RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14924
(209 letters)
>d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 571
Score = 76.7 bits (187), Expect = 5e-17
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 58 TSDKTPVLVYIHGESFSWNSGS--VYDGTVLSSFASMVVVTVNYRLGILGFLNP----SK 111
T++ P+L++I+G F S + +Y+ ++++ +++V + YR+G GFL+
Sbjct: 135 TTNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPS 194
Query: 112 DYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVPDG 171
++ P N GL DQ A+ W+K+N FGG+P ++L G G++ +N + SP
Sbjct: 195 EFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGL 254
Query: 172 EWSRFLFFKFFQASRHRVTSLMML 195
+ A +TS +
Sbjct: 255 VKRGMMQSGTMNAPWSHMTSEKAV 278
>d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver
carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]}
Length = 532
Score = 69.8 bits (169), Expect = 1e-14
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 55 ESKTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASMVVVTVNYRLGILGFLNPSKDYR 114
+ ++ PV+V+IHG + S YDG L++ ++VVVT+ YRLGI GF +
Sbjct: 106 DLTKKNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFS---TGD 162
Query: 115 ARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVPDGEWS 174
N+G LDQ+AAL W+++NI FGG+P ++++ G G ++ L+ SP +
Sbjct: 163 EHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHR 222
Query: 175 RFLFF 179
Sbjct: 223 AISES 227
Score = 35.9 bits (81), Expect = 0.003
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 3 NESKTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASMVVVTVNYRLGI 52
+ ++ PV+V+IHG + S YDG L++ ++VVVT+ YRLGI
Sbjct: 105 ADLTKKNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGI 154
>d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 542
Score = 67.8 bits (164), Expect = 5e-14
Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 55 ESKTSDKTPVLVYIHGESFSWNSGS--VYDGTVLSSFASMVVVTVNYRLGILGFLNPSKD 112
+ + TPVL++I+G F + S VYDG L+ V+V++NYR+G GFL
Sbjct: 105 YPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGS 164
Query: 113 YRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMT 164
A P N GLLDQ AL W++ENI FGGDP +++L G GAA + +
Sbjct: 165 REA--PGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHIL 214
>d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId:
5061]}
Length = 517
Score = 67.1 bits (162), Expect = 8e-14
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 56 SKTSDKTPVLVYIHGESFSWNSGSVYDGTVL--SSFASMVVVTVNYRLGILGFLNPSKDY 113
+ + K PV ++I G ++ NS + Y+GT + +S +V VT NYR+G LGFL S+
Sbjct: 91 ATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFL-ASEKV 149
Query: 114 RARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVPDGEW 173
R N GLLDQ AL W+K+ I +FGGDP +I + G GA + + +++ D
Sbjct: 150 RQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGL 209
Query: 174 SRF 176
Sbjct: 210 FIG 212
>d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida
cylindracea, cholesterol esterase [TaxId: 44322]}
Length = 534
Score = 63.2 bits (152), Expect = 2e-12
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 6/150 (4%)
Query: 56 SKTSDKTPVLVYIHGESFSWNSGSVYDGTV-----LSSFASMVVVTVNYRLGILGFLNPS 110
+K PV+++I G F S +++ + ++ V VNYR+ GFL
Sbjct: 108 TKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGD 167
Query: 111 KDYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVPD 170
N GL DQ + W+ +NI FGGDPS +++ G G+ + + +
Sbjct: 168 DIKA-EGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDN 226
Query: 171 GEWSRFLFFKFFQASRHRVTSLMMLSTSSN 200
+ LF S V S + T N
Sbjct: 227 TYKGKPLFRAGIMQSGAMVPSDPVDGTYGN 256
>d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol
esterase) {Cow (Bos taurus) [TaxId: 9913]}
Length = 579
Score = 61.6 bits (148), Expect = 6e-12
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 56 SKTSDKTPVLVYIHGESFSWNSGS--------VYDGTVLSSFASMVVVTVNYRLGILGFL 107
+ S PV+++I+G +F + +YDG +++ +++VVT NYR+G L
Sbjct: 92 KEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGP---L 148
Query: 108 NPSKDYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPA 167
+ +P N+GL DQ A+ W+K NI FGGDP I+L G G A L T
Sbjct: 149 GFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGAS-VSLQTLSP 207
Query: 168 VPDGEWSRFLF 178
G R +
Sbjct: 208 YNKGLIKRAIS 218
>d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray
(Torpedo californica) [TaxId: 7787]}
Length = 532
Score = 61.3 bits (147), Expect = 9e-12
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 56 SKTSDKTPVLVYIHGESFSWNSGS--VYDGTVLSSFASMVVVTVNYRLGILGFLNPSKDY 113
S T V+V+I+G F S + VY+G L+ +V+V+++YR+G GF +
Sbjct: 100 SPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGF--LALHG 157
Query: 114 RARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSP 166
P N GLLDQ AL W+ +NI FGGDP +++ G G A + + SP
Sbjct: 158 SQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSP 210
>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB
esterase) {Bacillus subtilis [TaxId: 1423]}
Length = 483
Score = 60.9 bits (146), Expect = 1e-11
Identities = 49/120 (40%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 56 SKTSDKTPVLVYIHGESFSWNSGSVY--DGTVLSSFASMVVVTVNYRLGILGFLNPSKDY 113
S PV+V+IHG +F +GS DG+ L++ ++VVT+NYRLG GFL +
Sbjct: 90 DTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFL-HLSSF 148
Query: 114 RARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVPDGEW 173
N GLLDQ AAL W++ENI FGGDP N+++ G G I L+ PA
Sbjct: 149 DEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQ 208
>d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus
fulgidus [TaxId: 2234]}
Length = 311
Score = 44.7 bits (104), Expect = 2e-06
Identities = 26/106 (24%), Positives = 37/106 (34%), Gaps = 14/106 (13%)
Query: 60 DKTPVLVYIHGESFSWNSGSVYDGTVL--SSFASMVVVTVNYRLGILGFLNPSKDYRARI 117
+PVLVY HG F S +D + ++ VV+V+YRL +
Sbjct: 77 PDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDA 136
Query: 118 PANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLM 163
W+ EN E DPS I + G G +
Sbjct: 137 T------------KWVAENAEELRIDPSKIFVGGDSAGGNLAAAVS 170
Score = 30.5 bits (67), Expect = 0.12
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 9 DKTPVLVYIHGESFSWNSGSVYDGTVL--SSFASMVVVTVNYRLG 51
+PVLVY HG F S +D + ++ VV+V+YRL
Sbjct: 77 PDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLA 121
>d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId:
1831]}
Length = 317
Score = 41.0 bits (94), Expect = 5e-05
Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 10/104 (9%)
Query: 49 RLGILDESKTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASMVVVTVNYRLGILGFLN 108
++ + T+ PVL++IHG F+ + D + + N
Sbjct: 65 KIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVE-------- 116
Query: 109 PSKDYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGH 152
+ D AAL +I + E G DPS I++ G
Sbjct: 117 --YRLAPETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQ 158
Score = 26.7 bits (57), Expect = 2.1
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 6 KTSDKTPVLVYIHGESFSWNSGSVYDG 32
T+ PVL++IHG F+ + D
Sbjct: 73 NTAGPVPVLLWIHGGGFAIGTAESSDP 99
>d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis
[TaxId: 1773]}
Length = 288
Score = 33.0 bits (74), Expect = 0.020
Identities = 12/107 (11%), Positives = 27/107 (25%), Gaps = 2/107 (1%)
Query: 60 DKTPVLVYIHGE-SFSWNSGSVYDGTVLSSFASMVVVTVNYRLGILGFLNPSKDYRARIP 118
+P L + G + SG + + + V G F +
Sbjct: 32 ANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKA 91
Query: 119 ANFGLLDQIAALHWIKENI-GEFGGDPSNISLMGHGTGAACINFLMT 164
+ + + P+ +++G A+ L
Sbjct: 92 GCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAI 138
>d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic
domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]}
Length = 246
Score = 32.2 bits (72), Expect = 0.029
Identities = 14/108 (12%), Positives = 31/108 (28%), Gaps = 6/108 (5%)
Query: 58 TSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASMVVVTVNYRLGILGFLNPSKDYRARI 117
T+++ P+ V + GE ++ + T L+ + + +
Sbjct: 40 TAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVL-----IDAIDTTHRAHEL 94
Query: 118 PANFGLLDQIA-ALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMT 164
P N + L + + I F + G G +
Sbjct: 95 PCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGL 142
Score = 24.5 bits (52), Expect = 9.2
Identities = 7/42 (16%), Positives = 17/42 (40%)
Query: 7 TSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASMVVVTVNY 48
T+++ P+ V + GE ++ + T L+ +
Sbjct: 40 TAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVL 81
>d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492
{Silicibacter sp. tm1040 [TaxId: 292414]}
Length = 261
Score = 31.9 bits (71), Expect = 0.036
Identities = 15/121 (12%), Positives = 34/121 (28%), Gaps = 17/121 (14%)
Query: 63 PVLVYIHGESFSWNSGSVYDGTVLSSFASMVVVTVNYRLGILGFLNPSKDYRARIPANFG 122
+ V++HG W + S ++ ++ + + + RI
Sbjct: 63 GLFVFVHGG--YWMAFDKSS----WSHLAVGALSKGW---AVAMPSYELCPEVRISEITQ 113
Query: 123 LLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVPDGEWSRFLFFKFF 182
A+ + I L GH G + ++ +P+ +R
Sbjct: 114 --QISQAVTAAAKEIDGPIV------LAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPI 165
Query: 183 Q 183
Sbjct: 166 S 166
>d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 263
Score = 31.8 bits (70), Expect = 0.045
Identities = 8/53 (15%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Query: 4 ESKTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSF-------ASMVVVTVNYR 49
+ + + ++YIHG +++ + D L++ +++ ++ YR
Sbjct: 24 QEISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYR 76
Score = 31.8 bits (70), Expect = 0.045
Identities = 8/53 (15%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Query: 55 ESKTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSF-------ASMVVVTVNYR 100
+ + + ++YIHG +++ + D L++ +++ ++ YR
Sbjct: 24 QEISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYR 76
>d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis,
brefeldin A esterase [TaxId: 1423]}
Length = 358
Score = 31.7 bits (70), Expect = 0.056
Identities = 24/118 (20%), Positives = 39/118 (33%), Gaps = 11/118 (9%)
Query: 49 RLGILDESKTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSF---ASMVVVTVNYRLGILG 105
L + + P LVY HG + + + A VVV V++R
Sbjct: 93 TLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTA 152
Query: 106 FLNPSKDYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLM 163
+ P G+ D +AA+ W+ E+ G + G A L+
Sbjct: 153 EGHH--------PFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLL 202
>d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26,
C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 258
Score = 28.6 bits (62), Expect = 0.52
Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Query: 53 LDESKTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFAS---MVVVTVNYR 100
D+SK K P+L+ ++ S + +V+ + AS ++V + + R
Sbjct: 26 FDKSK---KYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGR 73
Score = 27.9 bits (60), Expect = 0.84
Identities = 10/45 (22%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 8 SDKTPVLVYIHGESFSWNSGSVYDGTVLSSFAS---MVVVTVNYR 49
S K P+L+ ++ S + +V+ + AS ++V + + R
Sbjct: 29 SKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGR 73
>d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like
protein 6, DPP6, C-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 258
Score = 27.4 bits (59), Expect = 1.3
Identities = 21/127 (16%), Positives = 44/127 (34%), Gaps = 10/127 (7%)
Query: 53 LDESKTSDKTPVLVYIHGESFSW---NSGSVYDGTVLSSFASMVVVTVNYRLGILGFLNP 109
++ P+L+ + G S V TV+ S VVV + R G
Sbjct: 25 FTDTT---HYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGR----GSGFQ 77
Query: 110 SKDYRARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVP 169
+ GLL++ + ++ + E D + +++ G G +++ +
Sbjct: 78 GTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGEN 137
Query: 170 DGEWSRF 176
G+
Sbjct: 138 QGQTFTC 144
Score = 25.9 bits (55), Expect = 3.6
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Query: 8 SDKTPVLVYIHGESFSW---NSGSVYDGTVLSSFASMVVVTVNY 48
+ P+L+ + G S V TV+ S VVV +
Sbjct: 28 TTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDG 71
>d2imla1 b.45.1.4 (A:1-189) Hypothetical protein AF1834
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 189
Score = 26.0 bits (57), Expect = 2.8
Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 7/57 (12%)
Query: 89 FASMVVVTVNY-RLGILGFLNPSKDYRARIPANFGLLD------QIAALHWIKENIG 138
++++ V+ R + K+ RI ++ + A I E IG
Sbjct: 133 LSAVIEALVHATRYVAIKSDERRKELLERIHYYREIVQKCGSEREKRAFEIIMEKIG 189
>d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the
cellulosomal xylanase y {Clostridium thermocellum
[TaxId: 1515]}
Length = 273
Score = 25.5 bits (54), Expect = 4.6
Identities = 10/112 (8%), Positives = 30/112 (26%), Gaps = 6/112 (5%)
Query: 58 TSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASMVVVTVNYRLGILGFLNPSKDYRARI 117
+ K + +HG + N+ D + + ++ L ++ + A+
Sbjct: 51 PNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQN 110
Query: 118 PANF------GLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLM 163
++ + + + G G ++M
Sbjct: 111 FYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVM 162
>d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme,
C-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Length = 260
Score = 25.6 bits (54), Expect = 5.2
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 6 KTSDKTPVLVYIHGESFSWNSGS 28
+ P +V +HG F+ +S S
Sbjct: 34 RAPTPGPTVVLVHGGPFAEDSDS 56
Score = 25.6 bits (54), Expect = 5.2
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 57 KTSDKTPVLVYIHGESFSWNSGS 79
+ P +V +HG F+ +S S
Sbjct: 34 RAPTPGPTVVLVHGGPFAEDSDS 56
>d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal
domain {Rhodococcus sp. mb1 [TaxId: 51612]}
Length = 347
Score = 25.5 bits (54), Expect = 5.9
Identities = 19/130 (14%), Positives = 30/130 (23%), Gaps = 4/130 (3%)
Query: 57 KTSDKTPVLVYIHGESFSWNSGSVYDGTVLSSFASM--VVVTVNYRLGILGFLNPSKDYR 114
PVL+ + T F VV + R
Sbjct: 26 DADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPHVD 85
Query: 115 ARIPANFGLLDQIAALHWIKENIGEFGGDPSNISLMGHGTGAACINFLMTSPAVPDGEWS 174
A L I W N+G FG + +P++ +
Sbjct: 86 DEADAED-TLSWILEQAWCDGNVGMFGVS-YLGVTQWQAAVSGVGGLKAIAPSMASADLY 143
Query: 175 RFLFFKFFQA 184
R ++ A
Sbjct: 144 RAPWYGPGGA 153
>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 164
Score = 24.3 bits (52), Expect = 9.8
Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 7/78 (8%)
Query: 122 GLLDQIAALHWIKENIGEFGGDPSNISLM---GHGTGAACINFLMTSPAVPDGEW-SRFL 177
G+LD +I E G ++ M GHG + T +P E+ +
Sbjct: 2 GVLDAARYRTFIAM---EAGVSVKDVQAMLMGGHGDEMVPLPRFSTISGIPVSEFIAPDR 58
Query: 178 FFKFFQASRHRVTSLMML 195
+ + +R ++ L
Sbjct: 59 LAQIVERTRKGGGEIVNL 76
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.133 0.394
Gapped
Lambda K H
0.267 0.0447 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 781,166
Number of extensions: 34945
Number of successful extensions: 153
Number of sequences better than 10.0: 1
Number of HSP's gapped: 145
Number of HSP's successfully gapped: 40
Length of query: 209
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 128
Effective length of database: 1,295,466
Effective search space: 165819648
Effective search space used: 165819648
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.1 bits)