYA+ + + LTPE I R E
Sbjct: 468 LNVAQIAKEAGVAYANLSEERKKYYAERVKEHREIYAKELAAWQATLTPEDI---RAENA 524
Query: 134 VK-KQKKEKREMKKLFRETGKPKKPGNSFYLFIK 166
+ +Q+KE + K ++ PKKP ++++LF+K
Sbjct: 525 FRAQQRKEGKSRKGNIKDPNAPKKPLSAYFLFLK 558
Score = 35.8 bits (81), Expect = 7.9, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 14/88 (15%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKI------IEVTK---LVSEEWKKIGEAEKK 96
P PKKPL+ YF F IR N +I+ E TK + +E+W+ + + EK+
Sbjct: 543 PNAPKKPLSAYFLFLKAIR-----ENSDIRAQVWGTEAETTKQSVMAAEKWRSLTDDEKR 597
Query: 97 RLENEYAKEKEIYAQNVKKYHDELTPEA 124
+ +K+ Y K+Y ++ A
Sbjct: 598 PYLEQAEHDKQTYETARKQYEEDSAARA 625
>gi|380014712|ref|XP_003691364.1| PREDICTED: uncharacterized protein LOC100865252 [Apis florea]
Length = 716
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ +NP +K+ E+ K++ + W+ + E +K EY EK Y +
Sbjct: 79 PLMPYMRYSRKVWDQVKAQNPELKLWEIGKIIGQMWRDLPEEDKTEFIEEYEAEKVEYEK 138
Query: 112 NVKKYHD 118
++K YH+
Sbjct: 139 SLKTYHN 145
>gi|308569654|gb|ADO34793.1| high mobility group box 2 protein [Gossypium hirsutum]
Length = 146
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 29 SVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNP-NIKIIEVTKLVSEEW 87
S T AG K + + P KPK+P + +F F + R + + +P N + V K ++W
Sbjct: 21 STTKAGKK--SGKAAKDPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKW 78
Query: 88 KKIGEAEKKRLENEYAKEKEIYAQNVKKYH 117
K + EAEK+ ++ K K Y +N+K Y+
Sbjct: 79 KSLSEAEKRPYVDKAEKRKVEYEKNMKAYN 108
>gi|296414868|ref|XP_002837119.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632969|emb|CAZ81310.1| unnamed protein product [Tuber melanosporum]
Length = 310
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKI-MERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAK 104
P PK+P+T Y F Q R+ + + PN ++ +++ W + E +KK ++ Y K
Sbjct: 87 PAMPKRPMTAYLLFCHQGRDTVKADLGPNATHKDILAELTKRWSETPEDQKKAWQDLYQK 146
Query: 105 EKEIYAQNVKKYHDELTPEAIE 126
+E+YA+++ Y P+A E
Sbjct: 147 NREVYAKDMALYKATKAPQAGE 168
>gi|167521095|ref|XP_001744886.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776500|gb|EDQ90119.1| predicted protein [Monosiga brevicollis MX1]
Length = 75
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +PKKPL Y ++ R +I + NP+ E++++ + WK++ + +K +LE ++ E
Sbjct: 1 PNRPKKPLRSYMRWFSANREQIKQDNPDASNTELSQIGGQRWKEVSQEDKDKLEEDFQSE 60
Query: 106 KEIYAQNVKKY 116
+ V Y
Sbjct: 61 LAEWETAVAAY 71
>gi|159162413|pdb|1HMA|A Chain A, The Solution Structure And Dynamics Of The Dna Binding
Domain Of Hmg-D From Drosophila Melanogaster
Length = 73
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+KPK+PL+ Y + R I NP IK+ EV K E W+ + +K E + AK K
Sbjct: 2 DKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAK 59
Query: 107 EIYAQNVKKYH 117
+ Y + VK++
Sbjct: 60 DDYDRAVKEFE 70
>gi|432878236|ref|XP_004073283.1| PREDICTED: FACT complex subunit SSRP1-like [Oryzias latipes]
Length = 706
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P++ Y + R +I NP I I E++K E W+ +G+ EK+ + + + K
Sbjct: 548 PKRPMSAYMLWLNSSRERIKAENPGISITEISKKAGEMWRGLGKDEKEEWDTKAGEAKRQ 607
Query: 109 YAQNVKKY 116
Y + K+Y
Sbjct: 608 YDKAKKEY 615
>gi|405117802|gb|AFR92577.1| hmg1 [Cryptococcus neoformans var. grubii H99]
Length = 907
Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 74 IKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKE 133
+ + ++ K + + E KK + +EIYA+ + + LTPE I R E
Sbjct: 480 LNVAQIAKEAGVAYANLSEERKKYYAERVKEHREIYAKELAAWQATLTPEDI---RAENA 536
Query: 134 VK-KQKKEKREMKKLFRETGKPKKPGNSFYLFIK 166
+ +Q+KE + K ++ PKKP ++++LF+K
Sbjct: 537 FRAQQRKEGKSRKGNIKDPNAPKKPLSAYFLFLK 570
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 14/88 (15%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKI------IEVTK---LVSEEWKKIGEAEKK 96
P PKKPL+ YF F IR N +I+ E TK + +E+W+ + + EK+
Sbjct: 555 PNAPKKPLSAYFLFLKAIR-----ENSDIRAQVWGTEAETTKQSVMAAEKWRSLTDDEKR 609
Query: 97 RLENEYAKEKEIYAQNVKKYHDELTPEA 124
+ +K+ Y K+Y ++ A
Sbjct: 610 PYLEQAEHDKQTYETARKQYEEDSAARA 637
>gi|402594818|gb|EJW88744.1| hypothetical protein WUBG_00348 [Wuchereria bancrofti]
Length = 479
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 7/58 (12%)
Query: 56 YFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLE-------NEYAKEK 106
Y F ++R K+M+ NP+ EV+K+V EWKK+ E +KK+ E NE AK++
Sbjct: 64 YILFSAEVRKKVMQENPDAGFGEVSKIVGIEWKKLSEEQKKQYEIRAEYIANERAKQE 121
>gi|331220978|ref|XP_003323164.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309302154|gb|EFP78745.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 106
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 28 NSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEW 87
N V T +K++ P PK+PL+ Y F R +I NP++ E+ +L+ +W
Sbjct: 20 NPVKTKRVKKEKD-----PNAPKRPLSAYMYFSQDWRERIKTENPDVSFGEIGRLLGLKW 74
Query: 88 KKIGEAEKKRLENEYAKEK 106
K + E EKK E+ +++K
Sbjct: 75 KGLSEEEKKPYEDMASRDK 93
>gi|363751739|ref|XP_003646086.1| hypothetical protein Ecym_4194 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889721|gb|AET39269.1| hypothetical protein Ecym_4194 [Eremothecium cymbalariae
DBVPG#7215]
Length = 250
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F + +R + E P + E+T+ +S++WK++ ++EK + +
Sbjct: 103 PNAPKKPLTVFFAYSAYVRQALREERQRAGLPPLSSTEITQEISKKWKELSDSEKDKWKQ 162
Query: 101 EYAKEKEIYAQNVKKY 116
Y E Y + +KY
Sbjct: 163 AYTTELGNYQREKQKY 178
>gi|302790391|ref|XP_002976963.1| hypothetical protein SELMODRAFT_175895 [Selaginella moellendorffii]
gi|300155441|gb|EFJ22073.1| hypothetical protein SELMODRAFT_175895 [Selaginella moellendorffii]
Length = 156
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIK-IIEVTKLVSEEWKKIGEAEKKRLENE 101
+ P +PK+P T +F F + R +++PNIK + V K + WK++ E EKK ++
Sbjct: 49 AADPNQPKRPATAFFVFLEEYRKTFKDKHPNIKGVAAVGKAGGDAWKRLTEEEKKPYHDK 108
Query: 102 YAKEKEIYAQNVKKY 116
A++K Y + + +Y
Sbjct: 109 AAQKKADYEKTLTEY 123
>gi|242064692|ref|XP_002453635.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor]
gi|241933466|gb|EES06611.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor]
Length = 488
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 28/141 (19%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK-------KRLENEYA 103
+P++ YF + + R ++ N+ E+ K+ EEWK + EA+K ++ + EY
Sbjct: 290 QPMSAYFVYSQERRAALVAEKKNVP--EIGKITGEEWKNMTEAQKAPYEKVARKQKEEYQ 347
Query: 104 KEKEIYAQNVKKYHDELT-------------PEAIEFLRKEKE----VKKQKKEKREMKK 146
K+ E+Y Q KK + + EA++ L+K+++ +KK K+ +++ K+
Sbjct: 348 KQMEVYKQ--KKIEEAASLEKEEEEHKKIMKQEALQLLKKKEKADNIIKKTKENRQKKKQ 405
Query: 147 LFRETGKPKKPGNSFYLFIKD 167
+ +PK+P +SF LF K+
Sbjct: 406 ENADPNRPKRPASSFLLFSKE 426
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 34/61 (55%)
Query: 36 KQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK 95
+Q+ Q + P +PK+P + + F + R +++E P I + L+S +WK++ E+
Sbjct: 400 RQKKKQENADPNRPKRPASSFLLFSKEARKQLLEERPGINNSSLNALISVKWKELSGEER 459
Query: 96 K 96
+
Sbjct: 460 Q 460
>gi|401624276|gb|EJS42339.1| hmo1p [Saccharomyces arboricola H-6]
Length = 246
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F + +R ++ E P + E+T+ +S++WK++ + EK++ +
Sbjct: 103 PNAPKKPLTVFFAYSAYVRQELREDRQKAGLPPLSSTEITQEISKKWKELSDLEKEKWKQ 162
Query: 101 EYAKEKEIYAQNVKKY 116
Y E E Y + KY
Sbjct: 163 AYNVELENYQREKSKY 178
>gi|296471967|tpg|DAA14082.1| TPA: Putative upstream-binding factor 1-like protein 3/5-like [Bos
taurus]
Length = 423
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 45/68 (66%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PK+PLT Y F ++R + ++++P + E+TK++SEE++K+ E K + ++ KE
Sbjct: 112 PDLPKRPLTAYLLFFKEMRPQYLQKHPKMSNQELTKVLSEEYRKLPEHLKLKYSQDFQKE 171
Query: 106 KEIYAQNV 113
K+ + + +
Sbjct: 172 KQEFQEKM 179
>gi|71004578|ref|XP_756955.1| hypothetical protein UM00808.1 [Ustilago maydis 521]
gi|46095669|gb|EAK80902.1| hypothetical protein UM00808.1 [Ustilago maydis 521]
Length = 967
Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKE 107
KPK+PL+ Y F +R + +NPN + E+T ++ EW+++ A++ + E E + ++
Sbjct: 369 KPKRPLSAYLLFVNSVRPQRQAQNPNAPLTELTAEMAAEWRQLAPAQRTKWETEASLLRQ 428
Query: 108 IY 109
Y
Sbjct: 429 QY 430
>gi|358419552|ref|XP_003584270.1| PREDICTED: putative upstream-binding factor 1-like protein 3/5-like
[Bos taurus]
Length = 404
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 45/68 (66%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PK+PLT Y F ++R + ++++P + E+TK++SEE++K+ E K + ++ KE
Sbjct: 97 PDLPKRPLTAYLLFFKEMRPQYLQKHPKMSNQELTKVLSEEYRKLPEHLKLKYSQDFQKE 156
Query: 106 KEIYAQNV 113
K+ + + +
Sbjct: 157 KQEFQEKM 164
>gi|308158633|gb|EFO61203.1| Hypothetical protein GLP15_1136 [Giardia lamblia P15]
Length = 204
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 44 SIPE-KPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
+P+ KP KP TPYF F + ++ N+ E TK++ + WK++ E +K+ + Y
Sbjct: 4 DVPQAKPTKPFTPYFAFM----HDHLDEYKNVVPKERTKVLGQRWKELDEKTRKQYTDNY 59
Query: 103 AKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKK 146
++ +Y + +KK+ +E PE KEK +K+ K KK
Sbjct: 60 EEQTRLYKEAMKKWLEE-HPEDRPGTAKEKSIKRDVDAKERRKK 102
>gi|259145413|emb|CAY78677.1| Hmo1p [Saccharomyces cerevisiae EC1118]
Length = 246
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERN-----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F + +R ++ E P + E+T+ +S++WK++ + EK++ +
Sbjct: 103 PNAPKKPLTVFFAYSAYVRQEVREDRQKAGLPPLSSTEITQEISKKWKELSDNEKEKWKQ 162
Query: 101 EYAKEKEIYAQNVKKY 116
Y E E Y + KY
Sbjct: 163 AYNVELENYQREKSKY 178
>gi|397524101|ref|XP_003832048.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan paniscus]
Length = 130
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+PL+ +F F + KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 26 PNAPKRPLSGFFLFCSEFCPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKVAKL 85
Query: 106 KEIYAQNVKKY 116
K+ Y ++V Y
Sbjct: 86 KK-YEKDVADY 95
>gi|443727481|gb|ELU14222.1| hypothetical protein CAPTEDRAFT_191691 [Capitella teleta]
Length = 409
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKE 107
+P+ P T Y F + R +I + P + ++TK++ EW +G EK++ ++ +K
Sbjct: 147 QPRAPATGYMLFAYKRRQEIKDIEPKLAFRDITKILGNEWSSMGTEEKQKYLSDAENDK- 205
Query: 108 IYAQNVKKYHDEL-----TPEAIEFLRKEKEVKKQKKEKREM--KKLFRETGKPKKPGNS 160
K+Y DEL +P+ +EF++K K +K + E + E G + N
Sbjct: 206 ------KRYIDELDVYKKSPQYLEFVKKRK-IKITTDDPLEHLDNSTYEEVGLHCRLCN- 257
Query: 161 FYLFIKDNIDKKEY 174
L+ N +KKE+
Sbjct: 258 --LYFSSNHNKKEH 269
>gi|359080876|ref|XP_002707840.2| PREDICTED: Putative upstream-binding factor 1-like protein 3/5-like
[Bos taurus]
Length = 404
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 45/68 (66%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PK+PLT Y F ++R + ++++P + E+TK++SEE++K+ E K + ++ KE
Sbjct: 97 PDLPKRPLTAYLLFFKEMRPQYLQKHPKMSNQELTKVLSEEYRKLPEHLKLKYSQDFQKE 156
Query: 106 KEIYAQNV 113
K+ + + +
Sbjct: 157 KQEFQEKM 164
>gi|345319487|ref|XP_001520125.2| PREDICTED: TOX high mobility group box family member 3-like
[Ornithorhynchus anatinus]
Length = 780
Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 460 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 519
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 520 KKEYLKALAAYRASL 534
>gi|336385984|gb|EGO27130.1| hypothetical protein SERLADRAFT_381367 [Serpula lacrymans var.
lacrymans S7.9]
Length = 91
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 51 KPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYA 110
+P + Y FQ ++R K+ E+NP + E+ L+ W + + EK+R +E K KE Y
Sbjct: 1 RPASAYILFQNEVRAKLKEQNPELPQSELLSLIGRRWTSMSQQEKERYTSENIKAKEKY- 59
Query: 111 QNVKKYHD 118
Q+ K +D
Sbjct: 60 QSAKAAYD 67
>gi|297464807|ref|XP_001787586.2| PREDICTED: Putative upstream-binding factor 1-like protein 3/5-like
[Bos taurus]
Length = 404
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 45/68 (66%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PK+PLT Y F ++R + ++++P + E+TK++SEE++K+ E K + ++ KE
Sbjct: 97 PDLPKRPLTAYLLFFKEMRPQYLQKHPKMSNQELTKVLSEEYRKLPEHLKLKYSQDFQKE 156
Query: 106 KEIYAQNV 113
K+ + + +
Sbjct: 157 KQEFQEKM 164
>gi|119596659|gb|EAW76253.1| hCG2042470 [Homo sapiens]
Length = 118
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+PL+ +F F + KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 14 PNAPKRPLSGFFLFCSEFCPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKVAKL 73
Query: 106 KEIYAQNVKKY 116
K+ Y ++V Y
Sbjct: 74 KK-YEKDVADY 83
>gi|326927243|ref|XP_003209802.1| PREDICTED: TOX high mobility group box family member 3-like
[Meleagris gallopavo]
Length = 573
Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 250 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 309
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 310 KKEYLKALAAYRASL 324
>gi|255721761|ref|XP_002545815.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240136304|gb|EER35857.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 225
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKI-MERN----PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F+F +R +I +ER P++ I++ ++ E W I EK +
Sbjct: 83 PNAPKKPLTMFFQFSYDLRKQIGVERKRKDLPSLSAIDMNSMIKERWDNITAEEKAAYKK 142
Query: 101 EYAKEKEIYAQNVKKYHDELT 121
Y IY + KKY L
Sbjct: 143 RYDDAMIIYNEEKKKYETSLV 163
>gi|395505933|ref|XP_003757291.1| PREDICTED: TOX high mobility group box family member 3-like
[Sarcophilus harrisii]
Length = 572
Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 252 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 311
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 312 KKEYLKALAAYRASL 326
>gi|344300446|gb|EGW30767.1| Non-histone chromosomal protein 6 [Spathaspora passalidarum NRRL
Y-27907]
Length = 93
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 30 VTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKK 89
+ A K++ ++ P+ PK+ L+ Y F + R+ + NP I +V KL+ E+WK
Sbjct: 1 MAAAAEKRKATRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKA 60
Query: 90 IGEAEKKRLENE-------YAKEKEIYAQ 111
+ EK EN+ Y KEK YA+
Sbjct: 61 LTADEKVPYENKAETDKKRYEKEKAEYAK 89
>gi|195447812|ref|XP_002071381.1| GK25765 [Drosophila willistoni]
gi|194167466|gb|EDW82367.1| GK25765 [Drosophila willistoni]
Length = 784
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 8 TGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKI 67
T +FT N N P + +++ Q S+ P+ P+KP+ PY ++ ++ + +
Sbjct: 56 TPIFTHSNYGN--PAFTPQKVTKSSSSKNQNESRLPKPPKPPEKPILPYMRYSKRVWDSV 113
Query: 68 MERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEF 127
++P +K+ E+ K + WK++GE EK +EY EK Y + +K YH TP +
Sbjct: 114 KAQHPELKLWELGKKIGAMWKQLGEDEKLEFIDEYEAEKLEYEKALKAYHQ--TPAYQAY 171
Query: 128 LRKEKEVK 135
+ + +VK
Sbjct: 172 MSAKSKVK 179
>gi|170596932|ref|XP_001902949.1| polybromodomain protein, identical [Brugia malayi]
gi|158589049|gb|EDP28202.1| polybromodomain protein, identical [Brugia malayi]
Length = 508
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 7/58 (12%)
Query: 56 YFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLE-------NEYAKEK 106
Y F ++R K+M+ NP+ EV+K+V EWKK+ E +KK+ E NE AK++
Sbjct: 92 YILFSAEVRKKVMQENPDAGFGEVSKIVGIEWKKLSEEQKKQYEIRAEYIANERAKQE 149
>gi|145473781|ref|XP_001462554.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430394|emb|CAK95181.1| unnamed protein product [Paramecium tetraurelia]
Length = 123
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 43/70 (61%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P +F ++ ++ ++ + NP K+ ++TK++SE++K++ + + + E +Y K I
Sbjct: 12 PKRPQCAFFIYKQEVYQQVKDANPGKKMTDITKIISEQYKQLAKDKIDQYEQKYKDSKAI 71
Query: 109 YAQNVKKYHD 118
+ + K Y D
Sbjct: 72 FEKEKKAYED 81
>gi|357608069|gb|EHJ65806.1| hypothetical protein KGM_13851 [Danaus plexippus]
Length = 719
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PK+P T + + + R I++ NP IK+ E+ K E W+ + +K + E + K KE
Sbjct: 547 PKRPSTAFMLWLSEHRKGIIDDNPGIKVTEIAKKGGELWRDL--KDKTQWEEKANKAKEE 604
Query: 109 YAQNVKKYHD 118
Y Q +KKY D
Sbjct: 605 YNQAMKKYKD 614
>gi|332847763|ref|XP_003315517.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan troglodytes]
gi|397485725|ref|XP_003813991.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan paniscus]
Length = 207
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P + +F F + K NP I I +V K +SE WK + ++EK+ + AK
Sbjct: 89 PNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLSEMWKNLNDSEKQPYITQAAKL 148
Query: 106 KEIYAQNV 113
KE Y ++V
Sbjct: 149 KEKYEKDV 156
>gi|332026217|gb|EGI66359.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1 [Acromyrmex echinatior]
Length = 756
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ +NP +K+ E+ K++ + W+ + E +K EY EK Y +
Sbjct: 79 PLMPYMRYSRKVWDQVKAQNPELKLWEIGKIIGQMWRDLPEEDKTEFIEEYETEKVEYEK 138
Query: 112 NVKKYHD 118
++K YH+
Sbjct: 139 SLKTYHN 145
>gi|195565871|ref|XP_002105697.1| GD16931 [Drosophila simulans]
gi|194203897|gb|EDX17473.1| GD16931 [Drosophila simulans]
Length = 691
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 8 TGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKI 67
T +FT N N P + +++ Q S+ P+ P+KP+ PY ++ ++ + +
Sbjct: 50 TPIFTHSNYGN--PAFTPQKVTKSSSSKNQNESRLPKPPKPPEKPILPYMRYSKRVWDSV 107
Query: 68 MERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEF 127
++P +K+ E+ K + WK + E EK +EY EK Y +++K YH TP +
Sbjct: 108 KAKHPELKLWELGKKIGAMWKLLPEDEKTEFIDEYEAEKLEYEKSLKAYHQ--TPAYQAY 165
Query: 128 LRKEKEVK 135
+ + +VK
Sbjct: 166 MSAKSKVK 173
>gi|170591488|ref|XP_001900502.1| High mobility group protein 1.2 [Brugia malayi]
gi|158592114|gb|EDP30716.1| High mobility group protein 1.2, putative [Brugia malayi]
Length = 235
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ +F F R ++ +++P K+ +V + + WK +GE E+ E + ++
Sbjct: 112 PNAPKRALSAFFFFSHDKRPEVQQQHPEWKVGQVAQELGRFWKALGEEERAVYERKALED 171
Query: 106 KEIYAQNVKKY 116
KE YA+ ++ Y
Sbjct: 172 KERYAEEMRNY 182
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 71 NPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRK 130
N N+++ E++K SE+WK + + EK+R K+ E Y V Y E + LRK
Sbjct: 51 NENVQVTEISKKCSEKWKTMSDDEKRRFFELAQKDAERYQAEVAAYGGE------DALRK 104
Query: 131 EKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKD 167
K VKK + PK+ ++F+ F D
Sbjct: 105 RKRVKK-------------DPNAPKRALSAFFFFSHD 128
>gi|189442849|gb|AAI67799.1| TOX high mobility group box family member 3 [synthetic construct]
Length = 589
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 252 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 311
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 312 KKEYLKALAAYRASL 326
>gi|340710108|ref|XP_003393638.1| PREDICTED: hypothetical protein LOC100651274 [Bombus terrestris]
Length = 747
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ +++ +NP +K+ E+ K++ + W+ + E +K EY EK Y +
Sbjct: 79 PLMPYMRYSRKVWDQVKAQNPELKLWEIGKIIGQMWRDLPEEDKTEFIEEYEAEKVEYEK 138
Query: 112 NVKKYHD 118
++K YH+
Sbjct: 139 SLKTYHN 145
>gi|49250826|gb|AAH74541.1| Ssrp1 protein, partial [Xenopus (Silurana) tropicalis]
Length = 629
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P++ Y + R KI NP I I +++K E WK + + +K+ + +
Sbjct: 538 PSAPKRPMSAYMLWLNASREKIKSENPGISITDLSKKAGEIWKSMSKDKKEEWDRRAEEA 597
Query: 106 KEIYAQNVKKYHDELTPEA 124
K Y + +K+Y+ EA
Sbjct: 598 KRDYEKAMKEYNSSTPTEA 616
>gi|334311690|ref|XP_001371950.2| PREDICTED: TOX high mobility group box family member 3 [Monodelphis
domestica]
Length = 572
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 252 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 311
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 312 KKEYLKALAAYRASL 326
>gi|378755555|gb|EHY65581.1| hypothetical protein NERG_01188 [Nematocida sp. 1 ERTm2]
Length = 185
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 65/123 (52%), Gaps = 15/123 (12%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
PKKP T YF F +R+ P + + E TK++S+ W ++ +KK+ EYA+ +
Sbjct: 22 PKKPTTEYFMF---LRDARKTLQPGLSVKEQTKILSQAWSELAPEKKKKYSEEYAEAFKQ 78
Query: 109 YAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYLFIKDN 168
Y +++++Y T E + L++ K+ K +K + P+KP + + LF+++N
Sbjct: 79 YKEDLEEYKK--TDEYQDVLKQNKDQKAAGSKK---------STTPRKP-SGYNLFVREN 126
Query: 169 IDK 171
K
Sbjct: 127 SAK 129
>gi|260824573|ref|XP_002607242.1| hypothetical protein BRAFLDRAFT_130806 [Branchiostoma floridae]
gi|229292588|gb|EEN63252.1| hypothetical protein BRAFLDRAFT_130806 [Branchiostoma floridae]
Length = 334
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 23 LMPHLNSVTTA---GLKQQTSQPLS----IPEKPKKPLTPYFKFQGQIRNKIME-----R 70
++P S T A K++ QP S P PKKP +F F Q R+++ E
Sbjct: 156 MLPFPGSATMALQASSKKKHKQPKSEKEKDPNAPKKPANAFFMFCQQRRSQVQESYYKEH 215
Query: 71 NPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAI 125
I E+TK +++ W + +KKR + Y K+KE Y + +++Y P A
Sbjct: 216 KEEIGHHELTKRLAKSWNSLSSEDKKRYYDMYEKDKERYEREMREYTSNPAPAAA 270
>gi|339521847|gb|AEJ84088.1| TOX high mobility group box family member 4 [Capra hircus]
Length = 619
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 30 VTTAGLKQQTSQ--PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEW 87
V AG KQ+ + P +P+KP++ Y F + I +NPN EV+K+V+ W
Sbjct: 202 VVEAGKKQKAPKRRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMW 261
Query: 88 KKIGEAEKKRLENEYAKEKEIYAQNVKKYHD 118
+GE K+ + + K+ Y + + Y D
Sbjct: 262 DSLGEERKQVCKRKTEAAKKEYLKALAAYKD 292
>gi|195040272|ref|XP_001991037.1| GH12291 [Drosophila grimshawi]
gi|193900795|gb|EDV99661.1| GH12291 [Drosophila grimshawi]
Length = 796
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 8 TGVFTGGNVFNLRSCLMPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKI 67
T +FT N N P + +++ Q S+ P+ P+KP+ PY ++ ++ + +
Sbjct: 53 TPIFTHSNYGN--PAFTPQKVTKSSSNKTQSESRLPKPPKPPEKPILPYMRYSKRVWDSV 110
Query: 68 MERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEF 127
++P +K+ E+ K + WK++G+ EK +EY EK Y + +K YH TP +
Sbjct: 111 KAQHPELKLWELGKKIGAMWKQLGDDEKTEYIDEYEVEKLEYEKALKAYHQ--TPAYQAY 168
Query: 128 LRKEKEVK 135
+ + +VK
Sbjct: 169 ISAKSKVK 176
>gi|397567488|gb|EJK45616.1| hypothetical protein THAOC_35763 [Thalassiosira oceanica]
Length = 1829
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 41 QPLSI--PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRL 98
+PLS P PK+ ++ +F + R+ I + NP+ E+ KL+S ++K + E+
Sbjct: 70 EPLSHAHPSAPKQYMSAFFLYSEAKRDSIKQANPSASPQEIAKLLSRDFKAMASEERAYW 129
Query: 99 ENEYAKEKEIYAQNVKKYHDELT 121
+ + A++KE Y + ++ Y LT
Sbjct: 130 DKKAAEDKERYKREMENYDPTLT 152
>gi|392575401|gb|EIW68534.1| hypothetical protein TREMEDRAFT_32029 [Tremella mesenterica DSM
1558]
Length = 116
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F R KI +P++ E KL+ E+WK + AEKK E+ AK+
Sbjct: 28 PNAPKRGLSAYMFFVQDYRPKIKNDHPDVSFGETGKLLGEKWKAMSAAEKKPFEDLAAKD 87
Query: 106 KEIYAQNVKKY 116
K ++ K Y
Sbjct: 88 KLRAEKDKKAY 98
>gi|426382171|ref|XP_004057690.1| PREDICTED: TOX high mobility group box family member 3 [Gorilla
gorilla gorilla]
Length = 576
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 252 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 311
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 312 KKEYLKALAAYRASL 326
>gi|384493812|gb|EIE84303.1| hypothetical protein RO3G_09013 [Rhizopus delemar RA 99-880]
Length = 252
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+ PK+P + Y + IR + + P+ +E +K+ E WKK+ +AEKK KE
Sbjct: 58 PDFPKQPTSNYLFYCNSIRADVDKEFPSASFVEKSKIYGERWKKLSDAEKKPYNEMAQKE 117
Query: 106 KEIYAQNVKKY 116
KE Y + ++ Y
Sbjct: 118 KERYNRELETY 128
>gi|403332939|gb|EJY65527.1| hypothetical protein OXYTRI_14318 [Oxytricha trifallax]
Length = 772
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 42 PLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENE 101
P++ KPKKPL+ Y F + R I R P + +I+V K VS W + + +K E
Sbjct: 319 PINSENKPKKPLSAYIYFSQEFREIIRARYPTMTVIQVMKAVSYRWGNLSKEQKYPFEQM 378
Query: 102 YAKEKEIY 109
++K+ Y
Sbjct: 379 AVEDKQRY 386
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 41/73 (56%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKE 107
KPKK L+ Y F + R I++ +P + ++V + V ++W+ + E +K + + ++K
Sbjct: 147 KPKKCLSAYMIFVKETRPLIVDEHPEMGALQVMQEVGKQWQALTEEQKNYFKEKADRDKL 206
Query: 108 IYAQNVKKYHDEL 120
Y + ++DE+
Sbjct: 207 RYLNEQRAFYDEV 219
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 49 PKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKK 96
PKK + Y F + R +I+ RNP K+ EV K +++ W + + +K+
Sbjct: 71 PKKSASAYIIFGKEKRAEILSRNPTAKVTEVVKEIAQSWGILSKEDKQ 118
>gi|302926833|ref|XP_003054372.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
gi|256735313|gb|EEU48659.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
Length = 101
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F + R + E NP I +V KL+ E WK + E ++ E + A +
Sbjct: 21 PNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPYEAKAAAD 80
Query: 106 KEIYAQNVKKYH 117
K+ Y + Y+
Sbjct: 81 KKRYEDEKQAYN 92
>gi|114662470|ref|XP_001165206.1| PREDICTED: TOX high mobility group box family member 3 isoform 1
[Pan troglodytes]
Length = 577
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 252 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 311
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 312 KKEYLKALAAYRASL 326
>gi|226054295|ref|NP_001073899.2| TOX high mobility group box family member 3 isoform 1 [Homo
sapiens]
gi|397498179|ref|XP_003819867.1| PREDICTED: TOX high mobility group box family member 3 [Pan
paniscus]
gi|146325793|sp|O15405.2|TOX3_HUMAN RecName: Full=TOX high mobility group box family member 3; AltName:
Full=CAG trinucleotide repeat-containing gene F9
protein; AltName: Full=Trinucleotide repeat-containing
gene 9 protein
gi|119603193|gb|EAW82787.1| hCG1639853 [Homo sapiens]
gi|208965628|dbj|BAG72828.1| TOX high mobility group box family member 3 [synthetic construct]
Length = 576
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 252 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 311
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 312 KKEYLKALAAYRASL 326
>gi|366990019|ref|XP_003674777.1| hypothetical protein NCAS_0B03190 [Naumovozyma castellii CBS 4309]
gi|342300641|emb|CCC68403.1| hypothetical protein NCAS_0B03190 [Naumovozyma castellii CBS 4309]
Length = 250
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIME---RN--PNIKIIEVTKLVSEEWKKIGEAEKKRLEN 100
P PKKPLT +F + +R ++ + RN P + E+T+ +S++WK++ + EK++ +
Sbjct: 108 PNAPKKPLTVFFAYSAYVRQELRDERQRNGLPPLSSTEITQEISKKWKELNDTEKEKWKQ 167
Query: 101 EYAKEKEIYAQNVKKY 116
Y E E Y +KY
Sbjct: 168 AYNIELEHYQVEKQKY 183
>gi|46105649|ref|XP_380561.1| hypothetical protein FG00385.1 [Gibberella zeae PH-1]
gi|110287687|sp|Q4IQX3.1|NHP6_GIBZE RecName: Full=Non-histone chromosomal protein 6
gi|408400690|gb|EKJ79767.1| hypothetical protein FPSE_00047 [Fusarium pseudograminearum CS3096]
Length = 101
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F + R + E NP I +V KL+ E WK + E ++ E + A +
Sbjct: 21 PNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPYEAKAAAD 80
Query: 106 KEIYAQNVKKYH 117
K+ Y + Y+
Sbjct: 81 KKRYEDEKQAYN 92
>gi|392337480|ref|XP_003753270.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343959|ref|XP_003748829.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 215
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 36 KQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK 95
K +T + P PK+P + +F F + R KI +P + I +V K + E W +K
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWTNTAADDK 141
Query: 96 KRLENEYAKEKEIYAQNVKKYHDELTPEAI 125
+ AK KE Y +++ Y + P+A
Sbjct: 142 QPYGKMAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 23/122 (18%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKI--IEVTKLVSEEWKKIGEAEKKRLENEYA 103
P+KP+ ++ Y F R + +++P+ + E +K SE WK + EK + E+
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKCEDMAK 65
Query: 104 KEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGKPKKPGNSFYL 163
+K Y E+E+K K E KK F++ PK+P ++F+L
Sbjct: 66 ADKARY---------------------EREMKTYIPHKGETKKKFKDPNAPKRPPSAFFL 104
Query: 164 FI 165
F
Sbjct: 105 FC 106
>gi|400599237|gb|EJP66941.1| HMG box protein [Beauveria bassiana ARSEF 2860]
Length = 96
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 24 MPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLV 83
MP + G + + + P PK+ L+ Y F + R + E NP + +V K++
Sbjct: 1 MPKAAAAPKRGARVEKKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKIL 60
Query: 84 SEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDE 119
E WK + + ++ E + A +K K+Y DE
Sbjct: 61 GERWKALSDKQRTPYEAKAAADK-------KRYEDE 89
>gi|260806967|ref|XP_002598355.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
gi|229283627|gb|EEN54367.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
Length = 223
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 41/71 (57%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ ++ +F + R K+ +P+ ++ E+ K++ +WK+I +++K + E + E
Sbjct: 96 PNAPKRAMSAFFMYCADARPKVRAAHPDFQVGEIAKILGRQWKEISDSDKAKYEKKAQTE 155
Query: 106 KEIYAQNVKKY 116
K Y + + +Y
Sbjct: 156 KARYQKELAEY 166
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPNIKII--EVTKLVSEEWKKIGEAEKKRLENEYAKE 105
KPK ++ Y F + R + ++ P+ +++ E +K +E WK + + EKKR ++ +
Sbjct: 8 KPKGKMSAYACFVQECRKEHEKKYPDKQVVFTEFSKKCAERWKTMNDGEKKRFQDLAETD 67
Query: 106 KEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLF 148
K Y + + KY + P+ E R++++ K KR M F
Sbjct: 68 KRRYEREMAKY---VPPKGAEGGRRKRKKKDPNAPKRAMSAFF 107
>gi|358391632|gb|EHK41036.1| hypothetical protein TRIATDRAFT_259074 [Trichoderma atroviride IMI
206040]
Length = 101
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 24 MPHLNSVTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLV 83
MP S G K + P PK+ L+ Y F + R + E NP I +V KL+
Sbjct: 1 MPKAASGKR-GAKDTKKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLL 59
Query: 84 SEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELTPEA 124
E WK + + ++ E + A +K+ Y + Y+ + E+
Sbjct: 60 GERWKALNDKQRAPYEAKAAADKKRYEDEKQAYNADQEDES 100
>gi|297706944|ref|XP_002830283.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pongo abelii]
Length = 125
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+PL+ +F F + KI NP I I +V K + E W + ++EK+ + AK
Sbjct: 26 PNAPKRPLSGFFLFCSEFCPKIKSTNPGISIGDVVKKLGEMWNNLNDSEKQPYVTKVAKL 85
Query: 106 KEIYAQNVKKY 116
K+ Y ++V Y
Sbjct: 86 KK-YEKDVADY 95
>gi|340520749|gb|EGR50985.1| predicted protein [Trichoderma reesei QM6a]
Length = 83
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 43 LSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEY 102
+ P PK+ L+ Y F + R + E NP I +V KL+ E WK + + ++ E +
Sbjct: 1 MQDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNDKQRAPYEAKA 60
Query: 103 AKEKEIYAQNVKKYH 117
A +K+ Y + Y+
Sbjct: 61 AADKKRYEDEKQAYN 75
>gi|328861507|gb|EGG10610.1| hypothetical protein MELLADRAFT_93640 [Melampsora larici-populina
98AG31]
Length = 360
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 48 KPKK---PLTPYFKFQGQIRNKIMERNP------NIKIIEVTKLVSEEWKKIGEAEKKRL 98
KPK+ P P+ Q I + + E+ ++ + + +L E+++ + E E+K
Sbjct: 123 KPKRLIPPKRPWSIMQLVIESVVAEQKSATGSITSMAMRDCFRLAGEKYRSLSEEERKSY 182
Query: 99 ENEYAKEKEIYAQNVKKYHDELTPEAI----EFLRKEKEVKKQKKEKREMKKLFRETGKP 154
+ + K ++ Y ++++ D LTP+ E++R+ + + + +R + KL + P
Sbjct: 183 QEDLDKRRQAYEAEMRQFLDSLTPQDYVNQNEYIRRRRALGRSTA-RRGIPKL--DPNAP 239
Query: 155 KKPGNSFYLFIKD 167
K+P N F LF D
Sbjct: 240 KRPLNGFMLFCAD 252
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKI--------MERNPNIKIIEVTKLVSEEWKKIGEAEKKR 97
P PK+PL + F IR + P I E +K+ + W+++ + K+
Sbjct: 236 PNAPKRPLNGFMLFCADIRANPTKFGEFLGLSNTPTTSITEESKVYAAYWREMKDEVKQT 295
Query: 98 LENEYAKEKEIYAQNVKKYHDELTPEAIEFL 128
+E + +E+Y Q ++Y D++ ++ +FL
Sbjct: 296 YLDEATRLRELYKQEKEQYDDQIKAKSAQFL 326
>gi|346468357|gb|AEO34023.1| hypothetical protein [Amblyomma maculatum]
Length = 734
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 48 KPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKE 107
KPK+P + YF + + R+KI + NP+ I +VTK E WK++ +K + E + +
Sbjct: 560 KPKRPPSAYFLWLAENRDKIKKDNPSFSITDVTKRAGELWKEV--TDKSKWEQQAVEAAA 617
Query: 108 IYAQNVKKYHDELT 121
Y + + Y L+
Sbjct: 618 KYKEAMAAYQASLS 631
>gi|325186333|emb|CCA20838.1| SWI/SNFrelated matrixassociated actindependent regulator of
chromatin putative [Albugo laibachii Nc14]
Length = 463
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKR------LE 99
P +P KP+ + F + R KIME NP+I + +K++ E W+K+ E ++ + LE
Sbjct: 314 PNRPPKPVNTFLMFCRERRKKIMEANPSISAKDASKILGEIWQKLSEHDRAKYQPMTDLE 373
Query: 100 NE 101
NE
Sbjct: 374 NE 375
>gi|307568341|pdb|3NM9|A Chain A, Hmgd(M13a)-Dna Complex
gi|307568342|pdb|3NM9|D Chain D, Hmgd(M13a)-Dna Complex
gi|307568343|pdb|3NM9|G Chain G, Hmgd(M13a)-Dna Complex
gi|307568344|pdb|3NM9|J Chain J, Hmgd(M13a)-Dna Complex
gi|307568345|pdb|3NM9|M Chain M, Hmgd(M13a)-Dna Complex
gi|307568346|pdb|3NM9|P Chain P, Hmgd(M13a)-Dna Complex
Length = 73
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 47 EKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEK 106
+KPK+PL+ Y + R I NP IK+ EV K E W+ + +K E + AK K
Sbjct: 2 DKPKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAK 59
Query: 107 EIYAQNVKKYH 117
+ Y + VK++
Sbjct: 60 DDYDRAVKEFE 70
>gi|297461758|ref|XP_885168.3| PREDICTED: TOX high mobility group box family member 3 isoform 2
[Bos taurus]
gi|297485262|ref|XP_002694823.1| PREDICTED: TOX high mobility group box family member 3 [Bos taurus]
gi|296478066|tpg|DAA20181.1| TPA: TOX high mobility group box family member 3-like [Bos taurus]
Length = 556
Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 252 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 311
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 312 KKEYLKALAAYRASL 326
>gi|410983521|ref|XP_003998087.1| PREDICTED: TOX high mobility group box family member 3 [Felis
catus]
Length = 561
Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 250 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 309
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 310 KKEYLKALAAYRASL 324
>gi|340992807|gb|EGS23362.1| hypothetical protein CTHT_0010300 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 104
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+ L+ Y F + R+ + E NP I +V K++ E WK + + ++ E + A +
Sbjct: 22 PNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKILGERWKALTDKQRAPYEAKAAAD 81
Query: 106 KEIYAQNVKKYH 117
K+ Y + Y+
Sbjct: 82 KKRYEDEKQAYN 93
>gi|402908366|ref|XP_003916917.1| PREDICTED: TOX high mobility group box family member 3 [Papio
anubis]
Length = 556
Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 216 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 275
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 276 KKEYLKALAAYRASL 290
>gi|357620405|gb|EHJ72609.1| hypothetical protein KGM_12870 [Danaus plexippus]
Length = 619
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ + + NP++K+ E+ +++ W+ + ++EK +EY EK Y +
Sbjct: 112 PLMPYMRYSRRVWDSVKAANPDLKLWEIGRIIGGMWRDLPQSEKYAFVDEYEAEKAQYTE 171
Query: 112 NVKKYHDELTPEAIEFL 128
+K Y + +P +++L
Sbjct: 172 MLKAY--QSSPAYLQWL 186
>gi|296425555|ref|XP_002842306.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638569|emb|CAZ86497.1| unnamed protein product [Tuber melanosporum]
Length = 545
Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 30 VTTAGLKQQTSQPLSIPEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKK 89
+ G ++ P P+KP + Y F ++R+++ + N+ ++ KLV E+WK
Sbjct: 98 IAPTGKRKYRRHPKPDEHAPEKPPSAYVMFANRVRDEL--KGQNLSFTDIAKLVGEKWKV 155
Query: 90 IGEAEKKRLENEYAKEKEIYAQNVKKYHD-ELTPEAIEFLRKEKEVKKQKKEKREMKKLF 148
+ K+ E+E + KE Y + +Y + E I++L K K KE RE
Sbjct: 156 LDPENKESYEHEASIAKEKYNSELLEYKKTDSYKEYIQYLSDFKS--KASKEGREGSGKI 213
Query: 149 RET 151
ET
Sbjct: 214 HET 216
>gi|119572005|gb|EAW51620.1| upstream binding transcription factor, RNA polymerase I, isoform
CRA_d [Homo sapiens]
Length = 164
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 39/53 (73%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRL 98
P+ PKKPLTPYF+F + R K + +P + +++TK++S+++K++ E +K R+
Sbjct: 109 PDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKGRI 161
>gi|56753852|gb|AAW25123.1| SJCHGC08108 protein [Schistosoma japonicum]
Length = 135
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 40/66 (60%)
Query: 52 PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQ 111
PL PY ++ ++ ++ NP++K+ EV K++ + W+++ + EK EY EK Y +
Sbjct: 40 PLMPYMRYSRKVWEQVKNSNPHLKLWEVGKIIGQMWRELPDDEKILYVEEYDAEKTQYTE 99
Query: 112 NVKKYH 117
+++YH
Sbjct: 100 LLRQYH 105
>gi|170932534|ref|NP_766501.2| TOX high mobility group box family member 3 [Mus musculus]
gi|81873298|sp|Q80W03.1|TOX3_MOUSE RecName: Full=TOX high mobility group box family member 3; AltName:
Full=Trinucleotide repeat-containing gene 9 protein
gi|30705097|gb|AAH52044.1| TOX high mobility group box family member 3 [Mus musculus]
Length = 575
Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 251 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 310
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 311 KKEYLKALAAYRASL 325
>gi|325186334|emb|CCA20839.1| SWI/SNFrelated matrixassociated actindependent regulator of
chromatin putative [Albugo laibachii Nc14]
Length = 454
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKR------LE 99
P +P KP+ + F + R KIME NP+I + +K++ E W+K+ E ++ + LE
Sbjct: 305 PNRPPKPVNTFLMFCRERRKKIMEANPSISAKDASKILGEIWQKLSEHDRAKYQPMTDLE 364
Query: 100 NE 101
NE
Sbjct: 365 NE 366
>gi|412992276|emb|CCO19989.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 94
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEK 95
P PK+ L+ YF F R K+++ NP++K+ EV K + E W+ + ++EK
Sbjct: 21 PNAPKRNLSAYFFFMNDQRAKVVKANPDMKVTEVGKKLGELWRAMSDSEK 70
>gi|348689660|gb|EGZ29474.1| hypothetical protein PHYSODRAFT_309820 [Phytophthora sojae]
Length = 215
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIY 109
KKP + Y F + R ++M+ NP +I ++ K++S +WK++ EK+ AK+KE Y
Sbjct: 5 KKPQSSYLLFCNERRKQVMDENPGARIGDIQKIISAQWKELKPEEKEVYVQLAAKDKERY 64
Query: 110 AQNV 113
Q +
Sbjct: 65 QQEL 68
>gi|148679118|gb|EDL11065.1| trinucleotide repeat containing 9 [Mus musculus]
Length = 574
Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 250 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 309
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 310 KKEYLKALAAYRASL 324
>gi|344241535|gb|EGV97638.1| High mobility group protein B1 [Cricetulus griseus]
gi|344241536|gb|EGV97639.1| High mobility group protein B1 [Cricetulus griseus]
Length = 154
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P PK+P +F F + K RNP + I +V K + E W +K+ E + A+
Sbjct: 40 PNAPKRPPLAFFLFCCEYHPKNQRRNPGLSIGDVAKKLGEMWNNTAADDKQTYEKKAAEL 99
Query: 106 KEIYAQNVKKYHDELTPEAI 125
KE Y ++ Y + P+A+
Sbjct: 100 KEKYKKDTAAYRTKGKPDAV 119
>gi|325186332|emb|CCA20837.1| SWI/SNFrelated matrixassociated actindependent regulator of
chromatin putative [Albugo laibachii Nc14]
Length = 472
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKR------LE 99
P +P KP+ + F + R KIME NP+I + +K++ E W+K+ E ++ + LE
Sbjct: 323 PNRPPKPVNTFLMFCRERRKKIMEANPSISAKDASKILGEIWQKLSEHDRAKYQPMTDLE 382
Query: 100 NE 101
NE
Sbjct: 383 NE 384
>gi|196005089|ref|XP_002112411.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
gi|190584452|gb|EDV24521.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
Length = 253
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P+KPK+P T YF F + R K M+ I+ ++T L E+W+ + AEK + E K+
Sbjct: 136 PDKPKRPQTAYFYFLAEFR-KAMKAKGVIEGKKLTSLSGEKWRAMTPAEKAKYEAMVTKD 194
Query: 106 KEIYAQNVKKYH 117
KE Y + + Y
Sbjct: 195 KERYQREMDAYR 206
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 50 KKPLTPYFKFQGQIRNKIMERNPNI-KIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEI 108
KKP + Y F +R ++ + + K E+ K+ EW+ + ++KK + A++K+
Sbjct: 63 KKPKSAYIFFTTSLRQRLKKSGREMPKAHEIAKMCGSEWRAMTASQKKPYDELAARDKQR 122
Query: 109 YAQNVKKYHDELTPE 123
Y + + K+ + P+
Sbjct: 123 YMEEISKFRKKADPD 137
>gi|26349811|dbj|BAC38545.1| unnamed protein product [Mus musculus]
Length = 575
Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 251 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 310
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 311 KKEYLKALAAYRASL 325
>gi|405960935|gb|EKC26804.1| High mobility group protein 20A [Crassostrea gigas]
Length = 341
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 23/141 (16%)
Query: 22 CLMPHLNSVTTAGLKQQTSQPLSIPEK--------------------PKKPLTPYFKFQG 61
+ P ++ + T GL+Q T P + PK L Y F
Sbjct: 53 VMTPTMSDLPTVGLQQTTEVEGVAPTEKKKGGWPKGKKRKKMRDSNAPKPALNGYLHFLN 112
Query: 62 QIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKEKEIYAQNVKKYHDELT 121
+ R + NP + E+ +++ EW K+ + EK+R +E K+KE Y + ++ Y
Sbjct: 113 ERREILRRENPTMAFAEMIRVLGAEWTKLPQHEKQRFLDEAEKDKERYNREMEAYQ---K 169
Query: 122 PEAIEFLRKEKEVKKQKKEKR 142
EA + + +KE K ++ E +
Sbjct: 170 TEAFKLFKAQKEKKMKEMEAQ 190
>gi|403292578|ref|XP_003937316.1| PREDICTED: TOX high mobility group box family member 3 [Saimiri
boliviensis boliviensis]
Length = 551
Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 216 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 275
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 276 KKEYLKALAAYRASL 290
>gi|221485710|gb|EEE23991.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221502922|gb|EEE28632.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 651
Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIK--IIEVTKLVSEEWKKIGEAEKKRLENEYA 103
P PKKPL+ Y F R +I+++ P++K I +V K++ EEW K+ ++K + +
Sbjct: 575 PNAPKKPLSSYMFFAKDKRAEILKKQPSLKSDIGKVGKMIGEEWAKLSSSQKMTYQKKAE 634
Query: 104 KEKEIYAQNVKKYHDE 119
+EK Y + + Y+ +
Sbjct: 635 QEKIRYQREMSLYNKK 650
>gi|392568491|gb|EIW61665.1| hypothetical protein TRAVEDRAFT_115835 [Trametes versicolor
FP-101664 SS1]
Length = 585
Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 36 KQQTSQPLSIPEKPKK--PLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEA 93
K+ S PL +P K P F I+ + + + + K +E+ K+ +
Sbjct: 332 KRSESPPLKSTLRPPKLAPSAWQLYFTDWIQRHQASSSKKLNVAQAAKEAGQEYAKLSDE 391
Query: 94 EKKRLENEYAKEKEIYAQNVKKYHDELTPEAIEFLRKEKEVKKQKKEKREMKKLFRETGK 153
EK+ + KE + + Y LTPE I+ R+ + Q+K + K ++
Sbjct: 392 EKEPYRRRSLEAKEARERELNAYMRTLTPEDIK--RENQYRTAQRKAGKSRKGNLKDPNA 449
Query: 154 PKKPGNSFYLFIK 166
PKKP +++++F++
Sbjct: 450 PKKPLSAYFMFLQ 462
>gi|170097113|ref|XP_001879776.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645179|gb|EDR09427.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 114
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P KPK+ L+ Y F R++I NP+ EV KL+ +WK++ E EKK + +K+
Sbjct: 28 PNKPKRALSAYMFFSQDWRDRIKAENPDAGFGEVGKLLGAKWKELDEEEKKPYVEQASKD 87
Query: 106 KEIYAQNVKKYHD 118
K A+ K +D
Sbjct: 88 K-TRAEEAKAAYD 99
>gi|355756773|gb|EHH60381.1| hypothetical protein EGM_11729 [Macaca fascicularis]
Length = 543
Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 216 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 275
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 276 KKEYLKALAAYRASL 290
>gi|355710193|gb|EHH31657.1| hypothetical protein EGK_12773 [Macaca mulatta]
Length = 541
Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 PEKPKKPLTPYFKFQGQIRNKIMERNPNIKIIEVTKLVSEEWKKIGEAEKKRLENEYAKE 105
P +P+KP++ Y F + I +NPN EV+K+V+ W +GE +K+ + +
Sbjct: 216 PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAA 275
Query: 106 KEIYAQNVKKYHDEL 120
K+ Y + + Y L
Sbjct: 276 KKEYLKALAAYRASL 290
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.132 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,881,645,022
Number of Sequences: 23463169
Number of extensions: 122010516
Number of successful extensions: 844812
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4442
Number of HSP's successfully gapped in prelim test: 5437
Number of HSP's that attempted gapping in prelim test: 778171
Number of HSP's gapped (non-prelim): 46209
length of query: 180
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 47
effective length of database: 9,238,593,890
effective search space: 434213912830
effective search space used: 434213912830
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 72 (32.3 bits)