BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14927
(1074 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RNM|A Chain A, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|B Chain B, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|C Chain C, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|D Chain D, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
Length = 495
Score = 345 bits (885), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 180/283 (63%), Positives = 213/283 (75%), Gaps = 22/283 (7%)
Query: 811 YHLA-TKLFTQAGDK--GVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKIT 867
YH+A K F G + V+LNL+ MM KS AVKALTGGIAHLFK NKV +NG+GKIT
Sbjct: 84 YHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKIT 143
Query: 868 GPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVSSTGALSLKK------ 921
G N VT K+DG T+ + TKNILIATGSEVTPFPGI +DE+TIVSSTGALSLKK
Sbjct: 144 GKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMV 203
Query: 922 -----------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTK 970
GSVW RLGA+VTA+EF+ +GG+GID E++K FQRIL KQG +FKL TK
Sbjct: 204 VIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTK 263
Query: 971 VTGASKSGDN-ITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGR 1029
VTGA+K D I V+IE K E ++CD LLVC+GRRP+T NLGLEE+GIE D +GR
Sbjct: 264 VTGATKKSDGKIDVSIEAASG-GKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGR 322
Query: 1030 VPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAG 1072
+PVN+RFQT IPNI+AIGD + GPMLAHKAEDEGI+CVEG+AG
Sbjct: 323 IPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAG 365
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 62/78 (79%), Positives = 70/78 (89%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
GIEYKVGKFPFAANSRAKTN DTDG VK+LG K TD+VLG HI+GP AGE++NEA LA+E
Sbjct: 399 GIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALE 458
Query: 512 YGASCEDVARTCHAHPTV 529
YGASCED+AR CHAHPT+
Sbjct: 459 YGASCEDIARVCHAHPTL 476
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 68/79 (86%)
Query: 528 TVCVEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGT 587
TVC+EKN+TLGGTCLNVGCIPSKALLNNSHYYHMAH D +RGIE+ V+LNL+ MM
Sbjct: 53 TVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQ 112
Query: 588 KSAAVKALTGGIAHLFKSN 606
KS AVKALTGGIAHLFK N
Sbjct: 113 KSTAVKALTGGIAHLFKQN 131
>pdb|1ZY8|A Chain A, The Crystal Structure Of Dihydrolipoamide Dehydrogenase And
Dihydrolipoamide Dehydrogenase-Binding Protein (Didomain)
Subcomplex Of Human Pyruvate Dehydrogenase Complex.
pdb|1ZY8|B Chain B, The Crystal Structure Of Dihydrolipoamide Dehydrogenase And
Dihydrolipoamide Dehydrogenase-Binding Protein (Didomain)
Subcomplex Of Human Pyruvate Dehydrogenase Complex.
pdb|1ZY8|C Chain C, The Crystal Structure Of Dihydrolipoamide Dehydrogenase And
Dihydrolipoamide Dehydrogenase-Binding Protein (Didomain)
Subcomplex Of Human Pyruvate Dehydrogenase Complex.
pdb|1ZY8|D Chain D, The Crystal Structure Of Dihydrolipoamide Dehydrogenase And
Dihydrolipoamide Dehydrogenase-Binding Protein (Didomain)
Subcomplex Of Human Pyruvate Dehydrogenase Complex.
pdb|1ZY8|E Chain E, The Crystal Structure Of Dihydrolipoamide Dehydrogenase And
Dihydrolipoamide Dehydrogenase-Binding Protein (Didomain)
Subcomplex Of Human Pyruvate Dehydrogenase Complex.
pdb|1ZY8|F Chain F, The Crystal Structure Of Dihydrolipoamide Dehydrogenase And
Dihydrolipoamide Dehydrogenase-Binding Protein (Didomain)
Subcomplex Of Human Pyruvate Dehydrogenase Complex.
pdb|1ZY8|G Chain G, The Crystal Structure Of Dihydrolipoamide Dehydrogenase And
Dihydrolipoamide Dehydrogenase-Binding Protein (Didomain)
Subcomplex Of Human Pyruvate Dehydrogenase Complex.
pdb|1ZY8|H Chain H, The Crystal Structure Of Dihydrolipoamide Dehydrogenase And
Dihydrolipoamide Dehydrogenase-Binding Protein (Didomain)
Subcomplex Of Human Pyruvate Dehydrogenase Complex.
pdb|1ZY8|I Chain I, The Crystal Structure Of Dihydrolipoamide Dehydrogenase And
Dihydrolipoamide Dehydrogenase-Binding Protein (Didomain)
Subcomplex Of Human Pyruvate Dehydrogenase Complex.
pdb|1ZY8|J Chain J, The Crystal Structure Of Dihydrolipoamide Dehydrogenase And
Dihydrolipoamide Dehydrogenase-Binding Protein (Didomain)
Subcomplex Of Human Pyruvate Dehydrogenase Complex
Length = 474
Score = 345 bits (884), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 180/283 (63%), Positives = 213/283 (75%), Gaps = 22/283 (7%)
Query: 811 YHLA-TKLFTQAGDK--GVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKIT 867
YH+A K F G + V+LNL+ MM KS AVKALTGGIAHLFK NKV +NG+GKIT
Sbjct: 63 YHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKIT 122
Query: 868 GPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVSSTGALSLKK------ 921
G N VT K+DG T+ + TKNILIATGSEVTPFPGI +DE+TIVSSTGALSLKK
Sbjct: 123 GKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMV 182
Query: 922 -----------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTK 970
GSVW RLGA+VTA+EF+ +GG+GID E++K FQRIL KQG +FKL TK
Sbjct: 183 VIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTK 242
Query: 971 VTGASKSGDN-ITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGR 1029
VTGA+K D I V+IE K E ++CD LLVC+GRRP+T NLGLEE+GIE D +GR
Sbjct: 243 VTGATKKSDGKIDVSIEAASG-GKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGR 301
Query: 1030 VPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAG 1072
+PVN+RFQT IPNI+AIGD + GPMLAHKAEDEGI+CVEG+AG
Sbjct: 302 IPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAG 344
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 62/78 (79%), Positives = 70/78 (89%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
GIEYKVGKFPFAANSRAKTN DTDG VK+LG K TD+VLG HI+GP AGE++NEA LA+E
Sbjct: 378 GIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALE 437
Query: 512 YGASCEDVARTCHAHPTV 529
YGASCED+AR CHAHPT+
Sbjct: 438 YGASCEDIARVCHAHPTL 455
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 68/79 (86%)
Query: 528 TVCVEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGT 587
TVC+EKN+TLGGTCLNVGCIPSKALLNNSHYYHMAH D +RGIE+ V+LNL+ MM
Sbjct: 32 TVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQ 91
Query: 588 KSAAVKALTGGIAHLFKSN 606
KS AVKALTGGIAHLFK N
Sbjct: 92 KSTAVKALTGGIAHLFKQN 110
>pdb|1ZMC|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMD|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|2F5Z|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|I Chain I, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|J Chain J, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
Length = 474
Score = 345 bits (884), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 174/265 (65%), Positives = 205/265 (77%), Gaps = 19/265 (7%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVK 885
V+LNL+ MM KS AVKALTGGIAHLFK NKV +NG+GKITG N VT K+DG T+ +
Sbjct: 81 VRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVID 140
Query: 886 TKNILIATGSEVTPFPGIEVDEETIVSSTGALSLKK-----------------GSVWGRL 928
TKNILIATGSEVTPFPGI +DE+TIVSSTGALSLKK GSVW RL
Sbjct: 141 TKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRL 200
Query: 929 GAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDN-ITVTIEN 987
GA+VTA+EF+ +GG+GID E++K FQRIL KQG +FKL TKVTGA+K D I V+IE
Sbjct: 201 GADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEA 260
Query: 988 VKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIG 1047
K E ++CD LLVC+GRRP+T NLGLEE+GIE D +GR+PVN+RFQT IPNI+AIG
Sbjct: 261 ASG-GKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIG 319
Query: 1048 DCIHGPMLAHKAEDEGIVCVEGIAG 1072
D + GPMLAHKAEDEGI+CVEG+AG
Sbjct: 320 DVVAGPMLAHKAEDEGIICVEGMAG 344
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 62/78 (79%), Positives = 70/78 (89%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
GIEYKVGKFPFAANSRAKTN DTDG VK+LG K TD+VLG HI+GP AGE++NEA LA+E
Sbjct: 378 GIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALE 437
Query: 512 YGASCEDVARTCHAHPTV 529
YGASCED+AR CHAHPT+
Sbjct: 438 YGASCEDIARVCHAHPTL 455
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 68/79 (86%)
Query: 528 TVCVEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGT 587
TVC+EKN+TLGGTCLNVGCIPSKALLNNSHYYHMAH D +RGIE+ V+LNL+ MM
Sbjct: 32 TVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLDKMMEQ 91
Query: 588 KSAAVKALTGGIAHLFKSN 606
KS AVKALTGGIAHLFK N
Sbjct: 92 KSTAVKALTGGIAHLFKQN 110
>pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase From
Pisum Sativum
pdb|1DXL|B Chain B, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase From
Pisum Sativum
pdb|1DXL|C Chain C, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase From
Pisum Sativum
pdb|1DXL|D Chain D, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase From
Pisum Sativum
Length = 470
Score = 237 bits (604), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 176/284 (61%), Gaps = 27/284 (9%)
Query: 811 YHLATKLFTQAGDK--GVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITG 868
YH A F G K V+++L MMG K AV LT GI LFK NKVT + G+GK
Sbjct: 63 YHEAKHSFANHGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVS 122
Query: 869 PNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVSSTGALSLKK------- 921
P+ ++V +G VK K+I+IATGS+V PG+ +DE+ IVSSTGAL+L +
Sbjct: 123 PSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKIVSSTGALALSEIPKKLVV 182
Query: 922 ----------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKV 971
GSVWGR+G+EVT +EF + I +D E+ KQFQR L KQGM+FKL TKV
Sbjct: 183 IGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT-MDAEIRKQFQRSLEKQGMKFKLKTKV 241
Query: 972 TGASKSGDNITVTIENVKDPTKKEE---LSCDALLVCVGRRPYTHNLGLEEIGIEKDEKG 1028
G SGD + +T+E P+ E + D +LV GR P+T L L++IG+E D+ G
Sbjct: 242 VGVDTSGDGVKLTVE----PSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLG 297
Query: 1029 RVPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAG 1072
R+ VN RF T + ++AIGD I GPMLAHKAE++G+ CVE +AG
Sbjct: 298 RILVNERFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAG 341
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 65/78 (83%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
G+EY+VGKFPF ANSRAK ++ +G VK++ +K TDK+LGVHI+ P AGELI+EA +A++
Sbjct: 375 GVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQ 434
Query: 512 YGASCEDVARTCHAHPTV 529
Y AS ED+AR CHAHPT+
Sbjct: 435 YDASSEDIARVCHAHPTM 452
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Query: 528 TVCVEKNDTLGGTCLNVGCIPSKALLNNSHYYHMA-HSGDMKARGIEVEGVKLNLETMMG 586
T C+EK LGGTCLNVGCIPSKALL++SH YH A HS G++V V+++L MMG
Sbjct: 32 TTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHS--FANHGVKVSNVEIDLAAMMG 89
Query: 587 TKSAAVKALTGGIAHLFKSN 606
K AV LT GI LFK N
Sbjct: 90 QKDKAVSNLTRGIEGLFKKN 109
>pdb|1JEH|A Chain A, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1JEH|B Chain B, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1V59|A Chain A, Crystal Structure Of Yeast Lipoamide Dehydrogenase Complexed
With Nad+
pdb|1V59|B Chain B, Crystal Structure Of Yeast Lipoamide Dehydrogenase Complexed
With Nad+
Length = 478
Score = 229 bits (584), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 176/294 (59%), Gaps = 33/294 (11%)
Query: 806 AVQANYHLATKLFTQAGDKGV------KLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQ 859
A+ N HL ++ T+A +G+ K+N+ K AVK LTGGI LFK NKVT
Sbjct: 54 ALLNNSHLFHQMHTEAQKRGIDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTY 113
Query: 860 LNGHGKITGPNTVTVIKSDGSTEEVK------TKNILIATGSEVTPFPGIEVDEETIVSS 913
G+G + V DG VK KNI++ATGSEVTPFPGIE+DEE IVSS
Sbjct: 114 YKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFPGIEIDEEKIVSS 173
Query: 914 TGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQR 956
TGALSLK+ GSV+ RLG++VT +EF IG +DGEVAK Q+
Sbjct: 174 TGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA-SMDGEVAKATQK 232
Query: 957 ILGKQGMQFKLGTKVTGASKSGDN--ITVTIENVKDPTKKEELSCDALLVCVGRRPYTHN 1014
L KQG+ FKL TKV A ++ D + + +E+ K K+E L + LLV VGRRPY
Sbjct: 233 FLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKT-NKQENLEAEVLLVAVGRRPYIAG 291
Query: 1015 LGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVE 1068
LG E+IG+E D++GR+ ++ +F + P+I +GD GPMLAHKAE+EGI VE
Sbjct: 292 LGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVE 345
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
GI+YK+GKFPFAANSRAKTN DT+GFVK+L D T+++LG HIIGP AGE+I EA LA+E
Sbjct: 383 GIDYKIGKFPFAANSRAKTNQDTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALE 442
Query: 512 YGASCEDVARTCHAHPTV 529
YGAS EDVAR CHAHPT+
Sbjct: 443 YGASAEDVARVCHAHPTL 460
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 528 TVCVEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEG-VKLNLETMMG 586
T CVEK LGGTCLNVGCIPSKALLNNSH +H H+ + + RGI+V G +K+N+
Sbjct: 31 TACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHT-EAQKRGIDVNGDIKINVANFQK 89
Query: 587 TKSAAVKALTGGIAHLFKSN 606
K AVK LTGGI LFK N
Sbjct: 90 AKDDAVKQLTGGIELLFKKN 109
>pdb|3URH|A Chain A, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3URH|B Chain B, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 491
Score = 229 bits (584), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 165/265 (62%), Gaps = 21/265 (7%)
Query: 827 KLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKT 886
KLNL+ K A VK+ G++ LFK NK+ G GK+ G V+V G + ++
Sbjct: 100 KLNLQKXXAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEA 159
Query: 887 KNILIATGSEVTPFPGIEV--DEETIVSSTGALSLKK-----------------GSVWGR 927
KN++IATGS+V PG+EV DE+TIVSSTGAL+L+K GSVW R
Sbjct: 160 KNVVIATGSDVAGIPGVEVAFDEKTIVSSTGALALEKVPASXIVVGGGVIGLELGSVWAR 219
Query: 928 LGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIEN 987
LGA+VT +EF++ I G G DGEVAKQ QR L KQG+ FKLG KVTGA KSGD VT E
Sbjct: 220 LGAKVTVVEFLDTILG-GXDGEVAKQLQRXLTKQGIDFKLGAKVTGAVKSGDGAKVTFEP 278
Query: 988 VKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIG 1047
VK + L + +L+ GR+P T LGL + G+ D +GRV ++ FQT I ++AIG
Sbjct: 279 VKG-GEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIG 337
Query: 1048 DCIHGPMLAHKAEDEGIVCVEGIAG 1072
D + GP LAHKAEDEG+ E IAG
Sbjct: 338 DVVRGPXLAHKAEDEGVAVAEIIAG 362
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 57/77 (74%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
G+ YK+GKFPF AN RA+ TDGFVK+L DK TD+VLG HIIG AGE I+E + E
Sbjct: 396 GVAYKIGKFPFTANGRARAXLQTDGFVKILADKETDRVLGGHIIGFGAGEXIHEIAVLXE 455
Query: 512 YGASCEDVARTCHAHPT 528
+G S ED+ RTCHAHPT
Sbjct: 456 FGGSSEDLGRTCHAHPT 472
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 530 CVEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGTKS 589
VEK T GGTCLNVGCIPSKALL+ S +H A G ++A G+EV KLNL+ K
Sbjct: 53 VVEKRSTYGGTCLNVGCIPSKALLHASEXFHQAQHG-LEALGVEVANPKLNLQKXXAHKD 111
Query: 590 AAVKALTGGIAHLFKSN 606
A VK+ G++ LFK N
Sbjct: 112 ATVKSNVDGVSFLFKKN 128
>pdb|2QAE|A Chain A, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
pdb|2QAE|B Chain B, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
Length = 468
Score = 202 bits (515), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 167/284 (58%), Gaps = 25/284 (8%)
Query: 811 YHLATKLFTQ---AGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKIT 867
YH A F + G +GV ++ M K AVK LTGG+ +LFK NKVT G G
Sbjct: 59 YHDAHANFARYGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFE 118
Query: 868 GPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVSSTGALSLKK------ 921
+++ V DG E ++TK +IATGSE T P + DE+ ++SSTGAL+L +
Sbjct: 119 TAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVPKTMV 178
Query: 922 -----------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGK-QGMQFKLGT 969
GSVW RLGAEVT +EF +D +V L K + M+F T
Sbjct: 179 VIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-LDEDVTNALVGALAKNEKMKFMTST 237
Query: 970 KVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGR 1029
KV G + +GD++++ +E K+E ++C+ALLV VGRRP+T LGL++I + K+E+G
Sbjct: 238 KVVGGTNNGDSVSLEVEGKNG--KRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGF 295
Query: 1030 VPVNSRFQTVIPNIFAIGDCI-HGPMLAHKAEDEGIVCVEGIAG 1072
V + F+T IP+++AIGD + GPMLAHKAEDEG+ C E +AG
Sbjct: 296 VKIGDHFETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAG 339
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 63/78 (80%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
G+ YKVGKFPF ANSRAK + DGFVKVL DK TD++LGVHI+ AGELI EA LAME
Sbjct: 373 GVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAME 432
Query: 512 YGASCEDVARTCHAHPTV 529
YGAS EDV RTCHAHPT+
Sbjct: 433 YGASSEDVGRTCHAHPTM 450
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 52/79 (65%)
Query: 528 TVCVEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGT 587
T CVEK LGGTCLNVGCIPSKALL+ +H YH AH+ + + EGV ++ M
Sbjct: 28 TACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDSAKMQQQ 87
Query: 588 KSAAVKALTGGIAHLFKSN 606
K AVK LTGG+ +LFK N
Sbjct: 88 KERAVKGLTGGVEYLFKKN 106
>pdb|3LAD|A Chain A, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
pdb|3LAD|B Chain B, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
Length = 476
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/266 (40%), Positives = 154/266 (57%), Gaps = 21/266 (7%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVK 885
V +++ TM+ K V+ LTGG+A L K+N VT GHGK+ V V +DGS++ +
Sbjct: 83 VAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLD 142
Query: 886 TKNILIATGSEVTPFPGIEVDEETIVSSTGAL-----------------SLKKGSVWGRL 928
T+N+++A+GS+ P VD++ IV STGAL L+ GSVW RL
Sbjct: 143 TENVILASGSKPVEIPPAPVDQDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWARL 202
Query: 929 GAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENV 988
GAEVT +E M+ +D +VAK+ Q+IL KQG++ LG +VTG +TV
Sbjct: 203 GAEVTVLEAMDKF-LPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTV---KF 258
Query: 989 KDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGD 1048
D ++ + D L+V VGRRP T +L + G+ DE+G + V+ T +P ++AIGD
Sbjct: 259 VDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIGD 318
Query: 1049 CIHGPMLAHKAEDEGIVCVEGIAGDK 1074
+ G MLAHKA +EG+V E IAG K
Sbjct: 319 VVRGAMLAHKASEEGVVVAERIAGHK 344
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 54/79 (68%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
G+ VG FPFAA+ RA NDT GFVKV+ D TD+VLGVH+IGP+A EL+ + +AME
Sbjct: 376 GVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAME 435
Query: 512 YGASCEDVARTCHAHPTVC 530
+G S ED+ AHP +
Sbjct: 436 FGTSAEDLGMMVFAHPALS 454
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 532 EKNDTLGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGTKSAA 591
E LGGTCLNVGCIPSKALL++S+ +H AH K GI V +++ TM+ K
Sbjct: 39 EGKTALGGTCLNVGCIPSKALLDSSYKFHEAHE-SFKLHGISTGEVAIDVPTMIARKDQI 97
Query: 592 VKALTGGIAHLFKSN 606
V+ LTGG+A L K+N
Sbjct: 98 VRNLTGGVASLIKAN 112
>pdb|1LPF|A Chain A, Three-Dimensional Structure Of Lipoamide Dehydrogenase From
Pseudomonas Fluorescens At 2.8 Angstroms Resolution.
Analysis Of Redox And Thermostability Properties
pdb|1LPF|B Chain B, Three-Dimensional Structure Of Lipoamide Dehydrogenase From
Pseudomonas Fluorescens At 2.8 Angstroms Resolution.
Analysis Of Redox And Thermostability Properties
Length = 477
Score = 183 bits (464), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 161/287 (56%), Gaps = 31/287 (10%)
Query: 811 YHLATKLFTQAG--DKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITG 868
YH A + F G KGV +++ M+ K+ VK LTGGIA LFK+N VT GHGK+
Sbjct: 66 YHEAKEAFKVHGIEAKGVTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEGHGKLLA 125
Query: 869 PNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVSSTGAL----------- 917
V V DG T+ ++ +N++IA+GS P + ++ IV STGAL
Sbjct: 126 NKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLSDDIIVDSTGALEFQAVPKKLGV 185
Query: 918 ------SLKKGSVWGRLGAEVTAIE----FMNAIGGMGIDGEVAKQFQRILGKQGMQFKL 967
L+ GSVW RLGAEVT +E F+ A D ++AK+ ++L KQG+ +L
Sbjct: 186 IGAGVIGLELGSVWARLGAEVTVLEALDKFLPA-----ADEQIAKEALKVLTKQGLNIRL 240
Query: 968 GTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEK 1027
G +VT + +TVT D +++ + D L+V VGRRP T +L + G+ DE+
Sbjct: 241 GARVTASEVKKKQVTVTF---TDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDER 297
Query: 1028 GRVPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAGDK 1074
G + V+ +T +P +FAIGD + G MLAHKA +EG++ E IAG K
Sbjct: 298 GFIYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHK 344
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 64/112 (57%), Gaps = 14/112 (12%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
G+E VG FPFAA+ RA NDT G VKV+ D TD+VLGVH+IGP+A EL+ + + ME
Sbjct: 376 GVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVIGPSAAELVQQGAIGME 435
Query: 512 YGASCEDVARTCHAHPTVCVEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAH 563
+G S ED+ +HPT+ ++ AL N H H+A+
Sbjct: 436 FGTSAEDLGMMVFSHPTLSEALHEA--------------ALAVNGHAIHIAN 473
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 528 TVCVEK------NDTLGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNL 581
T C+EK LGGTCLNVGCIPSKALL++S+ YH A K GIE +GV +++
Sbjct: 29 TACIEKYIGKEGKVALGGTCLNVGCIPSKALLDSSYKYHEAKEA-FKVHGIEAKGVTIDV 87
Query: 582 ETMMGTKSAAVKALTGGIAHLFKSN 606
M+ K+ VK LTGGIA LFK+N
Sbjct: 88 PAMVARKANIVKNLTGGIATLFKAN 112
>pdb|2EQ7|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2EQ7|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2YQU|A Chain A, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
pdb|2YQU|B Chain B, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
Length = 455
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 147/272 (54%), Gaps = 27/272 (9%)
Query: 814 ATKLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVT 873
A K A KGV+L+L +M K V+A T G+ LFK N + + G + V
Sbjct: 61 AKKGLLGAKVKGVELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVL 120
Query: 874 VIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVSSTGALS--------------- 918
V + + EE++ + ILIATGS P +VD E +V+ST ALS
Sbjct: 121 V---EETGEELEARYILIATGSAPLIPPWAQVDYERVVTSTEALSFPEVPKRLIVVGGGV 177
Query: 919 --LKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASK 976
L+ G VW RLGAEV +E+M+ I +D EV++ +R+ KQG+ + G +VT
Sbjct: 178 IGLELGVVWHRLGAEVIVLEYMDRILPT-MDLEVSRAAERVFKKQGLTIRTGVRVTAVVP 236
Query: 977 SGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRF 1036
V +E E L D +LV VGRRPYT L LE G+ DE+GR+PV+
Sbjct: 237 EAKGARVELEG------GEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHL 290
Query: 1037 QTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVE 1068
+T +P+I+AIGD + GPMLAHKA +EGI VE
Sbjct: 291 RTRVPHIYAIGDVVRGPMLAHKASEEGIAAVE 322
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 57/79 (72%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
GI YKVGKFP++A+ RA+ +T+GF+KVL TD++LGVH IG G+++ EA LA+
Sbjct: 360 GIPYKVGKFPYSASGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALF 419
Query: 512 YGASCEDVARTCHAHPTVC 530
+ AS ED+ R HAHP++
Sbjct: 420 FKASAEDLGRAPHAHPSLS 438
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 530 CVEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGTKS 589
VEK LGGTCL VGCIPSKALL + + A G + G +V+GV+L+L +M K
Sbjct: 29 VVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLL---GAKVKGVELDLPALMAHKD 85
Query: 590 AAVKALTGGIAHLFKSN 606
V+A T G+ LFK N
Sbjct: 86 KVVQANTQGVEFLFKKN 102
>pdb|2EQ6|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ6|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ8|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ9|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|G Chain G, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|H Chain H, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|J Chain J, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|K Chain K, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
Length = 464
Score = 142 bits (359), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 156/307 (50%), Gaps = 32/307 (10%)
Query: 789 ESDDQRQVVLNTLGNCAAVQANYHLATKL--FTQAGDKGVK----LNLETMMGTKSAAVK 842
E+ + V LN C +A H A L A G+K L+L+ + G + VK
Sbjct: 36 EAGEVGGVCLNV--GCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVVK 93
Query: 843 ALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPG 902
LTGG+ L K N V L G ++ GP V V E K++++ATGSE G
Sbjct: 94 KLTGGVGTLLKGNGVELLRGFARLVGPKEVEV-----GGERYGAKSLILATGSEPLELKG 148
Query: 903 IEVDEET-----------------IVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMG 945
E+ +V GA+ L+ G V+ RLGAEVT IE+M I G
Sbjct: 149 FPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQG 208
Query: 946 IDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVC 1005
D E A +R L K+G++ + TK G K D + V +E + + EE+ D +LV
Sbjct: 209 -DPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEG-GEGEEVVVDKVLVA 266
Query: 1006 VGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIV 1065
VGR+P T LGLE+ G++ DE+G + VN+R +T +P ++AIGD P+LAHKA EG++
Sbjct: 267 VGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLI 326
Query: 1066 CVEGIAG 1072
E AG
Sbjct: 327 AAENAAG 333
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 56/79 (70%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
G + KVGKFP AA+ RA T +G VKV+GD+ TD +LGV I+GP AGELI EA LA+E
Sbjct: 366 GYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALE 425
Query: 512 YGASCEDVARTCHAHPTVC 530
GA+ D+A T H HPT+
Sbjct: 426 MGATLTDLALTVHPHPTLS 444
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 528 TVCVEKNDTLGGTCLNVGCIPSKALLNNS---HYYHMAHSGDMKARGIEVEGVKLNLETM 584
+ VE + +GG CLNVGCIP+KALL+ + H+ +A +KA+ +L+L+ +
Sbjct: 32 VLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAK------PELDLKKL 84
Query: 585 MGTKSAAVKALTGGIAHLFKSN 606
G + VK LTGG+ L K N
Sbjct: 85 GGWRDQVVKKLTGGVGTLLKGN 106
>pdb|1EBD|A Chain A, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
pdb|1EBD|B Chain B, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
Length = 455
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 131/253 (51%), Gaps = 23/253 (9%)
Query: 837 KSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSE 896
K++ VK LTGG+ L K NKV + G NTV V+ D S + KN +IATGS
Sbjct: 86 KASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGD-SAQTYTFKNAIIATGSR 144
Query: 897 VTPFPGIEVDEETIVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMN 939
P + I+ STGAL+L + G+ + G +VT +E
Sbjct: 145 PIELPNFKFSNR-ILDSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG 203
Query: 940 AIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSC 999
I G + ++A ++ L K+G++ GA + D +TVT E TK +
Sbjct: 204 EILS-GFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYE-ANGETKT--IDA 259
Query: 1000 DALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLAHKA 1059
D +LV VGRRP T LGLE+IGI+ +G + V+ + +T +PNIFAIGD + GP LAHKA
Sbjct: 260 DYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPGPALAHKA 319
Query: 1060 EDEGIVCVEGIAG 1072
EG V E IAG
Sbjct: 320 SYEGKVAAEAIAG 332
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
GI+ KFPFAAN RA NDTDGF+K++ K ++G IIGP A ++I E LA+E
Sbjct: 366 GIDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIE 425
Query: 512 YGASCEDVARTCHAHPTV 529
G + ED+A T HAHPT+
Sbjct: 426 AGMTAEDIALTIHAHPTL 443
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 521 RTCHAHPTVCVEKNDTLGGTCLNVGCIPSKALLNNSHYYHMA-HSGDMKARGIEVEGVKL 579
R V + + LGG CLNVGCIPSKAL++ SH Y A HS +M GI+ E V +
Sbjct: 21 RAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSEEM---GIKAENVTI 77
Query: 580 NLETMMGTKSAAVKALTGGIAHLFKSN 606
+ + K++ VK LTGG+ L K N
Sbjct: 78 DFAKVQEWKASVVKKLTGGVEGLLKGN 104
>pdb|1BHY|A Chain A, Low Temperature Middle Resolution Structure Of P64k From
Masc Data
Length = 482
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 142/306 (46%), Gaps = 44/306 (14%)
Query: 801 LGNCAAVQANYHLATKLFTQAGDKGVK-----LNLETMMGTKSAAVKALTGGIAHLFKSN 855
L N A + HLA G+K L+++ + K V LTGG+A + KS
Sbjct: 57 LHNAAVIDEVRHLAAN--------GIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKSR 108
Query: 856 KVTQLNGHGKITGPNTVTVIKSDGSTEE----------VKTKNILIATGSEVTPFPGIEV 905
KV + G G+ P+ + V + G E V KN +IA GS VT P I
Sbjct: 109 KVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPFIPE 168
Query: 906 DEETIVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDG 948
D I+ S+GAL+LK+ G+V+ LG+ + +E M+ + G D
Sbjct: 169 DPR-IIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM-QGADR 226
Query: 949 EVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGR 1008
++ K +Q+ + + TK D + VT E P KE DA+LV GR
Sbjct: 227 DLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAP--KEPQRYDAVLVAAGR 284
Query: 1009 RPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVE 1068
P + E+ G+ ++G + V+ + +T +P+I+AIGD + PMLAHKA EG V E
Sbjct: 285 APNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAE 344
Query: 1069 GIAGDK 1074
AG K
Sbjct: 345 NCAGHK 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 10/79 (12%)
Query: 531 VEKNDTLGGTCLNVGCIPSKALLNNS----HYYHMAHSGDMKARGIEVEGVKLNLETMMG 586
VE+ TLGG CLNVGCIPSKALL+N+ H+A A GI+ +L+++ +
Sbjct: 35 VERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLA------ANGIKYPEPELDIDMLRA 88
Query: 587 TKSAAVKALTGGIAHLFKS 605
K V LTGG+A + KS
Sbjct: 89 YKDGVVSRLTGGLAGMAKS 107
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 460 FPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDV 519
FP+AA+ RA N F K++ D T +++G I+GP G++I E LA+E G D+
Sbjct: 390 FPWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVYLAIEMGCDAADI 449
Query: 520 ARTCHAHPTV 529
+T H HPT+
Sbjct: 450 GKTIHPHPTL 459
>pdb|1OJT|A Chain A, Structure Of Dihydrolipoamide Dehydrogenase
Length = 482
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 142/306 (46%), Gaps = 44/306 (14%)
Query: 801 LGNCAAVQANYHLATKLFTQAGDKGVK-----LNLETMMGTKSAAVKALTGGIAHLFKSN 855
L N A + HLA G+K L+++ + K V LTGG+A + KS
Sbjct: 57 LHNAAVIDEVRHLAAN--------GIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKSR 108
Query: 856 KVTQLNGHGKITGPNTVTVIKSDGSTEE----------VKTKNILIATGSEVTPFPGIEV 905
KV + G G+ P+ + V + G E V KN +IA GS VT P I
Sbjct: 109 KVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPFIPE 168
Query: 906 DEETIVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDG 948
D I+ S+GAL+LK+ G+V+ LG+ + +E M+ + G D
Sbjct: 169 DPR-IIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM-QGADR 226
Query: 949 EVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGR 1008
++ K +Q+ + + TK D + VT E P KE DA+LV GR
Sbjct: 227 DLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAP--KEPQRYDAVLVAAGR 284
Query: 1009 RPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVE 1068
P + E+ G+ ++G + V+ + +T +P+I+AIGD + PMLAHKA EG V E
Sbjct: 285 APNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAE 344
Query: 1069 GIAGDK 1074
AG K
Sbjct: 345 NCAGHK 350
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 531 VEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGTKSA 590
VE+ TLGG CLNVGCIPSKALL+N+ + A GI+ +L+++ + K
Sbjct: 35 VERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRH--LAANGIKYPEPELDIDMLRAYKDG 92
Query: 591 AVKALTGGIAHLFKS 605
V LTGG+A + KS
Sbjct: 93 VVSRLTGGLAGMAKS 107
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 460 FPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDV 519
FP+AA+ RA N F K++ D T +++G I+GP G++I E LA+E G D+
Sbjct: 390 FPWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADI 449
Query: 520 ARTCHAHPTV 529
+T H HPT+
Sbjct: 450 GKTIHPHPTL 459
>pdb|3II4|A Chain A, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound To
A Triazaspirodimethoxybenzoyl Inhibitor
pdb|3II4|B Chain B, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound To
A Triazaspirodimethoxybenzoyl Inhibitor
Length = 466
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 122/243 (50%), Gaps = 22/243 (9%)
Query: 847 GIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVD 906
G+ L K NK+T+++G+G NT+ V +DG TE V N +IATGS PG +
Sbjct: 98 GVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLS 157
Query: 907 ------EETIVS----------STGALSLKKGSVWGRLGAEVTAIEFM-NAIGGMGIDGE 949
EE I+S GA+ ++ G V G +VT +EF+ A+ D +
Sbjct: 158 ANVVTYEEQILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNE--DAD 215
Query: 950 VAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRR 1009
V+K+ ++ K G+ TKV + G +TVT+ KD +EL + +L +G
Sbjct: 216 VSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTV--TKDGV-AQELKAEKVLQAIGFA 272
Query: 1010 PYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEG 1069
P GL++ G+ ++ + V+ +T + +I+AIGD LAH AE +G+V E
Sbjct: 273 PNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAET 332
Query: 1070 IAG 1072
IAG
Sbjct: 333 IAG 335
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
G + V KFPF AN++A D GFVK++ D ++LG H++G EL+ E LA
Sbjct: 371 GYDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQR 430
Query: 512 YGASCEDVARTCHAHPTV 529
+ + ++AR H HPT+
Sbjct: 431 WDLTASELARNVHTHPTM 448
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 538 GGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVE 575
GG CLNVGCIPSKALL N+ H+ + D KA GI E
Sbjct: 40 GGVCLNVGCIPSKALLRNAELVHI-FTKDAKAFGISGE 76
>pdb|2A8X|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2A8X|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
Length = 464
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 22/243 (9%)
Query: 847 GIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVD 906
G+ L K NK+T+++G+G NT+ V +DG TE V N +IATGS PG +
Sbjct: 96 GVHFLXKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLS 155
Query: 907 EETIVSSTGALS--LKK--------------GSVWGRLGAEVTAIEFM-NAIGGMGIDGE 949
+ LS L K G V G +VT +EF+ A+ D +
Sbjct: 156 ANVVTYEEQILSRELPKSIIIAGAGAIGXEFGYVLKNYGVDVTIVEFLPRALPNE--DAD 213
Query: 950 VAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRR 1009
V+K+ ++ K G+ TKV + G +TVT+ KD +EL + +L +G
Sbjct: 214 VSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTV--TKDGV-AQELKAEKVLQAIGFA 270
Query: 1010 PYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEG 1069
P GL++ G+ ++ + V+ +T + +I+AIGD LAH AE +G+V E
Sbjct: 271 PNVEGYGLDKAGVALTDRKAIGVDDYXRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAET 330
Query: 1070 IAG 1072
IAG
Sbjct: 331 IAG 333
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
G + V KFPF AN++A D GFVK++ D ++LG H++G EL+ E LA
Sbjct: 369 GYDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQR 428
Query: 512 YGASCEDVARTCHAHPT 528
+ + ++AR H HPT
Sbjct: 429 WDLTASELARNVHTHPT 445
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 538 GGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVE 575
GG CLNVGCIPSKALL N+ H+ + D KA GI E
Sbjct: 38 GGVCLNVGCIPSKALLRNAELVHI-FTKDAKAFGISGE 74
>pdb|1LVL|A Chain A, The Refined Structure Of Pseudomonas Putida Lipoamide
Dehydrogenase Complexed With Nad+ At 2.45 Angstroms
Resolution
Length = 458
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 131/287 (45%), Gaps = 35/287 (12%)
Query: 807 VQANYHLATKLFTQAGDKGV-----KLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLN 861
V +H A++ FT+ G+ +L++ + K V LT G+A L K + V ++
Sbjct: 57 VAEQFHQASR-FTEPSPLGISVASPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVH 115
Query: 862 GHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEV---------------- 905
G K+ V V DG + ++ +++L+ATGS P + +
Sbjct: 116 GWAKVLDGKQVEV---DG--QRIQCEHLLLATGSSSVELPMLPLGGPVISSTEALAPKAL 170
Query: 906 DEETIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQF 965
+ +V G + L+ G + +LGA+V+ +E I D E+ L K G+
Sbjct: 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT-YDSELTAPVAESLKKLGIAL 229
Query: 966 KLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKD 1025
LG V G +N + + K + L D +LV VGRRP T LE + + K
Sbjct: 230 HLGHSVEGY----ENGCLLANDGKG--GQLRLEADRVLVAVGRRPRTKGFNLECLDL-KM 282
Query: 1026 EKGRVPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAG 1072
+ ++ R QT + N++AIGD PMLAH+A +G + E IAG
Sbjct: 283 NGAAIAIDERCQTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAEIIAG 329
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
G++ V +FPFAAN RA + GFV+V+ + +LG +G A EL ++E
Sbjct: 363 GLDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLE 422
Query: 512 YGASCEDVARTCHAHPTV 529
GA EDVA T HAHPT+
Sbjct: 423 MGACLEDVAGTIHAHPTL 440
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 527 PTVCVEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAHS-GDMKARGIEVEGVKLNLETMM 585
PTV VE LGGTCLN+GCIPSKAL++ + +H A + GI V +L++ +
Sbjct: 30 PTVLVE-GQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLDIGQSV 88
Query: 586 GTKSAAVKALTGGIAHLFKSN 606
K V LT G+A L K +
Sbjct: 89 AWKDGIVDRLTTGVAALLKKH 109
>pdb|3EAN|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAO|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
Length = 499
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 112/250 (44%), Gaps = 24/250 (9%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVK 885
VK + E M + + +L G + KV N +GK GP+ + + G +
Sbjct: 94 VKHDWEKMTESVQNHIGSLNWGYRVALREKKVVYENAYGKFIGPHKIMATNNKGKEKVYS 153
Query: 886 TKNILIATGSEVTPFPGIEVDEETIVSSTGALSLKKGSVWGR---LGAEVTAIEFMNAIG 942
+ LIATG E + GI D+E +SS SL G+ +GA A+E +
Sbjct: 154 AERFLIATG-ERPRYLGIPGDKEYCISSDDLFSLPYCP--GKTLVVGASYVALECAGFLA 210
Query: 943 GMGIDGEVAKQFQRILG-KQGMQFKLGTKVT--GASKSGDNITVTIENVK---------- 989
G+G+D V + + G Q M K+G + G + IE ++
Sbjct: 211 GIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPTKIEQIEAGTPGRLKVT 270
Query: 990 -DPTKKEELSCD---ALLVCVGRRPYTHNLGLEEIGIEKDEK-GRVPVNSRFQTVIPNIF 1044
T EE D +L+ VGR T +GLE +G++ +EK G++PV QT +P I+
Sbjct: 271 AKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIY 330
Query: 1045 AIGDCIHGPM 1054
AIGD + G +
Sbjct: 331 AIGDILEGKL 340
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 460 FPFAANSRAKTNNDTDGFVKVLGD-KLTDKVLGVHIIGPAAGELINEAVLAMEYGASCED 518
+P ++ NN + KV+ + K ++V+G H++GP AGE+ A++ G + +
Sbjct: 407 WPLEWTVPSRDNNKC--YAKVICNLKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQ 464
Query: 519 VARTCHAHPTVCVEKNDTL------GGTCLNVGC 546
+ T HP VC E TL GG L GC
Sbjct: 465 LDSTIGIHP-VCAEIFTTLSVTKRSGGDILQSGC 497
Score = 33.1 bits (74), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 14/16 (87%)
Query: 537 LGGTCLNVGCIPSKAL 552
LGGTC+NVGCIP K +
Sbjct: 55 LGGTCVNVGCIPKKLM 70
>pdb|1H6V|A Chain A, Mammalian Thioredoxin Reductase
pdb|1H6V|B Chain B, Mammalian Thioredoxin Reductase
pdb|1H6V|C Chain C, Mammalian Thioredoxin Reductase
pdb|1H6V|D Chain D, Mammalian Thioredoxin Reductase
pdb|1H6V|E Chain E, Mammalian Thioredoxin Reductase
pdb|1H6V|F Chain F, Mammalian Thioredoxin Reductase
Length = 499
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 112/250 (44%), Gaps = 24/250 (9%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVK 885
VK + E M + + +L G + KV N +GK GP+ + + G +
Sbjct: 94 VKHDWEKMTESVQNHIGSLNWGYRVALREKKVVYENAYGKFIGPHKIMATNNKGKEKVYS 153
Query: 886 TKNILIATGSEVTPFPGIEVDEETIVSSTGALSLKKGSVWGR---LGAEVTAIEFMNAIG 942
+ LIATG E + GI D+E +SS SL G+ +GA A+E +
Sbjct: 154 AERFLIATG-ERPRYLGIPGDKEYCISSDDLFSLPYCP--GKTLVVGASYVALECAGFLA 210
Query: 943 GMGIDGEVAKQFQRILG-KQGMQFKLGTKVT--GASKSGDNITVTIENVK---------- 989
G+G+D V + + G Q M K+G + G + IE ++
Sbjct: 211 GIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPTKIEQIEAGTPGRLKVT 270
Query: 990 -DPTKKEELSCD---ALLVCVGRRPYTHNLGLEEIGIEKDEK-GRVPVNSRFQTVIPNIF 1044
T EE D +L+ VGR T +GLE +G++ +EK G++PV QT +P I+
Sbjct: 271 AKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIY 330
Query: 1045 AIGDCIHGPM 1054
AIGD + G +
Sbjct: 331 AIGDILEGKL 340
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 460 FPFAANSRAKTNNDTDGFVKVLGD-KLTDKVLGVHIIGPAAGELINEAVLAMEYGASCED 518
+P ++ NN + KV+ + K ++V+G H++GP AGE+ A++ G + +
Sbjct: 407 WPLEWTVPSRDNNKC--YAKVICNLKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQ 464
Query: 519 VARTCHAHPTVCVEKNDTL------GGTCLNVGC 546
+ T HP VC E TL GG L GC
Sbjct: 465 LDSTIGIHP-VCAEIFTTLSVTKRSGGDILQSGC 497
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 534 NDTLGGTCLNVGCIPSKAL 552
N LGGTC+NVGCIP K +
Sbjct: 52 NWGLGGTCVNVGCIPKKLM 70
>pdb|1ONF|A Chain A, Crystal Structure Of Plasmodium Falciparum Glutathione
Reductase
Length = 500
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 108/248 (43%), Gaps = 25/248 (10%)
Query: 823 DKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVI------- 875
D NL ++ + ++ L +KV G N + +
Sbjct: 70 DTKFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNN 129
Query: 876 KSDGSTEE--VKTKNILIATGSEVTPFPGIEVDEETIVSSTGALSLKKGSVWGRLGAEVT 933
K +G E ++ +NILIA G++ FP ++ E TI SS ++K+ G +G+
Sbjct: 130 KDNGPLNEEILEGRNILIAVGNKPV-FPPVKGIENTI-SSDEFFNIKESKKIGIVGSGYI 187
Query: 934 AIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNI-----TVTIENV 988
A+E +N I +GID + + RIL K + K+ NI V I+ V
Sbjct: 188 AVELINVIKRLGIDSYIFARGNRILRKFDESV-INVLENDMKKNNINIVTFADVVEIKKV 246
Query: 989 KDPTKKEELS-------CDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIP 1041
D LS D ++ CVGR P T NL LE++ +E + + V+ +T +
Sbjct: 247 SDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETN-NNYIVVDENQRTSVN 305
Query: 1042 NIFAIGDC 1049
NI+A+GDC
Sbjct: 306 NIYAVGDC 313
Score = 37.4 bits (85), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 524 HAHPTVCVEKNDTLGGTCLNVGCIPSKALLN 554
H VEK+ LGGTC+NVGC+P K + N
Sbjct: 24 HNAKVALVEKS-RLGGTCVNVGCVPKKIMFN 53
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 491 GVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPTVCVE 532
G+HIIG A E++ +A++ A+ +D T HPT E
Sbjct: 450 GLHIIGLNADEIVQGFAVALKMNATKKDFDETIPIHPTAAEE 491
>pdb|2CFY|A Chain A, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|B Chain B, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|C Chain C, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|D Chain D, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|E Chain E, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|F Chain F, Crystal Structure Of Human Thioredoxin Reductase 1
Length = 521
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 24/246 (9%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVK 885
VK + + M+ + +L G + KV N +G+ GP+ + + G +
Sbjct: 116 VKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYS 175
Query: 886 TKNILIATGSEVTPFPGIEVDEETIVSSTGALSLKKGSVWGR---LGAEVTAIEFMNAIG 942
+ LIATG E + GI D+E +SS SL G+ +GA A+E +
Sbjct: 176 AERFLIATG-ERPRYLGIPGDKEYCISSDDLFSLPYCP--GKTLVVGASYVALECAGFLA 232
Query: 943 GMGIDGEVAKQFQRILG-KQGMQFKLGTKVT--GASKSGDNITVTIENVK---------- 989
G+G+D V + + G Q M K+G + G + + +E ++
Sbjct: 233 GIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVV 292
Query: 990 -DPTKKEEL---SCDALLVCVGRRPYTHNLGLEEIGIEKDEK-GRVPVNSRFQTVIPNIF 1044
T EE+ + +++ +GR T +GLE +G++ +EK G++PV QT +P I+
Sbjct: 293 AQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIY 352
Query: 1045 AIGDCI 1050
AIGD +
Sbjct: 353 AIGDIL 358
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 460 FPFAANSRAKTNNDTDGFVKVLGD-KLTDKVLGVHIIGPAAGELINEAVLAMEYGASCED 518
+P ++ NN + K++ + K ++V+G H++GP AGE+ A++ G + +
Sbjct: 429 WPLEWTIPSRDNNKC--YAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQ 486
Query: 519 VARTCHAHPTVCVEKNDTL------GGTCLNVGC 546
+ T HP VC E TL G + L GC
Sbjct: 487 LDSTIGIHP-VCAEVFTTLSVTKRSGASILQAGC 519
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 14/16 (87%)
Query: 537 LGGTCLNVGCIPSKAL 552
LGGTC+NVGCIP K +
Sbjct: 77 LGGTCVNVGCIPKKLM 92
>pdb|2ZZ0|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZB|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZC|A Chain A, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|B Chain B, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|C Chain C, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|D Chain D, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
Length = 513
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 24/246 (9%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVK 885
VK + + M+ + +L G + KV N +G+ GP+ + + G +
Sbjct: 108 VKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYS 167
Query: 886 TKNILIATGSEVTPFPGIEVDEETIVSSTGALSLKKGSVWGR---LGAEVTAIEFMNAIG 942
+ LIATG E + GI D+E +SS SL G+ +GA A+E +
Sbjct: 168 AERFLIATG-ERPRYLGIPGDKEYCISSDDLFSLPYCP--GKTLVVGASYVALECAGFLA 224
Query: 943 GMGIDGEVAKQFQRILG-KQGMQFKLGTKVT--GASKSGDNITVTIENVK---------- 989
G+G+D V + + G Q M K+G + G + + +E ++
Sbjct: 225 GIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVV 284
Query: 990 -DPTKKEEL---SCDALLVCVGRRPYTHNLGLEEIGIEKDEK-GRVPVNSRFQTVIPNIF 1044
T EE+ + +++ +GR T +GLE +G++ +EK G++PV QT +P I+
Sbjct: 285 AQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIY 344
Query: 1045 AIGDCI 1050
AIGD +
Sbjct: 345 AIGDIL 350
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 460 FPFAANSRAKTNNDTDGFVKVLGD-KLTDKVLGVHIIGPAAGELINEAVLAMEYGASCED 518
+P ++ NN + K++ + K ++V+G H++GP AGE+ A++ G + +
Sbjct: 421 WPLEWTIPSRDNNKC--YAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQ 478
Query: 519 VARTCHAHPTVCVEKNDTL------GGTCLNVGC 546
+ T HP VC E TL G + L GC
Sbjct: 479 LDSTIGIHP-VCAEVFTTLSVTKRSGASILQAGC 511
Score = 33.1 bits (74), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 14/16 (87%)
Query: 537 LGGTCLNVGCIPSKAL 552
LGGTC+NVGCIP K +
Sbjct: 69 LGGTCVNVGCIPKKLM 84
>pdb|3QFA|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 519
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 24/246 (9%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVK 885
VK + + M+ + +L G + KV N +G+ GP+ + + G +
Sbjct: 114 VKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYS 173
Query: 886 TKNILIATGSEVTPFPGIEVDEETIVSSTGALSLKKGSVWGR---LGAEVTAIEFMNAIG 942
+ LIATG E + GI D+E +SS SL G+ +GA A+E +
Sbjct: 174 AERFLIATG-ERPRYLGIPGDKEYCISSDDLFSLPYCP--GKTLVVGASYVALECAGFLA 230
Query: 943 GMGIDGEVAKQFQRILG-KQGMQFKLGTKVT--GASKSGDNITVTIENVK---------- 989
G+G+D V + + G Q M K+G + G + + +E ++
Sbjct: 231 GIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVV 290
Query: 990 -DPTKKEEL---SCDALLVCVGRRPYTHNLGLEEIGIEKDEK-GRVPVNSRFQTVIPNIF 1044
T EE+ + +++ +GR T +GLE +G++ +EK G++PV QT +P I+
Sbjct: 291 AQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIY 350
Query: 1045 AIGDCI 1050
AIGD +
Sbjct: 351 AIGDIL 356
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 460 FPFAANSRAKTNNDTDGFVKVLGD-KLTDKVLGVHIIGPAAGELINEAVLAMEYGASCED 518
+P ++ NN + K++ + K ++V+G H++GP AGE+ A++ G + +
Sbjct: 427 WPLEWTIPSRDNNKC--YAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQ 484
Query: 519 VARTCHAHPTVCVEKNDTLGGT 540
+ T HP VC E TL T
Sbjct: 485 LDSTIGIHP-VCAEVFTTLSVT 505
Score = 33.1 bits (74), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 14/16 (87%)
Query: 537 LGGTCLNVGCIPSKAL 552
LGGTC+NVGCIP K +
Sbjct: 75 LGGTCVNVGCIPKKLM 90
>pdb|2J3N|A Chain A, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|B Chain B, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|C Chain C, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|D Chain D, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|E Chain E, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|F Chain F, X-Ray Structure Of Human Thioredoxin Reductase 1
Length = 519
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 24/246 (9%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVK 885
VK + + M+ + +L G + KV N +G+ GP+ + + G +
Sbjct: 114 VKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYS 173
Query: 886 TKNILIATGSEVTPFPGIEVDEETIVSSTGALSLKKGSVWGR---LGAEVTAIEFMNAIG 942
+ LIATG E + GI D+E +SS SL G+ +GA A+E +
Sbjct: 174 AERFLIATG-ERPRYLGIPGDKEYCISSDDLFSLPYCP--GKTLVVGASYVALECAGFLA 230
Query: 943 GMGIDGEVAKQFQRILG-KQGMQFKLGTKVT--GASKSGDNITVTIENVK---------- 989
G+G+D V + + G Q M K+G + G + + +E ++
Sbjct: 231 GIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVV 290
Query: 990 -DPTKKEEL---SCDALLVCVGRRPYTHNLGLEEIGIEKDEK-GRVPVNSRFQTVIPNIF 1044
T EE+ + +++ +GR T +GLE +G++ +EK G++PV QT +P I+
Sbjct: 291 AQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIY 350
Query: 1045 AIGDCI 1050
AIGD +
Sbjct: 351 AIGDIL 356
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 460 FPFAANSRAKTNNDTDGFVKVLGD-KLTDKVLGVHIIGPAAGELINEAVLAMEYGASCED 518
+P ++ NN + K++ + K ++V+G H++GP AGE+ A++ G + +
Sbjct: 427 WPLEWTIPSRDNNKC--YAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQ 484
Query: 519 VARTCHAHPTVCVEKNDTL------GGTCLNVGC 546
+ T HP VC E TL G + L GC
Sbjct: 485 LDSTIGIHP-VCAEVFTTLSVTKRSGASILQAGC 517
Score = 33.1 bits (74), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 14/16 (87%)
Query: 537 LGGTCLNVGCIPSKAL 552
LGGTC+NVGCIP K +
Sbjct: 75 LGGTCVNVGCIPKKLM 90
>pdb|2X50|A Chain A, Crystal Structure Of Trypanothione Reductase From Leishmania
Infantum In Complex With Nadph And Silver
pdb|2X50|B Chain B, Crystal Structure Of Trypanothione Reductase From Leishmania
Infantum In Complex With Nadph And Silver
Length = 510
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 29/269 (10%)
Query: 829 NLETMMGTKSAAVKALTGGIAHLFKSNKVTQLN-GHGKITGPNTVTVIKSDGS----TEE 883
N +T++ K+ V ++ +F + + G G + +TV V KS+ E
Sbjct: 111 NWKTLIAAKNKVVNSINESYKSMFADTEGLSFHMGFGALQDAHTVVVRKSEDPHSDVLET 170
Query: 884 VKTKNILIATGSEVTPFPGIEVDEETIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGG 943
+ T+ ILIATGS T G+ DE I S+ +G A+EF G
Sbjct: 171 LDTEYILIATGSWPTRL-GVPGDEFCITSNEAFYLEDAPKRMLCVGGGYIAVEFAGIFNG 229
Query: 944 M------------------GIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTI 985
G D EV K + LG G++ + T +K+ D
Sbjct: 230 YKPCGGYVDLCYRGDLILRGFDTEVRKSLTKQLGANGIRVRTNLNPTKITKNEDGSNHV- 288
Query: 986 ENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFA 1045
+ D T+++ D +++ +GR P + L L++ G+ + G V V++ +T + NI+A
Sbjct: 289 -HFNDGTEEDY---DQVMLAIGRVPRSQALQLDKAGVRTGKNGAVQVDAYSKTSVDNIYA 344
Query: 1046 IGDCIHGPMLAHKAEDEGIVCVEGIAGDK 1074
IGD + ML A +EG VE + G K
Sbjct: 345 IGDVTNRVMLTPVAINEGAAFVETVFGGK 373
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 537 LGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGTKSAAVKALT 596
LGGTC+NVGC+P K ++ + Y + ++ E + N +T++ K+ V ++
Sbjct: 68 LGGTCVNVGCVPKKLMVTGAQYMDLIRESGGFGWEMDRESLCPNWKTLIAAKNKVVNSIN 127
Query: 597 GGIAHLF 603
+F
Sbjct: 128 ESYKSMF 134
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 477 FVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPT 528
++++ ++ +VLGVH++G +A E+I + M+ GA D T HPT
Sbjct: 432 MIRIITNESNGEVLGVHMLGDSAPEIIQSVGICMKMGAKISDFHSTIGVHPT 483
>pdb|2JK6|A Chain A, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2JK6|B Chain B, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2W0H|A Chain A, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2W0H|B Chain B, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2YAU|A Chain A, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|2YAU|B Chain B, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|4ADW|A Chain A, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
pdb|4ADW|B Chain B, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
Length = 511
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 29/269 (10%)
Query: 829 NLETMMGTKSAAVKALTGGIAHLFKSNKVTQLN-GHGKITGPNTVTVIKSDGSTEEV--- 884
N +T++ K+ V ++ +F + + G G + +TV V KS+ +V
Sbjct: 111 NWKTLIAAKNKVVNSINESYKSMFADTEGLSFHMGFGALQDAHTVVVRKSEDPHSDVLET 170
Query: 885 -KTKNILIATGSEVTPFPGIEVDEETIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGG 943
T+ ILIATGS T G+ DE I S+ +G A+EF G
Sbjct: 171 LDTEYILIATGSWPTRL-GVPGDEFCITSNEAFYLEDAPKRMLCVGGGYIAVEFAGIFNG 229
Query: 944 M------------------GIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTI 985
G D EV K + LG G++ + T +K+ D
Sbjct: 230 YKPCGGYVDLCYRGDLILRGFDTEVRKSLTKQLGANGIRVRTNLNPTKITKNEDGSNHV- 288
Query: 986 ENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFA 1045
+ D T+++ D +++ +GR P + L L++ G+ + G V V++ +T + NI+A
Sbjct: 289 -HFNDGTEEDY---DQVMLAIGRVPRSQALQLDKAGVRTGKNGAVQVDAYSKTSVDNIYA 344
Query: 1046 IGDCIHGPMLAHKAEDEGIVCVEGIAGDK 1074
IGD + ML A +EG VE + G K
Sbjct: 345 IGDVTNRVMLTPVAINEGAAFVETVFGGK 373
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 537 LGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGTKSAAVKALT 596
LGGTC+NVGC+P K ++ + Y + ++ E + N +T++ K+ V ++
Sbjct: 68 LGGTCVNVGCVPKKLMVTGAQYMDLIRESGGFGWEMDRESLCPNWKTLIAAKNKVVNSIN 127
Query: 597 GGIAHLF 603
+F
Sbjct: 128 ESYKSMF 134
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 477 FVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPT 528
++++ ++ +VLGVH++G +A E+I + M+ GA D T HPT
Sbjct: 432 MIRIITNESNGEVLGVHMLGDSAPEIIQSVGICMKMGAKISDFHSTIGVHPT 483
>pdb|4B1B|A Chain A, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
pdb|4B1B|B Chain B, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
Length = 542
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 28/243 (11%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTV-IKSDGSTEEV 884
+K + + ++ T + +++L +S+KV +NG K+ NTV+ +K D S EE
Sbjct: 124 LKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEET 183
Query: 885 KT-KNILIATGSEVTPFPGIEVDEETIVSSTGALSLKKGSVWGR---LGAEVTAIE---F 937
T K ILIATG +E +E ++S SLKK G+ +GA A+E F
Sbjct: 184 VTGKYILIATGCRPHIPDDVEGAKELSITSDDIFSLKKDP--GKTLVVGASYVALECSGF 241
Query: 938 MNAIGG-----------MGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIE 986
+N++G G D + A + + + +QG+ FK G +K D I V
Sbjct: 242 LNSLGYDVTVAVRSIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFS 301
Query: 987 NVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQ-TVIPNIFA 1045
+ K EL D +L +GR+ L LE + + ++ + T IP+IFA
Sbjct: 302 D-----KTSELY-DTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFA 355
Query: 1046 IGD 1048
+GD
Sbjct: 356 VGD 358
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 27/82 (32%)
Query: 537 LGGTCLNVGCIPSKALLNNSHYYHMAHSG-----DMKARGIEVEGVK------------- 578
+GGTC+NVGC+P K + HY H G D KA G + + +K
Sbjct: 85 IGGTCVNVGCVPKKLM----HY--AGHMGSIFKLDSKAYGWKFDNLKHDWKKLVTTVQSH 138
Query: 579 ---LNLETMMGTKSAAVKALTG 597
LN M G +S+ VK + G
Sbjct: 139 IRSLNFSYMTGLRSSKVKYING 160
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 487 DKVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPT 528
++V+G H +GP AGE+ LA+ +D HPT
Sbjct: 471 NRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNCIGIHPT 512
>pdb|1GES|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GES|B Chain B, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 28/238 (11%)
Query: 827 KLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKT 886
K N ET++ +++A + + ++ N V + G + T+ V + E +
Sbjct: 78 KFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV-----NGETITA 132
Query: 887 KNILIATGSEVT--PFPGIE-------------VDEETIVSSTGALSLKKGSVWGRLGAE 931
+ILIATG + PG+E + E V G + ++ G V LGA+
Sbjct: 133 DHILIATGGRPSHPDIPGVEYGIDSDGFFALPALPERVAVVGAGYIGVELGGVINGLGAK 192
Query: 932 VTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGD-NITVTIENVKD 990
E +A D +++ ++ +G Q K+ D ++T+ +E+ +
Sbjct: 193 THLFEMFDA-PLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRS 251
Query: 991 PTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGD 1048
T D L+ +GR P N+ LE G++ +EKG + V+ T I I+A+GD
Sbjct: 252 ET------VDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGD 303
Score = 37.7 bits (86), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 537 LGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGTKSAAV 592
LGGTC+NVGC+P K + + + H G + K N ET++ +++A +
Sbjct: 38 LGGTCVNVGCVPKKVMWHAAQIREAIHMYG-PDYGFDTTINKFNWETLIASRTAYI 92
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 454 EYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYG 513
+ KV K F A A T + +K++ +K++G+H IG E++ +A++ G
Sbjct: 367 QVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMG 426
Query: 514 ASCEDVARTCHAHPTVCVE 532
A+ +D T HPT E
Sbjct: 427 ATKKDFDNTVAIHPTAAEE 445
>pdb|2V6O|A Chain A, Structure Of Schistosoma Mansoni Thioredoxin-Glutathione
Reductase (Smtgr)
Length = 596
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 30/261 (11%)
Query: 829 NLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKN 888
N TM+ + + +L G + N+VT LN G++ P+ V + + +
Sbjct: 193 NWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNK 252
Query: 889 ILIATGSEVTPFP--------GIEVDE---------ETIVSSTGALSLKKGSVWGRLGAE 931
I++ATG E +P GI D+ +T+V ++L+ LG +
Sbjct: 253 IILATG-ERPKYPEIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGD 311
Query: 932 VTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQF-KLGT-------KVTGASKSGDNITV 983
VT + + +I G D ++A++ + G++F KL KV + + +
Sbjct: 312 VTVM--VRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLL 369
Query: 984 TIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNI 1043
+ D K EE + ++ VGR P + E +G++ D+ GRV QT + N+
Sbjct: 370 VKGHYTDGKKFEE-EFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNV 428
Query: 1044 FAIGDCIHG-PMLAHKAEDEG 1063
+AIGD G P L A G
Sbjct: 429 YAIGDINAGKPQLTPVAIQAG 449
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 488 KVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPTVCVEKNDTL 537
+VLG+H++GP AGE+ +A++ GA+ D RT HPT C E TL
Sbjct: 533 RVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPT-CSETFTTL 581
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 537 LGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGTKSAAVKALT 596
LGGTC+NVGCIP K + H + ++ + N TM+ + + +L
Sbjct: 150 LGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLN 209
Query: 597 GGIAHLFKSN 606
G + N
Sbjct: 210 WGYKVALRDN 219
>pdb|2X8C|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8C|B Chain B, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8G|A Chain A, Oxidized Thioredoxin Glutathione Reductase From Schistosoma
Mansoni
pdb|2X8H|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Gsh
pdb|2X99|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Nadph
Length = 598
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 30/261 (11%)
Query: 829 NLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKN 888
N TM+ + + +L G + N+VT LN G++ P+ V + + +
Sbjct: 193 NWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNK 252
Query: 889 ILIATGSEVTPFP--------GIEVDE---------ETIVSSTGALSLKKGSVWGRLGAE 931
I++ATG E +P GI D+ +T+V ++L+ LG +
Sbjct: 253 IILATG-ERPKYPEIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGD 311
Query: 932 VTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQF-KLGT-------KVTGASKSGDNITV 983
VT + + +I G D ++A++ + G++F KL KV + + +
Sbjct: 312 VTVM--VRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLL 369
Query: 984 TIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNI 1043
+ D K EE + ++ VGR P + E +G++ D+ GRV QT + N+
Sbjct: 370 VKGHYTDGKKFEE-EFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNV 428
Query: 1044 FAIGDCIHG-PMLAHKAEDEG 1063
+AIGD G P L A G
Sbjct: 429 YAIGDINAGKPQLTPVAIQAG 449
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 488 KVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPTVCVEKNDTL 537
+VLG+H++GP AGE+ +A++ GA+ D RT HPT C E TL
Sbjct: 533 RVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPT-CSETFTTL 581
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 537 LGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGTKSAAVKALT 596
LGGTC+NVGCIP K + H + ++ + N TM+ + + +L
Sbjct: 150 LGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLN 209
Query: 597 GGIAHLFKSN 606
G + N
Sbjct: 210 WGYKVALRDN 219
>pdb|3H4K|A Chain A, Crystal Structure Of The Wild Type Thioredoxin Glutatione
Reductase From Schistosoma Mansoni In Complex With
Auranofin
Length = 598
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 30/261 (11%)
Query: 829 NLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKN 888
N TM+ + + +L G + N+VT LN G++ P+ V + + +
Sbjct: 193 NWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNK 252
Query: 889 ILIATGSEVTPFP--------GIEVDE---------ETIVSSTGALSLKKGSVWGRLGAE 931
I++ATG E +P GI D+ +T+V ++L+ LG +
Sbjct: 253 IILATG-ERPKYPEIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGD 311
Query: 932 VTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQF-KLGT-------KVTGASKSGDNITV 983
VT + + +I G D ++A++ + G++F KL KV + + +
Sbjct: 312 VTVM--VRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLL 369
Query: 984 TIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNI 1043
+ D K EE + ++ VGR P + E +G++ D+ GRV QT + N+
Sbjct: 370 VKGHYTDGKKFEE-EFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNV 428
Query: 1044 FAIGDCIHG-PMLAHKAEDEG 1063
+AIGD G P L A G
Sbjct: 429 YAIGDINAGKPQLTPVAIQAG 449
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 488 KVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPTVCVEKNDTL 537
+VLG+H++GP AGE+ +A++ GA+ D RT HPT C E TL
Sbjct: 533 RVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPT-CSETFTTL 581
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 537 LGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGTKSAAVKALT 596
LGGTC+NVGCIP K + H + ++ + N TM+ + + +L
Sbjct: 150 LGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLN 209
Query: 597 GGIAHLFKSN 606
G + N
Sbjct: 210 WGYKVALRDN 219
>pdb|1MO9|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MO9|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MOK|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|C Chain C, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|D Chain D, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|2C3D|A Chain A, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3D|B Chain B, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3C|A Chain A, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|2C3C|B Chain B, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|3Q6J|A Chain A, Structural Basis For Carbon Dioxide Binding By 2-Ketopropyl
Coenzyme M OxidoreductaseCARBOXYLASE
pdb|3Q6J|B Chain B, Structural Basis For Carbon Dioxide Binding By 2-Ketopropyl
Coenzyme M OxidoreductaseCARBOXYLASE
Length = 523
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 885 KTKNILIATGSE--VTPFPGIEV----DEETIVSSTGALSLKKGSVWGRLGAEVTAIE-- 936
K KN+++A G+ PG+ D T+V L + GS +G TA+E
Sbjct: 174 KAKNLILAVGAGPGTLDVPGVNAKGVFDHATLVEE---LDYEPGSTVVVVGGSKTAVEYG 230
Query: 937 -FMNAIGGMGI------------DGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITV 983
F NA G + D E + +QGM+ G+ VT + N V
Sbjct: 231 CFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDA-NGRV 289
Query: 984 TIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNI 1043
P + + D + + +G +P + L + +G++ KG V VN QT +PN+
Sbjct: 290 QAVVAMTPNGEMRIETDFVFLGLGEQPRSAELA-KILGLDLGPKGEVLVNEYLQTSVPNV 348
Query: 1044 FAIGDCIHGPMLAHKAEDEGIVCVEGIAGDK 1074
+A+GD I GPM KA G + G+K
Sbjct: 349 YAVGDLIGGPMEMFKARKSGCYAARNVMGEK 379
>pdb|3L8K|A Chain A, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
pdb|3L8K|B Chain B, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
Length = 466
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 25/212 (11%)
Query: 857 VTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPF--PGIE---------- 904
+T G+ KI P V V +G E +T+ ++IA+G+E PG+E
Sbjct: 104 LTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLPGVEYCLTSDDIFG 163
Query: 905 -------VDEETIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRI 957
+ ++ ++ G + L+ S++ +G + IE ++ D ++ I
Sbjct: 164 YKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSI 223
Query: 958 LGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGL 1017
L + K + VT K D+ I + KD +KK + +++++ GRRP G
Sbjct: 224 LK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKS-IFTNSVVLAAGRRPVIPE-GA 278
Query: 1018 EEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDC 1049
EIG+ + G V V+ +T IPN+FA GD
Sbjct: 279 REIGLSISKTGIV-VDETMKTNIPNVFATGDA 309
Score = 36.6 bits (83), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
GIE ++ + A+ +G +K++ ++ + +++G +IG + LINE LA+
Sbjct: 369 GIEIVEAEYNMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVA 428
Query: 512 YGASCEDVARTCHAHPT 528
YG + + +A HP+
Sbjct: 429 YGLNAKQLASFAEQHPS 445
>pdb|1GER|A Chain A, The Structure Of Glutathione Reductase From Escherichia Coli
At 1.86 Angstroms Resolution: Comparison With The Enzyme
From Human Erythrocytes
pdb|1GER|B Chain B, The Structure Of Glutathione Reductase From Escherichia Coli
At 1.86 Angstroms Resolution: Comparison With The Enzyme
From Human Erythrocytes
pdb|1GET|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GET|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 34/241 (14%)
Query: 827 KLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKT 886
K N ET++ +++A + + ++ N V + G + T+ V + E +
Sbjct: 78 KFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV-----NGETITA 132
Query: 887 KNILIATGSEVT--PFPGIEVDEETIVSSTGALSLKK-GSVWGRLGAEVTAIEFMNAIGG 943
+ILIATG + PG+E + S G +L +GA A+E I G
Sbjct: 133 DHILIATGGRPSHPDIPGVEYG----IDSDGFFALPALPERVAVVGAGYIAVELAGVING 188
Query: 944 MG---------------IDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGD-NITVTIEN 987
+G D +++ ++ +G Q K+ D ++T+ +E+
Sbjct: 189 LGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELED 248
Query: 988 VKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIG 1047
+ T D L+ +GR P N+ LE G++ +EKG + V+ T I I+A+G
Sbjct: 249 GRSET------VDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVG 302
Query: 1048 D 1048
D
Sbjct: 303 D 303
Score = 37.7 bits (86), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 537 LGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGTKSAAV 592
LGGTC+NVGC+P K + + + H G + K N ET++ +++A +
Sbjct: 38 LGGTCVNVGCVPKKVMWHAAQIREAIHMYG-PDYGFDTTINKFNWETLIASRTAYI 92
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 454 EYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYG 513
+ KV K F A A T + +K++ +K++G+H IG E++ +A++ G
Sbjct: 367 QVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMG 426
Query: 514 ASCEDVARTCHAHPTVCVE 532
A+ +D T HPT E
Sbjct: 427 ATKKDFDNTVAIHPTAAEE 445
>pdb|1FEA|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase At
2.2 Angstrom Resolution
pdb|1FEA|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase At
2.2 Angstrom Resolution
pdb|1FEA|C Chain C, Unliganded Crithidia Fasciculata Trypanothione Reductase At
2.2 Angstrom Resolution
pdb|1FEA|D Chain D, Unliganded Crithidia Fasciculata Trypanothione Reductase At
2.2 Angstrom Resolution
pdb|1FEB|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase At
2.0 Angstrom Resolution
pdb|1FEB|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase At
2.0 Angstrom Resolution
pdb|1FEC|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase At
1.7 Angstrom Resolution
pdb|1FEC|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase At
1.7 Angstrom Resolution
Length = 490
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 39/277 (14%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNK-VTQLNGHGKITGPNTVTVIKS----DGS 880
V+ N + ++ K+ AV + +F + +T G G + +TV V +S
Sbjct: 87 VRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAV 146
Query: 881 TEEVKTKNILIATGSEVTPFP---GIEVDEETIVSSTGALSLKKGSVWGR-LGAEVTAIE 936
E + T+ IL+ATGS +P GIE D+ I S+ A L + +G +IE
Sbjct: 147 LETLDTEYILLATGS----WPQHLGIEGDDLCITSNE-AFYLDEAPKRALCVGGGYISIE 201
Query: 937 FMN------AIGGM------------GIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSG 978
F A GG G D E+ KQ L G+ + +K+
Sbjct: 202 FAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNA 261
Query: 979 DNIT-VTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQ 1037
D V E+ E D +++ +GR P + L LE+ G+E + G + V++ +
Sbjct: 262 DGTRHVVFES------GAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSK 315
Query: 1038 TVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAGDK 1074
T + NI+AIGD ML A +EG V+ + +K
Sbjct: 316 TNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANK 352
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 537 LGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGTKSAAVKALT 596
LGGTC+NVGC+P K ++ ++Y ++ E V+ N + ++ K+ AV +
Sbjct: 47 LGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGIN 106
Query: 597 GGIAHLF 603
+F
Sbjct: 107 DSYEGMF 113
Score = 37.7 bits (86), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 477 FVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPT 528
V+++ + +VLGVH++G ++ E+I + ++ GA D T HPT
Sbjct: 411 MVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPT 462
>pdb|2TPR|A Chain A, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
pdb|2TPR|B Chain B, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
Length = 490
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 39/277 (14%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNK-VTQLNGHGKITGPNTVTVIKS----DGS 880
V+ N + ++ K+ AV + +F + +T G G + +TV V +S
Sbjct: 87 VRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAV 146
Query: 881 TEEVKTKNILIATGSEVTPFP---GIEVDEETIVSSTGALSLKKGSVWGR-LGAEVTAIE 936
E + T+ IL+ATGS +P GIE D+ I S+ A L + +G +IE
Sbjct: 147 LETLDTEYILLATGS----WPQHLGIEGDDLCITSNE-AFYLDEAPKRALCVGGGYISIE 201
Query: 937 FMN------AIGGM------------GIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSG 978
F A GG G D E+ KQ L G+ + +K+
Sbjct: 202 FAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNA 261
Query: 979 DNIT-VTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQ 1037
D V E+ E D +++ +GR P + L LE+ G+E + G + V++ +
Sbjct: 262 DGTRHVVFES------GAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSK 315
Query: 1038 TVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAGDK 1074
T + NI+AIGD ML A +EG V+ + +K
Sbjct: 316 TNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANK 352
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 537 LGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGTKSAAVKALT 596
LGGTC+NVGC+P K ++ ++Y ++ E V+ N + ++ K+ AV +
Sbjct: 47 LGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGIN 106
Query: 597 GGIAHLF 603
+F
Sbjct: 107 DSYEGMF 113
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 477 FVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPT 528
V+++ + +VLGVH++G ++ E+I + ++ GA DV T HPT
Sbjct: 411 MVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDVYNTIGVHPT 462
>pdb|1ZK7|A Chain A, Crystal Structure Of Tn501 Mera
pdb|1ZX9|A Chain A, Crystal Structure Of Tn501 Mera
Length = 467
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 34/222 (15%)
Query: 857 VTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSE--VTPFPGIEVDEETIVSST 914
+T ++G + ++TV ++G V L+ATG+ V P PG++ E +ST
Sbjct: 110 ITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLK--ESPYWTST 167
Query: 915 GALSLKKGSVWGRL---GAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFK----L 967
AL+ ++ RL G+ V A+E A +G +L + + F+ +
Sbjct: 168 EALA--SDTIPERLAVIGSSVVALELAQAFARLG-------SKVTVLARNTLFFREDPAI 218
Query: 968 GTKVTGASKSGDNITVTIENVKDP------------TKKEELSCDALLVCVGRRPYTHNL 1015
G VT A ++ + I V +E+ + T EL D LLV GR P T +L
Sbjct: 219 GEAVTAAFRA-EGIEV-LEHTQASQVAHMDGEFVLTTTHGELRADKLLVATGRTPNTRSL 276
Query: 1016 GLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLAH 1057
L+ G+ + +G + ++ +T PNI+A GDC P +
Sbjct: 277 ALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDCTDQPQFVY 318
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 529 VCVEKNDTLGGTCLNVGCIPSKALLNNSHYYHM 561
V + + T+GGTC+NVGC+PSK ++ +H H+
Sbjct: 30 VTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHL 62
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 452 GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAME 511
GIE RA N DT GF+K++ ++ + +++GV + P AGELI A LA+
Sbjct: 367 GIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIR 426
Query: 512 YGASCEDVA 520
+ +++A
Sbjct: 427 NRMTVQELA 435
>pdb|4DNA|A Chain A, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
pdb|4DNA|B Chain B, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
Length = 463
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 860 LNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTP---FPGIEVDEETIVSSTGA 916
L+ ++ GPNTV ++ S G T V + I+IA G +P PG E ++S A
Sbjct: 111 LDTRAELAGPNTVKLLAS-GKT--VTAERIVIAVGGHPSPHDALPG----HELCITSNEA 163
Query: 917 LSLK--KGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGA 974
L S+ G A+EF N G+G+ + + + IL + + G
Sbjct: 164 FDLPALPESIL-IAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDXRRGLHAAXE 222
Query: 975 SKS----GDNITVTI------ENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEK 1024
K ++I ++ V K E+ D + + +GR P T+ LGLE G+
Sbjct: 223 EKGIRILCEDIIQSVSADADGRRVATTXKHGEIVADQVXLALGRXPNTNGLGLEAAGVRT 282
Query: 1025 DEKGRVPVNSRFQTVIPNIFAIGD 1048
+E G + V++ +T P I+A+GD
Sbjct: 283 NELGAIIVDAFSRTSTPGIYALGD 306
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 488 KVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPTVCVE 532
KV+G HI+G AGE +++ G + +D RT HPT E
Sbjct: 401 KVVGAHILGHDAGEXAQLLGISLRAGCTKDDFDRTXAVHPTAAEE 445
>pdb|2WBA|A Chain A, Properties Of Trypanothione Reductase From T. Brucei
pdb|2WBA|B Chain B, Properties Of Trypanothione Reductase From T. Brucei
Length = 492
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 31/273 (11%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNK-VTQLNGHGKITGPNTVTVIKSDGSTEEV 884
VK N + ++ K+ AV + +F + + G G + N V V ++ V
Sbjct: 88 VKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAV 147
Query: 885 KTK----NILIATGS--EVTPFPGIE-------------VDEETIVSSTGALSLKKGSVW 925
K + +IL+ATGS ++ PGIE + G +S++ ++
Sbjct: 148 KERLQADHILLATGSWPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIF 207
Query: 926 GRL---GAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNIT 982
G +VT + + N + G D + ++ + L G++ S + D
Sbjct: 208 NAYKPPGGKVT-LCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSK 266
Query: 983 -VTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIP 1041
VT E+ K L D +++ +GR P T++L L +G++ KG V V+ +T +P
Sbjct: 267 HVTFESGK------TLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVP 320
Query: 1042 NIFAIGDCIHGPMLAHKAEDEGIVCVEGIAGDK 1074
NI+AIGD ML A +EG V+ + G+K
Sbjct: 321 NIYAIGDITDRLMLTPVAINEGAALVDTVFGNK 353
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 488 KVLGVHIIGPAAGELINEAVLAMEYGASCEDV-ARTCHAHPTVCVEKNDTLGGTCLNVGC 546
K + +IG +G L A YG V +T H P LGGTC+NVGC
Sbjct: 3 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYA-----ALGGTCVNVGC 57
Query: 547 IPSKALLNNSHYYHMAHSGDMKARGIEVEG--VKLNLETMMGTKSAAV 592
+P K ++ + Y M H + G E +G VK N + ++ K+ AV
Sbjct: 58 VPKKLMVTGAQY--MDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAV 103
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 479 KVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPT 528
K++ + VLGVH++G A E+I + + A D T HPT
Sbjct: 414 KIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPT 463
>pdb|2WOI|A Chain A, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|B Chain B, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|C Chain C, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|D Chain D, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOV|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Bound Nadp.
pdb|2WOV|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Bound Nadp.
pdb|2WOV|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Bound Nadp.
pdb|2WOV|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Bound Nadp.
pdb|2WOW|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WP5|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP6|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WPC|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPE|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPF|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
Length = 495
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 31/273 (11%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNK-VTQLNGHGKITGPNTVTVIKSDGSTEEV 884
VK N + ++ K+ AV + +F + + G G + N V V ++ V
Sbjct: 91 VKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAV 150
Query: 885 KTK----NILIATGS--EVTPFPGIE-------------VDEETIVSSTGALSLKKGSVW 925
K + +IL+ATGS ++ PGIE + G +S++ ++
Sbjct: 151 KERLQADHILLATGSWPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIF 210
Query: 926 GRL---GAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNIT 982
G +VT + + N + G D + ++ + L G++ S + D
Sbjct: 211 NAYKPPGGKVT-LCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSK 269
Query: 983 -VTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIP 1041
VT E+ K L D +++ +GR P T++L L +G++ KG V V+ +T +P
Sbjct: 270 HVTFESGK------TLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVP 323
Query: 1042 NIFAIGDCIHGPMLAHKAEDEGIVCVEGIAGDK 1074
NI+AIGD ML A +EG V+ + G+K
Sbjct: 324 NIYAIGDITDRLMLTPVAINEGAALVDTVFGNK 356
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 488 KVLGVHIIGPAAGELINEAVLAMEYGASCEDV-ARTCHAHPTVCVEKNDTLGGTCLNVGC 546
K + +IG +G L A YG V +T H P LGGTC+NVGC
Sbjct: 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYA-----ALGGTCVNVGC 60
Query: 547 IPSKALLNNSHYYHMAHSGDMKARGIEVEG--VKLNLETMMGTKSAAV 592
+P K ++ + Y M H + G E +G VK N + ++ K+ AV
Sbjct: 61 VPKKLMVTGAQY--MDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAV 106
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 479 KVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPT 528
K++ + VLGVH++G A E+I + + A D T HPT
Sbjct: 417 KIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPT 466
>pdb|1TYT|A Chain A, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
pdb|1TYT|B Chain B, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
Length = 487
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 119/277 (42%), Gaps = 39/277 (14%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNK-VTQLNGHGKITGPNTVTVIKS----DGS 880
V+ N + ++ K+ AV + +F + +T G G + +TV V +S
Sbjct: 88 VRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAV 147
Query: 881 TEEVKTKNILIATGSEVTPFP---GIEVDEETIVSSTGALSLKKGSVWGR-LGAEVTAIE 936
E + T+ IL+ATGS +P GIE D+ I S+ A L + +G +IE
Sbjct: 148 LETLDTEYILLATGS----WPQHLGIEGDDLCITSNE-AFYLDEAPKRALCVGGGYISIE 202
Query: 937 F------MNAIGGM------------GIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSG 978
F A GG G D E+ KQ L G+ + +K+
Sbjct: 203 FAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNA 262
Query: 979 DNIT-VTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQ 1037
D V E+ E D +++ +GR P + L L++ G+E + G + V++ +
Sbjct: 263 DGTRHVVFES------GAEADYDVVMLAIGRVPRSQTLQLDKAGVEVAKNGAIKVDAYSK 316
Query: 1038 TVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAGDK 1074
T + NI+AIGD ML A +EG V+ + +K
Sbjct: 317 TNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANK 353
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 537 LGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGTKSAAVKALT 596
LGGTC+NVGC+P K ++ ++Y ++ E V+ N + ++ K+ AV +
Sbjct: 48 LGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGIN 107
Query: 597 GGIAHLF 603
+F
Sbjct: 108 DSYEGMF 114
Score = 37.7 bits (86), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 477 FVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPT 528
V+++ + +VLGVH++G ++ E+I + ++ GA D T HPT
Sbjct: 412 MVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPT 463
>pdb|1TYP|A Chain A, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
pdb|1TYP|B Chain B, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
Length = 487
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 119/277 (42%), Gaps = 39/277 (14%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNK-VTQLNGHGKITGPNTVTVIKS----DGS 880
V+ N + ++ K+ AV + +F + +T G G + +TV V +S
Sbjct: 88 VRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGWGALQDNHTVLVRESADPNSAV 147
Query: 881 TEEVKTKNILIATGSEVTPFP---GIEVDEETIVSSTGALSLKKGSVWGR-LGAEVTAIE 936
E + T+ IL+ATGS +P GIE D+ I S+ A L + +G +IE
Sbjct: 148 LETLDTEYILLATGS----WPQHLGIEGDDLCITSNE-AFYLDEAPKRALCVGGGYISIE 202
Query: 937 FMN------AIGGM------------GIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSG 978
F A GG G D E+ KQ L G+ + +K+
Sbjct: 203 FAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNA 262
Query: 979 DNIT-VTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQ 1037
D V E+ E D +++ +GR P + L L++ G+E + G + V++ +
Sbjct: 263 DGTRHVVFES------GAEADYDVVMLAIGRVPRSQTLQLDKAGVEVAKNGAIKVDAYSK 316
Query: 1038 TVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAGDK 1074
T + NI+AIGD ML A +EG V+ + +K
Sbjct: 317 TNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANK 353
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 537 LGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGTKSAAVKALT 596
LGGTC+NVGC+P K ++ ++Y ++ E V+ N + ++ K+ AV +
Sbjct: 48 LGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGIN 107
Query: 597 GGIAHLF 603
+F
Sbjct: 108 DSYEGMF 114
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 477 FVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPT 528
V+++ + +VLGVH++G ++ E+I + ++ GA D T HPT
Sbjct: 412 MVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPT 463
>pdb|2R9Z|A Chain A, Glutathione Amide Reductase From Chromatium Gracile
pdb|2R9Z|B Chain B, Glutathione Amide Reductase From Chromatium Gracile
pdb|2RAB|A Chain A, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
pdb|2RAB|B Chain B, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
Length = 463
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 36/213 (16%)
Query: 857 VTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSE--VTPFPGIEVDEETIVSST 914
+T+++GH + +T+ V + + +I+IATG V PG E+ ++S
Sbjct: 107 ITRVDGHARFVDAHTIEV-----EGQRLSADHIVIATGGRPIVPRLPGAELG----ITSD 157
Query: 915 GALSLKK--------GSVWGRLGAEVTAI--EFMNAIGGMGIDGEVAKQFQRILGK---- 960
G +L++ G+ G +G E+ + F + + + ++ + QF +L
Sbjct: 158 GFFALQQQPKRVAIIGA--GYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAE 215
Query: 961 ----QGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLG 1016
QG++ L V + T+ +D T+ E D+++ VGR P T +LG
Sbjct: 216 NMHAQGIETHLEFAVAALERDAQGTTLV---AQDGTRLE--GFDSVIWAVGRAPNTRDLG 270
Query: 1017 LEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDC 1049
LE GIE G VP ++ T +P ++A+GD
Sbjct: 271 LEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDI 303
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 529 VCVEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLETMMGTK 588
V + ++ LGGTC+NVGC+P K + SH D G++ G L+ ++ +
Sbjct: 30 VALIESKALGGTCVNVGCVPKKVMWYASHLAEAVR--DAPGFGVQASGGTLDWPRLVAGR 87
Query: 589 SAAVKAL 595
+ A+
Sbjct: 88 DRYIGAI 94
Score = 33.5 bits (75), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 488 KVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHP 527
+V+GVH+IG A E++ +A++ GA+ D T HP
Sbjct: 399 RVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHP 438
>pdb|3DGZ|A Chain A, Crystal Structure Of Mouse Mitochondrial Thioredoxin
Reductase, C- Terminal 3-Residue Truncation
Length = 488
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 24/247 (9%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVK 885
V+ N +TM VK+L G + KV N +TV + G +
Sbjct: 88 VQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLS 147
Query: 886 TKNILIATGSEVTPFP---------GIEVDE---------ETIVSSTGALSLKKGSVWGR 927
++I+IATG +P GI D+ +T+V ++L+
Sbjct: 148 AEHIVIATGGRPR-YPTQVKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTG 206
Query: 928 LGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDN-ITVTIE 986
+G + T + M +I G D +++ + G QF G + K N + VT E
Sbjct: 207 IGLDTTVM--MRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWE 264
Query: 987 NVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKG-RVPVNSRFQTVIPNIFA 1045
+ K++ + D +L +GR P T L LE+ GI + K ++ V+++ T +P+I+A
Sbjct: 265 D-HASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIYA 323
Query: 1046 IGDCIHG 1052
IGD G
Sbjct: 324 IGDVAEG 330
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 489 VLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPTVCVEK 533
VLG+H +GP AGE+ L ++ GAS V +T HPT C E+
Sbjct: 427 VLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPT-CSEE 470
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 21/72 (29%)
Query: 537 LGGTCLNVGCIPSK---------ALLNNSHYYHMAHSGDMKARGIEV-EGVKLNLETMMG 586
LGGTC+NVGCIP K ++ ++H+Y G EV + V+ N +TM
Sbjct: 49 LGGTCVNVGCIPKKLMHQAALLGGMIRDAHHY-----------GWEVAQPVQHNWKTMAE 97
Query: 587 TKSAAVKALTGG 598
VK+L G
Sbjct: 98 AVQNHVKSLNWG 109
>pdb|1ZDL|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
pdb|1ZKQ|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
Length = 517
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 24/247 (9%)
Query: 826 VKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVK 885
V+ N +TM VK+L G + KV N +TV + G +
Sbjct: 114 VQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLS 173
Query: 886 TKNILIATGSEVTPFP---------GIEVDE---------ETIVSSTGALSLKKGSVWGR 927
++I+IATG +P GI D+ +T+V ++L+
Sbjct: 174 AEHIVIATGGRPR-YPTQVKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTG 232
Query: 928 LGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDN-ITVTIE 986
+G + T + M +I G D +++ + G QF G + K N + VT E
Sbjct: 233 IGLDTTVM--MRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWE 290
Query: 987 NVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKG-RVPVNSRFQTVIPNIFA 1045
+ K++ + D +L +GR P T L LE+ GI + K ++ V+++ T +P+I+A
Sbjct: 291 D-HASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIYA 349
Query: 1046 IGDCIHG 1052
IGD G
Sbjct: 350 IGDVAEG 356
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 489 VLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPTVCVEK 533
VLG+H +GP AGE+ L ++ GAS V +T HPT C E+
Sbjct: 453 VLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPT-CSEE 496
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 21/72 (29%)
Query: 537 LGGTCLNVGCIPSK---------ALLNNSHYYHMAHSGDMKARGIEV-EGVKLNLETMMG 586
LGGTC+NVGCIP K ++ ++H+Y G EV + V+ N +TM
Sbjct: 75 LGGTCVNVGCIPKKLMHQAALLGGMIRDAHHY-----------GWEVAQPVQHNWKTMAE 123
Query: 587 TKSAAVKALTGG 598
VK+L G
Sbjct: 124 AVQNHVKSLNWG 135
>pdb|1XDI|A Chain A, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
pdb|1XDI|B Chain B, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
Length = 499
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 46/201 (22%)
Query: 877 SDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVSSTGALSLKKGSVWGRL-------- 928
+DGST E + +L+ATG+ P + D E I++ W +L
Sbjct: 136 ADGSTSEHEADVVLVATGASPRILPSAQPDGERILT------------WRQLYDLDALPD 183
Query: 929 -----GAEVTAIEFMNAIGGMGI---------------DGEVAKQFQRILGKQGMQFKLG 968
G+ VT EF++A +G+ D + A + ++G++
Sbjct: 184 HLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKN 243
Query: 969 TKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKG 1028
+ +++G + VT+ T + L+ +G P T LGLE +GI+
Sbjct: 244 ARAASVTRTGAGVLVTM------TDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGN 297
Query: 1029 RVPVNSRFQTVIPNIFAIGDC 1049
+ V+ +T+ I+A GDC
Sbjct: 298 YLTVDRVSRTLATGIYAAGDC 318
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 460 FPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDV 519
P N+RAK + GFVK+ + T V+G ++ P A ELI +A++ + ++
Sbjct: 384 LPLRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNEL 443
Query: 520 ARTCHAHPTV 529
A+T +P++
Sbjct: 444 AQTLAVYPSL 453
>pdb|3OC4|A Chain A, Crystal Structure Of A Pyridine Nucleotide-Disulfide Family
Oxidoreductase From The Enterococcus Faecalis V583
pdb|3OC4|B Chain B, Crystal Structure Of A Pyridine Nucleotide-Disulfide Family
Oxidoreductase From The Enterococcus Faecalis V583
Length = 452
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 946 IDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVC 1005
D E + Q+ L KQ + F V G ++ + I + T ++E+SCD+ +
Sbjct: 187 FDKEXVAEVQKSLEKQAVIFHFEETVLGIEETANGIVL-------ETSEQEISCDSGIFA 239
Query: 1006 VGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCI 1050
+ P L + I+++ + V++ QT +PN+FAIGDCI
Sbjct: 240 LNLHP---QLAYLDKKIQRNLDQTIAVDAYLQTSVPNVFAIGDCI 281
>pdb|3DGH|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
pdb|3DGH|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
Length = 483
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 20/217 (9%)
Query: 852 FKSNKVTQLNGHGKITGPNTVTV-IKSDGSTEEVKTKNILIATGSEVTPFPG-------- 902
+ KV +NG G +T+ +KS T +T I + PG
Sbjct: 118 LRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEYGITS 177
Query: 903 ---IEVDEE---TIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQR 956
+D E T+V G + L+ LG E T + + +I G D ++A+
Sbjct: 178 DDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVM--VRSIVLRGFDQQMAELVAA 235
Query: 957 ILGKQGMQFKLGTKVTGASKSGDN-ITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNL 1015
+ ++G+ F T K D + V +NV+ + E++ D +L +GR+ +L
Sbjct: 236 SMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVY-DTVLWAIGRKGLVDDL 294
Query: 1016 GLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG 1052
L G+ +K ++PV+S+ T + NI+A+GD I+G
Sbjct: 295 NLPNAGVTV-QKDKIPVDSQEATNVANIYAVGDIIYG 330
Score = 37.0 bits (84), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 477 FVKVLGDKLTD-KVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPTVCVE 532
++K + ++ D +V G+H IGP AGE+I A++ G + + T HPT E
Sbjct: 414 YLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEE 470
Score = 33.5 bits (75), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 527 PTVCVEKNDTLGGTCLNVGCIPSKAL 552
PT + +GGTC+NVGCIP K +
Sbjct: 43 PTPTLGTKWGVGGTCVNVGCIPKKLM 68
>pdb|3DH9|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
pdb|3DH9|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
Length = 482
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 20/217 (9%)
Query: 852 FKSNKVTQLNGHGKITGPNTVTV-IKSDGSTEEVKTKNILIATGSEVTPFPG-------- 902
+ KV +NG G +T+ +KS T +T I + PG
Sbjct: 114 LRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEYGITS 173
Query: 903 ---IEVDEE---TIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQR 956
+D E T+V G + L+ LG E T + + +I G D ++A+
Sbjct: 174 DDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVM--VRSIVLRGFDQQMAELVAA 231
Query: 957 ILGKQGMQFKLGTKVTGASKSGDN-ITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNL 1015
+ ++G+ F T K D + V +NV+ + E++ D +L +GR+ +L
Sbjct: 232 SMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVY-DTVLWAIGRKGLVDDL 290
Query: 1016 GLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG 1052
L G+ +K ++PV+S+ T + NI+A+GD I+G
Sbjct: 291 NLPNAGVTV-QKDKIPVDSQEATNVANIYAVGDIIYG 326
Score = 37.0 bits (84), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 477 FVKVLGDKLTD-KVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPTVCVE 532
++K + ++ D +V G+H IGP AGE+I A++ G + + T HPT E
Sbjct: 410 YLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEE 466
Score = 33.5 bits (75), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 527 PTVCVEKNDTLGGTCLNVGCIPSKAL 552
PT + +GGTC+NVGCIP K +
Sbjct: 39 PTPTLGTKWGVGGTCVNVGCIPKKLM 64
>pdb|2NVK|X Chain X, Crystal Structure Of Thioredoxin Reductase From Drosophila
Melanogaster
Length = 488
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 20/217 (9%)
Query: 852 FKSNKVTQLNGHGKITGPNTVTV-IKSDGSTEEVKTKNILIATGSEVTPFPG-------- 902
+ KV +NG G +T+ +KS T +T I + PG
Sbjct: 118 LRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEYGITS 177
Query: 903 ---IEVDEE---TIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQR 956
+D E T+V G + L+ LG E T + + +I G D ++A+
Sbjct: 178 DDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVM--VRSIVLRGFDQQMAELVAA 235
Query: 957 ILGKQGMQFKLGTKVTGASKSGDN-ITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNL 1015
+ ++G+ F T K D + V +NV+ + E++ D +L +GR+ +L
Sbjct: 236 SMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVY-DTVLWAIGRKGLVDDL 294
Query: 1016 GLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG 1052
L G+ +K ++PV+S+ T + NI+A+GD I+G
Sbjct: 295 NLPNAGVTV-QKDKIPVDSQEATNVANIYAVGDIIYG 330
Score = 37.0 bits (84), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 477 FVKVLGDKLTD-KVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPTVCVE 532
++K + ++ D +V G+H IGP AGE+I A++ G + + T HPT E
Sbjct: 414 YLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEE 470
Score = 33.5 bits (75), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 527 PTVCVEKNDTLGGTCLNVGCIPSKAL 552
PT + +GGTC+NVGCIP K +
Sbjct: 43 PTPTLGTKWGVGGTCVNVGCIPKKLM 68
>pdb|3CGC|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis Of
Dual Nad(p)h Specificity
pdb|3CGC|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis Of
Dual Nad(p)h Specificity
pdb|3CGD|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis Of
Dual Nad(p)h Specificity
pdb|3CGD|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis Of
Dual Nad(p)h Specificity
pdb|3CGE|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis Of
Dual Nad(P)h Specificity
pdb|3CGE|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis Of
Dual Nad(P)h Specificity
Length = 480
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 904 EVDEETIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGM 963
+V++ TI+ GA+ L+ + LG +V IE + IG + DG++A+ + K +
Sbjct: 185 KVEDVTIIGG-GAIGLEMAETFVELGKKVRMIERNDHIGTI-YDGDMAEYIYKEADKHHI 242
Query: 964 QFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIE 1023
+ L + A K + + T K D +LV VG +P T L E I
Sbjct: 243 EI-LTNENVKAFKGNERVEAV------ETDKGTYKADLVLVSVGVKPNTDFL--EGTNIR 293
Query: 1024 KDEKGRVPVNSRFQTVIPNIFAIGDC 1049
+ KG + VN+ QT + +++A GDC
Sbjct: 294 TNHKGAIEVNAYMQTNVQDVYAAGDC 319
>pdb|2BC0|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh Oxidase:
Wild-Type Nox
pdb|2BC0|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh Oxidase:
Wild-Type Nox
Length = 490
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Query: 911 VSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTK 970
V G + ++ + R G EV I+ ++ D ++ + + + G+Q G
Sbjct: 199 VVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGET 258
Query: 971 VTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRV 1030
V + +G +E + T K E D +++ VG RP T LG +I + ++ G
Sbjct: 259 VKEVAGNG-----KVEKI--ITDKNEYDVDMVILAVGFRPNT-TLGNGKIDLFRN--GAF 308
Query: 1031 PVNSRFQTVIPNIFAIGDC 1049
VN R +T IP ++AIGDC
Sbjct: 309 LVNKRQETSIPGVYAIGDC 327
>pdb|2BC1|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh Oxidase:
C44s Nox
pdb|2BC1|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh Oxidase:
C44s Nox
pdb|2BCP|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh Oxidase:
C44s Nox With Azide
pdb|2BCP|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh Oxidase:
C44s Nox With Azide
Length = 490
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Query: 911 VSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTK 970
V G + ++ + R G EV I+ ++ D ++ + + + G+Q G
Sbjct: 199 VVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGET 258
Query: 971 VTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRV 1030
V + +G +E + T K E D +++ VG RP T LG +I + ++ G
Sbjct: 259 VKEVAGNG-----KVEKI--ITDKNEYDVDMVILAVGFRPNT-TLGNGKIDLFRN--GAF 308
Query: 1031 PVNSRFQTVIPNIFAIGDC 1049
VN R +T IP ++AIGDC
Sbjct: 309 LVNKRQETSIPGVYAIGDC 327
>pdb|3CGB|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis Of
Dual Nad(P)h Specificity
pdb|3CGB|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis Of
Dual Nad(P)h Specificity
Length = 480
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
Query: 904 EVDEETIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGM 963
+V++ TI+ GA+ L+ + LG +V IE + IG + DG+ A+ + K +
Sbjct: 185 KVEDVTIIGG-GAIGLEXAETFVELGKKVRXIERNDHIGTI-YDGDXAEYIYKEADKHHI 242
Query: 964 QFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIE 1023
+ L + A K + + T K D +LV VG +P T L E I
Sbjct: 243 EI-LTNENVKAFKGNERVEAV------ETDKGTYKADLVLVSVGVKPNTDFL--EGTNIR 293
Query: 1024 KDEKGRVPVNSRFQTVIPNIFAIGDC 1049
+ KG + VN+ QT + +++A GDC
Sbjct: 294 TNHKGAIEVNAYXQTNVQDVYAAGDC 319
>pdb|3CTY|A Chain A, Crystal Structure Of T. Acidophilum Thioredoxin Reductase
pdb|3CTY|B Chain B, Crystal Structure Of T. Acidophilum Thioredoxin Reductase
Length = 319
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 978 GDNITVTIENVKDPTKKEE--LSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSR 1035
GD VT KD T EE + D + + VG P T L ++ G++ DE+G + V+SR
Sbjct: 218 GDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFL--KDSGVKLDERGYIVVDSR 275
Query: 1036 FQTVIPNIFAIGDCIHG 1052
+T +P ++A GD G
Sbjct: 276 QRTSVPGVYAAGDVTSG 292
>pdb|1NDA|A Chain A, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|B Chain B, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|C Chain C, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|D Chain D, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
Length = 491
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 31/234 (13%)
Query: 862 GHGKITGPNTVTVIKS----DGSTEEVKTKNILIATGS--EVTPFPGIEVDEETIVSSTG 915
G G + N V V +S E ++T+NIL+A+GS + PGIE +SS
Sbjct: 125 GWGSLESKNVVNVRESADPASAVKERLETENILLASGSWPHMPNIPGIE----HCISSNE 180
Query: 916 ALSLKKGSVWG-RLGAEVTAIEFMNAIGGMGI-DGEVAKQFQRILGKQGMQFKLGTKVTG 973
A L + +G ++EF DG+V ++ + +G L ++T
Sbjct: 181 AFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREELTK 240
Query: 974 ASKSGDNITVTIENVKDPTKKE---------------ELSCDALLVCVGRRPYTHNLGLE 1018
+ +T EN P K E ++ D +++ +GR P T +L L+
Sbjct: 241 QLTANGIQILTKEN---PAKVELNADGSKSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQ 297
Query: 1019 EIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAG 1072
G+ + G V V+ +T + NI+AIGD + ML A +E V+ + G
Sbjct: 298 NAGV-MIKNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVFG 350
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 537 LGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLE--TMMGTKSAAVKA 594
LGGTC+NVGC+P K ++ + Y M H + G E + L E ++ K AV
Sbjct: 48 LGGTCVNVGCVPKKLMVTGAQY--MEHLRESAGFGWEFDRTTLRAEWKKLIAVKDEAVLN 105
Query: 595 LTGGIAHLFK 604
+ +F+
Sbjct: 106 INKSYEEMFR 115
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 479 KVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPT 528
K++ + VLGVH++G A E+I + ++ A D T HPT
Sbjct: 413 KIITNHSDGTVLGVHLLGDNAPEIIQGVGICLKLNAKISDFYNTIGVHPT 462
>pdb|2HQM|A Chain A, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
pdb|2HQM|B Chain B, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
Length = 479
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 33/245 (13%)
Query: 828 LNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTK 887
N + A V L G + KV + G + V V K D +TE
Sbjct: 91 FNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSAN 150
Query: 888 NILIATGSE-VTP--FPGIEVDEETIVSSTGALSL----KKGSVWGRLGAEVTAIEFMNA 940
+IL+ATG + + P PG E+ + S G L KK V +GA IE
Sbjct: 151 HILVATGGKAIFPENIPGFELGTD----SDGFFRLEEQPKKVVV---VGAGYIGIELAGV 203
Query: 941 IGGMG------IDGE-VAKQFQRILG--------KQGMQFKLGTKVTGASKSGDNITVTI 985
G+G I GE V ++F + K+G+ +K+ K+ + + I
Sbjct: 204 FHGLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKI 263
Query: 986 ENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFA 1045
++ D +++ D L+ +GR+ + +G E +GI+ + ++ + T +PNI++
Sbjct: 264 -HMNDSKSIDDV--DELIWTIGRKSHL-GMGSENVGIKLNSHDQIIADEYQNTNVPNIYS 319
Query: 1046 IGDCI 1050
+GD +
Sbjct: 320 LGDVV 324
Score = 34.3 bits (77), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 537 LGGTCLNVGCIPSKAL 552
LGGTC+NVGC+P K +
Sbjct: 45 LGGTCVNVGCVPKKVM 60
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 487 DKVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPT 528
+KV+G+HI+G ++ E++ +A++ GA+ D HPT
Sbjct: 421 EKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPT 462
>pdb|4EQX|A Chain A, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQX|B Chain B, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 907 EETIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFK 966
++ +V G +SL+ G T I + I + +D ++ + L K+ + ++
Sbjct: 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILDELDKREIPYR 206
Query: 967 LGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDE 1026
L ++ + G+ IT V+ D ++ VG P ++ +E I+ D
Sbjct: 207 LNEEINAIN--GNEITFKSGKVE--------HYDMIIEGVGTHP--NSKFIESSNIKLDR 254
Query: 1027 KGRVPVNSRFQTVIPNIFAIGDC 1049
KG +PVN +F+T +PNI+AIGD
Sbjct: 255 KGFIPVNDKFETNVPNIYAIGDI 277
>pdb|1YQZ|A Chain A, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom Resolution
pdb|1YQZ|B Chain B, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom Resolution
Length = 438
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 907 EETIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFK 966
++ +V G +SL+ G T I + I + +D ++ + L K+ + ++
Sbjct: 149 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILDELDKREIPYR 207
Query: 967 LGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDE 1026
L ++ + G+ IT V+ D ++ VG P ++ +E I+ D
Sbjct: 208 LNEEINAIN--GNEITFKSGKVE--------HYDMIIEGVGTHP--NSKFIESSNIKLDR 255
Query: 1027 KGRVPVNSRFQTVIPNIFAIGDC 1049
KG +PVN +F+T +PNI+AIGD
Sbjct: 256 KGFIPVNDKFETNVPNIYAIGDI 278
>pdb|4EM3|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM3|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM4|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
pdb|4EM4|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
Length = 437
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 907 EETIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFK 966
++ +V G +SL+ G T I + I + +D ++ + L K+ + ++
Sbjct: 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILDELDKREIPYR 206
Query: 967 LGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDE 1026
L ++ + G+ IT V+ D ++ VG P ++ +E I+ D
Sbjct: 207 LNEEINAIN--GNEITFKSGKVE--------HYDMIIEGVGTHP--NSKFIESSNIKLDR 254
Query: 1027 KGRVPVNSRFQTVIPNIFAIGDC 1049
KG +PVN +F+T +PNI+AIGD
Sbjct: 255 KGFIPVNDKFETNVPNIYAIGDI 277
>pdb|4EMW|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
pdb|4EMW|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
Length = 436
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 907 EETIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFK 966
++ +V G +SL+ G T I + I + +D ++ + L K+ + ++
Sbjct: 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILDELDKREIPYR 206
Query: 967 LGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDE 1026
L ++ + G+ IT V+ D ++ VG P ++ +E I+ D
Sbjct: 207 LNEEINAIN--GNEITFKSGKVE--------HYDMIIEGVGTHP--NSKFIESSNIKLDR 254
Query: 1027 KGRVPVNSRFQTVIPNIFAIGDC 1049
KG +PVN +F+T +PNI+AIGD
Sbjct: 255 KGFIPVNDKFETNVPNIYAIGDI 277
>pdb|4EQS|A Chain A, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQS|B Chain B, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 907 EETIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFK 966
++ +V G +SL+ G T I + I + +D ++ + L K+ + ++
Sbjct: 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILDELDKREIPYR 206
Query: 967 LGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDE 1026
L ++ + G+ IT V+ D ++ VG P ++ +E I+ D
Sbjct: 207 LNEEINAIN--GNEITFKSGKVE--------HYDMIIEGVGTHP--NSKFIESSNIKLDR 254
Query: 1027 KGRVPVNSRFQTVIPNIFAIGDC 1049
KG +PVN +F+T +PNI+AIGD
Sbjct: 255 KGFIPVNDKFETNVPNIYAIGDI 277
>pdb|4EQR|A Chain A, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQR|B Chain B, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 907 EETIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFK 966
++ +V G +SL+ G T I + I + +D ++ + L K+ + ++
Sbjct: 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILDELDKREIPYR 206
Query: 967 LGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDE 1026
L ++ + G+ IT V+ D ++ VG P ++ +E I+ D
Sbjct: 207 LNEEINAIN--GNEITFKSGKVE--------HYDMIIEGVGTHP--NSKFIESSNIKLDR 254
Query: 1027 KGRVPVNSRFQTVIPNIFAIGDC 1049
KG +PVN +F+T +PNI+AIGD
Sbjct: 255 KGFIPVNDKFETNVPNIYAIGDI 277
>pdb|3O0H|A Chain A, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
pdb|3O0H|B Chain B, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
Length = 484
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 15/180 (8%)
Query: 882 EEVKTKNILIATGSEVTPFPGIEVDEETIVSST--GALSLKKGSVWGRLGAEVTAIEFMN 939
E + + ILIATG+++ I+ + + S+ L K V +G +EF N
Sbjct: 151 ERISAEKILIATGAKIVSNSAIKGSDLCLTSNEIFDLEKLPKSIVI--VGGGYIGVEFAN 208
Query: 940 AIGGMGIDGE-------VAKQFQ---RILGKQGMQFKLGTKVTGASKSGDNITVTIENVK 989
G+G+ + + F R L M K + + A+ S T NV
Sbjct: 209 IFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVV 268
Query: 990 DPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDC 1049
T + + D +++ GR P T LGLE G++ +E G V V+ + T + +I+A+GD
Sbjct: 269 -LTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDV 327
>pdb|4EQW|A Chain A, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
pdb|4EQW|B Chain B, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
Length = 437
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 907 EETIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFK 966
++ +V G +SL+ G T I + I + +D ++ + L K+ + ++
Sbjct: 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILDELDKREIPYR 206
Query: 967 LGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDE 1026
L ++ + G+ IT V+ D ++ VG P ++ +E I+ D
Sbjct: 207 LNEEINAIN--GNEITFKSGKVE--------HYDMIIEGVGTHP--NSKFIESSNIKLDR 254
Query: 1027 KGRVPVNSRFQTVIPNIFAIGDC 1049
KG +PVN +F+T +PNI+AIGD
Sbjct: 255 KGFIPVNDKFETNVPNIYAIGDI 277
>pdb|2AAQ|A Chain A, Crystal Structure Analysis Of The Human Glutahione
Reductase, Complexed With Gopi
Length = 479
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 35/248 (14%)
Query: 827 KLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKT 886
K N + + A V L + + + + GH T T+ + S ++
Sbjct: 94 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTI---EVSGKKYTA 150
Query: 887 KNILIATGS-EVTP----FPGIEVDEETIVSSTGALSLKKGSVWGR---LGAEVTAIEFM 938
+ILIATG TP PG + ++S G L++ + GR +GA A+E
Sbjct: 151 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEE--LPGRSVIVGAGYIAVEMA 204
Query: 939 NAIGGMG---------------IDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITV 983
+ +G D ++ L G++ ++V K+ + V
Sbjct: 205 GILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEV 264
Query: 984 TIENV---KDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVI 1040
++ + P D LL +GR P T +L L ++GI+ D+KG + V+ T +
Sbjct: 265 SMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNV 324
Query: 1041 PNIFAIGD 1048
I+A+GD
Sbjct: 325 KGIYAVGD 332
Score = 37.4 bits (85), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 531 VEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAH 563
V ++ LGGTC+NVGC+P K + N + + H
Sbjct: 49 VVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMH 81
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 462 FAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVAR 521
F A T T +K++ +KV+G+H+ G E++ +A++ GA+ D
Sbjct: 404 FTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDN 463
Query: 522 TCHAHPT 528
T HPT
Sbjct: 464 TVAIHPT 470
>pdb|3DJG|X Chain X, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
Length = 477
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 35/248 (14%)
Query: 827 KLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKT 886
K N + + A V L + + + + GH T T+ + S ++
Sbjct: 92 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTI---EVSGKKYTA 148
Query: 887 KNILIATGS-EVTP----FPGIEVDEETIVSSTGALSLKKGSVWGR---LGAEVTAIEFM 938
+ILIATG TP PG + ++S G L++ + GR +GA A+E
Sbjct: 149 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEE--LPGRSVIVGAGYIAVEMA 202
Query: 939 NAIGGMG---------------IDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITV 983
+ +G D ++ L G++ ++V K+ + V
Sbjct: 203 GILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEV 262
Query: 984 TIENV---KDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVI 1040
++ + P D LL +GR P T +L L ++GI+ D+KG + V+ T +
Sbjct: 263 SMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNV 322
Query: 1041 PNIFAIGD 1048
I+A+GD
Sbjct: 323 KGIYAVGD 330
Score = 37.4 bits (85), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 531 VEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAH 563
V ++ LGGTC+NVGC+P K + N + + H
Sbjct: 47 VVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMH 79
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 462 FAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVAR 521
F A T T +K++ +KV+G+H+ G E++ +A++ GA+ D
Sbjct: 402 FTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDN 461
Query: 522 TCHAHPT 528
T HPT
Sbjct: 462 TVAIHPT 468
>pdb|1BWC|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Ajoene Inhibitor And Subversive Substrate
pdb|2GH5|A Chain A, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|2GH5|B Chain B, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|1GRA|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase As
Derived From Refined Enzyme: Substrate Crystal Structures
At 2 Angstroms Resolution
pdb|1GRB|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase As
Derived From Refined Enzyme: Substrate Crystal Structures
At 2 Angstroms Resolution
pdb|1GRE|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase As
Derived From Refined Enzyme: Substrate Crystal Structures
At 2 Angstroms Resolution
pdb|1GRF|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase As
Derived From Refined Enzyme: Substrate Crystal Structures
At 2 Angstroms Resolution
pdb|3GRS|A Chain A, Refined Structure Of Glutathione Reductase At 1.54 Angstroms
Resolution
pdb|4GR1|A Chain A, The Binding Of The Retro-analogue Of Glutathione Disulfide
To Glutathione Reductase
pdb|3DJJ|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK4|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK8|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK9|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|1GRH|A Chain A, Inhibition Of Human Glutathione Reductase By The Nitrosourea
Drugs 1, 3-Bis(2-Chloroethyl)-1-Nitrosourea And
1-(2-Chloroethyl)-3-(2- Hydroxyethyl)-1-Nitrosourea
pdb|3SQP|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
pdb|3SQP|B Chain B, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
Length = 478
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 35/248 (14%)
Query: 827 KLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKT 886
K N + + A V L + + + + GH T T+ + S ++
Sbjct: 93 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTI---EVSGKKYTA 149
Query: 887 KNILIATGS-EVTP----FPGIEVDEETIVSSTGALSLKKGSVWGR---LGAEVTAIEFM 938
+ILIATG TP PG + ++S G L++ + GR +GA A+E
Sbjct: 150 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEE--LPGRSVIVGAGYIAVEMA 203
Query: 939 NAIGGMG---------------IDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITV 983
+ +G D ++ L G++ ++V K+ + V
Sbjct: 204 GILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEV 263
Query: 984 TIENV---KDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVI 1040
++ + P D LL +GR P T +L L ++GI+ D+KG + V+ T +
Sbjct: 264 SMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNV 323
Query: 1041 PNIFAIGD 1048
I+A+GD
Sbjct: 324 KGIYAVGD 331
Score = 37.4 bits (85), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 531 VEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAH 563
V ++ LGGTC+NVGC+P K + N + + H
Sbjct: 48 VVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMH 80
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 462 FAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVAR 521
F A T T +K++ +KV+G+H+ G E++ +A++ GA+ D
Sbjct: 403 FTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDN 462
Query: 522 TCHAHPT 528
T HPT
Sbjct: 463 TVAIHPT 469
>pdb|1GXF|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
pdb|1GXF|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
Length = 492
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 31/234 (13%)
Query: 862 GHGKITGPNTVTVIKSDGSTEEVK----TKNILIATGS--EVTPFPGIEVDEETIVSSTG 915
G G + N V V +S VK T++IL+A+GS + PGIE +SS
Sbjct: 126 GWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPHMPNIPGIE----HCISSNE 181
Query: 916 ALSLKKGSVWG-RLGAEVTAIEFMNAIGGMGI-DGEVAKQFQRILGKQGMQFKLGTKVTG 973
A L + +G ++EF DG+V ++ + +G L ++T
Sbjct: 182 AFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREELTK 241
Query: 974 ASKSGDNITVTIENVKDPTKKE---------------ELSCDALLVCVGRRPYTHNLGLE 1018
+ +T EN P K E ++ D +++ +GR P T +L L+
Sbjct: 242 QLTANGIQILTKEN---PAKVELNADGSKSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQ 298
Query: 1019 EIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAG 1072
G+ + G V V+ +T + NI+AIGD + ML A +E V+ + G
Sbjct: 299 NAGV-MIKNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVFG 351
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 485 LTDKVLGVHIIGPAAGEL---INEAVLAMEYGASCEDVARTCHAHPTVCVEKNDTLGGTC 541
+ K+ + +IG +G L N A L + A + + H P LGGTC
Sbjct: 1 MMSKIFDLVVIGAGSGGLEAAWNAATLYKKRVAVID--VQMVHGPPFF-----SALGGTC 53
Query: 542 LNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLE--TMMGTKSAAVKALTGGI 599
+NVGC+P K ++ + Y M H + G E + L E ++ K AV +
Sbjct: 54 VNVGCVPKKLMVTGAQY--MEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLNINKSY 111
Query: 600 AHLFK 604
+F+
Sbjct: 112 DEMFR 116
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 479 KVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPT 528
K++ + VLGVH++G A E+I + ++ A D T HPT
Sbjct: 414 KIITNHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVHPT 463
>pdb|1GRG|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase As
Derived From Refined Enzyme: Substrate Crystal Structures
At 2 Angstroms Resolution
Length = 478
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 35/248 (14%)
Query: 827 KLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKT 886
K N + + A V L + + + + GH T T+ + S ++
Sbjct: 93 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTI---EVSGKKYTA 149
Query: 887 KNILIATGS-EVTP----FPGIEVDEETIVSSTGALSLKKGSVWGR---LGAEVTAIEFM 938
+ILIATG TP PG + ++S G L++ + GR +GA A+E
Sbjct: 150 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEE--LPGRSVIVGAGYIAVEMA 203
Query: 939 NAIGGMG---------------IDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITV 983
+ +G D ++ L G++ ++V K+ + V
Sbjct: 204 GILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEV 263
Query: 984 TIENV---KDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVI 1040
++ + P D LL +GR P T +L L ++GI+ D+KG + V+ T +
Sbjct: 264 SMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNV 323
Query: 1041 PNIFAIGD 1048
I+A+GD
Sbjct: 324 KGIYAVGD 331
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 531 VEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAH 563
V ++ LGGT +NVGC+P K + N + + H
Sbjct: 48 VVESHKLGGTXVNVGCVPKKVMWNTAVHSEFMH 80
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 462 FAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVAR 521
F A T T +K++ +KV+G+H+ G E++ +A++ GA+ D
Sbjct: 403 FTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDN 462
Query: 522 TCHAHPT 528
T HPT
Sbjct: 463 TVAIHPT 469
>pdb|1GSN|A Chain A, Human Glutathione Reductase Modified By Dinitrosoglutathione
Length = 478
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 35/248 (14%)
Query: 827 KLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKT 886
K N + + A V L + + + + GH T T+ + S ++
Sbjct: 93 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTI---EVSGKKYTA 149
Query: 887 KNILIATGS-EVTP----FPGIEVDEETIVSSTGALSLKKGSVWGR---LGAEVTAIEFM 938
+ILIATG TP PG + ++S G L++ + GR +GA A+E
Sbjct: 150 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEE--LPGRSVIVGAGYIAVEMA 203
Query: 939 NAIGGMG---------------IDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITV 983
+ +G D ++ L G++ ++V K+ + V
Sbjct: 204 GILSALGSKTSLMIRHDKVLRSFDSMISTNXTEELENAGVEVLKFSQVKEVKKTLSGLEV 263
Query: 984 TIENV---KDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVI 1040
++ + P D LL +GR P T +L L ++GI+ D+KG + V+ T +
Sbjct: 264 SMVTAVPGRLPVMTMIPDVDXLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNV 323
Query: 1041 PNIFAIGD 1048
I+A+GD
Sbjct: 324 KGIYAVGD 331
Score = 33.1 bits (74), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 462 FAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVAR 521
F A T T +K++ +KV+G+H+ G E++ +A++ GA+ D
Sbjct: 403 FTPMYHAVTKRKTKCVMKMVXANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDN 462
Query: 522 TCHAHPT 528
T HPT
Sbjct: 463 TVAIHPT 469
Score = 33.1 bits (74), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 530 CVEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAH 563
V ++ LGGTC+NVG +P K + N + + H
Sbjct: 47 AVVESHKLGGTCVNVGXVPKKVMWNTAVHSEFMH 80
>pdb|1DNC|A Chain A, Human Glutathione Reductase Modified By
Diglutathione-Dinitroso-Iron
Length = 478
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 35/248 (14%)
Query: 827 KLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKT 886
K N + + A V L + + + + GH T T+ + S ++
Sbjct: 93 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTI---EVSGKKYTA 149
Query: 887 KNILIATGS-EVTP----FPGIEVDEETIVSSTGALSLKKGSVWGR---LGAEVTAIEFM 938
+ILIATG TP PG + ++S G L++ + GR +GA A+E
Sbjct: 150 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEE--LPGRSVIVGAGYIAVEMA 203
Query: 939 NAIGGMG---------------IDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITV 983
+ +G D ++ L G++ ++V K+ + V
Sbjct: 204 GILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEV 263
Query: 984 TIENV---KDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVI 1040
++ + P D LL +GR P T +L L ++GI+ D+KG + V+ T +
Sbjct: 264 SMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNV 323
Query: 1041 PNIFAIGD 1048
I+A+GD
Sbjct: 324 KGIYAVGD 331
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 531 VEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAH 563
V ++ LGGTC+NVG +P K + N + + H
Sbjct: 48 VVESHKLGGTCVNVGXVPKKVMWNTAVHSEFMH 80
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 462 FAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVAR 521
F A T T +K++ +KV+G+H+ G E++ +A++ GA+ D
Sbjct: 403 FTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDN 462
Query: 522 TCHAHPT 528
T HPT
Sbjct: 463 TVAIHPT 469
>pdb|1XAN|A Chain A, Human Glutathione Reductase In Complex With A Xanthene
Inhibitor
Length = 461
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 35/248 (14%)
Query: 827 KLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKT 886
K N + + A V L + + + + GH T T+ + S ++
Sbjct: 76 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTI---EVSGKKYTA 132
Query: 887 KNILIATGS-EVTP----FPGIEVDEETIVSSTGALSLKKGSVWGR---LGAEVTAIEFM 938
+ILIATG TP PG + ++S G L++ + GR +GA A+E
Sbjct: 133 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEE--LPGRSVIVGAGYIAVEMA 186
Query: 939 NAIGGMG---------------IDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITV 983
+ +G D ++ L G++ ++V K+ + V
Sbjct: 187 GILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEV 246
Query: 984 TIENV---KDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVI 1040
++ + P D LL +GR P T +L L ++GI+ D+KG + V+ T +
Sbjct: 247 SMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNV 306
Query: 1041 PNIFAIGD 1048
I+A+GD
Sbjct: 307 KGIYAVGD 314
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 531 VEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAH 563
V ++ LGGTC+NVGC+P K + N + + H
Sbjct: 31 VVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMH 63
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 462 FAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVAR 521
F A T T +K++ +KV+G+H+ G E++ +A++ GA+ D
Sbjct: 386 FTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDN 445
Query: 522 TCHAHPT 528
T HPT
Sbjct: 446 TVAIHPT 452
>pdb|1BZL|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
pdb|1BZL|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
Length = 486
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 31/234 (13%)
Query: 862 GHGKITGPNTVTVIKSDGSTEEVK----TKNILIATGS--EVTPFPGIEVDEETIVSSTG 915
G G + N V V +S VK T++IL+A+GS + PGIE +SS
Sbjct: 125 GWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPHMPNIPGIE----HCISSNE 180
Query: 916 ALSLKKGSVWG-RLGAEVTAIEFMNAIGGMGI-DGEVAKQFQRILGKQGMQFKLGTKVTG 973
A L + +G ++EF DG+V ++ + +G L ++T
Sbjct: 181 AFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREELTK 240
Query: 974 ASKSGDNITVTIENVKDPTKKE---------------ELSCDALLVCVGRRPYTHNLGLE 1018
+ +T EN P K E ++ D +++ +GR P T +L L+
Sbjct: 241 QLTANGIQILTKEN---PAKVELNADGSKSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQ 297
Query: 1019 EIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAG 1072
G+ + G V V+ +T + NI+AIGD + ML A +E V+ + G
Sbjct: 298 NAGV-MIKNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVFG 350
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 537 LGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLE--TMMGTKSAAVKA 594
LGGTC+NVGC+P K ++ + Y M H + G E + L E ++ K AV
Sbjct: 48 LGGTCVNVGCVPKKLMVTGAQY--MEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLN 105
Query: 595 LTGGIAHLFK 604
+ +F+
Sbjct: 106 INKSYDEMFR 115
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 479 KVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPT 528
K++ + VLGVH++G A E+I + ++ A D T HPT
Sbjct: 413 KIITNHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVHPT 462
>pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT
Length = 478
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 35/248 (14%)
Query: 827 KLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKT 886
K N + + A V L + + + + GH T T+ + S ++
Sbjct: 93 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTI---EVSGKKYTA 149
Query: 887 KNILIATGS-EVTP----FPGIEVDEETIVSSTGALSLKKGSVWGR---LGAEVTAIEFM 938
+ILIATG TP PG + ++S G L++ + GR +GA A+E
Sbjct: 150 PHILIATGGMPSTPHESQIPGASLG----ITSDGFFQLEE--LPGRSVIVGAGYIAVEMA 203
Query: 939 NAIGGMG---------------IDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITV 983
+ +G D ++ L G++ ++V K+ + V
Sbjct: 204 GILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEV 263
Query: 984 TIENV---KDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVI 1040
++ + P D LL +GR P T +L L ++GI+ D+KG + V+ T +
Sbjct: 264 SMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNV 323
Query: 1041 PNIFAIGD 1048
I+A+GD
Sbjct: 324 KGIYAVGD 331
Score = 37.4 bits (85), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 531 VEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAH 563
V ++ LGGTC+NVGC+P K + N + + H
Sbjct: 48 VVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMH 80
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 462 FAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVAR 521
F A T T +K++ +KV+G+H+ G E++ +A++ GA+ D
Sbjct: 403 FTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDN 462
Query: 522 TCHAHPT 528
T HPT
Sbjct: 463 TVAIHPT 469
>pdb|3IWA|A Chain A, Crystal Structure Of A Fad-Dependent Pyridine
Nucleotide-Disulphide Oxidoreductase From Desulfovibrio
Vulgaris
Length = 472
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 992 TKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIH 1051
T K L D +++ G P T + G+E D +G + V++R +T P+IFA GDC+
Sbjct: 240 TDKRTLDADLVILAAGVSPNTQLA--RDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVT 297
Query: 1052 GPML 1055
P L
Sbjct: 298 IPNL 301
>pdb|1AOG|A Chain A, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
pdb|1AOG|B Chain B, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
Length = 485
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 31/234 (13%)
Query: 862 GHGKITGPNTVTVIKSDGSTEEVK----TKNILIATGS--EVTPFPGIEVDEETIVSSTG 915
G G + N V V +S VK T++IL+A+GS + PGIE +SS
Sbjct: 124 GWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPHMPNIPGIE----HCISSNE 179
Query: 916 ALSLKKGSVWG-RLGAEVTAIEFMNAIGGMGI-DGEVAKQFQRILGKQGMQFKLGTKVTG 973
A L + +G ++EF DG+V ++ + +G L ++T
Sbjct: 180 AFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREELTK 239
Query: 974 ASKSGDNITVTIENVKDPTKKE---------------ELSCDALLVCVGRRPYTHNLGLE 1018
+ +T EN P K E ++ D +++ +GR P T +L L+
Sbjct: 240 QLTANGIQILTKEN---PAKVELNADGSKSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQ 296
Query: 1019 EIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAG 1072
G+ + G V V+ +T + NI+AIGD + ML A +E V+ + G
Sbjct: 297 NAGV-MIKNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVFG 349
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 537 LGGTCLNVGCIPSKALLNNSHYYHMAHSGDMKARGIEVEGVKLNLE--TMMGTKSAAVKA 594
LGGTC+NVGC+P K ++ + Y M H + G E + L E ++ K AV
Sbjct: 47 LGGTCVNVGCVPKKLMVTGAQY--MEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLN 104
Query: 595 LTGGIAHLFK 604
+ +F+
Sbjct: 105 INKSYDEMFR 114
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 479 KVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPT 528
K++ + VLGVH++G A E+I + ++ A D T HPT
Sbjct: 412 KIITNHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVHPT 461
>pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Glutathione Complex
pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Trypanothione Complex
pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed
Disulfide Between Trypanothione And The Enzyme
pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant,
Glutathionylspermidine Complex
Length = 461
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 1000 DALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGD 1048
D LL +GR P T +L L ++GI+ D+KG + V+ T + I+A+GD
Sbjct: 266 DCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 314
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 531 VEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAH 563
V ++ LGGTC+NVGC+P K + N + + H
Sbjct: 31 VVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMH 63
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 462 FAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVAR 521
F A T T +K++ +KV+G+H+ G E++ +A++ GA+ D
Sbjct: 386 FTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDN 445
Query: 522 TCHAHPT 528
T HPT
Sbjct: 446 TVAIHPT 452
>pdb|1K4Q|A Chain A, Human Glutathione Reductase Inactivated By Peroxynitrite
Length = 463
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 1000 DALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGD 1048
D LL +GR P T +L L ++GI+ D+KG + V+ T + I+A+GD
Sbjct: 268 DCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 316
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 531 VEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAH 563
V ++ LGGTC+NVGC+P K + N + + H
Sbjct: 31 VVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMH 63
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 462 FAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVAR 521
F A T T +K++ +KV+G+H+ G E++ +A++ GA+ D
Sbjct: 388 FTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDN 447
Query: 522 TCHAHPT 528
T HPT
Sbjct: 448 TVAIHPT 454
>pdb|3NTD|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C531s Mutant
pdb|3NTD|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C531s Mutant
Length = 565
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 55/218 (25%)
Query: 878 DGSTEEVKTKNILIATGSE--VTPFPGIE------------------------VDEETIV 911
DGS + +L++ G+ V P PG++ V+ T+V
Sbjct: 98 DGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVV 157
Query: 912 SSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKV 971
G + L+ LG + T +E + + +D E+A + + QG+ +LGT +
Sbjct: 158 GG-GFIGLEMMESLHHLGIKTTLLELADQVM-TPVDREMAGFAHQAIRDQGVDLRLGTAL 215
Query: 972 TGAS----------KSGDN---------ITVTIENVKDPTKKEELSCDALLVCVGRRPYT 1012
+ S +G++ +++T+ N E L D L++ +G RP T
Sbjct: 216 SEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSN------GELLETDLLIMAIGVRPET 269
Query: 1013 HNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCI 1050
+ G+ E G + VN+ QT P I+A+GD +
Sbjct: 270 QLA--RDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAV 305
>pdb|3NT6|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C43sC531S DOUBLE MUTANT
pdb|3NT6|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C43sC531S DOUBLE MUTANT
Length = 574
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 55/218 (25%)
Query: 878 DGSTEEVKTKNILIATGSE--VTPFPGIE------------------------VDEETIV 911
DGS + +L++ G+ V P PG++ V+ T+V
Sbjct: 98 DGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDXDRILQTIQXNNVEHATVV 157
Query: 912 SSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKV 971
G + L+ LG + T +E + + +D E A + + QG+ +LGT +
Sbjct: 158 GG-GFIGLEXXESLHHLGIKTTLLELADQVX-TPVDREXAGFAHQAIRDQGVDLRLGTAL 215
Query: 972 TGAS----------KSGDN---------ITVTIENVKDPTKKEELSCDALLVCVGRRPYT 1012
+ S +G++ +++T+ N E L D L+ +G RP T
Sbjct: 216 SEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSN------GELLETDLLIXAIGVRPET 269
Query: 1013 HNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCI 1050
+ G+ E G + VN+ QT P I+A+GD +
Sbjct: 270 QLA--RDAGLAIGELGGIKVNAXXQTSDPAIYAVGDAV 305
>pdb|3NTA|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase
pdb|3NTA|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase
Length = 574
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 55/218 (25%)
Query: 878 DGSTEEVKTKNILIATGSE--VTPFPGIE------------------------VDEETIV 911
DGS + +L++ G+ V P PG++ V+ T+V
Sbjct: 98 DGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDXDRILQTIQXNNVEHATVV 157
Query: 912 SSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKV 971
G + L+ LG + T +E + + +D E A + + QG+ +LGT +
Sbjct: 158 GG-GFIGLEXXESLHHLGIKTTLLELADQVX-TPVDREXAGFAHQAIRDQGVDLRLGTAL 215
Query: 972 TGAS----------KSGDN---------ITVTIENVKDPTKKEELSCDALLVCVGRRPYT 1012
+ S +G++ +++T+ N E L D L+ +G RP T
Sbjct: 216 SEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSN------GELLETDLLIXAIGVRPET 269
Query: 1013 HNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCI 1050
+ G+ E G + VN+ QT P I+A+GD +
Sbjct: 270 QLA--RDAGLAIGELGGIKVNAXXQTSDPAIYAVGDAV 305
>pdb|2V3A|A Chain A, Crystal Structure Of Rubredoxin Reductase From Pseudomonas
Aeruginosa.
pdb|2V3B|A Chain A, Crystal Structure Of The Electron Transfer Complex
Rubredoxin - Rubredoxin Reductase From Pseudomonas
Aeruginosa
Length = 384
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 35/192 (18%)
Query: 882 EEVKTKNILIATGSEVTPFPGIEVDEETIVSSTGALS----LKKGSVWGR----LGAEVT 933
EEV+ +++++A G+E P +E D + + L ++ + R LGA +
Sbjct: 98 EEVRYRDLVLAWGAEPIRVP-VEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLI 156
Query: 934 AIEFMNAI--GGMGID--------------GEVAKQFQRILGKQGMQFKLGTKVTGASKS 977
EF N + GG +D AK Q L G++F LG + K+
Sbjct: 157 GCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKA 216
Query: 978 GDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQ 1037
G+ + + + E + CD ++ VG RP T + + + + V+ +
Sbjct: 217 GEGLEAHLSD------GEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG----IVVDRSLR 266
Query: 1038 TVIPNIFAIGDC 1049
T NI+A+GDC
Sbjct: 267 TSHANIYALGDC 278
>pdb|3F8D|A Chain A, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|B Chain B, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|C Chain C, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|D Chain D, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
Length = 323
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 978 GDNIT--VTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSR 1035
GD + V +EN+K KE L+ + + + +G P T + GIE D G + V+
Sbjct: 218 GDKVVKQVVVENLKTGEIKE-LNVNGVFIEIGFDPPTDFA--KSNGIETDTNGYIKVDEW 274
Query: 1036 FQTVIPNIFAIGDC 1049
+T +P +FA GDC
Sbjct: 275 MRTSVPGVFAAGDC 288
>pdb|3F8P|A Chain A, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|B Chain B, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|C Chain C, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|D Chain D, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8R|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
Length = 323
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 978 GDNIT--VTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSR 1035
GD + V +EN+K KE L+ + + + +G P T + GIE D G + V+
Sbjct: 218 GDKVVKQVVVENLKTGEIKE-LNVNGVFIEIGFDPPTDFA--KSNGIETDTNGYIKVDEW 274
Query: 1036 FQTVIPNIFAIGDC 1049
+T +P +FA GDC
Sbjct: 275 MRTSVPGVFAAGDC 288
>pdb|3IC9|A Chain A, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|B Chain B, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|C Chain C, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|D Chain D, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h
Length = 492
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 110/284 (38%), Gaps = 31/284 (10%)
Query: 804 CAAVQANYHLA-TKLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKS-NKVTQLN 861
AA A+YH + T LF D+ + +N + + G + +S ++ ++
Sbjct: 58 IAAADASYHASQTDLFGIQVDR-ISVNGKAVXKRIQTERDRFVGFVVESVESFDEQDKIR 116
Query: 862 GHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGI------------------ 903
G K +T+ V D S +V K I+IATGS +P
Sbjct: 117 GFAKFLDEHTLQV--DDHS--QVIAKRIVIATGSRPN-YPEFLAAAGSRLLTNDNLFELN 171
Query: 904 EVDEETIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGM 963
++ + V G + L+ G RLG V ++ + E K++ +
Sbjct: 172 DLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL--QDEEXKRYAEKTFNEEF 229
Query: 964 QFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIE 1023
F +V + D + V + K K E S +L GR+ LGLE IE
Sbjct: 230 YFDAKARVISTIEKEDAVEVIYFD-KSGQKTTE-SFQYVLAATGRKANVDKLGLENTSIE 287
Query: 1024 KDEKGRVPVNS-RFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVC 1066
D+K + QT + +IF GD + L H+A D+G V
Sbjct: 288 LDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGKVA 331
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 499 AGELINEAVLAMEYGASCEDVARTCHAHP-TVCVEKNDTLGGTCLNVGCIPSKALLNNSH 557
A ++IN V + G + R H V + + G TC VGC PSK L+ +
Sbjct: 3 AXKVINVDVAIIGTGTAGXGAYRAAKKHTDKVVLIEGGAYGTTCARVGCXPSKLLIAAAD 62
Query: 558 YYHMAHSGDMKARGIEVEGVKLN 580
+ A D+ GI+V+ + +N
Sbjct: 63 ASYHASQTDL--FGIQVDRISVN 83
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 30/75 (40%)
Query: 455 YKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGA 514
Y VG+ F R++ G + V D+ + + LG GPAA + + A +
Sbjct: 381 YVVGQVSFEGQGRSRVXGKNKGLLNVYADRTSGEFLGAEXFGPAAEHIGHLLAWARQQQX 440
Query: 515 SCEDVARTCHAHPTV 529
+ + HP +
Sbjct: 441 TVQAXLTXPFYHPVI 455
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 409 YKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPGIEY 455
Y VG+ F R++ G + V D+ + + LG GP E+
Sbjct: 381 YVVGQVSFEGQGRSRVXGKNKGLLNVYADRTSGEFLGAEXFGPAAEH 427
>pdb|3FG2|P Chain P, Crystal Structure Of Ferredoxin Reductase For The Cyp199a2
System From Rhodopseudomonas Palustris
Length = 404
Score = 37.4 bits (85), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 9/143 (6%)
Query: 907 EETIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFK 966
+ +V G + L+ + G EV +E + + E++ F G++
Sbjct: 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMH 202
Query: 967 LGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDE 1026
G + T + GD +T + + L CD ++V VG P N+ +
Sbjct: 203 YGVRATEIAAEGDRVTGVVL-----SDGNTLPCDLVVVGVGVIP---NVEIAAAAGLPTA 254
Query: 1027 KGRVPVNSRFQTVIPNIFAIGDC 1049
G + V+ + T P+I AIGDC
Sbjct: 255 AGII-VDQQLLTSDPHISAIGDC 276
>pdb|1NHS|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 36.6 bits (83), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 910 IVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQ--GMQFKL 967
+V +G + ++ + + G +VT I+ ++ G+ +D K+F +L ++ +
Sbjct: 153 VVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLD----KEFTDVLTEEMEANNITI 208
Query: 968 GTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEK 1027
T T GD ++ V T K D ++V VG RP T L + +E
Sbjct: 209 ATGETVERYEGDG---RVQKVV--TDKNAYDADLVVVAVGVRPNTAWL---KGTLELHPN 260
Query: 1028 GRVPVNSRFQTVIPNIFAIGDC 1049
G + + +T P++FA+GD
Sbjct: 261 GLIKTDEYMRTSEPDVFAVGDA 282
>pdb|3EF6|A Chain A, Crystal Structure Of Toluene 2,3-Dioxygenase Reductase
pdb|4EMI|A Chain A, Toluene Dioxygenase Reductase In Reduced State In Complex
With Nad+
pdb|4EMJ|A Chain A, Complex Between The Reductase And Ferredoxin Components Of
Toluene Dioxygenase
Length = 410
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 42/221 (19%)
Query: 866 ITGP-------NTVTVIKSDGSTEEVKTKNILIATGSEV-------TPFPGI-------- 903
+TGP T T+ DG+T + I+IATGS + PG+
Sbjct: 75 LTGPEVTALDVQTRTISLDDGTT--LSADAIVIATGSRARTMALPGSQLPGVVTLRTYGD 132
Query: 904 -EVDEETIVSST-------GALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQ 955
+V ++ S+T G + + + +LG VT +E + + + + +
Sbjct: 133 VQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLR 192
Query: 956 RILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNL 1015
+L + G+Q +LGT V G S G +E V + D+ L+CVG P
Sbjct: 193 GLLTELGVQVELGTGVVGFSGEGQ-----LEQVM-ASDGRSFVADSALICVGAEPADQL- 245
Query: 1016 GLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLA 1056
+ G+ D V V+ T+ +FA+GD P+ A
Sbjct: 246 -ARQAGLACDRG--VIVDHCGATLAKGVFAVGDVASWPLRA 283
>pdb|1F8W|A Chain A, Crystal Structure Of Nadh Peroxidase Mutant: R303m
Length = 447
Score = 36.6 bits (83), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 910 IVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQ--GMQFKL 967
+V +G + ++ + + G +VT I+ ++ G+ +D K+F +L ++ +
Sbjct: 153 VVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLD----KEFTDVLTEEMEANNITI 208
Query: 968 GTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEK 1027
T T GD ++ V T K D ++V VG RP T L + +E
Sbjct: 209 ATGETVERYEGDG---RVQKVV--TDKNAYDADLVVVAVGVRPNTAWL---KGTLELHPN 260
Query: 1028 GRVPVNSRFQTVIPNIFAIGDC 1049
G + + +T P++FA+GD
Sbjct: 261 GLIKTDEYMRTSEPDVFAVGDA 282
>pdb|1NHR|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 910 IVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQ--GMQFKL 967
+V +G + ++ + + G +VT I+ ++ G+ +D K+F +L ++ +
Sbjct: 153 VVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLD----KEFTDVLTEEMEANNITI 208
Query: 968 GTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEK 1027
T T GD ++ V T K D ++V VG RP T L + +E
Sbjct: 209 ATGETVERYEGDG---RVQKVV--TDKNAYDADLVVVAVGVRPNTAWL---KGTLELHPN 260
Query: 1028 GRVPVNSRFQTVIPNIFAIGDC 1049
G + + +T P++FA+GD
Sbjct: 261 GLIKTDEYMRTSEPDVFAVGDA 282
>pdb|1NHP|A Chain A, Crystallographic Analyses Of Nadh Peroxidase Cys42ala And
Cys42ser Mutants: Active Site Structure, Mechanistic
Implications, And An Unusual Environment Of Arg303
Length = 447
Score = 36.6 bits (83), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 910 IVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQ--GMQFKL 967
+V +G + ++ + + G +VT I+ ++ G+ +D K+F +L ++ +
Sbjct: 153 VVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLD----KEFTDVLTEEMEANNITI 208
Query: 968 GTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEK 1027
T T GD ++ V T K D ++V VG RP T L + +E
Sbjct: 209 ATGETVERYEGDG---RVQKVV--TDKNAYDADLVVVAVGVRPNTAWL---KGTLELHPN 260
Query: 1028 GRVPVNSRFQTVIPNIFAIGDC 1049
G + + +T P++FA+GD
Sbjct: 261 GLIKTDEYMRTSEPDVFAVGDA 282
>pdb|1JOA|A Chain A, Nadh Peroxidase With Cysteine-Sulfenic Acid
pdb|1NPX|A Chain A, Structure Of Nadh Peroxidase From Streptococcus Faecalis
10c1 Refined At 2.16 Angstroms Resolution
pdb|2NPX|A Chain A, Nadh Binding Site And Catalysis Of Nadh Peroxidase
Length = 447
Score = 36.6 bits (83), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 910 IVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQ--GMQFKL 967
+V +G + ++ + + G +VT I+ ++ G+ +D K+F +L ++ +
Sbjct: 153 VVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLD----KEFTDVLTEEMEANNITI 208
Query: 968 GTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEK 1027
T T GD ++ V T K D ++V VG RP T L + +E
Sbjct: 209 ATGETVERYEGDG---RVQKVV--TDKNAYDADLVVVAVGVRPNTAWL---KGTLELHPN 260
Query: 1028 GRVPVNSRFQTVIPNIFAIGDC 1049
G + + +T P++FA+GD
Sbjct: 261 GLIKTDEYMRTSEPDVFAVGDA 282
>pdb|1NHQ|A Chain A, Crystallographic Analyses Of Nadh Peroxidase Cys42ala And
Cys42ser Mutants: Active Site Structure, Mechanistic
Implications, And An Unusual Environment Of Arg303
Length = 447
Score = 36.6 bits (83), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 910 IVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQ--GMQFKL 967
+V +G + ++ + + G +VT I+ ++ G+ +D K+F +L ++ +
Sbjct: 153 VVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLD----KEFTDVLTEEMEANNITI 208
Query: 968 GTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEK 1027
T T GD ++ V T K D ++V VG RP T L + +E
Sbjct: 209 ATGETVERYEGDG---RVQKVV--TDKNAYDADLVVVAVGVRPNTAWL---KGTLELHPN 260
Query: 1028 GRVPVNSRFQTVIPNIFAIGDC 1049
G + + +T P++FA+GD
Sbjct: 261 GLIKTDEYMRTSEPDVFAVGDA 282
>pdb|3ICR|A Chain A, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
pdb|3ICR|B Chain B, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
pdb|3ICS|A Chain A, Crystal Structure Of Partially Reduced Bacillus Anthracis
Coadr-Rhd
pdb|3ICS|B Chain B, Crystal Structure Of Partially Reduced Bacillus Anthracis
Coadr-Rhd
pdb|3ICT|A Chain A, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
pdb|3ICT|B Chain B, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
Length = 588
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Query: 997 LSCDALLVCVGRRPYT---HNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCI 1050
+ D L++ +G +P + GL +G+ +G + VN +FQT P+I+AIGD I
Sbjct: 269 IQTDXLILAIGVQPESSLAKGAGLA-LGV----RGTIKVNEKFQTSDPHIYAIGDAI 320
>pdb|1HYU|A Chain A, Crystal Structure Of Intact Ahpf
Length = 521
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 1001 ALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGP 1053
+ V +G P TH L E +E++ G + ++++ +T + +FA GDC P
Sbjct: 444 GIFVQIGLLPNTHWL---EGALERNRMGEIIIDAKCETSVKGVFAAGDCTTVP 493
>pdb|3LB8|A Chain A, Crystal Structure Of The Covalent Putidaredoxin Reductase-
Putidaredoxin Complex
pdb|3LB8|B Chain B, Crystal Structure Of The Covalent Putidaredoxin Reductase-
Putidaredoxin Complex
Length = 436
Score = 33.5 bits (75), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 950 VAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRR 1009
V+ ++ + + G+ + GT+V G S D VT +D T+ L D ++ +G
Sbjct: 192 VSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTR---LPADLVIAGIGLI 248
Query: 1010 PYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDC 1049
P N L + + G V +N QT P I A+GDC
Sbjct: 249 P---NCELASAAGLQVDNGIV-INEHMQTSDPLIMAVGDC 284
>pdb|1Q1R|A Chain A, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1R|B Chain B, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1W|A Chain A, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1W|B Chain B, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
Length = 431
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 950 VAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRR 1009
V+ ++ + + G+ + GT+V G S D VT +D T+ L D ++ +G
Sbjct: 193 VSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTR---LPADLVIAGIGLI 249
Query: 1010 PYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDC 1049
P N L + + G V +N QT P I A+GDC
Sbjct: 250 P---NCELASAAGLQVDNGIV-INEHMQTSDPLIMAVGDC 285
>pdb|1FL2|A Chain A, Catalytic Core Component Of The Alkylhydroperoxide Reductase
Ahpf From E.Coli
Length = 310
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 952 KQFQRILGKQGMQFKL-GTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRP 1010
K IL Q + K G+KV G D ++ I N+ EL+ + V +G P
Sbjct: 193 KNVDIILNAQTTEVKGDGSKVVGLEYR-DRVSGDIHNI-------ELA--GIFVQIGLLP 242
Query: 1011 YTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGP 1053
T+ L E +E++ G + ++++ +T + +FA GDC P
Sbjct: 243 NTNWL---EGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVP 282
>pdb|3ZYJ|B Chain B, Netring1 In Complex With Ngl1
pdb|3ZYJ|D Chain D, Netring1 In Complex With Ngl1
Length = 426
Score = 30.8 bits (68), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 459 KFPFAANSRAKTNNDTDG---FVKVLGDKLTDKVLGVHIIGPAAGEL-INEAVLAMEYGA 514
+F F A R + G K L D T L + ++ PA GE+ ++E LA + A
Sbjct: 228 RFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYA 287
Query: 515 SCEDVAR---TCHAHPTVCVEKNDTLGGTC 541
+ R C+ H TVCV N L C
Sbjct: 288 ISDIKVRGRCKCNLHATVCVYDNSKLTCEC 317
>pdb|1TRB|A Chain A, Convergent Evolution Of Similar Function In Two Structurally
Divergent Enzymes
Length = 320
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 12/82 (14%)
Query: 977 SGDNITVT---IENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVN 1033
+GD + VT + + ++ E L L V +G P N + E +E E G + V
Sbjct: 211 TGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP---NTAIFEGQLEL-ENGYIKVQ 266
Query: 1034 SRF-----QTVIPNIFAIGDCI 1050
S QT IP +FA GD +
Sbjct: 267 SGIHGNATQTSIPGVFAAGDVM 288
>pdb|1F6M|A Chain A, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|B Chain B, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|E Chain E, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|F Chain F, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
Length = 320
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 12/82 (14%)
Query: 977 SGDNITVT---IENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVN 1033
+GD + VT + + ++ E L L V +G P N + E +E E G + V
Sbjct: 211 TGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP---NTAIFEGQLEL-ENGYIKVQ 266
Query: 1034 SRF-----QTVIPNIFAIGDCI 1050
S QT IP +FA GD +
Sbjct: 267 SGIHGNATQTSIPGVFAAGDVM 288
>pdb|1TDF|A Chain A, Crystal Structure Of Escherichia Coli Thioredoxin Reductase
Refined At 2 Angstrom Resolution: Implications For A
Large Conformational Change During Catalysis
Length = 316
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 12/82 (14%)
Query: 977 SGDNITVT---IENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVN 1033
+GD + VT + + ++ E L L V +G P N + E +E E G + V
Sbjct: 211 TGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP---NTAIFEGQLEL-ENGYIKVQ 266
Query: 1034 SRF-----QTVIPNIFAIGDCI 1050
S QT IP +FA GD +
Sbjct: 267 SGIHGNATQTSIPGVFAAGDVM 288
>pdb|1CL0|A Chain A, Crystal Structure Of Reduced Thioredoxin Reductase From
Escherichia Coli
Length = 320
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 12/82 (14%)
Query: 977 SGDNITVT---IENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVN 1033
+GD + VT + + ++ E L L V +G P N + E +E E G + V
Sbjct: 211 TGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP---NTAIFEGQLEL-ENGYIKVQ 266
Query: 1034 SRF-----QTVIPNIFAIGDCI 1050
S QT IP +FA GD +
Sbjct: 267 SGIHGNATQTSIPGVFAAGDVM 288
>pdb|1TDE|A Chain A, Crystal Structure Of Escherichia Coli Thioredoxin Reductase
Refined At 2 Angstrom Resolution: Implications For A
Large Conformational Change During Catalysis
Length = 316
Score = 30.4 bits (67), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 12/82 (14%)
Query: 977 SGDNITVT---IENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVN 1033
+GD + VT + + ++ E L L V +G P N + E +E E G + V
Sbjct: 211 TGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP---NTAIFEGQLEL-ENGYIKVQ 266
Query: 1034 SRF-----QTVIPNIFAIGDCI 1050
S QT IP +FA GD +
Sbjct: 267 SGIHGNATQTSIPGVFAAGDVM 288
>pdb|3MTJ|A Chain A, The Crystal Structure Of A Homoserine Dehydrogenase From
Thiobacillus Denitrificans To 2.15a
Length = 444
Score = 29.6 bits (65), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 21/122 (17%)
Query: 756 MYAIARRYDQALSLIQTKHVPLSEELADLLVPPESD----------DQRQVVLNTLGNCA 805
+ A R D+A +L +PL+ D++ PE D R++V + N
Sbjct: 47 VRAAVRNLDKAEAL--AGGLPLTTNPFDVVDDPEIDIVVELIGGLEPARELVXQAIANGK 104
Query: 806 -AVQANYHLATK----LFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQL 860
V AN HL K +F A KGV + E + +KAL G+ +N++ L
Sbjct: 105 HVVTANKHLVAKYGNEIFAAAQAKGVXVTFEAAVAGGIPIIKALREGLT----ANRIEWL 160
Query: 861 NG 862
G
Sbjct: 161 AG 162
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,552,181
Number of Sequences: 62578
Number of extensions: 1247783
Number of successful extensions: 3740
Number of sequences better than 100.0: 124
Number of HSP's better than 100.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 3344
Number of HSP's gapped (non-prelim): 347
length of query: 1074
length of database: 14,973,337
effective HSP length: 109
effective length of query: 965
effective length of database: 8,152,335
effective search space: 7867003275
effective search space used: 7867003275
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)