RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy14924
(209 letters)
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod
glycosylated protein, hydrolase; HET: NAG FUC SCK SCU
P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A*
1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A*
2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A*
2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Length = 543
Score = 171 bits (436), Expect = 5e-51
Identities = 51/126 (40%), Positives = 69/126 (54%), Gaps = 10/126 (7%)
Query: 55 ESKTSDKTPVLVYIHGESFSWNSGS--VYDGTVLSSFASMVVVTVNYRLGILGFLNPSKD 112
+ + TPVL++I+G F + S VYDG L+ V+V++NYR+G GFL
Sbjct: 105 YPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGS 164
Query: 113 YRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVPDGE 172
A P N GLLDQ AL W++ENI FGGDP +++L G GAA + + S
Sbjct: 165 REA--PGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLP----- 217
Query: 173 WSRFLF 178
SR LF
Sbjct: 218 -SRSLF 222
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse,
membrane, nerve, muscle neurotransmitter degradation,
glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila
melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Length = 585
Score = 171 bits (435), Expect = 1e-50
Identities = 37/131 (28%), Positives = 71/131 (54%), Gaps = 12/131 (9%)
Query: 54 DESKTSDKTPVLVYIHGESFSWNSGS--VYDGTVLSSFASMVVVTVNYRLGILGFLNPSK 111
+ T++ P+L++I+G F S + +Y+ ++++ +++V + YR+G GFL+ +
Sbjct: 133 NPQNTTNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAP 192
Query: 112 DYRAR----IPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPA 167
+ + P N GL DQ A+ W+K+N FGG+P ++L G G++ +N + SP
Sbjct: 193 EMPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPV 252
Query: 168 VPDGEWSRFLF 178
+R L
Sbjct: 253 ------TRGLV 257
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase,
neurotransmitter cleavage, catalytic triad, alpha/beta
hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP:
c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A*
1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A
1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A*
1vxr_A* ...
Length = 537
Score = 169 bits (429), Expect = 4e-50
Identities = 47/125 (37%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 56 SKTSDKTPVLVYIHGESFSWNSGS--VYDGTVLSSFASMVVVTVNYRLGILGFLNPSKDY 113
S T V+V+I+G F S + VY+G L+ +V+V+++YR+G GFL
Sbjct: 103 SPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQ 162
Query: 114 RARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVPDGEW 173
A P N GLLDQ AL W+ +NI FGGDP +++ G G A + + SP
Sbjct: 163 EA--PGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPG------ 214
Query: 174 SRFLF 178
SR LF
Sbjct: 215 SRDLF 219
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC
MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A*
1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A*
3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A*
2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Length = 529
Score = 169 bits (429), Expect = 5e-50
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 56 SKTSDKTPVLVYIHGESFSWNSGS--VYDGTVLSSFASMVVVTVNYRLGILGFLNPSKDY 113
+ VL++I+G F + S VYDG L+ ++VV++NYR+G LGFL +
Sbjct: 101 APKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNP 160
Query: 114 RARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVPDGEW 173
A P N GL DQ AL W+++NI FGG+P +++L G GAA ++ + SP
Sbjct: 161 EA--PGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPG------ 212
Query: 174 SRFLF 178
S LF
Sbjct: 213 SHSLF 217
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase;
HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP:
c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A*
1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A*
2hrq_A* 3k9b_A* 1k4y_A*
Length = 542
Score = 167 bits (426), Expect = 1e-49
Identities = 44/125 (35%), Positives = 72/125 (57%), Gaps = 11/125 (8%)
Query: 55 ESKTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASMVVVTVNYRLGILGFLN-PSKDY 113
+ ++ PV+V+IHG + S YDG L++ ++VVVT+ YRLGI GF + +
Sbjct: 108 DLTKKNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEH- 166
Query: 114 RARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVPDGEW 173
N+G LDQ+AAL W+++NI FGG+P ++++ G G ++ L+ SP
Sbjct: 167 ---SRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPL------ 217
Query: 174 SRFLF 178
++ LF
Sbjct: 218 AKNLF 222
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase,
cell adhesion, cell J glycoprotein, membrane,
postsynaptic cell membrane; HET: NAG; 1.80A {Rattus
norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A*
2vh8_A 3bl8_A*
Length = 574
Score = 165 bits (419), Expect = 2e-48
Identities = 54/113 (47%), Positives = 74/113 (65%), Gaps = 3/113 (2%)
Query: 54 DESKTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASMVVVTVNYRLGILGFLNPSKDY 113
D + PV+VYIHG S+ +G++YDG+VL+S+ +++V+TVNYRLG+LGFL+
Sbjct: 123 DIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVITVNYRLGVLGFLSTGDQA 182
Query: 114 RARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSP 166
N+GLLD I AL W ENIG FGGDP I++ G G G +C+N L S
Sbjct: 183 ---AKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSH 232
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A
{Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A
1jmy_A
Length = 579
Score = 162 bits (413), Expect = 2e-47
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 19/134 (14%)
Query: 54 DESKTSDKTPVLVYIHGESFSWNSGS--------VYDGTVLSSFASMVVVTVNYRLGILG 105
+ S PV+++I+G +F + +YDG +++ +++VVT NYR+G LG
Sbjct: 90 GRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLG 149
Query: 106 FLN-PSKDYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMT 164
FL+ + +P N+GL DQ A+ W+K NI FGGDP I+L G G A ++
Sbjct: 150 FLSTGDSN----LPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTL 205
Query: 165 SPAVPDGEWSRFLF 178
SP ++ L
Sbjct: 206 SPY------NKGLI 213
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase
directed evolution; 1.50A {Bacillus subtilis} SCOP:
c.69.1.1 PDB: 1c7j_A 1c7i_A
Length = 489
Score = 155 bits (394), Expect = 2e-45
Identities = 51/111 (45%), Positives = 70/111 (63%), Gaps = 3/111 (2%)
Query: 59 SDKTPVLVYIHGESFSWNSGS--VYDGTVLSSFASMVVVTVNYRLGILGFLNPSKDYRAR 116
S PV+V+IHG +F +GS +YDG+ L++ ++VVT+NYRLG GFL+ S +
Sbjct: 94 SQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLS-SFDEA 152
Query: 117 IPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPA 167
N GLLDQ AAL W++ENI FGGDP N+++ G G I L+ PA
Sbjct: 153 YSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPA 203
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase,
hydrolase; 1.58A {Geobacillus stearothermophilus} PDB:
2ogs_A
Length = 498
Score = 154 bits (392), Expect = 7e-45
Identities = 52/116 (44%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 56 SKTSDKTPVLVYIHGESFSWNSGS--VYDGTVLSSFASMVVVTVNYRLGILGFLN-PSKD 112
+ K PVL +IHG +F + SGS YDGT + +VVVT+NYR+ + GFL+
Sbjct: 93 AADGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSF 152
Query: 113 YRAR-IPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPA 167
A N G+LDQ+AAL W+KENI FGGDP NI++ G GAA + L++ P
Sbjct: 153 GEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPE 208
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H;
HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Length = 522
Score = 153 bits (388), Expect = 3e-44
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 57 KTSDKTPVLVYIHGESFSWNSGSVYDGT--VLSSFASMVVVTVNYRLGILGFLNPSKDYR 114
+ K PV ++I G ++ NS + Y+GT + +S +V VT NYR+G LGFL S+ R
Sbjct: 97 TSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFL-ASEKVR 155
Query: 115 ARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPA 167
N GLLDQ AL W+K+ I +FGGDP +I + G GA + + +++
Sbjct: 156 QNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYG 208
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A
{Galactomyces geotrichum} SCOP: c.69.1.17
Length = 544
Score = 151 bits (383), Expect = 2e-43
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 57 KTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFAS-----MVVVTVNYRLGILGFLNPSK 111
K K PV+V+I+G +F + S + Y G + +V V++NYR G GFL
Sbjct: 117 KPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFL-GGD 175
Query: 112 DYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVPDG 171
A N GL DQ L W+ +NI FGGDP + + G GA + + + +
Sbjct: 176 AITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNT 235
Query: 172 EWSRFLF 178
+ LF
Sbjct: 236 YNGKKLF 242
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester
acylh hydrolase; HET: NAG F23; 1.40A {Candida
cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A*
1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A*
1gz7_A*
Length = 534
Score = 147 bits (373), Expect = 4e-42
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 57 KTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFAS-----MVVVTVNYRLGILGFLNPSK 111
K PV+++I G F S +++ + + + ++ V VNYR+ GFL
Sbjct: 109 KAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFL-AGD 167
Query: 112 DYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVPDG 171
D +A N GL DQ + W+ +NI FGGDPS +++ G G+ + + +
Sbjct: 168 DIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNT 227
Query: 172 EWSRFLF 178
+ LF
Sbjct: 228 YKGKPLF 234
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase;
HET: TFC; 2.70A {Trichoplusia NI}
Length = 551
Score = 140 bits (355), Expect = 3e-39
Identities = 46/139 (33%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 42 VVVTVNYRLGILDESKTSDKTPVLVYIHGESFSWNSG-SVYDGTVLSSFASMVVVTVNYR 100
+ V + PVLV+IHG F++ SG S G ++V+T NYR
Sbjct: 95 IHVPYYALPRDAADKNRFAGLPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYR 154
Query: 101 LGILGFLN-PSKDYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACI 159
L + GFL+ S +P N GL D + L W++ N FGG P +++LMG GAA
Sbjct: 155 LNVYGFLSLNSTS----VPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAAT 210
Query: 160 NFLMTSPAVPDGEWSRFLF 178
+ L S A + LF
Sbjct: 211 HILSLSKA------ADGLF 223
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary
alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A
3zwq_A
Length = 313
Score = 64.2 bits (157), Expect = 1e-12
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 57 KTSDKTPVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRLGILGFLNPSKDYR 114
+ ++ P +VY HG F S +D L++ + VVV+V+YRL P
Sbjct: 71 RDGERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLA------PE---- 120
Query: 115 ARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGH---GTGAA 157
+ PA + D A W+ +N + G D I++ G G AA
Sbjct: 121 HKFPA--AVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAA 164
Score = 40.4 bits (95), Expect = 2e-04
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 6 KTSDKTPVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRL 50
+ ++ P +VY HG F S +D L++ + VVV+V+YRL
Sbjct: 71 RDGERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRL 117
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold,
hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A
{Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Length = 303
Score = 64.2 bits (156), Expect = 1e-12
Identities = 24/121 (19%), Positives = 48/121 (39%), Gaps = 19/121 (15%)
Query: 57 KTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFAS--MVVVTVNYRLGILGFLNPSKDYR 114
KT+++ P+ V++HG + S+ ++ V ++Y L P +
Sbjct: 77 KTTNQAPLFVFVHGGYWQEMDMSMSCS-IVGPLVRRGYRVAVMDYNLC------P----Q 125
Query: 115 ARIPANFGLLDQIA-ALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVPDGEW 173
+ L+ Q L+WI + S+++ GH GA + ++ P V +
Sbjct: 126 VTLEQ---LMTQFTHFLNWIFDYTEM--TKVSSLTFAGHXAGAHLLAQILMRPNVITAQR 180
Query: 174 S 174
S
Sbjct: 181 S 181
Score = 36.4 bits (84), Expect = 0.004
Identities = 10/47 (21%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 6 KTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFAS--MVVVTVNYRL 50
KT+++ P+ V++HG + S+ +++ V ++Y L
Sbjct: 77 KTTNQAPLFVFVHGGYWQEMDMSMS-CSIVGPLVRRGYRVAVMDYNL 122
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE;
2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Length = 311
Score = 62.7 bits (153), Expect = 5e-12
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 21/106 (19%)
Query: 59 SDKTPVLVYIHGESFSWNSGSV--YDGTV--LSSFASMVVVTVNYRLGILGFLNPSKDYR 114
+PVLVY HG + S+ +D ++ ++ VV+V+YRL P
Sbjct: 76 KPDSPVLVYYHGGG--FVICSIESHDALCRRIARLSNSTVVSVDYRLA------PE---- 123
Query: 115 ARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGH---GTGAA 157
+ PA + D A W+ EN E DPS I + G G AA
Sbjct: 124 HKFPA--AVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAA 167
Score = 38.8 bits (91), Expect = 6e-04
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Query: 8 SDKTPVLVYIHGESFSWNSGSV--YDGTV--LSSFASMVVVTVNYRL 50
+PVLVY HG + S+ +D ++ ++ VV+V+YRL
Sbjct: 76 KPDSPVLVYYHGG--GFVICSIESHDALCRRIARLSNSTVVSVDYRL 120
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A
{Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A
1qz3_A
Length = 310
Score = 62.2 bits (152), Expect = 6e-12
Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 17/105 (16%)
Query: 58 TSDKTPVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRLGILGFLNPSKDYRA 115
P LVY HG S+ +D L+ VV +V+YRL P
Sbjct: 70 VEPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLA------P----EH 119
Query: 116 RIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGH---GTGAA 157
+ PA + D AL WI E +F DP+ I++ G G AA
Sbjct: 120 KFPA--AVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAA 162
Score = 38.4 bits (90), Expect = 8e-04
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 7 TSDKTPVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRL 50
P LVY HG S+ +D L+ VV +V+YRL
Sbjct: 70 VEPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRL 115
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme,
hydrolase, HSL, alpha/beta hydrolase fold; 2.3A
{Uncultured archaeon}
Length = 311
Score = 61.9 bits (151), Expect = 8e-12
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 21/108 (19%)
Query: 57 KTSDKTPVLVYIHGESFSWNSGSV--YDGTV--LSSFASMVVVTVNYRLGILGFLNPSKD 112
K + P ++Y HG + GS+ +D LS + VVV+V+YRL P
Sbjct: 68 KKAAGLPAVLYYHGGG--FVFGSIETHDHICRRLSRLSDSVVVSVDYRLA------PE-- 117
Query: 113 YRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGH---GTGAA 157
+ P + D AAL W+ + E G DP I++ G G AA
Sbjct: 118 --YKFPT--AVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAA 161
Score = 38.4 bits (90), Expect = 8e-04
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Query: 6 KTSDKTPVLVYIHGESFSWNSGSV--YDGTV--LSSFASMVVVTVNYRL 50
K + P ++Y HG + GS+ +D LS + VVV+V+YRL
Sbjct: 68 KKAAGLPAVLYYHGG--GFVFGSIETHDHICRRLSRLSDSVVVSVDYRL 114
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP:
c.69.1.2 PDB: 1lzk_A
Length = 323
Score = 61.5 bits (150), Expect = 1e-11
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 17/105 (16%)
Query: 58 TSDKTPVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRLGILGFLNPSKDYRA 115
T+ PVL++IHG F+ + D ++ V V YRL P
Sbjct: 75 TAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLA------P----ET 124
Query: 116 RIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGH---GTGAA 157
P + D AAL +I + E G DPS I++ G G AA
Sbjct: 125 TFPG--PVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAA 167
Score = 38.0 bits (89), Expect = 0.001
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 7 TSDKTPVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRL 50
T+ PVL++IHG F+ + D ++ V V YRL
Sbjct: 75 TAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRL 120
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO
PSI-2, protein structure initiative, midwest center for
STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Length = 274
Score = 60.6 bits (147), Expect = 2e-11
Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 18/102 (17%)
Query: 57 KTSDKTPVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRLGILGFLNPSKDYR 114
T++ T +VY+HG + + S + L + V+ ++Y L P
Sbjct: 22 TTTEPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLA------P----N 71
Query: 115 ARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGA 156
+I L + E + L G G
Sbjct: 72 TKIDH--ILRTLTETFQLLNEE----IIQNQSFGLCGRSAGG 107
Score = 41.0 bits (96), Expect = 1e-04
Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 6 KTSDKTPVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRL 50
T++ T +VY+HG + + S + L + V+ ++Y L
Sbjct: 22 TTTEPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLL 68
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural
genomics, joint center structural genomics, JCSG; HET:
EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Length = 277
Score = 60.6 bits (147), Expect = 2e-11
Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 13/125 (10%)
Query: 48 YRLGILDESKTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASM--VVVTVNYRLGILG 105
Y L + + +T+ P+++ G F+++SG + + + V +NY+L
Sbjct: 21 YWLDQISDFETAVDYPIMIICPGGGFTYHSGREEAP-IATRMMAAGMHTVVLNYQL---- 75
Query: 106 FLNPSKDYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTS 165
++ P L A + WI D I L G G +
Sbjct: 76 ----IVGDQSVYPWA--LQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGV 129
Query: 166 PAVPD 170
P+
Sbjct: 130 ATQPE 134
Score = 30.6 bits (69), Expect = 0.26
Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 3 NESKTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASM--VVVTVNYRLGILDESK 57
++ +T+ P+++ G F+++SG + + + V +NY+L + D+S
Sbjct: 27 SDFETAVDYPIMIICPGGGFTYHSGREEAP-IATRMMAAGMHTVVLNYQLIVGDQSV 82
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural
genomics CEN infectious disease, tuberculosis, O LIPW,
heroin esterase; 1.75A {Mycobacterium marinum}
Length = 317
Score = 60.7 bits (148), Expect = 3e-11
Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 17/100 (17%)
Query: 63 PVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRLGILGFLNPSKDYRARIPAN 120
PV+VY H F+ + L+ A VV+V+YRL P PA
Sbjct: 86 PVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLA------P----EHPYPA- 134
Query: 121 FGLLDQIAALHWIKENIGEFGGDPSNISLMGH---GTGAA 157
L D I L W+ N G D +++ G T AA
Sbjct: 135 -ALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAA 173
Score = 36.9 bits (86), Expect = 0.003
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 12 PVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRL 50
PV+VY H F+ + L+ A VV+V+YRL
Sbjct: 86 PVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRL 126
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine
structural genomics, center for structural genomics of
INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella
typhimurium}
Length = 326
Score = 60.4 bits (147), Expect = 3e-11
Identities = 19/105 (18%), Positives = 39/105 (37%), Gaps = 21/105 (20%)
Query: 60 DKTPVLVYIHGESFSWNSGSV--YDGTV--LSSFASMVVVTVNYRLGILGFLNPSKDYRA 115
L Y+HG + G++ +D + L+ + V+ ++Y L P +A
Sbjct: 85 TSQATLYYLHGGG--FILGNLDTHDRIMRLLARYTGCTVIGIDYSLS------P----QA 132
Query: 116 RIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGH---GTGAA 157
R P + + +A + ++ E+ + I G A
Sbjct: 133 RYPQ--AIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLAL 175
Score = 36.5 bits (85), Expect = 0.003
Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Query: 9 DKTPVLVYIHGESFSWNSGSV--YDGTV--LSSFASMVVVTVNYRL 50
L Y+HG + G++ +D + L+ + V+ ++Y L
Sbjct: 85 TSQATLYYLHGG--GFILGNLDTHDRIMRLLARYTGCTVIGIDYSL 128
>1vkh_A Putative serine hydrolase; structural genomics, joint center
structural genomics, JCSG, protein structure initiative,
PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae}
SCOP: c.69.1.32
Length = 273
Score = 59.3 bits (143), Expect = 6e-11
Identities = 22/125 (17%), Positives = 50/125 (40%), Gaps = 24/125 (19%)
Query: 57 KTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSF-------ASMVVVTVNYRLGILGFLNP 109
+ + ++YIHG +++ + D L++ +++ ++ YRL P
Sbjct: 36 ISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLS------P 89
Query: 110 SKDYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVP 169
P L D ++ + + + +NI+++GH GA I ++ + P
Sbjct: 90 ----EITNPR--NLYDAVSNITRLVKE-----KGLTNINMVGHSVGATFIWQILAALKDP 138
Query: 170 DGEWS 174
+ S
Sbjct: 139 QEKMS 143
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase,
gibberellin signaling pathway, hydrolase, nucleus,
hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp}
PDB: 3ed1_A*
Length = 365
Score = 58.9 bits (143), Expect = 1e-10
Identities = 28/135 (20%), Positives = 44/135 (32%), Gaps = 30/135 (22%)
Query: 29 VYDGTVLSSFASMVVVTVNYRLGILDESKTSDKTPVLVYIHG-----ESFSWNSGSVYDG 83
+Y L L ++ ++ PV+++ HG S S ++YD
Sbjct: 79 IYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASS---TIYDS 135
Query: 84 TV--LSSFASMVVVTVNYRLGILGFLNPSKDYRA---RIPANFGLLDQIAALHWIKEN-- 136
+ VVV+VNYR A R P D AL W+
Sbjct: 136 LCRRFVKLSKGVVVSVNYRR-------------APEHRYPC--AYDDGWTALKWVMSQPF 180
Query: 137 IGEFGGDPSNISLMG 151
+ G + + L G
Sbjct: 181 MRSGGDAQARVFLSG 195
Score = 42.0 bits (99), Expect = 6e-05
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 10/54 (18%)
Query: 4 ESKTSDKTPVLVYIHG-----ESFSWNSGSVYDGTV--LSSFASMVVVTVNYRL 50
++ ++ PV+++ HG S S ++YD + VVV+VNYR
Sbjct: 105 DAPAAEPFPVIIFFHGGSFVHSSASS---TIYDSLCRRFVKLSKGVVVSVNYRR 155
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia
eriantha} PDB: 2o7v_A
Length = 338
Score = 55.8 bits (135), Expect = 1e-09
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 25/104 (24%)
Query: 58 TSDKTPVLVYIHG-----ESFSWNSGSVYDGTV--LSSFASMVVVTVNYRLGILGFLNPS 110
S K P++VY HG S + +++ ++ A +V+ +V+YRL P
Sbjct: 79 NSAKLPLVVYFHGGGFILFSAAS---TIFHDFCCEMAVHAGVVIASVDYRLA------P- 128
Query: 111 KDYRARIPANFGLLDQIAALHWIKENIGEF---GGDPSNISLMG 151
R+PA D + AL WIK++ E+ D SN +MG
Sbjct: 129 ---EHRLPA--AYDDAMEALQWIKDSRDEWLTNFADFSNCFIMG 167
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic,
dimer, archaea, R267G, hydro; 1.65A {Sulfolobus
tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Length = 323
Score = 55.7 bits (135), Expect = 1e-09
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 15/97 (15%)
Query: 57 KTSDKTPVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRLGILGFLNPSKDYR 114
KT VLVY HG F YD +++ V ++V+YRL P
Sbjct: 85 KTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLA------PE---- 134
Query: 115 ARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMG 151
+ PA ++D AL W+ N +F I++ G
Sbjct: 135 NKFPA--AVVDSFDALKWVYNNSEKF-NGKYGIAVGG 168
Score = 39.2 bits (92), Expect = 5e-04
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 6 KTSDKTPVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRL 50
KT VLVY HG F YD +++ V ++V+YRL
Sbjct: 85 KTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRL 131
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A,
alpha/beta hydrolase family; 1.85A {Bacillus subtilis}
SCOP: c.69.1.2
Length = 361
Score = 55.6 bits (134), Expect = 1e-09
Identities = 23/102 (22%), Positives = 37/102 (36%), Gaps = 13/102 (12%)
Query: 58 TSDKTPVLVYIHGESFSWNS--GSVYDGTVLS-SFASMVVVTVNYRLGILGFLNPSKDYR 114
P LVY HG + + V+ + A VVV V++R
Sbjct: 105 VEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNA--WTAEGH---- 158
Query: 115 ARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGA 156
P+ G+ D +AA+ W+ E+ G + + G G
Sbjct: 159 HPFPS--GVEDCLAAVLWVDEHRESLGLSG--VVVQGESGGG 196
Score = 35.2 bits (81), Expect = 0.012
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Query: 7 TSDKTPVLVYIHGESFSWNS--GSVYDGTVLS-SFASMVVVTVNYRL 50
P LVY HG + + V+ + A VVV V++R
Sbjct: 105 VEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRN 151
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured
bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A*
3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Length = 322
Score = 55.0 bits (133), Expect = 2e-09
Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 18/97 (18%)
Query: 57 KTSDKTPVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRLGILGFLNPSKDYR 114
++Y+HG + S + + V +S + + ++YRL P
Sbjct: 75 PGCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLA------P----E 124
Query: 115 ARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMG 151
PA + D +AA W+ + G P ++S+ G
Sbjct: 125 HPFPA--AVEDGVAAYRWLLDQ----GFKPQHLSISG 155
Score = 41.1 bits (97), Expect = 1e-04
Identities = 9/47 (19%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 6 KTSDKTPVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRL 50
++Y+HG + S + + V +S + + ++YRL
Sbjct: 75 PGCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRL 121
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured
bacterium} PDB: 3dnm_A
Length = 322
Score = 53.8 bits (130), Expect = 5e-09
Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 18/92 (19%)
Query: 62 TPVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRLGILGFLNPSKDYRARIPA 119
++Y HG + S S + L+ +S + +++YRL P PA
Sbjct: 80 AAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLA------P----ENPFPA 129
Query: 120 NFGLLDQIAALHWIKENIGEFGGDPSNISLMG 151
+ D +AA + + G I + G
Sbjct: 130 --AVDDCVAAYRALLKT----AGSADRIIIAG 155
Score = 40.0 bits (94), Expect = 3e-04
Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 11 TPVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRL 50
++Y HG + S S + L+ +S + +++YRL
Sbjct: 80 AAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRL 121
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2,
protein structure initiative; 3.20A {Lactococcus lactis
subsp}
Length = 276
Score = 52.1 bits (125), Expect = 2e-08
Identities = 20/122 (16%), Positives = 40/122 (32%), Gaps = 15/122 (12%)
Query: 55 ESKTSDKTPVLVYIHGESFSWNSGSVYDGT-VLSSFASM--VVVTVNYRLGILGFLNPSK 111
+ P ++ G + S + + +F + V+ +NY +
Sbjct: 36 RQNENYTFPAIIICPGGG--YQHISQRESDPLALAFLAQGYQVLLLNYTVM------NKG 87
Query: 112 DYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAV--P 169
+ N L + A I +N E+ +P + L+G G + S + P
Sbjct: 88 TNYNFLSQN--LEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRP 145
Query: 170 DG 171
G
Sbjct: 146 KG 147
>3h04_A Uncharacterized protein; protein with unknown function, structural
genomics, MCSG, PS protein structure initiative; 1.90A
{Staphylococcus aureus subsp}
Length = 275
Score = 52.2 bits (125), Expect = 2e-08
Identities = 18/102 (17%), Positives = 31/102 (30%), Gaps = 20/102 (19%)
Query: 57 KTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASM--VVVTVNYRLGILGFLNPSKDYR 114
K V+VYIHG + + + ++ ++YRL P
Sbjct: 24 KNQPTKGVIVYIHGGGLMFGKANDLSP-QYIDILTEHYDLIQLSYRLL------P----E 72
Query: 115 ARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGA 156
+ + D A+ I+ I G +GA
Sbjct: 73 VSLDC--IIEDVYASFDAIQSQY-----SNCPIFTFGRSSGA 107
Score = 38.3 bits (89), Expect = 8e-04
Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Query: 6 KTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASM--VVVTVNYRL 50
K V+VYIHG + + + ++ ++YRL
Sbjct: 24 KNQPTKGVIVYIHGGGLMFGKANDLSP-QYIDILTEHYDLIQLSYRL 69
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor,
gibberellin, gibberellin signaling pathway, hydrolase,
nucleus, receptor, developmental protein; HET: GA3;
1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Length = 351
Score = 52.0 bits (125), Expect = 3e-08
Identities = 27/116 (23%), Positives = 41/116 (35%), Gaps = 30/116 (25%)
Query: 53 LDESKTSDKTPVLVYIHG-----ESFSWNSGSVYDGTV--LSSFASMVVVTVNYRLGILG 105
L++ D PV+++ HG S + ++YD L VVV+VNYR
Sbjct: 104 LEKPVDGDIVPVILFFHGGSFAHSSANS---AIYDTLCRRLVGLCKCVVVSVNYRR---- 156
Query: 106 FLNPSKDYRA---RIPANFGLLDQIAALHWIKEN--IGEFGGDPSNISLMGHGTGA 156
A P D AL+W+ + +I L G +G
Sbjct: 157 ---------APENPYPC--AYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGG 201
Score = 40.8 bits (96), Expect = 2e-04
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 10/51 (19%)
Query: 7 TSDKTPVLVYIHG-----ESFSWNSGSVYDGTV--LSSFASMVVVTVNYRL 50
D PV+++ HG S + ++YD L VVV+VNYR
Sbjct: 109 DGDIVPVILFFHGGSFAHSSANS---AIYDTLCRRLVGLCKCVVVSVNYRR 156
>3bjr_A Putative carboxylesterase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Length = 283
Score = 49.9 bits (119), Expect = 1e-07
Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 15/106 (14%)
Query: 54 DESKTSDKTPVLVYIHGESFSWNSGSVYDGT-VLSSFASM--VVVTVNYRLGILGFLNPS 110
D + P ++ + G S + V + +FA + Y L
Sbjct: 42 DTNAHQTNLPAIIIVPGGS--YTHIPVAQAESLAMAFAGHGYQAFYLEYTLL-------- 91
Query: 111 KDYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGA 156
D + A +LD A++ ++++ E+ DP I+ G G
Sbjct: 92 TDQQPLGLAP--VLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGG 135
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus
subsp}
Length = 326
Score = 45.8 bits (109), Expect = 2e-06
Identities = 12/95 (12%), Positives = 22/95 (23%), Gaps = 19/95 (20%)
Query: 59 SDKTPVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRLGILGFLNPSKDYRAR 116
++YIHG + + + ++ VV Y P
Sbjct: 93 HQIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKT------P----EFH 142
Query: 117 IPANFGLLDQIAALHWIKENIGEFGGDPSNISLMG 151
I + N+ +MG
Sbjct: 143 IDD--TFQAIQRVYDQLVS-----EVGHQNVVVMG 170
Score = 37.7 bits (88), Expect = 0.001
Identities = 7/45 (15%), Positives = 14/45 (31%), Gaps = 2/45 (4%)
Query: 8 SDKTPVLVYIHGESFSWNSGSVYDGTV--LSSFASMVVVTVNYRL 50
++YIHG + + + ++ VV Y
Sbjct: 93 HQIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPK 137
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 44.3 bits (104), Expect = 1e-05
Identities = 32/143 (22%), Positives = 44/143 (30%), Gaps = 39/143 (27%)
Query: 83 GTVLSSFASMVV-VTVNYRLG--ILGFLN-----PSKDYRARIPANFGL--LDQIAALHW 132
LS + + G IL +L P KDY IP + L + Q+A H+
Sbjct: 192 AETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLA--HY 249
Query: 133 IKENIGEFGG-DPSNI-----SLMGHGTG---AACINFLMTSPAVPDGEWSRF------- 176
+ + G P + GH G A I A D W F
Sbjct: 250 V--VTAKLLGFTPGELRSYLKGATGHSQGLVTAVAI-------AETD-SWESFFVSVRKA 299
Query: 177 LFFKFFQASR-HRVTSLMMLSTS 198
+ FF R + L S
Sbjct: 300 ITVLFFIGVRCYEAYPNTSLPPS 322
Score = 32.3 bits (73), Expect = 0.10
Identities = 31/173 (17%), Positives = 48/173 (27%), Gaps = 68/173 (39%)
Query: 47 NYRLGILDESKTSDKTPVLVYIHGESFSWNSG-------------SVYDGTVLSSFASMV 93
Y ILD + PV + IH F G ++ DG + + +
Sbjct: 1656 TYGFSILDIVINN---PVNLTIH---FGGEKGKRIRENYSAMIFETIVDGKLKTE---KI 1706
Query: 94 VVTVNYRLGILGFLNPSKDYRARIPANFGLLDQ------------IAALHWIKENIGEFG 141
+N F + GLL AA +K G
Sbjct: 1707 FKEINEHSTSYTFRSEK-----------GLLSATQFTQPALTLMEKAAFEDLKSK----G 1751
Query: 142 GDPSNISLMGHGTG-----AAC---INF-----------LMTSPAVPDGEWSR 175
P++ + GH G A+ ++ + AVP E R
Sbjct: 1752 LIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDELGR 1804
Score = 29.6 bits (66), Expect = 0.83
Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 43/124 (34%)
Query: 69 H--GESFSWNSGSVYDGTVLSSFASMVVVTVNYRLGILGFLNPSKDYRARIPANFGLL-- 124
H GE + V+S S+V V V YR G+ + +D R +N+G++
Sbjct: 1762 HSLGE----YAALASLADVMS-IESLVEV-VFYR-GMTMQVAVPRDELGR--SNYGMIAI 1812
Query: 125 --DQIA------ALHWIKENIGEFGGD---PSN---------ISLMGHGTGAA------C 158
++A AL ++ E +G+ G N + G A
Sbjct: 1813 NPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAA----GDLRALDTVTNV 1868
Query: 159 INFL 162
+NF+
Sbjct: 1869 LNFI 1872
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold,
structural genomics, joint cente structural genomics,
JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Length = 262
Score = 41.8 bits (98), Expect = 6e-05
Identities = 19/114 (16%), Positives = 32/114 (28%), Gaps = 23/114 (20%)
Query: 61 KTPVLVYIHGESFSWNSGSVYDGTVL-SSFAS--MVVVTVNYRLGILGFLNPSKDYRARI 117
+ V++HG W + + L S V +Y L P RI
Sbjct: 62 PVGLFVFVHGG--YWMAFDKSSWSHLAVGALSKGWAVAMPSYELC------P----EVRI 109
Query: 118 PANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVPDG 171
A+ + I L GH G + ++ +P+
Sbjct: 110 SE--ITQQISQAVTAAAKE------IDGPIVLAGHSAGGHLVARMLDPEVLPEA 155
Score = 28.7 bits (64), Expect = 1.4
Identities = 9/45 (20%), Positives = 15/45 (33%), Gaps = 5/45 (11%)
Query: 10 KTPVLVYIHGESFSWNSGSVYDGTVL-SSFAS--MVVVTVNYRLG 51
+ V++HG W + + L S V +Y L
Sbjct: 62 PVGLFVFVHGG--YWMAFDKSSWSHLAVGALSKGWAVAMPSYELC 104
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7;
2.10A {Thermoanaerobacterium SP}
Length = 346
Score = 38.7 bits (90), Expect = 7e-04
Identities = 25/120 (20%), Positives = 34/120 (28%), Gaps = 29/120 (24%)
Query: 57 KTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASMVVVTVNYRLGILGFLNPSKDYRAR 116
KT K P L+ HG +S NSG D + A VV ++ R G S+D
Sbjct: 103 KTEGKHPALIRFHG--YSSNSGDWNDKLNYVA-AGFTVVAMDVR----GQGGQSQDVGGV 155
Query: 117 IPANFG-------------------LLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAA 157
LD + D + +MG G
Sbjct: 156 TGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMN---MPEVDEDRVGVMGPSQGGG 212
Score = 30.6 bits (69), Expect = 0.36
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 6 KTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASMVVVTVNYR 49
KT K P L+ HG +S NSG D + A VV ++ R
Sbjct: 103 KTEGKHPALIRFHG--YSSNSGDWNDKLNYVA-AGFTVVAMDVR 143
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics,
JOIN for structural genomics, JCSG; 2.69A {Xanthomonas
campestris PV}
Length = 290
Score = 38.3 bits (89), Expect = 0.001
Identities = 18/101 (17%), Positives = 36/101 (35%), Gaps = 16/101 (15%)
Query: 60 DKTPVLVYIHGESFSWNSGSVYDGTVLS-SFASM--VVVTVNYRLGILGFLNPSKDYRAR 116
P ++++HG GS + V + + + +T + R G + ++
Sbjct: 26 TGMPGVLFVHG-----WGGSQHHSLVRAREAVGLGCICMTFDLR----GHEGYASMRQSV 76
Query: 117 IPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAA 157
A L D AA + D +I+++G G
Sbjct: 77 TRAQN-LDDIKAAYDQLAS---LPYVDAHSIAVVGLSYGGY 113
Score = 26.3 bits (58), Expect = 7.2
Identities = 8/44 (18%), Positives = 18/44 (40%), Gaps = 8/44 (18%)
Query: 9 DKTPVLVYIHGESFSWNSGSVYDGTVLS-SFASM--VVVTVNYR 49
P ++++HG GS + V + + + +T + R
Sbjct: 26 TGMPGVLFVHG-----WGGSQHHSLVRAREAVGLGCICMTFDLR 64
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl
oligopeptidase family, serine PR proline-specific
peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas
gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Length = 706
Score = 37.4 bits (87), Expect = 0.002
Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 24/114 (21%)
Query: 53 LDESKTSDKTPVLVYIHGE------SFSWNSGSVYDGTVLSSFASMVVVTVNYRLGILGF 106
D +K K PV+VY++G + +W S ++ V TV+ R G
Sbjct: 479 FDPAK---KYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQK-GYAVFTVDSR----GS 530
Query: 107 LNPSKDYRARIPANFG---LLDQIAALHWIKEN--IGEFGGDPSNISLMGHGTG 155
N + I G + DQ+ + ++K + D I + G G
Sbjct: 531 ANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWV-----DADRIGVHGWSYG 579
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase
6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG
NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1
c.69.1.24
Length = 723
Score = 37.1 bits (86), Expect = 0.003
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 25/136 (18%)
Query: 53 LDESKTSDKTPVLVYIHGESFS---WNSGSVYDGTVLSSFASMVVVTVNYRLGILGFLNP 109
++ P+L+ + G S V TV+ S VVV + R G
Sbjct: 490 FTDTT---HYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGR----GSGFQ 542
Query: 110 SKDYRARIPANFG---LLDQIAALHWIKEN--IGEFGGDPSNISLMGHGTGAACINFLMT 164
+ G DQ+ A+ + + I D + +++ G G ++
Sbjct: 543 GTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYI-----DRTRVAVFGKDYGG-----YLS 592
Query: 165 SPAVPDGEWSRFLFFK 180
+ +P ++ F
Sbjct: 593 TYILPAKGENQGQTFT 608
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase
family S9, hydrolase; 2.80A {Stenotrophomonas
maltophilia}
Length = 741
Score = 36.2 bits (84), Expect = 0.005
Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 31/115 (26%)
Query: 53 LDESKTSDKTPVLVYIHG--------ESFSWNSGSVYDGTVLSSFASM--VVVTVNYRLG 102
D +K + PV VY++G +S+ +++ A VV +++ R
Sbjct: 511 FDPAK---RYPVAVYVYGGPASQTVTDSWPGRGDHLFN----QYLAQQGYVVFSLDNR-- 561
Query: 103 ILGFLNPSKDYRARIPANFG---LLDQIAALHWIKEN--IGEFGGDPSNISLMGH 152
G +D+ + G + DQ+ + W+K+ + DP+ I + G
Sbjct: 562 --GTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWV-----DPARIGVQGW 609
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta
propeller, hydrolase, oligop SIZE selectivity; HET: GOL;
1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A*
1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Length = 582
Score = 35.9 bits (83), Expect = 0.006
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 26/105 (24%)
Query: 57 KTSDKTPVLVYIHG-----ESFSWNSGSVYDGTVLSSFASM--VVVTVNYRLGILGFLNP 109
+ P +V +HG +S SW++ + A+ VV NYR G G+
Sbjct: 355 RAPTPGPTVVLVHGGPFAEDSDSWDTFAAS-------LAAAGFHVVMPNYR-GSTGY--- 403
Query: 110 SKDYRARIPANFGLLDQ---IAALHWIKENIGEFGGDPSNISLMG 151
+++R +I + + AA W +E+ G S + +MG
Sbjct: 404 GEEWRLKIIGDPCGGELEDVSAAARWARES-----GLASELYIMG 443
Score = 27.1 bits (60), Expect = 4.4
Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 14/51 (27%)
Query: 6 KTSDKTPVLVYIHG-----ESFSWNSGSVYDGTVLSSFASM--VVVTVNYR 49
+ P +V +HG +S SW++ + A+ VV NYR
Sbjct: 355 RAPTPGPTVVLVHGGPFAEDSDSWDTFAAS-------LAAAGFHVVMPNYR 398
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes,
novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A
{Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A*
2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A*
1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A*
3bjm_A* 3eio_A* ...
Length = 740
Score = 36.0 bits (83), Expect = 0.006
Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 20/111 (18%)
Query: 53 LDESKTSDKTPVLVYIHGESFS---WNSGSVYDGTVLSSFASMVVVTVNYRLGILGFLNP 109
D+SK K P+L+ ++ S + T L+S +++V + + R G
Sbjct: 496 FDKSK---KYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGR----GSGYQ 548
Query: 110 SKDYRARIPANFG---LLDQIAALHWIKEN--IGEFGGDPSNISLMGHGTG 155
I G + DQI A + + D I++ G G
Sbjct: 549 GDKIMHAINRRLGTFEVEDQIEAARQFSKMGFV-----DNKRIAIWGWSYG 594
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading
enzyme, RICE, virulence, innate immune responses,
pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A
3h2k_A* 3h2h_A 3h2i_A
Length = 397
Score = 35.7 bits (81), Expect = 0.009
Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 12/110 (10%)
Query: 57 KTSDKTPVLVYIHGESF-------SWNSGSVYDGTVLSSFAS--MVVVTVNYRLGILGFL 107
+ S P+L + H + D +++ AS VVV +Y G+
Sbjct: 74 RCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYL-GLGKSN 132
Query: 108 NPSKDYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAA 157
Y +D + A + +++ + L G+ G
Sbjct: 133 YAYHPYLHSASEASATIDAMRAARSVLQHLK--TPLSGKVMLSGYSQGGH 180
Score = 27.2 bits (59), Expect = 4.4
Identities = 11/53 (20%), Positives = 19/53 (35%), Gaps = 9/53 (16%)
Query: 6 KTSDKTPVLVYIHGESF-------SWNSGSVYDGTVLSSFAS--MVVVTVNYR 49
+ S P+L + H + D +++ AS VVV +Y
Sbjct: 74 RCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYL 126
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces
morookaensis} PDB: 3azp_A 3azq_A
Length = 662
Score = 35.6 bits (82), Expect = 0.010
Identities = 24/116 (20%), Positives = 39/116 (33%), Gaps = 24/116 (20%)
Query: 61 KTPVLVYIHG-----ESFSWNSGSVYDGTVLSSFAS--MVVVTVNYRLGILGFLNPSKDY 113
P +V HG + Y F S + V VNY G G+ + Y
Sbjct: 423 LPPYVVMAHGGPTSRVPAVLDLDVAY-------FTSRGIGVADVNYG-GSTGY---GRAY 471
Query: 114 RARIPANFGLLDQ---IAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSP 166
R R+ +G++D A + E D + +++ G G + S
Sbjct: 472 RERLRGRWGVVDVEDCAAVATAL---AEEGTADRARLAVRGGSAGGWTAASSLVST 524
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast
activation protein alpha,fapalpha,
dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo
sapiens}
Length = 719
Score = 33.7 bits (77), Expect = 0.038
Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 17/120 (14%)
Query: 44 VTVNYRLGILDESKTSDKTPVLVYIHGESFS---WNSGSVYDGTVLSSFASMVVVTVNYR 100
+T+ Y++ + + S K P+L+ ++G S + +V + L+S MV+ V+ R
Sbjct: 478 ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGR 537
Query: 101 LGILGFLNPSKDYRARIPANFG---LLDQIAALHWIKEN--IGEFGGDPSNISLMGHGTG 155
G + G + DQI A+ E I D I++ G G
Sbjct: 538 ----GTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFI-----DEKRIAIWGWSYG 588
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 1.60A {Thermus thermophilus} SCOP:
c.69.1.27
Length = 238
Score = 32.0 bits (72), Expect = 0.094
Identities = 17/136 (12%), Positives = 38/136 (27%), Gaps = 10/136 (7%)
Query: 61 KTPVLVYIHGESFSWNSGSVYDGTVLSSFASM--VVVTVNYRL-GILGFLNPSKDYRARI 117
+L+ +HG + +L +A +++ + G PS ++
Sbjct: 23 PKALLLALHG----LQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPS--SKSPR 76
Query: 118 PANFGLLDQIAALHWIKENIGEFG-GDPSNISLMGHGTGAACINFLMTSPAVPDGEWSRF 176
+ + E + L G GA + L+ P G +
Sbjct: 77 YVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFI 136
Query: 177 LFFKFFQASRHRVTSL 192
+ + +V
Sbjct: 137 GSGFPMKLPQGQVVED 152
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas
mendocina}
Length = 258
Score = 31.9 bits (72), Expect = 0.12
Identities = 24/154 (15%), Positives = 43/154 (27%), Gaps = 22/154 (14%)
Query: 54 DESKTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFAS--MVVVTVNYRLGILGFLNPSK 111
D + + PV+++ +G + S Y G +LS +AS VV +
Sbjct: 41 DLGQGGVRHPVILWGNG---TGAGPSTYAG-LLSHWASHGFVVAAAETS-----NAGTGR 91
Query: 112 DYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSP----A 167
+ A + D + K + + GH G
Sbjct: 92 EMLACLDYLVRENDTPYGTYSGK-------LNTGRVGTSGHSQGGGGSIMAGQDTRVRTT 144
Query: 168 VPDGEWSRFLFFKFFQASRHRVTSLMMLSTSSNI 201
P ++ L R + +M I
Sbjct: 145 APIQPYTLGLGHDSASQRRQQGPMFLMSGGGDTI 178
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP:
c.69.1.16
Length = 262
Score = 31.2 bits (70), Expect = 0.18
Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 20/98 (20%)
Query: 63 PVLVYIHGESFSWNSGSVYDGTVLSSFASM--VVVTVNYRLGILGFLNPSKDYRARIPAN 120
+V G + +S + AS VV T++ D R R
Sbjct: 55 GAVVISPGFTAYQSSIAWL----GPRLASQGFVVFTIDTN-----TTLDQPDSRGR---- 101
Query: 121 FGLLDQIAALHWIKENIGEFGG-DPSNISLMGHGTGAA 157
++AL ++ + D + + +MGH G
Sbjct: 102 ----QLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGG 135
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga
maritima} PDB: 3doi_A
Length = 380
Score = 30.0 bits (67), Expect = 0.51
Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 32/174 (18%)
Query: 7 TSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASMVVVTVNYRLGI---LDESKTSDKTP 63
TS +T I + ++ G + YRL + ++ + K P
Sbjct: 130 TSKQTDEKHLIIDDFLAFTFKDPETGVEI-----------PYRLFVPKDVNPDR---KYP 175
Query: 64 VLVYIHG--ESFSWNSGSVYDGTVLSSFAS--------MVVVTVNYRLGILGFLNPSKDY 113
++V++HG E + N V +A V+ + S +
Sbjct: 176 LVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNS----SWSTLF 231
Query: 114 RARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGA-ACINFLMTSP 166
R +A + I++ + E+ D + I + G G +M P
Sbjct: 232 TDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFP 285
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha
sandwich, structural genomics, PSI-2; 1.83A {Bordetella
parapertussis 12822}
Length = 304
Score = 29.3 bits (64), Expect = 1.00
Identities = 17/107 (15%), Positives = 31/107 (28%), Gaps = 7/107 (6%)
Query: 59 SDKTPVLVYIHGESFSWNSGSVYDG-TVLSSFASMVVVTVNYRL----GILGFLNPSKDY 113
+ PV+V HG N D + +++V + G+ + N
Sbjct: 51 TPDRPVVVVQHG--VLRNGADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFT 108
Query: 114 RARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACIN 160
A P + + D + L GH G ++
Sbjct: 109 AAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVH 155
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR
structure initiative, PSI, joint center for structural
GENO hydrolase; 2.10A {Thermotoga maritima} SCOP:
c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Length = 337
Score = 28.0 bits (62), Expect = 2.3
Identities = 19/129 (14%), Positives = 32/129 (24%), Gaps = 36/129 (27%)
Query: 61 KTPVLVYIHGESFSWNSGSVYDGTVLSSFASMVVVTVNYR-------------------- 100
K P +V G ++ G +D S + ++ R
Sbjct: 94 KLPCVVQYIG--YNGGRGFPHDWLFWPS-MGYICFVMDTRGQGSGWLKGDTPDYPEGPVD 150
Query: 101 -----LGILGFLNPSKDYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTG 155
G L+P Y R+ D + A+ D I + G G
Sbjct: 151 PQYPGFMTRGILDPRTYYYRRV-----FTDAVRAVEAAAS---FPQVDQERIVIAGGSQG 202
Query: 156 AACINFLMT 164
+
Sbjct: 203 GGIALAVSA 211
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha
sandwich, PSI, protein structure initiative; 1.50A
{Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A
3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Length = 318
Score = 27.4 bits (61), Expect = 3.3
Identities = 19/122 (15%), Positives = 33/122 (27%), Gaps = 20/122 (16%)
Query: 57 KTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASMVVVTVNYRLGILGFLNPSKDYRAR 116
P +V HG + S+ G +++ + + R G + S
Sbjct: 77 DKEGPHPAIVKYHGYNASY-DGEIHEMVNWAL-HGYATFGMLVR-GQQRSEDTSISPHGH 133
Query: 117 IPANF--GLLDQ------------IAALHWIKENIGEFGGDPSNISLMGHGTGAACINFL 162
G+LD+ + AL I D + I + G G
Sbjct: 134 ALGWMTKGILDKDTYYYRGVYLDAVRALEVISSF---DEVDETRIGVTGGSQGGGLTIAA 190
Query: 163 MT 164
Sbjct: 191 AA 192
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty
acid synthase, acyl-carrier-protein, beta-ketoacyl RED
beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces
cerevisiae}
Length = 1688
Score = 27.5 bits (61), Expect = 4.4
Identities = 10/32 (31%), Positives = 11/32 (34%), Gaps = 7/32 (21%)
Query: 133 IKENIGEFGGDPSNI-------SLMGHGTGAA 157
I E + G N L GH GAA
Sbjct: 1358 INEMMKHLGRSEGNPVIGVFQKFLTGHPKGAA 1389
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase
fold, structural genomics, structural G of pathogenic
protozoa consortium; 2.20A {Trypanosoma brucei}
Length = 335
Score = 26.6 bits (58), Expect = 6.3
Identities = 16/115 (13%), Positives = 34/115 (29%), Gaps = 13/115 (11%)
Query: 56 SKTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASMVVVTVNYRLGILGFLNPSKDYRA 115
D ++++ G++ S S + V V G +G + A
Sbjct: 32 MMNMDARRCVLWVGGQTESLLSFDYFTNLAEELQGDWAFVQVEVPSGKIGSGPQDHAHDA 91
Query: 116 RIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVPD 170
+ L I + + + ++L TG + L+ + A
Sbjct: 92 E---------DVDDL--IGILLRDHCMNE--VALFATSTGTQLVFELLENSAHKS 133
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic
DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38
PDB: 2gzr_A*
Length = 278
Score = 26.1 bits (57), Expect = 8.8
Identities = 8/67 (11%), Positives = 13/67 (19%), Gaps = 11/67 (16%)
Query: 130 LHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAV--------PDGEWSRFLFFKF 181
+++ D L GH G + S + P
Sbjct: 129 APKVEQG---LNIDRQRRGLWGHSYGGLFVLDSWLSSSYFRSYYSASPSLGRGYDALLSR 185
Query: 182 FQASRHR 188
A
Sbjct: 186 VTAVEPL 192
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.133 0.394
Gapped
Lambda K H
0.267 0.0586 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,207,272
Number of extensions: 186590
Number of successful extensions: 586
Number of sequences better than 10.0: 1
Number of HSP's gapped: 490
Number of HSP's successfully gapped: 105
Length of query: 209
Length of database: 6,701,793
Length adjustment: 89
Effective length of query: 120
Effective length of database: 4,216,824
Effective search space: 506018880
Effective search space used: 506018880
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.3 bits)