Query psy14927
Match_columns 1074
No_of_seqs 856 out of 4459
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 15:57:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14927.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14927hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3urh_A Dihydrolipoyl dehydroge 100.0 4E-32 1.4E-36 325.7 29.1 278 794-1073 25-363 (491)
2 1zmd_A Dihydrolipoyl dehydroge 100.0 2.3E-31 7.9E-36 317.7 28.1 276 794-1073 6-345 (474)
3 2qae_A Lipoamide, dihydrolipoy 100.0 2E-31 6.8E-36 317.7 26.7 274 795-1073 3-340 (468)
4 1dxl_A Dihydrolipoamide dehydr 100.0 3.5E-31 1.2E-35 316.0 26.7 276 794-1073 6-342 (470)
5 4b1b_A TRXR, thioredoxin reduc 100.0 2.2E-31 7.4E-36 319.1 24.9 270 796-1073 44-384 (542)
6 1v59_A Dihydrolipoamide dehydr 100.0 3.5E-31 1.2E-35 316.5 26.7 278 794-1073 5-350 (478)
7 3lad_A Dihydrolipoamide dehydr 100.0 6.2E-31 2.1E-35 314.2 27.3 275 795-1073 4-343 (476)
8 2eq6_A Pyruvate dehydrogenase 100.0 6.4E-31 2.2E-35 312.7 26.7 270 795-1073 7-334 (464)
9 1ebd_A E3BD, dihydrolipoamide 100.0 1.1E-30 3.7E-35 310.3 28.6 272 795-1073 4-333 (455)
10 2a8x_A Dihydrolipoyl dehydroge 100.0 1.1E-30 3.7E-35 311.0 26.4 272 795-1072 4-333 (464)
11 3dgz_A Thioredoxin reductase 2 100.0 1.2E-30 4E-35 312.5 26.7 277 794-1073 6-352 (488)
12 1ojt_A Surface protein; redox- 100.0 1.1E-30 3.6E-35 312.4 24.6 276 794-1073 6-349 (482)
13 3qfa_A Thioredoxin reductase 1 100.0 2E-30 6.8E-35 312.4 26.8 276 794-1073 32-380 (519)
14 2hqm_A GR, grase, glutathione 100.0 2.4E-30 8.4E-35 308.9 25.6 271 794-1073 11-347 (479)
15 1xdi_A RV3303C-LPDA; reductase 100.0 3.5E-30 1.2E-34 309.3 25.6 268 796-1073 4-342 (499)
16 2wpf_A Trypanothione reductase 100.0 4E-30 1.4E-34 307.9 25.4 269 794-1073 7-355 (495)
17 1fec_A Trypanothione reductase 100.0 5.6E-30 1.9E-34 306.4 26.6 270 795-1073 4-351 (490)
18 1ges_A Glutathione reductase; 100.0 2.7E-30 9.3E-35 306.0 23.1 264 795-1073 5-328 (450)
19 3dk9_A Grase, GR, glutathione 100.0 5.8E-30 2E-34 305.9 25.8 273 794-1073 20-356 (478)
20 3dgh_A TRXR-1, thioredoxin red 100.0 6.7E-30 2.3E-34 305.7 26.1 274 794-1073 9-352 (483)
21 3l8k_A Dihydrolipoyl dehydroge 100.0 4.7E-30 1.6E-34 305.5 24.5 268 795-1073 5-333 (466)
22 2r9z_A Glutathione amide reduc 100.0 5.4E-30 1.9E-34 304.5 24.5 265 795-1073 5-327 (463)
23 2yqu_A 2-oxoglutarate dehydrog 100.0 4.7E-30 1.6E-34 304.8 23.8 268 796-1073 3-327 (455)
24 4dna_A Probable glutathione re 100.0 1.1E-29 3.7E-34 302.3 23.8 266 795-1073 6-331 (463)
25 1zk7_A HGII, reductase, mercur 100.0 3.4E-29 1.1E-33 298.4 27.8 268 794-1073 4-334 (467)
26 4eqs_A Coenzyme A disulfide re 100.0 4E-30 1.4E-34 303.0 19.4 264 796-1073 2-311 (437)
27 3o0h_A Glutathione reductase; 100.0 1.4E-29 4.7E-34 303.0 22.1 267 795-1073 27-351 (484)
28 1lvl_A Dihydrolipoamide dehydr 100.0 3.4E-29 1.2E-33 297.3 23.8 265 794-1073 5-330 (458)
29 1onf_A GR, grase, glutathione 100.0 2.8E-29 9.6E-34 301.3 23.1 268 796-1073 4-371 (500)
30 3ic9_A Dihydrolipoamide dehydr 100.0 4.3E-29 1.5E-33 298.9 24.2 269 795-1072 9-337 (492)
31 4g6h_A Rotenone-insensitive NA 100.0 1.8E-29 6.1E-34 301.8 16.4 277 787-1071 36-397 (502)
32 1mo9_A ORF3; nucleotide bindin 100.0 9.5E-29 3.2E-33 298.2 21.9 265 794-1073 43-378 (523)
33 2x8g_A Thioredoxin glutathione 100.0 2.9E-28 9.9E-33 299.3 26.4 275 794-1073 107-459 (598)
34 3klj_A NAD(FAD)-dependent dehy 100.0 2.1E-29 7.1E-34 291.6 14.8 250 794-1073 9-294 (385)
35 3oc4_A Oxidoreductase, pyridin 100.0 1.7E-28 5.8E-33 291.0 22.9 266 796-1073 4-314 (452)
36 3hyw_A Sulfide-quinone reducta 100.0 2.9E-29 1E-33 295.4 15.8 265 795-1071 3-329 (430)
37 3ef6_A Toluene 1,2-dioxygenase 100.0 2.4E-29 8.2E-34 294.4 14.9 264 796-1073 4-309 (410)
38 3fg2_P Putative rubredoxin red 100.0 3E-28 1E-32 284.6 20.5 264 795-1073 2-310 (404)
39 1xhc_A NADH oxidase /nitrite r 100.0 1.1E-28 3.7E-33 284.1 16.4 255 796-1073 10-297 (367)
40 3lxd_A FAD-dependent pyridine 100.0 4E-28 1.4E-32 284.7 21.3 265 794-1073 9-321 (415)
41 3kd9_A Coenzyme A disulfide re 100.0 7.5E-28 2.6E-32 285.3 21.4 265 795-1073 4-315 (449)
42 3iwa_A FAD-dependent pyridine 100.0 5.8E-28 2E-32 288.1 20.0 269 795-1073 4-329 (472)
43 3ntd_A FAD-dependent pyridine 100.0 8E-28 2.7E-32 293.8 20.2 267 796-1073 3-338 (565)
44 2cdu_A NADPH oxidase; flavoenz 100.0 1.9E-27 6.4E-32 282.1 22.2 266 796-1073 2-317 (452)
45 2gqw_A Ferredoxin reductase; f 99.9 8.7E-28 3E-32 280.9 18.1 258 794-1073 7-308 (408)
46 2bc0_A NADH oxidase; flavoprot 99.9 2.5E-27 8.5E-32 283.7 21.4 269 795-1073 36-361 (490)
47 3f8d_A Thioredoxin reductase ( 99.9 2.6E-27 8.8E-32 267.4 20.3 265 794-1071 15-313 (323)
48 2v3a_A Rubredoxin reductase; a 99.9 1.9E-27 6.6E-32 275.9 19.4 262 795-1073 5-306 (384)
49 1q1r_A Putidaredoxin reductase 99.9 9.4E-28 3.2E-32 282.5 16.4 266 795-1073 5-319 (431)
50 3r9u_A Thioredoxin reductase; 99.9 6.1E-27 2.1E-31 263.4 21.2 267 794-1071 4-308 (315)
51 1nhp_A NADH peroxidase; oxidor 99.9 8.7E-27 3E-31 276.0 21.8 266 796-1073 2-316 (447)
52 2q7v_A Thioredoxin reductase; 99.9 1.1E-26 3.7E-31 263.2 21.7 265 794-1072 8-309 (325)
53 3ics_A Coenzyme A-disulfide re 99.9 6.1E-27 2.1E-31 287.0 20.6 267 794-1072 36-352 (588)
54 3cgb_A Pyridine nucleotide-dis 99.9 1.3E-26 4.3E-31 276.9 22.8 267 795-1073 37-353 (480)
55 4gcm_A TRXR, thioredoxin reduc 99.9 2.1E-26 7.3E-31 259.2 21.6 264 795-1071 7-302 (312)
56 3itj_A Thioredoxin reductase 1 99.9 5.4E-27 1.9E-31 266.6 16.7 266 793-1071 21-331 (338)
57 1fl2_A Alkyl hydroperoxide red 99.9 2.1E-26 7.2E-31 258.8 21.1 262 796-1072 3-302 (310)
58 3lzw_A Ferredoxin--NADP reduct 99.9 5.8E-27 2E-31 265.7 16.1 264 794-1071 7-311 (332)
59 4fk1_A Putative thioredoxin re 99.9 7.4E-27 2.5E-31 262.1 16.6 257 794-1071 6-296 (304)
60 4a5l_A Thioredoxin reductase; 99.9 1.8E-26 6.2E-31 259.8 19.5 262 795-1071 5-308 (314)
61 3vrd_B FCCB subunit, flavocyto 99.9 1.2E-27 4.2E-32 279.3 10.0 263 795-1071 3-320 (401)
62 3cty_A Thioredoxin reductase; 99.9 4.8E-26 1.6E-30 257.2 22.6 263 794-1071 16-312 (319)
63 2q0l_A TRXR, thioredoxin reduc 99.9 5.7E-26 2E-30 255.4 22.5 263 796-1072 3-306 (311)
64 3sx6_A Sulfide-quinone reducta 99.9 3.7E-26 1.3E-30 269.7 21.5 266 795-1071 5-340 (437)
65 2zbw_A Thioredoxin reductase; 99.9 5.7E-26 2E-30 258.3 21.0 270 794-1072 5-314 (335)
66 3fbs_A Oxidoreductase; structu 99.9 2.6E-26 8.9E-31 256.0 16.5 253 796-1071 4-288 (297)
67 1trb_A Thioredoxin reductase; 99.9 6.5E-26 2.2E-30 256.0 19.7 265 794-1071 5-310 (320)
68 1vdc_A NTR, NADPH dependent th 99.9 2.3E-25 7.8E-30 253.1 20.5 265 794-1071 8-319 (333)
69 2a87_A TRXR, TR, thioredoxin r 99.9 1.3E-25 4.3E-30 255.6 17.9 264 794-1071 14-312 (335)
70 3h28_A Sulfide-quinone reducta 99.9 1.2E-25 4.1E-30 264.8 17.1 262 795-1071 3-329 (430)
71 1hyu_A AHPF, alkyl hydroperoxi 99.9 4.9E-25 1.7E-29 265.3 22.0 262 795-1071 213-512 (521)
72 3ab1_A Ferredoxin--NADP reduct 99.9 3E-25 1E-29 255.2 19.0 269 794-1072 14-325 (360)
73 2vdc_G Glutamate synthase [NAD 99.9 3.2E-26 1.1E-30 270.0 9.7 263 794-1072 122-441 (456)
74 1m6i_A Programmed cell death p 99.9 1.5E-25 5.1E-30 268.1 15.4 269 794-1073 11-352 (493)
75 3h8l_A NADH oxidase; membrane 99.9 1.2E-25 4E-30 263.3 12.0 261 796-1072 3-333 (409)
76 3d1c_A Flavin-containing putat 99.9 3.5E-23 1.2E-27 238.4 18.1 261 795-1072 5-336 (369)
77 1gte_A Dihydropyrimidine dehyd 99.9 5.2E-24 1.8E-28 275.0 10.4 263 794-1072 187-505 (1025)
78 4a9w_A Monooxygenase; baeyer-v 99.9 3.7E-23 1.3E-27 236.6 15.2 260 795-1072 4-349 (357)
79 1cjc_A Protein (adrenodoxin re 99.9 6.7E-23 2.3E-27 242.4 11.3 263 794-1072 6-392 (460)
80 1lqt_A FPRA; NADP+ derivative, 99.9 1.9E-22 6.4E-27 238.3 9.5 259 795-1072 4-384 (456)
81 3k30_A Histamine dehydrogenase 99.9 3.2E-22 1.1E-26 248.9 10.8 247 794-1073 391-673 (690)
82 2gag_A Heterotetrameric sarcos 99.9 2.6E-21 8.8E-26 248.1 17.4 256 794-1072 128-441 (965)
83 1o94_A Tmadh, trimethylamine d 99.9 3.3E-22 1.1E-26 249.8 8.7 251 794-1072 389-697 (729)
84 1xi4_A Clathrin heavy chain; a 99.9 2.1E-18 7.1E-23 216.6 42.0 228 5-282 1058-1310(1630)
85 2xve_A Flavin-containing monoo 99.8 4.9E-21 1.7E-25 227.2 17.2 250 796-1073 4-339 (464)
86 1y56_A Hypothetical protein PH 99.8 2E-21 6.9E-26 232.3 8.7 253 794-1072 108-374 (493)
87 1ps9_A 2,4-dienoyl-COA reducta 99.8 1.7E-20 5.7E-25 232.9 13.9 235 794-1070 373-671 (671)
88 3s5w_A L-ornithine 5-monooxyge 99.8 6.7E-20 2.3E-24 217.9 18.3 271 794-1070 30-444 (463)
89 2gv8_A Monooxygenase; FMO, FAD 99.8 5.2E-19 1.8E-23 209.2 14.6 252 795-1073 7-360 (447)
90 1xi4_A Clathrin heavy chain; a 99.7 7E-16 2.4E-20 194.0 28.4 252 5-277 1114-1454(1630)
91 3gwf_A Cyclohexanone monooxyge 99.7 2.5E-16 8.4E-21 189.7 13.0 266 794-1071 8-453 (540)
92 3urh_A Dihydrolipoyl dehydroge 99.6 2.9E-16 1E-20 187.8 11.3 158 368-534 313-478 (491)
93 3lad_A Dihydrolipoamide dehydr 99.6 3.7E-16 1.2E-20 186.3 9.6 157 369-534 294-458 (476)
94 4dna_A Probable glutathione re 99.6 6.8E-16 2.3E-20 183.2 11.5 160 369-537 282-450 (463)
95 2ywl_A Thioredoxin reductase r 99.6 2.6E-15 8.9E-20 154.2 12.3 138 922-1072 17-168 (180)
96 3o0h_A Glutathione reductase; 99.6 1.9E-15 6.5E-20 180.4 11.2 161 368-537 301-470 (484)
97 3uox_A Otemo; baeyer-villiger 99.6 2.3E-15 7.7E-20 181.5 11.9 146 794-941 9-220 (545)
98 3l8k_A Dihydrolipoyl dehydroge 99.6 1.6E-15 5.4E-20 180.2 10.1 155 369-533 285-450 (466)
99 3dk9_A Grase, GR, glutathione 99.6 2.1E-15 7.3E-20 179.7 10.7 157 369-534 307-475 (478)
100 1ojt_A Surface protein; redox- 99.5 6.5E-15 2.2E-19 175.7 10.9 156 369-533 300-463 (482)
101 3ic9_A Dihydrolipoamide dehydr 99.5 4.4E-15 1.5E-19 177.4 8.7 156 369-533 288-459 (492)
102 4b1b_A TRXR, thioredoxin reduc 99.5 3.7E-15 1.3E-19 178.5 7.1 155 373-536 338-520 (542)
103 4ap3_A Steroid monooxygenase; 99.5 2.5E-14 8.4E-19 172.6 14.2 146 794-941 21-226 (549)
104 1ebd_A E3BD, dihydrolipoamide 99.5 1.4E-14 4.8E-19 171.5 11.0 156 369-533 284-447 (455)
105 1w4x_A Phenylacetone monooxyge 99.5 2.2E-14 7.6E-19 173.4 11.3 262 794-1071 16-462 (542)
106 2a8x_A Dihydrolipoyl dehydroge 99.5 2E-14 6.9E-19 170.6 9.5 156 369-533 285-450 (464)
107 1zmd_A Dihydrolipoyl dehydroge 99.5 2.1E-14 7.1E-19 171.0 9.5 156 369-533 296-459 (474)
108 1dxl_A Dihydrolipoamide dehydr 99.5 2.5E-14 8.4E-19 170.2 10.1 156 369-533 293-456 (470)
109 3qfa_A Thioredoxin reductase 1 99.5 3.8E-14 1.3E-18 170.4 11.5 167 371-546 332-517 (519)
110 2qae_A Lipoamide, dihydrolipoy 99.5 2.9E-14 1E-18 169.4 10.3 156 369-533 290-454 (468)
111 2eq6_A Pyruvate dehydrogenase 99.5 3.2E-14 1.1E-18 168.8 10.6 156 369-534 285-448 (464)
112 2wpf_A Trypanothione reductase 99.5 4.8E-14 1.6E-18 168.5 11.7 160 369-537 306-475 (495)
113 1xdi_A RV3303C-LPDA; reductase 99.5 3.2E-14 1.1E-18 170.5 10.1 156 369-533 293-457 (499)
114 2hqm_A GR, grase, glutathione 99.5 6E-14 2E-18 167.1 11.8 158 369-535 298-469 (479)
115 1mo9_A ORF3; nucleotide bindin 99.5 3E-14 1E-18 171.5 9.1 158 369-535 329-512 (523)
116 1fec_A Trypanothione reductase 99.5 5.7E-14 1.9E-18 167.7 11.5 160 369-537 302-471 (490)
117 1ges_A Glutathione reductase; 99.5 5.8E-14 2E-18 165.9 10.4 157 369-534 279-447 (450)
118 3dgh_A TRXR-1, thioredoxin red 99.5 9.5E-14 3.2E-18 165.7 10.4 156 369-534 303-472 (483)
119 1v59_A Dihydrolipoamide dehydr 99.5 9.5E-14 3.3E-18 165.5 10.2 156 369-533 301-464 (478)
120 3dgz_A Thioredoxin reductase 2 99.4 7.5E-14 2.6E-18 166.7 8.8 158 369-535 301-473 (488)
121 2r9z_A Glutathione amide reduc 99.4 1.4E-13 4.7E-18 163.2 10.8 158 369-535 278-446 (463)
122 1lvl_A Dihydrolipoamide dehydr 99.4 1.6E-13 5.5E-18 162.4 10.1 154 370-533 283-444 (458)
123 1zk7_A HGII, reductase, mercur 99.4 1.9E-13 6.6E-18 162.3 10.2 158 369-535 285-450 (467)
124 2yqu_A 2-oxoglutarate dehydrog 99.4 3.6E-13 1.2E-17 159.4 9.5 155 370-533 279-441 (455)
125 3oc4_A Oxidoreductase, pyridin 99.4 7.1E-13 2.4E-17 156.7 11.6 153 368-533 254-428 (452)
126 4eqs_A Coenzyme A disulfide re 99.4 9E-13 3.1E-17 154.9 10.5 153 369-533 252-426 (437)
127 1onf_A GR, grase, glutathione 99.4 1.1E-12 3.8E-17 156.9 10.8 155 371-534 290-493 (500)
128 3kd9_A Coenzyme A disulfide re 99.4 9.3E-13 3.2E-17 155.6 9.8 154 369-533 256-430 (449)
129 3iwa_A FAD-dependent pyridine 99.3 1.2E-12 3.9E-17 155.8 8.5 153 369-533 270-447 (472)
130 2x8g_A Thioredoxin glutathione 99.3 5.7E-12 1.9E-16 154.4 10.7 158 369-535 409-580 (598)
131 2e5v_A L-aspartate oxidase; ar 99.3 1.2E-12 4E-17 155.3 3.9 201 845-1072 122-370 (472)
132 4b63_A L-ornithine N5 monooxyg 99.2 4E-10 1.4E-14 134.6 20.0 228 843-1072 146-484 (501)
133 3ics_A Coenzyme A-disulfide re 99.2 2.5E-11 8.4E-16 148.4 9.1 153 369-532 294-469 (588)
134 1nhp_A NADH peroxidase; oxidor 99.2 2.3E-11 7.9E-16 143.5 8.1 154 369-533 257-432 (447)
135 2cdu_A NADPH oxidase; flavoenz 99.2 3.8E-11 1.3E-15 141.8 9.0 154 369-533 258-433 (452)
136 3cgb_A Pyridine nucleotide-dis 99.1 5.8E-11 2E-15 141.3 10.3 154 369-533 294-469 (480)
137 3ntd_A FAD-dependent pyridine 99.1 4.3E-11 1.5E-15 145.6 8.5 154 369-533 279-454 (565)
138 2bc0_A NADH oxidase; flavoprot 99.1 6.4E-11 2.2E-15 141.3 8.4 154 369-533 302-478 (490)
139 1b89_A Protein (clathrin heavy 99.1 3.7E-09 1.3E-13 121.3 21.6 246 5-273 70-364 (449)
140 3mkq_A Coatomer beta'-subunit; 99.1 4E-10 1.4E-14 142.7 12.5 154 11-174 631-799 (814)
141 1b89_A Protein (clathrin heavy 99.0 2.3E-09 8E-14 122.9 15.2 206 37-282 19-237 (449)
142 1w3b_A UDP-N-acetylglucosamine 99.0 1.9E-07 6.6E-12 106.9 29.7 309 5-354 8-373 (388)
143 2xpi_A Anaphase-promoting comp 98.9 6.8E-07 2.3E-11 108.5 34.2 321 6-354 127-584 (597)
144 3mkq_B Coatomer subunit alpha; 98.9 1.2E-08 3.9E-13 101.8 12.6 121 35-158 19-142 (177)
145 2xpi_A Anaphase-promoting comp 98.9 3.8E-06 1.3E-10 101.8 37.8 310 50-368 117-562 (597)
146 3ro2_A PINS homolog, G-protein 98.8 1.8E-06 6.2E-11 95.1 29.7 272 5-350 14-336 (338)
147 4a1s_A PINS, partner of inscut 98.8 5.3E-07 1.8E-11 103.8 26.3 273 6-352 58-378 (411)
148 3fpz_A Thiazole biosynthetic e 98.8 3.5E-12 1.2E-16 143.9 -17.4 221 795-1071 66-321 (326)
149 3sf4_A G-protein-signaling mod 98.8 3.5E-06 1.2E-10 96.2 31.6 274 5-352 18-342 (406)
150 2gqf_A Hypothetical protein HI 98.8 2.8E-09 9.6E-14 123.4 5.5 100 795-897 5-168 (401)
151 1w3b_A UDP-N-acetylglucosamine 98.7 9.9E-07 3.4E-11 100.9 24.8 273 6-301 43-367 (388)
152 2gw1_A Mitochondrial precursor 98.7 2.6E-06 9E-11 100.7 28.3 309 5-347 15-479 (514)
153 3ieg_A DNAJ homolog subfamily 98.7 8.7E-06 3E-10 90.8 31.0 126 5-130 12-179 (359)
154 2cul_A Glucose-inhibited divis 98.7 2.6E-08 8.7E-13 106.3 8.9 143 922-1072 19-229 (232)
155 2y4t_A DNAJ homolog subfamily 98.7 1.4E-05 4.7E-10 93.0 32.8 127 5-131 35-203 (450)
156 3fp2_A TPR repeat-containing p 98.7 4.6E-06 1.6E-10 99.4 28.8 315 5-352 34-497 (537)
157 2xm6_A Protein corresponding t 98.6 1.8E-05 6.1E-10 93.9 31.4 311 9-347 56-433 (490)
158 3mkq_A Coatomer beta'-subunit; 98.6 1E-06 3.4E-11 111.4 20.7 177 35-246 613-793 (814)
159 2y4t_A DNAJ homolog subfamily 98.6 1.6E-05 5.4E-10 92.4 28.4 281 46-369 22-342 (450)
160 3ieg_A DNAJ homolog subfamily 98.6 2E-05 6.8E-10 87.8 28.1 85 49-133 2-99 (359)
161 3ces_A MNMG, tRNA uridine 5-ca 98.5 3E-07 1E-11 110.7 12.3 139 794-936 28-220 (651)
162 3ulq_A Response regulator aspa 98.5 1.8E-05 6.3E-10 90.3 27.0 232 7-307 114-373 (383)
163 3k7m_X 6-hydroxy-L-nicotine ox 98.5 2.2E-08 7.4E-13 117.3 1.0 94 950-1051 206-307 (431)
164 3u4t_A TPR repeat-containing p 98.5 1.7E-05 5.9E-10 85.2 23.7 110 5-134 12-137 (272)
165 3q15_A PSP28, response regulat 98.5 5.5E-05 1.9E-09 86.2 29.1 228 53-305 104-368 (378)
166 1fch_A Peroxisomal targeting s 98.4 4.3E-06 1.5E-10 94.3 18.0 300 10-344 15-357 (368)
167 2zxi_A TRNA uridine 5-carboxym 98.4 2.9E-06 1E-10 101.8 16.5 102 795-898 28-181 (637)
168 2ifu_A Gamma-SNAP; membrane fu 98.4 3.8E-05 1.3E-09 85.1 24.4 227 62-352 3-229 (307)
169 3fp2_A TPR repeat-containing p 98.4 4.3E-05 1.5E-09 90.9 26.6 80 50-129 25-117 (537)
170 2gw1_A Mitochondrial precursor 98.4 2.4E-05 8.2E-10 92.3 23.9 81 51-131 7-99 (514)
171 3ulq_A Response regulator aspa 98.4 8.5E-05 2.9E-09 84.7 27.2 236 56-350 109-372 (383)
172 3sf4_A G-protein-signaling mod 98.3 0.00014 4.8E-09 82.6 28.5 248 51-352 10-302 (406)
173 3hym_B Cell division cycle pro 98.3 1E-05 3.5E-10 89.3 18.3 127 5-131 31-185 (330)
174 3ro2_A PINS homolog, G-protein 98.3 0.00017 5.9E-09 79.0 28.0 247 52-352 7-298 (338)
175 4a1s_A PINS, partner of inscut 98.3 7.6E-05 2.6E-09 85.5 25.9 247 52-352 50-338 (411)
176 4eqf_A PEX5-related protein; a 98.3 2.2E-05 7.7E-10 88.6 20.6 66 275-342 284-352 (365)
177 3hym_B Cell division cycle pro 98.3 4.2E-05 1.4E-09 84.3 22.2 86 47-132 19-118 (330)
178 2xm6_A Protein corresponding t 98.3 0.0001 3.6E-09 87.2 27.0 16 331-346 381-396 (490)
179 2pl2_A Hypothetical conserved 98.2 1.1E-05 3.7E-10 84.5 14.8 22 5-26 14-35 (217)
180 3edt_B KLC 2, kinesin light ch 98.2 4.5E-05 1.5E-09 81.7 19.2 248 8-301 13-280 (283)
181 2ywl_A Thioredoxin reductase r 98.2 8.4E-07 2.9E-11 90.3 4.7 97 796-897 3-110 (180)
182 3cv0_A Peroxisome targeting si 98.2 2.5E-05 8.6E-10 86.0 16.7 127 5-131 30-198 (327)
183 3vtx_A MAMA; tetratricopeptide 98.2 1.6E-05 5.5E-10 80.2 13.5 105 6-130 15-132 (184)
184 3uq3_A Heat shock protein STI1 98.1 2.5E-05 8.6E-10 82.7 14.4 126 5-131 14-165 (258)
185 2ifu_A Gamma-SNAP; membrane fu 98.1 8.1E-05 2.8E-09 82.4 18.8 137 7-183 2-140 (307)
186 1fch_A Peroxisomal targeting s 98.1 4.5E-05 1.5E-09 85.8 16.7 28 48-75 130-157 (368)
187 1qqe_A Vesicular transport pro 98.1 0.00018 6.1E-09 79.0 21.1 100 65-184 32-144 (292)
188 4g1t_A Interferon-induced prot 98.1 0.00014 4.8E-09 85.1 21.0 319 8-353 63-466 (472)
189 3u4t_A TPR repeat-containing p 98.0 0.0001 3.6E-09 78.9 18.0 232 50-354 3-255 (272)
190 3cv0_A Peroxisome targeting si 98.0 0.00011 3.9E-09 80.6 18.3 80 52-131 23-115 (327)
191 3v76_A Flavoprotein; structura 98.0 3.1E-06 1.1E-10 98.2 5.7 101 794-897 27-187 (417)
192 1ouv_A Conserved hypothetical 98.0 0.0002 6.9E-09 77.1 19.6 126 6-131 16-176 (273)
193 1ouv_A Conserved hypothetical 98.0 0.00018 6.1E-09 77.6 19.0 84 48-131 4-104 (273)
194 3q15_A PSP28, response regulat 98.0 0.00028 9.6E-09 80.3 21.2 226 7-282 112-366 (378)
195 3nf1_A KLC 1, kinesin light ch 98.0 0.00064 2.2E-08 73.9 22.9 188 50-279 27-222 (311)
196 1kf6_A Fumarate reductase flav 98.0 1.4E-05 5E-10 97.0 10.0 45 1027-1071 359-412 (602)
197 2cul_A Glucose-inhibited divis 97.9 7.5E-06 2.6E-10 87.0 6.4 100 796-898 5-126 (232)
198 3uq3_A Heat shock protein STI1 97.9 0.00041 1.4E-08 73.1 20.1 84 50-133 5-107 (258)
199 1xnf_A Lipoprotein NLPI; TPR, 97.9 0.00016 5.6E-09 77.3 17.1 110 6-131 15-137 (275)
200 3nf1_A KLC 1, kinesin light ch 97.9 0.00011 3.8E-09 80.1 15.3 121 6-144 37-186 (311)
201 2ho1_A Type 4 fimbrial biogene 97.9 0.00013 4.4E-09 77.3 15.2 20 177-196 215-234 (252)
202 3mkr_A Coatomer subunit epsilo 97.9 0.00044 1.5E-08 75.9 19.5 129 6-134 9-159 (291)
203 1qqe_A Vesicular transport pro 97.9 0.00052 1.8E-08 75.2 20.0 189 111-351 43-233 (292)
204 4eqf_A PEX5-related protein; a 97.9 0.0006 2.1E-08 76.6 21.0 126 5-130 74-238 (365)
205 2bry_A NEDD9 interacting prote 97.9 6.2E-06 2.1E-10 98.1 4.1 104 794-897 92-230 (497)
206 1rp0_A ARA6, thiazole biosynth 97.9 3.2E-05 1.1E-09 84.9 9.6 123 948-1071 119-271 (284)
207 2ond_A Cleavage stimulation fa 97.8 0.0003 1E-08 77.7 17.6 68 232-306 202-274 (308)
208 3alj_A 2-methyl-3-hydroxypyrid 97.8 1.6E-05 5.4E-10 91.1 7.1 100 795-897 12-160 (379)
209 1hz4_A MALT regulatory protein 97.8 0.004 1.4E-07 70.1 26.9 106 7-131 25-161 (373)
210 2pl2_A Hypothetical conserved 97.8 9.1E-05 3.1E-09 77.4 11.6 83 48-130 3-109 (217)
211 3mkq_B Coatomer subunit alpha; 97.8 0.00044 1.5E-08 68.9 15.6 105 630-734 27-134 (177)
212 4gyw_A UDP-N-acetylglucosamine 97.8 9.1E-05 3.1E-09 91.9 13.2 138 6-183 19-170 (723)
213 2ooe_A Cleavage stimulation fa 97.8 0.0057 1.9E-07 72.9 28.7 136 207-358 324-466 (530)
214 3e4b_A ALGK; tetratricopeptide 97.8 0.00044 1.5E-08 81.1 18.4 317 5-346 12-387 (452)
215 1chu_A Protein (L-aspartate ox 97.8 4.2E-05 1.4E-09 91.8 9.6 45 1027-1071 354-407 (540)
216 2vq2_A PILW, putative fimbrial 97.8 0.00042 1.4E-08 71.3 16.0 20 6-25 18-37 (225)
217 3nlc_A Uncharacterized protein 97.8 4E-05 1.4E-09 91.5 8.8 43 1030-1072 497-540 (549)
218 2i0z_A NAD(FAD)-utilizing dehy 97.7 3.2E-05 1.1E-09 90.7 7.7 103 794-898 26-192 (447)
219 2q7f_A YRRB protein; TPR, prot 97.7 0.00015 5E-09 76.1 12.1 105 6-130 33-150 (243)
220 4abn_A Tetratricopeptide repea 97.7 0.00012 4.1E-09 86.5 12.3 123 9-131 81-247 (474)
221 3vtx_A MAMA; tetratricopeptide 97.7 0.0018 6E-08 64.9 18.4 138 623-760 4-167 (184)
222 3edt_B KLC 2, kinesin light ch 97.7 0.0013 4.4E-08 70.1 18.2 240 61-345 12-280 (283)
223 2ho1_A Type 4 fimbrial biogene 97.6 0.0029 9.8E-08 66.7 20.2 84 50-133 37-133 (252)
224 3as5_A MAMA; tetratricopeptide 97.6 0.00067 2.3E-08 67.2 14.1 126 6-131 18-170 (186)
225 3mkr_A Coatomer subunit epsilo 97.6 0.0099 3.4E-07 65.0 23.9 97 34-130 12-126 (291)
226 1xnf_A Lipoprotein NLPI; TPR, 97.5 0.00056 1.9E-08 73.1 13.4 84 47-130 74-169 (275)
227 3dme_A Conserved exported prot 97.5 0.00031 1E-08 79.5 11.9 60 947-1010 149-209 (369)
228 4i17_A Hypothetical protein; T 97.5 0.0013 4.3E-08 68.7 15.5 112 5-135 16-147 (228)
229 2r5s_A Uncharacterized protein 97.5 0.00083 2.8E-08 67.3 13.2 141 5-184 15-170 (176)
230 4dgk_A Phytoene dehydrogenase; 97.5 7.9E-05 2.7E-09 88.7 5.9 54 948-1007 221-275 (501)
231 1rp0_A ARA6, thiazole biosynth 97.4 0.00013 4.4E-09 80.0 6.8 103 795-897 40-191 (284)
232 4g1t_A Interferon-induced prot 97.4 0.0026 8.8E-08 74.1 18.3 126 7-132 105-274 (472)
233 3nix_A Flavoprotein/dehydrogen 97.4 0.00044 1.5E-08 80.0 11.1 59 949-1009 107-165 (421)
234 3gw4_A Uncharacterized protein 97.4 0.011 3.7E-07 59.6 20.5 158 105-310 26-184 (203)
235 3cp8_A TRNA uridine 5-carboxym 97.4 0.00016 5.3E-09 87.2 7.2 103 794-898 21-175 (641)
236 3cgv_A Geranylgeranyl reductas 97.4 0.00035 1.2E-08 80.1 9.4 57 950-1009 104-161 (397)
237 3gw4_A Uncharacterized protein 97.4 0.0047 1.6E-07 62.4 16.9 90 50-145 26-141 (203)
238 2ond_A Cleavage stimulation fa 97.3 0.0029 9.9E-08 69.7 16.1 123 8-130 69-228 (308)
239 1hz4_A MALT regulatory protein 97.3 0.087 3E-06 59.0 28.9 88 52-145 16-127 (373)
240 2v3a_A Rubredoxin reductase; a 97.3 0.00026 9E-09 81.1 7.7 108 372-506 257-376 (384)
241 2vou_A 2,6-dihydroxypyridine h 97.3 0.00021 7.3E-09 82.2 6.8 99 795-897 6-153 (397)
242 1k0i_A P-hydroxybenzoate hydro 97.3 0.00023 7.8E-09 81.8 7.0 102 796-897 4-163 (394)
243 2vq2_A PILW, putative fimbrial 97.3 0.0054 1.9E-07 62.8 16.9 83 49-131 7-103 (225)
244 1y0p_A Fumarate reductase flav 97.3 0.00032 1.1E-08 84.9 8.5 54 844-897 257-317 (571)
245 3rjv_A Putative SEL1 repeat pr 97.3 0.0034 1.2E-07 65.0 15.3 85 49-134 17-118 (212)
246 2q7f_A YRRB protein; TPR, prot 97.3 0.0015 5.1E-08 68.2 12.6 125 6-130 67-218 (243)
247 3e1t_A Halogenase; flavoprotei 97.3 0.0011 3.7E-08 79.1 12.7 60 949-1010 112-172 (512)
248 2x3n_A Probable FAD-dependent 97.3 0.00022 7.7E-09 82.0 6.5 101 795-897 7-166 (399)
249 2fo7_A Synthetic consensus TPR 97.3 0.0018 6.2E-08 59.9 11.8 106 6-131 11-129 (136)
250 4gco_A Protein STI-1; structur 97.3 0.0013 4.3E-08 62.2 10.7 63 48-131 45-107 (126)
251 1qo8_A Flavocytochrome C3 fuma 97.3 0.00031 1.1E-08 84.9 7.9 53 845-897 253-312 (566)
252 1s3e_A Amine oxidase [flavin-c 97.2 0.00017 5.8E-09 86.3 5.1 45 958-1008 222-266 (520)
253 4b4t_Q 26S proteasome regulato 97.2 0.012 4E-07 67.7 20.3 29 50-78 4-32 (434)
254 3u3w_A Transcriptional activat 97.2 0.0037 1.3E-07 68.1 15.1 150 6-183 85-262 (293)
255 3e4b_A ALGK; tetratricopeptide 97.2 0.0075 2.5E-07 70.5 18.5 47 288-346 302-351 (452)
256 1yvv_A Amine oxidase, flavin-c 97.2 0.00046 1.6E-08 77.1 7.7 32 1039-1071 293-324 (336)
257 3qou_A Protein YBBN; thioredox 97.2 0.0013 4.3E-08 72.0 11.1 140 6-184 127-281 (287)
258 2h6f_A Protein farnesyltransfe 97.2 0.0034 1.2E-07 71.7 15.0 105 6-130 107-225 (382)
259 3rjv_A Putative SEL1 repeat pr 97.2 0.0059 2E-07 63.2 15.6 49 83-132 25-80 (212)
260 2gqw_A Ferredoxin reductase; f 97.2 0.00026 9E-09 81.8 5.6 88 796-898 147-240 (408)
261 3i3l_A Alkylhalidase CMLS; fla 97.2 0.0011 3.8E-08 80.1 11.0 59 949-1010 129-188 (591)
262 3qky_A Outer membrane assembly 97.1 0.0021 7E-08 68.7 11.8 107 5-131 24-174 (261)
263 4i17_A Hypothetical protein; T 97.1 0.014 4.8E-07 60.5 18.0 85 47-131 4-102 (228)
264 2qfc_A PLCR protein; TPR, HTH, 97.1 0.0065 2.2E-07 66.2 15.9 119 6-144 85-229 (293)
265 1xhc_A NADH oxidase /nitrite r 97.1 0.0004 1.4E-08 79.1 5.7 85 796-898 145-235 (367)
266 1y56_B Sarcosine oxidase; dehy 97.1 0.0022 7.6E-08 73.0 12.1 57 947-1010 148-205 (382)
267 2vsy_A XCC0866; transferase, g 97.1 0.002 6.9E-08 77.6 12.3 103 9-131 2-117 (568)
268 3as5_A MAMA; tetratricopeptide 97.1 0.0057 2E-07 60.2 13.7 97 35-131 22-136 (186)
269 1d4d_A Flavocytochrome C fumar 97.1 0.00075 2.6E-08 81.6 8.1 54 844-897 257-317 (572)
270 3qj4_A Renalase; FAD/NAD(P)-bi 97.0 0.00043 1.5E-08 77.8 5.6 34 1038-1072 307-340 (342)
271 3atr_A Conserved archaeal prot 97.0 0.00039 1.3E-08 81.6 5.3 103 795-897 7-162 (453)
272 3gyz_A Chaperone protein IPGC; 97.0 0.0025 8.5E-08 62.5 10.2 110 9-131 8-130 (151)
273 2gf3_A MSOX, monomeric sarcosi 97.0 0.0016 5.5E-08 74.3 10.2 71 930-1010 135-205 (389)
274 3ef6_A Toluene 1,2-dioxygenase 97.0 0.0004 1.4E-08 80.3 5.0 90 796-898 145-242 (410)
275 1hh8_A P67PHOX, NCF-2, neutrop 97.0 0.005 1.7E-07 63.0 12.8 105 6-133 16-149 (213)
276 2ooe_A Cleavage stimulation fa 97.0 0.014 4.7E-07 69.5 18.5 194 46-305 268-495 (530)
277 3oz2_A Digeranylgeranylglycero 97.0 0.001 3.5E-08 75.9 8.2 57 950-1009 104-161 (397)
278 3rp8_A Flavoprotein monooxygen 97.0 0.0004 1.4E-08 80.2 4.8 46 848-897 133-181 (407)
279 3lxd_A FAD-dependent pyridine 97.0 0.00061 2.1E-08 78.9 6.0 90 796-898 154-252 (415)
280 3pl8_A Pyranose 2-oxidase; sub 97.0 0.00014 4.8E-09 88.6 0.5 64 959-1023 271-337 (623)
281 1ryi_A Glycine oxidase; flavop 96.9 0.00043 1.5E-08 79.0 4.1 50 845-897 167-219 (382)
282 4gyw_A UDP-N-acetylglucosamine 96.9 0.0024 8.2E-08 79.1 11.1 106 6-131 53-171 (723)
283 4gcn_A Protein STI-1; structur 96.9 0.0057 1.9E-07 57.6 11.3 93 5-131 17-109 (127)
284 2vgx_A Chaperone SYCD; alterna 96.9 0.003 1E-07 61.5 9.6 80 52-131 23-115 (148)
285 4ga2_A E3 SUMO-protein ligase 96.9 0.0011 3.9E-08 64.6 6.4 102 7-128 8-122 (150)
286 3fg2_P Putative rubredoxin red 96.9 0.00058 2E-08 78.8 4.9 90 796-898 144-242 (404)
287 2qfc_A PLCR protein; TPR, HTH, 96.9 0.044 1.5E-06 59.5 19.9 38 271-309 235-273 (293)
288 3nrn_A Uncharacterized protein 96.9 0.001 3.4E-08 77.2 6.7 54 947-1008 188-241 (421)
289 3ps9_A TRNA 5-methylaminomethy 96.9 0.00083 2.8E-08 83.0 6.4 48 848-897 423-473 (676)
290 2qa1_A PGAE, polyketide oxygen 96.9 0.001 3.6E-08 78.9 7.0 104 794-897 11-165 (500)
291 2qa2_A CABE, polyketide oxygen 96.9 0.0011 3.8E-08 78.6 7.2 104 794-897 12-166 (499)
292 2xcb_A PCRH, regulatory protei 96.8 0.0038 1.3E-07 59.9 9.5 47 85-131 61-112 (142)
293 2uzz_A N-methyl-L-tryptophan o 96.8 0.00089 3E-08 76.0 5.6 49 846-897 153-204 (372)
294 3fbs_A Oxidoreductase; structu 96.8 0.00095 3.2E-08 72.9 5.7 86 795-898 142-227 (297)
295 1m6i_A Programmed cell death p 96.8 0.00094 3.2E-08 79.2 6.0 90 796-898 182-283 (493)
296 3s5w_A L-ornithine 5-monooxyge 96.8 0.00098 3.4E-08 78.3 6.1 44 855-898 329-378 (463)
297 3ro3_A PINS homolog, G-protein 96.8 0.065 2.2E-06 50.9 18.3 152 107-307 11-163 (164)
298 1q1r_A Putidaredoxin reductase 96.8 0.00071 2.4E-08 78.8 4.8 90 796-898 151-251 (431)
299 3ihg_A RDME; flavoenzyme, anth 96.8 0.0013 4.6E-08 78.8 7.0 54 844-897 122-183 (535)
300 3upv_A Heat shock protein STI1 96.8 0.0054 1.9E-07 57.1 9.9 86 6-132 14-99 (126)
301 2e2e_A Formate-dependent nitri 96.8 0.0018 6.2E-08 64.5 6.9 106 6-131 20-141 (177)
302 1trb_A Thioredoxin reductase; 96.7 0.0013 4.4E-08 72.9 6.1 89 796-898 147-248 (320)
303 3c96_A Flavin-containing monoo 96.7 0.0011 3.7E-08 76.6 5.6 50 848-897 113-169 (410)
304 3pvc_A TRNA 5-methylaminomethy 96.7 0.002 7E-08 79.6 8.4 48 848-897 418-469 (689)
305 2hr2_A Hypothetical protein; a 96.7 0.0042 1.4E-07 61.1 8.7 105 5-131 20-128 (159)
306 3nyc_A D-arginine dehydrogenas 96.7 0.00067 2.3E-08 77.1 3.5 47 848-897 160-209 (381)
307 2xdo_A TETX2 protein; tetracyc 96.7 0.00089 3E-08 77.0 4.4 40 856-897 140-182 (398)
308 3qky_A Outer membrane assembly 96.7 0.031 1.1E-06 59.3 16.4 85 46-130 11-122 (261)
309 4ga2_A E3 SUMO-protein ligase 96.7 0.0033 1.1E-07 61.2 7.8 77 55-131 2-91 (150)
310 2gag_B Heterotetrameric sarcos 96.6 0.0039 1.3E-07 71.5 9.5 56 948-1010 174-230 (405)
311 3ka7_A Oxidoreductase; structu 96.6 0.0017 5.9E-08 75.1 6.5 56 947-1009 195-251 (425)
312 3n71_A Histone lysine methyltr 96.6 0.0076 2.6E-07 71.0 12.0 139 4-184 317-461 (490)
313 3urz_A Uncharacterized protein 96.6 0.005 1.7E-07 63.5 9.1 100 5-131 13-114 (208)
314 2pzi_A Probable serine/threoni 96.6 0.0096 3.3E-07 73.5 13.2 128 7-135 402-564 (681)
315 4abn_A Tetratricopeptide repea 96.6 0.026 8.7E-07 66.4 16.2 181 47-302 99-287 (474)
316 3fmw_A Oxygenase; mithramycin, 96.6 0.0014 4.7E-08 79.1 5.3 103 794-897 49-207 (570)
317 1hxi_A PEX5, peroxisome target 96.6 0.0053 1.8E-07 57.3 8.2 65 47-132 48-112 (121)
318 3nks_A Protoporphyrinogen oxid 96.6 0.0012 4.1E-08 77.8 4.6 54 948-1008 234-288 (477)
319 2fo7_A Synthetic consensus TPR 96.6 0.016 5.3E-07 53.4 11.6 79 52-130 3-94 (136)
320 3dje_A Fructosyl amine: oxygen 96.6 0.0028 9.5E-08 73.8 7.6 103 796-900 8-224 (438)
321 4g6h_A Rotenone-insensitive NA 96.5 0.0013 4.6E-08 77.9 4.8 99 796-898 219-333 (502)
322 3ab1_A Ferredoxin--NADP reduct 96.5 0.0024 8.2E-08 72.2 6.4 90 795-898 164-264 (360)
323 2e4g_A Tryptophan halogenase; 96.5 0.0071 2.4E-07 72.6 10.9 56 948-1010 194-252 (550)
324 1a17_A Serine/threonine protei 96.5 0.012 4.2E-07 57.0 10.7 83 48-130 45-142 (166)
325 2yhc_A BAMD, UPF0169 lipoprote 96.5 0.011 3.7E-07 61.6 11.0 55 5-76 13-67 (225)
326 3sz7_A HSC70 cochaperone (SGT) 96.5 0.0094 3.2E-07 58.5 9.9 80 52-131 13-105 (164)
327 3ro3_A PINS homolog, G-protein 96.5 0.12 4E-06 49.0 17.6 93 253-350 70-162 (164)
328 2oln_A NIKD protein; flavoprot 96.5 0.0027 9.3E-08 72.8 6.5 46 848-896 159-207 (397)
329 2r0c_A REBC; flavin adenine di 96.5 0.0048 1.6E-07 74.1 8.9 56 950-1009 140-195 (549)
330 2zbw_A Thioredoxin reductase; 96.5 0.0017 5.7E-08 72.5 4.6 90 795-898 153-253 (335)
331 2gmh_A Electron transfer flavo 96.4 0.002 6.9E-08 77.9 5.6 54 844-897 146-217 (584)
332 2vsy_A XCC0866; transferase, g 96.4 0.012 4.3E-07 70.6 12.5 106 6-131 33-154 (568)
333 4gcn_A Protein STI-1; structur 96.4 0.012 4.2E-07 55.2 10.0 99 51-183 9-108 (127)
334 3jsk_A Cypbp37 protein; octame 96.4 0.0028 9.6E-08 70.6 5.9 31 795-825 80-117 (344)
335 3d1c_A Flavin-containing putat 96.4 0.0022 7.6E-08 72.5 5.3 96 795-898 167-273 (369)
336 4at0_A 3-ketosteroid-delta4-5a 96.4 0.0039 1.3E-07 74.2 7.6 45 1028-1072 450-508 (510)
337 2aqj_A Tryptophan halogenase, 96.3 0.0029 1E-07 75.8 6.2 49 848-898 171-223 (538)
338 3q49_B STIP1 homology and U bo 96.3 0.02 6.7E-07 53.7 10.9 85 47-131 6-103 (137)
339 3r9u_A Thioredoxin reductase; 96.3 0.0025 8.5E-08 70.2 5.1 87 795-898 148-245 (315)
340 3da1_A Glycerol-3-phosphate de 96.3 0.0033 1.1E-07 75.7 6.5 62 947-1009 169-231 (561)
341 1hh8_A P67PHOX, NCF-2, neutrop 96.3 0.023 8E-07 57.9 11.8 78 54-131 10-97 (213)
342 2c2l_A CHIP, carboxy terminus 96.3 0.015 5.2E-07 63.0 10.8 86 6-132 14-99 (281)
343 1elw_A TPR1-domain of HOP; HOP 96.2 0.019 6.6E-07 51.6 9.8 87 6-133 14-100 (118)
344 1fl2_A Alkyl hydroperoxide red 96.2 0.0048 1.6E-07 67.9 6.7 86 795-898 145-243 (310)
345 3urz_A Uncharacterized protein 96.2 0.046 1.6E-06 56.1 13.8 74 49-130 3-79 (208)
346 2b9w_A Putative aminooxidase; 96.2 0.0012 4.1E-08 76.5 1.7 53 950-1009 205-257 (424)
347 3cty_A Thioredoxin reductase; 96.2 0.0033 1.1E-07 69.6 5.3 86 795-898 156-253 (319)
348 2vyi_A SGTA protein; chaperone 96.2 0.025 8.5E-07 51.8 10.5 61 50-131 46-106 (131)
349 3u3w_A Transcriptional activat 96.2 0.32 1.1E-05 52.4 21.0 83 266-353 190-273 (293)
350 2yhc_A BAMD, UPF0169 lipoprote 96.1 0.12 4.1E-06 53.5 16.7 72 272-354 147-218 (225)
351 2q7v_A Thioredoxin reductase; 96.1 0.0054 1.9E-07 68.0 6.4 87 795-898 153-250 (325)
352 3gwf_A Cyclohexanone monooxyge 96.1 0.0045 1.5E-07 74.0 6.1 43 852-898 340-385 (540)
353 3k9i_A BH0479 protein; putativ 96.1 0.0093 3.2E-07 54.9 6.9 86 8-131 2-87 (117)
354 2h6f_A Protein farnesyltransfe 96.1 0.036 1.2E-06 63.2 13.1 100 6-125 141-255 (382)
355 4hb9_A Similarities with proba 96.1 0.0061 2.1E-07 69.8 6.8 40 856-897 123-166 (412)
356 2dkh_A 3-hydroxybenzoate hydro 96.1 0.0036 1.2E-07 76.6 5.1 53 845-897 144-211 (639)
357 1a17_A Serine/threonine protei 96.1 0.023 8E-07 54.9 10.1 82 50-131 13-107 (166)
358 3k30_A Histamine dehydrogenase 96.0 0.0079 2.7E-07 74.3 7.9 93 795-898 524-625 (690)
359 3axb_A Putative oxidoreductase 96.0 0.011 3.8E-07 68.8 8.5 55 948-1009 181-253 (448)
360 1vdc_A NTR, NADPH dependent th 96.0 0.0067 2.3E-07 67.5 6.2 87 795-898 160-260 (333)
361 2lni_A Stress-induced-phosphop 96.0 0.033 1.1E-06 51.4 10.1 84 48-131 14-110 (133)
362 3kkj_A Amine oxidase, flavin-c 95.9 0.0015 5.2E-08 69.5 0.7 37 1034-1071 288-324 (336)
363 4b4t_Q 26S proteasome regulato 95.9 0.2 6.8E-06 57.1 18.7 89 258-350 161-249 (434)
364 2xev_A YBGF; tetratricopeptide 95.9 0.03 1E-06 51.8 9.6 86 5-131 11-102 (129)
365 2pyx_A Tryptophan halogenase; 95.9 0.029 9.9E-07 66.9 11.7 57 948-1011 175-234 (526)
366 2pm7_A Protein WEB1, protein t 95.9 0.17 5.9E-06 57.3 17.4 134 639-772 145-286 (399)
367 2kck_A TPR repeat; tetratricop 95.9 0.018 6E-07 51.4 7.6 85 48-132 4-104 (112)
368 2bry_A NEDD9 interacting prote 95.9 0.0014 4.9E-08 77.6 0.2 90 922-1012 108-232 (497)
369 3rkv_A Putative peptidylprolyl 95.9 0.032 1.1E-06 54.4 10.0 82 50-131 11-123 (162)
370 3ma5_A Tetratricopeptide repea 95.9 0.073 2.5E-06 47.3 11.6 75 46-147 3-77 (100)
371 4gco_A Protein STI-1; structur 95.8 0.049 1.7E-06 51.1 10.8 81 625-705 14-107 (126)
372 2lni_A Stress-induced-phosphop 95.8 0.034 1.2E-06 51.3 9.7 95 6-120 26-133 (133)
373 2gjc_A Thiazole biosynthetic e 95.8 0.013 4.4E-07 64.8 7.4 31 796-826 67-104 (326)
374 2dba_A Smooth muscle cell asso 95.8 0.049 1.7E-06 51.4 10.8 85 47-131 25-125 (148)
375 1klx_A Cysteine rich protein B 95.8 0.051 1.7E-06 51.9 10.7 68 64-131 9-87 (138)
376 2a87_A TRXR, TR, thioredoxin r 95.7 0.0072 2.4E-07 67.5 5.3 86 795-898 156-253 (335)
377 3c4n_A Uncharacterized protein 95.7 0.0084 2.9E-07 69.0 5.8 51 844-897 174-236 (405)
378 3i6d_A Protoporphyrinogen oxid 95.7 0.0047 1.6E-07 72.3 3.8 40 963-1008 248-287 (470)
379 1klx_A Cysteine rich protein B 95.7 0.034 1.2E-06 53.2 9.2 99 10-132 9-124 (138)
380 4f3v_A ESX-1 secretion system 95.6 0.057 2E-06 58.3 11.6 118 625-760 103-234 (282)
381 4a9w_A Monooxygenase; baeyer-v 95.6 0.049 1.7E-06 60.7 11.7 81 922-1009 19-131 (357)
382 1na0_A Designed protein CTPR3; 95.6 0.054 1.8E-06 49.0 10.0 82 50-131 9-103 (125)
383 3n71_A Histone lysine methyltr 95.6 0.035 1.2E-06 65.3 10.5 114 634-760 319-461 (490)
384 1wao_1 Serine/threonine protei 95.6 0.0063 2.2E-07 71.7 4.2 107 6-132 16-137 (477)
385 2fbn_A 70 kDa peptidylprolyl i 95.6 0.046 1.6E-06 55.3 10.2 82 50-131 38-148 (198)
386 4gut_A Lysine-specific histone 95.6 0.0036 1.2E-07 77.9 2.0 42 961-1008 542-583 (776)
387 4ap3_A Steroid monooxygenase; 95.5 0.012 4.2E-07 70.4 6.4 43 851-898 352-397 (549)
388 2qcu_A Aerobic glycerol-3-phos 95.5 0.012 4.1E-07 69.7 6.2 101 796-896 5-209 (501)
389 1hyu_A AHPF, alkyl hydroperoxi 95.4 0.016 5.5E-07 69.0 7.0 86 795-898 356-454 (521)
390 1zu2_A Mitochondrial import re 95.4 0.0098 3.4E-07 58.3 4.1 87 4-131 10-117 (158)
391 3qww_A SET and MYND domain-con 95.4 0.057 1.9E-06 62.4 11.2 100 8-135 310-412 (433)
392 1elr_A TPR2A-domain of HOP; HO 95.4 0.043 1.5E-06 50.2 8.4 81 51-131 5-105 (131)
393 1ps9_A 2,4-dienoyl-COA reducta 95.4 0.0076 2.6E-07 74.2 3.9 51 847-898 578-629 (671)
394 3gyz_A Chaperone protein IPGC; 95.3 0.099 3.4E-06 50.9 11.2 83 623-705 35-130 (151)
395 1p5q_A FKBP52, FK506-binding p 95.3 0.049 1.7E-06 60.7 10.2 115 6-125 157-284 (336)
396 4e6h_A MRNA 3'-END-processing 95.3 1.1 3.8E-05 54.7 22.8 94 205-304 379-501 (679)
397 3qou_A Protein YBBN; thioredox 95.3 0.26 9E-06 53.2 15.6 65 48-133 115-179 (287)
398 2pzi_A Probable serine/threoni 95.2 0.25 8.5E-06 60.8 17.0 70 61-130 402-492 (681)
399 3qwp_A SET and MYND domain-con 95.2 0.087 3E-06 60.9 12.0 107 4-135 295-401 (429)
400 3uox_A Otemo; baeyer-villiger 95.2 0.019 6.6E-07 68.6 6.6 45 848-897 344-391 (545)
401 3itj_A Thioredoxin reductase 1 95.1 0.031 1.1E-06 61.9 7.8 88 922-1013 38-145 (338)
402 3c4a_A Probable tryptophan hyd 95.1 0.0023 7.8E-08 73.1 -1.6 91 796-897 2-143 (381)
403 1na0_A Designed protein CTPR3; 95.1 0.1 3.5E-06 47.1 10.1 94 6-119 19-125 (125)
404 2h88_A Succinate dehydrogenase 95.1 0.019 6.5E-07 69.6 6.3 50 848-897 161-217 (621)
405 2weu_A Tryptophan 5-halogenase 95.1 0.015 5.1E-07 69.1 5.3 100 796-897 4-230 (511)
406 3h28_A Sulfide-quinone reducta 95.1 0.019 6.6E-07 66.5 6.1 54 845-898 203-257 (430)
407 4f3v_A ESX-1 secretion system 95.1 0.068 2.3E-06 57.7 9.9 123 9-131 19-197 (282)
408 1cjc_A Protein (adrenodoxin re 95.1 0.018 6.3E-07 67.3 5.8 49 855-903 270-339 (460)
409 2wdq_A Succinate dehydrogenase 95.0 0.037 1.3E-06 66.9 8.5 100 796-895 9-204 (588)
410 1pj5_A N,N-dimethylglycine oxi 95.0 0.093 3.2E-06 66.2 12.6 57 947-1010 150-207 (830)
411 2fbn_A 70 kDa peptidylprolyl i 95.0 0.055 1.9E-06 54.7 8.7 116 5-125 47-176 (198)
412 2qx5_A Nucleoporin NIC96; mRNA 95.0 0.55 1.9E-05 56.7 18.2 140 56-196 300-481 (661)
413 2vgx_A Chaperone SYCD; alterna 94.9 0.16 5.3E-06 49.0 11.2 82 624-705 21-115 (148)
414 3lzw_A Ferredoxin--NADP reduct 94.8 0.093 3.2E-06 57.8 10.6 85 922-1013 23-129 (332)
415 2kat_A Uncharacterized protein 94.8 0.08 2.7E-06 48.1 8.4 71 47-144 16-86 (115)
416 3upv_A Heat shock protein STI1 94.8 0.18 6.3E-06 46.3 11.0 81 625-705 5-98 (126)
417 1ihg_A Cyclophilin 40; ppiase 94.8 0.088 3E-06 59.6 10.4 82 50-131 223-333 (370)
418 3f8d_A Thioredoxin reductase ( 94.8 0.057 2E-06 59.2 8.6 85 922-1013 31-128 (323)
419 1pn0_A Phenol 2-monooxygenase; 94.8 0.1 3.5E-06 64.0 11.5 60 950-1009 121-229 (665)
420 1p5q_A FKBP52, FK506-binding p 94.7 0.095 3.3E-06 58.3 10.3 83 49-131 146-256 (336)
421 2bs2_A Quinol-fumarate reducta 94.7 0.049 1.7E-06 66.5 8.4 100 796-895 7-218 (660)
422 3h8l_A NADH oxidase; membrane 94.6 0.023 7.9E-07 65.3 5.0 52 843-898 219-271 (409)
423 2xcb_A PCRH, regulatory protei 94.5 0.23 7.9E-06 47.0 11.2 81 625-705 19-112 (142)
424 2vdc_G Glutamate synthase [NAD 94.5 0.012 4.2E-07 68.6 2.4 89 794-898 264-379 (456)
425 2r5s_A Uncharacterized protein 94.5 0.21 7.2E-06 49.3 11.3 106 6-131 50-170 (176)
426 1lqt_A FPRA; NADP+ derivative, 94.4 0.039 1.3E-06 64.4 6.2 50 855-904 265-333 (456)
427 1o94_A Tmadh, trimethylamine d 94.3 0.03 1E-06 69.5 5.4 92 795-898 529-647 (729)
428 3sz7_A HSC70 cochaperone (SGT) 94.2 0.26 9E-06 47.8 11.0 82 624-705 11-105 (164)
429 3nlc_A Uncharacterized protein 94.0 0.067 2.3E-06 63.7 7.4 58 948-1011 220-278 (549)
430 4e6h_A MRNA 3'-END-processing 94.0 0.54 1.8E-05 57.5 15.5 54 47-100 340-402 (679)
431 3q49_B STIP1 homology and U bo 94.0 0.32 1.1E-05 45.1 10.8 82 624-705 9-103 (137)
432 2gag_A Heterotetrameric sarcos 93.9 0.024 8.3E-07 72.6 3.5 83 795-898 285-384 (965)
433 1kt0_A FKBP51, 51 kDa FK506-bi 93.9 0.17 5.9E-06 58.9 10.4 85 50-134 268-380 (457)
434 2dba_A Smooth muscle cell asso 93.9 0.25 8.4E-06 46.3 9.8 95 5-116 37-144 (148)
435 3v76_A Flavoprotein; structura 93.9 0.1 3.5E-06 60.1 8.3 57 947-1010 131-187 (417)
436 3rkv_A Putative peptidylprolyl 93.8 0.32 1.1E-05 47.1 10.8 83 623-705 10-123 (162)
437 2q0l_A TRXR, thioredoxin reduc 93.7 0.18 6.1E-06 55.1 9.7 85 922-1013 17-117 (311)
438 3klj_A NAD(FAD)-dependent dehy 93.6 0.12 4E-06 58.9 8.1 83 922-1014 25-120 (385)
439 3hyw_A Sulfide-quinone reducta 93.6 0.079 2.7E-06 61.3 6.7 54 845-898 203-257 (430)
440 3sx6_A Sulfide-quinone reducta 93.5 0.076 2.6E-06 61.6 6.5 53 845-897 211-269 (437)
441 4gde_A UDP-galactopyranose mut 93.4 0.017 5.8E-07 68.4 0.8 52 948-1007 222-273 (513)
442 2l6j_A TPR repeat-containing p 93.4 0.049 1.7E-06 48.7 3.7 88 6-128 14-101 (111)
443 1elw_A TPR1-domain of HOP; HOP 93.4 0.54 1.8E-05 41.6 10.9 81 625-705 5-98 (118)
444 2xve_A Flavin-containing monoo 93.4 0.26 8.9E-06 57.5 10.9 65 948-1013 101-171 (464)
445 1hxi_A PEX5, peroxisome target 93.4 0.092 3.1E-06 48.7 5.6 30 101-130 47-76 (121)
446 2if4_A ATFKBP42; FKBP-like, al 93.2 0.15 5E-06 56.8 8.1 86 50-135 179-294 (338)
447 1ihg_A Cyclophilin 40; ppiase 93.2 0.14 4.8E-06 57.9 7.9 118 5-126 232-362 (370)
448 2gv8_A Monooxygenase; FMO, FAD 93.2 0.33 1.1E-05 56.3 11.2 64 949-1013 116-182 (447)
449 2vyi_A SGTA protein; chaperone 93.2 0.6 2.1E-05 42.1 11.0 82 624-705 12-106 (131)
450 2c2l_A CHIP, carboxy terminus 93.1 0.36 1.2E-05 52.0 10.8 66 48-134 2-67 (281)
451 2xev_A YBGF; tetratricopeptide 93.1 0.25 8.7E-06 45.2 8.3 56 54-130 6-64 (129)
452 1kt0_A FKBP51, 51 kDa FK506-bi 92.9 0.22 7.6E-06 57.9 9.2 118 5-127 277-407 (457)
453 2gqf_A Hypothetical protein HI 92.8 0.34 1.2E-05 55.4 10.3 59 946-1011 107-169 (401)
454 1elr_A TPR2A-domain of HOP; HO 92.7 0.55 1.9E-05 42.5 10.0 81 625-705 5-105 (131)
455 3ma5_A Tetratricopeptide repea 92.4 0.36 1.2E-05 42.7 8.0 51 6-76 17-67 (100)
456 2pm7_A Protein WEB1, protein t 92.4 1.8 6.3E-05 48.9 15.5 145 614-759 174-361 (399)
457 1wao_1 Serine/threonine protei 92.1 0.048 1.7E-06 64.1 2.1 76 56-131 12-100 (477)
458 2hr2_A Hypothetical protein; a 92.0 1 3.6E-05 43.9 11.2 80 626-705 13-128 (159)
459 2uy1_A Cleavage stimulation fa 92.0 11 0.00038 43.9 22.4 64 233-306 354-417 (493)
460 3g5s_A Methylenetetrahydrofola 91.9 0.031 1.1E-06 62.8 0.1 38 1033-1071 320-358 (443)
461 4dgk_A Phytoene dehydrogenase; 91.9 0.75 2.6E-05 54.0 12.2 53 842-896 221-277 (501)
462 2if4_A ATFKBP42; FKBP-like, al 91.9 0.26 9E-06 54.7 7.8 121 5-129 188-323 (338)
463 3lvg_A Clathrin heavy chain 1; 91.6 0.007 2.4E-07 68.8 -5.4 217 37-270 132-396 (624)
464 1na3_A Designed protein CTPR2; 91.6 0.38 1.3E-05 40.8 6.9 62 49-131 8-69 (91)
465 3mzk_B Protein transport prote 91.6 3.2 0.00011 47.4 16.3 122 641-762 154-306 (441)
466 2kck_A TPR repeat; tetratricop 91.5 0.47 1.6E-05 41.6 7.7 53 79-131 9-66 (112)
467 2e2e_A Formate-dependent nitri 91.5 0.94 3.2E-05 44.2 10.7 83 623-705 43-141 (177)
468 1gte_A Dihydropyrimidine dehyd 91.1 0.15 5.2E-06 65.6 5.4 86 796-897 334-442 (1025)
469 3alj_A 2-methyl-3-hydroxypyrid 91.0 0.58 2E-05 52.7 9.7 54 948-1010 107-160 (379)
470 1na3_A Designed protein CTPR2; 91.0 0.59 2E-05 39.6 7.6 54 6-79 19-72 (91)
471 2l6j_A TPR repeat-containing p 90.9 0.53 1.8E-05 41.6 7.4 62 50-132 4-65 (111)
472 3qww_A SET and MYND domain-con 90.6 0.11 3.9E-06 59.9 3.2 68 684-773 345-415 (433)
473 4fk1_A Putative thioredoxin re 90.5 0.68 2.3E-05 50.4 9.3 85 922-1013 22-120 (304)
474 2e1m_A L-glutamate oxidase; L- 90.3 0.071 2.4E-06 60.3 1.1 35 794-828 44-84 (376)
475 2jae_A L-amino acid oxidase; o 90.3 0.063 2.2E-06 63.2 0.6 55 949-1008 240-294 (489)
476 1rsg_A FMS1 protein; FAD bindi 89.9 0.068 2.3E-06 63.4 0.5 35 794-828 8-48 (516)
477 2yg5_A Putrescine oxidase; oxi 89.7 0.07 2.4E-06 62.0 0.4 35 794-828 5-44 (453)
478 3lvg_A Clathrin heavy chain 1; 89.5 0.52 1.8E-05 53.8 7.1 214 7-246 240-509 (624)
479 3mv2_B Coatomer subunit epsilo 89.5 1.4 4.8E-05 48.0 10.5 95 6-100 110-235 (310)
480 2uy1_A Cleavage stimulation fa 89.3 26 0.00087 40.8 22.2 95 233-343 286-380 (493)
481 2ivd_A PPO, PPOX, protoporphyr 89.3 0.079 2.7E-06 62.1 0.5 35 794-828 16-55 (478)
482 2bcg_G Secretory pathway GDP d 88.9 0.099 3.4E-06 60.9 0.9 56 948-1010 242-300 (453)
483 2vvm_A Monoamine oxidase N; FA 88.6 0.096 3.3E-06 61.7 0.6 37 793-829 38-79 (495)
484 4g26_A Pentatricopeptide repea 88.2 3.3 0.00011 48.6 13.4 52 49-100 104-164 (501)
485 3hdq_A UDP-galactopyranose mut 88.2 0.11 3.8E-06 59.2 0.6 36 794-829 29-69 (397)
486 2kc7_A BFR218_protein; tetratr 88.1 0.67 2.3E-05 40.3 5.7 54 5-78 9-63 (99)
487 4g26_A Pentatricopeptide repea 88.0 6.8 0.00023 45.9 16.0 25 248-272 171-195 (501)
488 4a5l_A Thioredoxin reductase; 88.0 0.99 3.4E-05 49.0 8.3 86 922-1014 20-125 (314)
489 1y0p_A Fumarate reductase flav 87.7 1.8 6.2E-05 51.7 11.0 60 948-1009 255-316 (571)
490 2vou_A 2,6-dihydroxypyridine h 87.6 0.84 2.9E-05 51.8 7.6 43 961-1009 110-152 (397)
491 1sez_A Protoporphyrinogen oxid 87.4 0.12 4.2E-06 60.9 0.4 34 795-828 14-52 (504)
492 2iid_A L-amino-acid oxidase; f 87.1 0.14 4.7E-06 60.4 0.6 56 949-1009 242-297 (498)
493 3mv2_B Coatomer subunit epsilo 86.6 3.1 0.00011 45.3 11.0 62 39-100 88-160 (310)
494 3ihm_A Styrene monooxygenase A 86.6 0.12 4.1E-06 59.8 -0.4 29 794-822 22-55 (430)
495 1yvv_A Amine oxidase, flavin-c 86.5 2.2 7.5E-05 46.7 10.1 45 962-1011 119-163 (336)
496 3qwp_A SET and MYND domain-con 86.5 4.8 0.00017 46.1 13.2 68 684-773 334-404 (429)
497 1i8t_A UDP-galactopyranose mut 86.4 0.16 5.4E-06 57.4 0.6 33 796-828 3-40 (367)
498 2z3y_A Lysine-specific histone 86.3 0.2 6.7E-06 61.4 1.4 51 956-1007 405-455 (662)
499 4dsg_A UDP-galactopyranose mut 86.3 0.17 5.7E-06 59.5 0.7 36 794-829 9-50 (484)
500 4gcm_A TRXR, thioredoxin reduc 86.3 1.9 6.5E-05 46.8 9.3 84 922-1013 22-119 (312)
No 1
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4e-32 Score=325.70 Aligned_cols=278 Identities=46% Similarity=0.731 Sum_probs=234.1
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccc-------------------------------------hh
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLN-------------------------------------LE 831 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~-------------------------------------~~ 831 (1074)
+.+|+||||||+|++||+.|++ +++|+.+..||... +.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 104 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNLQ 104 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCHH
Confidence 4469999999999999999998 78898777766421 11
Q ss_pred hhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCC--CCCcc
Q psy14927 832 TMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIE--VDEET 909 (1074)
Q Consensus 832 ~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~--~~~~~ 909 (1074)
.+..........+...+...+...+|+++.|++..+++..+.|.+.+|+..++.||+||||||++|+++||++ .....
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~ipg~~~~~~~~~ 184 (491)
T 3urh_A 105 KMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVAFDEKT 184 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEECCCBTTBCCCCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCCCCCCcccccCCee
Confidence 1222222233334444566778889999999999999999999888876678999999999999988888876 34567
Q ss_pred eechhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEE
Q psy14927 910 IVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVT 972 (1074)
Q Consensus 910 v~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~ 972 (1074)
++++.++..... |..|.+.|.+||++++.++++ +.+++++.+.+.+.+++.||++++++.+.
T Consensus 185 ~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~~~d~~~~~~l~~~l~~~gV~v~~~~~v~ 263 (491)
T 3urh_A 185 IVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL-GGMDGEVAKQLQRMLTKQGIDFKLGAKVT 263 (491)
T ss_dssp EECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-SSSCHHHHHHHHHHHHHTTCEEECSEEEE
T ss_pred EEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc-ccCCHHHHHHHHHHHHhCCCEEEECCeEE
Confidence 888888776543 788889999999999999998 78999999999999999999999999999
Q ss_pred EEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCC
Q psy14927 973 GASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG 1052 (1074)
Q Consensus 973 ~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~ 1052 (1074)
++..+++++.+.+.+.. +|+..++++|.||+|+|++|+++++++...|++++++|+|.||++++|++|||||+|||++.
T Consensus 264 ~i~~~~~~~~v~~~~~~-~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~ 342 (491)
T 3urh_A 264 GAVKSGDGAKVTFEPVK-GGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGDVVRG 342 (491)
T ss_dssp EEEEETTEEEEEEEETT-SCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGSSS
T ss_pred EEEEeCCEEEEEEEecC-CCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCCCCCCEEEEEecCCC
Confidence 99988777778777522 25457899999999999999999877788899999999999999999999999999999998
Q ss_pred CCcHHHHHHHHHHHHHHhhCC
Q psy14927 1053 PMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1053 ~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
|+++..|..+|+.+|.+|+|.
T Consensus 343 ~~~~~~A~~~g~~aa~~i~g~ 363 (491)
T 3urh_A 343 PMLAHKAEDEGVAVAEIIAGQ 363 (491)
T ss_dssp CCCHHHHHHHHHHHHHHHTTS
T ss_pred ccchhHHHHHHHHHHHHHcCC
Confidence 999999999999999999975
No 2
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.98 E-value=2.3e-31 Score=317.70 Aligned_cols=276 Identities=62% Similarity=0.904 Sum_probs=222.3
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccch--------------------------------------
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNL-------------------------------------- 830 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~-------------------------------------- 830 (1074)
+.+|+||||||+|+++|..|++ +++|+.+..|+....
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 85 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNL 85 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccCH
Confidence 3459999999999999999998 788888766664211
Q ss_pred hhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCC--CCCCCCCCc
Q psy14927 831 ETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTP--FPGIEVDEE 908 (1074)
Q Consensus 831 ~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~--ipgi~~~~~ 908 (1074)
..+..+.....+.+...+...+.+.||+++.|+++.++++.+.|.+.+|+..++.||+||||||++|.. +||+ +..
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~g~--~~~ 163 (474)
T 1zmd_A 86 DKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITI--DED 163 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTCCC--CSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCCCC--CcC
Confidence 111111111122233334667778899999999888998888888777433579999999999998743 3343 233
Q ss_pred ceechhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCC-CCCHHHHHHHHHHHHhCCCEEEeCce
Q psy14927 909 TIVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGM-GIDGEVAKQFQRILGKQGMQFKLGTK 970 (1074)
Q Consensus 909 ~v~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~-~~~~~~~~~~~~~l~~~gV~i~~~~~ 970 (1074)
.++++++++.+.. |..+.++|.+||++++.++++ + .+++++.+.+.+.+++.||++++++.
T Consensus 164 ~v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~~~~~~~~~~~l~~~l~~~Gv~i~~~~~ 242 (474)
T 1zmd_A 164 TIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVG-GVGIDMEISKNFQRILQKQGFKFKLNTK 242 (474)
T ss_dssp SEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-CSSCCHHHHHHHHHHHHHTTCEEECSEE
T ss_pred cEEcHHHHhhccccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccC-CcccCHHHHHHHHHHHHHCCCEEEeCce
Confidence 5788888876543 888889999999999999998 6 89999999999999999999999999
Q ss_pred EEEEEecCCe-EEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEeccc
Q psy14927 971 VTGASKSGDN-ITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDC 1049 (1074)
Q Consensus 971 v~~i~~~~~~-~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~ 1049 (1074)
|.++..++++ +.+++.+.. ++.+.++++|.||+|+|++|+++++.++.+|++++++|+|.||++++|+.|+|||+|||
T Consensus 243 v~~i~~~~~~~~~v~~~~~~-~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~ 321 (474)
T 1zmd_A 243 VTGATKKSDGKIDVSIEAAS-GGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDV 321 (474)
T ss_dssp EEEEEECTTSCEEEEEEETT-SCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBCSSTTEEECGGG
T ss_pred EEEEEEcCCceEEEEEEecC-CCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCccCCCCEEEeeec
Confidence 9999987655 666654311 24467899999999999999999866678899999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1050 IHGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1050 ~~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
+..|++++.|..||+.||.||++.
T Consensus 322 ~~~~~~~~~A~~~g~~aa~~i~~~ 345 (474)
T 1zmd_A 322 VAGPMLAHKAEDEGIICVEGMAGG 345 (474)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHTTC
T ss_pred CCCCccHHHHHHHHHHHHHHhcCC
Confidence 998889999999999999999974
No 3
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.98 E-value=2e-31 Score=317.74 Aligned_cols=274 Identities=43% Similarity=0.678 Sum_probs=221.4
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccccch--------------------------------------h
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNL--------------------------------------E 831 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~--------------------------------------~ 831 (1074)
.+|+||||||+|+++|..|++ +++|+.+..|+.... .
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDSA 82 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCHH
Confidence 359999999999999999998 788888766654211 1
Q ss_pred hhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCC--CCCCCCCCcc
Q psy14927 832 TMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTP--FPGIEVDEET 909 (1074)
Q Consensus 832 ~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~--ipgi~~~~~~ 909 (1074)
.+..+.....+.+...+...+.+.||+++.|+++.++++.+.|.+.+|...++.||+||||||++|.. +|++ +...
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~g~--~~~~ 160 (468)
T 2qae_A 83 KMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPF--DEKV 160 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTBCC--CSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCCCC--CcCc
Confidence 11111111222233334566777899999999888999988888877755679999999999998743 3343 2336
Q ss_pred eechhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHH-HhCCCEEEeCceE
Q psy14927 910 IVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRIL-GKQGMQFKLGTKV 971 (1074)
Q Consensus 910 v~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l-~~~gV~i~~~~~v 971 (1074)
++++++++.+.. |..+.+.|.+||++++.++++ +.+++++.+.+.+.+ ++.||+++++++|
T Consensus 161 v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~~~d~~~~~~l~~~l~~~~gv~i~~~~~v 239 (468)
T 2qae_A 161 VLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA-PTLDEDVTNALVGALAKNEKMKFMTSTKV 239 (468)
T ss_dssp EECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-TTSCHHHHHHHHHHHHHHTCCEEECSCEE
T ss_pred eechHHHhhcccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc-ccCCHHHHHHHHHHHhhcCCcEEEeCCEE
Confidence 888888877633 888889999999999999998 789999999999999 9999999999999
Q ss_pred EEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCC
Q psy14927 972 TGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIH 1051 (1074)
Q Consensus 972 ~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~ 1051 (1074)
.+++.+++++.+.+.+. +|++.++++|.||+|+|++|+++++.++.+|++++++|+|.||++++|+.|||||+|||+.
T Consensus 240 ~~i~~~~~~~~v~~~~~--~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~ 317 (468)
T 2qae_A 240 VGGTNNGDSVSLEVEGK--NGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYAIGDVVD 317 (468)
T ss_dssp EEEEECSSSEEEEEECC-----EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGBS
T ss_pred EEEEEcCCeEEEEEEcC--CCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcccCCCCEEEeeccCC
Confidence 99998766666776521 1434789999999999999999987667889999989999999999999999999999999
Q ss_pred -CCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1052 -GPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1052 -~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
.|++++.|..||+.||.||++.
T Consensus 318 ~~~~~~~~A~~~g~~aa~~i~~~ 340 (468)
T 2qae_A 318 KGPMLAHKAEDEGVACAEILAGK 340 (468)
T ss_dssp SSCSCHHHHHHHHHHHHHHHTTC
T ss_pred CCCccHhHHHHHHHHHHHHHcCC
Confidence 8889999999999999999874
No 4
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=3.5e-31 Score=316.00 Aligned_cols=276 Identities=46% Similarity=0.705 Sum_probs=221.8
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccch-------------------------------------h
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNL-------------------------------------E 831 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~-------------------------------------~ 831 (1074)
+.+|+||||||+|+++|..|++ +++|+.+..|+.... .
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLA 85 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 4459999999999999999998 788888766654211 1
Q ss_pred hhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCC--CCCCCCCCcc
Q psy14927 832 TMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTP--FPGIEVDEET 909 (1074)
Q Consensus 832 ~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~--ipgi~~~~~~ 909 (1074)
.+..+.......+...+...+.+.||+++.|+++.++++.+.|.+.+|...+++||+||||||++|.. +|++ +...
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g~--~~~~ 163 (470)
T 1dxl_A 86 AMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTI--DEKK 163 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBCC--CSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCC--Cccc
Confidence 11111111112233334556677799999998888888888887766644579999999999998743 3333 2336
Q ss_pred eechhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEE
Q psy14927 910 IVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVT 972 (1074)
Q Consensus 910 v~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~ 972 (1074)
++++.+++.+.. |..|.+.|.+||++++.++++ +.+++++.+.+.+.+++.||++++++.|.
T Consensus 164 v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-~~~~~~~~~~l~~~l~~~gv~i~~~~~v~ 242 (470)
T 1dxl_A 164 IVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV-PTMDAEIRKQFQRSLEKQGMKFKLKTKVV 242 (470)
T ss_dssp EECHHHHTTCSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS-TTSCHHHHHHHHHHHHHSSCCEECSEEEE
T ss_pred EEeHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-ccccHHHHHHHHHHHHHcCCEEEeCCEEE
Confidence 888888876543 778888999999999999998 78999999999999999999999999999
Q ss_pred EEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCC
Q psy14927 973 GASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG 1052 (1074)
Q Consensus 973 ~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~ 1052 (1074)
++..+++++.+++.+.. +|++.++++|.||+|+|++|+++++.++.+|++++++|+|.||++++|+.|+|||+|||+..
T Consensus 243 ~i~~~~~~~~v~~~~~~-~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~ 321 (470)
T 1dxl_A 243 GVDTSGDGVKLTVEPSA-GGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVIPG 321 (470)
T ss_dssp EEECSSSSEEEEEEESS-SCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBCSSTTEEECSTTSSS
T ss_pred EEEEcCCeEEEEEEecC-CCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEEeccCCC
Confidence 99986656667766321 24457899999999999999999876788899999899999999999999999999999998
Q ss_pred CCcHHHHHHHHHHHHHHhhCC
Q psy14927 1053 PMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1053 ~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
|++++.|..+|+.||.||++.
T Consensus 322 ~~~~~~A~~~g~~aa~~i~g~ 342 (470)
T 1dxl_A 322 PMLAHKAEEDGVACVEYLAGK 342 (470)
T ss_dssp CCCHHHHHHHHHHHHHHHTTS
T ss_pred CccHHHHHHHHHHHHHHHcCC
Confidence 889999999999999999874
No 5
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.97 E-value=2.2e-31 Score=319.09 Aligned_cols=270 Identities=26% Similarity=0.315 Sum_probs=228.0
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhcc--------cccc------------------------------------
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAG--------DKGV------------------------------------ 826 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~--------~~g~------------------------------------ 826 (1074)
+|+||||||+|+.||..+++ .++|+.. ..||
T Consensus 44 DviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~~~ 123 (542)
T 4b1b_A 44 DYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKFDN 123 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCcccCc
Confidence 59999999999999999998 5666422 1222
Q ss_pred -ccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCC--CCeeEEEcCeEEEccCCCCCCCCCC
Q psy14927 827 -KLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSD--GSTEEVKTKNILIATGSEVTPFPGI 903 (1074)
Q Consensus 827 -~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~--G~~~~i~~d~lIIATG~~p~~ipgi 903 (1074)
.++|..+..+.....+.+...+...+++.||+++.|.+.+++++.+.|...+ ++.+++++|++|||||++|..+|.+
T Consensus 124 ~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~~P~~~ 203 (542)
T 4b1b_A 124 LKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIPDDV 203 (542)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEECCCSSS
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCCCCCcc
Confidence 1244555555555666666667788889999999999999999999887653 3447899999999999999766667
Q ss_pred CCCCcceechhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEE
Q psy14927 904 EVDEETIVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFK 966 (1074)
Q Consensus 904 ~~~~~~v~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~ 966 (1074)
++....++|+++++.+.+ |..|+++|.+||++.+ ++++ +.+++++...+.+.|++.||.++
T Consensus 204 ~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~-~~~L-~~~D~ei~~~l~~~l~~~gi~~~ 281 (542)
T 4b1b_A 204 EGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVL-RGFDQQCAVKVKLYMEEQGVMFK 281 (542)
T ss_dssp BTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEES-SCSS-TTSCHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCccccCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecc-cccc-cccchhHHHHHHHHHHhhcceee
Confidence 666678899999998876 9999999999999987 4667 78999999999999999999999
Q ss_pred eCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCe-eeCCCCCCCCCCEEE
Q psy14927 967 LGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRV-PVNSRFQTVIPNIFA 1045 (1074)
Q Consensus 967 ~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I-~Vd~~~~ts~~~IyA 1045 (1074)
++..+.++...++.+.|.+.+ +.++.+|.|++|+|++||++.++++..|+.++..|.+ .||++++||+|||||
T Consensus 282 ~~~~v~~~~~~~~~~~v~~~~------~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~Ts~p~IyA 355 (542)
T 4b1b_A 282 NGILPKKLTKMDDKILVEFSD------KTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFA 355 (542)
T ss_dssp ETCCEEEEEEETTEEEEEETT------SCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBCSSTTEEE
T ss_pred cceEEEEEEecCCeEEEEEcC------CCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccccCCCeEE
Confidence 999999999988877777654 4568899999999999999999999999999887665 788999999999999
Q ss_pred ecccCCC-CCcHHHHHHHHHHHHHHhhCC
Q psy14927 1046 IGDCIHG-PMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1046 iGD~~~~-~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
+|||+++ |.+++.|..+|++++.||++.
T Consensus 356 iGDv~~~~p~La~~A~~eg~~aa~~i~g~ 384 (542)
T 4b1b_A 356 VGDVAENVPELAPVAIKAGEILARRLFKD 384 (542)
T ss_dssp CTTSBTTCCCCHHHHHHHHHHHHHHHHSC
T ss_pred eccccCCchhHHHHHHHHHHHHHHHHhcC
Confidence 9999965 789999999999999999974
No 6
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.97 E-value=3.5e-31 Score=316.53 Aligned_cols=278 Identities=47% Similarity=0.714 Sum_probs=224.1
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccch--------------------------------------
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNL-------------------------------------- 830 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~-------------------------------------- 830 (1074)
+.+|+||||||+|+++|..|++ +++|+.+..|+....
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 3459999999999999999998 788886666553211
Q ss_pred hhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeE------EEcCeEEEccCCCCCCCCCCC
Q psy14927 831 ETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEE------VKTKNILIATGSEVTPFPGIE 904 (1074)
Q Consensus 831 ~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~------i~~d~lIIATG~~p~~ipgi~ 904 (1074)
..+..+.......+...+...+.+.||+++.|++..++++.+.|.+.+|...+ +.||+||||||++|+.+|+++
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~~~g~~ 164 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFPGIE 164 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECCCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCCCCCCC
Confidence 11111111122223333456677889999999887788888888877763235 999999999999987788876
Q ss_pred CCCcceechhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEe
Q psy14927 905 VDEETIVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKL 967 (1074)
Q Consensus 905 ~~~~~v~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~ 967 (1074)
..+..++++++++.+.. |..|++.|.+||++++.++++ +.+++++.+.+.+.+++.||++++
T Consensus 165 ~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~~~~~~~~~~l~~~l~~~gv~i~~ 243 (478)
T 1v59_A 165 IDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIG-ASMDGEVAKATQKFLKKQGLDFKL 243 (478)
T ss_dssp CCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-SSSCHHHHHHHHHHHHHTTCEEEC
T ss_pred CCCceEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccc-cccCHHHHHHHHHHHHHCCCEEEe
Confidence 44446888888887643 888899999999999999998 689999999999999999999999
Q ss_pred CceEEEEEe--cCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEE
Q psy14927 968 GTKVTGASK--SGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFA 1045 (1074)
Q Consensus 968 ~~~v~~i~~--~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyA 1045 (1074)
++.|+++.. +++.+.+.+.+.. +|.+.++++|.||+|+|++|+++.+.++.+|++++++|+|.||++++|+.|||||
T Consensus 244 ~~~v~~i~~~~~~~~~~v~~~~~~-~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA 322 (478)
T 1v59_A 244 STKVISAKRNDDKNVVEIVVEDTK-TNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKV 322 (478)
T ss_dssp SEEEEEEEEETTTTEEEEEEEETT-TTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTTSBCSSTTEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEEcC-CCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECcCCccCCCCEEE
Confidence 999999987 5556667766321 2446789999999999999999844378889999999999999999999999999
Q ss_pred ecccCCCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1046 IGDCIHGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1046 iGD~~~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
+|||+..|++++.|..||+.||.||++.
T Consensus 323 ~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 350 (478)
T 1v59_A 323 VGDVTFGPMLAHKAEEEGIAAVEMLKTG 350 (478)
T ss_dssp CGGGSSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred eeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 9999998889999999999999999864
No 7
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.97 E-value=6.2e-31 Score=314.23 Aligned_cols=275 Identities=39% Similarity=0.612 Sum_probs=227.9
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccc------ccccc-----------------------------------
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGD------KGVKL----------------------------------- 828 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~------~g~~~----------------------------------- 828 (1074)
.+|+||||||+|+++|+.|++ +++|+.+. .|+..
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~~~ 83 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTGEV 83 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 459999999999999999998 78888752 23211
Q ss_pred --chhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCC
Q psy14927 829 --NLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVD 906 (1074)
Q Consensus 829 --~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~ 906 (1074)
++..+........+.+...+...+...||+++.++++.+++..+.|.+.+|...++.||+||||||++|..+|+.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~~~~~ 163 (476)
T 3lad_A 84 AIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAPVD 163 (476)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCCTTSCCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCCCCCC
Confidence 111112222222333334455667778999999999999999999988888666899999999999998666666656
Q ss_pred CcceechhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCc
Q psy14927 907 EETIVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGT 969 (1074)
Q Consensus 907 ~~~v~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~ 969 (1074)
...++++.+++.... |..+.+.|.+||++++.++++ +.+++++.+.+.+.|++.||++++++
T Consensus 164 ~~~v~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~~~~~~~~~~l~~~l~~~Gv~v~~~~ 242 (476)
T 3lad_A 164 QDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL-PAVDEQVAKEAQKILTKQGLKILLGA 242 (476)
T ss_dssp SSSEEEHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-TTSCHHHHHHHHHHHHHTTEEEEETC
T ss_pred cccEEechhhhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC-cccCHHHHHHHHHHHHhCCCEEEECC
Confidence 677888888877543 788889999999999999999 78999999999999999999999999
Q ss_pred eEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEeccc
Q psy14927 970 KVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDC 1049 (1074)
Q Consensus 970 ~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~ 1049 (1074)
.|.+++.+++++.+.+.+.+ | ..++++|.||+|+|++|+++++.++..|++++++|+|.||++++|++|||||+|||
T Consensus 243 ~v~~i~~~~~~~~v~~~~~~--g-~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~ 319 (476)
T 3lad_A 243 RVTGTEVKNKQVTVKFVDAE--G-EKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIGDV 319 (476)
T ss_dssp EEEEEEECSSCEEEEEESSS--E-EEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBCSSTTEEECGGG
T ss_pred EEEEEEEcCCEEEEEEEeCC--C-cEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCcccCCCCEEEEEcc
Confidence 99999987777777777521 2 36899999999999999998766788999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1050 IHGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1050 ~~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
++.|.+++.|..+|+.+|.||+|.
T Consensus 320 ~~~~~~~~~A~~~g~~aa~~i~g~ 343 (476)
T 3lad_A 320 VRGAMLAHKASEEGVVVAERIAGH 343 (476)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCcccHHHHHHHHHHHHHHhcCC
Confidence 998889999999999999999874
No 8
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.97 E-value=6.4e-31 Score=312.68 Aligned_cols=270 Identities=37% Similarity=0.564 Sum_probs=217.3
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhcccccccc-----------------------------------chhhhh
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL-----------------------------------NLETMM 834 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~-----------------------------------~~~~~~ 834 (1074)
.+|+||||||||+++|..+++ +++|+.+ .|+.. ++..+.
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 85 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLG 85 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHHH
Confidence 459999999999999999998 7888765 44321 111222
Q ss_pred hhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCCcceechh
Q psy14927 835 GTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVSST 914 (1074)
Q Consensus 835 ~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~~~v~t~~ 914 (1074)
.+.....+.+...+...+++.||+++.|+++.+++..+.+ . | .++.||+||||||++|..+|++++. ..+++++
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v--~-g--~~~~~d~lViATGs~p~~p~gi~~~-~~v~~~~ 159 (464)
T 2eq6_A 86 GWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEV--G-G--ERYGAKSLILATGSEPLELKGFPFG-EDVWDST 159 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEE--T-T--EEEEEEEEEECCCEEECCBTTBCCS-SSEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEE--c-c--EEEEeCEEEEcCCCCCCCCCCCCCC-CcEEcHH
Confidence 2222222233333456677789999999888888765544 4 5 5899999999999998655566653 3578888
Q ss_pred hHhcchH------------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEe
Q psy14927 915 GALSLKK------------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASK 976 (1074)
Q Consensus 915 ~~~~~~~------------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~ 976 (1074)
+++.+.. |..|+++|.+||++++.++++ +.+++++.+.+.+.+++.||++++++.|++++.
T Consensus 160 ~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~ 238 (464)
T 2eq6_A 160 RALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL-PQGDPETAALLRRALEKEGIRVRTKTKAVGYEK 238 (464)
T ss_dssp HHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-TTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEE
T ss_pred HHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc-cccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEE
Confidence 8876543 888889999999999999998 789999999999999999999999999999998
Q ss_pred cCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCCCcH
Q psy14927 977 SGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLA 1056 (1074)
Q Consensus 977 ~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~~~~ 1056 (1074)
+++++.+++.+.. +|+..++++|.||+|+|++|+++++.++..|++++++|+|.||++++|+.|+|||+|||+..|+++
T Consensus 239 ~~~~~~v~~~~~~-~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~l~ 317 (464)
T 2eq6_A 239 KKDGLHVRLEPAE-GGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLA 317 (464)
T ss_dssp ETTEEEEEEEETT-CCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGTCSSCCH
T ss_pred eCCEEEEEEeecC-CCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCEEEEeccCCCcccH
Confidence 7667777766310 144458999999999999999998666788999988999999999999999999999999988899
Q ss_pred HHHHHHHHHHHHHhhCC
Q psy14927 1057 HKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1057 ~~A~~~G~~aA~~I~~~ 1073 (1074)
+.|..||+.+|.||++.
T Consensus 318 ~~A~~~g~~aa~~i~g~ 334 (464)
T 2eq6_A 318 HKAMREGLIAAENAAGK 334 (464)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 99999999999999874
No 9
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=1.1e-30 Score=310.26 Aligned_cols=272 Identities=35% Similarity=0.517 Sum_probs=219.4
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhcccccccc------------------------------------chhhh
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL------------------------------------NLETM 833 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~------------------------------------~~~~~ 833 (1074)
.+|+||||||+|+++|..|++ +++|+. ..|+.. ++..+
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 82 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAKV 82 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHHH
Confidence 459999999999999999998 788876 444321 11112
Q ss_pred hhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCCcceech
Q psy14927 834 MGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVSS 913 (1074)
Q Consensus 834 ~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~~~v~t~ 913 (1074)
........+.+...+...+.+.||+++.|+++.++++.+.|.+.+|. .++.||+||||||++|..+| +++....++++
T Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~-~~i~~d~lViATGs~p~~~~-~~g~~~~v~~~ 160 (455)
T 1ebd_A 83 QEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSA-QTYTFKNAIIATGSRPIELP-NFKFSNRILDS 160 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEE-EEEECSEEEECCCEEECCBT-TBCCCSSEECH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCc-EEEEeCEEEEecCCCCCCCC-CCCccceEecH
Confidence 22222222334444566777889999999888899888888877652 57999999999999874332 22222237888
Q ss_pred hhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEe
Q psy14927 914 TGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASK 976 (1074)
Q Consensus 914 ~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~ 976 (1074)
.+++.+.. |..|.+.|.+||++++.++++ +.+++++.+.+.+.+++.||++++++.|.++.+
T Consensus 161 ~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~ 239 (455)
T 1ebd_A 161 TGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL-SGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEE 239 (455)
T ss_dssp HHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-TTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEE
T ss_pred HHHhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-cccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEE
Confidence 88776543 888889999999999999998 789999999999999999999999999999998
Q ss_pred cCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCCCcH
Q psy14927 977 SGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLA 1056 (1074)
Q Consensus 977 ~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~~~~ 1056 (1074)
+++++.+++.+ +|.+.++++|.||+|+|++|++++++++.+|++++++|+|.||++++|+.|+|||+|||+..|+++
T Consensus 240 ~~~~~~v~~~~---~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~~~ 316 (455)
T 1ebd_A 240 REDGVTVTYEA---NGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPGPALA 316 (455)
T ss_dssp ETTEEEEEEEE---TTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTEEECGGGSSSCCCH
T ss_pred eCCeEEEEEEe---CCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCEEEEeccCCCcccH
Confidence 76666676653 244678999999999999999998766888999999999999999999999999999999988899
Q ss_pred HHHHHHHHHHHHHhhCC
Q psy14927 1057 HKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1057 ~~A~~~G~~aA~~I~~~ 1073 (1074)
+.|..+|+.||.||++.
T Consensus 317 ~~A~~~g~~aa~~i~~~ 333 (455)
T 1ebd_A 317 HKASYEGKVAAEAIAGH 333 (455)
T ss_dssp HHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 99999999999999874
No 10
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.97 E-value=1.1e-30 Score=311.00 Aligned_cols=272 Identities=27% Similarity=0.373 Sum_probs=218.0
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhcccccccc------------------------------------chhhh
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL------------------------------------NLETM 833 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~------------------------------------~~~~~ 833 (1074)
.+|+||||||+|+++|..|++ +++|+. ..|+.. ++..+
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGIA 82 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHHH
Confidence 359999999999999999998 788876 343321 11111
Q ss_pred hhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCCcceech
Q psy14927 834 MGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVSS 913 (1074)
Q Consensus 834 ~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~~~v~t~ 913 (1074)
..+.......+...+.+.+.+.||+++.|+++.++++.+.|.+.+|...++.||+||+|||++|..+| +++....++++
T Consensus 83 ~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~-~~g~~~~~~~~ 161 (464)
T 2a8x_A 83 YDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVP-GTSLSANVVTY 161 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCT-TCCCBTTEECH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCC-CCCCCceEEec
Confidence 11111122223334556777789999999877788888888887774457999999999999874332 22222237888
Q ss_pred hhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEe
Q psy14927 914 TGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASK 976 (1074)
Q Consensus 914 ~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~ 976 (1074)
++++.+.. |..+.++|.+||++++.++++ +.+++++.+.+.+.|++.||++++++.|.++.+
T Consensus 162 ~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~ 240 (464)
T 2a8x_A 162 EEQILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-PNEDADVSKEIEKQFKKLGVTILTATKVESIAD 240 (464)
T ss_dssp HHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-TTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEE
T ss_pred HHHhhccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-cccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEE
Confidence 88776543 888889999999999999998 789999999999999999999999999999998
Q ss_pred cCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCCCcH
Q psy14927 977 SGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLA 1056 (1074)
Q Consensus 977 ~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~~~~ 1056 (1074)
+++++.+.+.+ +|++.++++|.||+|+|++||+++++++.+|++++++|+|.||+++||+.|||||+|||++.++++
T Consensus 241 ~~~~~~v~~~~---~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~ 317 (464)
T 2a8x_A 241 GGSQVTVTVTK---DGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGDVNGLLQLA 317 (464)
T ss_dssp CSSCEEEEEES---SSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTTEEECGGGGCSSCSH
T ss_pred cCCeEEEEEEc---CCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEeECcCCCccCH
Confidence 66666676652 244578999999999999999998766788999998999999999999999999999999988899
Q ss_pred HHHHHHHHHHHHHhhC
Q psy14927 1057 HKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 1057 ~~A~~~G~~aA~~I~~ 1072 (1074)
+.|..||+.+|.||++
T Consensus 318 ~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 318 HVAEAQGVVAAETIAG 333 (464)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999999997
No 11
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.97 E-value=1.2e-30 Score=312.55 Aligned_cols=277 Identities=23% Similarity=0.272 Sum_probs=222.7
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhh--------ccccccc---------------------------------
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQ--------AGDKGVK--------------------------------- 827 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~--------~~~~g~~--------------------------------- 827 (1074)
+.+|+||||||||+.||..+++ +++|+ ....||.
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~~ 85 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVA 85 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcccC
Confidence 4469999999999999999998 78885 2233431
Q ss_pred ----cchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCC
Q psy14927 828 ----LNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGI 903 (1074)
Q Consensus 828 ----~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi 903 (1074)
++|..+..+.......+...+...+...+|+++.++++++++..+.|.+.+|+..++.||+||||||++|..+|.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p~~i 165 (488)
T 3dgz_A 86 QPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQV 165 (488)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECCCSSC
T ss_pred CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCCCCCC
Confidence 2233333333334444444566677788999999999999999999988888667899999999999988432225
Q ss_pred CCCCcceechhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEE
Q psy14927 904 EVDEETIVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFK 966 (1074)
Q Consensus 904 ~~~~~~v~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~ 966 (1074)
++....++++++++.+.. |..|.++|.+||++++.. ++ +.+++++.+.+.+.|++.||+++
T Consensus 166 ~G~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~l-~~~d~~~~~~l~~~l~~~gv~~~ 243 (488)
T 3dgz_A 166 KGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI-PL-RGFDQQMSSLVTEHMESHGTQFL 243 (488)
T ss_dssp BTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SS-TTSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCcccccCcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-cc-ccCCHHHHHHHHHHHHHCCCEEE
Confidence 544456678888877554 888899999999999864 55 78999999999999999999999
Q ss_pred eCceEEEEEecC-CeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccC-CCCCeeeCCCCCCCCCCEE
Q psy14927 967 LGTKVTGASKSG-DNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKD-EKGRVPVNSRFQTVIPNIF 1044 (1074)
Q Consensus 967 ~~~~v~~i~~~~-~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld-~~G~I~Vd~~~~ts~~~Iy 1044 (1074)
+++.+.++...+ +.+.+++.+.. +|+..++++|.||+|+|++|+++++++...|++++ ++|+|.||++++|++||||
T Consensus 244 ~~~~v~~i~~~~~~~~~v~~~~~~-~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t~~~~Iy 322 (488)
T 3dgz_A 244 KGCVPSHIKKLPTNQLQVTWEDHA-SGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIY 322 (488)
T ss_dssp ETEEEEEEEECTTSCEEEEEEETT-TTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBCSSTTEE
T ss_pred eCCEEEEEEEcCCCcEEEEEEeCC-CCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCccCCCCEE
Confidence 999999998743 44667776622 23334689999999999999999877788999999 8999999999999999999
Q ss_pred EecccC-CCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1045 AIGDCI-HGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1045 AiGD~~-~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
|+|||+ ..|.+++.|..+|+++|.||++.
T Consensus 323 A~GD~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (488)
T 3dgz_A 323 AIGDVAEGRPELTPTAIKAGKLLAQRLFGK 352 (488)
T ss_dssp ECGGGBTTCCCCHHHHHHHHHHHHHHHHSC
T ss_pred EeEEecCCCCcchhHHHHHHHHHHHHHcCC
Confidence 999997 56788999999999999999974
No 12
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.97 E-value=1.1e-30 Score=312.43 Aligned_cols=276 Identities=32% Similarity=0.487 Sum_probs=220.8
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhcccccccc------------------------------------chhh
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL------------------------------------NLET 832 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~------------------------------------~~~~ 832 (1074)
+.+|+||||||+|+++|+.|++ +++|+.+..|+.. ++..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDM 85 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 3459999999999999999998 7888866655431 1111
Q ss_pred hhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCC----------CeeEEEcCeEEEccCCCCCCCCC
Q psy14927 833 MMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDG----------STEEVKTKNILIATGSEVTPFPG 902 (1074)
Q Consensus 833 ~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G----------~~~~i~~d~lIIATG~~p~~ipg 902 (1074)
+..........+...+...+...||+++.|+++.++++.+.+.+.+| +..+++||+||||||++|..+|+
T Consensus 86 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~~~~ 165 (482)
T 1ojt_A 86 LRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPF 165 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCCCCC
Confidence 11112222223333345667788999999988778888777765443 12579999999999999865554
Q ss_pred CCCCCcceechhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEE
Q psy14927 903 IEVDEETIVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQF 965 (1074)
Q Consensus 903 i~~~~~~v~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i 965 (1074)
++.+ ..++++++++.+.. |..|.++|.+||++++.++++ +.+++++.+.+.+.|++.||++
T Consensus 166 i~~~-~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l-~~~~~~~~~~l~~~l~~~gV~i 243 (482)
T 1ojt_A 166 IPED-PRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM-QGADRDLVKVWQKQNEYRFDNI 243 (482)
T ss_dssp CCCC-TTEECHHHHTTCCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS-TTSCHHHHHHHHHHHGGGEEEE
T ss_pred CCcc-CcEEcHHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-cccCHHHHHHHHHHHHhcCCEE
Confidence 5533 36888888887653 888889999999999999999 7899999999999999999999
Q ss_pred EeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEE
Q psy14927 966 KLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFA 1045 (1074)
Q Consensus 966 ~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyA 1045 (1074)
++++.|.+++.+++++.+++.+.. +.++++++|.||+|+|++||+++++++.+|++++++|+|.||++++|+.|+|||
T Consensus 244 ~~~~~v~~i~~~~~~~~v~~~~~~--~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA 321 (482)
T 1ojt_A 244 MVNTKTVAVEPKEDGVYVTFEGAN--APKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYA 321 (482)
T ss_dssp ECSCEEEEEEEETTEEEEEEESSS--CCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTSBCSSTTEEE
T ss_pred EECCEEEEEEEcCCeEEEEEeccC--CCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCcccCCCCEEE
Confidence 999999999987666677765411 224568999999999999999987678899999999999999999999999999
Q ss_pred ecccCCCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1046 IGDCIHGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1046 iGD~~~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
+|||+..|++++.|..||+.+|.||++.
T Consensus 322 ~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 349 (482)
T 1ojt_A 322 IGDIVGQPMLAHKAVHEGHVAAENCAGH 349 (482)
T ss_dssp CGGGTCSSCCHHHHHHHHHHHHHHHTTC
T ss_pred EEcccCCCccHHHHHHHHHHHHHHHcCC
Confidence 9999998889999999999999999974
No 13
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.97 E-value=2e-30 Score=312.35 Aligned_cols=276 Identities=21% Similarity=0.331 Sum_probs=220.5
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhcc--------ccccc---------------------------------
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAG--------DKGVK--------------------------------- 827 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~--------~~g~~--------------------------------- 827 (1074)
+.+|+||||||+|+.||+.+++ +++|+.+ ..||.
T Consensus 32 ~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~~ 111 (519)
T 3qfa_A 32 DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVE 111 (519)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcccC
Confidence 4569999999999999999998 7888743 33432
Q ss_pred ----cchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCC
Q psy14927 828 ----LNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGI 903 (1074)
Q Consensus 828 ----~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi 903 (1074)
++|..+..+.....+.+...+...++..+|+++.|+++++++..+.|.+.+|+..++.||+||||||++|. +|.+
T Consensus 112 ~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~-~p~i 190 (519)
T 3qfa_A 112 ETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPR-YLGI 190 (519)
T ss_dssp SSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEEC-CCCC
T ss_pred CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcC-CCCC
Confidence 22233333333334444445556777889999999999999999999888885568999999999999884 3345
Q ss_pred CCCCcceechhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEE
Q psy14927 904 EVDEETIVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFK 966 (1074)
Q Consensus 904 ~~~~~~v~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~ 966 (1074)
++....++++++++.+.. |..|.++|.+||++++. .++ +.+++++.+.+.+.|++.||+++
T Consensus 191 ~G~~~~~~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l-~~~d~~~~~~~~~~l~~~GV~v~ 268 (519)
T 3qfa_A 191 PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILL-RGFDQDMANKIGEHMEEHGIKFI 268 (519)
T ss_dssp TTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSS-TTSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCccCceEcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-ccc-ccCCHHHHHHHHHHHHHCCCEEE
Confidence 554556778888876554 88889999999999985 666 78999999999999999999999
Q ss_pred eCceEEEEEecC----CeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccC-CCCCeeeCCCCCCCCC
Q psy14927 967 LGTKVTGASKSG----DNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKD-EKGRVPVNSRFQTVIP 1041 (1074)
Q Consensus 967 ~~~~v~~i~~~~----~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld-~~G~I~Vd~~~~ts~~ 1041 (1074)
+++.+.++...+ +.+.+++...+ .++..++++|.||+++|++|++++++++..|++++ ++|+|.||++++|++|
T Consensus 269 ~~~~v~~v~~~~~~~~~~~~v~~~~~~-g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~Ts~~ 347 (519)
T 3qfa_A 269 RQFVPIKVEQIEAGTPGRLRVVAQSTN-SEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVP 347 (519)
T ss_dssp ESEEEEEEEEEECCTTCEEEEEEEESS-SSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSBCSST
T ss_pred eCCeEEEEEEccCCCCceEEEEEEECC-CcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCccCCC
Confidence 998888877532 34556655422 12225789999999999999999877888999998 6899999999999999
Q ss_pred CEEEecccC-CCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1042 NIFAIGDCI-HGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1042 ~IyAiGD~~-~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
||||+|||+ +.|.+++.|..+|+++|.||++.
T Consensus 348 ~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g~ 380 (519)
T 3qfa_A 348 YIYAIGDILEDKVELTPVAIQAGRLLAQRLYAG 380 (519)
T ss_dssp TEEECGGGBSSSCCCHHHHHHHHHHHHHHHHSC
T ss_pred CEEEEEeccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 999999998 56889999999999999999974
No 14
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.4e-30 Score=308.93 Aligned_cols=271 Identities=21% Similarity=0.266 Sum_probs=215.6
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhcccccccc----------------------------------------
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL---------------------------------------- 828 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~---------------------------------------- 828 (1074)
+.+|+||||||+|+++|+.|++ +++|+. ..|+..
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 89 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHL 89 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGGC
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccccC
Confidence 3459999999999999999998 788876 334321
Q ss_pred --chhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCC
Q psy14927 829 --NLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVD 906 (1074)
Q Consensus 829 --~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~ 906 (1074)
++..+..........+...+...+...||+++.++++.+++..+.|.+.+|...++.||+||||||++|..++.+++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~i~g~ 169 (479)
T 2hqm_A 90 TFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIPGF 169 (479)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTTSTTG
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCCCCCc
Confidence 111111122222233334455667788999999999999988888888777434799999999999987422134433
Q ss_pred CcceechhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCc
Q psy14927 907 EETIVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGT 969 (1074)
Q Consensus 907 ~~~v~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~ 969 (1074)
..++++++++.+.. |..|.++|.+||++++.++++ +.+++++.+.+.+.|++.||++++++
T Consensus 170 -~~~~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-~~~d~~~~~~l~~~l~~~Gv~i~~~~ 247 (479)
T 2hqm_A 170 -ELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL-RKFDECIQNTITDHYVKEGINVHKLS 247 (479)
T ss_dssp -GGSBCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC-TTSCHHHHHHHHHHHHHHTCEEECSC
T ss_pred -ccccchHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc-cccCHHHHHHHHHHHHhCCeEEEeCC
Confidence 34677777766542 888889999999999999998 78999999999999999999999999
Q ss_pred eEEEEEecCCe--EEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEec
Q psy14927 970 KVTGASKSGDN--ITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIG 1047 (1074)
Q Consensus 970 ~v~~i~~~~~~--~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiG 1047 (1074)
.|+++..++++ +.|++.+ |+ .++++|.||+|+|++|++. +.++..|++++++|+|.||++++|+.|+|||+|
T Consensus 248 ~v~~i~~~~~~~~~~v~~~~----G~-~~i~~D~vv~a~G~~p~~~-l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~G 321 (479)
T 2hqm_A 248 KIVKVEKNVETDKLKIHMND----SK-SIDDVDELIWTIGRKSHLG-MGSENVGIKLNSHDQIIADEYQNTNVPNIYSLG 321 (479)
T ss_dssp CEEEEEECC-CCCEEEEETT----SC-EEEEESEEEECSCEEECCC-SSGGGGTCCBCTTSCBCCCTTCBCSSTTEEECG
T ss_pred EEEEEEEcCCCcEEEEEECC----Cc-EEEEcCEEEECCCCCCccc-cChhhcCceECCCCCEeECCCCccCCCCEEEEE
Confidence 99999875444 5666543 32 6899999999999999994 446788999999999999999999999999999
Q ss_pred ccCCCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1048 DCIHGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1048 D~~~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
||++.|.++..|..+|+.+|.||++.
T Consensus 322 D~~~~~~~~~~A~~~g~~aa~~i~~~ 347 (479)
T 2hqm_A 322 DVVGKVELTPVAIAAGRKLSNRLFGP 347 (479)
T ss_dssp GGTTSSCCHHHHHHHHHHHHHHHHSC
T ss_pred ecCCCcccHHHHHHHHHHHHHHhcCC
Confidence 99988889999999999999999874
No 15
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.97 E-value=3.5e-30 Score=309.31 Aligned_cols=268 Identities=22% Similarity=0.306 Sum_probs=215.6
Q ss_pred hhhhhccccchHHHHHHHhh--------hhhhhcccccccc--------------------------------------c
Q psy14927 796 VVLNTLGNCAAVQANYHLAT--------KLFTQAGDKGVKL--------------------------------------N 829 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~--------~l~e~~~~~g~~~--------------------------------------~ 829 (1074)
+||||||||+|+++|+.|++ +++|+.+ .|+.. +
T Consensus 4 dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 82 (499)
T 1xdi_A 4 RIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKIS 82 (499)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CBC
T ss_pred CEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCccC
Confidence 49999999999999999987 4677665 44321 1
Q ss_pred hhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecC------CeEEEEeCCCCeeEEEcCeEEEccCCCCCC--CC
Q psy14927 830 LETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGP------NTVTVIKSDGSTEEVKTKNILIATGSEVTP--FP 901 (1074)
Q Consensus 830 ~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~------~~~~v~~~~G~~~~i~~d~lIIATG~~p~~--ip 901 (1074)
+..+..+.......+...+.+.+.+.||+++.++++.+++ +.+.|.+.+|+..++.||+||||||++|.. +|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p~i~ 162 (499)
T 1xdi_A 83 LPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILPSA 162 (499)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCCC
Confidence 2222222222223344445677788899999999999988 667777777732379999999999998743 34
Q ss_pred CCCCCCcceechhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCE
Q psy14927 902 GIEVDEETIVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQ 964 (1074)
Q Consensus 902 gi~~~~~~v~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~ 964 (1074)
++ +...++++.+++.+.. |..+.++|.+||++++.++++ +.+++++...+.+.+++.||+
T Consensus 163 g~--~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-~~~d~~~~~~l~~~l~~~GV~ 239 (499)
T 1xdi_A 163 QP--DGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL-PYEDADAALVLEESFAERGVR 239 (499)
T ss_dssp CC--CSSSEEEGGGGGGCSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS-CCSSHHHHHHHHHHHHHTTCE
T ss_pred CC--CcCcEEehhHhhhhhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-cccCHHHHHHHHHHHHHCCCE
Confidence 43 2335778877776533 778889999999999999999 679999999999999999999
Q ss_pred EEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEE
Q psy14927 965 FKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIF 1044 (1074)
Q Consensus 965 i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~Iy 1044 (1074)
+++++.|+++..+++++.+++.+ +.++++|.||+|+|++|++++++++.+|++++++|+|.||++++|+.|+||
T Consensus 240 i~~~~~V~~i~~~~~~v~v~~~~------g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t~~~~Iy 313 (499)
T 1xdi_A 240 LFKNARAASVTRTGAGVLVTMTD------GRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIY 313 (499)
T ss_dssp EETTCCEEEEEECSSSEEEEETT------SCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSBCSSTTEE
T ss_pred EEeCCEEEEEEEeCCEEEEEECC------CcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCcccCCCCEE
Confidence 99999999999866555555322 468999999999999999998767888999999999999999999999999
Q ss_pred EecccCCCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1045 AIGDCIHGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1045 AiGD~~~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
|+|||++.+++++.|..+|+.+|.||+|.
T Consensus 314 A~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 314 AAGDCTGLLPLASVAAMQGRIAMYHALGE 342 (499)
T ss_dssp ECSGGGTSCSCHHHHHHHHHHHHHHHTTC
T ss_pred EEeccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 99999998889999999999999999975
No 16
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.97 E-value=4e-30 Score=307.92 Aligned_cols=269 Identities=26% Similarity=0.375 Sum_probs=214.2
Q ss_pred chhhhhhccccchHHHHHHHhh------hhhh--------hcccccccc-------------------------------
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT------KLFT--------QAGDKGVKL------------------------------- 828 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~------~l~e--------~~~~~g~~~------------------------------- 828 (1074)
+.+|+||||||+|+++|+.+++ +++| +....|+..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 3459999999999999999976 5888 244455432
Q ss_pred -------chhhhhhhhhHHHhhhhhhHHHHhhhC-CeEEEeeeEEEecCCeEEEEeC-C-----CCeeEEEcCeEEEccC
Q psy14927 829 -------NLETMMGTKSAAVKALTGGIAHLFKSN-KVTQLNGHGKITGPNTVTVIKS-D-----GSTEEVKTKNILIATG 894 (1074)
Q Consensus 829 -------~~~~~~~~~~~~~~~l~~~~~~~l~~~-gV~~~~g~v~~id~~~~~v~~~-~-----G~~~~i~~d~lIIATG 894 (1074)
+|..+..+.......+...+...+.+. ||+++.|+++++++..+.+... + | .++.||+||||||
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~--~~~~~d~lViATG 164 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVK--ERLQADHILLATG 164 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEE--EEEEEEEEEECCC
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCC--eEEEcCEEEEeCC
Confidence 122222222223333444455667788 9999999999998876665421 2 3 6799999999999
Q ss_pred CCCCCCCCCCCCCcceechhhHhcchH-----------------hhHHhhc---CCcEEEEecCCccCCCCCCHHHHHHH
Q psy14927 895 SEVTPFPGIEVDEETIVSSTGALSLKK-----------------GSVWGRL---GAEVTAIEFMNAIGGMGIDGEVAKQF 954 (1074)
Q Consensus 895 ~~p~~ipgi~~~~~~v~t~~~~~~~~~-----------------A~~l~~~---G~~Vtlv~~~~~~~~~~~~~~~~~~~ 954 (1074)
++|.. |.+++. ..++++++++.+.. |..|.++ |.+||++++.++++ +.+++++...+
T Consensus 165 s~p~~-p~i~G~-~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-~~~d~~~~~~l 241 (495)
T 2wpf_A 165 SWPQM-PAIPGI-EHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL-RGFDETIREEV 241 (495)
T ss_dssp EEECC-CCCTTG-GGCEEHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-TTSCHHHHHHH
T ss_pred CCcCC-CCCCCc-cccccHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-cccCHHHHHHH
Confidence 98742 334433 35778888877653 7888888 99999999999998 78999999999
Q ss_pred HHHHHhCCCEEEeCceEEEEEecCCe-EEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeC
Q psy14927 955 QRILGKQGMQFKLGTKVTGASKSGDN-ITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVN 1033 (1074)
Q Consensus 955 ~~~l~~~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd 1033 (1074)
.+.|++.||++++++.|.++..++++ +.|++.+ ++++++|.||+|+|++|+++++.++.+|++++++|+|.||
T Consensus 242 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~------G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd 315 (495)
T 2wpf_A 242 TKQLTANGIEIMTNENPAKVSLNTDGSKHVTFES------GKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVD 315 (495)
T ss_dssp HHHHHHTTCEEEESCCEEEEEECTTSCEEEEETT------SCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCC
T ss_pred HHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECC------CcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEEC
Confidence 99999999999999999999876543 5666543 3489999999999999999866578889999999999999
Q ss_pred CCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1034 SRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1034 ~~~~ts~~~IyAiGD~~~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
++++|+.|||||+|||++.+++++.|..+|+.+|.||++.
T Consensus 316 ~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 355 (495)
T 2wpf_A 316 EFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGN 355 (495)
T ss_dssp TTCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred CCCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999998889999999999999999974
No 17
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.97 E-value=5.6e-30 Score=306.42 Aligned_cols=270 Identities=25% Similarity=0.383 Sum_probs=215.7
Q ss_pred hhhhhhccccchHHHHHHHhh------hhhh--------hcccccccc--------------------------------
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT------KLFT--------QAGDKGVKL-------------------------------- 828 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~------~l~e--------~~~~~g~~~-------------------------------- 828 (1074)
.+|+||||||+|+++|+.+++ +++| +....|+..
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~ 83 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWELD 83 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEECC
T ss_pred ccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcccC
Confidence 359999999999999999976 6888 244455432
Q ss_pred ------chhhhhhhhhHHHhhhhhhHHHHhhhC-CeEEEeeeEEEecCCeEEEEe---CCCC-eeEEEcCeEEEccCCCC
Q psy14927 829 ------NLETMMGTKSAAVKALTGGIAHLFKSN-KVTQLNGHGKITGPNTVTVIK---SDGS-TEEVKTKNILIATGSEV 897 (1074)
Q Consensus 829 ------~~~~~~~~~~~~~~~l~~~~~~~l~~~-gV~~~~g~v~~id~~~~~v~~---~~G~-~~~i~~d~lIIATG~~p 897 (1074)
++..+..+.......+...+...+.+. ||+++.|+++.+++..+.+.. .+|. ..++.||+||||||++|
T Consensus 84 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAtGs~p 163 (490)
T 1fec_A 84 RESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWP 163 (490)
T ss_dssp GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCEEE
T ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeCCCCC
Confidence 222222222333334444566667788 999999999999988776654 2442 25799999999999987
Q ss_pred CCCCCCCCCCcceechhhHhcchH-----------------hhHHhhc---CCcEEEEecCCccCCCCCCHHHHHHHHHH
Q psy14927 898 TPFPGIEVDEETIVSSTGALSLKK-----------------GSVWGRL---GAEVTAIEFMNAIGGMGIDGEVAKQFQRI 957 (1074)
Q Consensus 898 ~~ipgi~~~~~~v~t~~~~~~~~~-----------------A~~l~~~---G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~ 957 (1074)
. +|.+++. ..++++++++.+.. |..|.++ |.+||++++.++++ +.+++++...+.+.
T Consensus 164 ~-~p~i~g~-~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-~~~d~~~~~~l~~~ 240 (490)
T 1fec_A 164 Q-HLGIEGD-DLCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL-RGFDSELRKQLTEQ 240 (490)
T ss_dssp C-CCCSBTG-GGCBCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-TTSCHHHHHHHHHH
T ss_pred C-CCCCCCc-cceecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-cccCHHHHHHHHHH
Confidence 4 3334433 35778888876653 7888888 99999999999998 78999999999999
Q ss_pred HHhCCCEEEeCceEEEEEecCCe-EEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCC
Q psy14927 958 LGKQGMQFKLGTKVTGASKSGDN-ITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRF 1036 (1074)
Q Consensus 958 l~~~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~ 1036 (1074)
+++.||++++++.|+++..++++ +.|++.+ | +++++|.||+|+|++|+++++.++.+|++++++|+|.||+++
T Consensus 241 l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~----G--~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~ 314 (490)
T 1fec_A 241 LRANGINVRTHENPAKVTKNADGTRHVVFES----G--AEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYS 314 (490)
T ss_dssp HHHTTEEEEETCCEEEEEECTTSCEEEEETT----S--CEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTC
T ss_pred HHhCCCEEEeCCEEEEEEEcCCCEEEEEECC----C--cEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCC
Confidence 99999999999999999876543 5666543 3 479999999999999999865568889999999999999999
Q ss_pred CCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1037 QTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1037 ~ts~~~IyAiGD~~~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
+|+.|+|||+|||++.+++++.|..+|+.+|.||++.
T Consensus 315 ~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 351 (490)
T 1fec_A 315 KTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFAN 351 (490)
T ss_dssp BCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred ccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCC
Confidence 9999999999999988889999999999999999973
No 18
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.97 E-value=2.7e-30 Score=306.04 Aligned_cols=264 Identities=24% Similarity=0.375 Sum_probs=211.9
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhcccccccc-------------------------------------chhh
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL-------------------------------------NLET 832 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~-------------------------------------~~~~ 832 (1074)
.+|+||||||+|+++|..+++ +++|+. ..|+.. ++..
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWET 83 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHHH
Confidence 459999999999999999998 788876 444432 1111
Q ss_pred hhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCCcceec
Q psy14927 833 MMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVS 912 (1074)
Q Consensus 833 ~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~~~v~t 912 (1074)
+..........+...+...+.+.||+++.|+++.+++..+.+ +| .++.||+||||||++|. +|.+++. ..+++
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~---~g--~~~~~d~lviAtGs~p~-~p~i~g~-~~~~~ 156 (450)
T 1ges_A 84 LIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV---NG--ETITADHILIATGGRPS-HPDIPGV-EYGID 156 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEE---TT--EEEEEEEEEECCCEEEC-CCCSTTG-GGSBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEE---CC--EEEEeCEEEECCCCCCC-CCCCCCc-cceec
Confidence 222222223334444556677889999999988888875544 56 57999999999999874 3334433 35677
Q ss_pred hhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEE
Q psy14927 913 STGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGAS 975 (1074)
Q Consensus 913 ~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~ 975 (1074)
+++++.+.. |..|.++|.+||++++.+.++ +.+++++.+.+.+.+++.||++++++.|.+++
T Consensus 157 ~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~ 235 (450)
T 1ges_A 157 SDGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL-PSFDPMISETLVEVMNAEGPQLHTNAIPKAVV 235 (450)
T ss_dssp HHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-TTSCHHHHHHHHHHHHHHSCEEECSCCEEEEE
T ss_pred HHHhhhhhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh-hhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 888776543 888889999999999999988 78999999999999999999999999999998
Q ss_pred ecCCe-EEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCCC
Q psy14927 976 KSGDN-ITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPM 1054 (1074)
Q Consensus 976 ~~~~~-~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~~ 1054 (1074)
.++++ +.+++.+ ++++++|.||+|+|++|+++++.++.+|++++++|+|.||++++|+.|||||+|||++.+.
T Consensus 236 ~~~~~~~~v~~~~------g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~ 309 (450)
T 1ges_A 236 KNTDGSLTLELED------GRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVE 309 (450)
T ss_dssp ECTTSCEEEEETT------SCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECSGGGTSCC
T ss_pred EeCCcEEEEEECC------CcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCEEEEeccCCCCc
Confidence 76544 5666544 3479999999999999999865567889999999999999999999999999999998888
Q ss_pred cHHHHHHHHHHHHHHhhCC
Q psy14927 1055 LAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1055 ~~~~A~~~G~~aA~~I~~~ 1073 (1074)
+++.|..+|+.+|.||++.
T Consensus 310 ~~~~A~~~g~~aa~~i~~~ 328 (450)
T 1ges_A 310 LTPVAVAAGRRLSERLFNN 328 (450)
T ss_dssp CHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999874
No 19
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.97 E-value=5.8e-30 Score=305.94 Aligned_cols=273 Identities=19% Similarity=0.250 Sum_probs=219.9
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccc------------------------------------cchhh
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVK------------------------------------LNLET 832 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~------------------------------------~~~~~ 832 (1074)
+.+|+||||||+|+.+|+.|++ +++|+. ..||. +++..
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 98 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRV 98 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHHH
Confidence 4569999999999999999998 678865 34432 12223
Q ss_pred hhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCC--CCCCCCcce
Q psy14927 833 MMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFP--GIEVDEETI 910 (1074)
Q Consensus 833 ~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ip--gi~~~~~~v 910 (1074)
+..+.......+...+...+...||+++.+++..+++..+.|. .+| .++.||+||||||++|..++ .+++.. .+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~-~~g--~~~~~d~lviAtG~~p~~p~~~~i~G~~-~~ 174 (478)
T 3dk9_A 99 IKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIE-VSG--KKYTAPHILIATGGMPSTPHESQIPGAS-LG 174 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEE-ETT--EEEECSCEEECCCEEECCCCTTTSTTGG-GS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEE-ECC--EEEEeeEEEEccCCCCCCCCcCCCCCCc-ee
Confidence 3333333444555556677788899999999999988776666 345 57999999999999874221 333322 56
Q ss_pred echhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEE
Q psy14927 911 VSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTG 973 (1074)
Q Consensus 911 ~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~ 973 (1074)
+++++++.+.. |..+.++|.+||++++.++++ +.+++++.+.+.+.|++.||++++++.|++
T Consensus 175 ~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~ 253 (478)
T 3dk9_A 175 ITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL-RSFDSMISTNCTEELENAGVEVLKFSQVKE 253 (478)
T ss_dssp BCHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-TTSCHHHHHHHHHHHHHTTCEEETTEEEEE
T ss_pred EchHHhhchhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc-cccCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 77888777653 888899999999999999998 899999999999999999999999999999
Q ss_pred EEecCCe--EEEEEeeccCCCC--ceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEeccc
Q psy14927 974 ASKSGDN--ITVTIENVKDPTK--KEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDC 1049 (1074)
Q Consensus 974 i~~~~~~--~~v~~~~~~~~g~--~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~ 1049 (1074)
++.++++ +.+.+.+.. +|+ +.++++|.||+|+|++|+++.+.++.+|++++++|+|.||++++|++|||||+|||
T Consensus 254 i~~~~~~~~~~v~~~~~~-~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~ 332 (478)
T 3dk9_A 254 VKKTLSGLEVSMVTAVPG-RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDV 332 (478)
T ss_dssp EEECSSSEEEEEEECCTT-SCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBCSSTTEEECGGG
T ss_pred EEEcCCCcEEEEEEccCC-CCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcccCCCCEEEEEec
Confidence 9876555 455555411 122 27899999999999999999776788999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1050 IHGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1050 ~~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
++.|.+++.|..+|+.+|.||++.
T Consensus 333 ~~~~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 333 CGKALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp GCSSCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCccHhHHHHHHHHHHHHHcCC
Confidence 988999999999999999999975
No 20
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.97 E-value=6.7e-30 Score=305.69 Aligned_cols=274 Identities=21% Similarity=0.300 Sum_probs=219.6
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhc---c------ccccc--------------------------------
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQA---G------DKGVK-------------------------------- 827 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~---~------~~g~~-------------------------------- 827 (1074)
+.+|+||||||+|+.||+.|++ +++|+. + ..||.
T Consensus 9 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 88 (483)
T 3dgh_A 9 DYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWNV 88 (483)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCccc
Confidence 4569999999999999999998 788731 1 12322
Q ss_pred -----cchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCC
Q psy14927 828 -----LNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPG 902 (1074)
Q Consensus 828 -----~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipg 902 (1074)
+++..+..+.....+.+...+...+...+|+++.+++.++++..+.|.+.+|. .++.||+||||||++|. +|.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~-~~~~~d~lviATGs~p~-~p~ 166 (483)
T 3dgh_A 89 DDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGE-RTITAQTFVIAVGGRPR-YPD 166 (483)
T ss_dssp CCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCC-EEEEEEEEEECCCEEEC-CCS
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCe-EEEEcCEEEEeCCCCcC-CCC
Confidence 12333333333333444444556677889999999999999999999887774 57999999999999874 334
Q ss_pred CCCCCcceechhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEE
Q psy14927 903 IEVDEETIVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQF 965 (1074)
Q Consensus 903 i~~~~~~v~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i 965 (1074)
+++....++++++++.+.. |..+.++|.+||++++. .++ +.+++++.+.+.+.|++.||++
T Consensus 167 i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l-~~~d~~~~~~l~~~l~~~Gv~i 244 (483)
T 3dgh_A 167 IPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVL-RGFDQQMAELVAASMEERGIPF 244 (483)
T ss_dssp STTHHHHCBCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-CSS-TTSCHHHHHHHHHHHHHTTCCE
T ss_pred CCCcccccCcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC-CCC-cccCHHHHHHHHHHHHhCCCEE
Confidence 4444455678888876553 88889999999999984 566 7899999999999999999999
Q ss_pred EeCceEEEEEecCC-eEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEE
Q psy14927 966 KLGTKVTGASKSGD-NITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIF 1044 (1074)
Q Consensus 966 ~~~~~v~~i~~~~~-~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~Iy 1044 (1074)
++++.+.++...++ .+.|++.+.. +++..++++|.||+|+|++|++++++++..|+++++ |+|.||++++|++||||
T Consensus 245 ~~~~~v~~i~~~~~~~~~v~~~~~~-~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t~~~~Iy 322 (483)
T 3dgh_A 245 LRKTVPLSVEKQDDGKLLVKYKNVE-TGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEATNVANIY 322 (483)
T ss_dssp EETEEEEEEEECTTSCEEEEEEETT-TCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTCBCSSTTEE
T ss_pred EeCCEEEEEEEcCCCcEEEEEecCC-CCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECcCCccCCCCEE
Confidence 99999999987544 3667777632 244568999999999999999998777899999998 99999999999999999
Q ss_pred EecccC-CCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1045 AIGDCI-HGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1045 AiGD~~-~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
|+|||+ +.|.+++.|..+|+.+|.||+|.
T Consensus 323 A~GD~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 323 AVGDIIYGKPELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp ECSTTBTTSCCCHHHHHHHHHHHHHHHHSC
T ss_pred EEEcccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 999998 55889999999999999999974
No 21
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.97 E-value=4.7e-30 Score=305.53 Aligned_cols=268 Identities=24% Similarity=0.348 Sum_probs=218.6
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhcccccccc-------------------------------chhhhhhhhh
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL-------------------------------NLETMMGTKS 838 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~-------------------------------~~~~~~~~~~ 838 (1074)
.+|+||||||+|+++|..|++ +++|+.+..||.. ++..+..+..
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKD 84 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHH
Confidence 459999999999999999998 7899777777653 2223333333
Q ss_pred HHHhhhh--hhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCCcceechhhH
Q psy14927 839 AAVKALT--GGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVSSTGA 916 (1074)
Q Consensus 839 ~~~~~l~--~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~~~v~t~~~~ 916 (1074)
...+ +. ..+...+.+.||+++.++++.++++.+.|.+.+|...++.||+||||||++|.. |.+++.. .+++++++
T Consensus 85 ~~~~-l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~-p~i~G~~-~~~t~~~~ 161 (466)
T 3l8k_A 85 YVQE-LRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAK-LRLPGVE-YCLTSDDI 161 (466)
T ss_dssp HHHH-HHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECC-CCCTTGG-GSBCHHHH
T ss_pred hhee-ccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccC-CCCCCcc-ceEeHHHH
Confidence 3333 33 556667778899999999999999999998888833339999999999998742 2233322 57888888
Q ss_pred h----cchH-----------------hhHHhhcCCcEEEEecCCccCCCCC-CHHHHHHHHHHHHhCCCEEEeCceEEEE
Q psy14927 917 L----SLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGI-DGEVAKQFQRILGKQGMQFKLGTKVTGA 974 (1074)
Q Consensus 917 ~----~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~-~~~~~~~~~~~l~~~gV~i~~~~~v~~i 974 (1074)
+ .+.. |..+.++|.+||++++.++++ +.+ ++++.+.+.+.++ |++++++.|+++
T Consensus 162 ~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i 237 (466)
T 3l8k_A 162 FGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL-ITLEDQDIVNTLLSILK---LNIKFNSPVTEV 237 (466)
T ss_dssp HSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-TTSCCHHHHHHHHHHHC---CCEECSCCEEEE
T ss_pred HHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC-CCCCCHHHHHHHHhcCE---EEEEECCEEEEE
Confidence 7 3332 888899999999999999998 666 9999999988877 999999999999
Q ss_pred EecC-CeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCC
Q psy14927 975 SKSG-DNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGP 1053 (1074)
Q Consensus 975 ~~~~-~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~ 1053 (1074)
..++ +++.+.+.+. +|+..++++|.||+|+|++|+++ +.++..|++++++| |.||++++|++|||||+|||++.|
T Consensus 238 ~~~~~~~v~v~~~~~--~G~~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~~~~G-i~vd~~~~t~~~~Iya~GD~~~~~ 313 (466)
T 3l8k_A 238 KKIKDDEYEVIYSTK--DGSKKSIFTNSVVLAAGRRPVIP-EGAREIGLSISKTG-IVVDETMKTNIPNVFATGDANGLA 313 (466)
T ss_dssp EEEETTEEEEEECCT--TSCCEEEEESCEEECCCEEECCC-TTTGGGTCCBCSSS-BCCCTTCBCSSTTEEECGGGTCSC
T ss_pred EEcCCCcEEEEEEec--CCceEEEEcCEEEECcCCCcccc-cchhhcCceeCCCC-EeECCCccCCCCCEEEEEecCCCC
Confidence 9876 6677776631 24456899999999999999999 55788999999999 999999999999999999999988
Q ss_pred CcHHHHHHHHHHHHHHhhCC
Q psy14927 1054 MLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1054 ~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
+++..|..+|+.||.||++.
T Consensus 314 ~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 314 PYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp CSHHHHHHHHHHHHHHHHTT
T ss_pred ccHhHHHHHHHHHHHHHhCC
Confidence 89999999999999999974
No 22
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.97 E-value=5.4e-30 Score=304.46 Aligned_cols=265 Identities=21% Similarity=0.344 Sum_probs=212.0
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhcccccccc------------------------------------chhhh
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL------------------------------------NLETM 833 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~------------------------------------~~~~~ 833 (1074)
.+|+||||||+|+++|..|++ +++|+. ..|+.. ++..+
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~ 83 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWPRL 83 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHHHH
Confidence 459999999999999999998 788876 444432 11111
Q ss_pred hhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCCcceech
Q psy14927 834 MGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVSS 913 (1074)
Q Consensus 834 ~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~~~v~t~ 913 (1074)
..........+...+...+.+.||+++.|+++.+++..+.+ +| .++.||+||||||++|.. |.+++. ..++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~---~g--~~~~~d~lviAtGs~p~~-p~i~G~-~~~~~~ 156 (463)
T 2r9z_A 84 VAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEV---EG--QRLSADHIVIATGGRPIV-PRLPGA-ELGITS 156 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEE---TT--EEEEEEEEEECCCEEECC-CSCTTG-GGSBCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEE---CC--EEEEcCEEEECCCCCCCC-CCCCCc-cceecH
Confidence 22222222334444556677889999999988888765544 56 579999999999998742 334433 346777
Q ss_pred hhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEe
Q psy14927 914 TGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASK 976 (1074)
Q Consensus 914 ~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~ 976 (1074)
++++.+.. |..|.++|.+||++++.+.++ +.+++++...+.+.+++.||++++++.|.+++.
T Consensus 157 ~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l-~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~ 235 (463)
T 2r9z_A 157 DGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL-FQFDPLLSATLAENMHAQGIETHLEFAVAALER 235 (463)
T ss_dssp HHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-TTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEE
T ss_pred HHHhhhhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc-cccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEE
Confidence 77766543 888889999999999999988 789999999999999999999999999999998
Q ss_pred cCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCCCcH
Q psy14927 977 SGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLA 1056 (1074)
Q Consensus 977 ~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~~~~ 1056 (1074)
+++++.|++.+ |+. ++++|.||+|+|++|+++++.++.+|++++++|+|.||++++|+.|||||+|||++.+.++
T Consensus 236 ~~~~~~v~~~~----G~~-~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~~~ 310 (463)
T 2r9z_A 236 DAQGTTLVAQD----GTR-LEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDITGRDQLT 310 (463)
T ss_dssp ETTEEEEEETT----CCE-EEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTEEECGGGGTSCCCH
T ss_pred eCCeEEEEEeC----CcE-EEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCEEEEeecCCCcccH
Confidence 66666666544 322 7999999999999999986556788999999999999999999999999999999888899
Q ss_pred HHHHHHHHHHHHHhhCC
Q psy14927 1057 HKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1057 ~~A~~~G~~aA~~I~~~ 1073 (1074)
..|..+|+.+|.||++.
T Consensus 311 ~~A~~~g~~aa~~i~g~ 327 (463)
T 2r9z_A 311 PVAIAAGRRLAERLFDG 327 (463)
T ss_dssp HHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 99999999999999874
No 23
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.97 E-value=4.7e-30 Score=304.75 Aligned_cols=268 Identities=39% Similarity=0.596 Sum_probs=216.4
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhccccccccc-----------------------------------hhhhhh
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLN-----------------------------------LETMMG 835 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~-----------------------------------~~~~~~ 835 (1074)
+|+||||||+|+++|..+++ +++|+.+..|+... +..+..
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 82 (455)
T 2yqu_A 3 DLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALMA 82 (455)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHHHH
T ss_pred CEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHHHH
Confidence 49999999999999999998 78888766665421 111111
Q ss_pred hhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCCcceechhh
Q psy14927 836 TKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVSSTG 915 (1074)
Q Consensus 836 ~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~~~v~t~~~ 915 (1074)
+.....+.+...+...+.+.||+++.|+++.+++..+.|.+ +| .++.||+||||||++|..+|..+.....++++++
T Consensus 83 ~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~-~g--~~~~~d~lviAtG~~p~~~~~~g~~~~~v~~~~~ 159 (455)
T 2yqu_A 83 HKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEE-TG--EELEARYILIATGSAPLIPPWAQVDYERVVTSTE 159 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETT-TC--CEEEEEEEEECCCEEECCCTTBCCCSSSEECHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEee-CC--EEEEecEEEECCCCCCCCCCCCCCCcCcEechHH
Confidence 22222223333445667778999999998888888777765 56 6899999999999987533322223336888888
Q ss_pred HhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecC
Q psy14927 916 ALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSG 978 (1074)
Q Consensus 916 ~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~ 978 (1074)
++.+.. |..|++.|.+||++++.+.++ +.+++++.+.+.+.+++.||+++++++|++++.++
T Consensus 160 ~~~~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l-~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~ 238 (455)
T 2yqu_A 160 ALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-PTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA 238 (455)
T ss_dssp HTCCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-TTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEET
T ss_pred hhccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc-cccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC
Confidence 876543 788889999999999999988 78999999999999999999999999999999876
Q ss_pred CeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCCCcHHH
Q psy14927 979 DNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLAHK 1058 (1074)
Q Consensus 979 ~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~~~~~~ 1058 (1074)
+++.+++.+ +.++++|.||+|+|.+|+++++.++..|++++++|+|.||++++|+.|+|||+|||+..+++++.
T Consensus 239 ~~v~v~~~~------g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~ 312 (455)
T 2yqu_A 239 KGARVELEG------GEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAIGDVVRGPMLAHK 312 (455)
T ss_dssp TEEEEEETT------SCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEECGGGSSSCCCHHH
T ss_pred CEEEEEECC------CeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEEEecCCCCccCHHH
Confidence 666665543 45799999999999999998766678899998889999999999999999999999999989999
Q ss_pred HHHHHHHHHHHhhCC
Q psy14927 1059 AEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1059 A~~~G~~aA~~I~~~ 1073 (1074)
|..+|+.+|.||++.
T Consensus 313 A~~~g~~aa~~i~~~ 327 (455)
T 2yqu_A 313 ASEEGIAAVEHMVRG 327 (455)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHhHHHHHHHHcCC
Confidence 999999999999863
No 24
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.97 E-value=1.1e-29 Score=302.26 Aligned_cols=266 Identities=22% Similarity=0.348 Sum_probs=216.6
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhcccccccc------------------------------------chhhh
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL------------------------------------NLETM 833 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~------------------------------------~~~~~ 833 (1074)
.+|+||||||+|+++|+.|++ +++|+ +..|+.. ++..+
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 84 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAKL 84 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHHH
Confidence 459999999999999999998 78887 4455421 22223
Q ss_pred hhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCCcceech
Q psy14927 834 MGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVSS 913 (1074)
Q Consensus 834 ~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~~~v~t~ 913 (1074)
..........+...+...+...||+++.+++..+++..+.+. .++ .++.||+||||||++|..+|.+++. ..++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~-~~~--~~~~~d~lviAtG~~p~~~p~i~G~-~~~~~~ 160 (463)
T 4dna_A 85 VAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLL-ASG--KTVTAERIVIAVGGHPSPHDALPGH-ELCITS 160 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEET-TTT--EEEEEEEEEECCCEEECCCTTSTTG-GGCBCH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEe-cCC--eEEEeCEEEEecCCCcccCCCCCCc-cccccH
Confidence 333333334555556677778899999999999987655442 455 6899999999999987524445442 256788
Q ss_pred hhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEe
Q psy14927 914 TGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASK 976 (1074)
Q Consensus 914 ~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~ 976 (1074)
++++.+.. |..+.+.|.+||++++.+.++ +.+++++.+.+.+.+++.||++++++.|.++..
T Consensus 161 ~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l-~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~ 239 (463)
T 4dna_A 161 NEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL-SRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSA 239 (463)
T ss_dssp HHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-TTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEE
T ss_pred HHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-cccCHHHHHHHHHHHHHCCCEEECCCEEEEEEE
Confidence 88777643 778889999999999999998 889999999999999999999999999999998
Q ss_pred cCCe-EEEE-EeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCCC
Q psy14927 977 SGDN-ITVT-IENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPM 1054 (1074)
Q Consensus 977 ~~~~-~~v~-~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~~ 1054 (1074)
++++ +.|. +.+ ++ +++|.||+|+|++|++.+++++..|++++++|+|.||++++|++|||||+|||++.++
T Consensus 240 ~~~~~~~v~~~~~------g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~ 312 (463)
T 4dna_A 240 DADGRRVATTMKH------GE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDVTDRVQ 312 (463)
T ss_dssp CTTSCEEEEESSS------CE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEECSGGGSSCC
T ss_pred cCCCEEEEEEcCC------Ce-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCCCCEEEEEecCCCCC
Confidence 6555 4555 433 34 9999999999999999987778899999999999999999999999999999999888
Q ss_pred cHHHHHHHHHHHHHHhhCC
Q psy14927 1055 LAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1055 ~~~~A~~~G~~aA~~I~~~ 1073 (1074)
+++.|..+|+.+|.||++.
T Consensus 313 ~~~~A~~~g~~aa~~i~g~ 331 (463)
T 4dna_A 313 LTPVAIHEAMCFIETEYKN 331 (463)
T ss_dssp CHHHHHHHHHHHHHHHHSS
T ss_pred ChHHHHHHHHHHHHHHcCC
Confidence 9999999999999999974
No 25
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.97 E-value=3.4e-29 Score=298.42 Aligned_cols=268 Identities=24% Similarity=0.367 Sum_probs=213.3
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccc-------------------------------------hh
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLN-------------------------------------LE 831 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~-------------------------------------~~ 831 (1074)
+.+||||||||+|+++|+.|++ +++|+. ..|+... +.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRS 82 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCHH
Confidence 3459999999999999999998 788876 4443311 11
Q ss_pred hhhhhhhHHHhhhhh-hHHHHhhhC-CeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCCC
Q psy14927 832 TMMGTKSAAVKALTG-GIAHLFKSN-KVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVDE 907 (1074)
Q Consensus 832 ~~~~~~~~~~~~l~~-~~~~~l~~~-gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~ 907 (1074)
.+..........+.. .+...+.+. ||+++.|+++.+++..+.|.+.+|...++.||+||||||++|. ++||++ .
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~G~~--~ 160 (467)
T 1zk7_A 83 KLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLK--E 160 (467)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCCCTTTT--T
T ss_pred HHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCCCCCC--c
Confidence 111111111111211 234556677 9999999999999998988888775567999999999999874 344442 2
Q ss_pred cceechhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCce
Q psy14927 908 ETIVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTK 970 (1074)
Q Consensus 908 ~~v~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~ 970 (1074)
..++++++++.+.. |..+.++|.+||++++.++++ + +++++.+.+.+.+++.||++++++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~-~~~~~~~~l~~~l~~~Gv~i~~~~~ 238 (467)
T 1zk7_A 161 SPYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-R-EDPAIGEAVTAAFRAEGIEVLEHTQ 238 (467)
T ss_dssp SCCBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-T-SCHHHHHHHHHHHHHTTCEEETTCC
T ss_pred CceecHHHHhcccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC-C-CCHHHHHHHHHHHHhCCCEEEcCCE
Confidence 34678888776542 778889999999999999998 6 9999999999999999999999999
Q ss_pred EEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccC
Q psy14927 971 VTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCI 1050 (1074)
Q Consensus 971 v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~ 1050 (1074)
|.++..+++.+.+.+. +.++++|.||+|+|++|+++++.++..|++++++|+|.||++++|+.|+|||+|||+
T Consensus 239 v~~i~~~~~~~~v~~~-------~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~ 311 (467)
T 1zk7_A 239 ASQVAHMDGEFVLTTT-------HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDCT 311 (467)
T ss_dssp EEEEEEETTEEEEEET-------TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECSTTB
T ss_pred EEEEEEeCCEEEEEEC-------CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccCCCCEEEEeccC
Confidence 9999886665555432 247999999999999999987656788999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1051 HGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1051 ~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
..|.+++.|..+|+.+|.||++.
T Consensus 312 ~~~~~~~~A~~~g~~aa~~i~~~ 334 (467)
T 1zk7_A 312 DQPQFVYVAAAAGTRAAINMTGG 334 (467)
T ss_dssp SSCCCHHHHHHHHHHHHHHHTTC
T ss_pred CCcccHHHHHHHHHHHHHHHcCC
Confidence 99889999999999999999864
No 26
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.97 E-value=4e-30 Score=303.02 Aligned_cols=264 Identities=19% Similarity=0.260 Sum_probs=201.6
Q ss_pred hhhhhccccchHHHHHHHhh-------hhhhhccccccc-cchhhhhhhhh-HHHhhhhhhHHHHhhhCCeEEEee-eEE
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVK-LNLETMMGTKS-AAVKALTGGIAHLFKSNKVTQLNG-HGK 865 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~-~~~~~~~~~~~-~~~~~l~~~~~~~l~~~gV~~~~g-~v~ 865 (1074)
+||||||||||++||.+|++ +++++.+..... ..++....... .....+......++.+.||+++.+ +|+
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 39999999999999999987 577776644321 11221111111 111122223455667789999988 688
Q ss_pred EecCCeEEEEe---CCCCeeEEEcCeEEEccCCCCCCCCCCCCCCccee-chhhHhcchH--------------------
Q psy14927 866 ITGPNTVTVIK---SDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIV-SSTGALSLKK-------------------- 921 (1074)
Q Consensus 866 ~id~~~~~v~~---~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~~~v~-t~~~~~~~~~-------------------- 921 (1074)
.+|.....+.+ .+++..++.||+||||||++|. .|++++...+.+ +.++...+..
T Consensus 82 ~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~-~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~ 160 (437)
T 4eqs_A 82 AINDERQTVSVLNRKTNEQFEESYDKLILSPGASAN-SLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSL 160 (437)
T ss_dssp EEETTTTEEEEEETTTTEEEEEECSEEEECCCEEEC-CCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHH
T ss_pred EEEccCcEEEEEeccCCceEEEEcCEEEECCCCccc-cccccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchh
Confidence 89876544443 2344467999999999999984 556765544322 3333332211
Q ss_pred --hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEc
Q psy14927 922 --GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSC 999 (1074)
Q Consensus 922 --A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~ 999 (1074)
|..+.++|.+||++++.++++ +.+++++.+.+.+.+++.||++++++.|+++++. .+.+++ ++++++
T Consensus 161 E~A~~l~~~g~~Vtlv~~~~~ll-~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~----~v~~~~------g~~~~~ 229 (437)
T 4eqs_A 161 EVLENLYERGLHPTLIHRSDKIN-KLMDADMNQPILDELDKREIPYRLNEEINAINGN----EITFKS------GKVEHY 229 (437)
T ss_dssp HHHHHHHHHTCEEEEEESSSCCS-TTSCGGGGHHHHHHHHHTTCCEEESCCEEEEETT----EEEETT------SCEEEC
T ss_pred hhHHHHHhcCCcceeeeeecccc-ccccchhHHHHHHHhhccceEEEeccEEEEecCC----eeeecC------CeEEee
Confidence 888899999999999999999 8899999999999999999999999999998763 255544 468999
Q ss_pred CEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCC----------CCcHHHHHHHHHHHHHH
Q psy14927 1000 DALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG----------PMLAHKAEDEGIVCVEG 1069 (1074)
Q Consensus 1000 D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~----------~~~~~~A~~~G~~aA~~ 1069 (1074)
|.||+++|++||+++ ++..|++++++|+|.||+++|||+|||||+|||++. +++++.|..||+++|.|
T Consensus 230 D~vl~a~G~~Pn~~~--~~~~gl~~~~~G~I~vd~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~n 307 (437)
T 4eqs_A 230 DMIIEGVGTHPNSKF--IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQ 307 (437)
T ss_dssp SEEEECCCEEESCGG--GTTSSCCCCTTSCEECCTTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHH
T ss_pred eeEEEEeceecCcHH--HHhhhhhhccCCcEecCCCccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHH
Confidence 999999999999987 678899999999999999999999999999999863 34789999999999999
Q ss_pred hhCC
Q psy14927 1070 IAGD 1073 (1074)
Q Consensus 1070 I~~~ 1073 (1074)
|+|.
T Consensus 308 i~g~ 311 (437)
T 4eqs_A 308 IAGN 311 (437)
T ss_dssp HHSC
T ss_pred HcCC
Confidence 9985
No 27
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.96 E-value=1.4e-29 Score=302.98 Aligned_cols=267 Identities=20% Similarity=0.308 Sum_probs=217.6
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhcccccccc------------------------------------chhhh
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL------------------------------------NLETM 833 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~------------------------------------~~~~~ 833 (1074)
.+|+||||||+|+++|+.|++ +++|+ +..|+.. ++..+
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~ 105 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEKL 105 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHHH
Confidence 469999999999999999998 78888 4444432 22223
Q ss_pred hhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCCcceech
Q psy14927 834 MGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVSS 913 (1074)
Q Consensus 834 ~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~~~v~t~ 913 (1074)
..........+...+...+...||+++.+++..+++..+.+. .++ .++.||+||||||+.|..+|.+++.. .++++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~-~~~--~~~~~d~lviAtG~~p~~~p~i~G~~-~~~~~ 181 (484)
T 3o0h_A 106 VAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELS-VTG--ERISAEKILIATGAKIVSNSAIKGSD-LCLTS 181 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET-TTC--CEEEEEEEEECCCEEECCC--CBTGG-GSBCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEe-cCC--eEEEeCEEEEccCCCcccCCCCCCcc-ccccH
Confidence 333333444555567777888999999999999998765542 255 68999999999999875244454432 46677
Q ss_pred hhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEe
Q psy14927 914 TGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASK 976 (1074)
Q Consensus 914 ~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~ 976 (1074)
++++.+.. |..+.+.|.+|+++++.+.++ +.+++++...+.+.+++.||++++++.|.+++.
T Consensus 182 ~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~ 260 (484)
T 3o0h_A 182 NEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL-RNFDYDLRQLLNDAMVAKGISIIYEATVSQVQS 260 (484)
T ss_dssp TTGGGCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-TTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEE
T ss_pred HHHHhHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc-cccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEe
Confidence 77666532 778889999999999999998 789999999999999999999999999999998
Q ss_pred cCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCCCcH
Q psy14927 977 SGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLA 1056 (1074)
Q Consensus 977 ~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~~~~ 1056 (1074)
+++++.|.+.+ ++++++|.||+|+|++|++.++.+...|++++++|+|.||++++|++|||||+|||++.++++
T Consensus 261 ~~~~v~v~~~~------g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~~~ 334 (484)
T 3o0h_A 261 TENCYNVVLTN------GQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDVTGHIQLT 334 (484)
T ss_dssp CSSSEEEEETT------SCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGGTSCCCH
T ss_pred eCCEEEEEECC------CcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEEEEEecCCCCcCH
Confidence 76667676654 358999999999999999998777889999999999999999999999999999999988899
Q ss_pred HHHHHHHHHHHHHhhCC
Q psy14927 1057 HKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1057 ~~A~~~G~~aA~~I~~~ 1073 (1074)
+.|..+|+.+|.||++.
T Consensus 335 ~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 335 PVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp HHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 99999999999999974
No 28
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.96 E-value=3.4e-29 Score=297.28 Aligned_cols=265 Identities=29% Similarity=0.439 Sum_probs=211.6
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhcccccccc---------------------------------------c
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL---------------------------------------N 829 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~---------------------------------------~ 829 (1074)
+.+|+||||||||++||..+++ +++|+ +..||.. +
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLD 83 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCccC
Confidence 3459999999999999999998 78887 4554432 1
Q ss_pred hhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCCcc
Q psy14927 830 LETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEET 909 (1074)
Q Consensus 830 ~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~~~ 909 (1074)
+..+..+.....+.+...+...+++.||+++.|+++.+++..+.+ .+ .++.||+||||||++|..+|+++.+. .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v--~~---~~~~~d~lviATGs~p~~~~~~~~~~-~ 157 (458)
T 1lvl_A 84 IGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEV--DG---QRIQCEHLLLATGSSSVELPMLPLGG-P 157 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEE--TT---EEEECSEEEECCCEEECCBTTBCCBT-T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEE--ee---EEEEeCEEEEeCCCCCCCCCCCCccC-c
Confidence 122222222222333334556778899999999888887765443 33 57999999999999986555555332 6
Q ss_pred eechhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEE
Q psy14927 910 IVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVT 972 (1074)
Q Consensus 910 v~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~ 972 (1074)
++++.+++.+.. |..|++.|.+||++++.++++ +.+++++.+.+.+.+++.||++++++.|+
T Consensus 158 v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~~~~~~~~~~l~~~l~~~gv~i~~~~~v~ 236 (458)
T 1lvl_A 158 VISSTEALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL-PTYDSELTAPVAESLKKLGIALHLGHSVE 236 (458)
T ss_dssp EECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-TTSCHHHHHHHHHHHHHHTCEEETTCEEE
T ss_pred EecHHHHhhhhccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc-cccCHHHHHHHHHHHHHCCCEEEECCEEE
Confidence 888888887643 888889999999999999998 78999999999999999999999999999
Q ss_pred EEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCC
Q psy14927 973 GASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG 1052 (1074)
Q Consensus 973 ~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~ 1052 (1074)
+++. + .+.++ . . +|+..++++|.||+|+|++|+++++.++..|++++++ +|.||++++|+.|+|||+|||+..
T Consensus 237 ~i~~-~-~v~v~--~-~-~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~~t~~~~Iya~GD~~~~ 309 (458)
T 1lvl_A 237 GYEN-G-CLLAN--D-G-KGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERCQTSMHNVWAIGDVAGE 309 (458)
T ss_dssp EEET-T-EEEEE--C-S-SSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTCBCSSTTEEECGGGGCS
T ss_pred EEEe-C-CEEEE--E-C-CCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCCcCCCCCEEEeeccCCC
Confidence 9987 3 34443 2 1 2444789999999999999999976568889998887 999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHhhCC
Q psy14927 1053 PMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1053 ~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
|++++.|..+|+.+|.||+|.
T Consensus 310 ~~~~~~A~~~g~~aa~~i~g~ 330 (458)
T 1lvl_A 310 PMLAHRAMAQGEMVAEIIAGK 330 (458)
T ss_dssp SCCHHHHHHHHHHHHHHHTTC
T ss_pred cccHHHHHHHHHHHHHHhcCC
Confidence 889999999999999999874
No 29
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.96 E-value=2.8e-29 Score=301.27 Aligned_cols=268 Identities=22% Similarity=0.312 Sum_probs=200.3
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhcccccccc-----------------------------------chhhhhh
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL-----------------------------------NLETMMG 835 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~-----------------------------------~~~~~~~ 835 (1074)
+||||||||+|+++|..+++ +++|+.. .|+.. ++..+..
T Consensus 4 dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~ 82 (500)
T 1onf_A 4 DLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLLVE 82 (500)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHHHH
Confidence 49999999999999999998 7888764 44331 1111111
Q ss_pred hhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeC---------CCCeeEEEcCeEEEccCCCCCCCCCCCCC
Q psy14927 836 TKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKS---------DGSTEEVKTKNILIATGSEVTPFPGIEVD 906 (1074)
Q Consensus 836 ~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~---------~G~~~~i~~d~lIIATG~~p~~ipgi~~~ 906 (1074)
........+...+...+.+.||+++.++++.+++..+.+... ++...++.||+||||||++|. +|.+++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~-~p~i~G~ 161 (500)
T 1onf_A 83 RRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPV-FPPVKGI 161 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCCCBC-CCSCTTG
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCCCCC-CCCCCCC
Confidence 122222344444566677889999999887777655444320 011257999999999999984 3334433
Q ss_pred CcceechhhHhcchH----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCce
Q psy14927 907 EETIVSSTGALSLKK----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTK 970 (1074)
Q Consensus 907 ~~~v~t~~~~~~~~~----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~ 970 (1074)
..++++++++.+.. |..|.++|.+||++++.++++ +.+++++...+.+.|++.||++++++.
T Consensus 162 -~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-~~~d~~~~~~l~~~l~~~gv~i~~~~~ 239 (500)
T 1onf_A 162 -ENTISSDEFFNIKESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL-RKFDESVINVLENDMKKNNINIVTFAD 239 (500)
T ss_dssp -GGCEEHHHHTTCCCCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC-TTSCHHHHHHHHHHHHHTTCEEECSCC
T ss_pred -CcccCHHHHhccCCCCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC-cccchhhHHHHHHHHHhCCCEEEECCE
Confidence 35678888776541 888889999999999999999 789999999999999999999999999
Q ss_pred EEEEEecCCe-EEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEeccc
Q psy14927 971 VTGASKSGDN-ITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDC 1049 (1074)
Q Consensus 971 v~~i~~~~~~-~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~ 1049 (1074)
|+++.+++++ +.+++.+ |+. ++++|.||+|+|++|+++.+.++.+|+++ ++|+|.||++++|+.|+|||+|||
T Consensus 240 v~~i~~~~~~~~~v~~~~----g~~-~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd~~~~t~~~~iya~GD~ 313 (500)
T 1onf_A 240 VVEIKKVSDKNLSIHLSD----GRI-YEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVDENQRTSVNNIYAVGDC 313 (500)
T ss_dssp EEEEEESSTTCEEEEETT----SCE-EEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEEECTTCBCSSSSEEECSTT
T ss_pred EEEEEEcCCceEEEEECC----CcE-EEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEEECCCcccCCCCEEEEecc
Confidence 9999875433 5666543 321 39999999999999999765567889998 789999999999999999999999
Q ss_pred C----------------------------------CCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1050 I----------------------------------HGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1050 ~----------------------------------~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
+ ..+++++.|..||+.+|.||++.
T Consensus 314 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~ 371 (500)
T 1onf_A 314 CMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLK 371 (500)
T ss_dssp EEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSC
T ss_pred ccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCC
Confidence 9 45678999999999999999873
No 30
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.96 E-value=4.3e-29 Score=298.93 Aligned_cols=269 Identities=22% Similarity=0.261 Sum_probs=214.1
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhcccccccc------------------------------------chhhh
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL------------------------------------NLETM 833 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~------------------------------------~~~~~ 833 (1074)
.+|+||||||||++||..+++ +++|+.. .||.. ++..+
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~ 87 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNGKAV 87 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCHHHH
Confidence 469999999999999999998 7888754 44421 11111
Q ss_pred hhhhhHHHhhhhhhHHHHhhhC-CeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCCcceec
Q psy14927 834 MGTKSAAVKALTGGIAHLFKSN-KVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIVS 912 (1074)
Q Consensus 834 ~~~~~~~~~~l~~~~~~~l~~~-gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~~~v~t 912 (1074)
..+.....+.+...+...+... +++++.|++.++++..+. +.++ .++.||+||||||++|..+|..+.....+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~--~~~~--~~~~~d~lViATGs~p~~p~~~~~~~~~v~t 163 (492)
T 3ic9_A 88 MKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQ--VDDH--SQVIAKRIVIATGSRPNYPEFLAAAGSRLLT 163 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEE--ETTT--EEEEEEEEEECCCEECCCCHHHHTTGGGEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEE--EcCC--cEEEeCEEEEccCCCCcCCCCCCccCCcEEc
Confidence 1222222222222222333333 678899998888877554 4566 6899999999999998533323334567889
Q ss_pred hhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEE
Q psy14927 913 STGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGAS 975 (1074)
Q Consensus 913 ~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~ 975 (1074)
+++++.+.. |..|.++|.+||++++.++++ +.+++++.+.+.+.|++. |++++++.+++++
T Consensus 164 ~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~ 241 (492)
T 3ic9_A 164 NDNLFELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA-NLQDEEMKRYAEKTFNEE-FYFDAKARVISTI 241 (492)
T ss_dssp HHHHTTCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT-TCCCHHHHHHHHHHHHTT-SEEETTCEEEEEE
T ss_pred HHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-ccCCHHHHHHHHHHHhhC-cEEEECCEEEEEE
Confidence 999887653 888999999999999999998 789999999999999988 9999999999999
Q ss_pred ecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeC-CCCCCCCCCEEEecccCCCCC
Q psy14927 976 KSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVN-SRFQTVIPNIFAIGDCIHGPM 1054 (1074)
Q Consensus 976 ~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd-~~~~ts~~~IyAiGD~~~~~~ 1054 (1074)
.+++++.+++.+. +|+..++++|.||+|+|++|++++++++..|++++++|+|.|| ++++|+.|||||+|||++.++
T Consensus 242 ~~~~~v~v~~~~~--~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~ 319 (492)
T 3ic9_A 242 EKEDAVEVIYFDK--SGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLT 319 (492)
T ss_dssp ECSSSEEEEEECT--TCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSC
T ss_pred EcCCEEEEEEEeC--CCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCCc
Confidence 8777777777631 2444789999999999999999998788999999999999999 999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHhhC
Q psy14927 1055 LAHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 1055 ~~~~A~~~G~~aA~~I~~ 1072 (1074)
+++.|..+|+.||.||++
T Consensus 320 ~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 320 LLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp SHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcC
Confidence 999999999999999986
No 31
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.96 E-value=1.8e-29 Score=301.76 Aligned_cols=277 Identities=18% Similarity=0.194 Sum_probs=199.9
Q ss_pred CCCCCccchhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHh--hhCCeEE
Q psy14927 787 PPESDDQRQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLF--KSNKVTQ 859 (1074)
Q Consensus 787 ~~~~~~~k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l--~~~gV~~ 859 (1074)
.|...+ |++|||||||+||+.+|..|++ +|+++.+.+..++.++.+..+.-.. ..+...+...+ ...+|+|
T Consensus 36 ~p~~~~-KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~-~~i~~p~~~~~~~~~~~v~~ 113 (502)
T 4g6h_A 36 DPQHSD-KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDE-KSIIEPIVNFALKKKGNVTY 113 (502)
T ss_dssp CCCSCS-SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCG-GGGEEEHHHHHTTCSSCEEE
T ss_pred CCCCCC-CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccH-HHhhhhHHHHHHhhcCCeEE
Confidence 344444 6779999999999999999987 7888877655454444443332111 33333344433 3458999
Q ss_pred EeeeEEEecCCeEEEEeCC------------------CCeeEEEcCeEEEccCCCCCCCCCCCCCCccee---chhhHhc
Q psy14927 860 LNGHGKITGPNTVTVIKSD------------------GSTEEVKTKNILIATGSEVTPFPGIEVDEETIV---SSTGALS 918 (1074)
Q Consensus 860 ~~g~v~~id~~~~~v~~~~------------------G~~~~i~~d~lIIATG~~p~~ipgi~~~~~~v~---t~~~~~~ 918 (1074)
+.++|+.||++..+|++.+ ++..++.||+||||||+.|. .|++|+..++.+ +..+...
T Consensus 114 ~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~-~~~ipG~~e~a~~l~t~~dA~~ 192 (502)
T 4g6h_A 114 YEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPN-TFGIPGVTDYGHFLKEIPNSLE 192 (502)
T ss_dssp EEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEEC-CTTCTTHHHHCEECSSHHHHHH
T ss_pred EEEEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccc-cCCccCcccccCCCCCHHHHHH
Confidence 9999999998766665421 22368999999999999874 223433222222 3333322
Q ss_pred chH-------------------------------------hhHHhhc--------------CCcEEEEecCCccCCCCCC
Q psy14927 919 LKK-------------------------------------GSVWGRL--------------GAEVTAIEFMNAIGGMGID 947 (1074)
Q Consensus 919 ~~~-------------------------------------A~~l~~~--------------G~~Vtlv~~~~~~~~~~~~ 947 (1074)
+.. |..+.++ ..+|||+++.++++ +.++
T Consensus 193 ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il-~~~~ 271 (502)
T 4g6h_A 193 IRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL-NMFE 271 (502)
T ss_dssp HHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS-TTSC
T ss_pred HHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc-cCCC
Confidence 211 3333322 26899999999999 8899
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCC--ceEEEcCEEEEccCCcccCCccC-ccccCccc
Q psy14927 948 GEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTK--KEELSCDALLVCVGRRPYTHNLG-LEEIGIEK 1024 (1074)
Q Consensus 948 ~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~--~~~i~~D~vi~a~G~~p~~~~l~-l~~~gl~l 1024 (1074)
+++++.+.+.|++.||++++++.|+++++ +++.+..... +|+ ++++++|+||||+|.+|++..-. ....++..
T Consensus 272 ~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~--dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~ 347 (502)
T 4g6h_A 272 KKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHE--DGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQN 347 (502)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECT--TSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEec--CcccceeeeccCEEEEccCCcCCHHHHhHHHhccccc
Confidence 99999999999999999999999999976 4444443321 232 35799999999999999842111 34556777
Q ss_pred CCCCCeeeCCCCCC-CCCCEEEecccCCC--CCcHHHHHHHHHHHHHHhh
Q psy14927 1025 DEKGRVPVNSRFQT-VIPNIFAIGDCIHG--PMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1025 d~~G~I~Vd~~~~t-s~~~IyAiGD~~~~--~~~~~~A~~~G~~aA~~I~ 1071 (1074)
+.+|+|.||+++|| ++|||||+|||+.. |++++.|.+||..+|+||.
T Consensus 348 ~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~ 397 (502)
T 4g6h_A 348 SSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFD 397 (502)
T ss_dssp TCCSSEEBCTTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCceeECCccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHH
Confidence 88899999999998 89999999999864 6789999999999999985
No 32
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.96 E-value=9.5e-29 Score=298.19 Aligned_cols=265 Identities=20% Similarity=0.298 Sum_probs=208.6
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhh-hhh---------------------------h---h
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLET-MMG---------------------------T---K 837 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~-~~~---------------------------~---~ 837 (1074)
+.+||||||||+|+++|.+|++ +++|+.+..|+...... ++. . .
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 122 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVGI 122 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhhH
Confidence 4569999999999999999998 78998876666432211 110 0 1
Q ss_pred hHHHhhhhhhHH---HHh-----hhCCeEEE-eeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCC-C
Q psy14927 838 SAAVKALTGGIA---HLF-----KSNKVTQL-NGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVD-E 907 (1074)
Q Consensus 838 ~~~~~~l~~~~~---~~l-----~~~gV~~~-~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~-~ 907 (1074)
......+...+. ..+ ...||+++ .++++.+++..+.+ . | .++.||+||||||++|.. |.+++. .
T Consensus 123 ~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~--~-g--~~~~~d~lViATGs~p~~-p~i~G~~~ 196 (523)
T 1mo9_A 123 KEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEA--A-G--KVFKAKNLILAVGAGPGT-LDVPGVNA 196 (523)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEE--T-T--EEEEBSCEEECCCEECCC-CCSTTTTS
T ss_pred HHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEE--C-C--EEEEeCEEEECCCCCCCC-CCCCCccc
Confidence 112222222223 555 77899999 78899998865544 3 5 579999999999998742 223332 2
Q ss_pred cceechhhHh-cch----H--------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeC
Q psy14927 908 ETIVSSTGAL-SLK----K--------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLG 968 (1074)
Q Consensus 908 ~~v~t~~~~~-~~~----~--------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~ 968 (1074)
..++++.+++ .+. + |..+.+.|.+||++++.+.++ +.+++++...+.+.+++.||+++++
T Consensus 197 ~~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-~~~~~~~~~~l~~~l~~~GV~i~~~ 275 (523)
T 1mo9_A 197 KGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK-LIKDNETRAYVLDRMKEQGMEIISG 275 (523)
T ss_dssp BTEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-TCCSHHHHHHHHHHHHHTTCEEESS
T ss_pred CcEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc-ccccHHHHHHHHHHHHhCCcEEEEC
Confidence 3478888777 332 1 778889999999999999998 7899999999999999999999999
Q ss_pred ceEEEEEecCCe----EEEEEeeccCCCCce-EEEcCEEEEccCCcccCC-ccCccccCcccCCCCCeeeCCCCCCCCCC
Q psy14927 969 TKVTGASKSGDN----ITVTIENVKDPTKKE-ELSCDALLVCVGRRPYTH-NLGLEEIGIEKDEKGRVPVNSRFQTVIPN 1042 (1074)
Q Consensus 969 ~~v~~i~~~~~~----~~v~~~~~~~~g~~~-~i~~D~vi~a~G~~p~~~-~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~ 1042 (1074)
+.|+++..++++ +.|++.+ ++ ++++|.||+|+|++|+++ + ++.+|++++++|+|.||++++|+.|+
T Consensus 276 ~~V~~i~~~~~~~v~~~~v~~~~------G~~~i~aD~Vv~A~G~~p~~~~~--l~~~gl~~~~~G~i~Vd~~~~t~~~~ 347 (523)
T 1mo9_A 276 SNVTRIEEDANGRVQAVVAMTPN------GEMRIETDFVFLGLGEQPRSAEL--AKILGLDLGPKGEVLVNEYLQTSVPN 347 (523)
T ss_dssp CEEEEEEECTTSBEEEEEEEETT------EEEEEECSCEEECCCCEECCHHH--HHHHTCCBCTTSCBCCCTTSBCSSTT
T ss_pred CEEEEEEEcCCCceEEEEEEECC------CcEEEEcCEEEECcCCccCCccC--HHHcCCccCCCCCEEECCCCccCCCC
Confidence 999999875444 4455433 34 899999999999999998 5 67889999999999999999999999
Q ss_pred EEEecccCCCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1043 IFAIGDCIHGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1043 IyAiGD~~~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
|||+|||++.|++++.|..||+.||.||+|.
T Consensus 348 IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 378 (523)
T 1mo9_A 348 VYAVGDLIGGPMEMFKARKSGCYAARNVMGE 378 (523)
T ss_dssp EEECGGGGCSSCSHHHHHHHHHHHHHHHTTC
T ss_pred EEEEeecCCCcccHHHHHHHHHHHHHHHcCC
Confidence 9999999998889999999999999999974
No 33
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.96 E-value=2.9e-28 Score=299.26 Aligned_cols=275 Identities=22% Similarity=0.306 Sum_probs=207.4
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhc-c-------cccccc-chh----------------------------
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQA-G-------DKGVKL-NLE---------------------------- 831 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~-~-------~~g~~~-~~~---------------------------- 831 (1074)
+.+|+||||||||++||..+++ +++|+. + ..||.. ...
T Consensus 107 ~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~~ 186 (598)
T 2x8g_A 107 DYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSLD 186 (598)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcccc
Confidence 4459999999999999999998 678852 2 133321 100
Q ss_pred ---------hhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCC
Q psy14927 832 ---------TMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPG 902 (1074)
Q Consensus 832 ---------~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipg 902 (1074)
.+..+.......+...+...+...+|+++.+.++++++..+.+...+|+..++.||+||||||++|. .|.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~-~p~ 265 (598)
T 2x8g_A 187 RSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPK-YPE 265 (598)
T ss_dssp GGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEEC-CCS
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCC-CCC
Confidence 0001111111112222334466789999999999999998888777775457999999999999874 334
Q ss_pred CCCCCcceechhhHhcchH-----------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEE
Q psy14927 903 IEVDEETIVSSTGALSLKK-----------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQF 965 (1074)
Q Consensus 903 i~~~~~~v~t~~~~~~~~~-----------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i 965 (1074)
+++....++++++++.+.. |..|.++|.+||++++. .++ +.+++++.+.+.+.|++.||++
T Consensus 266 i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l-~~~d~~~~~~~~~~l~~~gv~i 343 (598)
T 2x8g_A 266 IPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILL-RGFDQQMAEKVGDYMENHGVKF 343 (598)
T ss_dssp STTHHHHCEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSS-TTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCCcccceEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCc-CcCCHHHHHHHHHHHHhCCCEE
Confidence 5544445667777765432 88889999999999988 666 7899999999999999999999
Q ss_pred EeCceEEEEEec------C---CeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCC
Q psy14927 966 KLGTKVTGASKS------G---DNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRF 1036 (1074)
Q Consensus 966 ~~~~~v~~i~~~------~---~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~ 1036 (1074)
++++.+.++... + +.+.+.+... +|+..++++|.||+|+|++|+++++.++..|++++++|+|.||+++
T Consensus 344 ~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~--~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~ 421 (598)
T 2x8g_A 344 AKLCVPDEIKQLKVVDTENNKPGLLLVKGHYT--DGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDE 421 (598)
T ss_dssp EETEEEEEEEEEECCBTTTTBCCEEEEEEEET--TSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCTTS
T ss_pred EECCeEEEEEeccccccccCCCceEEEEEEeC--CCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCCCC
Confidence 999988888642 1 3344544321 2444456699999999999999986667889999999999999999
Q ss_pred CCCCCCEEEecccCC-CCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1037 QTVIPNIFAIGDCIH-GPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1037 ~ts~~~IyAiGD~~~-~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
+|++|||||+|||+. .+.++..|..+|+.+|.+|++.
T Consensus 422 ~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 422 QTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp BCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcC
Confidence 999999999999954 4778999999999999999863
No 34
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.96 E-value=2.1e-29 Score=291.59 Aligned_cols=250 Identities=18% Similarity=0.260 Sum_probs=203.5
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhcccccc-ccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEE
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGV-KLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKI 866 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~-~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~ 866 (1074)
+.+||||||||||++||..|.. +++++.+..+. .+.++........ .+++.....+++.+.||+++.| +|+.
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~-~~~l~~~~~~~~~~~~i~~~~~~~V~~ 87 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKS-IDDILIKKNDWYEKNNIKVITSEFATS 87 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCC-GGGTBSSCHHHHHHTTCEEECSCCEEE
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCC-HHHccCCCHHHHHHCCCEEEeCCEEEE
Confidence 5569999999999999999965 88888876543 3334443332221 2455556778888899999999 6999
Q ss_pred ecCCeEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCCCccee---chhhHhcchH--------------------
Q psy14927 867 TGPNTVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVDEETIV---SSTGALSLKK-------------------- 921 (1074)
Q Consensus 867 id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~~v~---t~~~~~~~~~-------------------- 921 (1074)
+|++...|++++| .++.||+||||||++|. ++||.+ +++ +.++...+..
T Consensus 88 id~~~~~v~~~~g--~~~~yd~lvlAtG~~p~~p~i~G~~----~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~ 161 (385)
T 3klj_A 88 IDPNNKLVTLKSG--EKIKYEKLIIASGSIANKIKVPHAD----EIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIEL 161 (385)
T ss_dssp EETTTTEEEETTS--CEEECSEEEECCCEEECCCCCTTCS----CEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHH
T ss_pred EECCCCEEEECCC--CEEECCEEEEecCCCcCCCCCCCCC----CeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHH
Confidence 9998888989988 68999999999999874 344443 443 4555554432
Q ss_pred hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCE
Q psy14927 922 GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDA 1001 (1074)
Q Consensus 922 A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~ 1001 (1074)
|..+++.|.+||++++.++++++.+++.+.+.+.+.+++.||++++++.+.++ . +++++|.
T Consensus 162 A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i------------g-------~~~~~D~ 222 (385)
T 3klj_A 162 AQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM------------G-------DLIRSSC 222 (385)
T ss_dssp HHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC------------H-------HHHHHSE
T ss_pred HHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc------------C-------eEEecCe
Confidence 78888899999999999999855589999999999999999999999888766 1 3588999
Q ss_pred EEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCC----CCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1002 LLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIH----GPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1002 vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~----~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
||+++|++|++++ ++.+|++.+ +| |.||++++|+.|+|||+|||+. .+..+..|..||+.||.||+|.
T Consensus 223 vv~a~G~~p~~~~--~~~~gl~~~-~g-i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 294 (385)
T 3klj_A 223 VITAVGVKPNLDF--IKDTEIASK-RG-ILVNDHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGE 294 (385)
T ss_dssp EEECCCEEECCGG--GTTSCCCBS-SS-EEECTTCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTC
T ss_pred EEECcCcccChhh--hhhcCCCcC-CC-EEECCCcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCC
Confidence 9999999999988 677888876 45 9999999999999999999997 3568999999999999999975
No 35
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.96 E-value=1.7e-28 Score=291.01 Aligned_cols=266 Identities=18% Similarity=0.249 Sum_probs=198.1
Q ss_pred hhhhhccccchHHHHHHHhh-------hhhhhccccccccc-hhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEE
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVKLN-LETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKI 866 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~~~-~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~ 866 (1074)
+||||||||||++||.+|++ +++|+.+..+.... +.............+.....+.+.+.|++++.+ +|+.
T Consensus 4 ~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~~ 83 (452)
T 3oc4_A 4 KIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVVA 83 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEEE
T ss_pred CEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEEE
Confidence 49999999999999999998 68888876653221 111111111112344444567778899999887 6888
Q ss_pred ecCCeEEEEeC-CCCeeEEEcCeEEEccCCCCC--CCCCCCCCCcceechhhHhcc------hH----------------
Q psy14927 867 TGPNTVTVIKS-DGSTEEVKTKNILIATGSEVT--PFPGIEVDEETIVSSTGALSL------KK---------------- 921 (1074)
Q Consensus 867 id~~~~~v~~~-~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~~v~t~~~~~~~------~~---------------- 921 (1074)
+++....+.+. .++..++.||+||||||++|. ++||.. ...++++.++... ..
T Consensus 84 id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~--~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E 161 (452)
T 3oc4_A 84 MDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQ--TEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGME 161 (452)
T ss_dssp EETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCCCBTTT--CTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHH
T ss_pred EECCCCEEEEEecCceEEEEcCEEEECCCcccCCCCCCCCC--CCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHH
Confidence 88654444331 222368999999999999984 344442 2445554332111 11
Q ss_pred -hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcC
Q psy14927 922 -GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCD 1000 (1074)
Q Consensus 922 -A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D 1000 (1074)
|..+.++|.+||++++.+++++..+++++.+.+.+.+++.||++++++.|++++.+++++.|.+.+ + ++++|
T Consensus 162 ~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~------g-~i~aD 234 (452)
T 3oc4_A 162 AIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSE------Q-EISCD 234 (452)
T ss_dssp HHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESS------C-EEEES
T ss_pred HHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECC------C-EEEeC
Confidence 788889999999999999998445899999999999999999999999999999655566555432 3 79999
Q ss_pred EEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCC----------CcHHHHHHHHHHHHHHh
Q psy14927 1001 ALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGP----------MLAHKAEDEGIVCVEGI 1070 (1074)
Q Consensus 1001 ~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~----------~~~~~A~~~G~~aA~~I 1070 (1074)
.||+|+|++|+++++ ... ++++++|+|.||++++|+.|||||+|||+..+ +++..|..+|+.||.||
T Consensus 235 ~Vv~A~G~~p~~~~l--~~~-~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i 311 (452)
T 3oc4_A 235 SGIFALNLHPQLAYL--DKK-IQRNLDQTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNL 311 (452)
T ss_dssp EEEECSCCBCCCSSC--CTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSS
T ss_pred EEEECcCCCCChHHH--Hhh-hccCCCCCEEECcCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHh
Confidence 999999999999974 333 88899999999999999999999999999753 58999999999999999
Q ss_pred hCC
Q psy14927 1071 AGD 1073 (1074)
Q Consensus 1071 ~~~ 1073 (1074)
++.
T Consensus 312 ~g~ 314 (452)
T 3oc4_A 312 EEK 314 (452)
T ss_dssp SSC
T ss_pred cCC
Confidence 975
No 36
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.96 E-value=2.9e-29 Score=295.40 Aligned_cols=265 Identities=18% Similarity=0.238 Sum_probs=202.3
Q ss_pred hhhhhhccccchHHHHHHHhh-------hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEe
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKIT 867 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~i 867 (1074)
|+|||||||+||+++|..|++ +++++.+.+...+.+..+..+.... +++...+.+.+++.||+|+.++|+.|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~-~~i~~~~~~~~~~~gv~~i~~~v~~I 81 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKF-EDISVPLAPLLPKFNIEFINEKAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCG-GGSEEESTTTGGGGTEEEECSCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCH-HHhhhcHHHHHHHCCcEEEEeEEEEE
Confidence 349999999999999999987 7888887766666565555443322 55666677888888999999999999
Q ss_pred cCCeEEEEeCCCCeeEEEcCeEEEccCCCC-CCCCCCCCCCcceechhhHhcchH-------------------------
Q psy14927 868 GPNTVTVIKSDGSTEEVKTKNILIATGSEV-TPFPGIEVDEETIVSSTGALSLKK------------------------- 921 (1074)
Q Consensus 868 d~~~~~v~~~~G~~~~i~~d~lIIATG~~p-~~ipgi~~~~~~v~t~~~~~~~~~------------------------- 921 (1074)
|++..+|++++| .++.||+||||||+++ +++||+......+.+.++...+.+
T Consensus 82 d~~~~~V~~~~g--~~i~YD~LViAtG~~~~~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~ 159 (430)
T 3hyw_A 82 DPDANTVTTQSG--KKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGP 159 (430)
T ss_dssp ETTTTEEEETTC--CEEECSEEEECCCCEEECCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHH
T ss_pred ECCCCEEEECCC--CEEECCEEEEeCCCCccCCccCcccCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHH
Confidence 999999999999 6899999999999975 234554322233445555543332
Q ss_pred --------hhHHhhcC----CcEEEEecCCccC--CCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEee
Q psy14927 922 --------GSVWGRLG----AEVTAIEFMNAIG--GMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIEN 987 (1074)
Q Consensus 922 --------A~~l~~~G----~~Vtlv~~~~~~~--~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~ 987 (1074)
+..+.+.| .+|++++..+.+. .+...+...+.+.+.++++||++++++.|+++++ +. +.+++
T Consensus 160 ~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~--~~--~~~~~ 235 (430)
T 3hyw_A 160 AYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEP--DK--VIYED 235 (430)
T ss_dssp HHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECS--SE--EEEEC
T ss_pred HHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEeC--Cc--eEEEe
Confidence 22334444 4789998877653 1345677788899999999999999999999976 44 33444
Q ss_pred ccCCCCceEEEcCEEEEccCCcccCCccCcccc--CcccCCCCCeeeCCCCC-CCCCCEEEecccCCC------------
Q psy14927 988 VKDPTKKEELSCDALLVCVGRRPYTHNLGLEEI--GIEKDEKGRVPVNSRFQ-TVIPNIFAIGDCIHG------------ 1052 (1074)
Q Consensus 988 ~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~--gl~ld~~G~I~Vd~~~~-ts~~~IyAiGD~~~~------------ 1052 (1074)
. +|+++++++|+++|++|.+|+.. +... ++..+.+|+|.||+++| |++|||||+|||++.
T Consensus 236 ~--~g~~~~i~~d~vi~~~G~~~~~~---~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~ 310 (430)
T 3hyw_A 236 L--NGNTHEVPAKFTMFMPSFQGPEV---VASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGV 310 (430)
T ss_dssp T--TSCEEEEECSEEEEECEEECCHH---HHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCC
T ss_pred e--CCCceEeecceEEEeccCCCchH---HHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCcc
Confidence 2 36678999999999999999854 2333 34456678999999999 899999999999863
Q ss_pred CCcHHHHHHHHHHHHHHhh
Q psy14927 1053 PMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1053 ~~~~~~A~~~G~~aA~~I~ 1071 (1074)
|++++.|.+||+.+|+||+
T Consensus 311 pk~a~~A~~qg~~~A~Ni~ 329 (430)
T 3hyw_A 311 PKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp CCCHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 4678999999999999997
No 37
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.96 E-value=2.4e-29 Score=294.36 Aligned_cols=264 Identities=21% Similarity=0.294 Sum_probs=205.0
Q ss_pred hhhhhccccchHHHHHHHhh-------hhhhhccccccc-cchhh-hhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEE
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVK-LNLET-MMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGK 865 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~-~~~~~-~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~ 865 (1074)
+|||||||+||+++|..|++ +++++.+..+.. +.+.. +..+... ...+ ....+.+.+.||+++.+ +|+
T Consensus 4 ~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~-~~~~-~~~~~~~~~~~i~~~~~~~v~ 81 (410)
T 3ef6_A 4 HVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLE-RPPI-LAEADWYGEARIDMLTGPEVT 81 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSS-SCCB-SSCTTHHHHTTCEEEESCCEE
T ss_pred CEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCC-HHHh-cCCHHHHHHCCCEEEeCCEEE
Confidence 59999999999999999998 667776654332 11111 1111111 1223 33455667789999999 899
Q ss_pred EecCCeEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCCCccee-chhhHhcchH--------------------h
Q psy14927 866 ITGPNTVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVDEETIV-SSTGALSLKK--------------------G 922 (1074)
Q Consensus 866 ~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~~v~-t~~~~~~~~~--------------------A 922 (1074)
.+++....|.+.+| .++.||+||||||++|. ++||........+ +.++...+.. |
T Consensus 82 ~id~~~~~v~~~~g--~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A 159 (410)
T 3ef6_A 82 ALDVQTRTISLDDG--TTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVA 159 (410)
T ss_dssp EEETTTTEEEETTS--CEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHH
T ss_pred EEECCCCEEEECCC--CEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHH
Confidence 99998888888888 68999999999999874 3455432222222 5555544332 7
Q ss_pred hHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEE
Q psy14927 923 SVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDAL 1002 (1074)
Q Consensus 923 ~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~v 1002 (1074)
..+.+.|.+||++++.+.++++.+++.+.+.+.+.+++.||++++++.|+++.+++....|++.+ ++++++|.|
T Consensus 160 ~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~d------g~~i~aD~V 233 (410)
T 3ef6_A 160 TTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASD------GRSFVADSA 233 (410)
T ss_dssp HHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETT------SCEEECSEE
T ss_pred HHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECC------CCEEEcCEE
Confidence 78888999999999999988445889999999999999999999999999999865444666654 468999999
Q ss_pred EEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCCC---------cHHHHHHHHHHHHHHhhCC
Q psy14927 1003 LVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPM---------LAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1003 i~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~~---------~~~~A~~~G~~aA~~I~~~ 1073 (1074)
|+|+|.+|++++ ++.+|++++ +| |.||++++|+.|+|||+|||+..+. .+..|..||+.||.||+|.
T Consensus 234 v~a~G~~p~~~l--~~~~gl~~~-~g-i~vd~~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~ 309 (410)
T 3ef6_A 234 LICVGAEPADQL--ARQAGLACD-RG-VIVDHCGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGK 309 (410)
T ss_dssp EECSCEEECCHH--HHHTTCCBS-SS-EECCTTSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred EEeeCCeecHHH--HHhCCCccC-Ce-EEEccCeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCC
Confidence 999999999987 678889887 45 9999999999999999999987542 4799999999999999985
No 38
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.96 E-value=3e-28 Score=284.62 Aligned_cols=264 Identities=19% Similarity=0.289 Sum_probs=206.3
Q ss_pred hhhhhhccccchHHHHHHHhh-------hhhhhccccccc-cchh-hhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEE
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVK-LNLE-TMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGK 865 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~-~~~~-~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~ 865 (1074)
++|||||||++|+++|..|++ +++++.+..+.. +.+. .+..+.. ....+.......+...+|+++..+|+
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~-~~~~~~~~~~~~~~~~~i~~~~~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGG-DPNSLMFRPEKFFQDQAIELISDRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCC-CTTSSBSSCHHHHHHTTEEEECCCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCC-CHHHccCCCHHHHHhCCCEEEEEEEE
Confidence 349999999999999999998 677776644321 1111 1111111 12344445667778899999998899
Q ss_pred EecCCeEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCCCccee---chhhHhcchH-------------------
Q psy14927 866 ITGPNTVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVDEETIV---SSTGALSLKK------------------- 921 (1074)
Q Consensus 866 ~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~~v~---t~~~~~~~~~------------------- 921 (1074)
.+++....|++.+| .++.||+||||||++|. ++||.. ...++ +.++...+..
T Consensus 81 ~id~~~~~v~~~~g--~~~~~d~lvlAtG~~p~~~~i~g~~--~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e 156 (404)
T 3fg2_P 81 SIDREGRKLLLASG--TAIEYGHLVLATGARNRMLDVPNAS--LPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLE 156 (404)
T ss_dssp EEETTTTEEEESSS--CEEECSEEEECCCEEECCCCSTTTT--STTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHH
T ss_pred EEECCCCEEEECCC--CEEECCEEEEeeCCCccCCCCCCCC--CCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHH
Confidence 99988888888888 68999999999999874 344442 23344 3444433221
Q ss_pred -hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeE-EEEEeeccCCCCceEEEc
Q psy14927 922 -GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNI-TVTIENVKDPTKKEELSC 999 (1074)
Q Consensus 922 -A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~~~~i~~ 999 (1074)
|..+.+.|.+||++++.+.++++.+++.+.+.+.+.+++.||++++++.|+++..+++.+ .|.+.+ ++++++
T Consensus 157 ~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~d------G~~i~a 230 (404)
T 3fg2_P 157 FAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSD------GNTLPC 230 (404)
T ss_dssp HHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETT------SCEEEC
T ss_pred HHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCC------CCEEEc
Confidence 777888999999999999998566899999999999999999999999999999865553 466554 458999
Q ss_pred CEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCCC----------cHHHHHHHHHHHHHH
Q psy14927 1000 DALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPM----------LAHKAEDEGIVCVEG 1069 (1074)
Q Consensus 1000 D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~~----------~~~~A~~~G~~aA~~ 1069 (1074)
|.||+|+|.+|++++ +..+|+.++ +| |.||++++|+.|+|||+|||+..+. .+..|..||+.||.|
T Consensus 231 D~Vv~a~G~~p~~~l--~~~~gl~~~-~G-i~vd~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~ 306 (404)
T 3fg2_P 231 DLVVVGVGVIPNVEI--AAAAGLPTA-AG-IIVDQQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAAR 306 (404)
T ss_dssp SEEEECCCEEECCHH--HHHTTCCBS-SS-EEECTTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHH
T ss_pred CEEEECcCCccCHHH--HHhCCCCCC-CC-EEECCCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHH
Confidence 999999999999987 678888887 45 9999999999999999999987532 478999999999999
Q ss_pred hhCC
Q psy14927 1070 IAGD 1073 (1074)
Q Consensus 1070 I~~~ 1073 (1074)
|+|.
T Consensus 307 i~g~ 310 (404)
T 3fg2_P 307 LTGD 310 (404)
T ss_dssp TTTC
T ss_pred hCCC
Confidence 9985
No 39
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.96 E-value=1.1e-28 Score=284.14 Aligned_cols=255 Identities=18% Similarity=0.231 Sum_probs=198.4
Q ss_pred hhhhhccccchHHHHHHHhh----hhhhhcccccc-ccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEecC
Q psy14927 796 VVLNTLGNCAAVQANYHLAT----KLFTQAGDKGV-KLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITGP 869 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~----~l~e~~~~~g~-~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id~ 869 (1074)
+||||||||||++||..|++ +++|+.+..+. ...+........ ..+.+.....+.+.+.||+++.| +|+.+|+
T Consensus 10 ~vvIIGgG~AGl~aA~~l~~~g~V~lie~~~~~~~~~~~l~~~~~g~~-~~~~~~~~~~~~~~~~~v~~~~g~~v~~id~ 88 (367)
T 1xhc_A 10 KVVIVGNGPGGFELAKQLSQTYEVTVIDKEPVPYYSKPMLSHYIAGFI-PRNRLFPYSLDWYRKRGIEIRLAEEAKLIDR 88 (367)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSEEEEECSSSSCCCCSTTHHHHHTTSS-CGGGGCSSCHHHHHHHTEEEECSCCEEEEET
T ss_pred cEEEECCcHHHHHHHHHHhhcCCEEEEECCCCCccccchhHHHHhCCC-CHHHhccCCHHHHHhCCcEEEECCEEEEEEC
Confidence 49999999999999999987 67887664322 112222221111 12344444566777889999999 5899998
Q ss_pred CeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCCccee---chhhHhcch------H--------------hhHHh
Q psy14927 870 NTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDEETIV---SSTGALSLK------K--------------GSVWG 926 (1074)
Q Consensus 870 ~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~~~v~---t~~~~~~~~------~--------------A~~l~ 926 (1074)
..+.|+ .+| .++.||+||||||++|. +|.+++ ...++ +.+++..+. + |..|.
T Consensus 89 ~~~~V~-~~g--~~~~~d~lViATGs~p~-~p~i~G-~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~ 163 (367)
T 1xhc_A 89 GRKVVI-TEK--GEVPYDTLVLATGARAR-EPQIKG-KEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLA 163 (367)
T ss_dssp TTTEEE-ESS--CEEECSEEEECCCEEEC-CCCSBT-GGGEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHH
T ss_pred CCCEEE-ECC--cEEECCEEEECCCCCCC-CCCCCC-cCCEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHH
Confidence 877777 566 57999999999999884 333444 33444 445544331 1 88888
Q ss_pred hcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEcc
Q psy14927 927 RLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCV 1006 (1074)
Q Consensus 927 ~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~ 1006 (1074)
+.|.+||++++.++++ + +++++.+.+.+.+++.||+++++++|++++. + .+++.+ ++ +++|.||+|+
T Consensus 164 ~~g~~Vtlv~~~~~~l-~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~--~--~v~~~~------g~-i~~D~vi~a~ 230 (367)
T 1xhc_A 164 EAGYHVKLIHRGAMFL-G-LDEELSNMIKDMLEETGVKFFLNSELLEANE--E--GVLTNS------GF-IEGKVKICAI 230 (367)
T ss_dssp HTTCEEEEECSSSCCT-T-CCHHHHHHHHHHHHHTTEEEECSCCEEEECS--S--EEEETT------EE-EECSCEEEEC
T ss_pred hCCCEEEEEeCCCeec-c-CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEe--e--EEEECC------CE-EEcCEEEECc
Confidence 9999999999999998 5 9999999999999999999999999999973 3 355443 34 9999999999
Q ss_pred CCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCC----CCcHHHHHHHHHHHHHHhhCC
Q psy14927 1007 GRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG----PMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1007 G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~----~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
|++|++++ ++.+|++++ +| |.||++++|+.|||||+|||+.. ++++..|..||+.||.||++.
T Consensus 231 G~~p~~~l--l~~~gl~~~-~g-i~Vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 297 (367)
T 1xhc_A 231 GIVPNVDL--ARRSGIHTG-RG-ILIDDNFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGE 297 (367)
T ss_dssp CEEECCHH--HHHTTCCBS-SS-EECCTTSBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred CCCcCHHH--HHhCCCCCC-CC-EEECCCcccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCC
Confidence 99999986 678888876 45 99999999999999999999752 468999999999999999975
No 40
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.96 E-value=4e-28 Score=284.73 Aligned_cols=265 Identities=19% Similarity=0.282 Sum_probs=207.3
Q ss_pred chhhhhhccccchHHHHHHHhh-------hhhhhccccccc-cchh-hhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-e
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVK-LNLE-TMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-H 863 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~-~~~~-~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~ 863 (1074)
+++|||||||++|+++|..|++ +++++.+..+.. +.+. .+..... ....+.......+...||+++.+ +
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~ 87 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREK-TFERICIRPAQFWEDKAVEMKLGAE 87 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSS-CSGGGBSSCHHHHHHTTEEEEETCC
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCC-CHHHhccCCHHHHHHCCcEEEeCCE
Confidence 4569999999999999999998 677776654332 1111 1111111 12344445567778899999999 8
Q ss_pred EEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCCCccee---chhhHhcch-------H----------
Q psy14927 864 GKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVDEETIV---SSTGALSLK-------K---------- 921 (1074)
Q Consensus 864 v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~~v~---t~~~~~~~~-------~---------- 921 (1074)
|+.+++....|.+.+| .++.||+||||||++|. ++||... ..++ +.++...+. +
T Consensus 88 v~~id~~~~~v~~~~g--~~~~~d~lvlAtG~~~~~~~i~g~~~--~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~ 163 (415)
T 3lxd_A 88 VVSLDPAAHTVKLGDG--SAIEYGKLIWATGGDPRRLSCVGADL--AGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYI 163 (415)
T ss_dssp EEEEETTTTEEEETTS--CEEEEEEEEECCCEECCCCBTTSSCC--BTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHH
T ss_pred EEEEECCCCEEEECCC--CEEEeeEEEEccCCccCCCCCCCccc--cCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHH
Confidence 9999998888888888 68999999999999874 3455432 3333 444433221 1
Q ss_pred ----hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeE-EEEEeeccCCCCceE
Q psy14927 922 ----GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNI-TVTIENVKDPTKKEE 996 (1074)
Q Consensus 922 ----A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~~~~ 996 (1074)
|..+.+.|.+||++++.+++++..+++.+.+.+.+.+++.||++++++.|+++..+++.+ .|.+.+ +++
T Consensus 164 g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~d------G~~ 237 (415)
T 3lxd_A 164 GLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQD------GSV 237 (415)
T ss_dssp HHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESS------SCE
T ss_pred HHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCC------CCE
Confidence 777888999999999999998556899999999999999999999999999999865553 566654 468
Q ss_pred EEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCCC-----------cHHHHHHHHHH
Q psy14927 997 LSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPM-----------LAHKAEDEGIV 1065 (1074)
Q Consensus 997 i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~~-----------~~~~A~~~G~~ 1065 (1074)
+++|.||+|+|.+|++++ +..+|+.++ +| |.||++++|+.|+|||+|||+..+. .+..|..||+.
T Consensus 238 i~aD~Vv~a~G~~p~~~l--~~~~gl~~~-~g-i~vd~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~ 313 (415)
T 3lxd_A 238 IPADIVIVGIGIVPCVGA--LISAGASGG-NG-VDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATA 313 (415)
T ss_dssp EECSEEEECSCCEESCHH--HHHTTCCCS-SS-EECCTTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHH
T ss_pred EEcCEEEECCCCccChHH--HHhCCCCcC-CC-EEECCCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHH
Confidence 999999999999999987 678888877 45 9999999999999999999987543 36899999999
Q ss_pred HHHHhhCC
Q psy14927 1066 CVEGIAGD 1073 (1074)
Q Consensus 1066 aA~~I~~~ 1073 (1074)
||.||+|.
T Consensus 314 aa~~i~g~ 321 (415)
T 3lxd_A 314 AAKDICGA 321 (415)
T ss_dssp HHHHHTTC
T ss_pred HHHHhcCC
Confidence 99999985
No 41
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.95 E-value=7.5e-28 Score=285.30 Aligned_cols=265 Identities=18% Similarity=0.251 Sum_probs=196.7
Q ss_pred hhhhhhccccchHHHHHHHhh-------hhhhhcccccccc-chhhhhhhhhHHHhhhhhhHHHHh-hhCCeEEEee-eE
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVKL-NLETMMGTKSAAVKALTGGIAHLF-KSNKVTQLNG-HG 864 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~~-~~~~~~~~~~~~~~~l~~~~~~~l-~~~gV~~~~g-~v 864 (1074)
++||||||||+|+++|..|++ +++++.+..+... .++....... ....+.....+.+ .+.||+++.+ +|
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLS-TPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-------------------------CTHHHHTTCEEETTCEE
T ss_pred CcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCC-CHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 459999999999999999988 6788777554322 1222222221 1233333333444 6789999999 79
Q ss_pred EEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCCCccee---chhhHhcch---------H---------
Q psy14927 865 KITGPNTVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVDEETIV---SSTGALSLK---------K--------- 921 (1074)
Q Consensus 865 ~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~~v~---t~~~~~~~~---------~--------- 921 (1074)
+.++.....+.+.+| ..++.||+||||||++|. ++||... ..++ +..+...+. .
T Consensus 83 ~~i~~~~~~v~~~~g-~~~~~~d~lviAtG~~p~~p~i~G~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~ 159 (449)
T 3kd9_A 83 IEVDTGYVRVRENGG-EKSYEWDYLVFANGASPQVPAIEGVNL--KGVFTADLPPDALAIREYMEKYKVENVVIIGGGYI 159 (449)
T ss_dssp EEECSSEEEEECSSS-EEEEECSEEEECCCEEECCCSCBTTTS--TTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHH
T ss_pred EEEecCCCEEEECCc-eEEEEcCEEEECCCCCCCCCCCCCCCC--CCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHH
Confidence 999998888877665 247999999999999873 3445432 2333 233332211 1
Q ss_pred ----hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEE
Q psy14927 922 ----GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEEL 997 (1074)
Q Consensus 922 ----A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i 997 (1074)
|..+.+.|.+||++++.+++++..+++++.+.+.+.+++. |++++++.+.++..++ .+...+.+ +.++
T Consensus 160 g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~~------g~~i 231 (449)
T 3kd9_A 160 GIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKVVTD------AGEY 231 (449)
T ss_dssp HHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEEEET------TEEE
T ss_pred HHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEEEeC------CCEE
Confidence 7788899999999999999993349999999999999999 9999999999998754 33222333 3689
Q ss_pred EcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCC-------C---CCcHHHHHHHHHHHH
Q psy14927 998 SCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIH-------G---PMLAHKAEDEGIVCV 1067 (1074)
Q Consensus 998 ~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~-------~---~~~~~~A~~~G~~aA 1067 (1074)
++|.||+|+|++|++++ ++.+|++++++|+|.||++++|+.|||||+|||+. . ++++..|..+|+.+|
T Consensus 232 ~~D~Vv~a~G~~p~~~l--~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa 309 (449)
T 3kd9_A 232 KAELVILATGIKPNIEL--AKQLGVRIGETGAIWTNEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAG 309 (449)
T ss_dssp ECSEEEECSCEEECCHH--HHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHH
T ss_pred ECCEEEEeeCCccCHHH--HHhCCccCCCCCCEEECCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHH
Confidence 99999999999999987 67889999999999999999999999999999984 1 468999999999999
Q ss_pred HHhhCC
Q psy14927 1068 EGIAGD 1073 (1074)
Q Consensus 1068 ~~I~~~ 1073 (1074)
.||+|.
T Consensus 310 ~~i~g~ 315 (449)
T 3kd9_A 310 SNIAGK 315 (449)
T ss_dssp HHHTTC
T ss_pred HHhcCC
Confidence 999985
No 42
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.95 E-value=5.8e-28 Score=288.10 Aligned_cols=269 Identities=19% Similarity=0.274 Sum_probs=191.7
Q ss_pred hhhhhhccccchHHHHHHHhh-------hhhhhcccccccc-chhhhhhhhhHHHhhh-------hhhHHHHhhhCCeEE
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVKL-NLETMMGTKSAAVKAL-------TGGIAHLFKSNKVTQ 859 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~~-~~~~~~~~~~~~~~~l-------~~~~~~~l~~~gV~~ 859 (1074)
++||||||||+|+++|..|++ +++|+.+..+... .++............+ ......+....|+++
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 83 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVEA 83 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcEE
Confidence 359999999999999999987 7788877653211 0111111111111222 222333334579999
Q ss_pred Eee-eEEEecCCeEEEEeC---CCCeeEEEcCeEEEccCCCCC--CCCCCCCCCccee---chhhHhcch--------H-
Q psy14927 860 LNG-HGKITGPNTVTVIKS---DGSTEEVKTKNILIATGSEVT--PFPGIEVDEETIV---SSTGALSLK--------K- 921 (1074)
Q Consensus 860 ~~g-~v~~id~~~~~v~~~---~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~~v~---t~~~~~~~~--------~- 921 (1074)
+.+ +|+.+++....+.+. +|...++.||+||||||++|. ++||.. ...++ +..+...+. +
T Consensus 84 ~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~--~~~v~~~~~~~~~~~l~~~l~~~~~~~ 161 (472)
T 3iwa_A 84 LVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMD--LAGVTPVTNLDEAEFVQHAISAGEVSK 161 (472)
T ss_dssp ECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCSCTTTT--SBTEEECCSHHHHHHHHHHCCTTSCSE
T ss_pred EECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCCCC--CCCEEEeCCHHHHHHHHHHhhcCCCCE
Confidence 886 688888765555443 364458999999999999873 355543 22332 333333322 1
Q ss_pred -------------hhHHhhc-CCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEee
Q psy14927 922 -------------GSVWGRL-GAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIEN 987 (1074)
Q Consensus 922 -------------A~~l~~~-G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~ 987 (1074)
|..+.+. |.+||++++.+.+++..+++++.+.+.+.+++.||++++++.|.+++.+++.+.+.+.+
T Consensus 162 vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~ 241 (472)
T 3iwa_A 162 AVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITD 241 (472)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEES
T ss_pred EEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeC
Confidence 7778888 99999999999998338999999999999999999999999999999866666676654
Q ss_pred ccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCC-------C---CCcHH
Q psy14927 988 VKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIH-------G---PMLAH 1057 (1074)
Q Consensus 988 ~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~-------~---~~~~~ 1057 (1074)
++++++|.||+|+|++|++++ +..+|++++++|+|.||++++|+.|||||+|||+. . +++++
T Consensus 242 ------g~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~ 313 (472)
T 3iwa_A 242 ------KRTLDADLVILAAGVSPNTQL--ARDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGS 313 (472)
T ss_dssp ------SCEEECSEEEECSCEEECCHH--HHHHTCCBCTTCCEECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTT
T ss_pred ------CCEEEcCEEEECCCCCcCHHH--HHhCCccCCCCCCEEECCCcccCCCCEEEeccceecccccCCceeecchHH
Confidence 358999999999999999986 57789999999999999999999999999999983 2 35788
Q ss_pred HHHHHHHHHHHHhhCC
Q psy14927 1058 KAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1058 ~A~~~G~~aA~~I~~~ 1073 (1074)
.|..||+++|.||+|.
T Consensus 314 ~A~~~g~~aa~~i~g~ 329 (472)
T 3iwa_A 314 MANRQGRVIGTNLADG 329 (472)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCC
Confidence 9999999999999975
No 43
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.95 E-value=8e-28 Score=293.76 Aligned_cols=267 Identities=21% Similarity=0.274 Sum_probs=201.5
Q ss_pred hhhhhccccchHHHHHHHhh-------hhhhhcccccccc-chhhhhhhhh-HHHhhhhhhHHHHhhhCCeEEEee-eEE
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVKL-NLETMMGTKS-AAVKALTGGIAHLFKSNKVTQLNG-HGK 865 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~~-~~~~~~~~~~-~~~~~l~~~~~~~l~~~gV~~~~g-~v~ 865 (1074)
+||||||||||+++|..|++ +++++.+..+... .++....... .....+......+..+.||+++.+ +|+
T Consensus 3 ~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 82 (565)
T 3ntd_A 3 KILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEVV 82 (565)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEEE
T ss_pred cEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEEE
Confidence 49999999999999999988 6888877655321 1111111111 111223333445555689999876 688
Q ss_pred EecCCeEEEEeC---CCCeeEEEcCeEEEccCCCCC--CCCCCCCCCcceechhh---Hhcch---------H-------
Q psy14927 866 ITGPNTVTVIKS---DGSTEEVKTKNILIATGSEVT--PFPGIEVDEETIVSSTG---ALSLK---------K------- 921 (1074)
Q Consensus 866 ~id~~~~~v~~~---~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~~v~t~~~---~~~~~---------~------- 921 (1074)
.+++....+++. +|...++.||+||||||++|. ++||.. ...+++..+ ...+. .
T Consensus 83 ~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~~--~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG 160 (565)
T 3ntd_A 83 AIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVD--NPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGG 160 (565)
T ss_dssp EEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTCC--STTEECCSSHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred EEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCCC--CCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 888765444443 364568999999999999874 345542 233443222 11111 1
Q ss_pred ------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEe-------------------
Q psy14927 922 ------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASK------------------- 976 (1074)
Q Consensus 922 ------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~------------------- 976 (1074)
|..+.+.|.+||++++.+.++ +.+++++...+.+.+++.||++++++.|.++..
T Consensus 161 ~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 239 (565)
T 3ntd_A 161 FIGLEMMESLHHLGIKTTLLELADQVM-TPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQH 239 (565)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSSC-TTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCC
T ss_pred HHHHHHHHHHHhcCCcEEEEEcCCccc-hhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEecccccccccccccccccccc
Confidence 778889999999999999998 689999999999999999999999999999987
Q ss_pred cCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCC-----
Q psy14927 977 SGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIH----- 1051 (1074)
Q Consensus 977 ~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~----- 1051 (1074)
.++.+.+.+.+ ++++++|.||+|+|++|++++ +...|++++++|+|.||++++|+.|||||+|||+.
T Consensus 240 ~~~~~~v~~~~------g~~i~~D~vi~a~G~~p~~~l--~~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~ 311 (565)
T 3ntd_A 240 IKGHLSLTLSN------GELLETDLLIMAIGVRPETQL--ARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFV 311 (565)
T ss_dssp TTCEEEEEETT------SCEEEESEEEECSCEEECCHH--HHHHTCCBCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTT
T ss_pred CCCcEEEEEcC------CCEEEcCEEEECcCCccchHH--HHhCCcccCCCCCEEECCCcccCCCCEEEeeeeEeecccc
Confidence 34555565533 358999999999999999986 57789999999999999999999999999999983
Q ss_pred --C---CCcHHHHHHHHHHHHHHhhCC
Q psy14927 1052 --G---PMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1052 --~---~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
. +++++.|..||+.||.||+|.
T Consensus 312 ~g~~~~~~~~~~A~~~g~~aa~~i~g~ 338 (565)
T 3ntd_A 312 TGQACLVPLAGPANRQGRMAADNMFGR 338 (565)
T ss_dssp TCCEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred CCceeecccHHHHHHHHHHHHHHhcCC
Confidence 2 357999999999999999985
No 44
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.95 E-value=1.9e-27 Score=282.15 Aligned_cols=266 Identities=18% Similarity=0.218 Sum_probs=197.5
Q ss_pred hhhhhccccchHHHHHHHhh-------hhhhhcccccccc-chhhhhhhhhH--HHhhhhhhHHHHhhhCCeEEEee-eE
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVKL-NLETMMGTKSA--AVKALTGGIAHLFKSNKVTQLNG-HG 864 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~~-~~~~~~~~~~~--~~~~l~~~~~~~l~~~gV~~~~g-~v 864 (1074)
+||||||||+|+++|..|++ +++|+.+..+... .+......... ....+.....+.+.+.||+++.+ .+
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 81 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQV 81 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCEE
Confidence 48999999999999999987 5777766443221 11111111100 12334444566777889999888 48
Q ss_pred EEecC--CeEEEEe-CCCCeeEEEcCeEEEccCCCCC--CCCCCCCCCcceech------hhHhcchH------------
Q psy14927 865 KITGP--NTVTVIK-SDGSTEEVKTKNILIATGSEVT--PFPGIEVDEETIVSS------TGALSLKK------------ 921 (1074)
Q Consensus 865 ~~id~--~~~~v~~-~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~~v~t~------~~~~~~~~------------ 921 (1074)
+.++. ..+.+.. .+|+..++.||+||||||++|. ++||.. ...++++ .++.....
T Consensus 82 ~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~--~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~ 159 (452)
T 2cdu_A 82 TNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGID--SSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGY 159 (452)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTT--STTEEECSSHHHHHHHHHHGGGCSEEEEECCSH
T ss_pred EEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCC--CCCEEEeCcHHHHHHHHHHhccCCeEEEECcCH
Confidence 88874 4444433 2233368999999999999874 344442 2334432 22221111
Q ss_pred -----hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEE-EEEeeccCCCCce
Q psy14927 922 -----GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNIT-VTIENVKDPTKKE 995 (1074)
Q Consensus 922 -----A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~-v~~~~~~~~g~~~ 995 (1074)
|..+.+.|.+||++++.+++++..+++++.+.+.+.+++.||++++++.|+++..+++.+. +. .+ +.
T Consensus 160 ~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~-~~------g~ 232 (452)
T 2cdu_A 160 IGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKT-LD------GK 232 (452)
T ss_dssp HHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEE-TT------SC
T ss_pred HHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEE-eC------CC
Confidence 7888889999999999999984479999999999999999999999999999987545443 32 12 35
Q ss_pred EEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCC----------CCcHHHHHHHHHH
Q psy14927 996 ELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG----------PMLAHKAEDEGIV 1065 (1074)
Q Consensus 996 ~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~----------~~~~~~A~~~G~~ 1065 (1074)
++++|.||+|+|++|++++ ++.. ++++++|+|.||++++|+.|||||+|||+.. +++++.|..||+.
T Consensus 233 ~i~~D~vv~a~G~~p~~~l--l~~~-l~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~ 309 (452)
T 2cdu_A 233 EIKSDIAILCIGFRPNTEL--LKGK-VAMLDNGAIITDEYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRL 309 (452)
T ss_dssp EEEESEEEECCCEEECCGG--GTTT-SCBCTTSCBCCCTTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHH
T ss_pred EEECCEEEECcCCCCCHHH--HHHh-hhcCCCCCEEECCCcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHH
Confidence 7999999999999999987 5566 8888899999999999999999999999973 3689999999999
Q ss_pred HHHHhhCC
Q psy14927 1066 CVEGIAGD 1073 (1074)
Q Consensus 1066 aA~~I~~~ 1073 (1074)
+|.||++.
T Consensus 310 aa~~i~g~ 317 (452)
T 2cdu_A 310 VGLNLTED 317 (452)
T ss_dssp HHHTSSSC
T ss_pred HHHHhCCC
Confidence 99999874
No 45
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.95 E-value=8.7e-28 Score=280.87 Aligned_cols=258 Identities=18% Similarity=0.249 Sum_probs=196.8
Q ss_pred chhhhhhccccchHHHHHHHhh-------hhhhhccccccc-cchh-hhhhhhhHHHhhhhhhHHHHhhhCCeEEEeee-
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVK-LNLE-TMMGTKSAAVKALTGGIAHLFKSNKVTQLNGH- 863 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~-~~~~-~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~- 863 (1074)
+.+||||||||+|+++|..|++ +++++.+..+.. +.+. .+..... .+.+. +. .+.+.||+++.|+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~-~~~~~~v~~~~~~~ 81 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGD--AEKIR--LD-CKRAPEVEWLLGVT 81 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCC--GGGSB--CC-CTTSCSCEEEETCC
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCc--hhhhh--HH-HHHHCCCEEEcCCE
Confidence 4459999999999999999998 567766543321 1111 1111100 11111 11 5567899999995
Q ss_pred EEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCC--C-CCCCCCCcce-echhhHhcchH------------------
Q psy14927 864 GKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTP--F-PGIEVDEETI-VSSTGALSLKK------------------ 921 (1074)
Q Consensus 864 v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~--i-pgi~~~~~~v-~t~~~~~~~~~------------------ 921 (1074)
|+.+++...+|++.+| .++.||+||||||++|.. + ||.. .+.+. .+.+++..+..
T Consensus 82 v~~i~~~~~~v~~~~g--~~~~~d~lviAtG~~~~~~~i~~G~~-~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~ 158 (408)
T 2gqw_A 82 AQSFDPQAHTVALSDG--RTLPYGTLVLATGAAPRALPTLQGAT-MPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGL 158 (408)
T ss_dssp EEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCGGGTTCS-SCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHH
T ss_pred EEEEECCCCEEEECCC--CEEECCEEEECCCCCCCCCCccCCCC-CcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHH
Confidence 9999987777888887 689999999999998743 3 4443 22211 25555543321
Q ss_pred --hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEc
Q psy14927 922 --GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSC 999 (1074)
Q Consensus 922 --A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~ 999 (1074)
|..+.+.|.+||++++.+.+++..+++++...+.+.+++.||++++++.|++++ + + .|++.+ ++++++
T Consensus 159 E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~-~--~v~~~~------g~~i~~ 228 (408)
T 2gqw_A 159 ELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-D-G--VVLLDD------GTRIAA 228 (408)
T ss_dssp HHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T-T--EEEETT------SCEEEC
T ss_pred HHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C-C--EEEECC------CCEEEc
Confidence 788889999999999999998445899999999999999999999999999998 3 3 455543 358999
Q ss_pred CEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCC----------CcHHHHHHHHHHHHHH
Q psy14927 1000 DALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGP----------MLAHKAEDEGIVCVEG 1069 (1074)
Q Consensus 1000 D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~----------~~~~~A~~~G~~aA~~ 1069 (1074)
|.||+|+|++|++++ ++..|++++ +| |.||++++|+.|+|||+|||+..+ ..+..|..||+.+|.|
T Consensus 229 D~vi~a~G~~p~~~l--~~~~gl~~~-~g-i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~ 304 (408)
T 2gqw_A 229 DMVVVGIGVLANDAL--ARAAGLACD-DG-IFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARH 304 (408)
T ss_dssp SEEEECSCEEECCHH--HHHHTCCBS-SS-EECCTTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHH
T ss_pred CEEEECcCCCccHHH--HHhCCCCCC-CC-EEECCCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHH
Confidence 999999999999987 677888887 56 999999999999999999999753 2678999999999999
Q ss_pred hhCC
Q psy14927 1070 IAGD 1073 (1074)
Q Consensus 1070 I~~~ 1073 (1074)
|++.
T Consensus 305 i~g~ 308 (408)
T 2gqw_A 305 LVDP 308 (408)
T ss_dssp HHCT
T ss_pred hcCC
Confidence 9975
No 46
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.95 E-value=2.5e-27 Score=283.75 Aligned_cols=269 Identities=23% Similarity=0.291 Sum_probs=198.3
Q ss_pred hhhhhhccccchHHHHHHHhh--------hhhhhccccccccc-hhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eE
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT--------KLFTQAGDKGVKLN-LETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HG 864 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~--------~l~e~~~~~g~~~~-~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v 864 (1074)
.+||||||||+|+++|..|++ +++|+.+..+.... +.............+.....+.+.+.||+++.+ +|
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~v 115 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESPV 115 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCCE
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCEE
Confidence 569999999999999999986 46776654432211 111111110111334444566677889999888 48
Q ss_pred EEecCCeEEEEeC-CCCeeEEEcCeEEEccCCCCC--CCCCCCC---------CCcceec------hhhHhcch-----H
Q psy14927 865 KITGPNTVTVIKS-DGSTEEVKTKNILIATGSEVT--PFPGIEV---------DEETIVS------STGALSLK-----K 921 (1074)
Q Consensus 865 ~~id~~~~~v~~~-~G~~~~i~~d~lIIATG~~p~--~ipgi~~---------~~~~v~t------~~~~~~~~-----~ 921 (1074)
+.++.....+.+. +|...++.||+||||||++|. ++||... ....+++ +.++.... +
T Consensus 116 ~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 195 (490)
T 2bc0_A 116 QSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIK 195 (490)
T ss_dssp EEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCC
T ss_pred EEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCc
Confidence 8887544444444 543367999999999999874 3444430 0234443 23332221 1
Q ss_pred --------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEee
Q psy14927 922 --------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIEN 987 (1074)
Q Consensus 922 --------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~ 987 (1074)
|..|++.|.+||++++.+++++..+++++.+.+.+.+++.||++++++.|+++..++....+.+ +
T Consensus 196 ~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~ 274 (490)
T 2bc0_A 196 RVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-D 274 (490)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-S
T ss_pred eEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-C
Confidence 7888899999999999999984479999999999999999999999999999987432223443 3
Q ss_pred ccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCC----------CCcHH
Q psy14927 988 VKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG----------PMLAH 1057 (1074)
Q Consensus 988 ~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~----------~~~~~ 1057 (1074)
+.++++|.||+|+|++|++++ ++.. ++++++|+|.||++++|+.|+|||+|||+.. ++++.
T Consensus 275 ------g~~i~~D~Vi~a~G~~p~~~l--l~~~-l~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~ 345 (490)
T 2bc0_A 275 ------KNEYDVDMVILAVGFRPNTTL--GNGK-IDLFRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALAS 345 (490)
T ss_dssp ------SCEEECSEEEECCCEEECCGG--GTTC-SCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEETTTTEEECCCCHH
T ss_pred ------CcEEECCEEEECCCCCcChHH--HHhh-hccCCCCCEEECCCcccCCCCEEEeeeeEEeccccCCceeecccHH
Confidence 357999999999999999987 4555 8888899999999999999999999999973 35899
Q ss_pred HHHHHHHHHHHHhhCC
Q psy14927 1058 KAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1058 ~A~~~G~~aA~~I~~~ 1073 (1074)
.|..||+.||.||++.
T Consensus 346 ~A~~qg~~aa~~i~g~ 361 (490)
T 2bc0_A 346 NAVRTGIVAAHNACGT 361 (490)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCC
Confidence 9999999999999974
No 47
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.95 E-value=2.6e-27 Score=267.37 Aligned_cols=265 Identities=19% Similarity=0.210 Sum_probs=198.5
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhh----hhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeE
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLET----MMGTKSAAVKALTGGIAHLFKSNKVTQLNGHG 864 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v 864 (1074)
+.+|+||||||+|+++|+.|++ +++|+. .|+.+.... ++.........+...+...+.+.|++++.++|
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 92 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIV 92 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEESCE
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEEEEE
Confidence 3569999999999999999998 788876 555543311 11111112245666677888888999999888
Q ss_pred EEecCC--eEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCCC-cceec--hhhHhcch-H--------------h
Q psy14927 865 KITGPN--TVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVDE-ETIVS--STGALSLK-K--------------G 922 (1074)
Q Consensus 865 ~~id~~--~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~-~~v~t--~~~~~~~~-~--------------A 922 (1074)
+.++.. .+.+.+.+| .++.||+||||||+.|. ++|+..... ..+.. ..+..... + |
T Consensus 93 ~~i~~~~~~~~v~~~~g--~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a 170 (323)
T 3f8d_A 93 EKIENRGDEFVVKTKRK--GEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGA 170 (323)
T ss_dssp EEEEEC--CEEEEESSS--CEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHH
T ss_pred EEEEecCCEEEEEECCC--CEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCHhHcCCCEEEEECCCHHHHHHH
Confidence 888754 567777777 58999999999999863 344432211 12211 11111111 1 7
Q ss_pred hHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEE
Q psy14927 923 SVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDAL 1002 (1074)
Q Consensus 923 ~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~v 1002 (1074)
..+.+.|.+|+++++.+.+. + ++. .+.+.+++.||++++++.+.++.++++...|++.+.. +|+..++++|.|
T Consensus 171 ~~l~~~g~~v~~~~~~~~~~-~--~~~---~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~-~g~~~~~~~D~v 243 (323)
T 3f8d_A 171 EILSSYSTKVYLIHRRDTFK-A--QPI---YVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLK-TGEIKELNVNGV 243 (323)
T ss_dssp HHHHHHSSEEEEECSSSSCC-S--CHH---HHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETT-TCCEEEEECSEE
T ss_pred HHHHHhCCeEEEEEeCCCCC-c--CHH---HHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECC-CCceEEEEcCEE
Confidence 77888899999999998887 3 332 2333444569999999999999987555567776533 355568999999
Q ss_pred EEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCC---CCcHHHHHHHHHHHHHHhh
Q psy14927 1003 LVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG---PMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1003 i~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~---~~~~~~A~~~G~~aA~~I~ 1071 (1074)
|+++|++|++++ +...|++++++|+|.||++++|+.|||||+|||+.. ++.+..|+.+|..||.+|+
T Consensus 244 v~a~G~~p~~~~--~~~~g~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (323)
T 3f8d_A 244 FIEIGFDPPTDF--AKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAY 313 (323)
T ss_dssp EECCCEECCHHH--HHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCChhH--HhhcCeeecCCCcEecCCCceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHH
Confidence 999999999887 678899999999999999999999999999999985 7789999999999999986
No 48
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.95 E-value=1.9e-27 Score=275.94 Aligned_cols=262 Identities=18% Similarity=0.255 Sum_probs=198.2
Q ss_pred hhhhhhccccchHHHHHHHhh-------hhhhhccccccccc---hhhhhhhhhHHHhhhhh-hHHHHhhhCCeEEEee-
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVKLN---LETMMGTKSAAVKALTG-GIAHLFKSNKVTQLNG- 862 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~~~---~~~~~~~~~~~~~~l~~-~~~~~l~~~gV~~~~g- 862 (1074)
.+||||||||+|+++|..|++ +++++.. |..+. +........ ....+.. .....+...||+++.+
T Consensus 5 ~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~ 81 (384)
T 2v3a_A 5 APLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPMLSTGFSKNK-DADGLAMAEPGAMAEQLNARILTHT 81 (384)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGGGGGTTTTTC-CHHHHEEECHHHHHHHTTCEEECSC
T ss_pred CcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCcccccHHHhCCC-CHHHhhccCHHHHHHhCCcEEEeCC
Confidence 359999999999999999988 4566543 22221 222222211 1234433 3456667889999987
Q ss_pred eEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCC-cceechhhHhcch---------H-----------
Q psy14927 863 HGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDE-ETIVSSTGALSLK---------K----------- 921 (1074)
Q Consensus 863 ~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~-~~v~t~~~~~~~~---------~----------- 921 (1074)
+|+.+++....|.+.++ ++.||+||||||++|.. |.+++.. ..+++..++.... +
T Consensus 82 ~v~~i~~~~~~v~~~~~---~~~~d~lviAtG~~p~~-p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g 157 (384)
T 2v3a_A 82 RVTGIDPGHQRIWIGEE---EVRYRDLVLAWGAEPIR-VPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIG 157 (384)
T ss_dssp CCCEEEGGGTEEEETTE---EEECSEEEECCCEEECC-CCCBSTTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHH
T ss_pred EEEEEECCCCEEEECCc---EEECCEEEEeCCCCcCC-CCCCCcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHH
Confidence 58888875556666543 79999999999998843 3344332 4566554443221 1
Q ss_pred ---hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEE
Q psy14927 922 ---GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELS 998 (1074)
Q Consensus 922 ---A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~ 998 (1074)
|..+.+.|.+||++++.+.+++..+++.+.+.+.+.+++.||++++++.|.++..+++++.+++.+ +++++
T Consensus 158 ~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~------g~~i~ 231 (384)
T 2v3a_A 158 CEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSD------GEVIP 231 (384)
T ss_dssp HHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETT------SCEEE
T ss_pred HHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECC------CCEEE
Confidence 788889999999999999988433589999999999999999999999999999876666666544 46799
Q ss_pred cCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCC--CC--CcHHHHHHHHHHHHHHhhCC
Q psy14927 999 CDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIH--GP--MLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 999 ~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~--~~--~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
+|.||+|+|++|++++ ++.+|++++ +| |.||++++|+.|||||+|||+. ++ +.+..|..||+.+|.||+|.
T Consensus 232 ~d~vv~a~G~~p~~~l--~~~~g~~~~-~g-i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~ 306 (384)
T 2v3a_A 232 CDLVVSAVGLRPRTEL--AFAAGLAVN-RG-IVVDRSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGN 306 (384)
T ss_dssp ESEEEECSCEEECCHH--HHHTTCCBS-SS-EEECTTCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEECcCCCcCHHH--HHHCCCCCC-CC-EEECCCCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCC
Confidence 9999999999999986 678899887 57 9999999999999999999985 22 25778999999999999975
No 49
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.95 E-value=9.4e-28 Score=282.51 Aligned_cols=266 Identities=19% Similarity=0.261 Sum_probs=199.2
Q ss_pred hhhhhhccccchHHHHHHHhh-------hhhhhccccccc-cchhh-hhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eE
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVK-LNLET-MMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HG 864 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~-~~~~~-~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v 864 (1074)
++||||||||+|+++|..|++ +++++.+..+.. +.+.. +..... ....+.....+.+.+.||+++.| .|
T Consensus 5 ~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 5 DNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKA-TAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCS-CSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCC-ChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 359999999999999999988 566665543211 11110 111100 11223223456677889999998 58
Q ss_pred EEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCC--CCCCCCCC---cc-eechhhHhcchH-----------------
Q psy14927 865 KITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTP--FPGIEVDE---ET-IVSSTGALSLKK----------------- 921 (1074)
Q Consensus 865 ~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~--ipgi~~~~---~~-v~t~~~~~~~~~----------------- 921 (1074)
+.+++....|++.+| .++.||+||||||++|.. +||.+..+ .. +.+.+++..+..
T Consensus 84 ~~i~~~~~~v~~~~g--~~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g 161 (431)
T 1q1r_A 84 TAINRDRQQVILSDG--RALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIG 161 (431)
T ss_dssp EEEETTTTEEEETTS--CEEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHH
T ss_pred EEEECCCCEEEECCC--CEEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHH
Confidence 899876667888887 679999999999998743 34432111 11 125555543321
Q ss_pred ---hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEe--cCCeE-EEEEeeccCCCCce
Q psy14927 922 ---GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASK--SGDNI-TVTIENVKDPTKKE 995 (1074)
Q Consensus 922 ---A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~--~~~~~-~v~~~~~~~~g~~~ 995 (1074)
|..+.+.|.+||++++.+.+++..+++++.+.+.+.+++.||++++++.|.++.. +++.+ .|.+.+ ++
T Consensus 162 ~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~------G~ 235 (431)
T 1q1r_A 162 LEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCED------GT 235 (431)
T ss_dssp HHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETT------SC
T ss_pred HHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCC------CC
Confidence 7888899999999999999884458999999999999999999999999999987 43443 555543 46
Q ss_pred EEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCCC----------cHHHHHHHHHH
Q psy14927 996 ELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPM----------LAHKAEDEGIV 1065 (1074)
Q Consensus 996 ~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~~----------~~~~A~~~G~~ 1065 (1074)
++++|.||+|+|++|++++ ++.+|++++ +| |.||++++|+.|+|||+|||+..+. .+..|..||+.
T Consensus 236 ~i~~D~Vv~a~G~~p~~~l--~~~~gl~~~-~g-i~Vd~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~ 311 (431)
T 1q1r_A 236 RLPADLVIAGIGLIPNCEL--ASAAGLQVD-NG-IVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARK 311 (431)
T ss_dssp EEECSEEEECCCEEECCHH--HHHTTCCBS-SS-EECCTTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHH
T ss_pred EEEcCEEEECCCCCcCcch--hhccCCCCC-CC-EEECCCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHH
Confidence 8999999999999999987 677888886 45 9999999999999999999997532 56889999999
Q ss_pred HHHHhhCC
Q psy14927 1066 CVEGIAGD 1073 (1074)
Q Consensus 1066 aA~~I~~~ 1073 (1074)
+|.||+|.
T Consensus 312 aa~~i~g~ 319 (431)
T 1q1r_A 312 IAAILCGK 319 (431)
T ss_dssp HHHHHTTC
T ss_pred HHHHhcCC
Confidence 99999975
No 50
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.95 E-value=6.1e-27 Score=263.45 Aligned_cols=267 Identities=15% Similarity=0.135 Sum_probs=194.9
Q ss_pred chhhhhhccccchHHHHHHHhh-----hh-hhhccccccccchhh----hhhhh-hHHHhhhhhhHHHHhhhCCeEEEee
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KL-FTQAGDKGVKLNLET----MMGTK-SAAVKALTGGIAHLFKSNKVTQLNG 862 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l-~e~~~~~g~~~~~~~----~~~~~-~~~~~~l~~~~~~~l~~~gV~~~~g 862 (1074)
+++|+||||||+|+++|..|++ ++ +|+ +..|+.+.... ++... .....++..++...+.+.|++++.+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV 82 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE
Confidence 4459999999999999999998 67 888 55566543221 11111 0112456667788888899999999
Q ss_pred eEEEe-cC--CeEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCCC-cceechhh---HhcchH------------
Q psy14927 863 HGKIT-GP--NTVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVDE-ETIVSSTG---ALSLKK------------ 921 (1074)
Q Consensus 863 ~v~~i-d~--~~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~-~~v~t~~~---~~~~~~------------ 921 (1074)
+|+.+ +. ..+.+.+..+. ++.||+||||||+.|. .+|+..... ..+.+... .....+
T Consensus 83 ~v~~i~~~~~~~~~v~~~~~~--~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~ 160 (315)
T 3r9u_A 83 GVEQILKNSDGSFTIKLEGGK--TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTAL 160 (315)
T ss_dssp CEEEEEECTTSCEEEEETTSC--EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECCBHHHH
T ss_pred EEEEEecCCCCcEEEEEecCC--EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeecccccccCcCEEEEECCCHHHH
Confidence 88888 44 45664344443 8999999999999763 344443211 22222221 111111
Q ss_pred --hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCe-EEEEEeeccCCCCceEEE
Q psy14927 922 --GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDN-ITVTIENVKDPTKKEELS 998 (1074)
Q Consensus 922 --A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~~g~~~~i~ 998 (1074)
|..+.+.|.+|+++++.+.+. .++. .+.+.+++.||++++++.+.++..+++. ..+.+.. . +|+..+++
T Consensus 161 e~a~~l~~~g~~v~~~~~~~~~~---~~~~---~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~-~-~g~~~~~~ 232 (315)
T 3r9u_A 161 EEALYLANICSKIYLIHRRDEFR---AAPS---TVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKL-K-DGSIRDLN 232 (315)
T ss_dssp HHHHHHHTTSSEEEEECSSSSCB---SCHH---HHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEEC-T-TSCEEEEC
T ss_pred HHHHHHHhhCCEEEEEEeCCCCC---CCHH---HHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEc-C-CCCeEEee
Confidence 778888999999999988774 2333 3445567899999999999999887644 3455552 1 35556899
Q ss_pred cCEEEEccCCcccCCccCc-cccC-cccCCCCCeeeCCCCCCCCCCEEEecccCC-CCCcHHHHHHHHHHHHHHhh
Q psy14927 999 CDALLVCVGRRPYTHNLGL-EEIG-IEKDEKGRVPVNSRFQTVIPNIFAIGDCIH-GPMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 999 ~D~vi~a~G~~p~~~~l~l-~~~g-l~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~-~~~~~~~A~~~G~~aA~~I~ 1071 (1074)
+|.||+++|++|++.++.. +.+| ++++++|+|.||++++|++|||||+|||++ .|+.+..|+.+|+.||.+|.
T Consensus 233 ~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~ 308 (315)
T 3r9u_A 233 VPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAM 308 (315)
T ss_dssp CSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred cCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHH
Confidence 9999999999999998542 3365 899999999999999999999999999986 57789999999999999986
No 51
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.94 E-value=8.7e-27 Score=275.97 Aligned_cols=266 Identities=20% Similarity=0.268 Sum_probs=196.6
Q ss_pred hhhhhccccchHHHHHHHhh-------hhhhhcccccccc-chhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEE
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVKL-NLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKI 866 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~~-~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~ 866 (1074)
+||||||||+|+++|..|++ +++|+.+..+... .+...........+.+.....+.+.+.||+++.+ .++.
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 81 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEITA 81 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEEE
Confidence 48999999999999999987 5777776554221 1111111111112344445566777889999887 5777
Q ss_pred ecCC--eEEEEe-CCCCeeEEEcCeEEEccCCCCC--CCCCCCCCCcceech---hhHhcc--------hH---------
Q psy14927 867 TGPN--TVTVIK-SDGSTEEVKTKNILIATGSEVT--PFPGIEVDEETIVSS---TGALSL--------KK--------- 921 (1074)
Q Consensus 867 id~~--~~~v~~-~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~~v~t~---~~~~~~--------~~--------- 921 (1074)
++.. .+.+.. .+|+..++.||+||||||++|. ++||.. ...++++ ++...+ ..
T Consensus 82 i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~--~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~ 159 (447)
T 1nhp_A 82 IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKD--LDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGY 159 (447)
T ss_dssp EETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTT--SBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSH
T ss_pred EeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCC--CCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCH
Confidence 7654 444433 3463346999999999999874 344442 2345543 332221 11
Q ss_pred -----hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceE
Q psy14927 922 -----GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEE 996 (1074)
Q Consensus 922 -----A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~ 996 (1074)
|..+++.|.+||++++.+.+++..+++++.+.+.+.+++.||++++++.|.++..++....+.+ + +.+
T Consensus 160 ~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~------~~~ 232 (447)
T 1nhp_A 160 IGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVT-D------KNA 232 (447)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-S------SCE
T ss_pred HHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-C------CCE
Confidence 7788899999999999999883368999999999999999999999999999987532223443 2 247
Q ss_pred EEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCC----------CCcHHHHHHHHHHH
Q psy14927 997 LSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG----------PMLAHKAEDEGIVC 1066 (1074)
Q Consensus 997 i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~----------~~~~~~A~~~G~~a 1066 (1074)
+++|.||+|+|++|++++ ++.. ++++.+|+|.||++++|+.|+|||+|||+.. ++++..|..||+.+
T Consensus 233 i~~d~vi~a~G~~p~~~~--~~~~-~~~~~~G~i~Vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~a 309 (447)
T 1nhp_A 233 YDADLVVVAVGVRPNTAW--LKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFA 309 (447)
T ss_dssp EECSEEEECSCEEESCGG--GTTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHH
T ss_pred EECCEEEECcCCCCChHH--HHhh-hhhcCCCcEEECccccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHH
Confidence 999999999999999987 4556 7888899999999999999999999999962 35799999999999
Q ss_pred HHHhhCC
Q psy14927 1067 VEGIAGD 1073 (1074)
Q Consensus 1067 A~~I~~~ 1073 (1074)
|.||++.
T Consensus 310 a~~i~g~ 316 (447)
T 1nhp_A 310 VKNLEEP 316 (447)
T ss_dssp HHTSSSC
T ss_pred HHhhcCC
Confidence 9999874
No 52
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.94 E-value=1.1e-26 Score=263.19 Aligned_cols=265 Identities=18% Similarity=0.186 Sum_probs=191.8
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchh----hhhhhhh-HHHhhhhhhHHHHhhhCCeEEEeee
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLE----TMMGTKS-AAVKALTGGIAHLFKSNKVTQLNGH 863 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~----~~~~~~~-~~~~~l~~~~~~~l~~~gV~~~~g~ 863 (1074)
+.+|+||||||+|+++|..|++ +++|+. ..|+.+.+. ..+.... .....+...+.+.+.+.|++++.++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~ 86 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEMDE 86 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEeee
Confidence 4569999999999999999998 788887 455544321 1111100 0113455556777888899999988
Q ss_pred EEEecCC---e--EEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCCC-cceech---hhHhcchH-----------
Q psy14927 864 GKITGPN---T--VTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVDE-ETIVSS---TGALSLKK----------- 921 (1074)
Q Consensus 864 v~~id~~---~--~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~-~~v~t~---~~~~~~~~----------- 921 (1074)
|+.++.. . +.|.+.+| .++.||+||+|||+.|. ++|+..... ..+.+. +......+
T Consensus 87 v~~i~~~~~~~~~~~v~~~~g--~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g 164 (325)
T 2q7v_A 87 VQGVQHDATSHPYPFTVRGYN--GEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAA 164 (325)
T ss_dssp EEEEEECTTSSSCCEEEEESS--CEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHH
T ss_pred EEEEEeccCCCceEEEEECCC--CEEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccCCHHHcCCCEEEEECCCHHH
Confidence 8887654 2 56666777 58999999999999863 344432111 122221 22211111
Q ss_pred ---hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHH-HhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEE
Q psy14927 922 ---GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRIL-GKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEEL 997 (1074)
Q Consensus 922 ---A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l-~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i 997 (1074)
|..|.+.|.+||++++.+.+. .++.+ .+.+ ++.||+++++++++++.+++....|.+.+.. +|+..++
T Consensus 165 ~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~~----~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~-~g~~~~i 236 (325)
T 2q7v_A 165 VEEGMFLTKFADEVTVIHRRDTLR---ANKVA----QARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLK-TGEVSEL 236 (325)
T ss_dssp HHHHHHHTTTCSEEEEECSSSSCC---SCHHH----HHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETT-TCCEEEE
T ss_pred HHHHHHHHhcCCEEEEEeCCCcCC---cchHH----HHHHHhcCCceEecCCceEEEccCCcEEEEEEEECC-CCcEEEE
Confidence 778888899999999988765 23332 3334 4569999999999999985443456666422 3555689
Q ss_pred EcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHhhC
Q psy14927 998 SCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG-PMLAHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 998 ~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~-~~~~~~A~~~G~~aA~~I~~ 1072 (1074)
++|.||+|+|++|++++ +... ++++++|+|.||++++|+.|||||+|||+.. ++++..|..+|+.||.+|++
T Consensus 237 ~~D~vi~a~G~~p~~~~--l~~~-~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 237 ATDGVFIFIGHVPNTAF--VKDT-VSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp ECSEEEECSCEEESCGG--GTTT-SCBCTTSCBCCBTTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred EcCEEEEccCCCCChHH--Hhhh-cccCCCccEecCCCCccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987 4455 7788899999999999999999999999986 67899999999999999873
No 53
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.94 E-value=6.1e-27 Score=286.99 Aligned_cols=267 Identities=19% Similarity=0.254 Sum_probs=203.3
Q ss_pred chhhhhhccccchHHHHHHHhh-------hhhhhcccccccc-chhhhhhhhh-HHHhhhhhhHHHHhhhCCeEEEee-e
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVKL-NLETMMGTKS-AAVKALTGGIAHLFKSNKVTQLNG-H 863 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~~-~~~~~~~~~~-~~~~~l~~~~~~~l~~~gV~~~~g-~ 863 (1074)
+++||||||||||++||..|++ +++|+.+..+... .++....... .....+...+..+..+.|++++.+ +
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 115 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSE 115 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSEE
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECCE
Confidence 4569999999999999999998 6888877654321 1121111111 111223445666677889999887 6
Q ss_pred EEEecCCeEEEEe---CCCCeeEEEcCeEEEccCCCCC--CCCCCCCCCcceechhhHhcch-----------H------
Q psy14927 864 GKITGPNTVTVIK---SDGSTEEVKTKNILIATGSEVT--PFPGIEVDEETIVSSTGALSLK-----------K------ 921 (1074)
Q Consensus 864 v~~id~~~~~v~~---~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~~v~t~~~~~~~~-----------~------ 921 (1074)
|+.++.....+.+ .+|...++.||+||||||++|. ++||+. +...+++..++.... +
T Consensus 116 V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~-~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViG 194 (588)
T 3ics_A 116 VVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIE-EAKALFTLRNVPDTDRIKAYIDEKKPRHATVIG 194 (588)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTT-TCTTEEECSSHHHHHHHHHHHHHHCCSEEEEEC
T ss_pred EEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCCCCCcc-cCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEEC
Confidence 8888765444443 3564457999999999999873 344441 123444433222110 1
Q ss_pred --------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCC
Q psy14927 922 --------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTK 993 (1074)
Q Consensus 922 --------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~ 993 (1074)
|..+.+.|.+||++++.+.++ +.+++++.+.+.+.+++.||++++++.|.+++.++++ |.+.+
T Consensus 195 gG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--v~~~~------ 265 (588)
T 3ics_A 195 GGFIGVEMVENLRERGIEVTLVEMANQVM-PPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGAV--VRLKS------ 265 (588)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSSSSC-TTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTE--EEETT------
T ss_pred CCHHHHHHHHHHHhCCCeEEEEecCCccc-ccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCCE--EEECC------
Confidence 778889999999999999998 6799999999999999999999999999999876543 44443
Q ss_pred ceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCC-------C---CCcHHHHHHHH
Q psy14927 994 KEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIH-------G---PMLAHKAEDEG 1063 (1074)
Q Consensus 994 ~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~-------~---~~~~~~A~~~G 1063 (1074)
++++++|.||+|+|++|++++ ++..|++++++|+|.||++++|++|||||+|||+. . +++++.|..+|
T Consensus 266 g~~i~~D~Vi~a~G~~p~~~~--l~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g 343 (588)
T 3ics_A 266 GSVIQTDMLILAIGVQPESSL--AKGAGLALGVRGTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQG 343 (588)
T ss_dssp SCEEECSEEEECSCEEECCHH--HHHTTCCBCGGGCBCCCTTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHH
T ss_pred CCEEEcCEEEEccCCCCChHH--HHhcCceEcCCCCEEECCccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHH
Confidence 358999999999999999987 67889999999999999999999999999999984 2 45899999999
Q ss_pred HHHHHHhhC
Q psy14927 1064 IVCVEGIAG 1072 (1074)
Q Consensus 1064 ~~aA~~I~~ 1072 (1074)
+++|.||+|
T Consensus 344 ~~aa~~i~g 352 (588)
T 3ics_A 344 RMLADIIHG 352 (588)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcC
Confidence 999999998
No 54
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.94 E-value=1.3e-26 Score=276.90 Aligned_cols=267 Identities=19% Similarity=0.240 Sum_probs=198.4
Q ss_pred hhhhhhccccchHHHHHHHhh-------hhhhhcccccccc-chhhhhhhhhHHHhhhhhhHHHHh-hhCCeEEEee-eE
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVKL-NLETMMGTKSAAVKALTGGIAHLF-KSNKVTQLNG-HG 864 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~~-~~~~~~~~~~~~~~~l~~~~~~~l-~~~gV~~~~g-~v 864 (1074)
.+||||||||+|+++|..|++ +++|+.+..+... .++............+.....+.+ +..||+++.+ .|
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 459999999999999999987 5777766543221 122211111111233433344445 4559999997 67
Q ss_pred EEecCC--eEEEEe-CCCCeeEEEcCeEEEccCCCCC--CCCCCCCCCccee---chhhHhcch--------H-------
Q psy14927 865 KITGPN--TVTVIK-SDGSTEEVKTKNILIATGSEVT--PFPGIEVDEETIV---SSTGALSLK--------K------- 921 (1074)
Q Consensus 865 ~~id~~--~~~v~~-~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~~v~---t~~~~~~~~--------~------- 921 (1074)
+.++.. .+.+.. .+|+..++.||+||||||++|. ++||.. ...++ +++++..+. +
T Consensus 117 ~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~--~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGg 194 (480)
T 3cgb_A 117 TKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRD--LQGVHLLKTIPDAERILKTLETNKVEDVTIIGG 194 (480)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCBTTT--SBTEECCSSHHHHHHHHHHHHSSCCCEEEEECC
T ss_pred EEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCCCCCcc--CCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECC
Confidence 888754 444443 3463347999999999999874 334432 23344 345543221 1
Q ss_pred -------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCc
Q psy14927 922 -------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKK 994 (1074)
Q Consensus 922 -------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~ 994 (1074)
|..+.+.|.+||++++.+.++ +.+++++.+.+.+.+++.||++++++.|+++..+++...+.+ + +
T Consensus 195 G~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~-~------~ 266 (480)
T 3cgb_A 195 GAIGLEMAETFVELGKKVRMIERNDHIG-TIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVET-D------K 266 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCGGGTT-SSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEE-T------T
T ss_pred CHHHHHHHHHHHhcCCeEEEEEeCCchh-hcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEE-C------C
Confidence 778888999999999999988 689999999999999999999999999999987532223332 2 2
Q ss_pred eEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCC----------CCcHHHHHHHHH
Q psy14927 995 EELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG----------PMLAHKAEDEGI 1064 (1074)
Q Consensus 995 ~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~----------~~~~~~A~~~G~ 1064 (1074)
.++++|.||+|+|++|++++ ++..|++++++|+|.||++++|+.|+|||+|||+.. ++++..|..||+
T Consensus 267 ~~i~~D~vi~a~G~~p~~~~--l~~~g~~~~~~G~I~Vd~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~ 344 (480)
T 3cgb_A 267 GTYKADLVLVSVGVKPNTDF--LEGTNIRTNHKGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGR 344 (480)
T ss_dssp EEEECSEEEECSCEEESCGG--GTTSCCCBCTTSCBCCCTTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHH
T ss_pred CEEEcCEEEECcCCCcChHH--HHhCCcccCCCCCEEECCCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHH
Confidence 47999999999999999987 678899999999999999999999999999999852 257899999999
Q ss_pred HHHHHhhCC
Q psy14927 1065 VCVEGIAGD 1073 (1074)
Q Consensus 1065 ~aA~~I~~~ 1073 (1074)
.+|.||++.
T Consensus 345 ~aa~~i~g~ 353 (480)
T 3cgb_A 345 LAGLNMLDK 353 (480)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHhcCC
Confidence 999999874
No 55
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.94 E-value=2.1e-26 Score=259.23 Aligned_cols=264 Identities=18% Similarity=0.259 Sum_probs=182.3
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccccc-hh---hhhhhhhHHHhhhhhhHHHHhhhCCeEEEeee-E
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLN-LE---TMMGTKSAAVKALTGGIAHLFKSNKVTQLNGH-G 864 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~-~~---~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~-v 864 (1074)
.+|+||||||||++||+++++ +++|+. .+|+... .. .++........++.........+.++.+..+. +
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIK 85 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeee
Confidence 359999999999999999999 678764 3444332 11 11221111113344445566667777777773 3
Q ss_pred EEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCCCc-ceec---hhhHhcchH--------------hhH
Q psy14927 865 KITGPNTVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVDEE-TIVS---STGALSLKK--------------GSV 924 (1074)
Q Consensus 865 ~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~-~v~t---~~~~~~~~~--------------A~~ 924 (1074)
...+.....+...++ .+++||+||||||++|. ++||...... .+.+ .+......+ |..
T Consensus 86 ~~~~~~~~~~~~~~~--~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~ 163 (312)
T 4gcm_A 86 SVEDKGEYKVINFGN--KELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTF 163 (312)
T ss_dssp EEEECSSCEEEECSS--CEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHH
T ss_pred eeeeeecceeeccCC--eEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCccccCCCEEEEECCCHHHHHHHHH
Confidence 444444444555566 68999999999999874 4555432221 2222 122211111 888
Q ss_pred HhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEE-EEEeeccCCCCceEEEcCEEE
Q psy14927 925 WGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNIT-VTIENVKDPTKKEELSCDALL 1003 (1074)
Q Consensus 925 l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~-v~~~~~~~~g~~~~i~~D~vi 1003 (1074)
|+++|.+||+++++++++ +.. ......++..++.+.....+..+...+.... ....... ++++..+++|.|+
T Consensus 164 l~~~g~~Vtlv~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~v~ 236 (312)
T 4gcm_A 164 LTKFADKVTIVHRRDELR-AQR-----ILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTK-DGSEETHEADGVF 236 (312)
T ss_dssp HTTTCSEEEEECSSSSCC-SCH-----HHHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETT-TCCEEEEECSEEE
T ss_pred HHhcCCEEEEEecccccC-cch-----hHHHHHHHhcCcceeeecceeeeeccccccccceeeeec-CCceeEEeeeeEE
Confidence 999999999999999887 321 1233567788899988887777766544322 2222222 4567889999999
Q ss_pred EccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHhh
Q psy14927 1004 VCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG-PMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1004 ~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~-~~~~~~A~~~G~~aA~~I~ 1071 (1074)
+++|.+|++.+ +...++. +++|+|.||+++|||+|||||+|||++. +++++.|+.+|+.||.||.
T Consensus 237 ~~~g~~~~~~~--~~~~g~~-~~~G~I~vd~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~ 302 (312)
T 4gcm_A 237 IYIGMKPLTAP--FKDLGIT-NDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAA 302 (312)
T ss_dssp ECSCEEESCGG--GGGGTCB-CTTSCBCCCTTSBCSSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHH
T ss_pred eecCCCcCchh--HHhccee-cCCCeEeeCCCCccCCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHH
Confidence 99999999987 5666764 5689999999999999999999999974 5689999999999999986
No 56
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.94 E-value=5.4e-27 Score=266.64 Aligned_cols=266 Identities=19% Similarity=0.208 Sum_probs=195.6
Q ss_pred cchhhhhhccccchHHHHHHHhh-----hhhhhc----cccccccchhh----hhhhhh-HHHhhhhhhHHHHhhhCCeE
Q psy14927 793 QRQVVLNTLGNCAAVQANYHLAT-----KLFTQA----GDKGVKLNLET----MMGTKS-AAVKALTGGIAHLFKSNKVT 858 (1074)
Q Consensus 793 ~k~~VviiGgG~AGl~aA~~la~-----~l~e~~----~~~g~~~~~~~----~~~~~~-~~~~~l~~~~~~~l~~~gV~ 858 (1074)
++++|+||||||+|+++|+.|++ +++|+. ...|+.+.... ++.... .....+...+...+.+.|++
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 100 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTE 100 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCE
Confidence 35679999999999999999999 788884 36666554321 111110 01245666678888889999
Q ss_pred EEeeeEEEecCC--eEEEEeC---CCCeeEEEcCeEEEccCCCCC--CCCCCCCC-CcceechhhHhcc------hH---
Q psy14927 859 QLNGHGKITGPN--TVTVIKS---DGSTEEVKTKNILIATGSEVT--PFPGIEVD-EETIVSSTGALSL------KK--- 921 (1074)
Q Consensus 859 ~~~g~v~~id~~--~~~v~~~---~G~~~~i~~d~lIIATG~~p~--~ipgi~~~-~~~v~t~~~~~~~------~~--- 921 (1074)
++.++|+.++.. .+.+.+. ++ .++.||+||+|||+.|. .+|+.... ...+.+....... ..
T Consensus 101 i~~~~v~~i~~~~~~~~v~~~~~~~~--~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 178 (338)
T 3itj_A 101 IITETVSKVDLSSKPFKLWTEFNEDA--EPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAV 178 (338)
T ss_dssp EECSCEEEEECSSSSEEEEETTCSSS--CCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEE
T ss_pred EEEeEEEEEEEcCCEEEEEEEecCCC--cEEEeCEEEECcCCCcCCCCCCCchhccCccEEEchhcccchhhcCCCEEEE
Confidence 999998888754 4555552 44 57999999999999863 34442110 1122222211111 11
Q ss_pred ----------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhC-CCEEEeCceEEEEEecCCe-EEEEEeecc
Q psy14927 922 ----------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQ-GMQFKLGTKVTGASKSGDN-ITVTIENVK 989 (1074)
Q Consensus 922 ----------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~-gV~i~~~~~v~~i~~~~~~-~~v~~~~~~ 989 (1074)
|..|.+.|.+|+++++.+.+. + ...+.+.+.+. ||++++++.|.++..+++. ..|++.+..
T Consensus 179 vG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~-~------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~ 251 (338)
T 3itj_A 179 IGGGDSACEEAQFLTKYGSKVFMLVRKDHLR-A------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTK 251 (338)
T ss_dssp ECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-S------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETT
T ss_pred ECCCHHHHHHHHHHHhcCCEEEEEEcCCccC-C------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECC
Confidence 778888999999999998876 2 23445566554 9999999999999987654 347776633
Q ss_pred CCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeee-CCCCCCCCCCEEEecccCCC-CCcHHHHHHHHHHHH
Q psy14927 990 DPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPV-NSRFQTVIPNIFAIGDCIHG-PMLAHKAEDEGIVCV 1067 (1074)
Q Consensus 990 ~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~V-d~~~~ts~~~IyAiGD~~~~-~~~~~~A~~~G~~aA 1067 (1074)
+|++.++++|.||+|+|++|++.++ .. +++++++|+|.| |++++|+.|||||+|||++. |+.+..|+.+|..||
T Consensus 252 -~g~~~~i~~D~vi~a~G~~p~~~~~--~~-~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa 327 (338)
T 3itj_A 252 -KNEETDLPVSGLFYAIGHTPATKIV--AG-QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAA 327 (338)
T ss_dssp -TTEEEEEECSEEEECSCEEECCGGG--BT-TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHH
T ss_pred -CCceEEEEeCEEEEEeCCCCChhHh--hC-ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhHHHH
Confidence 4556789999999999999999874 34 899999999985 78899999999999999984 678999999999999
Q ss_pred HHhh
Q psy14927 1068 EGIA 1071 (1074)
Q Consensus 1068 ~~I~ 1071 (1074)
.+|.
T Consensus 328 ~~i~ 331 (338)
T 3itj_A 328 LDAE 331 (338)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9986
No 57
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.94 E-value=2.1e-26 Score=258.85 Aligned_cols=262 Identities=19% Similarity=0.247 Sum_probs=190.8
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhccccccccch----hhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEE
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNL----ETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGK 865 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~ 865 (1074)
+|+||||||+|+++|..|++ +++++ ..|+.+.. ..++.........+...+...+.+.|++++.+ +|+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~ 80 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSAS 80 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEE
Confidence 49999999999999999998 55653 33443321 11111111112345556777788889999999 799
Q ss_pred EecCC-----eEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCC-CcceechhhHh----cchH------------
Q psy14927 866 ITGPN-----TVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVD-EETIVSSTGAL----SLKK------------ 921 (1074)
Q Consensus 866 ~id~~-----~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~-~~~v~t~~~~~----~~~~------------ 921 (1074)
.+++. .+.|.+++| .++.||+||+|||++|. ++||.... ...+.+..... ..+.
T Consensus 81 ~i~~~~~~~~~~~v~~~~g--~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e 158 (310)
T 1fl2_A 81 KLIPAAVEGGLHQIETASG--AVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVE 158 (310)
T ss_dssp EEECCSSTTCCEEEEETTS--CEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHH
T ss_pred EEEecccCCceEEEEECCC--CEEEeCEEEECcCCCcCCCCCCChhhcccceeEEeccCcHhhcCCCEEEEECCCHHHHH
Confidence 88653 577888887 67999999999999863 34444211 12233322211 1111
Q ss_pred -hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHh-CCCEEEeCceEEEEEecCCeE-EEEEeeccCCCCceEEE
Q psy14927 922 -GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGK-QGMQFKLGTKVTGASKSGDNI-TVTIENVKDPTKKEELS 998 (1074)
Q Consensus 922 -A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~-~gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~~~~i~ 998 (1074)
|..|.+.|.+||++++.+.+. +++ .+.+.+.+ .||++++++.+.++.++++.+ .+.+.+.. +|+..+++
T Consensus 159 ~A~~l~~~g~~Vtlv~~~~~~~---~~~----~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~-~g~~~~i~ 230 (310)
T 1fl2_A 159 AAIDLAGIVEHVTLLEFAPEMK---ADQ----VLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRV-SGDIHNIE 230 (310)
T ss_dssp HHHHHHTTBSEEEEECSSSSCC---SCH----HHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETT-TCCEEEEE
T ss_pred HHHHHHHhCCEEEEEEeCcccC---ccH----HHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECC-CCcEEEEE
Confidence 777888899999999988764 333 34556666 699999999999998765443 56666522 35556899
Q ss_pred cCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCC-CcHHHHHHHHHHHHHHhhC
Q psy14927 999 CDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGP-MLAHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 999 ~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~-~~~~~A~~~G~~aA~~I~~ 1072 (1074)
+|.||+|+|++|+++++ .. .++++++|+|.||++++|+.|+|||+|||+..| +.+..|+.+|+.||.+|..
T Consensus 231 ~D~vi~a~G~~p~~~~l--~~-~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 231 LAGIFVQIGLLPNTNWL--EG-AVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFD 302 (310)
T ss_dssp CSEEEECSCEEESCGGG--TT-TSCBCTTSCBCCCTTCBCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEeeCCccCchHH--hc-cccccCCCcEEcCCCCccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHH
Confidence 99999999999999874 33 378888999999999999999999999999875 5789999999999999863
No 58
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.94 E-value=5.8e-27 Score=265.66 Aligned_cols=264 Identities=15% Similarity=0.127 Sum_probs=198.7
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchh-------hhhhhhhHHHhhhhhhHHHHhhhCCeEEEe
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLE-------TMMGTKSAAVKALTGGIAHLFKSNKVTQLN 861 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~-------~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~ 861 (1074)
.++|+||||||+|+++|+.|++ +++|+.+..|+.+... ..+........++...+...+.+.|++++.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICL 86 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEEC
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEc
Confidence 3469999999999999999998 7999988887765211 011111111255666778888888999998
Q ss_pred e-eEEEecCC---eEEEEeCCCCeeEEEcCeEEEccCC---CCC--CCCCCCC-CCcceec-hhhHhcch--H-------
Q psy14927 862 G-HGKITGPN---TVTVIKSDGSTEEVKTKNILIATGS---EVT--PFPGIEV-DEETIVS-STGALSLK--K------- 921 (1074)
Q Consensus 862 g-~v~~id~~---~~~v~~~~G~~~~i~~d~lIIATG~---~p~--~ipgi~~-~~~~v~t-~~~~~~~~--~------- 921 (1074)
+ +|+.++.. .+.|.+.+| ++.||+||+|||+ .|. ++||... ....+.+ ..+..... .
T Consensus 87 ~~~v~~i~~~~~~~~~v~~~~g---~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~v~vvG~g 163 (332)
T 3lzw_A 87 EQAVESVEKQADGVFKLVTNEE---THYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHYFVDDLQKFAGRRVAILGGG 163 (332)
T ss_dssp SCCEEEEEECTTSCEEEEESSE---EEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEESSCSCGGGGBTCEEEEECSS
T ss_pred cCEEEEEEECCCCcEEEEECCC---EEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEEecCCHHHcCCCEEEEECCC
Confidence 6 68877653 467888877 4999999999999 553 3444322 1111221 11111111 1
Q ss_pred ------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCce
Q psy14927 922 ------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKE 995 (1074)
Q Consensus 922 ------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~ 995 (1074)
|..+.+.|.+|+++++.+.+. ..++ ..+.|++.||+++.++.+.++..+++...|++.+.. +|++.
T Consensus 164 ~~~~e~a~~l~~~~~~v~~~~~~~~~~--~~~~-----~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~-~g~~~ 235 (332)
T 3lzw_A 164 DSAVDWALMLEPIAKEVSIIHRRDKFR--AHEH-----SVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVK-GDRKE 235 (332)
T ss_dssp HHHHHHHHHHTTTBSEEEEECSSSSCS--SCHH-----HHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETT-SCCEE
T ss_pred HhHHHHHHHHHhhCCeEEEEEecCcCC--ccHH-----HHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecC-CCceE
Confidence 777888899999999998875 2222 235578999999999999999987666667777643 46678
Q ss_pred EEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccC---CCCCcHHHHHHHHHHHHHHhh
Q psy14927 996 ELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCI---HGPMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 996 ~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~---~~~~~~~~A~~~G~~aA~~I~ 1071 (1074)
++++|.||+++|++|++++ +..+++++ ++|+|.||++++|++|||||+|||+ +.|+++..|+.+|..||.+|+
T Consensus 236 ~~~~D~vv~a~G~~p~~~~--~~~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 311 (332)
T 3lzw_A 236 ILEIDDLIVNYGFVSSLGP--IKNWGLDI-EKNSIVVKSTMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAK 311 (332)
T ss_dssp EEECSEEEECCCEECCCGG--GGGSSCCE-ETTEEECCTTSBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred EEECCEEEEeeccCCCchH--HhhcCccc-cCCeEEeCCCCceecCCEEEccceecCCCCcceEeeehhhHHHHHHHHH
Confidence 8999999999999999987 67888888 6799999999999999999999998 467789999999999999986
No 59
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.94 E-value=7.4e-27 Score=262.09 Aligned_cols=257 Identities=12% Similarity=0.101 Sum_probs=180.8
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhcccccccc--chhhhhhhhhHHHhhhhhhHHHHhhhC-CeEEEeeeEE
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL--NLETMMGTKSAAVKALTGGIAHLFKSN-KVTQLNGHGK 865 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~--~~~~~~~~~~~~~~~l~~~~~~~l~~~-gV~~~~g~v~ 865 (1074)
+.+|+||||||||++||++++| +++|+.. .|+.+ .++.++........++.....+++.++ ++.+..++++
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVV 84 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEE
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEE
Confidence 3459999999999999999998 6788754 33332 122222111111233333344444444 6778777666
Q ss_pred Ee---cCCeEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCC-CCcceechhhHhcc--hH----------------
Q psy14927 866 IT---GPNTVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEV-DEETIVSSTGALSL--KK---------------- 921 (1074)
Q Consensus 866 ~i---d~~~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~-~~~~v~t~~~~~~~--~~---------------- 921 (1074)
.+ +...+++.+.+| .++.||+||||||++|. ++||... ....++++...... ..
T Consensus 85 ~~~~~~~~~~~v~~~~g--~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~ 162 (304)
T 4fk1_A 85 MITKQSTGLFEIVTKDH--TKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHM 162 (304)
T ss_dssp EEEECTTSCEEEEETTC--CEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHH
T ss_pred EeeecCCCcEEEEECCC--CEEEeCEEEEccCCccccccccCccccccceeeeccccchhHhcCCceeeecCCCchhhhH
Confidence 54 345678888888 78999999999999873 3444221 11223333222211 11
Q ss_pred hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCe-EEEEEeeccCCCCceEEEcC
Q psy14927 922 GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDN-ITVTIENVKDPTKKEELSCD 1000 (1074)
Q Consensus 922 A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~~g~~~~i~~D 1000 (1074)
|..+.+.|.+||++.+++.+. ..+.+.|++.|++++.++ +..+..+++. ..|++.+ ++++++|
T Consensus 163 a~~~~~~~~~v~i~~~~~~~~---------~~~~~~l~~~g~~~~~~~-v~~~~~~~~~~~~v~~~~------g~~i~~~ 226 (304)
T 4fk1_A 163 TKLVYNWSTDLVIATNGNELS---------QTIMDELSNKNIPVITES-IRTLQGEGGYLKKVEFHS------GLRIERA 226 (304)
T ss_dssp HHHHTTTCSCEEEECSSCCCC---------HHHHHHHHTTTCCEECSC-EEEEESGGGCCCEEEETT------SCEECCC
T ss_pred HHHHHhCCceEEEEeccccch---------hhhhhhhhccceeEeeee-EEEeecCCCeeeeeeccc------cceeeec
Confidence 667778899999998776543 335577889999999764 7777765443 3455544 5689999
Q ss_pred EEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHhh
Q psy14927 1001 ALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG-PMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1001 ~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~-~~~~~~A~~~G~~aA~~I~ 1071 (1074)
.+++++|.+|++.+ +..+|++++++|+|.||+++|||+|||||+|||++. +.++..|+.+|+.||.+|.
T Consensus 227 ~~vi~~g~~~~~~~--~~~~g~~~~~~G~I~vd~~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 227 GGFIVPTFFRPNQF--IEQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAIN 296 (304)
T ss_dssp EEEECCEEECSSCH--HHHTTCCCCTTSSSCSSTTCBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred ceeeeeccccCChh--hhhcCeEECCCCCEEECcCCccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHH
Confidence 99999888887776 678899999999999999999999999999999974 5578999999999999884
No 60
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.94 E-value=1.8e-26 Score=259.76 Aligned_cols=262 Identities=16% Similarity=0.176 Sum_probs=186.7
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhcccc----ccccch-------hhhhhhhhHHHhhhhhhHHHHhhhCCeE
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDK----GVKLNL-------ETMMGTKSAAVKALTGGIAHLFKSNKVT 858 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~----g~~~~~-------~~~~~~~~~~~~~l~~~~~~~l~~~gV~ 858 (1074)
.+|+||||||||++||+++++ +++|+.... ++.+.. +.++... ...++...+...+.+.+++
T Consensus 5 yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i--~~~~l~~~~~~~~~~~~~~ 82 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGI--DGNELMMNMRTQSEKYGTT 82 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCE--EHHHHHHHHHHHHHHTTCE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccC--CHHHHHHHHHHHHhhcCcE
Confidence 359999999999999999998 678875432 222211 1111111 1245556677788889999
Q ss_pred EEeeeEEEec--CCeEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCCCc-ceechhhHhcc------hH------
Q psy14927 859 QLNGHGKITG--PNTVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVDEE-TIVSSTGALSL------KK------ 921 (1074)
Q Consensus 859 ~~~g~v~~id--~~~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~-~v~t~~~~~~~------~~------ 921 (1074)
+..+++.... ...+.+.+.++ .++.||+||||||++|. ++||...... .+......... +.
T Consensus 83 ~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGg 160 (314)
T 4a5l_A 83 IITETIDHVDFSTQPFKLFTEEG--KEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGG 160 (314)
T ss_dssp EECCCEEEEECSSSSEEEEETTC--CEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECS
T ss_pred EEEeEEEEeecCCCceEEEECCC--eEEEEeEEEEcccccccccCCCccccccccceeeehhhhhhhhhcCCCeEEEECC
Confidence 9988766554 34566667777 78999999999999874 4555321111 12221111111 11
Q ss_pred -------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCe-EEEEEeeccCCCC
Q psy14927 922 -------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDN-ITVTIENVKDPTK 993 (1074)
Q Consensus 922 -------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~~g~ 993 (1074)
|..|.++|.+||++++.+.... .+ ....+.....++..+....+.++...++. ..+.+.+.. .++
T Consensus 161 G~ig~e~A~~l~~~G~~Vt~v~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~ 233 (314)
T 4a5l_A 161 GDAAMEEALHLTKYGSKVIILHRRDAFRA---SK---TMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLV-SGE 233 (314)
T ss_dssp SHHHHHHHHHHTTTSSEEEEECSSSSCCS---CH---HHHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETT-TCC
T ss_pred ChHHHHHHHHHHHhCCeeeeecccccccc---cc---hhhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeecc-ccc
Confidence 8889999999999998876652 22 22345567778999999989988875433 344444433 466
Q ss_pred ceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCC-CcHHHHHHHHHHHHHHhh
Q psy14927 994 KEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGP-MLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 994 ~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~-~~~~~A~~~G~~aA~~I~ 1071 (1074)
++++++|.|++++|++||++++ ..++.++++|+| ||++++||+|||||+|||++.| +++..|+.+|+.||.+|.
T Consensus 234 ~~~i~~d~vi~a~G~~pn~~~l---~~~~~~~~~G~i-v~~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 234 YKVVPVAGLFYAIGHSPNSKFL---GGQVKTADDGYI-LTEGPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCE 308 (314)
T ss_dssp EEEEECSEEEECSCEEESCGGG---TTSSCBCTTSCB-CCBTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred ceeeccccceEecccccChhHh---cccceEcCCeeE-eCCCCccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999985 345778888877 8889999999999999999876 478999999999999874
No 61
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.94 E-value=1.2e-27 Score=279.34 Aligned_cols=263 Identities=13% Similarity=0.180 Sum_probs=196.5
Q ss_pred hhhhhhccccchHHHHHHHhh-------hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEe
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKIT 867 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~i 867 (1074)
|+||||||||||+++|.+|++ +++|+.+.+...+.+..+..+.... +.+...+.. +.+.||+|+.++|+.+
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~-~~~~~~~~~-~~~~gv~~i~~~v~~i 80 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDREL-ASLRVGYDG-LRAHGIQVVHDSALGI 80 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCG-GGGEECSHH-HHHTTCEEECSCEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCH-HHHhhCHHH-HHHCCCEEEEeEEEEE
Confidence 459999999999999999987 7888887766666555554443322 444443433 4467999999999999
Q ss_pred cCCeEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCCC----cc-eechhhHhcchH-------------------
Q psy14927 868 GPNTVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVDE----ET-IVSSTGALSLKK------------------- 921 (1074)
Q Consensus 868 d~~~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~----~~-v~t~~~~~~~~~------------------- 921 (1074)
|++...+++.+| .++.||+||||||+++. .+||+.... .+ ..+.++...+.+
T Consensus 81 d~~~~~v~~~~g--~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~ 158 (401)
T 3vrd_B 81 DPDKKLVKTAGG--AEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPP 158 (401)
T ss_dssp ETTTTEEEETTS--CEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSS
T ss_pred EccCcEEEeccc--ceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCcc
Confidence 999889999998 78999999999999863 456643211 11 112233222211
Q ss_pred --------------hhHHhhcC--CcEEEEecCCccCC-CCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEE
Q psy14927 922 --------------GSVWGRLG--AEVTAIEFMNAIGG-MGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVT 984 (1074)
Q Consensus 922 --------------A~~l~~~G--~~Vtlv~~~~~~~~-~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~ 984 (1074)
+..+++.+ .+|+++++.+.+.. +.+++.+.+.+...+++.||++++++++..++.+++...++
T Consensus 159 i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~ 238 (401)
T 3vrd_B 159 FRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVE 238 (401)
T ss_dssp CBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEE
T ss_pred EEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEE
Confidence 34444444 68999998877641 33456666666667789999999999999998876666666
Q ss_pred EeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCC-CC-CCCCCEEEecccCCC---CCcHHHH
Q psy14927 985 IENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSR-FQ-TVIPNIFAIGDCIHG---PMLAHKA 1059 (1074)
Q Consensus 985 ~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~-~~-ts~~~IyAiGD~~~~---~~~~~~A 1059 (1074)
+.+ ++++++|++++++|++|+. + +..+++ .+++|+|.||++ +| |++|||||+|||++. |++++.|
T Consensus 239 ~~~------g~~i~~D~vi~~~g~~~~~-~--~~~~gl-~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A 308 (401)
T 3vrd_B 239 TSF------GETFKAAVINLIPPQRAGK-I--AQSASL-TNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSA 308 (401)
T ss_dssp ETT------SCEEECSEEEECCCEEECH-H--HHHTTC-CCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHH
T ss_pred cCC------CcEEEeeEEEEecCcCCch-h--Hhhccc-cccCCCEEECCCcceecCCCCEEEecccccCCCCCchHHHH
Confidence 554 5689999999999999974 3 567787 478899999975 66 799999999999864 5789999
Q ss_pred HHHHHHHHHHhh
Q psy14927 1060 EDEGIVCVEGIA 1071 (1074)
Q Consensus 1060 ~~~G~~aA~~I~ 1071 (1074)
..||+++|+||+
T Consensus 309 ~~qa~v~A~ni~ 320 (401)
T 3vrd_B 309 NSQAKVAAAAVV 320 (401)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999997
No 62
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.94 E-value=4.8e-26 Score=257.18 Aligned_cols=263 Identities=19% Similarity=0.229 Sum_probs=190.7
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchh----hhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeE
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLE----TMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHG 864 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~----~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v 864 (1074)
+.+|+||||||+|+++|+.|++ +++|+. ..|+.+... ..+.........+...+.+.+.+.|++++.+++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 94 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREGVEV 94 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEETCCE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEEeeE
Confidence 3459999999999999999998 788873 444433211 111110001134445566777888999999888
Q ss_pred EEecC--CeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCC----cceec---hhhHhcchH--------------
Q psy14927 865 KITGP--NTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDE----ETIVS---STGALSLKK-------------- 921 (1074)
Q Consensus 865 ~~id~--~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~----~~v~t---~~~~~~~~~-------------- 921 (1074)
+.++. +.+.|.+ +| .++.||+||+|||+.|. .|++++.. ..+.. .+......+
T Consensus 95 ~~i~~~~~~~~v~~-~~--~~~~~~~li~AtG~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~ 170 (319)
T 3cty_A 95 RSIKKTQGGFDIET-ND--DTYHAKYVIITTGTTHK-HLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIA 170 (319)
T ss_dssp EEEEEETTEEEEEE-SS--SEEEEEEEEECCCEEEC-CCCCBTTTTTBTTTEESCHHHHGGGGBTSEEEEECCSHHHHHH
T ss_pred EEEEEeCCEEEEEE-CC--CEEEeCEEEECCCCCcc-cCCCCChHHhCCceEEEEEecchhhcCCCeEEEECCCHHHHHH
Confidence 88763 4456666 44 47999999999999863 23333322 12222 222211111
Q ss_pred hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCC-eEEEEEeeccCCCCceEEEcC
Q psy14927 922 GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGD-NITVTIENVKDPTKKEELSCD 1000 (1074)
Q Consensus 922 A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~-~~~v~~~~~~~~g~~~~i~~D 1000 (1074)
|..|.+.|.+||++++.+.+. .++ .+.+.+.+.||++++++.+.++.++++ ...+.+.+.. +|+..++++|
T Consensus 171 a~~l~~~g~~V~~i~~~~~~~---~~~----~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~-~g~~~~i~~D 242 (319)
T 3cty_A 171 AISMSEYVKNVTIIEYMPKYM---CEN----AYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRT-TGEEKLIETD 242 (319)
T ss_dssp HHHHTTTBSEEEEECSSSSCC---SCH----HHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETT-TCCEEEECCS
T ss_pred HHHHHhhCCcEEEEEcCCccC---CCH----HHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcC-CCceEEEecC
Confidence 777888899999999988765 233 345566789999999999999988654 2356665322 3545689999
Q ss_pred EEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHhh
Q psy14927 1001 ALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG-PMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1001 ~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~-~~~~~~A~~~G~~aA~~I~ 1071 (1074)
.||+|+|++|++++ +...|++++++|+|.||++++|+.|||||+|||+.. +.++..|+.+|+.||.+|.
T Consensus 243 ~vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 312 (319)
T 3cty_A 243 GVFIYVGLIPQTSF--LKDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLY 312 (319)
T ss_dssp EEEECCCEEECCGG--GTTSCCCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred EEEEeeCCccChHH--HhhccccccCCccEeCCCCCccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHH
Confidence 99999999999988 567789999999999999999999999999999987 4789999999999999986
No 63
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.94 E-value=5.7e-26 Score=255.43 Aligned_cols=263 Identities=16% Similarity=0.164 Sum_probs=189.1
Q ss_pred hhhhhccccchHHHHHHHhh------hhhhhccccccccchh----hhhhhh-hHHHhhhhhhHHHHhhhCCeEEEeeeE
Q psy14927 796 VVLNTLGNCAAVQANYHLAT------KLFTQAGDKGVKLNLE----TMMGTK-SAAVKALTGGIAHLFKSNKVTQLNGHG 864 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~------~l~e~~~~~g~~~~~~----~~~~~~-~~~~~~l~~~~~~~l~~~gV~~~~g~v 864 (1074)
+|+||||||+|+++|+.|++ +++|+. ..|+.+... ..+... .-....+...+.+.+.+.|++++.++|
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEECSCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEEEEE
Confidence 49999999999999999987 466663 344433211 111110 001134555567777888999999888
Q ss_pred EEecC--CeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCC----cceec---hhhHhcchH--------------
Q psy14927 865 KITGP--NTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDE----ETIVS---STGALSLKK-------------- 921 (1074)
Q Consensus 865 ~~id~--~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~----~~v~t---~~~~~~~~~-------------- 921 (1074)
+.++. +.+.+.+.+| .++.||+||+|||+.|. +|.+++.. ..+.+ .+......+
T Consensus 82 ~~i~~~~~~~~v~~~~g--~~~~~~~vv~AtG~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~ 158 (311)
T 2q0l_A 82 QRVSKKDSHFVILAEDG--KTFEAKSVIIATGGSPK-RTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEE 158 (311)
T ss_dssp EEEEEETTEEEEEETTS--CEEEEEEEEECCCEEEC-CCCCBTHHHHBTTTEESCHHHHGGGGTTSEEEEECCSHHHHHH
T ss_pred EEEEEcCCEEEEEEcCC--CEEECCEEEECCCCCCC-CCCCCChhhccCCcEEEeecCChhhcCCCEEEEECCCHHHHHH
Confidence 87763 4557777777 57999999999999873 23333321 12222 222211111
Q ss_pred hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHH-hCCCEEEeCceEEEEEecCCeE-EEEEeeccCCCCceEEEc
Q psy14927 922 GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILG-KQGMQFKLGTKVTGASKSGDNI-TVTIENVKDPTKKEELSC 999 (1074)
Q Consensus 922 A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~-~~gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~~~~i~~ 999 (1074)
|..|.+.|.+||++++++.+. .++. +.+.+. +.||++++++.++++.++++++ .+.+.+.. +|+..++++
T Consensus 159 A~~l~~~g~~Vtlv~~~~~~~---~~~~----~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~-~g~~~~i~~ 230 (311)
T 2q0l_A 159 AIYLANICKKVYLIHRRDGFR---CAPI----TLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTA-TNEKRELVV 230 (311)
T ss_dssp HHHHHTTSSEEEEECSSSSCC---SCHH----HHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETT-TCCEEEEEC
T ss_pred HHHHHhcCCEEEEEeeCCccC---CCHH----HHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecC-CCceEEEec
Confidence 778888899999999988764 3343 334454 5799999999999998864443 56666322 355568999
Q ss_pred CEEEEccCCcccCCccCcccc----CcccCCCCCeeeCCCCCCCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHhhC
Q psy14927 1000 DALLVCVGRRPYTHNLGLEEI----GIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG-PMLAHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 1000 D~vi~a~G~~p~~~~l~l~~~----gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~-~~~~~~A~~~G~~aA~~I~~ 1072 (1074)
|.||+++|++|+++++ ... +++++++|+|.||++++|++|||||+|||+.. |+++..|+.+|+.||.||..
T Consensus 231 D~vi~a~G~~p~~~~l--~~~g~~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 231 PGFFIFVGYDVNNAVL--KQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVIS 306 (311)
T ss_dssp SEEEECSCEEECCGGG--BCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCccChhhh--hcccccceeEeccCCCEEeCCccccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999874 455 48888899999999999999999999999986 67899999999999999863
No 64
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.94 E-value=3.7e-26 Score=269.66 Aligned_cols=266 Identities=18% Similarity=0.160 Sum_probs=200.8
Q ss_pred hhhhhhccccchHHHHHHHhh--------hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEE
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT--------KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKI 866 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~--------~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~ 866 (1074)
++|||||||++|+++|..|++ +++++.+.....+.+..+..+... .+++...+.+.+.+.||+++.++|+.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~~~gv~~~~~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKE-RDDIAFPIRHYVERKGIHFIAQSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSC-HHHHEEECHHHHHTTTCEEECSCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccC-HHHHHHHHHHHHHHCCCEEEEeEEEE
Confidence 359999999999999999987 677777765554444444433322 25666667888888999999999999
Q ss_pred ecCCeEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCCCc---ceechhhHhcchH--------------------
Q psy14927 867 TGPNTVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVDEE---TIVSSTGALSLKK-------------------- 921 (1074)
Q Consensus 867 id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~---~v~t~~~~~~~~~-------------------- 921 (1074)
++++...|++++| .++.||+||||||++|. .+||+..... .+.+.++...+.+
T Consensus 84 id~~~~~V~~~~g--~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~ 161 (437)
T 3sx6_A 84 IDAEAQNITLADG--NTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGA 161 (437)
T ss_dssp EETTTTEEEETTS--CEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTC
T ss_pred EEcCCCEEEECCC--CEEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 9988778888888 67999999999999873 5677643211 2345544432211
Q ss_pred -------------hhHHhhcCCc-----EEEEecCCccCC---CCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCe
Q psy14927 922 -------------GSVWGRLGAE-----VTAIEFMNAIGG---MGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDN 980 (1074)
Q Consensus 922 -------------A~~l~~~G~~-----Vtlv~~~~~~~~---~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~ 980 (1074)
+..+++.|.+ ||++++.+.+.. +.. ++....+.+.|++.||++++++.|++|++ ++
T Consensus 162 g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~-~~~~~~~~~~l~~~gI~~~~~~~v~~v~~--~~ 238 (437)
T 3sx6_A 162 SCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGV-GDSKGILTKGLKEEGIEAYTNCKVTKVED--NK 238 (437)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCC-TTHHHHHHHHHHHTTCEEECSEEEEEEET--TE
T ss_pred CcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcc-hHHHHHHHHHHHHCCCEEEcCCEEEEEEC--Ce
Confidence 2555677764 999999987731 222 34788889999999999999999999986 44
Q ss_pred EEEEEeeccCCCC---ceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCC-CCCCEEEecccCCC----
Q psy14927 981 ITVTIENVKDPTK---KEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQT-VIPNIFAIGDCIHG---- 1052 (1074)
Q Consensus 981 ~~v~~~~~~~~g~---~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~t-s~~~IyAiGD~~~~---- 1052 (1074)
+.++..+. +|+ +.++++|.+++++|++|+..+ ....|+ .+++|+|.||+++|| ++|||||+|||+..
T Consensus 239 v~~~~~~~--~g~~~~~~~i~~D~vv~~~g~~~~~~~--~~~~gl-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~ 313 (437)
T 3sx6_A 239 MYVTQVDE--KGETIKEMVLPVKFGMMIPAFKGVPAV--AGVEGL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVE 313 (437)
T ss_dssp EEEEEECT--TSCEEEEEEEECSEEEEECCEECCHHH--HTSTTT-BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSC
T ss_pred EEEEeccc--CCccccceEEEEeEEEEcCCCcCchhh--hccccc-cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcC
Confidence 44432221 233 678999999999999987654 233566 688999999999998 99999999999873
Q ss_pred --------CCcHHHHHHHHHHHHHHhh
Q psy14927 1053 --------PMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1053 --------~~~~~~A~~~G~~aA~~I~ 1071 (1074)
|+++..|..||+.+|+||+
T Consensus 314 ~~~~~~~~pk~~~~A~~qg~~aA~ni~ 340 (437)
T 3sx6_A 314 TTPVPTGAPKTGYMIESMVSAAVHNIK 340 (437)
T ss_dssp CCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 5689999999999999997
No 65
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.94 E-value=5.7e-26 Score=258.25 Aligned_cols=270 Identities=16% Similarity=0.162 Sum_probs=197.6
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchh-------hhhhhhhHHHhhhhhhHHHHhhhCCeEEEe
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLE-------TMMGTKSAAVKALTGGIAHLFKSNKVTQLN 861 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~-------~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~ 861 (1074)
+.+|+||||||+|+++|+.|++ +++|+.+..|+.+... ..+.........+...+.+.+.+.+++++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 84 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSL 84 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEe
Confidence 3459999999999999999987 7888887776644210 000000001134455566777788999988
Q ss_pred e-eEEEecC--CeEEEEeCCCCeeEEEcCeEEEccCCC---CC--CCCCCCCCC-cceec-hhhHhcc--hH--------
Q psy14927 862 G-HGKITGP--NTVTVIKSDGSTEEVKTKNILIATGSE---VT--PFPGIEVDE-ETIVS-STGALSL--KK-------- 921 (1074)
Q Consensus 862 g-~v~~id~--~~~~v~~~~G~~~~i~~d~lIIATG~~---p~--~ipgi~~~~-~~v~t-~~~~~~~--~~-------- 921 (1074)
+ +|+.++. +.+.|.+.+| .++.||+||+|||+. |. ++||.+... ..+.. ..+.... ..
T Consensus 85 ~~~v~~i~~~~~~~~v~~~~g--~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~ 162 (335)
T 2zbw_A 85 GERAETLEREGDLFKVTTSQG--NAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSKAEFQGKRVLIVGGGD 162 (335)
T ss_dssp SCCEEEEEEETTEEEEEETTS--CEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCGGGGTTCEEEEECSSH
T ss_pred CCEEEEEEECCCEEEEEECCC--CEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCchhhcCCCEEEEECCCH
Confidence 7 6777764 3577777777 679999999999994 42 334432111 11221 1111111 11
Q ss_pred -----hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceE
Q psy14927 922 -----GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEE 996 (1074)
Q Consensus 922 -----A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~ 996 (1074)
|..|.+.|.+|+++++++.+. + .+...+.+.+.+++.||++++++.|.++.++++...|.+.+.. +|+..+
T Consensus 163 ~g~e~a~~l~~~g~~V~~v~~~~~~~-~--~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~-~g~~~~ 238 (335)
T 2zbw_A 163 SAVDWALNLLDTARRITLIHRRPQFR-A--HEASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQ-TQEELA 238 (335)
T ss_dssp HHHHHHHHTTTTSSEEEEECSSSSCC-S--CHHHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETT-TCCEEE
T ss_pred HHHHHHHHHHhhCCEEEEEEcCCccC-c--cHHHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECC-CCceEE
Confidence 777788899999999998876 2 3667788888899999999999999999985443456666421 244578
Q ss_pred EEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCC---CCcHHHHHHHHHHHHHHhhC
Q psy14927 997 LSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHG---PMLAHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 997 i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~---~~~~~~A~~~G~~aA~~I~~ 1072 (1074)
+++|.||+|+|++|++++ +..++++++ +|+|.||++++|+.|||||+|||+.. +.++..|+.+|..+|.+|++
T Consensus 239 i~~D~vi~a~G~~p~~~~--l~~~~~~~~-~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 314 (335)
T 2zbw_A 239 LEVDAVLILAGYITKLGP--LANWGLALE-KNKIKVDTTMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAA 314 (335)
T ss_dssp EECSEEEECCCEEEECGG--GGGSCCCEE-TTEEECCTTCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred EecCEEEEeecCCCCchH--hhhcceecc-CCeeeeCCCCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHH
Confidence 999999999999999987 577888887 78999999999999999999999863 56899999999999999873
No 66
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.94 E-value=2.6e-26 Score=255.97 Aligned_cols=253 Identities=15% Similarity=0.170 Sum_probs=187.5
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhccccccccch-hhhhhhhhHHHhhhhhhHHHHhhhC-CeEEEeeeEEEec
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNL-ETMMGTKSAAVKALTGGIAHLFKSN-KVTQLNGHGKITG 868 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~-~~~~~~~~~~~~~l~~~~~~~l~~~-gV~~~~g~v~~id 868 (1074)
+|+||||||+|+++|..|++ +++|+.+..+..... ..++.........+...+.+.+.+. +++++.++|+.++
T Consensus 4 ~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~ 83 (297)
T 3fbs_A 4 DVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAK 83 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEE
Confidence 49999999999999999998 788875533322211 1112211112245566677777776 8999989988887
Q ss_pred CC--eEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCC-Ccceechhh--HhcchH---------------hhHHh
Q psy14927 869 PN--TVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVD-EETIVSSTG--ALSLKK---------------GSVWG 926 (1074)
Q Consensus 869 ~~--~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~-~~~v~t~~~--~~~~~~---------------A~~l~ 926 (1074)
.. .+.|.+.+| .++.||+||||||+.|. .+|++... ...++++.. ...... |..|.
T Consensus 84 ~~~~~~~v~~~~g--~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~ 161 (297)
T 3fbs_A 84 GSFGEFIVEIDGG--RRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLP 161 (297)
T ss_dssp EETTEEEEEETTS--CEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGG
T ss_pred EcCCeEEEEECCC--CEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhh
Confidence 53 578888888 67999999999999873 34554321 122332221 111111 77788
Q ss_pred hcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEcc
Q psy14927 927 RLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCV 1006 (1074)
Q Consensus 927 ~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~ 1006 (1074)
+.| +|+++++++.. +. ..+.+.|++.||+++. +.|.++.+++ .|.+.+ ++++++|.||+++
T Consensus 162 ~~g-~v~~v~~~~~~----~~----~~~~~~l~~~gv~i~~-~~v~~i~~~~---~v~~~~------g~~~~~D~vi~a~ 222 (297)
T 3fbs_A 162 DWG-ETTFFTNGIVE----PD----ADQHALLAARGVRVET-TRIREIAGHA---DVVLAD------GRSIALAGLFTQP 222 (297)
T ss_dssp GTS-EEEEECTTTCC----CC----HHHHHHHHHTTCEEEC-SCEEEEETTE---EEEETT------SCEEEESEEEECC
T ss_pred hcC-cEEEEECCCCC----CC----HHHHHHHHHCCcEEEc-ceeeeeecCC---eEEeCC------CCEEEEEEEEEcc
Confidence 888 99999887652 22 3456788999999995 8899998743 455554 4589999999999
Q ss_pred CCcccCCccCccccCcccC--CCC-CeeeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHhh
Q psy14927 1007 GRRPYTHNLGLEEIGIEKD--EKG-RVPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1007 G~~p~~~~l~l~~~gl~ld--~~G-~I~Vd~~~~ts~~~IyAiGD~~~~~~~~~~A~~~G~~aA~~I~ 1071 (1074)
|++|++++ +..++++++ +.| +|.||++++|++|||||+|||++.|+++..|+.+|+.||.+|.
T Consensus 223 G~~p~~~~--~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~ 288 (297)
T 3fbs_A 223 KLRITVDW--IEKLGCAVEEGPMGSTIVTDPMKQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAH 288 (297)
T ss_dssp EEECCCSC--HHHHTCCEEEETTEEEECCCTTCBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHH
T ss_pred CcccCchh--HHhcCCccccCCCCceEEeCCCCccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHH
Confidence 99999987 677888877 457 8999999999999999999999988899999999999999986
No 67
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.94 E-value=6.5e-26 Score=255.99 Aligned_cols=265 Identities=19% Similarity=0.229 Sum_probs=193.9
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhh----hhhhhh-HHHhhhhhhHHHHhhhCCeEEEeee
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLET----MMGTKS-AAVKALTGGIAHLFKSNKVTQLNGH 863 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~----~~~~~~-~~~~~l~~~~~~~l~~~gV~~~~g~ 863 (1074)
+.+|+||||||+|+++|+.|++ +++|+. ..|+.+.+.. .+.... -....+...+...+...|++++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH 83 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee
Confidence 3459999999999999999998 677753 4444432211 111100 0113445556677788899999999
Q ss_pred EEEecC--CeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCC----ccee---chhhHhcchH-------------
Q psy14927 864 GKITGP--NTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVDE----ETIV---SSTGALSLKK------------- 921 (1074)
Q Consensus 864 v~~id~--~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~----~~v~---t~~~~~~~~~------------- 921 (1074)
++.++. +.+.+ +.+| .++.||+||+|||+.|. +|.+++.. ..+. +.+......+
T Consensus 84 v~~i~~~~~~~~v-~~~~--~~~~~~~lv~AtG~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e 159 (320)
T 1trb_A 84 INKVDLQNRPFRL-NGDN--GEYTCDALIIATGASAR-YLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVE 159 (320)
T ss_dssp EEEEECSSSSEEE-EESS--CEEEEEEEEECCCEEEC-CCCCHHHHHTBTTTEESCHHHHGGGGTTSEEEEECSSHHHHH
T ss_pred eeEEEecCCEEEE-EeCC--CEEEcCEEEECCCCCcC-CCCCCChHHhCCceeEecccCCccccCCCeEEEECCCHHHHH
Confidence 888875 34555 5556 57999999999999863 23333211 1222 2222211111
Q ss_pred -hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCe-EEEEEeeccCC-CCceEEE
Q psy14927 922 -GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDN-ITVTIENVKDP-TKKEELS 998 (1074)
Q Consensus 922 -A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~~-g~~~~i~ 998 (1074)
|..|.+.|.+||++++.+.+. .++.+.+.+.+.+++.||++++++.|.++..+++. ..|.+.+.. + |++.+++
T Consensus 160 ~A~~l~~~g~~Vtlv~~~~~~~---~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~-~~g~~~~i~ 235 (320)
T 1trb_A 160 EALYLSNIASEVHLIHRRDGFR---AEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQ-NSDNIESLD 235 (320)
T ss_dssp HHHHHTTTSSEEEEECSSSSCC---CCHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCT-TCCCCEEEE
T ss_pred HHHHHHhcCCeEEEEEeCCccc---cCHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEecc-CCCceEEEE
Confidence 778888999999999988765 36778888888899999999999999999886544 346665421 2 4457899
Q ss_pred cCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCC-----CCCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHhh
Q psy14927 999 CDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRF-----QTVIPNIFAIGDCIHG-PMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 999 ~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~-----~ts~~~IyAiGD~~~~-~~~~~~A~~~G~~aA~~I~ 1071 (1074)
+|.||+|+|++|+++++ . .+++++ +|+|.||+++ +|+.|||||+|||+.. +..+..|+.+|+.||.+|.
T Consensus 236 ~D~vv~a~G~~p~~~~~--~-~~l~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 310 (320)
T 1trb_A 236 VAGLFVAIGHSPNTAIF--E-GQLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAE 310 (320)
T ss_dssp CSEEEECSCEEESCGGG--T-TTSCEE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHH
T ss_pred cCEEEEEeCCCCChHHh--c-cccccc-CceEEECCCcccccccCCCCCEEEcccccCCcchhhhhhhccHHHHHHHHH
Confidence 99999999999999874 3 467888 8999999986 7999999999999986 4689999999999999986
No 68
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.93 E-value=2.3e-25 Score=253.06 Aligned_cols=265 Identities=21% Similarity=0.203 Sum_probs=189.5
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhh----ccccccccchhh----hhhhhh-HHHhhhhhhHHHHhhhCCeEE
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQ----AGDKGVKLNLET----MMGTKS-AAVKALTGGIAHLFKSNKVTQ 859 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~----~~~~g~~~~~~~----~~~~~~-~~~~~l~~~~~~~l~~~gV~~ 859 (1074)
+.+|+||||||+|+++|+.|++ +++|+ ....++.+.... .+.... -....+...+...+.+.|+++
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~ 87 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTI 87 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEE
Confidence 3459999999999999999998 67887 344555432211 111100 011345555677778889999
Q ss_pred EeeeEEEecC--CeEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCC----C-cceec---hhhHh--cchH----
Q psy14927 860 LNGHGKITGP--NTVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVD----E-ETIVS---STGAL--SLKK---- 921 (1074)
Q Consensus 860 ~~g~v~~id~--~~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~----~-~~v~t---~~~~~--~~~~---- 921 (1074)
+.++|+.++. +.++|++ +| .++.||+||+|||++|. ++|+.... . ..+.+ .+... ...+
T Consensus 88 ~~~~v~~i~~~~~~~~v~~-~~--~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V 164 (333)
T 1vdc_A 88 FTETVTKVDFSSKPFKLFT-DS--KAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAV 164 (333)
T ss_dssp ECCCCCEEECSSSSEEEEC-SS--EEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEE
T ss_pred EEeEEEEEEEcCCEEEEEE-CC--cEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccchhhcCCCeEEE
Confidence 9998887764 3456766 56 68999999999999863 34443220 0 12222 22222 1111
Q ss_pred ----------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCC--e-EEEEEeec
Q psy14927 922 ----------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGD--N-ITVTIENV 988 (1074)
Q Consensus 922 ----------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~--~-~~v~~~~~ 988 (1074)
|..|.+.|.+||++++++.+. . .+.+ ..+.+++.||++++++.|.++.++++ . ..+.+.+.
T Consensus 165 vG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-~--~~~~---~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~ 238 (333)
T 1vdc_A 165 IGGGDSAMEEANFLTKYGSKVYIIHRRDAFR-A--SKIM---QQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNV 238 (333)
T ss_dssp ECCSHHHHHHHHHHTTTSSEEEEECSSSSCC-S--CHHH---HHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEET
T ss_pred ECCChHHHHHHHHHHhcCCeEEEEecCCcCC-c--cHHH---HHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEec
Confidence 777888899999999988765 1 2222 22445788999999999999998653 3 34666642
Q ss_pred cCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCC-CCCCCCCEEEecccCCC-CCcHHHHHHHHHHH
Q psy14927 989 KDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSR-FQTVIPNIFAIGDCIHG-PMLAHKAEDEGIVC 1066 (1074)
Q Consensus 989 ~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~-~~ts~~~IyAiGD~~~~-~~~~~~A~~~G~~a 1066 (1074)
. +|+..++++|.||+|+|++|+++++ . .+++++++|+|.||++ ++|+.|||||+|||+.. +.++..|+.+|+.|
T Consensus 239 ~-~g~~~~i~~D~vi~a~G~~p~~~~~--~-~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~a 314 (333)
T 1vdc_A 239 V-TGDVSDLKVSGLFFAIGHEPATKFL--D-GGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMA 314 (333)
T ss_dssp T-TCCEEEEECSEEEECSCEEESCGGG--T-TSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHHHHHH
T ss_pred C-CCceEEEecCEEEEEeCCccchHHh--h-ccccccCCCCEEechhhcccCCCCEEEeeeccCCCchhHHHHHHhHHHH
Confidence 2 3555789999999999999999874 3 4788888999999986 68999999999999986 46899999999999
Q ss_pred HHHhh
Q psy14927 1067 VEGIA 1071 (1074)
Q Consensus 1067 A~~I~ 1071 (1074)
|.+|.
T Consensus 315 a~~i~ 319 (333)
T 1vdc_A 315 ALDAE 319 (333)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99986
No 69
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.93 E-value=1.3e-25 Score=255.62 Aligned_cols=264 Identities=15% Similarity=0.199 Sum_probs=188.5
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchh----hhhhhhh-HHHhhhhhhHHHHhhhCCeEEEeee
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLE----TMMGTKS-AAVKALTGGIAHLFKSNKVTQLNGH 863 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~----~~~~~~~-~~~~~l~~~~~~~l~~~gV~~~~g~ 863 (1074)
+.+|+||||||+|+++|+.|++ +++|+. ..|+.+.+. ..+.... -....+...+.+.+.+.|++++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee
Confidence 4569999999999999999988 677754 444433221 1111100 0113455556677778899999999
Q ss_pred EEEecC-CeEEE-EeCCCCeeEEEcCeEEEccCCCCCCCCCCCCCC----cceec---hhhHhcchH-------------
Q psy14927 864 GKITGP-NTVTV-IKSDGSTEEVKTKNILIATGSEVTPFPGIEVDE----ETIVS---STGALSLKK------------- 921 (1074)
Q Consensus 864 v~~id~-~~~~v-~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~~----~~v~t---~~~~~~~~~------------- 921 (1074)
++.++. +.++| .+.+| .++.||+||+|||+.|. .|.+++.. ..+.+ .++.....+
T Consensus 93 v~~i~~~~~~~v~~~~~g--~~~~~d~lviAtG~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e 169 (335)
T 2a87_A 93 VESVSLHGPLKSVVTADG--QTHRARAVILAMGAAAR-YLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAME 169 (335)
T ss_dssp EEEEECSSSSEEEEETTS--CEEEEEEEEECCCEEEC-CCCCTHHHHTBTTTEESCHHHHGGGGTTCEEEEECSSHHHHH
T ss_pred EEEEEeCCcEEEEEeCCC--CEEEeCEEEECCCCCcc-CCCCCchHhccCCceEEeeccchhhcCCCEEEEECCCHHHHH
Confidence 888875 33456 66777 67999999999999873 22333211 12222 222221111
Q ss_pred -hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcC
Q psy14927 922 -GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCD 1000 (1074)
Q Consensus 922 -A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D 1000 (1074)
|..|.+.|.+||++++++.+.. .+.+ ..+.+++.||++++++.++++.++++...+.+.+.. +|++.++++|
T Consensus 170 ~a~~l~~~g~~V~l~~~~~~~~~---~~~~---~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~-~g~~~~i~~D 242 (335)
T 2a87_A 170 EATFLTRFARSVTLVHRRDEFRA---SKIM---LDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTN-TGAETTLPVT 242 (335)
T ss_dssp HHHHHTTTCSEEEEECSSSSCSS---CTTH---HHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEET-TSCCEEECCS
T ss_pred HHHHHHHhCCeEEEEEcCCcCCc---cHHH---HHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcC-CCceEEeecC
Confidence 7778888999999999887752 1111 124456789999999999999876543445555422 3556789999
Q ss_pred EEEEccCCcccCCccCccccCcccCCCCCeeeCCC-CCCCCCCEEEecccCCC-CCcHHHHHHHHHHHHHHhh
Q psy14927 1001 ALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSR-FQTVIPNIFAIGDCIHG-PMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1001 ~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~-~~ts~~~IyAiGD~~~~-~~~~~~A~~~G~~aA~~I~ 1071 (1074)
.||+|+|++|+++++ . .+++++++|+|.||++ ++|+.|||||+|||++. +..+..|+.+|+.||.+|.
T Consensus 243 ~vi~a~G~~p~~~~~--~-~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 243 GVFVAIGHEPRSGLV--R-EAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAE 312 (335)
T ss_dssp CEEECSCEEECCTTT--B-TTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHH
T ss_pred EEEEccCCccChhHh--h-cccccCCCccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHH
Confidence 999999999999874 3 5788888999999985 68999999999999986 4689999999999999986
No 70
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.93 E-value=1.2e-25 Score=264.80 Aligned_cols=262 Identities=18% Similarity=0.240 Sum_probs=199.8
Q ss_pred hhhhhhccccchHHHHHHHhh-------hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEe
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKIT 867 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~i 867 (1074)
++|||||||++|+++|..|++ +++++.+..+..+.+.....+... ..++...+...+.+.||+++.++|+.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRK-FEDISVPLAPLLPKFNIEFINEKAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSC-GGGSEEESTTTGGGGTEEEECSCEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccC-HHHHHHHHHHHHHhcCCEEEEEEEEEE
Confidence 349999999999999999987 788888877766655544433322 255556677778888999999999999
Q ss_pred cCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCC--CCcceechhhHhcchH------------------------
Q psy14927 868 GPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEV--DEETIVSSTGALSLKK------------------------ 921 (1074)
Q Consensus 868 d~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~--~~~~v~t~~~~~~~~~------------------------ 921 (1074)
+++...|.+++| .++.||+||||||++|. +|+++. ....+.+.++...+.+
T Consensus 82 d~~~~~v~~~~g--~~i~~d~liiAtG~~~~-~pg~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G 158 (430)
T 3h28_A 82 DPDANTVTTQSG--KKIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFG 158 (430)
T ss_dssp ETTTTEEEETTC--CEEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCH
T ss_pred ECCCCEEEECCC--cEEECCEEEEcCCcccc-cCCCCCcCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCc
Confidence 988778888888 67999999999999973 455532 1123445444433211
Q ss_pred ---------hhHHhhcC----CcEEEEecCCccCC---CCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEE
Q psy14927 922 ---------GSVWGRLG----AEVTAIEFMNAIGG---MGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTI 985 (1074)
Q Consensus 922 ---------A~~l~~~G----~~Vtlv~~~~~~~~---~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~ 985 (1074)
+..+.+.| .+|+++++.+.+.. +.. +.....+.+.+++.||++++++.|++|++ +. +++
T Consensus 159 ~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~-~~~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~--v~~ 233 (430)
T 3h28_A 159 PAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGI-GASKRLVEDLFAERNIDWIANVAVKAIEP--DK--VIY 233 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCS-TTHHHHHHHHHHHTTCEEECSCEEEEECS--SE--EEE
T ss_pred HHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcc-hHHHHHHHHHHHHCCCEEEeCCEEEEEeC--Ce--EEE
Confidence 24455667 48999999887631 222 34788889999999999999999999976 33 444
Q ss_pred eeccCCCCceEEEcCEEEEccCCcccCCccCccc--cCcccCCCC-CeeeCCCCCC-CCCCEEEecccCCC---------
Q psy14927 986 ENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEE--IGIEKDEKG-RVPVNSRFQT-VIPNIFAIGDCIHG--------- 1052 (1074)
Q Consensus 986 ~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~--~gl~ld~~G-~I~Vd~~~~t-s~~~IyAiGD~~~~--------- 1052 (1074)
++.. +++.++++|.|++++|++|+..+ .. .++ .+++| +|.||+++|| ++|||||+|||++.
T Consensus 234 ~~~~--~~g~~i~~D~vv~a~G~~~~~~l---~~~~~gl-~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~ 307 (430)
T 3h28_A 234 EDLN--GNTHEVPAKFTMFMPSFQGPEVV---ASAGDKV-ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIP 307 (430)
T ss_dssp ECTT--SCEEEEECSEEEEECEEECCHHH---HTTCTTT-BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSC
T ss_pred EecC--CCceEEeeeEEEECCCCccchhH---hhccccC-cCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCC
Confidence 4422 45678999999999999987643 33 466 67889 9999999998 99999999999874
Q ss_pred ---CCcHHHHHHHHHHHHHHhh
Q psy14927 1053 ---PMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1053 ---~~~~~~A~~~G~~aA~~I~ 1071 (1074)
|++++.|..||+.+|+||.
T Consensus 308 ~~~pk~~~~A~~~g~~aa~ni~ 329 (430)
T 3h28_A 308 TGVPKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHH
Confidence 5689999999999999987
No 71
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.93 E-value=4.9e-25 Score=265.29 Aligned_cols=262 Identities=19% Similarity=0.264 Sum_probs=192.1
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccccch----hhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eE
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNL----ETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HG 864 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v 864 (1074)
.+|+||||||||+++|..+++ +++++ ..|+.+.. ..++.........+...+...+.+.||+++.+ +|
T Consensus 213 ~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v 290 (521)
T 1hyu_A 213 YDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSA 290 (521)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCE
T ss_pred ccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEE
Confidence 349999999999999999998 45654 34443321 11111111112345556777788899999999 79
Q ss_pred EEecCC-----eEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCC-Ccceechhh---Hh-cchH-----------
Q psy14927 865 KITGPN-----TVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVD-EETIVSSTG---AL-SLKK----------- 921 (1074)
Q Consensus 865 ~~id~~-----~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~-~~~v~t~~~---~~-~~~~----------- 921 (1074)
+.+++. .+.|.+++| .++.||+||+|||++|. .+||.... ...+..+.. .. ..+.
T Consensus 291 ~~i~~~~~~~~~~~V~~~~g--~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~ 368 (521)
T 1hyu_A 291 SKLVPAATEGGLHQIETASG--AVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGV 368 (521)
T ss_dssp EEEECCSSTTSCEEEEETTS--CEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHHH
T ss_pred EEEEeccCCCceEEEEECCC--CEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCchhhcCCCeEEEECCCHHHH
Confidence 888642 677888888 68999999999999763 34543211 112222211 11 1111
Q ss_pred --hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHh-CCCEEEeCceEEEEEecCCeE-EEEEeeccCCCCceEE
Q psy14927 922 --GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGK-QGMQFKLGTKVTGASKSGDNI-TVTIENVKDPTKKEEL 997 (1074)
Q Consensus 922 --A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~-~gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~~~~i 997 (1074)
|..|++.|.+||++++.+.+. . + ..+.+.|.+ .||++++++.++++.++++.+ .+.+.+.. +|+..++
T Consensus 369 E~A~~L~~~g~~Vtlv~~~~~l~-~--~----~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~-~g~~~~i 440 (521)
T 1hyu_A 369 EAAIDLAGIVEHVTLLEFAPEMK-A--D----QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRV-SGDIHSV 440 (521)
T ss_dssp HHHHHHHHHBSEEEEECSSSSCC-S--C----HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETT-TCCEEEE
T ss_pred HHHHHHHhhCCEEEEEEeCcccC-c--C----HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCC-CCceEEE
Confidence 777888899999999998776 2 2 345567777 699999999999998865443 56666532 3555789
Q ss_pred EcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCC-CcHHHHHHHHHHHHHHhh
Q psy14927 998 SCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGP-MLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 998 ~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~-~~~~~A~~~G~~aA~~I~ 1071 (1074)
++|.||+++|++||++++ .. +++++++|+|.||++++|++|||||+|||++.| +++..|+.+|..||.+|.
T Consensus 441 ~~D~vi~a~G~~pn~~~l--~~-~l~~~~~G~I~Vd~~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~ 512 (521)
T 1hyu_A 441 ALAGIFVQIGLLPNTHWL--EG-ALERNRMGEIIIDAKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAF 512 (521)
T ss_dssp ECSEEEECCCEEESCGGG--TT-TSCBCTTSCBCCCTTCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHH
T ss_pred EcCEEEECcCCCCCchHH--hh-hhccCCCCcEEeCCCCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHH
Confidence 999999999999999874 33 488888999999999999999999999999865 589999999999999986
No 72
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.93 E-value=3e-25 Score=255.18 Aligned_cols=269 Identities=14% Similarity=0.129 Sum_probs=196.5
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchh-------hhhhhhhHHHhhhhhhHHHHhhhCCeEEEe
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLE-------TMMGTKSAAVKALTGGIAHLFKSNKVTQLN 861 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~-------~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~ 861 (1074)
+.+|+||||||+|+++|+.|++ +++|+.+..|+.+... ..+.........+...+.+.+...|++++.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 3459999999999999999998 7888887776644210 001100001244555667777888999988
Q ss_pred e-eEEEecCC---eEEEEeCCCCeeEEEcCeEEEccCCCC--CCCCCCCC-CC----cceec-hhhHhcc--hH------
Q psy14927 862 G-HGKITGPN---TVTVIKSDGSTEEVKTKNILIATGSEV--TPFPGIEV-DE----ETIVS-STGALSL--KK------ 921 (1074)
Q Consensus 862 g-~v~~id~~---~~~v~~~~G~~~~i~~d~lIIATG~~p--~~ipgi~~-~~----~~v~t-~~~~~~~--~~------ 921 (1074)
+ +|+.++.. .+.|.+.+| .++.||+||+|||+.+ +..|++++ .. ..+.. ..+.... ..
T Consensus 94 ~~~v~~i~~~~~~~~~v~~~~g--~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~~~~~~~vvVvG~ 171 (360)
T 3ab1_A 94 NETVTKYTKLDDGTFETRTNTG--NVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVEDFKGKRVVIVGG 171 (360)
T ss_dssp SCCEEEEEECTTSCEEEEETTS--CEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGGGGTTCEEEEECS
T ss_pred CCEEEEEEECCCceEEEEECCC--cEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHHHcCCCcEEEECC
Confidence 7 68777642 577888887 6799999999999942 12223333 11 11221 1111111 11
Q ss_pred -------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeE-EEEEeeccCCCC
Q psy14927 922 -------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNI-TVTIENVKDPTK 993 (1074)
Q Consensus 922 -------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~ 993 (1074)
|..|.+.|.+|+++++++.+. + .+...+.+.+.+++.||++++++.|.++..+++.+ .|.+... +|+
T Consensus 172 G~~g~e~A~~l~~~g~~V~lv~~~~~~~-~--~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~--~g~ 246 (360)
T 3ab1_A 172 GDSALDWTVGLIKNAASVTLVHRGHEFQ-G--HGKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSS--DGS 246 (360)
T ss_dssp SHHHHHHHHHTTTTSSEEEEECSSSSCS-S--CSHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEET--TCC
T ss_pred CHHHHHHHHHHHhcCCEEEEEEcCCCCC-C--CHHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEec--CCC
Confidence 777888899999999998776 2 24566777788889999999999999999865543 4555521 254
Q ss_pred ceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCC---CCCcHHHHHHHHHHHHHHh
Q psy14927 994 KEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIH---GPMLAHKAEDEGIVCVEGI 1070 (1074)
Q Consensus 994 ~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~---~~~~~~~A~~~G~~aA~~I 1070 (1074)
..++++|.||+|+|++|++++ +...+++++ +|+|.||++++|++|||||+|||+. .++++..|..+|..+|.+|
T Consensus 247 ~~~i~~D~vi~a~G~~p~~~~--l~~~~~~~~-~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i 323 (360)
T 3ab1_A 247 KWTVEADRLLILIGFKSNLGP--LARWDLELY-ENALVVDSHMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHS 323 (360)
T ss_dssp EEEEECSEEEECCCBCCSCGG--GGGSSCCEE-TTEEECCTTSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHH
T ss_pred eEEEeCCEEEECCCCCCCHHH--HHhhccccc-cCeeeecCCCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHH
Confidence 578999999999999999987 567788887 7899999999999999999999986 3568999999999999998
Q ss_pred hC
Q psy14927 1071 AG 1072 (1074)
Q Consensus 1071 ~~ 1072 (1074)
++
T Consensus 324 ~~ 325 (360)
T 3ab1_A 324 LS 325 (360)
T ss_dssp HH
T ss_pred Hh
Confidence 73
No 73
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.92 E-value=3.2e-26 Score=270.04 Aligned_cols=263 Identities=19% Similarity=0.127 Sum_probs=187.2
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEec
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITG 868 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id 868 (1074)
.++|+||||||||+++|..|++ ++||+.+..|+.+.+. ++.+. ....+.....+++.+.||+|+.|+.+.
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g-ip~~~--~~~~~~~~~~~~l~~~gv~~~~~~~v~-- 196 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG-IPGFK--LEKSVVERRVKLLADAGVIYHPNFEVG-- 196 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT-SCTTT--SCHHHHHHHHHHHHHTTCEEETTCCBT--
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec-CCCcc--CCHHHHHHHHHHHHHCCcEEEeCCEec--
Confidence 5569999999999999999998 8999988888876543 22221 123455556778888999999995431
Q ss_pred CCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCC-CcceechhhHhc---------------------chH-----
Q psy14927 869 PNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVD-EETIVSSTGALS---------------------LKK----- 921 (1074)
Q Consensus 869 ~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~-~~~v~t~~~~~~---------------------~~~----- 921 (1074)
. .++++++ .+.||+||||||+.++..+.+++. ...+++..+++. ..+
T Consensus 197 ~---~v~~~~~---~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVI 270 (456)
T 2vdc_G 197 R---DASLPEL---RRKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVL 270 (456)
T ss_dssp T---TBCHHHH---HSSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEE
T ss_pred c---EEEhhHh---HhhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEE
Confidence 1 1222222 357999999999974222233322 234554433221 011
Q ss_pred ---------hhHHhhcCC-cEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEe-----
Q psy14927 922 ---------GSVWGRLGA-EVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIE----- 986 (1074)
Q Consensus 922 ---------A~~l~~~G~-~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~----- 986 (1074)
|..+.+.|. +||+++|++.+..+..+.+ .+.+++.||++++++.+++|.+++....|++.
T Consensus 271 GgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e-----~~~~~~~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~ 345 (456)
T 2vdc_G 271 GGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQRE-----VAHAEEEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLG 345 (456)
T ss_dssp CSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHH-----HHHHHHTTCEEECCSSSCCEEEEEEEETTEEEEEEEE
T ss_pred CCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHH-----HHHHHHCCCEEEeCCCceEEeCCCcEEEEEEEEEEec
Confidence 667778887 5999999987633555443 25677889999999999999864221112221
Q ss_pred --eccC-------CCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCC-CCCCCCCEEEecccCCCCCcH
Q psy14927 987 --NVKD-------PTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSR-FQTVIPNIFAIGDCIHGPMLA 1056 (1074)
Q Consensus 987 --~~~~-------~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~-~~ts~~~IyAiGD~~~~~~~~ 1056 (1074)
+.++ +|++.++++|.||+|+|+.|++..+.+..+|++++++|+|.||++ ++|+.|||||+|||+.++.++
T Consensus 346 ~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~~~v 425 (456)
T 2vdc_G 346 VADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGASLV 425 (456)
T ss_dssp EEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSCCSH
T ss_pred ccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCchHH
Confidence 1000 133468999999999999998762115778999999999999987 999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhC
Q psy14927 1057 HKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 1057 ~~A~~~G~~aA~~I~~ 1072 (1074)
..|+.+|+.||.+|.+
T Consensus 426 ~~A~~~G~~aA~~i~~ 441 (456)
T 2vdc_G 426 VWAIRDGRDAAEGIHA 441 (456)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999863
No 74
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.92 E-value=1.5e-25 Score=268.12 Aligned_cols=269 Identities=19% Similarity=0.206 Sum_probs=193.9
Q ss_pred chhhhhhccccchHHHHHHHhh-------hhhhhccccccc-cchhh-hhhhh-hHHHh------------hh--h--hh
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVK-LNLET-MMGTK-SAAVK------------AL--T--GG 847 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~-~~~~~-~~~~~-~~~~~------------~l--~--~~ 847 (1074)
+.+||||||||||++||..|++ +++++.+..+.. +.+.. +.... ..... .+ . ..
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSF 90 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGGG
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchHh
Confidence 4559999999999999988876 688877654321 00000 00000 00000 00 0 00
Q ss_pred H---HH--HhhhCCeEEEee-eEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCCC----Cccee---chh
Q psy14927 848 I---AH--LFKSNKVTQLNG-HGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEVD----EETIV---SST 914 (1074)
Q Consensus 848 ~---~~--~l~~~gV~~~~g-~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~~----~~~v~---t~~ 914 (1074)
+ .. .+.+.||+++.| +|+.+|....+|++++| .++.||+||||||++|..+|..+.. ...++ +.+
T Consensus 91 ~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g--~~i~yd~lviATGs~p~~~~~~~~~~~~~~~~v~~~~~~~ 168 (493)
T 1m6i_A 91 YVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDG--SQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIG 168 (493)
T ss_dssp SBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTS--CEEEEEEEEECCCEEECCCHHHHTSCHHHHHTEEECCSHH
T ss_pred hcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCC--CEEECCEEEECCCCCCCCCCCcccccccccCceEEEcCHH
Confidence 0 01 113569999999 78889887778888888 6899999999999998654432211 11222 444
Q ss_pred hHhcchH--------------------hhHHhh----cCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCce
Q psy14927 915 GALSLKK--------------------GSVWGR----LGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTK 970 (1074)
Q Consensus 915 ~~~~~~~--------------------A~~l~~----~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~ 970 (1074)
++..+.. |..|.+ .|.+|+++++.+.++.+.+++.+...+.+.+++.||++++++.
T Consensus 169 d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~ 248 (493)
T 1m6i_A 169 DFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAI 248 (493)
T ss_dssp HHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCC
T ss_pred HHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCE
Confidence 4433321 555554 5789999998887765667889999999999999999999999
Q ss_pred EEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCC-CCCeeeCCCCCCCCCCEEEeccc
Q psy14927 971 VTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDE-KGRVPVNSRFQTVIPNIFAIGDC 1049 (1074)
Q Consensus 971 v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~-~G~I~Vd~~~~ts~~~IyAiGD~ 1049 (1074)
|+++..+++.+.|++.+ ++++++|.||+|+|.+||+++ ++.+|+++++ +|+|.||++++| .|+|||+|||
T Consensus 249 V~~i~~~~~~~~v~l~d------G~~i~aD~Vv~a~G~~pn~~l--~~~~gl~~~~~~ggi~Vd~~l~t-~~~IyA~GD~ 319 (493)
T 1m6i_A 249 VQSVGVSSGKLLIKLKD------GRKVETDHIVAAVGLEPNVEL--AKTGGLEIDSDFGGFRVNAELQA-RSNIWVAGDA 319 (493)
T ss_dssp EEEEEEETTEEEEEETT------SCEEEESEEEECCCEEECCTT--HHHHTCCBCTTTCSEECCTTCEE-ETTEEECGGG
T ss_pred EEEEEecCCeEEEEECC------CCEEECCEEEECCCCCccHHH--HHHcCCccccCCCcEEECCCccc-CCCeeEeeee
Confidence 99998766666666544 458999999999999999987 6788898886 689999999998 6999999999
Q ss_pred CCCC---------CcHHHHHHHHHHHHHHhhCC
Q psy14927 1050 IHGP---------MLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1050 ~~~~---------~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
+..+ ..+..|..||+.||.||+|.
T Consensus 320 a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~ 352 (493)
T 1m6i_A 320 ACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGA 352 (493)
T ss_dssp EEEEETTTEEECCCCHHHHHHHHHHHHHHHTSC
T ss_pred EeccCcccCccccchHHHHHHHHHHHHHHhcCC
Confidence 8632 24678999999999999874
No 75
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.92 E-value=1.2e-25 Score=263.28 Aligned_cols=261 Identities=15% Similarity=0.187 Sum_probs=196.0
Q ss_pred hhhhhccccchHHHHHHHhh--------hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEe
Q psy14927 796 VVLNTLGNCAAVQANYHLAT--------KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKIT 867 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~--------~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~i 867 (1074)
+|||||||++|+++|..|++ +++|+.+..+..+.+........ ...++...+.+.+.+.||+++.++|+.+
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVR-DVDELKVDLSEALPEKGIQFQEGTVEKI 81 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCC-CCCCEEEEHHHHTGGGTCEEEECEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCc-CHHHHHHHHHHHHhhCCeEEEEeeEEEE
Confidence 49999999999999999986 67887776655444433332222 1245566678888888999999999999
Q ss_pred cCCeEEEEeCCCC--eeEEEcCeEEEccCCCCC--CCCCCCCCCcceechhhHhcch-----------------------
Q psy14927 868 GPNTVTVIKSDGS--TEEVKTKNILIATGSEVT--PFPGIEVDEETIVSSTGALSLK----------------------- 920 (1074)
Q Consensus 868 d~~~~~v~~~~G~--~~~i~~d~lIIATG~~p~--~ipgi~~~~~~v~t~~~~~~~~----------------------- 920 (1074)
+++...|++.+|. ..++.||+||||||++|. .+||+......+.+.++...+.
T Consensus 82 ~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~ 161 (409)
T 3h8l_A 82 DAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHN 161 (409)
T ss_dssp ETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCS
T ss_pred eCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCC
Confidence 8876566666552 245999999999999873 3555432111222222211110
Q ss_pred ----------------------H-----hhHHhhcCC----cEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCc
Q psy14927 921 ----------------------K-----GSVWGRLGA----EVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGT 969 (1074)
Q Consensus 921 ----------------------~-----A~~l~~~G~----~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~ 969 (1074)
+ +..+.+.|. +|+++++.+ ++ +.+++.+.+.+.+.+++.||++++++
T Consensus 162 ~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l-~~~~~~~~~~~~~~l~~~gV~~~~~~ 239 (409)
T 3h8l_A 162 PKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YL-SDLSPNSRKAVASIYNQLGIKLVHNF 239 (409)
T ss_dssp SCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SS-TTBCHHHHHHHHHHHHHHTCEEECSC
T ss_pred ccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-cc-cccCHHHHHHHHHHHHHCCCEEEcCC
Confidence 1 345667774 899999988 66 67889999999999999999999999
Q ss_pred eEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcc-cCCCCCeeeCCCCCC-CCCCEEEec
Q psy14927 970 KVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIE-KDEKGRVPVNSRFQT-VIPNIFAIG 1047 (1074)
Q Consensus 970 ~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~-ld~~G~I~Vd~~~~t-s~~~IyAiG 1047 (1074)
.|++++++ + |.+.+ ++++++|.||+++|++|+. + +...++. .+++|+|.||++++| ++||||++|
T Consensus 240 ~v~~i~~~--~--v~~~~------g~~~~~D~vi~a~G~~~~~-~--l~~~~~~l~~~~G~i~vd~~~~~~~~~~vfa~G 306 (409)
T 3h8l_A 240 KIKEIREH--E--IVDEK------GNTIPADITILLPPYTGNP-A--LKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVG 306 (409)
T ss_dssp CEEEECSS--E--EEETT------SCEEECSEEEEECCEECCH-H--HHTSCGGGSCTTSCBCBBTTSBBSSCTTEEECG
T ss_pred ceEEECCC--e--EEECC------CCEEeeeEEEECCCCCccH-H--HHhccccCcCCCCCEEeCcccccCCCCCEEEee
Confidence 99999763 3 55544 4589999999999999985 3 4555333 467899999999998 999999999
Q ss_pred ccCC--CCCcHHHHHHHHHHHHHHhhC
Q psy14927 1048 DCIH--GPMLAHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 1048 D~~~--~~~~~~~A~~~G~~aA~~I~~ 1072 (1074)
||++ .|+++..|..||..+|.||++
T Consensus 307 D~~~~~~~~~~~~A~~q~~~aa~~i~~ 333 (409)
T 3h8l_A 307 DANSMTVPKLGYLAVMTGRIAAQHLAN 333 (409)
T ss_dssp GGBTTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred hhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 9997 477899999999999999974
No 76
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.90 E-value=3.5e-23 Score=238.42 Aligned_cols=261 Identities=9% Similarity=0.086 Sum_probs=181.6
Q ss_pred hhhhhhccccchHHHHHHHhh------hhhhhccccccccch-h---------------hh------hhh--------h-
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT------KLFTQAGDKGVKLNL-E---------------TM------MGT--------K- 837 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~------~l~e~~~~~g~~~~~-~---------------~~------~~~--------~- 837 (1074)
.+|+||||||+|+++|..|++ +++|+.+ .|+.+.. + .+ ... .
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 83 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEE 83 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhcccccccccccccc
Confidence 459999999999999999987 5677665 4332100 0 00 000 0
Q ss_pred hHHHhhhhhhHHHHhhhCCeEEEee-eEEEecCC--eEEEEeCCCCeeEEEcCeEEEccCCCCC-CCCCCCCCCcceech
Q psy14927 838 SAAVKALTGGIAHLFKSNKVTQLNG-HGKITGPN--TVTVIKSDGSTEEVKTKNILIATGSEVT-PFPGIEVDEETIVSS 913 (1074)
Q Consensus 838 ~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id~~--~~~v~~~~G~~~~i~~d~lIIATG~~p~-~ipgi~~~~~~v~t~ 913 (1074)
......+...+...+.+.|++++.+ .|+.++.. .+.|.+.+| ++.||+||||||+.+. .+|+ ..++++
T Consensus 84 ~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g---~~~~d~vVlAtG~~~~p~ip~-----~~~~~~ 155 (369)
T 3d1c_A 84 HISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE---TYHADYIFVATGDYNFPKKPF-----KYGIHY 155 (369)
T ss_dssp SCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC---CEEEEEEEECCCSTTSBCCCS-----SSCEEG
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC---EEEeCEEEECCCCCCccCCCC-----Cceech
Confidence 0001233444566777889999998 57777754 577777766 5899999999999863 3443 223333
Q ss_pred hhHhcchH------------------hhHHhhcCCcEEEEecCCccCCC------CCCHHHHHHHHHHHHhCC-CEEEeC
Q psy14927 914 TGALSLKK------------------GSVWGRLGAEVTAIEFMNAIGGM------GIDGEVAKQFQRILGKQG-MQFKLG 968 (1074)
Q Consensus 914 ~~~~~~~~------------------A~~l~~~G~~Vtlv~~~~~~~~~------~~~~~~~~~~~~~l~~~g-V~i~~~ 968 (1074)
.++..... |..|.+.|.+||++++++.++.+ .+++...+.+.+.|++.| |+++++
T Consensus 156 ~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~ 235 (369)
T 3d1c_A 156 SEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVH 235 (369)
T ss_dssp GGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECS
T ss_pred hhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecC
Confidence 33322211 77888899999999999877632 256777888889999997 999999
Q ss_pred ceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCC-CCCCCCCEEEec
Q psy14927 969 TKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSR-FQTVIPNIFAIG 1047 (1074)
Q Consensus 969 ~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~-~~ts~~~IyAiG 1047 (1074)
+.|.++..+++.+.+++.+ |+ ....+|.||+|+|++|+++++ ...+++ +++|+|.||++ ++|++|||||+|
T Consensus 236 ~~v~~i~~~~~~~~v~~~~----g~-~~~~~d~vi~a~G~~~~~~~~--~~~~~~-~~~g~i~v~~~~~~t~~~~v~a~G 307 (369)
T 3d1c_A 236 YTVKDIDFNNGQYHISFDS----GQ-SVHTPHEPILATGFDATKNPI--VQQLFV-TTNQDIKLTTHDESTRYPNIFMIG 307 (369)
T ss_dssp CCEEEEEEETTEEEEEESS----SC-CEEESSCCEECCCBCGGGSHH--HHHHSC-CTTSCCCBCTTSBBSSSTTEEECS
T ss_pred cEEEEEEecCCceEEEecC----Ce-EeccCCceEEeeccCCccchh--hhhhcc-CCCCCEEechhhcccCCCCeEEec
Confidence 9999997666666676654 32 234579999999999999763 344566 78899999975 668999999999
Q ss_pred ccCCCCC----cHHHHHHHHHHHHHHhhC
Q psy14927 1048 DCIHGPM----LAHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 1048 D~~~~~~----~~~~A~~~G~~aA~~I~~ 1072 (1074)
||+..+. .+..+..+|..+|++|.+
T Consensus 308 D~~~~~~~~~~~~~~~~~~a~~~a~~l~~ 336 (369)
T 3d1c_A 308 ATVENDNAKLCYIYKFRARFAVLAHLLTQ 336 (369)
T ss_dssp TTCCCSSCCCCSHHHHGGGHHHHHHHHHH
T ss_pred cccccCCeeEEEEehhhHHHHHHHHHHhc
Confidence 9987532 345677889999999875
No 77
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.89 E-value=5.2e-24 Score=274.96 Aligned_cols=263 Identities=17% Similarity=0.105 Sum_probs=189.3
Q ss_pred chhhhhhccccchHHHHHHHhh------hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEe
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT------KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKIT 867 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~------~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~i 867 (1074)
.++|+||||||||++||..|++ ++||+.+..||.+... ++.+.. ...+..+..+++.+.||+|+.|+++..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~-ip~~~~--~~~~~~~~~~~~~~~gv~~~~~~~v~~ 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSE-IPQFRL--PYDVVNFEIELMKDLGVKIICGKSLSE 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHT-SCTTTS--CHHHHHHHHHHHHTTTCEEEESCCBST
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccccc-CCcccC--CHHHHHHHHHHHHHCCcEEEcccEecc
Confidence 5569999999999999999998 6888887787765322 222211 123444556778889999999964421
Q ss_pred cCCeEEEEeCCCCeeEEEcCeEEEccCCC-CCCCC---CCCCCCcceechhhHhcc----------------h----H--
Q psy14927 868 GPNTVTVIKSDGSTEEVKTKNILIATGSE-VTPFP---GIEVDEETIVSSTGALSL----------------K----K-- 921 (1074)
Q Consensus 868 d~~~~~v~~~~G~~~~i~~d~lIIATG~~-p~~ip---gi~~~~~~v~t~~~~~~~----------------~----~-- 921 (1074)
. .++++++ .++.||+||||||+. |..+| |++. ...++++.+++.. . .
T Consensus 264 --~--~v~~~~~--~~~~~d~vvlAtGa~~p~~l~~~~G~~~-~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~Vv 336 (1025)
T 1gte_A 264 --N--EITLNTL--KEEGYKAAFIGIGLPEPKTDDIFQGLTQ-DQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVI 336 (1025)
T ss_dssp --T--SBCHHHH--HHTTCCEEEECCCCCEECCCGGGTTCCT-TTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEE
T ss_pred --c--eEEhhhc--CccCCCEEEEecCCCCCCCCCCCCCCCC-CCCEEEhHHHHHHHHhhcccccccccccccccCCcEE
Confidence 1 2333333 347899999999994 65443 4322 2457776665431 0 1
Q ss_pred -----------hhHHhhcCC-cEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeE-EEEEeec
Q psy14927 922 -----------GSVWGRLGA-EVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNI-TVTIENV 988 (1074)
Q Consensus 922 -----------A~~l~~~G~-~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~-~v~~~~~ 988 (1074)
|..+.++|. +||++++++....+.+++++ +.+++.||++++++.+.++..+++.+ .|++.+.
T Consensus 337 VIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~e~-----~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~ 411 (1025)
T 1gte_A 337 VLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEV-----ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRT 411 (1025)
T ss_dssp EECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHHHH-----HHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEE
T ss_pred EECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHHHH-----HHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEe
Confidence 778888996 89999999843336666554 46778899999999999998754443 3444310
Q ss_pred --cCC-------CCceEEEcCEEEEccCCcccCCccCccc-cCcccCCCCCeeeCC-CCCCCCCCEEEecccCCCCCcHH
Q psy14927 989 --KDP-------TKKEELSCDALLVCVGRRPYTHNLGLEE-IGIEKDEKGRVPVNS-RFQTVIPNIFAIGDCIHGPMLAH 1057 (1074)
Q Consensus 989 --~~~-------g~~~~i~~D~vi~a~G~~p~~~~l~l~~-~gl~ld~~G~I~Vd~-~~~ts~~~IyAiGD~~~~~~~~~ 1057 (1074)
+++ |++.++++|.||+++|++|+...+ +.. .|+++|++|+|.||+ +++|+.|||||+|||++++.++.
T Consensus 412 ~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l-~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~~~~ 490 (1025)
T 1gte_A 412 EQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKV-KEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMANTTV 490 (1025)
T ss_dssp EECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHH-HHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSCCCHH
T ss_pred EEcCCCCcccCCCceEEEECCEEEECCCCCCCchhh-hhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCchHHH
Confidence 001 223579999999999998754332 333 589999999999997 89999999999999999888999
Q ss_pred HHHHHHHHHHHHhhC
Q psy14927 1058 KAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 1058 ~A~~~G~~aA~~I~~ 1072 (1074)
.|+.+|+.||.+|.+
T Consensus 491 ~A~~~G~~aA~~i~~ 505 (1025)
T 1gte_A 491 ESVNDGKQASWYIHK 505 (1025)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999973
No 78
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=3.7e-23 Score=236.60 Aligned_cols=260 Identities=15% Similarity=0.165 Sum_probs=176.1
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccccchh-------------hhhhhh-------hHHHhhhhhhHH
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLE-------------TMMGTK-------SAAVKALTGGIA 849 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~-------------~~~~~~-------~~~~~~l~~~~~ 849 (1074)
.+|+||||||+|+++|..|++ +++|+.+..|+.+... .++... ......+...+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 359999999999999999998 8899887776653210 000000 000134555677
Q ss_pred HHhhhCCeEEEee-eEEEecC--CeEE-EEeCCCCeeEEEcCeEEEccCC--CC--CCCCCCCCCCcceechhhHhcchH
Q psy14927 850 HLFKSNKVTQLNG-HGKITGP--NTVT-VIKSDGSTEEVKTKNILIATGS--EV--TPFPGIEVDEETIVSSTGALSLKK 921 (1074)
Q Consensus 850 ~~l~~~gV~~~~g-~v~~id~--~~~~-v~~~~G~~~~i~~d~lIIATG~--~p--~~ipgi~~~~~~v~t~~~~~~~~~ 921 (1074)
..+...|++++.+ +|+.++. +.+. |.+.+| ++.||+||+|||. .| +.+||........++...+.....
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g---~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 160 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR---QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYSTPAP 160 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC---EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCCSGG
T ss_pred HHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC---EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCChhh
Confidence 7788889999998 6777754 4566 777776 7999999999996 44 344554322223333333222111
Q ss_pred ------------------hhHHhhcCCcEEEEecC-CccCCCCC-CHHHHHHHHHHHH----------------------
Q psy14927 922 ------------------GSVWGRLGAEVTAIEFM-NAIGGMGI-DGEVAKQFQRILG---------------------- 959 (1074)
Q Consensus 922 ------------------A~~l~~~G~~Vtlv~~~-~~~~~~~~-~~~~~~~~~~~l~---------------------- 959 (1074)
|..|.+.| +||++.++ +.+++... ++.+.+.+.+.+.
T Consensus 161 ~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (357)
T 4a9w_A 161 FAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMVP 239 (357)
T ss_dssp GTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC----------------------CBCCCH
T ss_pred cCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccccCcccCh
Confidence 77788888 69999988 45552222 2333333333332
Q ss_pred ------hCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeC
Q psy14927 960 ------KQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVN 1033 (1074)
Q Consensus 960 ------~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd 1033 (1074)
+.|+ +..+..+.+++.+ + +.+.+ ++++++|.||+++|++|++++ +...++. +++|+|.||
T Consensus 240 ~~~~~~~~g~-i~~~~~v~~~~~~--~--v~~~~------g~~i~~D~vi~a~G~~p~~~~--l~~~gl~-~~~G~i~vd 305 (357)
T 4a9w_A 240 PVLDARARGV-LAAVPPPARFSPT--G--MQWAD------GTERAFDAVIWCTGFRPALSH--LKGLDLV-TPQGQVEVD 305 (357)
T ss_dssp HHHHHHHTTC-CCEECCCSEEETT--E--EECTT------SCEEECSEEEECCCBCCCCGG--GTTTTCB-CTTSCBCBC
T ss_pred hHHHHHhcCc-eEEecCcceEeCC--e--eEECC------CCEecCCEEEECCCcCCCCcc--cCccccc-CCCCCcccc
Confidence 3444 4445566666552 2 44433 468999999999999999988 5778888 889999999
Q ss_pred CC--CCCCCCCEEEec--ccCC-CCCcHHHHHHHHHHHHHHhhC
Q psy14927 1034 SR--FQTVIPNIFAIG--DCIH-GPMLAHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 1034 ~~--~~ts~~~IyAiG--D~~~-~~~~~~~A~~~G~~aA~~I~~ 1072 (1074)
++ ++|+.|||||+| ||++ .+..+..|..+|+.+|.+|..
T Consensus 306 ~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~ 349 (357)
T 4a9w_A 306 GSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTA 349 (357)
T ss_dssp TTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHH
T ss_pred CCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHH
Confidence 98 889999999999 6666 466788899999999999863
No 79
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.88 E-value=6.7e-23 Score=242.36 Aligned_cols=263 Identities=12% Similarity=0.100 Sum_probs=181.6
Q ss_pred chhhhhhccccchHHHHHHHhh-------hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEE
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKI 866 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~ 866 (1074)
.++|+||||||+|+.+|..|++ ++|++.+.+++.+.+...+.+ . ....+...+.+.+.+.||+|+.++..
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~-~-~~~~~~~~~~~~~~~~gv~~~~~~~v- 82 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDH-P-EVKNVINTFTQTARSDRCAFYGNVEV- 82 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTC-G-GGGGHHHHHHHHHTSTTEEEEBSCCB-
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCC-c-cHHHHHHHHHHHHHhCCcEEEeeeEE-
Confidence 3459999999999999999987 688888777766544322222 1 12455666778888899999998432
Q ss_pred ecCCeEEEEeCCCCeeEEEcCeEEEccCCCCCCCCCCCC-CCcceechhhHhc--------------c--hH--------
Q psy14927 867 TGPNTVTVIKSDGSTEEVKTKNILIATGSEVTPFPGIEV-DEETIVSSTGALS--------------L--KK-------- 921 (1074)
Q Consensus 867 id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~~ipgi~~-~~~~v~t~~~~~~--------------~--~~-------- 921 (1074)
. . .|++.+. ++.||+||||||+.|+..|.+++ +...++++.+++. + +.
T Consensus 83 -~-~--~V~~~~~---~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~ 155 (460)
T 1cjc_A 83 -G-R--DVTVQEL---QDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGN 155 (460)
T ss_dssp -T-T--TBCHHHH---HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSH
T ss_pred -e-e--EEEeccc---eEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCH
Confidence 2 1 1323332 47899999999998632233333 2345777666521 1 11
Q ss_pred -----hhHHh--------------------hcCC-cEEEEecCCccCC-------------CC-----------------
Q psy14927 922 -----GSVWG--------------------RLGA-EVTAIEFMNAIGG-------------MG----------------- 945 (1074)
Q Consensus 922 -----A~~l~--------------------~~G~-~Vtlv~~~~~~~~-------------~~----------------- 945 (1074)
|..|. +.|. +|+|+.|++.+.. |.
T Consensus 156 ~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~ 235 (460)
T 1cjc_A 156 VALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRI 235 (460)
T ss_dssp HHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHT
T ss_pred HHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhh
Confidence 66666 5676 7999999886521 11
Q ss_pred --CCHH---HHHHHHHHHHh--------------CCCEEEeCceEEEEEecC-C--eEEEEEeecc-----------CCC
Q psy14927 946 --IDGE---VAKQFQRILGK--------------QGMQFKLGTKVTGASKSG-D--NITVTIENVK-----------DPT 992 (1074)
Q Consensus 946 --~~~~---~~~~~~~~l~~--------------~gV~i~~~~~v~~i~~~~-~--~~~v~~~~~~-----------~~g 992 (1074)
.++. +.+.+.+.+.+ .||++++++.+.+|.+++ + ...|++.+.. .+|
T Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g 315 (460)
T 1cjc_A 236 KEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTG 315 (460)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEE
T ss_pred hhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCC
Confidence 1111 22333344445 899999999999998763 2 2234443200 013
Q ss_pred CceEEEcCEEEEccCCcccCCccCccccCc-ccCCCCCeeeCCCCCCC-CCCEEEecccCCCCC-cHHHHHHHHHHHHHH
Q psy14927 993 KKEELSCDALLVCVGRRPYTHNLGLEEIGI-EKDEKGRVPVNSRFQTV-IPNIFAIGDCIHGPM-LAHKAEDEGIVCVEG 1069 (1074)
Q Consensus 993 ~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl-~ld~~G~I~Vd~~~~ts-~~~IyAiGD~~~~~~-~~~~A~~~G~~aA~~ 1069 (1074)
+.++++||+||+++|++|++ + .|+ ++|++|.|.||++++|+ +|||||+|||+.+|. .+..|+.+|..+|.+
T Consensus 316 ~~~~i~~d~Vi~a~G~~p~~-l-----~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~ 389 (460)
T 1cjc_A 316 DVEDLPCGLVLSSIGYKSRP-I-----DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQI 389 (460)
T ss_dssp EEEEEECSEEEECCCEECCC-C-----CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHH
T ss_pred ceEEEEcCEEEECCCCCCCC-C-----CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHH
Confidence 44789999999999999997 2 467 88888999999999998 799999999998765 467899999999999
Q ss_pred hhC
Q psy14927 1070 IAG 1072 (1074)
Q Consensus 1070 I~~ 1072 (1074)
|++
T Consensus 390 i~~ 392 (460)
T 1cjc_A 390 LLQ 392 (460)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 80
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.86 E-value=1.9e-22 Score=238.26 Aligned_cols=259 Identities=13% Similarity=0.147 Sum_probs=179.5
Q ss_pred hhhhhhccccchHHHHHHHhh------------hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT------------KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG 862 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~------------~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g 862 (1074)
++|+||||||||+.+|..|++ ++|++.+.+++.+.+...+.+. ....+...+...+.+.||+|+.+
T Consensus 4 ~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~--~~~~~~~~~~~~~~~~~v~~~~~ 81 (456)
T 1lqt_A 4 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHP--KIKSISKQFEKTAEDPRFRFFGN 81 (456)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCT--GGGGGHHHHHHHHTSTTEEEEES
T ss_pred CEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCC--CHHHHHHHHHHHHhcCCCEEEee
Confidence 459999999999999999866 3677777777665443222221 22456666778888899999988
Q ss_pred eEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCC-CC--CCCCCCCCCcceechhhHh-----------cc-----hH--
Q psy14927 863 HGKITGPNTVTVIKSDGSTEEVKTKNILIATGSE-VT--PFPGIEVDEETIVSSTGAL-----------SL-----KK-- 921 (1074)
Q Consensus 863 ~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~-p~--~ipgi~~~~~~v~t~~~~~-----------~~-----~~-- 921 (1074)
. .++ . .|+++++ ++.||+||||||+. |. ++||.. ...++++.++. .. ..
T Consensus 82 v--~v~-~--~v~~~~~---~~~~d~lViAtG~~~~~~~~ipG~~--~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vv 151 (456)
T 1lqt_A 82 V--VVG-E--HVQPGEL---SERYDAVIYAVGAQSDRMLNIPGED--LPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAV 151 (456)
T ss_dssp C--CBT-T--TBCHHHH---HHHSSEEEECCCCCEECCCCCTTTT--STTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEE
T ss_pred E--EEC-C--EEEECCC---eEeCCEEEEeeCCCCCCCCCCCCCC--CCCcEEHHHHHhhhhcCcccccchhhcCCCEEE
Confidence 3 232 2 2334444 47899999999997 33 345543 33566666552 11 11
Q ss_pred -----------hhHHhhc--------------------C-CcEEEEecCCccCCCCCCH-------------------HH
Q psy14927 922 -----------GSVWGRL--------------------G-AEVTAIEFMNAIGGMGIDG-------------------EV 950 (1074)
Q Consensus 922 -----------A~~l~~~--------------------G-~~Vtlv~~~~~~~~~~~~~-------------------~~ 950 (1074)
|..|.+. | .+|+++.|++.+. ..+.+ ++
T Consensus 152 VIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~-~~f~~~elrel~~lp~~~~~~~~~~~ 230 (456)
T 1lqt_A 152 VIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQ-AAFTTLELRELADLDGVDVVIDPAEL 230 (456)
T ss_dssp EECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGG-CCCCHHHHHHGGGCTTEEEECCGGGG
T ss_pred EECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhh-hccChHHHHHhhcCCCceeeeChHHh
Confidence 5556553 5 4999999988765 22321 11
Q ss_pred ------------------HHHHHHHHHh------CCCEEEeCceEEEEEecCCeEEEEEeec----c--------CCCCc
Q psy14927 951 ------------------AKQFQRILGK------QGMQFKLGTKVTGASKSGDNITVTIENV----K--------DPTKK 994 (1074)
Q Consensus 951 ------------------~~~~~~~l~~------~gV~i~~~~~v~~i~~~~~~~~v~~~~~----~--------~~g~~ 994 (1074)
.+.+.+.+.+ .||++++++.+.+|.+++....|++.+. + .+|+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~ 310 (456)
T 1lqt_A 231 DGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGER 310 (456)
T ss_dssp TTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEE
T ss_pred ccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCce
Confidence 2334444555 7999999999999987643223444320 0 01334
Q ss_pred eEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCC-CCCCCEEEecccCCCCC-cHHHHHHHHHHHHHHhhC
Q psy14927 995 EELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQ-TVIPNIFAIGDCIHGPM-LAHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 995 ~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~-ts~~~IyAiGD~~~~~~-~~~~A~~~G~~aA~~I~~ 1072 (1074)
++++||+||+++|++|++ + .|++++++|+|.+|++++ |+.|||||+|||+.+|. .+..|+.+|..+|.+|++
T Consensus 311 ~~i~~d~vi~a~G~~p~~-l-----~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~ 384 (456)
T 1lqt_A 311 EELPAQLVVRSVGYRGVP-T-----PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIK 384 (456)
T ss_dssp EEEECSEEEECSCEECCC-C-----TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHH
T ss_pred EEEEcCEEEEccccccCC-C-----CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHH
Confidence 679999999999999988 2 367788889999999999 89999999999998776 466899999999999874
No 81
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.86 E-value=3.2e-22 Score=248.90 Aligned_cols=247 Identities=17% Similarity=0.136 Sum_probs=185.1
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhC-CeEEEeeeEEEe
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSN-KVTQLNGHGKIT 867 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~-gV~~~~g~v~~i 867 (1074)
+++||||||||+|+++|+.|++ +++|+.+..|+.+......++.... ..+..++...+.+. ||+++.++..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~gv~~~~~~~v-- 467 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAW-GRVKEYREAVLAELPNVEIYRESPM-- 467 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGG-GHHHHHHHHHHHTCTTEEEESSCCC--
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhHH-HHHHHHHHHHHHHcCCCEEEECCee--
Confidence 5669999999999999999999 8999999998887665555544432 55666677778887 9999988421
Q ss_pred cCCeEEEEeCCCCeeEEEcCeEEEccCCCCC----------CCCCCCCCCcceechhhHhcchH----------------
Q psy14927 868 GPNTVTVIKSDGSTEEVKTKNILIATGSEVT----------PFPGIEVDEETIVSSTGALSLKK---------------- 921 (1074)
Q Consensus 868 d~~~~~v~~~~G~~~~i~~d~lIIATG~~p~----------~ipgi~~~~~~v~t~~~~~~~~~---------------- 921 (1074)
+..++ .++.||+||||||+.|. ++||. +...+++..+++....
T Consensus 468 -------~~~~~--~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~--~~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~ 536 (690)
T 3k30_A 468 -------TGDDI--VEFGFEHVITATGATWRTDGVARFHTTALPIA--EGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYL 536 (690)
T ss_dssp -------CHHHH--HHTTCCEEEECCCEEECSSCCSSSCSSCCCBC--TTSEEECHHHHHTTCCCSSSEEEEEECSCSSH
T ss_pred -------cHHHH--hhcCCCEEEEcCCCccccccccccCCCCCCCC--CCCcEEcHHHHhCCCCCCCCEEEEEcCCCCcc
Confidence 11222 35789999999999842 33443 2245677766554211
Q ss_pred ----hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEE
Q psy14927 922 ----GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEEL 997 (1074)
Q Consensus 922 ----A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i 997 (1074)
|..|.+.|.+||++++.+.++....++.....+.+.|++.||++++++.|++|++ +++.+.... +++++++
T Consensus 537 g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~--~~~~v~~~~---~~~~~~i 611 (690)
T 3k30_A 537 GGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGA--GGVTVRDTY---ASIEREL 611 (690)
T ss_dssp HHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEET--TEEEEEETT---TCCEEEE
T ss_pred HHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEEC--CeEEEEEcc---CCeEEEE
Confidence 7788889999999999988873223355677888999999999999999999986 444444322 3557789
Q ss_pred EcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 998 SCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 998 ~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
++|.||+|+|++|++.++ ..++.. +. +|++|+||++|||+..+ .+..|+.+|+.||.+|.+.
T Consensus 612 ~aD~VV~A~G~~p~~~l~--~~l~~~----~~-------~t~~~~VyaiGD~~~~~-~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 612 ECDAVVMVTARLPREELY--LDLVAR----RD-------AGEIASVRGIGDAWAPG-TIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp ECSEEEEESCEEECCHHH--HHHHHH----HH-------HTSCSEEEECGGGTSCB-CHHHHHHHHHHHHHHTTCC
T ss_pred ECCEEEECCCCCCChHHH--HHHhhh----hc-------ccCCCCEEEEeCCCchh-hHHHHHHHHHHHHHHHHhh
Confidence 999999999999999863 333222 11 78999999999999865 6677999999999999863
No 82
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.85 E-value=2.6e-21 Score=248.12 Aligned_cols=256 Identities=15% Similarity=0.155 Sum_probs=180.8
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchh--hhhhhhhHHHhhhhhhHHHHhhhC-CeEEEee-eE
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLE--TMMGTKSAAVKALTGGIAHLFKSN-KVTQLNG-HG 864 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~--~~~~~~~~~~~~l~~~~~~~l~~~-gV~~~~g-~v 864 (1074)
+.+||||||||||++||..+++ +++|+.+..|+.+... ....... ..++...+.+.+... +|+++.+ +|
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~--~~~~~~~~~~~l~~~~~v~~~~~~~V 205 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMD--SSAWIEQVTSELAEAEETTHLQRTTV 205 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEE--HHHHHHHHHHHHHHSTTEEEESSEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCC--HHHHHHHHHHHHhhcCCcEEEeCCEE
Confidence 4569999999999999999998 8999988888766521 1111111 123333444555554 9999998 57
Q ss_pred EEecCCeEEEEe---------C------CCCeeEEEcCeEEEccCCCCC--CCCCCCCCCcceechhhH---hcc-----
Q psy14927 865 KITGPNTVTVIK---------S------DGSTEEVKTKNILIATGSEVT--PFPGIEVDEETIVSSTGA---LSL----- 919 (1074)
Q Consensus 865 ~~id~~~~~v~~---------~------~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~~v~t~~~~---~~~----- 919 (1074)
+.++........ . ++...++.||+||||||+.|. ++||.+ .+.++++.++ +..
T Consensus 206 ~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~--~~gv~~~~~~~~~l~~~~~~~ 283 (965)
T 2gag_A 206 FGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENND--RPGIMLAGAVRSYLNRYGVRA 283 (965)
T ss_dssp EEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCC--STTEEEHHHHHHHHHTTCEES
T ss_pred EeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCC--CCCEEEhHHHHHHHHhcCCCC
Confidence 777654321111 0 121247999999999999764 345542 3456665433 211
Q ss_pred -hH-------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEe--cCCeEEE
Q psy14927 920 -KK-------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASK--SGDNITV 983 (1074)
Q Consensus 920 -~~-------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~--~~~~~~v 983 (1074)
+. |..|.+.|.+||++++.+.++ + . .+.+++.||++++++.+.++.+ ++....|
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~-~----~-----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v 353 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS-A----A-----AAQAVADGVQVISGSVVVDTEADENGELSAI 353 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC-H----H-----HHHHHHTTCCEEETEEEEEEEECTTSCEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc-h----h-----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEE
Confidence 11 788889999999999988765 2 1 4678899999999999999987 3333356
Q ss_pred EEeeccC---CCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCC-----CCCCCEEEecccCCCCCc
Q psy14927 984 TIENVKD---PTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQ-----TVIPNIFAIGDCIHGPML 1055 (1074)
Q Consensus 984 ~~~~~~~---~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~-----ts~~~IyAiGD~~~~~~~ 1055 (1074)
++.+.+. +|+++++++|.|++++|++|+++++ .. .+|.|.+|++++ |+.|+|||+|||++.+.+
T Consensus 354 ~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~--~~------~~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~l 425 (965)
T 2gag_A 354 VVAELDEARELGGTQRFEADVLAVAGGFNPVVHLH--SQ------RQGKLDWDTTIHAFVPADAVANQHLAGAMTGRLDT 425 (965)
T ss_dssp EEEEECTTCCEEEEEEEECSEEEEECCEEECCHHH--HH------TTCCEEEETTTTEEEECSCCTTEEECGGGGTCCSH
T ss_pred EEEeccccCCCCceEEEEcCEEEECCCcCcChHHH--Hh------CCCcEEEcCcccccccCCCCCCEEEEEecCCchhH
Confidence 6553100 0334789999999999999999863 22 246788898877 899999999999987755
Q ss_pred HHHHHHHHHHHHHHhhC
Q psy14927 1056 AHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 1056 ~~~A~~~G~~aA~~I~~ 1072 (1074)
..|..+|+.||.+|++
T Consensus 426 -~~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 426 -ASALSTGAATGAAAAT 441 (965)
T ss_dssp -HHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 4899999999999974
No 83
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.85 E-value=3.3e-22 Score=249.77 Aligned_cols=251 Identities=17% Similarity=0.134 Sum_probs=173.1
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhh------CCeEEEee
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKS------NKVTQLNG 862 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~------~gV~~~~g 862 (1074)
+++|+||||||||++||..|++ ++||+.+..|+.+.+....++.... ..+..++...+.. .+|++..+
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~-~~~~~~~~~~i~~~~~~~~~~v~i~~~ 467 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEW-SYHRDYRETQITKLLKKNKESQLALGQ 467 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGGG-HHHHHHHHHHHHHHHHHSTTCEEECSC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHHH-HHHHHHHHHHHHHhhcccCCceEEEeC
Confidence 5669999999999999999998 8999988888877654433332211 1222222222222 25665544
Q ss_pred eEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCC----------CCCCCCCCCCcceechhhHhcchH-----------
Q psy14927 863 HGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEV----------TPFPGIEVDEETIVSSTGALSLKK----------- 921 (1074)
Q Consensus 863 ~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p----------~~ipgi~~~~~~v~t~~~~~~~~~----------- 921 (1074)
+ .++++++ .++.||+||||||+.| +++||.......+++..+++....
T Consensus 468 ~---------~v~~~~~--~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~ 536 (729)
T 1o94_A 468 K---------PMTADDV--LQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNA 536 (729)
T ss_dssp C---------CCCHHHH--HTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEEC
T ss_pred e---------EEehhhc--cccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcC
Confidence 2 2223333 3578999999999983 123443211346777777654221
Q ss_pred ---------hhHHhhcCCcEEEEecCCccCCC--CCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccC
Q psy14927 922 ---------GSVWGRLGAEVTAIEFMNAIGGM--GIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKD 990 (1074)
Q Consensus 922 ---------A~~l~~~G~~Vtlv~~~~~~~~~--~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~ 990 (1074)
|..|.+.|.+||++++.+ ++ + .++.. ...+.+.|++.||++++++.+++|.+ +++.++....++
T Consensus 537 GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~-~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~ 611 (729)
T 1o94_A 537 DTYFMAPSLAEKLATAGHEVTIVSGVH-LA-NYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDG 611 (729)
T ss_dssp CCSSHHHHHHHHHHHTTCEEEEEESSC-TT-HHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSC
T ss_pred CCCchHHHHHHHHHHcCCEEEEEeccc-cc-cccccccc-HHHHHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCc
Confidence 788889999999999988 54 2 12222 45677888999999999999999986 344443211000
Q ss_pred ---------------CCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCCCc
Q psy14927 991 ---------------PTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPML 1055 (1074)
Q Consensus 991 ---------------~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~~~ 1055 (1074)
.++..++++|.||+|+|++|+++++ ..++. .+|++++|++|+|||+|||+. +..
T Consensus 612 ~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~--~~l~~--------~vd~~~~t~~~~VyAiGD~~~-~~~ 680 (729)
T 1o94_A 612 SKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLW--NELKA--------RESEWAENDIKGIYLIGDAEA-PRL 680 (729)
T ss_dssp SCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHH--HHHHH--------TGGGTGGGTCCEEEECGGGTS-CCC
T ss_pred eEEecccccccccccCCcceeeeCCEEEECCCCCCChHHH--HHHhh--------hcccccccCCCCeEEEeCccc-hhh
Confidence 0123359999999999999999863 33321 267889999999999999987 557
Q ss_pred HHHHHHHHHHHHHHhhC
Q psy14927 1056 AHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 1056 ~~~A~~~G~~aA~~I~~ 1072 (1074)
+..|+.+|+.||.+|.+
T Consensus 681 ~~~A~~~G~~aA~~i~~ 697 (729)
T 1o94_A 681 IADATFTGHRVAREIEE 697 (729)
T ss_dssp HHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 88899999999999975
No 84
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.85 E-value=2.1e-18 Score=216.62 Aligned_cols=228 Identities=15% Similarity=0.163 Sum_probs=196.9
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhh---hcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhh
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLL---ENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLS 81 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~ 81 (1074)
-++++|+++||+.+|+|++.++ ++...++ ++|+++.++..+.++|.+|-++|++++..|++++|+.+|.+|+|+.+
T Consensus 1058 Iai~lglyEEAf~IYkKa~~~~-~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKAdD~sa 1136 (1630)
T 1xi4_A 1058 IAISNELFEEAFAIFRKFDVNT-SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSS 1136 (1630)
T ss_pred HHHhCCCHHHHHHHHHHcCCHH-HHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhcCChHH
Confidence 4688999999999999999888 5555554 69999999999999999999999999999999999999999977766
Q ss_pred hhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHHhCChH--------HHHHHHHHhCchHHHHHH
Q psy14927 82 MVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSCG--------NAVRLCKEQALDDQLWNL 153 (1074)
Q Consensus 82 ~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~--------~A~~la~~~~~~~~~~~l 153 (1074)
.++ +|..|++.|++++||+||.++.+.+ .|+.+|+. ++++++...
T Consensus 1137 y~e--------------------------Va~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl-~rleele~f 1189 (1630)
T 1xi4_A 1137 YME--------------------------VVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKT-NRLAELEEF 1189 (1630)
T ss_pred HHH--------------------------HHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhh-cCHHHHHHH
Confidence 555 8999999999999999999999887 88999998 778887776
Q ss_pred hhhcCchhHHHHHHHHcc-CChhHHHHHHHHhCChHHHHHHHHhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcch
Q psy14927 154 ALSAGPSEQIEAATYLET-IEPDKAVLLYHKAGALHKALDLAFKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRM 232 (1074)
Q Consensus 154 ~~~~~~~~~~~~A~~~e~-~~~~~A~~ly~kaG~~~kAl~l~~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~ 232 (1074)
........+..+|++|++ +++++|+.+|.+|+.+.++..++.+ .|+.+.+|+.+..+++
T Consensus 1190 I~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA~ny~rLA~tLvk--------------------Lge~q~AIEaarKA~n 1249 (1630)
T 1xi4_A 1190 INGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVH--------------------LGEYQAAVDGARKANS 1249 (1630)
T ss_pred HhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHHHHH--------------------hCCHHHHHHHHHHhCC
Confidence 655556778889999998 7899999999999988888888877 7889999999999999
Q ss_pred HHHH-------------HHHHHHHhcCCCCCChhHHHHHHHHHHccCCHHHHHHHHHHHHhHH
Q psy14927 233 KEIY-------------VMAANYLQSSDWKSQPELLKSIISFYSKGKAPHLLANFYVSCAQVE 282 (1074)
Q Consensus 233 ~~l~-------------~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~~~~aa~~~~~~a~~e 282 (1074)
.+.| .+|..+..+ ...+|+.+..++.+|.+.|.|++|.+.++..-..|
T Consensus 1250 ~~aWkev~~acve~~Ef~LA~~cgl~--Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~Le 1310 (1630)
T 1xi4_A 1250 TRTWKEVCFACVDGKEFRLAQMCGLH--IVVHADELEELINYYQDRGYFEELITMLEAALGLE 1310 (1630)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHh--hhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccC
Confidence 8884 345555543 46678999999999999999999999987775555
No 85
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.85 E-value=4.9e-21 Score=227.23 Aligned_cols=250 Identities=15% Similarity=0.087 Sum_probs=174.2
Q ss_pred hhhhhccccchHHHHHHHhh-----------hhhhhccccccccchhhh-----------------------------hh
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----------KLFTQAGDKGVKLNLETM-----------------------------MG 835 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----------~l~e~~~~~g~~~~~~~~-----------------------------~~ 835 (1074)
+|+||||||+|+++|..|++ ++||+.+..|+.+.+... +.
T Consensus 4 ~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~~ 83 (464)
T 2xve_A 4 RIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFAD 83 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBTT
T ss_pred cEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccCC
Confidence 49999999999999999986 266777666665432100 00
Q ss_pred h--h---------hHHHhhhhhhHHHHhhhCCeE--EEee-eEEEecC--C--eEEEEeCC---CCeeEEEcCeEEEccC
Q psy14927 836 T--K---------SAAVKALTGGIAHLFKSNKVT--QLNG-HGKITGP--N--TVTVIKSD---GSTEEVKTKNILIATG 894 (1074)
Q Consensus 836 ~--~---------~~~~~~l~~~~~~~l~~~gV~--~~~g-~v~~id~--~--~~~v~~~~---G~~~~i~~d~lIIATG 894 (1074)
. . ......+..++...+.+.|++ ++++ +|+.++. + .+.|++.+ |...++.||+||||||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG 163 (464)
T 2xve_A 84 YTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTG 163 (464)
T ss_dssp BCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCC
T ss_pred CCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCC
Confidence 0 0 001134455566777777887 7777 5777753 2 45666644 4335799999999999
Q ss_pred --CCCC--CCCCCCCCCcceechhhHhcchH------------------hhHHhhcCCcEEEEecCCccCCCCCCHHHHH
Q psy14927 895 --SEVT--PFPGIEVDEETIVSSTGALSLKK------------------GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAK 952 (1074)
Q Consensus 895 --~~p~--~ipgi~~~~~~v~t~~~~~~~~~------------------A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~ 952 (1074)
+.|. .+||++.....++++.++..... |..|.+.|++||++++++.++...+
T Consensus 164 ~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~~~------ 237 (464)
T 2xve_A 164 HFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGYKW------ 237 (464)
T ss_dssp SSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCCCC------
T ss_pred CCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCCCC------
Confidence 6663 34454322223555554443221 8888899999999999988763222
Q ss_pred HHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeee
Q psy14927 953 QFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPV 1032 (1074)
Q Consensus 953 ~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~V 1032 (1074)
..||+++ ..|+++++ ++ |.+.+ ++++++|.||+|||++|+++++. ..+|+.++++|+| +
T Consensus 238 -------~~~V~~~--~~V~~i~~--~~--V~~~d------G~~i~~D~Vi~atG~~p~~~~l~-~~~gl~~~~~~~v-~ 296 (464)
T 2xve_A 238 -------PENWDER--PNLVRVDT--EN--AYFAD------GSSEKVDAIILCTGYIHHFPFLN-DDLRLVTNNRLWP-L 296 (464)
T ss_dssp -------CTTEEEC--SCEEEECS--SE--EEETT------SCEEECSEEEECCCBCCCCTTBC-TTTCCCCCSSSCC-S
T ss_pred -------CCceEEc--CCeEEEeC--CE--EEECC------CCEEeCCEEEECCCCCCCCCCcC-cccccccCCCccc-c
Confidence 2478887 67888864 33 55554 34789999999999999999853 3468888777676 3
Q ss_pred C---CCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1033 N---SRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1033 d---~~~~ts~~~IyAiGD~~~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
+ ..++|+.|+||++||+...+ ....|..||+.+|.+|.|.
T Consensus 297 ~~~~~~~~t~~p~i~aiGd~~~~~-~~~~a~~qa~~~a~~l~G~ 339 (464)
T 2xve_A 297 NLYKGVVWEDNPKFFYIGMQDQWY-SFNMFDAQAWYARDVIMGR 339 (464)
T ss_dssp SEETTTEESSSTTEEECSCSCCSS-CHHHHHHHHHHHHHHHTTS
T ss_pred cccceEecCCCCCEEEEeCccccc-chHHHHHHHHHHHHHHcCC
Confidence 4 33568999999999988754 7899999999999999874
No 86
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.83 E-value=2e-21 Score=232.32 Aligned_cols=253 Identities=16% Similarity=0.099 Sum_probs=175.1
Q ss_pred chhhhhhccccchHHHHHHHhh----hhhhhccccccccchhhhh-hhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEe
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT----KLFTQAGDKGVKLNLETMM-GTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKIT 867 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~----~l~e~~~~~g~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~i 867 (1074)
+.+||||||||+|+++|++|++ +++|+.+..|+.+...... .+......++...+.+.+ ..||+++.+ +|+.+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQYLTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALGV 186 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTTCCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEEE
Confidence 4469999999999999999987 7888888777765432110 000001233444444555 679999887 46555
Q ss_pred cCC--eEEEEe-CCCCeeEEEcCeEEEccCCCCC--CCCCCCCCCcceechhhHhcchHhhHHhhcCCcEEEEecCCccC
Q psy14927 868 GPN--TVTVIK-SDGSTEEVKTKNILIATGSEVT--PFPGIEVDEETIVSSTGALSLKKGSVWGRLGAEVTAIEFMNAIG 942 (1074)
Q Consensus 868 d~~--~~~v~~-~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~~~v~t~~~~~~~~~A~~l~~~G~~Vtlv~~~~~~~ 942 (1074)
+.+ .+.+.. +++...++.||+||||||+.|. ++|+. +...+++..++..+.+... ...+.+|.++..+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~--~~~gv~~~~~~~~~~~~~~-~~~~~~vvViGgG~~-- 261 (493)
T 1y56_A 187 FDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFENN--DMPGVFRRDFALEVMNVWE-VAPGRKVAVTGSKAD-- 261 (493)
T ss_dssp EECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCCCTTT--TSTTEEEHHHHHHHHHTSC-BCSCSEEEEESTTHH--
T ss_pred EcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCCCCCC--CCCCEEEcHHHHHHHHhcc-cCCCCEEEEECCCHH--
Confidence 543 233333 4453347999999999999874 34444 2345777666543221100 123567777732211
Q ss_pred CCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCc
Q psy14927 943 GMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGI 1022 (1074)
Q Consensus 943 ~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl 1022 (1074)
.+.+.+++.||++++++.|.++.++++...+.+.+ +.++++|.||+++|.+|++++ +..+|+
T Consensus 262 ----------gle~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~------g~~i~aD~Vv~a~G~~p~~~l--~~~~g~ 323 (493)
T 1y56_A 262 ----------EVIQELERWGIDYVHIPNVKRVEGNEKVERVIDMN------NHEYKVDALIFADGRRPDINP--ITQAGG 323 (493)
T ss_dssp ----------HHHHHHHHHTCEEEECSSEEEEECSSSCCEEEETT------CCEEECSEEEECCCEEECCHH--HHHTTC
T ss_pred ----------HHHHHHHhCCcEEEeCCeeEEEecCCceEEEEeCC------CeEEEeCEEEECCCcCcCchH--HHhcCC
Confidence 12267788999999999999998765444454332 468999999999999999987 566666
Q ss_pred c--cCCCCCee-eCCCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHhhC
Q psy14927 1023 E--KDEKGRVP-VNSRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 1023 ~--ld~~G~I~-Vd~~~~ts~~~IyAiGD~~~~~~~~~~A~~~G~~aA~~I~~ 1072 (1074)
+ ++++|+|. ||++++ +.|+||++|||+..+ .+..|..+|++||.+|++
T Consensus 324 ~~~~~~~g~i~~vd~~~~-s~~~vya~GD~~~~~-~~~~A~~~g~~aa~~i~~ 374 (493)
T 1y56_A 324 KLRFRRGYYSPVLDEYHR-IKDGIYVAGSAVSIK-PHYANYLEGKLVGAYILK 374 (493)
T ss_dssp CEEEETTEEEECCCTTSE-EETTEEECSTTTCCC-CHHHHHHHHHHHHHHHHH
T ss_pred CccccCCceeeccccccC-cCCCEEEEeccCCcc-CHHHHHHHHHHHHHHHHH
Confidence 5 46789887 899999 999999999999865 788999999999999874
No 87
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.82 E-value=1.7e-20 Score=232.91 Aligned_cols=235 Identities=17% Similarity=0.220 Sum_probs=174.8
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEec
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITG 868 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id 868 (1074)
+++||||||||||++||..|++ +++|+.+..|+.+.+....+..... ..+..++...+.+.||+++.++.+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gv~~~~~~~v~~- 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEF-YETLRYYRRMIEVTGVTLKLNHTVTA- 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTH-HHHHHHHHHHHHHHTCEEEESCCCCS-
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHH-HHHHHHHHHHHHHcCCEEEeCcEecH-
Confidence 5569999999999999999998 8999988888887665554444332 34444567778888999999853211
Q ss_pred CCeEEEEeCCCCeeEE-EcCeEEEccCCCCC--CCCCCCCCCcceechhhHhcchH------------------hhHHhh
Q psy14927 869 PNTVTVIKSDGSTEEV-KTKNILIATGSEVT--PFPGIEVDEETIVSSTGALSLKK------------------GSVWGR 927 (1074)
Q Consensus 869 ~~~~~v~~~~G~~~~i-~~d~lIIATG~~p~--~ipgi~~~~~~v~t~~~~~~~~~------------------A~~l~~ 927 (1074)
..+ .||+||||||++|. ++||. +...+++..+++.... |..|.+
T Consensus 451 -------------~~~~~~d~lviAtG~~p~~~~i~G~--~~~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~ 515 (671)
T 1ps9_A 451 -------------DQLQAFDETILASGIVPRTPPIDGI--DHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQ 515 (671)
T ss_dssp -------------SSSCCSSEEEECCCEEECCCCCBTT--TSTTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTC
T ss_pred -------------HHhhcCCEEEEccCCCcCCCCCCCC--CCCcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHh
Confidence 124 79999999999874 33443 2245777777654321 667776
Q ss_pred cC-------------------------------------CcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCce
Q psy14927 928 LG-------------------------------------AEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTK 970 (1074)
Q Consensus 928 ~G-------------------------------------~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~ 970 (1074)
.| .+|+++++.+..+.+.+++.....+.+.|++.||++++++.
T Consensus 516 ~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~ 595 (671)
T 1ps9_A 516 PGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVS 595 (671)
T ss_dssp CSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCE
T ss_pred cCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcE
Confidence 66 35678877776665567777788888999999999999999
Q ss_pred EEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccC
Q psy14927 971 VTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCI 1050 (1074)
Q Consensus 971 v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~ 1050 (1074)
++++++ +++.++ . +|+.+++++|.||+++|++|+++++ ..+ + +..++||++|||+
T Consensus 596 v~~i~~--~~v~~~-~----~G~~~~i~~D~Vi~a~G~~p~~~l~--~~l----~------------~~g~~v~aiGD~~ 650 (671)
T 1ps9_A 596 YQKIDD--DGLHVV-I----NGETQVLAVDNVVICAGQEPNRALA--QPL----I------------DSGKTVHLIGGCD 650 (671)
T ss_dssp EEEEET--TEEEEE-E----TTEEEEECCSEEEECCCEEECCTTH--HHH----H------------TTTCCEEECGGGT
T ss_pred EEEEeC--CeEEEe-c----CCeEEEEeCCEEEECCCccccHHHH--HHH----H------------hcCCCEEEECCcC
Confidence 999985 444443 3 3555789999999999999999873 221 1 1236899999998
Q ss_pred CCC-CcHHHHHHHHHHHHHHh
Q psy14927 1051 HGP-MLAHKAEDEGIVCVEGI 1070 (1074)
Q Consensus 1051 ~~~-~~~~~A~~~G~~aA~~I 1070 (1074)
..+ ..+..|+.+|..+|.||
T Consensus 651 ~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 651 VAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp CCSSCCHHHHHHHHHHHHHHC
T ss_pred ccCchhHHHHHHHHHHHHHhC
Confidence 754 36899999999999986
No 88
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.82 E-value=6.7e-20 Score=217.94 Aligned_cols=271 Identities=10% Similarity=0.059 Sum_probs=173.8
Q ss_pred chhhhhhccccchHHHHHHHhh----------hhhhhcccccccc---------------------------chhhhhhh
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT----------KLFTQAGDKGVKL---------------------------NLETMMGT 836 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~----------~l~e~~~~~g~~~---------------------------~~~~~~~~ 836 (1074)
..+||||||||+|+++|..|++ +++|+.+..|... .+......
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~ 109 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHK 109 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhh
Confidence 3459999999999999999977 2555655433111 00000000
Q ss_pred hh------------HHHhhhhhhHHHHhhhCCeEEEee-eEEEecCC----e---EEEEeCCC--CeeEEEcCeEEEccC
Q psy14927 837 KS------------AAVKALTGGIAHLFKSNKVTQLNG-HGKITGPN----T---VTVIKSDG--STEEVKTKNILIATG 894 (1074)
Q Consensus 837 ~~------------~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id~~----~---~~v~~~~G--~~~~i~~d~lIIATG 894 (1074)
.. .....+..++.......+++++++ +|+.++.. . +.|++.+| ...++.||+||||||
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG 189 (463)
T 3s5w_A 110 HDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPG 189 (463)
T ss_dssp TTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCC
T ss_pred cCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCC
Confidence 00 001233344555566778999998 47777643 2 36666554 223799999999999
Q ss_pred CCCCCCCCCCCC-Cc-ceechhhH----hcch----H----------------hhHHhhc--CCcEEEEecCCccCCC--
Q psy14927 895 SEVTPFPGIEVD-EE-TIVSSTGA----LSLK----K----------------GSVWGRL--GAEVTAIEFMNAIGGM-- 944 (1074)
Q Consensus 895 ~~p~~ipgi~~~-~~-~v~t~~~~----~~~~----~----------------A~~l~~~--G~~Vtlv~~~~~~~~~-- 944 (1074)
+.|..+++++.. .. .++++.++ ..+. . |..|.+. |.+||+++|++.+++.
T Consensus 190 ~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~ 269 (463)
T 3s5w_A 190 GTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADD 269 (463)
T ss_dssp CEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCC
T ss_pred CCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccC
Confidence 987422223221 21 34433332 2221 1 7777777 8899999999987521
Q ss_pred -----------------CCCHHHHHHHHHHHHh--------------------------CCCEEEeCceEEEEEecCCeE
Q psy14927 945 -----------------GIDGEVAKQFQRILGK--------------------------QGMQFKLGTKVTGASKSGDNI 981 (1074)
Q Consensus 945 -----------------~~~~~~~~~~~~~l~~--------------------------~gV~i~~~~~v~~i~~~~~~~ 981 (1074)
.+++..+..+.+.+.. .||++++++.|+++..+++++
T Consensus 270 ~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~ 349 (463)
T 3s5w_A 270 SPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGI 349 (463)
T ss_dssp CHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEE
T ss_pred CccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEE
Confidence 1223333333333332 699999999999999888888
Q ss_pred EEEEeeccCCCCceEEEcCEEEEccCCccc--CCccCccccCcccCCCCCeeeCCCCCCC-----CCCEEEecccCC---
Q psy14927 982 TVTIENVKDPTKKEELSCDALLVCVGRRPY--THNLGLEEIGIEKDEKGRVPVNSRFQTV-----IPNIFAIGDCIH--- 1051 (1074)
Q Consensus 982 ~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~--~~~l~l~~~gl~ld~~G~I~Vd~~~~ts-----~~~IyAiGD~~~--- 1051 (1074)
.|++.+.. +|+..++++|.||+|||++|+ +++ +..++..+ |.|.||+++++. .|+||++|||..
T Consensus 350 ~v~~~~~~-~g~~~~~~~D~Vv~AtG~~p~~~~~~--l~~l~~~~---g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g 423 (463)
T 3s5w_A 350 ELALRDAG-SGELSVETYDAVILATGYERQLHRQL--LEPLAEYL---GDHEIGRDYRLQTDERCKVAIYAQGFSQASHG 423 (463)
T ss_dssp EEEEEETT-TCCEEEEEESEEEECCCEECCC-CTT--TGGGGGGB---C--CCCTTSBCCBCTTBCSEEEESSCCHHHHC
T ss_pred EEEEEEcC-CCCeEEEECCEEEEeeCCCCCCccch--hHHHHHHh---CCcccCcccccccCCCCCCeEEEcCCCcccCC
Confidence 88887643 465667999999999999999 555 34443333 789999998864 567999999975
Q ss_pred --CCCcHHHHHHHHHHHHHHh
Q psy14927 1052 --GPMLAHKAEDEGIVCVEGI 1070 (1074)
Q Consensus 1052 --~~~~~~~A~~~G~~aA~~I 1070 (1074)
.|.+...|.+++.+++..+
T Consensus 424 ~~~~~l~~~a~r~~~i~~~~~ 444 (463)
T 3s5w_A 424 LSDTLLSVLPVRAEEISGSLY 444 (463)
T ss_dssp TTTTSSTTHHHHHHHHHHHHH
T ss_pred cCccchhHHHHHHHHHHHHHH
Confidence 2557778888888876554
No 89
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.78 E-value=5.2e-19 Score=209.20 Aligned_cols=252 Identities=11% Similarity=0.020 Sum_probs=167.0
Q ss_pred hhhhhhccccchHHHHHHHhh-------hhhhhccccccccchhhhhh--------------------------------
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVKLNLETMMG-------------------------------- 835 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~~~~~~~~~-------------------------------- 835 (1074)
++|+||||||+|+++|..|++ ++||+.+..|+.+.......
T Consensus 7 ~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLYR 86 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCCT
T ss_pred CEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchhh
Confidence 459999999999999999987 68888776666543321000
Q ss_pred --------hhh--------------HHHhhhhhhHHHHhhhCCeEEEee-eEEEecC--CeEEEEeCC---CC-eeEEEc
Q psy14927 836 --------TKS--------------AAVKALTGGIAHLFKSNKVTQLNG-HGKITGP--NTVTVIKSD---GS-TEEVKT 886 (1074)
Q Consensus 836 --------~~~--------------~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id~--~~~~v~~~~---G~-~~~i~~ 886 (1074)
... .....+..++...+...++.++++ +|+.++. +.+.|++.+ |. ..++.|
T Consensus 87 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~ 166 (447)
T 2gv8_A 87 DLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIF 166 (447)
T ss_dssp TCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEE
T ss_pred hhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEe
Confidence 000 001233444555555667777777 5776653 446676654 63 337999
Q ss_pred CeEEEccCC--CCCCCCCCCCCC-------cceechhhHhcchH------------------hhHHhhcCCc-EEEEecC
Q psy14927 887 KNILIATGS--EVTPFPGIEVDE-------ETIVSSTGALSLKK------------------GSVWGRLGAE-VTAIEFM 938 (1074)
Q Consensus 887 d~lIIATG~--~p~~ipgi~~~~-------~~v~t~~~~~~~~~------------------A~~l~~~G~~-Vtlv~~~ 938 (1074)
|+||+|||. .| .+|.+++.. ..++++.++..... |..|.+.|.+ ||+++|+
T Consensus 167 d~VVvAtG~~s~p-~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~ 245 (447)
T 2gv8_A 167 DAVSICNGHYEVP-YIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLG 245 (447)
T ss_dssp SEEEECCCSSSSB-CBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred CEEEECCCCCCCC-CCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCC
Confidence 999999999 44 234443322 12555444332211 7888888998 9999988
Q ss_pred CccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccC--
Q psy14927 939 NAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLG-- 1016 (1074)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~-- 1016 (1074)
+.+ +...||.+ +..|+++.++++ .|.+.+ |+ .++++|.||+|||++|++++++
T Consensus 246 ~~~----------------l~~~~i~~--~~~v~~~~~~~~--~v~~~d----G~-~~~~~D~vi~atG~~~~~~~l~~~ 300 (447)
T 2gv8_A 246 GGD----------------IQNESLQQ--VPEITKFDPTTR--EIYLKG----GK-VLSNIDRVIYCTGYLYSVPFPSLA 300 (447)
T ss_dssp CCS----------------CBCSSEEE--ECCEEEEETTTT--EEEETT----TE-EECCCSEEEECCCBCCCCCCHHHH
T ss_pred CCc----------------CCCCCeEE--ecCeEEEecCCC--EEEECC----CC-EeccCCEEEECCCCCcCCCCCccc
Confidence 755 34567775 467888875443 455554 32 3479999999999999999821
Q ss_pred -ccccCcccCCCCCeeeCCCCC---CCCCCEEEecccCCCCCcHHHHHHHHHHHHHHhhCC
Q psy14927 1017 -LEEIGIEKDEKGRVPVNSRFQ---TVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAGD 1073 (1074)
Q Consensus 1017 -l~~~gl~ld~~G~I~Vd~~~~---ts~~~IyAiGD~~~~~~~~~~A~~~G~~aA~~I~~~ 1073 (1074)
+..++..+..++.+.++.+.+ ++.|+||++||+...+ ....|..||+.+|.+|.|.
T Consensus 301 ~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~-~~~~a~~qa~~~a~~~~g~ 360 (447)
T 2gv8_A 301 KLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVV-PFPTSQAQAAFLARVWSGR 360 (447)
T ss_dssp SCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBSSC-HHHHHHHHHHHHHHHHTTS
T ss_pred ccccccCceecCCCcccccccccccCCCCcEEEEecccccc-CchHHHHHHHHHHHHHcCC
Confidence 222222222345566665555 7899999999998765 7889999999999999874
No 90
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.72 E-value=7e-16 Score=194.01 Aligned_cols=252 Identities=16% Similarity=0.231 Sum_probs=192.0
Q ss_pred HhhhcCCHHHHHHHHHHcCcccc---------------hhhhHh-----------------h-----hcHHHHHHHhhcC
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQ---------------HVPRML-----------------L-----ENTDKLEKYIIQS 47 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~---------------~~~~~~-----------------~-----~~~~~~~~~~~~~ 47 (1074)
-+++.|+++||+..|++++.++. +++++| + +++..++.|+...
T Consensus 1114 Aql~~G~~kEAIdsYiKAdD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~ 1193 (1630)
T 1xi4_A 1114 AQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGP 1193 (1630)
T ss_pred HHHhCCCHHHHHHHHHhcCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCC
Confidence 35677888888888888776665 455544 1 4567889998777
Q ss_pred CChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHH------------HHHHHHH
Q psy14927 48 KDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAA------------YHLARQY 115 (1074)
Q Consensus 48 ~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~------------~~la~~~ 115 (1074)
+.+.+. .||+++++.|+|++|..+|.++++|.+++++|+++|++++|.+.++++++..+. +++|+.|
T Consensus 1194 n~ad~~-~iGd~le~eg~YeeA~~~Y~kA~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~c 1272 (1630)
T 1xi4_A 1194 NNAHIQ-QVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMC 1272 (1630)
T ss_pred CHHHHH-HHHHHHHhcCCHHHHHHHHHhhhHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHH
Confidence 766666 599999999999999999999999999999999999999999999999888773 4677776
Q ss_pred H-----hcCChHHHHHHHHHhCChHHHHHHHHHh--------CchHHHHHHhhhcCchhHHHHHHHHcc-CC--------
Q psy14927 116 E-----NSGQFDEAIHFYSVAGSCGNAVRLCKEQ--------ALDDQLWNLALSAGPSEQIEAATYLET-IE-------- 173 (1074)
Q Consensus 116 ~-----~~g~~~~Ai~~y~~a~~~~~A~~la~~~--------~~~~~~~~l~~~~~~~~~~~~A~~~e~-~~-------- 173 (1074)
. ..+.+++++.+|...|.|++||++++.- ++++++..+.....|+.+.+..++|++ .+
T Consensus 1273 gl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaKy~peklmEhlk~f~~rini~k~~r~~ 1352 (1630)
T 1xi4_A 1273 GLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAA 1352 (1630)
T ss_pred HHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHhCCHHHHHHHHHHHHHhcccchHhHHH
Confidence 6 3446789999999999999999999433 288888888888999999999999988 56
Q ss_pred -----hhHHHHHHHHhCChHHHHHHHHhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcCCC
Q psy14927 174 -----PDKAVLLYHKAGALHKALDLAFKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSSDW 248 (1074)
Q Consensus 174 -----~~~A~~ly~kaG~~~kAl~l~~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~~~ 248 (1074)
+.+++.||++.|++.+|+...++.... +| +.+..........+.+||.+|++|+...
T Consensus 1353 e~~~lW~elv~LY~~~~e~dnA~~tm~~h~~~----a~------------~~~~Fk~~i~kv~n~elyykai~Fyl~~-- 1414 (1630)
T 1xi4_A 1353 EQAHLWAELVFLYDKYEEYDNAIITMMNHPTD----AW------------KEGQFKDIITKVANVELYYRAIQFYLEF-- 1414 (1630)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHhccHh----hh------------hhHHHHHHhcccccHHHHHHHHHHHHhh--
Confidence 789999999999999999666653200 00 0011122334456789999999998754
Q ss_pred CCChh-------------HHHHHHHHHHccCCHHHHHHHHHH
Q psy14927 249 KSQPE-------------LLKSIISFYSKGKAPHLLANFYVS 277 (1074)
Q Consensus 249 ~~~~~-------------~~~~i~~~Y~k~~~~~~aa~~~~~ 277 (1074)
.|. +..+.++++.|.+..--+-.|...
T Consensus 1415 --~P~~lndLl~~l~~rlD~~R~V~l~~~~~~l~lik~yl~~ 1454 (1630)
T 1xi4_A 1415 --KPLLLNDLLMVLSPRLDHTRAVNYFSKVKQLPLVKPYLRS 1454 (1630)
T ss_pred --ChHHHHHHHHHhhhcCChHHHHHHHHHcCChHHhHHHHHH
Confidence 122 345667777766665554444443
No 91
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.65 E-value=2.5e-16 Score=189.66 Aligned_cols=266 Identities=13% Similarity=0.088 Sum_probs=165.3
Q ss_pred chhhhhhccccchHHHHHHHh-h-----hhhhhccccccccchhhhhhh-------------------------hhHHHh
Q psy14927 794 RQVVLNTLGNCAAVQANYHLA-T-----KLFTQAGDKGVKLNLETMMGT-------------------------KSAAVK 842 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la-~-----~l~e~~~~~g~~~~~~~~~~~-------------------------~~~~~~ 842 (1074)
+.+|||||||++|+.+|..|+ + +++|+.+..|+.+.....+.. ......
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 345999999999999999999 5 899998877765433211110 000123
Q ss_pred hhhhhHHHHhhhCCe--EEEee-eEEEecC----CeEEEEeCCCCeeEEEcCeEEEccCC--CC--CCCCCCCCCCccee
Q psy14927 843 ALTGGIAHLFKSNKV--TQLNG-HGKITGP----NTVTVIKSDGSTEEVKTKNILIATGS--EV--TPFPGIEVDEETIV 911 (1074)
Q Consensus 843 ~l~~~~~~~l~~~gV--~~~~g-~v~~id~----~~~~v~~~~G~~~~i~~d~lIIATG~--~p--~~ipgi~~~~~~v~ 911 (1074)
++..++...+.+.|+ +++++ +|+.++. ..+.|++.+| .++.||+||+|||. .| +++||++.....++
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G--~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~ 165 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG--EVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETI 165 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS--CEEEEEEEEECCCSCCSBCCCCCTTGGGCCSEEE
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC--CEEEeCEEEECCcccccCCCCCCCCccccCCCEE
Confidence 455566777778888 78877 5666642 3668888888 57999999999994 55 24555432222333
Q ss_pred chhhHhc---c-hH--------------hhHHhhcCCcEEEEecCCccCCCCCC----HHHHHHHH--------------
Q psy14927 912 SSTGALS---L-KK--------------GSVWGRLGAEVTAIEFMNAIGGMGID----GEVAKQFQ-------------- 955 (1074)
Q Consensus 912 t~~~~~~---~-~~--------------A~~l~~~G~~Vtlv~~~~~~~~~~~~----~~~~~~~~-------------- 955 (1074)
++..... . .+ |..|.+.|.+||+++|++....|..+ +.....+.
T Consensus 166 ~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 245 (540)
T 3gwf_A 166 HTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSA 245 (540)
T ss_dssp EGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTSS
T ss_pred EeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHHhcc
Confidence 2222111 1 11 77788889999999999883223333 22222211
Q ss_pred -----------------------------------------------------------H--------------------
Q psy14927 956 -----------------------------------------------------------R-------------------- 956 (1074)
Q Consensus 956 -----------------------------------------------------------~-------------------- 956 (1074)
+
T Consensus 246 ~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~~~ 325 (540)
T 3gwf_A 246 VAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPKGL 325 (540)
T ss_dssp SCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCCSC
T ss_pred ccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCC
Confidence 0
Q ss_pred -------------HHHhCCCEEEe--CceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccC---cc
Q psy14927 957 -------------ILGKQGMQFKL--GTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLG---LE 1018 (1074)
Q Consensus 957 -------------~l~~~gV~i~~--~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~---l~ 1018 (1074)
.+.+.+|+++. +..|++|+++ + |.+.+ ++++++|.||+|||+.+++.++. +.
T Consensus 326 g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~--g--v~~~d------G~~~~~DvIV~ATGf~~~~~~~~~~~i~ 395 (540)
T 3gwf_A 326 FAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAK--G--VVTED------GVLHELDVLVFATGFDAVDGNYRRIEIR 395 (540)
T ss_dssp CCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSS--E--EEETT------CCEEECSEEEECCCBSCSSHHHHTSEEE
T ss_pred CccccCCCccHHHHhcCCCEEEEeCCCCCccEEecC--e--EEcCC------CCEEECCEEEECCccCccccCcCcceEE
Confidence 01145888885 6789999873 3 54444 56899999999999999874321 11
Q ss_pred -ccCcccCC--CCCeeeCCCCC-CCCCCEEEe-cccCCCCCcHHHHHHHHHHHHHHhh
Q psy14927 1019 -EIGIEKDE--KGRVPVNSRFQ-TVIPNIFAI-GDCIHGPMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1019 -~~gl~ld~--~G~I~Vd~~~~-ts~~~IyAi-GD~~~~~~~~~~A~~~G~~aA~~I~ 1071 (1074)
.-|+.+++ .+.+.+...+. .+.||+|.+ |..+........+..|+..+++.|.
T Consensus 396 g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~~i~ 453 (540)
T 3gwf_A 396 GRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEWISDTIG 453 (540)
T ss_dssp CGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHHHHHHHHHHHH
Confidence 11222221 01122222222 489999999 8765544456777888888877653
No 92
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.64 E-value=2.9e-16 Score=187.85 Aligned_cols=158 Identities=36% Similarity=0.524 Sum_probs=139.9
Q ss_pred HHhhhhhccccccccccCCceEEeccch--------hhccHHHHhccccccccccccccccccccccCCcceEEEEeccC
Q psy14927 368 EVDKYLEMKRNQSFRSSNTDIILPVEKW--------TLLSLARVLEGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKL 439 (1074)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (1074)
++++.+.+..++.+||+..+||+.||.. +-.....|...+......+++..+|.++..+++.+.|++++.+
T Consensus 313 ~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~p~~a~vGlte~~- 391 (491)
T 3urh_A 313 VLDSRGRVEIDRHFQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASVGKTEEE- 391 (491)
T ss_dssp CBCTTSCBCCCTTCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTSCCCCCTTCCCEEECSSSCEEEEECCHHH-
T ss_pred eECCCCCEeECCCCCCCCCCEEEEEecCCCccchhHHHHHHHHHHHHHcCCCcccCCCCCCEEEEccCCeEEEeCCHHH-
Confidence 3566777999999999999999999984 1222233356666655667888999999999999999999877
Q ss_pred CCcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHHH
Q psy14927 440 TDKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDV 519 (1074)
Q Consensus 440 ~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~l 519 (1074)
+++.|+++.+.+++|..++|+..++++.||+|++++++||+|||+|++|++++|+|+.+++||+.+.|+++|
T Consensus 392 --------a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l 463 (491)
T 3urh_A 392 --------LKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDL 463 (491)
T ss_dssp --------HHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHH
T ss_pred --------HHhCCCCEEEEEEecCcchhhhcCCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHH
Confidence 888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCccccccc
Q psy14927 520 ARTCHAHPTVCVEKN 534 (1074)
Q Consensus 520 ~~~~~~hPt~s~e~~ 534 (1074)
.+++|+|||+++.+.
T Consensus 464 ~~~~~~hPt~~e~~~ 478 (491)
T 3urh_A 464 GRTCHAHPTMSEAVK 478 (491)
T ss_dssp HTSCCCSSCTTHHHH
T ss_pred hcCccCCCChHHHHH
Confidence 999999999998763
No 93
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.62 E-value=3.7e-16 Score=186.31 Aligned_cols=157 Identities=31% Similarity=0.407 Sum_probs=138.1
Q ss_pred HhhhhhccccccccccCCceEEeccchh-----h---ccHHHHhccccccccccccccccccccccCCcceEEEEeccCC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWT-----L---LSLARVLEGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLT 440 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1074)
+++.+.+..|+.+||+..+||..||..- . .....|..++......+++..+|..+..+++.+.|++++.+
T Consensus 294 ~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vGlte~~-- 371 (476)
T 3lad_A 294 LDERGFIYVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHKAQMNYDLIPAVIYTHPEIAGVGKTEQA-- 371 (476)
T ss_dssp BCTTSCBCCCTTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHCCCCCCTTCCCEEECSSSEEEEEECCHHH--
T ss_pred ccCCCCEeeCCCcccCCCCEEEEEccCCCcccHHHHHHHHHHHHHHhcCCCcccCCCCCCEEEECcCCEEEeeCCHHH--
Confidence 4566778889999999999999999841 1 22223355565555567888999999999999999999877
Q ss_pred CcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHHHh
Q psy14927 441 DKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVA 520 (1074)
Q Consensus 441 ~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~l~ 520 (1074)
++..|+++.+.+++|..++|+..++++.||+|++++++|++|||+|++|++++|+|+.+++||+.+.|+++|.
T Consensus 372 -------a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~ 444 (476)
T 3lad_A 372 -------LKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLG 444 (476)
T ss_dssp -------HHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHH
T ss_pred -------HHhcCCCEEEEEEeccccchheecCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHh
Confidence 7888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCccccccc
Q psy14927 521 RTCHAHPTVCVEKN 534 (1074)
Q Consensus 521 ~~~~~hPt~s~e~~ 534 (1074)
+++|+|||+++.+.
T Consensus 445 ~~~~~hPt~~e~~~ 458 (476)
T 3lad_A 445 MMVFAHPALSEALH 458 (476)
T ss_dssp TSCCCSSCSHHHHH
T ss_pred cCccCCCChHHHHH
Confidence 99999999998763
No 94
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.62 E-value=6.8e-16 Score=183.24 Aligned_cols=160 Identities=18% Similarity=0.140 Sum_probs=137.4
Q ss_pred HhhhhhccccccccccCCceEEeccchhh--------ccHHHHhcccccc-ccccccccccccccccCCcceEEEEeccC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL--------LSLARVLEGIEYK-VGKFPFAANSRAKTNNDTDGFVKVLGDKL 439 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (1074)
+++.+.+..|+.+||+..+||..||..-+ .....|..++... ...+++..+|.++..+++.+.+++++.+
T Consensus 282 ~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vG~te~~- 360 (463)
T 4dna_A 282 TNELGAIIVDAFSRTSTPGIYALGDVTDRVQLTPVAIHEAMCFIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEE- 360 (463)
T ss_dssp BCTTSCBCCCTTCBCSSTTEEECSGGGSSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSCCCEEECSSSCEEEEECCHHH-
T ss_pred ECCCCCEeECcCCCCCCCCEEEEEecCCCCCChHHHHHHHHHHHHHHcCCCCcccCCCCCCEEEECCCCeEEecCCHHH-
Confidence 56677788999999999999999998331 1122224444432 2335778899999999999999999887
Q ss_pred CCcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHHH
Q psy14927 440 TDKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDV 519 (1074)
Q Consensus 440 ~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~l 519 (1074)
+++.|.++.+.+.+|..++|+...+.+.||+|+++|++|++|||+|++|++++|+|+.+++||+.+.|+++|
T Consensus 361 --------a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l 432 (463)
T 4dna_A 361 --------AARKFQEIEVYRAEFRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDF 432 (463)
T ss_dssp --------HHHHSSEEEEEEEEECCTTHHHHCCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHH
T ss_pred --------HHHcCCCeEEEEEeccccchhhcCCCceEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHH
Confidence 777888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCcccccccccc
Q psy14927 520 ARTCHAHPTVCVEKNDTL 537 (1074)
Q Consensus 520 ~~~~~~hPt~s~e~~~~~ 537 (1074)
.+++|+|||++|.+....
T Consensus 433 ~~~~~~hPt~~e~~~~~~ 450 (463)
T 4dna_A 433 DRTMAVHPTAAEELVTMY 450 (463)
T ss_dssp HTSCCCTTCSGGGGTCCC
T ss_pred hhcccCCCCHHHHHHHHh
Confidence 999999999999885443
No 95
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.60 E-value=2.6e-15 Score=154.18 Aligned_cols=138 Identities=17% Similarity=0.245 Sum_probs=116.6
Q ss_pred hhHHhhcCCcEEEEecCCccCC--------CCC-----CHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeec
Q psy14927 922 GSVWGRLGAEVTAIEFMNAIGG--------MGI-----DGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENV 988 (1074)
Q Consensus 922 A~~l~~~G~~Vtlv~~~~~~~~--------~~~-----~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~ 988 (1074)
|..|.+.|.+|+++++.+.++. +.+ ++++.+.+.+.+++.||+++.+ ++++++.+++++.+++.+
T Consensus 17 A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~- 94 (180)
T 2ywl_A 17 ALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEE- 94 (180)
T ss_dssp HHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSS-
T ss_pred HHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECC-
Confidence 6677889999999999876552 123 4788888999999999999999 999998866665565433
Q ss_pred cCCCCceEEEcCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCCCCC-cHHHHHHHHHHHH
Q psy14927 989 KDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIHGPM-LAHKAEDEGIVCV 1067 (1074)
Q Consensus 989 ~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~~~~-~~~~A~~~G~~aA 1067 (1074)
+ ++++|.||+|+|..|+. ...+|++++ +|+|.||++++|+.|+|||+|||+..+. ++..|..+|+.||
T Consensus 95 -----g-~i~ad~vI~A~G~~~~~----~~~~g~~~~-~g~i~vd~~~~t~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa 163 (180)
T 2ywl_A 95 -----G-VEKAERLLLCTHKDPTL----PSLLGLTRR-GAYIDTDEGGRTSYPRVYAAGVARGKVPGHAIISAGDGAYVA 163 (180)
T ss_dssp -----C-EEEEEEEEECCTTCCHH----HHHHTCCEE-TTEECCCTTCBCSSTTEEECGGGGTCCSCCHHHHHHHHHHHH
T ss_pred -----C-EEEECEEEECCCCCCCc----cccCCCCcc-CceEEeCCCCCcCCCCEEEeecccCcchhhHHHHHHhHHHHH
Confidence 3 79999999999999963 356788888 8999999999999999999999999766 8999999999999
Q ss_pred HHhhC
Q psy14927 1068 EGIAG 1072 (1074)
Q Consensus 1068 ~~I~~ 1072 (1074)
.||.+
T Consensus 164 ~~i~~ 168 (180)
T 2ywl_A 164 VHLVS 168 (180)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99974
No 96
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.59 E-value=1.9e-15 Score=180.39 Aligned_cols=161 Identities=13% Similarity=0.140 Sum_probs=138.0
Q ss_pred HHhhhhhccccccccccCCceEEeccchhh-----ccHHH---Hhcccccc-ccccccccccccccccCCcceEEEEecc
Q psy14927 368 EVDKYLEMKRNQSFRSSNTDIILPVEKWTL-----LSLAR---VLEGIEYK-VGKFPFAANSRAKTNNDTDGFVKVLGDK 438 (1074)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1074)
++++.+.+..+..+||+..+||+.||..-+ ....| |..++... ...+++..+|.+++.+++.+.|++++..
T Consensus 301 ~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~ 380 (484)
T 3o0h_A 301 KVNEFGAVVVDEKMTTNVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFENTSTTPDYDLITTAVFSQPEIGTVGLSEED 380 (484)
T ss_dssp CBCTTSCBCCCTTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHC---CCCCCTTCCEEECCSSCEEEEECCHHH
T ss_pred eECCCCCEeECCCCCCCCCCEEEEEecCCCCcCHHHHHHHHHHHHHHHcCCCCCcCCCCCCcEEEECCCCEEEeeCCHHH
Confidence 356777789999999999999999998431 11222 24444432 2345778899999999999999999888
Q ss_pred CCCcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHH
Q psy14927 439 LTDKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCED 518 (1074)
Q Consensus 439 ~~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~ 518 (1074)
+++.|.++.+.+.+|..++|+...+.+.||+|+++|++|++|||+|++|++++|+|+.+++||+.++|+.+
T Consensus 381 ---------a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~ 451 (484)
T 3o0h_A 381 ---------ALHRYKRVEIYRTVFRPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDI 451 (484)
T ss_dssp ---------HHHHCSEEEEEEEEECCHHHHHHTCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHH
T ss_pred ---------HHHcCCCEEEEEecCCcchhhccCCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHH
Confidence 77788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccCCcccccccccc
Q psy14927 519 VARTCHAHPTVCVEKNDTL 537 (1074)
Q Consensus 519 l~~~~~~hPt~s~e~~~~~ 537 (1074)
|.+++|+|||++|.+....
T Consensus 452 l~~~~~~hPt~~e~~~~~~ 470 (484)
T 3o0h_A 452 FDKTMAVHPTMSEELVTMY 470 (484)
T ss_dssp HHHSCCCSSCSGGGGGCCC
T ss_pred HhccccCCCChHHHHHHHh
Confidence 9999999999999885544
No 97
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.59 E-value=2.3e-15 Score=181.47 Aligned_cols=146 Identities=12% Similarity=0.027 Sum_probs=95.5
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhh-------------------------hhHHHhh
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGT-------------------------KSAAVKA 843 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~-------------------------~~~~~~~ 843 (1074)
+.+|||||||++|+.+|..|++ +++|+.+..|+.+.+..++.. ......+
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~e 88 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPE 88 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHH
Confidence 3459999999999999999998 899998877776533222200 0001234
Q ss_pred hhhhHHHHhhhCCe--EEEee-eEEEecC----CeEEEEeCCCCeeEEEcCeEEEccC--CCC--CCCCCCCCCCccee-
Q psy14927 844 LTGGIAHLFKSNKV--TQLNG-HGKITGP----NTVTVIKSDGSTEEVKTKNILIATG--SEV--TPFPGIEVDEETIV- 911 (1074)
Q Consensus 844 l~~~~~~~l~~~gV--~~~~g-~v~~id~----~~~~v~~~~G~~~~i~~d~lIIATG--~~p--~~ipgi~~~~~~v~- 911 (1074)
+..++.....+.|+ .+.++ +|+.++. ..+.|++.+| .++.||+||+||| +.| +.+||++......+
T Consensus 89 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~h 166 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE--EVVTCRFLISATGPLSASRMPDIKGIDSFKGESFH 166 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTT--EEEEEEEEEECCCSCBC---CCCTTGGGCCSEEEE
T ss_pred HHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCC--CEEEeCEEEECcCCCCCCcCCCCCCccccCCCeEE
Confidence 55556666677776 67776 5666642 3568888888 6899999999999 666 34555543222233
Q ss_pred chhhHhc---------ch-H--------------hhHHhhcCCcEEEEecCCcc
Q psy14927 912 SSTGALS---------LK-K--------------GSVWGRLGAEVTAIEFMNAI 941 (1074)
Q Consensus 912 t~~~~~~---------~~-~--------------A~~l~~~G~~Vtlv~~~~~~ 941 (1074)
+...... .. + |..|.+.+.+||++.|++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 167 SSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp GGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred cccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 2221111 11 1 77778889999999999874
No 98
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.59 E-value=1.6e-15 Score=180.16 Aligned_cols=155 Identities=17% Similarity=0.242 Sum_probs=135.1
Q ss_pred HhhhhhccccccccccCCceEEeccchhh-----ccHHH---Hhcccccc---ccccccccccccccccCCcceEEEEec
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL-----LSLAR---VLEGIEYK---VGKFPFAANSRAKTNNDTDGFVKVLGD 437 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (1074)
+++.+ +..|+.+||+..+||..||..-+ ....| |..++... ...+++..+|..+..+++.+.+++++.
T Consensus 285 ~~~~G-i~vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~a~vG~te~ 363 (466)
T 3l8k_A 285 ISKTG-IVVDETMKTNIPNVFATGDANGLAPYYHAAVRMSIAAANNIMANGMPVDYVDVKSIPVTIYTIPSLSYVGILPS 363 (466)
T ss_dssp BCSSS-BCCCTTCBCSSTTEEECGGGTCSCCSHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCEEECSSSCEEEEECCHH
T ss_pred eCCCC-EeECCCccCCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHhCCCCCccccCCCCCcEEEECCCCeEEecCCHH
Confidence 56778 89999999999999999998432 12222 24444432 234678889999999999999999987
Q ss_pred cCCCcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHH
Q psy14927 438 KLTDKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCE 517 (1074)
Q Consensus 438 ~~~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~ 517 (1074)
. +++.|+++++.+.++.+++|+...+++.||+|++++++||+|||+|++|++++|+|+.+++||+.+.|++
T Consensus 364 ~---------a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~ 434 (466)
T 3l8k_A 364 K---------ARKMGIEIVEAEYNMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAK 434 (466)
T ss_dssp H---------HHHHTCCEEEEEEEGGGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHH
T ss_pred H---------HHhCCCCEEEEEEEcccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHH
Confidence 7 7778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccCCcccccc
Q psy14927 518 DVARTCHAHPTVCVEK 533 (1074)
Q Consensus 518 ~l~~~~~~hPt~s~e~ 533 (1074)
+|.+++++|||+++.+
T Consensus 435 ~l~~~~~~~Pt~~e~~ 450 (466)
T 3l8k_A 435 QLASFAEQHPSTNEII 450 (466)
T ss_dssp HHHHCCCCTTSTTHHH
T ss_pred HHhccccCCCChHHHH
Confidence 9999999999999776
No 99
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.58 E-value=2.1e-15 Score=179.72 Aligned_cols=157 Identities=19% Similarity=0.182 Sum_probs=133.8
Q ss_pred HhhhhhccccccccccCCceEEeccch-----hhccHHH---Hhcccccc--ccccccccccccccccCCcceEEEEecc
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKW-----TLLSLAR---VLEGIEYK--VGKFPFAANSRAKTNNDTDGFVKVLGDK 438 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1074)
+++.+.++.|+.+||+..+||..||.. +.....| |..++... ....++..+|..++.+++.+.|++++.+
T Consensus 307 ~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~ 386 (478)
T 3dk9_A 307 TDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDE 386 (478)
T ss_dssp BCTTCCBCCCTTCBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCEEECCSSCEEEEECCHHH
T ss_pred eCCCCCEeeCCCcccCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEeeCCHHH
Confidence 466777899999999999999999984 1122222 24444433 2346778899999999999999999887
Q ss_pred CCCcccccccccCC--CcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCH
Q psy14927 439 LTDKVLGVHIIGPG--IEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASC 516 (1074)
Q Consensus 439 ~~~~~lg~~~~~~g--~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~ 516 (1074)
+++.| .++.+.+.+|..+++++..+.+.||+|++++++|++|||+|++|++++|+|+.+++||+.+.|+
T Consensus 387 ---------a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~ 457 (478)
T 3dk9_A 387 ---------AIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATK 457 (478)
T ss_dssp ---------HHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBH
T ss_pred ---------HHhhCCCccEEEEEeecCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCH
Confidence 66654 5688888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCccccccc
Q psy14927 517 EDVARTCHAHPTVCVEKN 534 (1074)
Q Consensus 517 ~~l~~~~~~hPt~s~e~~ 534 (1074)
++|.+++|+|||++|.+.
T Consensus 458 ~~l~~~~~~hPt~~e~~~ 475 (478)
T 3dk9_A 458 ADFDNTVAIHPTSSEELV 475 (478)
T ss_dssp HHHHTSCCCSSSSGGGGG
T ss_pred HHHhhcccCCCChHHHHH
Confidence 999999999999998863
No 100
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.55 E-value=6.5e-15 Score=175.65 Aligned_cols=156 Identities=22% Similarity=0.281 Sum_probs=135.1
Q ss_pred HhhhhhccccccccccCCceEEeccchhh-----ccHHH---HhccccccccccccccccccccccCCcceEEEEeccCC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL-----LSLAR---VLEGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLT 440 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1074)
+++.+.++.|+++|||..+||..||..-+ ....| |..++......+++..+|..+..+++.+.+++++..
T Consensus 300 ~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~te~~-- 377 (482)
T 1ojt_A 300 VTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELS-- 377 (482)
T ss_dssp CCTTSCCCCCTTSBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCCCCCCCCCCCEEECSSSCEEEEECCHHH--
T ss_pred eCCCCCEeeCCCcccCCCCEEEEEcccCCCccHHHHHHHHHHHHHHHcCCCccCCCCCCCEEEEcCCCeEEEeCCHHH--
Confidence 45567788999999999999999998432 11222 245555444456778889999999999999998877
Q ss_pred CcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHHHh
Q psy14927 441 DKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVA 520 (1074)
Q Consensus 441 ~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~l~ 520 (1074)
++..|+++.+..+++..++|+...+++.||+|+++++++|+|||+|++|++++|+|+.+++||+.+.|+++|.
T Consensus 378 -------a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~ 450 (482)
T 1ojt_A 378 -------AKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIG 450 (482)
T ss_dssp -------HHHHTCCEEEEEEEGGGCHHHHHTTCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHH
T ss_pred -------HHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHh
Confidence 7777889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCcccccc
Q psy14927 521 RTCHAHPTVCVEK 533 (1074)
Q Consensus 521 ~~~~~hPt~s~e~ 533 (1074)
+++|+|||+++.+
T Consensus 451 ~~~~~~Pt~~e~~ 463 (482)
T 1ojt_A 451 KTIHPHPTLGESI 463 (482)
T ss_dssp TSCCCSSSSTTHH
T ss_pred cCccCCCCHHHHH
Confidence 9999999999765
No 101
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.54 E-value=4.4e-15 Score=177.41 Aligned_cols=156 Identities=16% Similarity=0.156 Sum_probs=131.7
Q ss_pred Hhhhhhcccc-ccccccCCceEEeccchhhc--------cHHHHhccccc--cccccccccccccccccCCcceEEEEec
Q psy14927 369 VDKYLEMKRN-QSFRSSNTDIILPVEKWTLL--------SLARVLEGIEY--KVGKFPFAANSRAKTNNDTDGFVKVLGD 437 (1074)
Q Consensus 369 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (1074)
+++.+.+..+ ..+||++.+||..||..-+. ....|..++.. ....+++..+|..+..+++.+.+++++.
T Consensus 288 ~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~ 367 (492)
T 3ic9_A 288 LDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGKVAGTNAGAYPVIAQGQRRAPLSVVFTEPQVASVGLSLR 367 (492)
T ss_dssp BCTTCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHHHHHHHHHHHHHHHHTTSCCEECCCCCEEEECSSSEEEEEESCHH
T ss_pred ECCCCCEeECcccccCCCCCEEEEEecCCCCccHHHHHHHHHHHHHHHcCCCCCcccCCCCCcEEEECCCCeEEecCCHH
Confidence 4566777888 89999999999999984321 12222444432 1224566778899999999999999987
Q ss_pred cCCCcccccccccC-----CCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHc
Q psy14927 438 KLTDKVLGVHIIGP-----GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEY 512 (1074)
Q Consensus 438 ~~~~~~lg~~~~~~-----g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~ 512 (1074)
+ +++. |+++.+.+.+|..++|+...+.+.||+|++++++||+|||+|++|++++|+|+.+++||+.
T Consensus 368 ~---------a~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~ 438 (492)
T 3ic9_A 368 Q---------IEDLYADQDAANYVVGQVSFEGQGRSRVMGKNKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQ 438 (492)
T ss_dssp H---------HHHHCSCSSSCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHT
T ss_pred H---------HHhccCccCCccEEEEEEEeccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHC
Confidence 7 5555 4789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCcccccc
Q psy14927 513 GASCEDVARTCHAHPTVCVEK 533 (1074)
Q Consensus 513 ~~~~~~l~~~~~~hPt~s~e~ 533 (1074)
+.|+++|.+++|+|||++|.+
T Consensus 439 ~~t~~~l~~~~~~hPt~~e~~ 459 (492)
T 3ic9_A 439 QMTVQAMLTMPFYHPVIEEGL 459 (492)
T ss_dssp TCBHHHHTTSCCCTTCTHHHH
T ss_pred CCCHHHHhhCCCCCCChHHHH
Confidence 999999999999999999876
No 102
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.54 E-value=3.7e-15 Score=178.54 Aligned_cols=155 Identities=14% Similarity=0.092 Sum_probs=102.8
Q ss_pred hhccccccccccCCceEEeccchhhc---c---HHH---Hhccccc-cccccccccccccccccCCcceEEEEeccCCCc
Q psy14927 373 LEMKRNQSFRSSNTDIILPVEKWTLL---S---LAR---VLEGIEY-KVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDK 442 (1074)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1074)
+.+..|.++|||+.+||..||..-++ + ..| |.+++.. ......+..+|.+++.+|+.+.|++++.+
T Consensus 338 ~~i~vd~~~~Ts~p~IyAiGDv~~~~p~La~~A~~eg~~aa~~i~g~~~~~~d~~~iP~~vft~PeiA~VGlTE~e---- 413 (542)
T 4b1b_A 338 NKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEK---- 413 (542)
T ss_dssp TEECCCTTSBCSSTTEEECTTSBTTCCCCHHHHHHHHHHHHHHHHSCCCCCCCCSSCCEEECSSSCEEEEECCHHH----
T ss_pred ceEeccccccccCCCeEEeccccCCchhHHHHHHHHHHHHHHHHhcCCCcccCCCCCceEEeCCCCeEEEeCCHHH----
Confidence 33578889999999999999986442 1 122 2333332 23345678999999999999999999987
Q ss_pred ccccccccCCCcEEEEeeccCccchhh-----------------hcCCCcceEEEEE-ECCCCcEEEEEEeCCChhHHHH
Q psy14927 443 VLGVHIIGPGIEYKVGKFPFAANSRAK-----------------TNNDTDGFVKVLG-DKLTDKVLGVHIIGPAAGELIN 504 (1074)
Q Consensus 443 ~lg~~~~~~g~~~~v~~~~~~~~~ra~-----------------~~~~~~G~~Kli~-~~~~~~ilG~~iiG~~a~eli~ 504 (1074)
+++.|.++.+..+++...++++ ..+.+.||+|+++ +++|++|||+||+|++|+|+|+
T Consensus 414 -----A~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI~ 488 (542)
T 4b1b_A 414 -----AYELYGKSNVEVFLQEFNNLEISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQ 488 (542)
T ss_dssp -----HHHHHCTTTEEEEEC-----------------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHHH
T ss_pred -----HHHhCCCCcEEEEEeeccchhhhhhhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHHH
Confidence 6666655545444444333322 2356889999996 5579999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhhcccCCccccccccc
Q psy14927 505 EAVLAMEYGASCEDVARTCHAHPTVCVEKNDT 536 (1074)
Q Consensus 505 ~~a~a~~~~~~~~~l~~~~~~hPt~s~e~~~~ 536 (1074)
.+++||+++.|+++|.+++|+|||++|.+.+.
T Consensus 489 ~~alAi~~~~t~~dl~~~i~~HPTlsE~l~~~ 520 (542)
T 4b1b_A 489 GMALALRLKVKKKDFDNCIGIHPTDAESFMNL 520 (542)
T ss_dssp HHHHHHHTCCBHHHHHHC--------------
T ss_pred HHHHHHHcCCCHHHHhccCCcCCCHHHHHHHH
Confidence 99999999999999999999999999987553
No 103
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.53 E-value=2.5e-14 Score=172.56 Aligned_cols=146 Identities=15% Similarity=0.135 Sum_probs=98.5
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhh-------------------------hhHHHhh
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGT-------------------------KSAAVKA 843 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~-------------------------~~~~~~~ 843 (1074)
+.+|||||||++|+.+|..|++ +++|+.+..|+.+.+...+.. ......+
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 4469999999999999999998 899998877765432221110 0001234
Q ss_pred hhhhHHHHhhhCCe--EEEee-eEEEec--C--CeEEEEeCCCCeeEEEcCeEEEccC--CCC--CCCCCCCCCCcceec
Q psy14927 844 LTGGIAHLFKSNKV--TQLNG-HGKITG--P--NTVTVIKSDGSTEEVKTKNILIATG--SEV--TPFPGIEVDEETIVS 912 (1074)
Q Consensus 844 l~~~~~~~l~~~gV--~~~~g-~v~~id--~--~~~~v~~~~G~~~~i~~d~lIIATG--~~p--~~ipgi~~~~~~v~t 912 (1074)
+..++...+.+.|+ +++++ +|+.++ . ..+.|++.+| .++.||+||+||| +.| +.+||++.....+++
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G--~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~ 178 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG--DEVSARFLVVAAGPLSNANTPAFDGLDRFTGDIVH 178 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC--CEEEEEEEEECCCSEEECCCCCCTTGGGCCSEEEE
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC--CEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEE
Confidence 55667777788887 78887 577664 2 2568888888 5799999999999 565 345665432223333
Q ss_pred hhh----HhcchH---------------hhHHhhcCCcEEEEecCCcc
Q psy14927 913 STG----ALSLKK---------------GSVWGRLGAEVTAIEFMNAI 941 (1074)
Q Consensus 913 ~~~----~~~~~~---------------A~~l~~~G~~Vtlv~~~~~~ 941 (1074)
+.. ...... |..|.+.|.+||++.|++..
T Consensus 179 ~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 179 TARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp GGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred eccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 322 122211 77788889999999999874
No 104
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.53 E-value=1.4e-14 Score=171.54 Aligned_cols=156 Identities=31% Similarity=0.370 Sum_probs=134.6
Q ss_pred HhhhhhccccccccccCCceEEeccchhh-----ccHHH---HhccccccccccccccccccccccCCcceEEEEeccCC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL-----LSLAR---VLEGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLT 440 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1074)
+++.+.++.|+++||+..+||..||..-+ ....| |..++......+++..+|..+..+++.+.+++++..
T Consensus 284 ~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~-- 361 (455)
T 1ebd_A 284 MTNRGLIEVDQQCRTSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAGHPSAVDYVAIPAVVFSDPECASVGYFEQQ-- 361 (455)
T ss_dssp BCTTSCBCCCTTCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTSCCCCCCCSCCCEEECSSSCEEEEECCHHH--
T ss_pred cCCCCCEeeCCCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCCCccCCCCCCCEEEECCCceEEEeCCHHH--
Confidence 45567788999999999999999998332 12223 245555444456677889999999999999998776
Q ss_pred CcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHHHh
Q psy14927 441 DKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVA 520 (1074)
Q Consensus 441 ~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~l~ 520 (1074)
++..|+++.+...++..++|+...+++.||+|+++++++|+|||+|++|++++|+|+.+++||+.+.|+++|.
T Consensus 362 -------a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~ 434 (455)
T 1ebd_A 362 -------AKDEGIDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIA 434 (455)
T ss_dssp -------HHTTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHH
T ss_pred -------HHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHh
Confidence 7778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCcccccc
Q psy14927 521 RTCHAHPTVCVEK 533 (1074)
Q Consensus 521 ~~~~~hPt~s~e~ 533 (1074)
+++++|||+++.+
T Consensus 435 ~~~~~~Pt~~e~~ 447 (455)
T 1ebd_A 435 LTIHAHPTLGEIA 447 (455)
T ss_dssp HSCCCTTSSTHHH
T ss_pred hcccCCCCHHHHH
Confidence 9999999999765
No 105
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.51 E-value=2.2e-14 Score=173.43 Aligned_cols=262 Identities=17% Similarity=0.179 Sum_probs=157.2
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhh-------------hhh------------HHHhh
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMG-------------TKS------------AAVKA 843 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~-------------~~~------------~~~~~ 843 (1074)
+.+|+|||||++|+.+|..|++ +++|+.+..|+.+.+...+. +.. ....+
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 95 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPE 95 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHH
Confidence 4459999999999999999998 78998877665432111110 000 00123
Q ss_pred hhhhHHHHhhhCC--eEEEee-eEEEecC----CeEEEEeCCCCeeEEEcCeEEEccCC--CC--CCCCCCCCCCcceec
Q psy14927 844 LTGGIAHLFKSNK--VTQLNG-HGKITGP----NTVTVIKSDGSTEEVKTKNILIATGS--EV--TPFPGIEVDEETIVS 912 (1074)
Q Consensus 844 l~~~~~~~l~~~g--V~~~~g-~v~~id~----~~~~v~~~~G~~~~i~~d~lIIATG~--~p--~~ipgi~~~~~~v~t 912 (1074)
+..++.....+.+ ++++++ +|+.++. ..+.|++++| .++.+|+||+|||. .| +.+||+......+++
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~~~h 173 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG--DRIRARYLIMASGQLSVPQLPNFPGLKDFAGNLYH 173 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC--CEEEEEEEEECCCSCCCCCCCCCTTGGGCCSEEEE
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC--CEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEE
Confidence 3444555555555 567777 5666542 3577888888 57999999999995 44 235554322222232
Q ss_pred hhhHh----cch-H--------------hhHHhhcCCcEEEEecCCccCCCC----CCHHHHH-----------------
Q psy14927 913 STGAL----SLK-K--------------GSVWGRLGAEVTAIEFMNAIGGMG----IDGEVAK----------------- 952 (1074)
Q Consensus 913 ~~~~~----~~~-~--------------A~~l~~~G~~Vtlv~~~~~~~~~~----~~~~~~~----------------- 952 (1074)
+.... ... + +..+...|.+||++.|.+....|. +.+....
T Consensus 174 s~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p~l~~~~~~~~ 253 (542)
T 1w4x_A 174 TGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEFREESRNTP 253 (542)
T ss_dssp GGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHTTHHHHHHHHHTSS
T ss_pred CCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHhhCHHHHHHHHhhc
Confidence 22211 111 1 666777899999999887652121 1111110
Q ss_pred ------------------------------------------------------HHHH----------------------
Q psy14927 953 ------------------------------------------------------QFQR---------------------- 956 (1074)
Q Consensus 953 ------------------------------------------------------~~~~---------------------- 956 (1074)
.+.+
T Consensus 254 ~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~~~~~ 333 (542)
T 1w4x_A 254 GGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPKGYPF 333 (542)
T ss_dssp SSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHHHSCCSSCS
T ss_pred cccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHhcCCCCCCc
Confidence 0001
Q ss_pred -------------HHHhCCCEEE--eCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccC
Q psy14927 957 -------------ILGKQGMQFK--LGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIG 1021 (1074)
Q Consensus 957 -------------~l~~~gV~i~--~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~g 1021 (1074)
.+.+.+|+++ .+..|++|++ ++ |.+.+ +++++|.||+|||+.|++.++ ...+
T Consensus 334 ~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~--~g--v~~~d-------~~~~~D~ii~atG~~~~~~~~--~~~~ 400 (542)
T 1w4x_A 334 GTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITP--RG--VRTSE-------REYELDSLVLATGFDALTGAL--FKID 400 (542)
T ss_dssp SSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECS--SE--EEESS-------CEEECSEEEECCCCCCTTHHH--HTSE
T ss_pred cccCCCCCccHHHHhCCCCEEEEecCCCCceEEcC--Ce--EEeCC-------eEEecCEEEEcCCccccccCc--Ccee
Confidence 1112356666 3567888865 33 43332 579999999999999987652 3332
Q ss_pred cccCCCCCeeeC-------CC--CC-CCCCCEEEe-cccCC--CCCcHHHHHHHHHHHHHHhh
Q psy14927 1022 IEKDEKGRVPVN-------SR--FQ-TVIPNIFAI-GDCIH--GPMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1022 l~ld~~G~I~Vd-------~~--~~-ts~~~IyAi-GD~~~--~~~~~~~A~~~G~~aA~~I~ 1071 (1074)
+. ..+|.+..+ .+ +. .+.||+|++ |+.+. .+..+..|..|++.++++|.
T Consensus 401 i~-g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~ 462 (542)
T 1w4x_A 401 IR-GVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIA 462 (542)
T ss_dssp EE-CGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred eE-CCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHH
Confidence 22 223444332 11 22 478999998 99854 34556889999999999885
No 106
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.50 E-value=2e-14 Score=170.60 Aligned_cols=156 Identities=25% Similarity=0.320 Sum_probs=133.8
Q ss_pred HhhhhhccccccccccCCceEEeccchhhc-----cHHHH---hccccc-cccc-cccccccccccccCCcceEEEEecc
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTLL-----SLARV---LEGIEY-KVGK-FPFAANSRAKTNNDTDGFVKVLGDK 438 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1074)
+++.+.+..|+++|||..+||..||..-+. ...|+ ..++.. .... +++..+|..+..+++.+.+++++..
T Consensus 285 ~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~ 364 (464)
T 2a8x_A 285 LTDRKAIGVDDYMRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAGAETLTLGDHRMLPRATFCQPNVASFGLTEQQ 364 (464)
T ss_dssp BCTTSSBCCCTTSBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHHTCCCCCCCCGGGSCEEECSSSEEEEEECCHHH
T ss_pred cCCCCCEeECcCCccCCCCEEEeECcCCCccCHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEEECCCCeEEEcCCHHH
Confidence 456677999999999999999999984321 12222 444443 3334 5577889999999999999998776
Q ss_pred CCCcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHH
Q psy14927 439 LTDKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCED 518 (1074)
Q Consensus 439 ~~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~ 518 (1074)
++..|+++.+...++..++|+...+++.||+|+++++++++|||+|++|++++|+|+.+++||+.+.|+++
T Consensus 365 ---------a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~ 435 (464)
T 2a8x_A 365 ---------ARNEGYDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASE 435 (464)
T ss_dssp ---------HHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHH
T ss_pred ---------HHhcCCCEEEEEEEcchhhhhhhcCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHH
Confidence 77788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccCCcccccc
Q psy14927 519 VARTCHAHPTVCVEK 533 (1074)
Q Consensus 519 l~~~~~~hPt~s~e~ 533 (1074)
|.+++++|||+++.+
T Consensus 436 l~~~~~~~Pt~~e~~ 450 (464)
T 2a8x_A 436 LARNVHTHPTMSEAL 450 (464)
T ss_dssp HTTSCCCTTCTTHHH
T ss_pred HhhCccCCCChHHHH
Confidence 999999999999766
No 107
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.50 E-value=2.1e-14 Score=171.00 Aligned_cols=156 Identities=44% Similarity=0.659 Sum_probs=135.2
Q ss_pred HhhhhhccccccccccCCceEEeccchhhc--------cHHHHhccccccccccccccccccccccCCcceEEEEeccCC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTLL--------SLARVLEGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLT 440 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1074)
+++.+.+..|+.+||+..+||..||..-+. ....|..++......+++..+|..+..+++.+.+++++..
T Consensus 296 ~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~-- 373 (474)
T 1zmd_A 296 LDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQ-- 373 (474)
T ss_dssp CCTTSCCCCCTTCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTCCCCCCGGGCCEEECSSSEEEEEECCHHH--
T ss_pred cCCCCCEEECcCCccCCCCEEEeeecCCCCccHHHHHHHHHHHHHHhcCCCCcCCCCCCCEEEECCCCeEEEeCCHHH--
Confidence 456677889999999999999999984321 2222355555444557788899999999999999998776
Q ss_pred CcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHHHh
Q psy14927 441 DKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVA 520 (1074)
Q Consensus 441 ~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~l~ 520 (1074)
++..|+++.+...++..++|+...+++.||+|+++++++|+|||+|++|++++|+|+.+++||+.+.|+++|.
T Consensus 374 -------a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~ 446 (474)
T 1zmd_A 374 -------LKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIA 446 (474)
T ss_dssp -------HHHHTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHH
T ss_pred -------HHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHh
Confidence 6667889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCcccccc
Q psy14927 521 RTCHAHPTVCVEK 533 (1074)
Q Consensus 521 ~~~~~hPt~s~e~ 533 (1074)
.++++|||+++.+
T Consensus 447 ~~~~~~Pt~~e~~ 459 (474)
T 1zmd_A 447 RVCHAHPTLSEAF 459 (474)
T ss_dssp HSCCCTTCTHHHH
T ss_pred hCcCCCCCHHHHH
Confidence 9999999999766
No 108
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.50 E-value=2.5e-14 Score=170.20 Aligned_cols=156 Identities=38% Similarity=0.575 Sum_probs=134.3
Q ss_pred HhhhhhccccccccccCCceEEeccchhh--------ccHHHHhccccccccccccccccccccccCCcceEEEEeccCC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL--------LSLARVLEGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLT 440 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1074)
+++.+.+..|+.+||+..+||..||..-+ .....|..++......+++..+|..+..+++.+.+++++..
T Consensus 293 ~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~~e~~-- 370 (470)
T 1dxl_A 293 TDKLGRILVNERFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGKVGHVDYDKVPGVVYTNPEVASVGKTEEQ-- 370 (470)
T ss_dssp BCSSSCBCCCTTCBCSSTTEEECSTTSSSCCCHHHHHHHHHHHHHHHTTSCCCCCTTSCCEEECSSSEEEEEECCHHH--
T ss_pred cCCCCCEeECcCCccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCCCcCCCCCCCCEEEECCCceEEEcCCHHH--
Confidence 35567788999999999999999998332 11222345555444456677889999999999999998776
Q ss_pred CcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHHHh
Q psy14927 441 DKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVA 520 (1074)
Q Consensus 441 ~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~l~ 520 (1074)
++..|+++.+..+++..++|+...+++.||+|+++++++|+|||+|++|++++|+|+.+++||+.+.|+++|.
T Consensus 371 -------a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~ 443 (470)
T 1dxl_A 371 -------VKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIA 443 (470)
T ss_dssp -------HHHTTCCEEEEEEEGGGCHHHHHHSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHH
T ss_pred -------HHhcCCcEEEEEEecccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHh
Confidence 7778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCcccccc
Q psy14927 521 RTCHAHPTVCVEK 533 (1074)
Q Consensus 521 ~~~~~hPt~s~e~ 533 (1074)
.++++|||+++.+
T Consensus 444 ~~~~~~Pt~~e~~ 456 (470)
T 1dxl_A 444 RVCHAHPTMSEAI 456 (470)
T ss_dssp TSCCCSSCTTHHH
T ss_pred hcccCCCChHHHH
Confidence 9999999999765
No 109
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.50 E-value=3.8e-14 Score=170.38 Aligned_cols=167 Identities=14% Similarity=0.149 Sum_probs=131.9
Q ss_pred hhhhccccccccccCCceEEeccchhh--c----cHHH---Hhcccccc-ccccccccccccccccCCcceEEEEeccCC
Q psy14927 371 KYLEMKRNQSFRSSNTDIILPVEKWTL--L----SLAR---VLEGIEYK-VGKFPFAANSRAKTNNDTDGFVKVLGDKLT 440 (1074)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1074)
+++.+..|+++||+..+||..||...| . ...| |..++... ....++..+|.+++.+++.+.|++++.+
T Consensus 332 ~~G~I~Vd~~~~Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~-- 409 (519)
T 3qfa_A 332 KTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEK-- 409 (519)
T ss_dssp TTCCBCCCTTSBCSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSCEEEEECCHHH--
T ss_pred CCCeEeeCCCCccCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcCCCCccCCCCcCcEEEECCCceEEecCCHHH--
Confidence 467789999999999999999998521 1 1222 24444322 2345778889999999999999999887
Q ss_pred CcccccccccCC--CcEEEEeeccCccchhhhcC-CCcceEEEEEEC-CCCcEEEEEEeCCChhHHHHHHHHHHHcCCCH
Q psy14927 441 DKVLGVHIIGPG--IEYKVGKFPFAANSRAKTNN-DTDGFVKVLGDK-LTDKVLGVHIIGPAAGELINEAVLAMEYGASC 516 (1074)
Q Consensus 441 ~~~lg~~~~~~g--~~~~v~~~~~~~~~ra~~~~-~~~G~~Kli~~~-~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~ 516 (1074)
+++.+ ..+.+.+.+|..++++.... .+.||+|+++|+ +|++|||+|++|++++|+|+.+++||+.+.|+
T Consensus 410 -------a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~~t~ 482 (519)
T 3qfa_A 410 -------AVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTK 482 (519)
T ss_dssp -------HHHHHCGGGEEEEEEEECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHHTTCBH
T ss_pred -------HHhhCCCCCEEEEEEeccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCH
Confidence 55442 36788888888877776654 578999999998 58999999999999999999999999999999
Q ss_pred HHHhhhcccCCcccccccc-----ccCCcccccCC
Q psy14927 517 EDVARTCHAHPTVCVEKND-----TLGGTCLNVGC 546 (1074)
Q Consensus 517 ~~l~~~~~~hPt~s~e~~~-----~~ggtc~n~GC 546 (1074)
++|.+++|+|||++|.+.. ..|....+.||
T Consensus 483 ~~l~~~~~~hPt~~E~~~~~~~~~~~~~~~~~~~~ 517 (519)
T 3qfa_A 483 KQLDSTIGIHPVCAEVFTTLSVTKRSGASILQAGS 517 (519)
T ss_dssp HHHHHSCCCTTCGGGGGGGCCCBTTTTCCCCCCCT
T ss_pred HHHhccccCCCChHHHHHHHHhhhhcCCChhhccC
Confidence 9999999999999988744 23444555555
No 110
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.50 E-value=2.9e-14 Score=169.43 Aligned_cols=156 Identities=42% Similarity=0.538 Sum_probs=134.7
Q ss_pred HhhhhhccccccccccCCceEEeccchh-h-cc----HHHH---hccccccccccccccccccccccCCcceEEEEeccC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWT-L-LS----LARV---LEGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKL 439 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (1074)
+++.+.++.|+++||+..+||..||..- + .. ..|+ ..++......+++..+|..+..+++.+.+++++..
T Consensus 290 ~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~- 368 (468)
T 2qae_A 290 KNERGFVKIGDHFETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAGKPGHVNYGVIPAVIYTMPEVASVGKSEDE- 368 (468)
T ss_dssp BCTTSCBCCCTTSBCSSTTEEECGGGBSSSCSCHHHHHHHHHHHHHHHTTCCCCCCTTSCCEEECSSSEEEEEECCHHH-
T ss_pred cCCCCCEeECCCcccCCCCEEEeeccCCCCCccHhHHHHHHHHHHHHHcCCCccCCCCCCCEEEECCCceEEEeCCHHH-
Confidence 4566778999999999999999999854 2 22 2222 44444444456677889999999999999998776
Q ss_pred CCcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHHH
Q psy14927 440 TDKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDV 519 (1074)
Q Consensus 440 ~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~l 519 (1074)
++..|+++.+..+++..++|+...+++.||+|+++++++|+|||+|++|+.++|+|+.+++||+.+.|+++|
T Consensus 369 --------a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l 440 (468)
T 2qae_A 369 --------LKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDV 440 (468)
T ss_dssp --------HHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHH
T ss_pred --------HHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHH
Confidence 777889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCcccccc
Q psy14927 520 ARTCHAHPTVCVEK 533 (1074)
Q Consensus 520 ~~~~~~hPt~s~e~ 533 (1074)
..++++|||+++.+
T Consensus 441 ~~~~~~~Pt~~e~~ 454 (468)
T 2qae_A 441 GRTCHAHPTMSEAL 454 (468)
T ss_dssp HTSCCCSSCTHHHH
T ss_pred hhcccCCCCHHHHH
Confidence 99999999999765
No 111
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.49 E-value=3.2e-14 Score=168.79 Aligned_cols=156 Identities=34% Similarity=0.404 Sum_probs=133.5
Q ss_pred HhhhhhccccccccccCCceEEeccchhh-----c---cHHHHhccccccccccccccccccccccCCcceEEEEeccCC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL-----L---SLARVLEGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLT 440 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1074)
+++.+.++.|+++|||..+||..||..-+ . ....|+.++......+++. +|..+..+++.+.+++++..
T Consensus 285 ~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~-~p~~~~~~~~~a~vG~~e~~-- 361 (464)
T 2eq6_A 285 VDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQ-VPSVVYTSPEWAGVGLTEEE-- 361 (464)
T ss_dssp BCTTSCBCCCTTCBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCCCCCCCC-CCEEECSSSEEEEEECCHHH--
T ss_pred ecCCCCEEECCCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCCCcccCCC-CCeEEECCCCEEEEeCCHHH--
Confidence 45667788999999999999999998432 1 2222355555444456667 88888899999999988776
Q ss_pred CcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHHHh
Q psy14927 441 DKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVA 520 (1074)
Q Consensus 441 ~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~l~ 520 (1074)
++..|+++.+...++..++|+...+++.||+|+++++++|+|||+|++|++++|+|+.+++||+.+.|+++|.
T Consensus 362 -------a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~ 434 (464)
T 2eq6_A 362 -------AKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLA 434 (464)
T ss_dssp -------HHHTTCCEEEEEEEGGGCHHHHHTSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHH
T ss_pred -------HHhcCCCEEEEEEEcCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHh
Confidence 7778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCccccccc
Q psy14927 521 RTCHAHPTVCVEKN 534 (1074)
Q Consensus 521 ~~~~~hPt~s~e~~ 534 (1074)
+++++|||+++.+.
T Consensus 435 ~~~~~~Pt~~e~~~ 448 (464)
T 2eq6_A 435 LTVHPHPTLSESLM 448 (464)
T ss_dssp HSCCCSSCTTHHHH
T ss_pred cCcCCCCChHHHHH
Confidence 99999999997763
No 112
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.49 E-value=4.8e-14 Score=168.49 Aligned_cols=160 Identities=16% Similarity=0.126 Sum_probs=133.6
Q ss_pred HhhhhhccccccccccCCceEEeccchhh--c---cHHHH---hcccccc-ccccccccccccccccCCcceEEEEeccC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL--L---SLARV---LEGIEYK-VGKFPFAANSRAKTNNDTDGFVKVLGDKL 439 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (1074)
+++.+.+..|+++||+..+||..||..-+ + ...|+ +.++... ....++..+|..+..+++.+.|++++..
T Consensus 306 ~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~- 384 (495)
T 2wpf_A 306 LTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEV- 384 (495)
T ss_dssp BCTTSSBCCCTTCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSSCEEEECCSSCEEEEECCHHH-
T ss_pred CCCCCCEEECCCCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCCCCCcCCCCCCCEEEECCCCeEEEeCCHHH-
Confidence 45567788999999999999999998432 1 12222 4444432 2235677889999999999999998776
Q ss_pred CCcccccccccCCCcEEEEeeccCccchhhhcCCCcce-EEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHH
Q psy14927 440 TDKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGF-VKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCED 518 (1074)
Q Consensus 440 ~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~-~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~ 518 (1074)
+++.+.++.+.+.+|..++|++..+.+.|+ +|+++++++++|||+|++|++++|+|+.+++||+.+.|+++
T Consensus 385 --------a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~ 456 (495)
T 2wpf_A 385 --------AAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISD 456 (495)
T ss_dssp --------HHHHSSEEEEEEEEECCTHHHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHH
T ss_pred --------HHhcCCCEEEEEEecCchhhhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHH
Confidence 555566788999999999999999899999 99999999999999999999999999999999999999999
Q ss_pred HhhhcccCCcccccccccc
Q psy14927 519 VARTCHAHPTVCVEKNDTL 537 (1074)
Q Consensus 519 l~~~~~~hPt~s~e~~~~~ 537 (1074)
|..++++|||+++.+....
T Consensus 457 l~~~~~~hPt~~e~~~~~~ 475 (495)
T 2wpf_A 457 FYNTIGVHPTSAEELCSMR 475 (495)
T ss_dssp HHHSCCCSSCSGGGGGSCC
T ss_pred HhhcccCCCChHHHHHHHH
Confidence 9999999999998875544
No 113
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.49 E-value=3.2e-14 Score=170.48 Aligned_cols=156 Identities=19% Similarity=0.188 Sum_probs=134.0
Q ss_pred HhhhhhccccccccccCCceEEeccchhhc-----cHHHH---hcccccc-ccccccccccccccccCCcceEEEEeccC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTLL-----SLARV---LEGIEYK-VGKFPFAANSRAKTNNDTDGFVKVLGDKL 439 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (1074)
+++.+.++.|+++||+..+||..||..-+. ...|+ ..++... ...+++..+|..+..+++.+.+++++..
T Consensus 293 ~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~- 371 (499)
T 1xdi_A 293 LGRGNYLTVDRVSRTLATGIYAAGDCTGLLPLASVAAMQGRIAMYHALGEGVSPIRLRTVAATVFTRPEIAAVGVPQSV- 371 (499)
T ss_dssp CBTTTBCCCCSSSBCSSTTEEECSGGGTSCSCHHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEECSSSEEEEEESCHHH-
T ss_pred ECCCCCEEECCCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCCCCccCCCCCCcEEEEecCCceEeCCCHHH-
Confidence 456677889999999999999999984321 12222 4455443 2456677889999999999999988776
Q ss_pred CCcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHHH
Q psy14927 440 TDKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDV 519 (1074)
Q Consensus 440 ~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~l 519 (1074)
++..|+++.+.++++..++|+...+++.||+|+++++++|+|||+|++|+.++|+|+.+++||+.+.|+++|
T Consensus 372 --------a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l 443 (499)
T 1xdi_A 372 --------IDAGSVAARTIMLPLRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNEL 443 (499)
T ss_dssp --------HHHTSSCEEEEEEESTTSHHHHHTTCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHH
T ss_pred --------HHhCCCCEEEEEEecCcccceeecCCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHH
Confidence 777899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCcccccc
Q psy14927 520 ARTCHAHPTVCVEK 533 (1074)
Q Consensus 520 ~~~~~~hPt~s~e~ 533 (1074)
..++++|||+++.+
T Consensus 444 ~~~~~~~Pt~~e~~ 457 (499)
T 1xdi_A 444 AQTLAVYPSLSGSI 457 (499)
T ss_dssp HTSBCCSSSTHHHH
T ss_pred hcccccCCCchHHH
Confidence 99999999999765
No 114
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.48 E-value=6e-14 Score=167.12 Aligned_cols=158 Identities=18% Similarity=0.196 Sum_probs=130.5
Q ss_pred HhhhhhccccccccccCCceEEeccchhh--c---cHHH---Hhcccccc----ccccccccccccccccCCcceEEEEe
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL--L---SLAR---VLEGIEYK----VGKFPFAANSRAKTNNDTDGFVKVLG 436 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (1074)
+++.+.+..|+++|||..+||..||..-+ + ...| |..++... .+..++..+|..+..+++.+.++++.
T Consensus 298 ~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~vGl~e 377 (479)
T 2hqm_A 298 LNSHDQIIADEYQNTNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSIGISE 377 (479)
T ss_dssp BCTTSCBCCCTTCBCSSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEEECCSSCEEEEECCH
T ss_pred ECCCCCEeECCCCccCCCCEEEEEecCCCcccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeEEECCCCeEEEeCCH
Confidence 45667788899999999999999998322 1 1222 24444332 23356677899999999999999887
Q ss_pred ccCCCcccccccccC-C-CcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCC
Q psy14927 437 DKLTDKVLGVHIIGP-G-IEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGA 514 (1074)
Q Consensus 437 ~~~~~~~lg~~~~~~-g-~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~ 514 (1074)
.. +++. | .++++...++..+++++..+.+.|++|+++++++|+|||+|++|++++|+|+.+++||+.+.
T Consensus 378 ~~---------a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~ 448 (479)
T 2hqm_A 378 KE---------AIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGA 448 (479)
T ss_dssp HH---------HHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTC
T ss_pred HH---------HHhcCCCCcEEEEEEeccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCC
Confidence 66 4444 3 35899999999999999888999999999999999999999999999999999999999999
Q ss_pred CHHHHhhhcccCCcccccccc
Q psy14927 515 SCEDVARTCHAHPTVCVEKND 535 (1074)
Q Consensus 515 ~~~~l~~~~~~hPt~s~e~~~ 535 (1074)
|+++|.+++++|||++|.+..
T Consensus 449 t~~~l~~~~~~hPt~~e~~~~ 469 (479)
T 2hqm_A 449 TKADFDNCVAIHPTSAEELVT 469 (479)
T ss_dssp BHHHHHTSCCCSSCSGGGGGS
T ss_pred CHHHHhhCcCCCCChHHHHHH
Confidence 999999999999999988743
No 115
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.48 E-value=3e-14 Score=171.53 Aligned_cols=158 Identities=16% Similarity=0.116 Sum_probs=134.5
Q ss_pred HhhhhhccccccccccCCceEEeccchhh--------ccHHHHhccccccccccccccccccccccCCcceEEEEeccCC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL--------LSLARVLEGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLT 440 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1074)
+++.+.+..|+++||+..+||..||..-+ .....|+.++......+.+..+|..+..+++.+.+++++..
T Consensus 329 ~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~~e~~-- 406 (523)
T 1mo9_A 329 LGPKGEVLVNEYLQTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYEVSFLGMGEEE-- 406 (523)
T ss_dssp BCTTSCBCCCTTSBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHTTCCCCCCCCSCCEEEESSSEEEEEECCHHH--
T ss_pred cCCCCCEEECCCCccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCCceEEEeCCHHH--
Confidence 45677789999999999999999998432 12222355555444445567788899999999999998777
Q ss_pred CcccccccccCCCcEEEEeeccCc--------------cchhhhc--CCCcceEEEEEECCCCcEEEEEEeCCChhHHHH
Q psy14927 441 DKVLGVHIIGPGIEYKVGKFPFAA--------------NSRAKTN--NDTDGFVKVLGDKLTDKVLGVHIIGPAAGELIN 504 (1074)
Q Consensus 441 ~~~lg~~~~~~g~~~~v~~~~~~~--------------~~ra~~~--~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~ 504 (1074)
++..|+++.+...++.+ ++|+... +++.||+|+++++++++|||+|++|++++|+|+
T Consensus 407 -------a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~ 479 (523)
T 1mo9_A 407 -------ARAAGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQ 479 (523)
T ss_dssp -------HHHTTCCEEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHH
T ss_pred -------HHhCCCCEEEEEEecccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHH
Confidence 77789999999999988 8899988 889999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhh--cccCCcccccccc
Q psy14927 505 EAVLAMEYGASCEDVART--CHAHPTVCVEKND 535 (1074)
Q Consensus 505 ~~a~a~~~~~~~~~l~~~--~~~hPt~s~e~~~ 535 (1074)
.+++||+.+.|+++|.++ +|+|||+++.+..
T Consensus 480 ~~~~ai~~~~t~~~l~~~~~~~~~Pt~~e~~~~ 512 (523)
T 1mo9_A 480 YLNVLIKQGLTVDELGDMDELFLNPTHFIQLSR 512 (523)
T ss_dssp HHHHHHHTTCBHHHHHTSCCCSSCSCCHHHHHH
T ss_pred HHHHHHHCCCCHHHHHhCCcceECCCHHHHHHH
Confidence 999999999999999999 9999999987643
No 116
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.48 E-value=5.7e-14 Score=167.69 Aligned_cols=160 Identities=16% Similarity=0.175 Sum_probs=133.3
Q ss_pred HhhhhhccccccccccCCceEEeccchhh--c---cHHH---Hhcccccc-ccccccccccccccccCCcceEEEEeccC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL--L---SLAR---VLEGIEYK-VGKFPFAANSRAKTNNDTDGFVKVLGDKL 439 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (1074)
+++.+.+..|+.+||+..+||..||..-+ + ...| |..++... ....++..+|..+..+++.+.+++++..
T Consensus 302 ~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~- 380 (490)
T 1fec_A 302 VAKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEED- 380 (490)
T ss_dssp BCTTSCBCCCTTCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSSCCEEECCSSCEEEEECCHHH-
T ss_pred CCCCCCEEECCCCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCCCCCcCCCCCccEEEECCCCeEEEeCCHHH-
Confidence 45567788999999999999999998532 1 1222 24444432 2235677889999999999999998766
Q ss_pred CCcccccccccCCCcEEEEeeccCccchhhhcCCCcceE-EEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHH
Q psy14927 440 TDKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFV-KVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCED 518 (1074)
Q Consensus 440 ~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~-Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~ 518 (1074)
+++.+.++.+.+.+|..++|++..+.+.|++ |+++++++++|||+|++|++++|+|+.+++||+.+.|+++
T Consensus 381 --------a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~ 452 (490)
T 1fec_A 381 --------AAKKYDQVAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISD 452 (490)
T ss_dssp --------HHHHCSEEEEEEEEECCHHHHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHH
T ss_pred --------HHhcCCCEEEEEeecChhhhhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHH
Confidence 5455678899999999999999998999999 9999999999999999999999999999999999999999
Q ss_pred HhhhcccCCcccccccccc
Q psy14927 519 VARTCHAHPTVCVEKNDTL 537 (1074)
Q Consensus 519 l~~~~~~hPt~s~e~~~~~ 537 (1074)
|..++++|||+++.+....
T Consensus 453 l~~~~~~hPt~~e~~~~~~ 471 (490)
T 1fec_A 453 FYNTIGVHPTSAEELCSMR 471 (490)
T ss_dssp HHTSCCCSSCSGGGGGSCC
T ss_pred HhccccCCCCHHHHHHHHH
Confidence 9999999999998875443
No 117
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.47 E-value=5.8e-14 Score=165.88 Aligned_cols=157 Identities=19% Similarity=0.160 Sum_probs=130.5
Q ss_pred HhhhhhccccccccccCCceEEeccchhh--c---cHHHH---hccccccc-cc-cccccccccccccCCcceEEEEecc
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL--L---SLARV---LEGIEYKV-GK-FPFAANSRAKTNNDTDGFVKVLGDK 438 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~---~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1074)
+++.+.++.|+++|||+.+||..||..-+ + ...|+ ..++.... .. .++..+|..+..+++.+.+++++..
T Consensus 279 ~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~ 358 (450)
T 1ges_A 279 TNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQ 358 (450)
T ss_dssp BCTTSCBCCCTTSBCSSTTEEECSGGGTSCCCHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEEECCSSCEEEEECCHHH
T ss_pred ECCCCCEeECCCCccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEEeCCHHH
Confidence 45677788999999999999999998421 1 12222 44444322 22 4677889999999999999987766
Q ss_pred CCCcccccccccC-C-CcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCH
Q psy14927 439 LTDKVLGVHIIGP-G-IEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASC 516 (1074)
Q Consensus 439 ~~~~~lg~~~~~~-g-~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~ 516 (1074)
++.. | .++.+...++..+++++..+.+.|++|+++++++++|||+|++|++++|+|+.+++|++.+.|+
T Consensus 359 ---------a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~ 429 (450)
T 1ges_A 359 ---------AREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATK 429 (450)
T ss_dssp ---------HHHHHCGGGEEEEEEEEECHHHHTSSSCCEEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBH
T ss_pred ---------HHhcCCCCcEEEEEEECchhhHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCH
Confidence 5544 4 5799999999999999988899999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCccccccc
Q psy14927 517 EDVARTCHAHPTVCVEKN 534 (1074)
Q Consensus 517 ~~l~~~~~~hPt~s~e~~ 534 (1074)
++|.+++++|||++|.+.
T Consensus 430 ~~l~~~~~~hPt~~e~~~ 447 (450)
T 1ges_A 430 KDFDNTVAIHPTAAEEFV 447 (450)
T ss_dssp HHHHTSCCCSSCSGGGGG
T ss_pred HHHhcCccCCCChHHHHH
Confidence 999999999999998763
No 118
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.45 E-value=9.5e-14 Score=165.67 Aligned_cols=156 Identities=16% Similarity=0.164 Sum_probs=125.5
Q ss_pred HhhhhhccccccccccCCceEEeccchhh------ccHHHH---hcccccc-ccccccccccccccccCCcceEEEEecc
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL------LSLARV---LEGIEYK-VGKFPFAANSRAKTNNDTDGFVKVLGDK 438 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1074)
+++ +.+..|+.+||++.+||..||...| ....|+ ..++... ...+++..+|.+++.+++.+.|++++..
T Consensus 303 ~~~-G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~ 381 (483)
T 3dgh_A 303 VQK-DKIPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEED 381 (483)
T ss_dssp CBT-TBBCCCTTCBCSSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEECCHHH
T ss_pred ccC-CEEEECcCCccCCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEEEECCCccEEEeCCHHH
Confidence 455 7788899999999999999998532 122333 4444332 2245678899999999999999999877
Q ss_pred CCCcccccccccC-C-CcEEEEeeccCccchhhhc-CCCcceEEEEEECC-CCcEEEEEEeCCChhHHHHHHHHHHHcCC
Q psy14927 439 LTDKVLGVHIIGP-G-IEYKVGKFPFAANSRAKTN-NDTDGFVKVLGDKL-TDKVLGVHIIGPAAGELINEAVLAMEYGA 514 (1074)
Q Consensus 439 ~~~~~lg~~~~~~-g-~~~~v~~~~~~~~~ra~~~-~~~~G~~Kli~~~~-~~~ilG~~iiG~~a~eli~~~a~a~~~~~ 514 (1074)
++++ | ..+.+...+|..+.++... +.+.||+|++++++ |++|||+|++|++++|+|+.+++||+.++
T Consensus 382 ---------a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~ 452 (483)
T 3dgh_A 382 ---------AVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGL 452 (483)
T ss_dssp ---------HHHHHCGGGEEEEEEECCCGGGTTTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTC
T ss_pred ---------HHhhCCCCCEEEEEEeecchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCC
Confidence 5544 3 3577777777776665443 46889999999997 99999999999999999999999999999
Q ss_pred CHHHHhhhcccCCccccccc
Q psy14927 515 SCEDVARTCHAHPTVCVEKN 534 (1074)
Q Consensus 515 ~~~~l~~~~~~hPt~s~e~~ 534 (1074)
|+++|.+++|+|||++|.+.
T Consensus 453 t~~~l~~~~~~hPt~~e~~~ 472 (483)
T 3dgh_A 453 TINTLINTVGIHPTTAEEFT 472 (483)
T ss_dssp BHHHHHTSCCCSSCSGGGGG
T ss_pred CHHHHhhcccCCCChHHHHH
Confidence 99999999999999998874
No 119
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.45 E-value=9.5e-14 Score=165.47 Aligned_cols=156 Identities=43% Similarity=0.619 Sum_probs=134.4
Q ss_pred HhhhhhccccccccccCCceEEeccchhh-----ccHHH---HhccccccccccccccccccccccCCcceEEEEeccCC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL-----LSLAR---VLEGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLT 440 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1074)
+++.+.+..|+.+||+..+||..||..-+ ....| |..++......+++..+|...+.+++.+.+++++.+
T Consensus 301 ~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~-- 378 (478)
T 1v59_A 301 VDKRGRLVIDDQFNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHPEVAWVGKTEEQ-- 378 (478)
T ss_dssp BCTTSCBCCCTTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHSCCCCCTTSCCEEECSSSEEEEEECCHHH--
T ss_pred eCCCCCEeECcCCccCCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCCEEEEcCCcEEEEECCHHH--
Confidence 45567788999999999999999998432 11222 244454444457788899999999999999998877
Q ss_pred CcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHHHh
Q psy14927 441 DKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVA 520 (1074)
Q Consensus 441 ~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~l~ 520 (1074)
++..|+++.+..+++..++|+...+++.|++|+++++++++|||+|++|++++++|+.++++|+.+.|+++|.
T Consensus 379 -------a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~ 451 (478)
T 1v59_A 379 -------LKEAGIDYKIGKFPFAANSRAKTNQDTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVA 451 (478)
T ss_dssp -------HHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHH
T ss_pred -------HHHcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHh
Confidence 7777899999999999999999888899999999999999999999999999999999999999999999999
Q ss_pred hhcccCCcccccc
Q psy14927 521 RTCHAHPTVCVEK 533 (1074)
Q Consensus 521 ~~~~~hPt~s~e~ 533 (1074)
.++++|||+++.+
T Consensus 452 ~~~~~~Pt~~e~~ 464 (478)
T 1v59_A 452 RVCHAHPTLSEAF 464 (478)
T ss_dssp TSCCCTTCTTHHH
T ss_pred hCCCCCCCHHHHH
Confidence 9999999999765
No 120
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.45 E-value=7.5e-14 Score=166.72 Aligned_cols=158 Identities=18% Similarity=0.181 Sum_probs=126.9
Q ss_pred Hh-hhhhccccccccccCCceEEeccchhh------ccHHHH---hcccccc-ccccccccccccccccCCcceEEEEec
Q psy14927 369 VD-KYLEMKRNQSFRSSNTDIILPVEKWTL------LSLARV---LEGIEYK-VGKFPFAANSRAKTNNDTDGFVKVLGD 437 (1074)
Q Consensus 369 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (1074)
++ +.+.+..|+.+||+..+||..||...+ ....|+ ..++... ....++..+|.+++.+++.+.|++++.
T Consensus 301 ~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~ 380 (488)
T 3dgz_A 301 TNPKNQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLSEE 380 (488)
T ss_dssp BCSSSCCBCCCTTSBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEECCHH
T ss_pred ecCCCCeEeECCCCccCCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHcCCCCccCCCCCCCEEEECCCCeEEEeCCHH
Confidence 45 567788899999999999999998422 122222 4444432 233567889999999999999999987
Q ss_pred cCCCcccccccccC-C-CcEEEEeeccCccchhhhcC-CCcceEEEEEE-CCCCcEEEEEEeCCChhHHHHHHHHHHHcC
Q psy14927 438 KLTDKVLGVHIIGP-G-IEYKVGKFPFAANSRAKTNN-DTDGFVKVLGD-KLTDKVLGVHIIGPAAGELINEAVLAMEYG 513 (1074)
Q Consensus 438 ~~~~~~lg~~~~~~-g-~~~~v~~~~~~~~~ra~~~~-~~~G~~Kli~~-~~~~~ilG~~iiG~~a~eli~~~a~a~~~~ 513 (1074)
. +++. | ..+.+.+.+|....++.... .+.||+|+++| ++|++|||+|++|++++|+|+.+++||+.+
T Consensus 381 ~---------a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 451 (488)
T 3dgz_A 381 E---------AVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCG 451 (488)
T ss_dssp H---------HHHHHCGGGEEEEEEECCCHHHHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTT
T ss_pred H---------HHhhCCCCcEEEEEccccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 6 5543 3 36778887887777766544 48899999999 589999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCcccccccc
Q psy14927 514 ASCEDVARTCHAHPTVCVEKND 535 (1074)
Q Consensus 514 ~~~~~l~~~~~~hPt~s~e~~~ 535 (1074)
+|+++|.+++|+|||++|.+..
T Consensus 452 ~t~~~l~~~~~~hPt~~e~~~~ 473 (488)
T 3dgz_A 452 ASYAQVMQTVGIHPTCSEEVVK 473 (488)
T ss_dssp CBHHHHHTSCCCSSCSTHHHHT
T ss_pred CCHHHHhccccCCCChHHHHHH
Confidence 9999999999999999988743
No 121
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.44 E-value=1.4e-13 Score=163.19 Aligned_cols=158 Identities=16% Similarity=0.142 Sum_probs=131.1
Q ss_pred HhhhhhccccccccccCCceEEeccchhh--c---cHHH---Hhccccccc-cc-cccccccccccccCCcceEEEEecc
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL--L---SLAR---VLEGIEYKV-GK-FPFAANSRAKTNNDTDGFVKVLGDK 438 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~---~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1074)
+++.+.++.|+++|||..+||..||..-+ + ...| |..++.... .. .++..+|..+..+++.++++++...
T Consensus 278 ~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~ 357 (463)
T 2r9z_A 278 VQSNGMVPTDAYQNTNVPGVYALGDITGRDQLTPVAIAAGRRLAERLFDGQSERKLDYDNIPTVVFAHPPLSKVGLSEPE 357 (463)
T ss_dssp CCTTSCCCCCTTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHSCCTTCCCCCSSCCEEECCSSCEEEEECCHHH
T ss_pred cCCCCCEeECCCCccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCEEEeCCCCeEEEcCCHHH
Confidence 45677788999999999999999998421 1 1222 244443322 12 5667889999999999999987765
Q ss_pred CCCcccccccccC-CCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHH
Q psy14927 439 LTDKVLGVHIIGP-GIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCE 517 (1074)
Q Consensus 439 ~~~~~lg~~~~~~-g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~ 517 (1074)
++.+ |.++.+...++..+.+++..+.+.|++|+++++++++|||+|++|++++|+|+.+++|++.+.|++
T Consensus 358 ---------a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~ 428 (463)
T 2r9z_A 358 ---------ARERLGDVLTVYETSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKA 428 (463)
T ss_dssp ---------HHHHHCSCEEEEEEEECCGGGTTSSSCCCEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHH
T ss_pred ---------HHhcCCCCEEEEEEEcccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHH
Confidence 4444 467899999999999999888999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccCCcccccccc
Q psy14927 518 DVARTCHAHPTVCVEKND 535 (1074)
Q Consensus 518 ~l~~~~~~hPt~s~e~~~ 535 (1074)
+|.+++++|||+++.+..
T Consensus 429 ~l~~~~~~hPt~~e~~~~ 446 (463)
T 2r9z_A 429 DFDNTVAIHPGSAEELVT 446 (463)
T ss_dssp HHHTSCCCSSSSGGGGGC
T ss_pred HHhcCccCCCCHHHHHHH
Confidence 999999999999998754
No 122
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.43 E-value=1.6e-13 Score=162.41 Aligned_cols=154 Identities=27% Similarity=0.295 Sum_probs=131.1
Q ss_pred hhhhhccccccccccCCceEEeccchhhc--------cHHHHhccccccccccccccccccccccCCcceEEEEeccCCC
Q psy14927 370 DKYLEMKRNQSFRSSNTDIILPVEKWTLL--------SLARVLEGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTD 441 (1074)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1074)
++. .+..++.+||+..+||..||..-+. ....|+.++......+++..+|..+..+++.+.+++++..
T Consensus 283 ~~~-~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~p~~a~vG~~e~~--- 358 (458)
T 1lvl_A 283 NGA-AIAIDERCQTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAEIIAGKARRFEPAAIAAVCFTDPEVVVVGKTPEQ--- 358 (458)
T ss_dssp ETT-EECCCTTCBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHTTCCCCCCCSCCCEEECSSSEEEEEECCHHH---
T ss_pred cCC-EEeECCCCcCCCCCEEEeeccCCCcccHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEECCCCeEEEeCCHHH---
Confidence 344 5788899999999999999984321 2222345554444456677888888999999999988776
Q ss_pred cccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHHHhh
Q psy14927 442 KVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVAR 521 (1074)
Q Consensus 442 ~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~l~~ 521 (1074)
++..|+++.+...++..++|+...+.++|++|+++|+++++|+|+|++|+.++|+|+.+++||+.+.|+++|..
T Consensus 359 ------a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~kl~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~ 432 (458)
T 1lvl_A 359 ------ASQQGLDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAG 432 (458)
T ss_dssp ------HHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHT
T ss_pred ------HHHcCCCEEEEEEECccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhh
Confidence 77788999999999999999999899999999999999999999999999999999999999999999999999
Q ss_pred hcccCCcccccc
Q psy14927 522 TCHAHPTVCVEK 533 (1074)
Q Consensus 522 ~~~~hPt~s~e~ 533 (1074)
++++|||+++.+
T Consensus 433 ~~~~~Pt~~e~~ 444 (458)
T 1lvl_A 433 TIHAHPTLGEAV 444 (458)
T ss_dssp SCCCTTCTTHHH
T ss_pred CcCCCCCHHHHH
Confidence 999999999765
No 123
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.42 E-value=1.9e-13 Score=162.32 Aligned_cols=158 Identities=21% Similarity=0.221 Sum_probs=133.3
Q ss_pred HhhhhhccccccccccCCceEEeccchhh-----ccHHH---HhccccccccccccccccccccccCCcceEEEEeccCC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL-----LSLAR---VLEGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLT 440 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1074)
+++.+.+..++.+||+..+||..||...+ ....| |..++......+++..+|.....+++.+.+++....
T Consensus 285 ~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~~~~-- 362 (467)
T 1zk7_A 285 VNAQGAIVIDQGMRTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAALDLTAMPAVVFTDPQVATVGYSEAE-- 362 (467)
T ss_dssp BCTTSCBCCCTTCBCSSTTEEECSTTBSSCCCHHHHHHHHHHHHHHHTTCCCCCCCTTCEEEECSSSEEEEEECCHHH--
T ss_pred CCCCCCEEECCCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCCCcccCCCCCCEEEecCCceEEEecCHHH--
Confidence 45667788999999999999999997332 11222 244454433456677788888889999998887766
Q ss_pred CcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHHHh
Q psy14927 441 DKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVA 520 (1074)
Q Consensus 441 ~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~l~ 520 (1074)
++..|+++.+...++..++|++..+++.||+|+++++++|+|||+|++|++++++|+.++++|+.+.|+++|.
T Consensus 363 -------a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~ 435 (467)
T 1zk7_A 363 -------AHHDGIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELA 435 (467)
T ss_dssp -------HHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHH
T ss_pred -------HHhcCCCeEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHh
Confidence 6677899999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCcccccccc
Q psy14927 521 RTCHAHPTVCVEKND 535 (1074)
Q Consensus 521 ~~~~~hPt~s~e~~~ 535 (1074)
+++++|||+++.+..
T Consensus 436 ~~~~~~pt~~e~~~~ 450 (467)
T 1zk7_A 436 DQLFPYLTMVEGLKL 450 (467)
T ss_dssp TSCCCTTSTTHHHHH
T ss_pred cCccCCCCHHHHHHH
Confidence 999999999987643
No 124
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.39 E-value=3.6e-13 Score=159.36 Aligned_cols=155 Identities=30% Similarity=0.445 Sum_probs=131.3
Q ss_pred hhhhhccccccccccCCceEEeccchhhc--------cHHHHhccccccccccccccccccccccCCcceEEEEeccCCC
Q psy14927 370 DKYLEMKRNQSFRSSNTDIILPVEKWTLL--------SLARVLEGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTD 441 (1074)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1074)
++.+.+..++.+||+..+||+.||...+. ....|..++......+++...|..+..+++.+.+++++..
T Consensus 279 ~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~~G~~~~~--- 355 (455)
T 2yqu_A 279 DERGRIPVDEHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRGFGHVDYQAIPSVVYTHPEIAAVGYTEEE--- 355 (455)
T ss_dssp CTTSCCCCCTTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHSCCCCCGGGCCEEECSSSEEEEEECCHHH---
T ss_pred CCCCcEeECCCcccCCCCEEEEecCCCCccCHHHHHHhHHHHHHHHcCCCccCCCCCCCEEEEcCCceEEEECCHHH---
Confidence 44566888999999999999999984332 2222244444434445667788888999999999887766
Q ss_pred cccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHHHhh
Q psy14927 442 KVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVAR 521 (1074)
Q Consensus 442 ~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~l~~ 521 (1074)
++..|+++.+...++..++|+...+++.|++|+++++++|+|+|++++|+.++|+|+.++++++.|.++++|..
T Consensus 356 ------a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~ 429 (455)
T 2yqu_A 356 ------LKAQGIPYKVGKFPYSASGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGR 429 (455)
T ss_dssp ------HHHHTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred ------HHHcCCCEEEEEEEcccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhh
Confidence 67778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCcccccc
Q psy14927 522 TCHAHPTVCVEK 533 (1074)
Q Consensus 522 ~~~~hPt~s~e~ 533 (1074)
++++|||+++.+
T Consensus 430 ~~~~~Pt~~e~~ 441 (455)
T 2yqu_A 430 APHAHPSLSEIL 441 (455)
T ss_dssp SCCCSSCTHHHH
T ss_pred cccCCCCHHHHH
Confidence 999999999765
No 125
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.39 E-value=7.1e-13 Score=156.71 Aligned_cols=153 Identities=14% Similarity=0.112 Sum_probs=121.8
Q ss_pred HHhhhhhccccccccccCCceEEeccchhh------------c---cHHH---Hhccccccccccc--cccccccccccC
Q psy14927 368 EVDKYLEMKRNQSFRSSNTDIILPVEKWTL------------L---SLAR---VLEGIEYKVGKFP--FAANSRAKTNND 427 (1074)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~---~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~ 427 (1074)
++++++.+..|+.+|||+.+||..||..-+ + ...| |..++......++ ...+|..++ ++
T Consensus 254 ~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~-~~ 332 (452)
T 3oc4_A 254 QRNLDQTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKTHRFIGSLRTMGTKVG-DY 332 (452)
T ss_dssp CBCTTSCBCCCTTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCCCCCCCCCCCEEEEET-TE
T ss_pred ccCCCCCEEECcCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCccccEEEEEc-Ce
Confidence 356778899999999999999999998432 1 1222 2455544333332 345566666 56
Q ss_pred CcceEEEEeccCCCcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCC-ChhHHHHHH
Q psy14927 428 TDGFVKVLGDKLTDKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGP-AAGELINEA 506 (1074)
Q Consensus 428 ~~~~~~~~~~~~~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~-~a~eli~~~ 506 (1074)
+.+.+++++.+ +++.|+++.+..+++... + ..+.+.||+|++++++|++|||+|++|+ +++|+|+.+
T Consensus 333 ~~a~vG~te~~---------a~~~g~~~~~~~~~~~~~--~-~~~~~~~~~kli~~~~~~~ilG~~~~g~~~a~e~i~~~ 400 (452)
T 3oc4_A 333 YLASTGLTETE---------GLFFPQTLASIIVRQPAP--P-LQHGTEILGKLIYDKVTQRVLGAQLCSKNNCLEKINTL 400 (452)
T ss_dssp EEEEEECCSGG---------GGGSSSCEEEEEEEEECT--T-TTCSCEEEEEEEEETTTCBEEEEEEEESSCCTHHHHHH
T ss_pred eEEEecCCHHH---------HHHCCCceEEEEEecCCc--c-CCCCCeEEEEEEEECCCCEEEEEEEEeCCCHHHHHHHH
Confidence 88889988766 777889999998887554 4 4567899999999999999999999999 799999999
Q ss_pred HHHHHcCCCHHHHhhh-cccCCcccccc
Q psy14927 507 VLAMEYGASCEDVART-CHAHPTVCVEK 533 (1074)
Q Consensus 507 a~a~~~~~~~~~l~~~-~~~hPt~s~e~ 533 (1074)
++||+.+.|+++|..+ +++|||+++..
T Consensus 401 ~~ai~~~~t~~~l~~~~~~~~P~~~~~~ 428 (452)
T 3oc4_A 401 ALSIQTGQTLTDLLQKDYFYQPSLTNIY 428 (452)
T ss_dssp HHHHHTTCBHHHHHTCCCCCCTTTSCSS
T ss_pred HHHHHcCCCHHHHHhhHhccCCCCCCch
Confidence 9999999999999998 89999999765
No 126
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.36 E-value=9e-13 Score=154.87 Aligned_cols=153 Identities=19% Similarity=0.139 Sum_probs=121.4
Q ss_pred HhhhhhccccccccccCCceEEeccchhh------------------ccHHHHhcccccccc-cc-ccccccccccccCC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL------------------LSLARVLEGIEYKVG-KF-PFAANSRAKTNNDT 428 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ 428 (1074)
+++++.++.|+++|||..|||..||.... .....|++++..... .+ ++..+|.+...+++
T Consensus 252 ~~~~G~I~vd~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~ 331 (437)
T 4eqs_A 252 LDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYT 331 (437)
T ss_dssp CCTTSCEECCTTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEE
T ss_pred hccCCcEecCCCccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCCcccccceeEEeeeeccce
Confidence 57788899999999999999999998321 122233556654332 22 45667888999999
Q ss_pred cceEEEEeccCCCcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCC-hhHHHHHHH
Q psy14927 429 DGFVKVLGDKLTDKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPA-AGELINEAV 507 (1074)
Q Consensus 429 ~~~~~~~~~~~~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~-a~eli~~~a 507 (1074)
.+.|++++.+ +++.| +++.++++...+++. .+++.||+|+++|++|++|||+|++|++ ++|+|+.++
T Consensus 332 ia~vGlte~~---------a~~~~--~~~~~~~~~~~~~~~-~~~~~g~~Kli~d~~~~~ilGa~~~g~~~a~e~i~~~~ 399 (437)
T 4eqs_A 332 FASVGVKPNE---------LKQFD--YKMVEVTQGAHANYY-PGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLS 399 (437)
T ss_dssp EEEEESCGGG---------GGGSC--EEEEEEEEESSCTTS-SSCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHH
T ss_pred EEEeeCCHHH---------HHhCC--ceEEEEecCCchhhc-CCCCcEEEEEEEECCCCEEEEEEEECcCCHHHHHHHHH
Confidence 9999998776 55555 556666766666554 4788999999999999999999999985 999999999
Q ss_pred HHHHcCCCHHHHhhhccc-CCcccccc
Q psy14927 508 LAMEYGASCEDVARTCHA-HPTVCVEK 533 (1074)
Q Consensus 508 ~a~~~~~~~~~l~~~~~~-hPt~s~e~ 533 (1074)
+||+.++|+++|.+++++ ||++++..
T Consensus 400 ~ai~~~~t~~~l~~~~~~yhP~~s~~~ 426 (437)
T 4eqs_A 400 MAMMNQLTVDELTEFEVAFAPPYSHPK 426 (437)
T ss_dssp HHHHTTCBGGGGGGCCCCCCTTTCCSS
T ss_pred HHHHcCCcHHHHhcCccccCCCCCchH
Confidence 999999999999999876 89998653
No 127
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.36 E-value=1.1e-12 Score=156.94 Aligned_cols=155 Identities=17% Similarity=0.146 Sum_probs=127.1
Q ss_pred hhhhccccccccccCCceEEeccchh---------------------------------h--cc----HHHH---hcccc
Q psy14927 371 KYLEMKRNQSFRSSNTDIILPVEKWT---------------------------------L--LS----LARV---LEGIE 408 (1074)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~--~~----~~~~---~~~~~ 408 (1074)
+.+.+..|+.+|||..+||..||... + .. ..|+ +.++.
T Consensus 290 ~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~ 369 (500)
T 1onf_A 290 NNNYIVVDENQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLF 369 (500)
T ss_dssp SSSCEEECTTCBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCcccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHh
Confidence 45668889999999999999999861 1 11 1222 33333
Q ss_pred c-cccccccccccccccccCCcceEEEEeccCCCcccccccccC-C-CcEEEEeeccCccchhh----hcCCCcceEEEE
Q psy14927 409 Y-KVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGP-G-IEYKVGKFPFAANSRAK----TNNDTDGFVKVL 481 (1074)
Q Consensus 409 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~-g-~~~~v~~~~~~~~~ra~----~~~~~~G~~Kli 481 (1074)
. ....+++..+|..+..+++.+.+++++.. ++.. | .++.+...++..++++. ..+.+.|++|++
T Consensus 370 g~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~---------a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli 440 (500)
T 1onf_A 370 LKKTRKTNYKLIPTVIFSHPPIGTIGLSEEA---------AIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLV 440 (500)
T ss_dssp SCTTCCCCCSSCCEEECCSSCEEEEECCHHH---------HHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEE
T ss_pred CCCCccCCCCCCCeEEEcCcceEEEeCCHHH---------HHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEE
Confidence 2 22235677889999999999999998766 4444 3 57899999999999998 677899999999
Q ss_pred EECCCCcEEEEEEeCCChhHHHHHHHHHHHcCCCHHHHhhhcccCCccccccc
Q psy14927 482 GDKLTDKVLGVHIIGPAAGELINEAVLAMEYGASCEDVARTCHAHPTVCVEKN 534 (1074)
Q Consensus 482 ~~~~~~~ilG~~iiG~~a~eli~~~a~a~~~~~~~~~l~~~~~~hPt~s~e~~ 534 (1074)
+++++++|||+|++|++++|+|+.+++|++.+.|+++|..++++|||+++.+.
T Consensus 441 ~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~ 493 (500)
T 1onf_A 441 CVGKDELIKGLHIIGLNADEIVQGFAVALKMNATKKDFDETIPIHPTAAEEFL 493 (500)
T ss_dssp EETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSTTHHH
T ss_pred EECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999998763
No 128
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.35 E-value=9.3e-13 Score=155.57 Aligned_cols=154 Identities=16% Similarity=0.104 Sum_probs=123.6
Q ss_pred HhhhhhccccccccccCCceEEeccchh------h---------ccHHHH---hcccccccccccc-ccccccccccCCc
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWT------L---------LSLARV---LEGIEYKVGKFPF-AANSRAKTNNDTD 429 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---------~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~ 429 (1074)
+++.+.+..|+.+||+..+||..||... | ....|+ ..++......++. ...+.....+++.
T Consensus 256 ~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~ 335 (449)
T 3kd9_A 256 IGETGAIWTNEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKELHFPGVLGTAVTKFMDVEI 335 (449)
T ss_dssp BCTTSSBCCCTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEE
T ss_pred CCCCCCEEECCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEcCcEE
Confidence 5667779999999999999999999842 2 122222 4444443333432 3457788999999
Q ss_pred ceEEEEeccCCCcccccccccCCCcEEEEeeccCccchhhhc-CCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHHHH
Q psy14927 430 GFVKVLGDKLTDKVLGVHIIGPGIEYKVGKFPFAANSRAKTN-NDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEAVL 508 (1074)
Q Consensus 430 ~~~~~~~~~~~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~-~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~a~ 508 (1074)
+.+++++.+ +++.|+++.+..++ .++|+... +.+.||+|++++++|++|||+|++|++++|+|+.+++
T Consensus 336 ~~vG~~e~~---------a~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ 404 (449)
T 3kd9_A 336 GKTGLTEME---------ALKEGYDVRTAFIK--ASTRPHYYPGGREIWLKGVVDNETNRLLGVQVVGSDILPRIDTAAA 404 (449)
T ss_dssp EEEECCHHH---------HHHTTCCEEEEEEE--EESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSCHHHHHHHHH
T ss_pred EEecCCHHH---------HHHCCCceEEEEEe--cCCccccCCCCceEEEEEEEECCCCEEEEEEEEChHHHHHHHHHHH
Confidence 999999877 77788888888765 45666665 7789999999999999999999999999999999999
Q ss_pred HHHcCCCHHHHhhh-cccCCcccccc
Q psy14927 509 AMEYGASCEDVART-CHAHPTVCVEK 533 (1074)
Q Consensus 509 a~~~~~~~~~l~~~-~~~hPt~s~e~ 533 (1074)
||+.|.|+++|..+ +++||++++..
T Consensus 405 ai~~~~t~~~l~~~~~~~~p~~~~~~ 430 (449)
T 3kd9_A 405 MLMAGFTTKDAFFTDLAYAPPFAPVW 430 (449)
T ss_dssp HHHTTCBHHHHHTCCCCCBTTTBCSS
T ss_pred HHHcCCcHHHHhhcccccCCCCCCch
Confidence 99999999999998 56899998654
No 129
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.33 E-value=1.2e-12 Score=155.82 Aligned_cols=153 Identities=16% Similarity=0.122 Sum_probs=107.1
Q ss_pred HhhhhhccccccccccCCceEEeccchh------h---------ccHHH---Hhcccccccccccccccc--ccccccCC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWT------L---------LSLAR---VLEGIEYKVGKFPFAANS--RAKTNNDT 428 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---------~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~ 428 (1074)
+++.+.+..++.+||+..+||..||... | ....| |+.++......++. ..+ -....+++
T Consensus 270 ~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~-~~~~~~~~~~~~~ 348 (472)
T 3iwa_A 270 LDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDATFPG-AVGSWAVKLFEGS 348 (472)
T ss_dssp BCTTCCEECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCCCCCCC-BCCCEEEECSSCE
T ss_pred CCCCCCEEECCCcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCC-CCcceEEEECCce
Confidence 5667778999999999999999999841 2 12233 35555543333221 222 23456899
Q ss_pred cceEEEEeccCCCcccccccccCCCcEEEEeeccCccchhhhc-CCCcceEEEEEECCCCcEEEEEEeCC---ChhHHHH
Q psy14927 429 DGFVKVLGDKLTDKVLGVHIIGPGIEYKVGKFPFAANSRAKTN-NDTDGFVKVLGDKLTDKVLGVHIIGP---AAGELIN 504 (1074)
Q Consensus 429 ~~~~~~~~~~~~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~-~~~~G~~Kli~~~~~~~ilG~~iiG~---~a~eli~ 504 (1074)
.+.+++++.+ +++.|+++.+..+ ...+|+... +.+.||+|+++|++|++|||+|++|+ +++|+|+
T Consensus 349 ~a~vG~~e~~---------a~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~ 417 (472)
T 3iwa_A 349 ASGAGLTVEG---------ALREGYDAVNVHV--EQFDRAHFYPEKTIMTLQLVVDRPTRRVLGIQGFSTLGDALTARIN 417 (472)
T ss_dssp EEEEECCHHH---------HHHTTCCEEEEEE--EC-----------CEEEEEEEETTTCBEEEEEEEESCHHHHHHHHH
T ss_pred eEEEECCHHH---------HHHcCCceEEEEE--ecCCccCccCCCceEEEEEEEECCCCEEEEEEEECCCcccHHHHHH
Confidence 9999998876 7778888888765 456778777 88999999999999999999999999 5699999
Q ss_pred HHHHHHHcCCCHHHHhhhcccC-Ccccccc
Q psy14927 505 EAVLAMEYGASCEDVARTCHAH-PTVCVEK 533 (1074)
Q Consensus 505 ~~a~a~~~~~~~~~l~~~~~~h-Pt~s~e~ 533 (1074)
.+++||+.+.|+++|.+++++| ||+++..
T Consensus 418 ~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~ 447 (472)
T 3iwa_A 418 AVATMLASKPTVEDISNAEVVYSPPFASAM 447 (472)
T ss_dssp HHHHHHTTCCBHHHHHTCCCC--------C
T ss_pred HHHHHHHcCCCHHHHhcccccCCCCCCCcc
Confidence 9999999999999999999998 9999765
No 130
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.28 E-value=5.7e-12 Score=154.38 Aligned_cols=158 Identities=18% Similarity=0.199 Sum_probs=127.2
Q ss_pred HhhhhhccccccccccCCceEEeccchhh---c---cHHHH---hcccccc-ccccccccccccccccCCcceEEEEecc
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL---L---SLARV---LEGIEYK-VGKFPFAANSRAKTNNDTDGFVKVLGDK 438 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1074)
+++.+.+..|+.+|||..+||..||...| + ...|+ +..+... ....++..+|..+..+++.+.+++++..
T Consensus 409 ~~~~G~i~vd~~~~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~ 488 (598)
T 2x8g_A 409 LDKNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVFTPLEYGACGLSEED 488 (598)
T ss_dssp BCTTSCBCCCTTSBCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEECSSSCEEEEECCHHH
T ss_pred ECCCCcEEeCCCCcCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEEECCCceEEEeCCHHH
Confidence 45667788999999999999999999433 1 12222 3444322 2234577888999999999999987665
Q ss_pred CCCcccccccccC-C-CcEEEEeeccCccchhhhcCC-CcceEEEEEEC-CCCcEEEEEEeCCChhHHHHHHHHHHHcCC
Q psy14927 439 LTDKVLGVHIIGP-G-IEYKVGKFPFAANSRAKTNND-TDGFVKVLGDK-LTDKVLGVHIIGPAAGELINEAVLAMEYGA 514 (1074)
Q Consensus 439 ~~~~~lg~~~~~~-g-~~~~v~~~~~~~~~ra~~~~~-~~G~~Kli~~~-~~~~ilG~~iiG~~a~eli~~~a~a~~~~~ 514 (1074)
++.. | ..+.+.+.+|..+.+++..+. +.|++|+++++ ++|+|||+|++|++++|+|+.+++||+.+.
T Consensus 489 ---------a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~ 559 (598)
T 2x8g_A 489 ---------AIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGA 559 (598)
T ss_dssp ---------HHHHHCGGGEEEEEEEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHHHHHHHTTC
T ss_pred ---------HHhhCCCCcEEEEEEeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHcCC
Confidence 4433 3 358888889999999887754 78999999996 699999999999999999999999999999
Q ss_pred CHHHHhhhcccCCcccccccc
Q psy14927 515 SCEDVARTCHAHPTVCVEKND 535 (1074)
Q Consensus 515 ~~~~l~~~~~~hPt~s~e~~~ 535 (1074)
|+++|.+++|+|||+++.+..
T Consensus 560 t~~~l~~~~~~hPt~~e~~~~ 580 (598)
T 2x8g_A 560 TKADFDRTIGIHPTCSETFTT 580 (598)
T ss_dssp BHHHHHHSCCCSSCSGGGGGS
T ss_pred CHHHHhhccccCCCHHHHHHH
Confidence 999999999999999988744
No 131
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.27 E-value=1.2e-12 Score=155.31 Aligned_cols=201 Identities=15% Similarity=0.093 Sum_probs=113.8
Q ss_pred hhhHHHHhhhCCeEEEeee-EEEec--CCeE-EEEeCCCCeeEEEcCeEEEccCCCCCCCC------CCCCCCcc-----
Q psy14927 845 TGGIAHLFKSNKVTQLNGH-GKITG--PNTV-TVIKSDGSTEEVKTKNILIATGSEVTPFP------GIEVDEET----- 909 (1074)
Q Consensus 845 ~~~~~~~l~~~gV~~~~g~-v~~id--~~~~-~v~~~~G~~~~i~~d~lIIATG~~p~~ip------gi~~~~~~----- 909 (1074)
...+.+.+++.||+++.++ | .+. .+.+ .+...+. ..++.+|.||+|||+.+..++ +..+++..
T Consensus 122 ~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~-~g~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~a 199 (472)
T 2e5v_A 122 FNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKR-GLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKA 199 (472)
T ss_dssp HHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTT-EEECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeC-CCeEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHc
Confidence 3445556667899999995 7 663 3333 1233221 135789999999999863222 11111100
Q ss_pred ---eechhhHh------------cchHhhHHhhcCCcEEEEecCCccCCCCCCHHH--------HHHHHHHHHhCCCEEE
Q psy14927 910 ---IVSSTGAL------------SLKKGSVWGRLGAEVTAIEFMNAIGGMGIDGEV--------AKQFQRILGKQGMQFK 966 (1074)
Q Consensus 910 ---v~t~~~~~------------~~~~A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~--------~~~~~~~l~~~gV~i~ 966 (1074)
+... ++. ...-+..++..|..| +..++++++ +.+++.. ...+.+.+++.|. ++
T Consensus 200 Ga~~~d~-e~~q~~p~~~~~ggg~~~~ae~~~~~G~~~-v~~~g~rf~-~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ 275 (472)
T 2e5v_A 200 GTILADM-EFVQFHPTVTSLDGEVFLLTETLRGEGAQI-INENGERFL-FNYDKRGELAPRDILSRAIYIEMLKGHK-VF 275 (472)
T ss_dssp TCCEECT-TCEEEEEEEECGGGCCEECCTHHHHTTCEE-EETTCCCGG-GGTCTTGGGSCHHHHHHHHHHHHHHTCC-EE
T ss_pred CCCEeCC-cceEEEeEEEccCCCceeeehhhcCCceEE-ECCCCCCCC-ccCCcccCcCchhHHHHHHHHHHHhCCc-EE
Confidence 0000 000 000044566677776 777888887 5555443 5566666766653 22
Q ss_pred eCceEEEEEecCCeEEEEEeeccCCCCceEEE-cCEEEEccCCcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEE
Q psy14927 967 LGTKVTGASKSGDNITVTIENVKDPTKKEELS-CDALLVCVGRRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFA 1045 (1074)
Q Consensus 967 ~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~-~D~vi~a~G~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyA 1045 (1074)
.+... + +. +. ..++ .|.+++++|..|+ +++..... .....|.|.||++++|++|||||
T Consensus 276 ld~~~--~---~~-----~~--------~~~~~~~~~~~~~G~dp~-~~i~v~p~--~~~~~GGI~vd~~~~t~ipgLyA 334 (472)
T 2e5v_A 276 IDLSK--I---ED-----FE--------RKFPVVAKYLARHGHNYK-VKIPIFPA--AHFVDGGIRVNIRGESNIVNLYA 334 (472)
T ss_dssp EECTT--C---TT-----HH--------HHCHHHHHHHHHTTCCTT-SCEECEEE--EEEESCEEECCTTCBCSSBTEEE
T ss_pred Eeccc--h---HH-----HH--------HHhHHHHHHHHHhCcCcc-cceEeehh--hceeCCCeEECCCCccccCCEEe
Confidence 22110 0 00 00 1233 4677888999999 65432222 22336889999999999999999
Q ss_pred ecccCC-CC----CcHHHHHHH----HHHHHHHhhC
Q psy14927 1046 IGDCIH-GP----MLAHKAEDE----GIVCVEGIAG 1072 (1074)
Q Consensus 1046 iGD~~~-~~----~~~~~A~~~----G~~aA~~I~~ 1072 (1074)
+|||+. +. .++..|..+ |+.|+.+|++
T Consensus 335 aGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 335 IGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp CGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred cchhcccccCCCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 999987 32 345555555 6666666543
No 132
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.18 E-value=4e-10 Score=134.57 Aligned_cols=228 Identities=16% Similarity=0.146 Sum_probs=130.4
Q ss_pred hhhhhHHHHhhhCCeEEEee-eEEEecC----------CeEEEEeC---CCCeeEEEcCeEEEccCCCCCCCCCCCCCCc
Q psy14927 843 ALTGGIAHLFKSNKVTQLNG-HGKITGP----------NTVTVIKS---DGSTEEVKTKNILIATGSEVTPFPGIEVDEE 908 (1074)
Q Consensus 843 ~l~~~~~~~l~~~gV~~~~g-~v~~id~----------~~~~v~~~---~G~~~~i~~d~lIIATG~~p~~ipgi~~~~~ 908 (1074)
++.+++.....+++..+.+| +|+.+.. ..++|++. +|...++.++.||+|||..| .+|+......
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P-~iP~~~~~~g 224 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTA-KMPSGLPQDP 224 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEE-CCCTTSCCCT
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCC-CCCCCCCCCc
Confidence 45555565666667667777 4666532 23667664 34556899999999999876 4666555556
Q ss_pred ceechhhHhcc-----------hH-------------hhHHhhc--CCcEEEEecCCccCCCC--------CCHH-----
Q psy14927 909 TIVSSTGALSL-----------KK-------------GSVWGRL--GAEVTAIEFMNAIGGMG--------IDGE----- 949 (1074)
Q Consensus 909 ~v~t~~~~~~~-----------~~-------------A~~l~~~--G~~Vtlv~~~~~~~~~~--------~~~~----- 949 (1074)
.++++.++... +. +..|.+. +.+|+++.|++.+.+.. +.|+
T Consensus 225 ~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f 304 (501)
T 4b63_A 225 RIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKF 304 (501)
T ss_dssp TEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHH
T ss_pred ceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCccccccccccchhhcCHHHHHHH
Confidence 67766665431 11 3334332 67999999987654211 1111
Q ss_pred ------HHHHHH--------------------HH-----HH-----hCCCEEEeCceEEEEEecCC--eEEEEEeecc--
Q psy14927 950 ------VAKQFQ--------------------RI-----LG-----KQGMQFKLGTKVTGASKSGD--NITVTIENVK-- 989 (1074)
Q Consensus 950 ------~~~~~~--------------------~~-----l~-----~~gV~i~~~~~v~~i~~~~~--~~~v~~~~~~-- 989 (1074)
.+..+. +. +. .....+..+..+..+...+. .+.+......
T Consensus 305 ~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~ 384 (501)
T 4b63_A 305 YSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILPERKITRVEHHGPQSRMRIHLKSSKPE 384 (501)
T ss_dssp HTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEECSEEEEEEECCSSSSCEEEEEEESCC-
T ss_pred HhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccceeecCCcceeeeeecCCCCeEEEEeeeeEEe
Confidence 111110 00 10 11235666666666654322 2333322110
Q ss_pred ----CCCCceEEEcCEEEEccCCcccCC-ccCccccCcccCCCCCeeeCCCCCC--------CCCCEEEecccCC-----
Q psy14927 990 ----DPTKKEELSCDALLVCVGRRPYTH-NLGLEEIGIEKDEKGRVPVNSRFQT--------VIPNIFAIGDCIH----- 1051 (1074)
Q Consensus 990 ----~~g~~~~i~~D~vi~a~G~~p~~~-~l~l~~~gl~ld~~G~I~Vd~~~~t--------s~~~IyAiGD~~~----- 1051 (1074)
..+.++++++|.||+|||++|+.. ++.-....+..|.+|.+.|+..++. ..++||+-|-+-.
T Consensus 385 ~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~thG~~ 464 (501)
T 4b63_A 385 SEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERTHGLS 464 (501)
T ss_dssp -------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHHHCTT
T ss_pred CCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCCcccCCcc
Confidence 023467899999999999998763 2111112356677888888876652 2467999985422
Q ss_pred CCCcHHHHHHHHHHHHHHhhC
Q psy14927 1052 GPMLAHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 1052 ~~~~~~~A~~~G~~aA~~I~~ 1072 (1074)
.|.+...|.+.|.++ ..|+|
T Consensus 465 ~~~Ls~~a~R~~~I~-~~l~g 484 (501)
T 4b63_A 465 DSLLSVLAVRGGEMV-QSIFG 484 (501)
T ss_dssp TTSSTTHHHHHHHHH-HHHHH
T ss_pred hhhHHHHHHHHHHHH-HHHhc
Confidence 255566788877654 44544
No 133
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.17 E-value=2.5e-11 Score=148.43 Aligned_cols=153 Identities=15% Similarity=0.118 Sum_probs=117.6
Q ss_pred HhhhhhccccccccccCCceEEeccchh------h------c---cHHH---Hhccccc-cccccccccccc--cccccC
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWT------L------L---SLAR---VLEGIEY-KVGKFPFAANSR--AKTNND 427 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~------~---~~~~---~~~~~~~-~~~~~~~~~~~~--~~~~~~ 427 (1074)
+++.+.+..++.+||+..+||..||... | + ...| |..++.. ....++ ...+. ....++
T Consensus 294 ~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~-~~~~~~~~~~~~~ 372 (588)
T 3ics_A 294 LGVRGTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLYK-GTLGTSVAKVFDL 372 (588)
T ss_dssp BCGGGCBCCCTTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSSCCC-CBCCCEEEEETTE
T ss_pred EcCCCCEEECCccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcCCCccccC-CcccceEEEECCe
Confidence 5677889999999999999999999852 2 1 1222 2444443 222222 22232 235689
Q ss_pred CcceEEEEeccCCCcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCC-hhHHHHHH
Q psy14927 428 TDGFVKVLGDKLTDKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPA-AGELINEA 506 (1074)
Q Consensus 428 ~~~~~~~~~~~~~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~-a~eli~~~ 506 (1074)
+.+.|++++.. +++.|+++.+..++.... .+...+.+.||+|+++|++|++|||+|++|++ ++|+|+.+
T Consensus 373 ~~a~vGlte~~---------a~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~ 442 (588)
T 3ics_A 373 TVATTGLNEKI---------LKRLNIPYEVVHVQANSH-AGYYPNATPVLIKLIFNKDSGKIYGAQTLGRDGVDKRMDVI 442 (588)
T ss_dssp EEEEEECCHHH---------HHHTTCCCEEEEEEEESS-CTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHH
T ss_pred EEEEecCCHHH---------HHHcCCCeEEEEEecCCc-cccCCCCceEEEEEEEECCCCeEEEEEEEcCCcHHHHHHHH
Confidence 99999998877 777898998887764332 23567889999999999999999999999985 89999999
Q ss_pred HHHHHcCCCHHHHhhhcccC-Cccccc
Q psy14927 507 VLAMEYGASCEDVARTCHAH-PTVCVE 532 (1074)
Q Consensus 507 a~a~~~~~~~~~l~~~~~~h-Pt~s~e 532 (1074)
++||+.+.|+++|.+++++| |+++..
T Consensus 443 ~~ai~~~~t~~~l~~~~~~~~P~~~~~ 469 (588)
T 3ics_A 443 ATAIKANLTVLDLPDLELSYAPPYSSA 469 (588)
T ss_dssp HHHHHTTCBTTTGGGCCCCCSTTTCCS
T ss_pred HHHHHcCCCHHHhhhhhhccCCCcccc
Confidence 99999999999999999988 988744
No 134
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.17 E-value=2.3e-11 Score=143.50 Aligned_cols=154 Identities=18% Similarity=0.138 Sum_probs=119.1
Q ss_pred HhhhhhccccccccccCCceEEeccchh------h---------ccHHHH---hccccccccccc-cccccccccccCCc
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWT------L---------LSLARV---LEGIEYKVGKFP-FAANSRAKTNNDTD 429 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---------~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~ 429 (1074)
+++++.+..|+++||++.+||..||... | ....|+ ..++......++ ....+.....+++.
T Consensus 257 ~~~~G~i~Vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~ 336 (447)
T 1nhp_A 257 LHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPVKPFPGVQGSSGLAVFDYKF 336 (447)
T ss_dssp BCTTSCBCCCTTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEE
T ss_pred hcCCCcEEECccccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCCCCCCCccccEEEEECCeee
Confidence 4566778899999999999999999853 1 122222 444543221121 23456677788888
Q ss_pred ceEEEEeccCCCcccccccccCCCcEEEEeeccCccchhhhc-CCCcceEEEEEECCCCcEEEEEEeCCC-hhHHHHHHH
Q psy14927 430 GFVKVLGDKLTDKVLGVHIIGPGIEYKVGKFPFAANSRAKTN-NDTDGFVKVLGDKLTDKVLGVHIIGPA-AGELINEAV 507 (1074)
Q Consensus 430 ~~~~~~~~~~~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~-~~~~G~~Kli~~~~~~~ilG~~iiG~~-a~eli~~~a 507 (1074)
+.++++... ++..|+++.+.. +..+.++..+ +.+.|++|+++++++++|||+|++|+. ++|+|+.++
T Consensus 337 ~~vG~~~~~---------a~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~a~e~i~~~~ 405 (447)
T 1nhp_A 337 ASTGINEVM---------AQKLGKETKAVT--VVEDYLMDFNPDKQKAWFKLVYDPETTQILGAQLMSKADLTANINAIS 405 (447)
T ss_dssp EEEECCHHH---------HHHHTCCCEEEE--EEEESSCTTCTTCCEEEEEEEECTTTCBEEEEEEEESSCCTTHHHHHH
T ss_pred EEecCCHHH---------HHHcCCceEEEE--EEcCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHH
Confidence 888877654 555677777664 5667777776 678899999999999999999999999 999999999
Q ss_pred HHHHcCCCHHHHhhh-cccCCcccccc
Q psy14927 508 LAMEYGASCEDVART-CHAHPTVCVEK 533 (1074)
Q Consensus 508 ~a~~~~~~~~~l~~~-~~~hPt~s~e~ 533 (1074)
++|+.+.|+++|..+ +++|||+++..
T Consensus 406 ~ai~~~~~~~~l~~~~~~~~Pt~~e~~ 432 (447)
T 1nhp_A 406 LAIQAKMTIEDLAYADFFFQPAFDKPW 432 (447)
T ss_dssp HHHHTTCBHHHHHTCCCCCCTTTCCSS
T ss_pred HHHHcCCCHHHHhhcceecCCCCCCcc
Confidence 999999999999997 79999999765
No 135
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.15 E-value=3.8e-11 Score=141.84 Aligned_cols=154 Identities=13% Similarity=0.008 Sum_probs=117.1
Q ss_pred HhhhhhccccccccccCCceEEeccchhh-----------cc----HHHH---hccccccccccc-cccccccccccCCc
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL-----------LS----LARV---LEGIEYKVGKFP-FAANSRAKTNNDTD 429 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~----~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~ 429 (1074)
+++++.+..|+++|||..+||..||..-. .. ..|+ ..++......++ ....+....-+++.
T Consensus 258 ~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~ 337 (452)
T 2cdu_A 258 MLDNGAIITDEYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDKVKDMGTQSSSGLKLYGRTY 337 (452)
T ss_dssp BCTTSCBCCCTTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEE
T ss_pred cCCCCCEEECCCcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCCCcCCCccceEEEEECCeee
Confidence 56677799999999999999999998432 11 2222 455543221111 11223344447777
Q ss_pred ceEEEEeccCCCcccccccccCCCcEEEEeeccCccchhhhc-CCCcceEEEEEECCCCcEEEEEEeCC-ChhHHHHHHH
Q psy14927 430 GFVKVLGDKLTDKVLGVHIIGPGIEYKVGKFPFAANSRAKTN-NDTDGFVKVLGDKLTDKVLGVHIIGP-AAGELINEAV 507 (1074)
Q Consensus 430 ~~~~~~~~~~~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~-~~~~G~~Kli~~~~~~~ilG~~iiG~-~a~eli~~~a 507 (1074)
+.+++.... ++..|+++.+. .+..+.|+..+ +.+.|++|+++++++++|||+|++|+ +++|+|+.++
T Consensus 338 ~~vG~~~~~---------a~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~i~~~~ 406 (452)
T 2cdu_A 338 VSTGINTAL---------AKANNLKVSEV--IIADNYRPEFMLSTDEVLMSLVYDPKTRVILGGALSSMHDVSQSANVLS 406 (452)
T ss_dssp EEEECCHHH---------HHHTTCCCEEE--EEEEESSCTTBSCCCEEEEEEEECTTTCBEEEEEEEESSCCHHHHHHHH
T ss_pred EeecCCHHH---------HHHcCCceEEE--EEecCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHH
Confidence 778776654 66677777777 36778888876 66889999999999999999999999 8999999999
Q ss_pred HHHHcCCCHHHHhhh-cccCCcccccc
Q psy14927 508 LAMEYGASCEDVART-CHAHPTVCVEK 533 (1074)
Q Consensus 508 ~a~~~~~~~~~l~~~-~~~hPt~s~e~ 533 (1074)
++|+.+.|+++|..+ +++|||+++..
T Consensus 407 ~ai~~~~~~~~l~~~~~~~~Pt~~e~~ 433 (452)
T 2cdu_A 407 VCIQNKNTIDDLAMVDMLFQPQFDRPF 433 (452)
T ss_dssp HHHHTTCBHHHHHHSCCCCCTTTCCSS
T ss_pred HHHHcCCCHHHHhhhhhccCCCCCchH
Confidence 999999999999986 89999999765
No 136
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.15 E-value=5.8e-11 Score=141.29 Aligned_cols=154 Identities=18% Similarity=0.062 Sum_probs=119.4
Q ss_pred HhhhhhccccccccccCCceEEeccchh------h---------ccHHHH---hcccccccccc-ccccccccccccCCc
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWT------L---------LSLARV---LEGIEYKVGKF-PFAANSRAKTNNDTD 429 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---------~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~ 429 (1074)
+++++.++.|+++|||..+||..||... | ....|+ ..++......+ +....+.....+++.
T Consensus 294 ~~~~G~I~Vd~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~ 373 (480)
T 3cgb_A 294 TNHKGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKRRAFKGTLGTGIIKFMNLTL 373 (480)
T ss_dssp BCTTSCBCCCTTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEE
T ss_pred cCCCCCEEECCCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCCccCCCccceeEEEECCcEE
Confidence 4566778999999999999999999842 1 122233 44444332233 234567888999999
Q ss_pred ceEEEEeccCCCcccccccccCCCcEEEEeeccCccchhhhc-CCCcceEEEEEECCCCcEEEEEEeCCC-hhHHHHHHH
Q psy14927 430 GFVKVLGDKLTDKVLGVHIIGPGIEYKVGKFPFAANSRAKTN-NDTDGFVKVLGDKLTDKVLGVHIIGPA-AGELINEAV 507 (1074)
Q Consensus 430 ~~~~~~~~~~~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~-~~~~G~~Kli~~~~~~~ilG~~iiG~~-a~eli~~~a 507 (1074)
+.++++... ++..|+++.+..+... .++... +.+.|++|+++++++++|||+|++|+. ++|+|+.++
T Consensus 374 ~~vG~~~~~---------a~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~ 442 (480)
T 3cgb_A 374 ARTGLNEKE---------AKGLHIPYKTVKVDST--NMAGYYPNAKPLYLKLLYRSDTKQLLGGQVIGEEGVDKRIDVIA 442 (480)
T ss_dssp EEEECCHHH---------HHHTTCCEEEEEEEEE--SSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHH
T ss_pred EEeCCCHHH---------HHHcCCceEEEEEecC--CcccccCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHH
Confidence 999887655 6667888888776653 344333 578899999999999999999999999 999999999
Q ss_pred HHHHcCCCHHHHhhh-cccCCcccccc
Q psy14927 508 LAMEYGASCEDVART-CHAHPTVCVEK 533 (1074)
Q Consensus 508 ~a~~~~~~~~~l~~~-~~~hPt~s~e~ 533 (1074)
+||+.+.|+++|..+ +++|||+++..
T Consensus 443 ~ai~~~~~~~~l~~~~~~~~Pt~~e~~ 469 (480)
T 3cgb_A 443 MALFNKMSIHDLEDVDLSYAPPYNSVW 469 (480)
T ss_dssp HHHHTTCBGGGGGGCCCCCCTTTCCSS
T ss_pred HHHHcCCCHHHHhhcccccCCCCCCch
Confidence 999999999999997 57999999765
No 137
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.13 E-value=4.3e-11 Score=145.61 Aligned_cols=154 Identities=14% Similarity=0.113 Sum_probs=117.4
Q ss_pred HhhhhhccccccccccCCceEEeccch------hhc---------cHHHH---hccccccccccccc-cccccccccCCc
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKW------TLL---------SLARV---LEGIEYKVGKFPFA-ANSRAKTNNDTD 429 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---------~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~ 429 (1074)
+++.+.+..++.+||+..+||..||.. .|- ...|+ +.++......++.. ..+....-+++.
T Consensus 279 ~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~ 358 (565)
T 3ntd_A 279 IGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGREERYQGTQGTAICKVFDLAV 358 (565)
T ss_dssp BCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEE
T ss_pred cCCCCCEEECCCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEcCcEE
Confidence 567778999999999999999999984 121 12232 55554433223221 122334568889
Q ss_pred ceEEEEeccCCCcccccccccCCCcEEEEeeccCccchhhhc-CCCcceEEEEEECCCCcEEEEEEeCCCh-hHHHHHHH
Q psy14927 430 GFVKVLGDKLTDKVLGVHIIGPGIEYKVGKFPFAANSRAKTN-NDTDGFVKVLGDKLTDKVLGVHIIGPAA-GELINEAV 507 (1074)
Q Consensus 430 ~~~~~~~~~~~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~-~~~~G~~Kli~~~~~~~ilG~~iiG~~a-~eli~~~a 507 (1074)
+.+++++.. +++.|+++.+..+ ...+++... +.+.||+|+++|+++++|||+|++|+++ +|+|+.++
T Consensus 359 ~~vG~~e~~---------a~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~ 427 (565)
T 3ntd_A 359 GATGKNEKQ---------LKQAGIAFEKVYV--HTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMA 427 (565)
T ss_dssp EEEECCHHH---------HHHTTCCCEEEEE--EEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHH
T ss_pred EEecCCHHH---------HHHcCCCeEEEEE--ecCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHH
Confidence 999988776 7777888877654 455677666 8889999999999999999999999999 99999999
Q ss_pred HHHHcCCCHHHHhhhccc-CCcccccc
Q psy14927 508 LAMEYGASCEDVARTCHA-HPTVCVEK 533 (1074)
Q Consensus 508 ~a~~~~~~~~~l~~~~~~-hPt~s~e~ 533 (1074)
+||+.|.|+++|.+++++ ||+++...
T Consensus 428 ~ai~~~~~~~~l~~~~~~~~P~~~~~~ 454 (565)
T 3ntd_A 428 VAQRAGMTVEQLQHLELSYAPPYGSAK 454 (565)
T ss_dssp HHHHTTCBHHHHTTCCCCCCTTTCCSS
T ss_pred HHHHcCCCHHHHhhhhhccCcccCchh
Confidence 999999999999999875 49887543
No 138
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.11 E-value=6.4e-11 Score=141.33 Aligned_cols=154 Identities=13% Similarity=0.008 Sum_probs=115.6
Q ss_pred HhhhhhccccccccccCCceEEeccchhh-----------cc----HHHH---hccccccccccc-cccccccccccCCc
Q psy14927 369 VDKYLEMKRNQSFRSSNTDIILPVEKWTL-----------LS----LARV---LEGIEYKVGKFP-FAANSRAKTNNDTD 429 (1074)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~----~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~ 429 (1074)
+++++.+..|+++||+..+||..||.... .. ..|+ ..++......++ ....+....-+++.
T Consensus 302 ~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~ 381 (490)
T 2bc0_A 302 LFRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTDLEGIGVQGSNGISIYGLHM 381 (490)
T ss_dssp BCTTSCBCCCTTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEE
T ss_pred cCCCCCEEECCCcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCCCCCCCcccceEEEECCcEe
Confidence 56677799999999999999999998431 11 2222 344432211111 11122223336777
Q ss_pred ceEEEEeccCCCcccccccccCCCcEEEEeeccCccchhhhcC--CCcceEEEEEECCCCcEEEEEEeCC-ChhHHHHHH
Q psy14927 430 GFVKVLGDKLTDKVLGVHIIGPGIEYKVGKFPFAANSRAKTNN--DTDGFVKVLGDKLTDKVLGVHIIGP-AAGELINEA 506 (1074)
Q Consensus 430 ~~~~~~~~~~~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~--~~~G~~Kli~~~~~~~ilG~~iiG~-~a~eli~~~ 506 (1074)
..+++.... ++..|+++.+. ++..+.|+..+. .+.|++|+++++++++|||+|++|+ +++|+|+.+
T Consensus 382 ~~vG~~~~~---------a~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~ 450 (490)
T 2bc0_A 382 VSTGLTLEK---------AKRLGFDAAVT--EYTDNQKPEFIEHGNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMF 450 (490)
T ss_dssp EEEECCHHH---------HHHTTCCEEEE--EEEEESSCTTCCSSCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHH
T ss_pred EEeeCCHHH---------HHHcCCceEEE--EEecCCcccccCCCCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHH
Confidence 777776554 66678788777 677788888764 7789999999999999999999999 899999999
Q ss_pred HHHHHcCCCHHHHhhh-cccCCcccccc
Q psy14927 507 VLAMEYGASCEDVART-CHAHPTVCVEK 533 (1074)
Q Consensus 507 a~a~~~~~~~~~l~~~-~~~hPt~s~e~ 533 (1074)
++||+.+.|+++|..+ +++|||+++..
T Consensus 451 ~~ai~~~~~~~~l~~~~~~~~Pt~~e~~ 478 (490)
T 2bc0_A 451 SLAIQEGVTIEKLALTDIFFLPHFNKPY 478 (490)
T ss_dssp HHHHHHTCBHHHHHHSCCCCCTTTCCTT
T ss_pred HHHHHcCCCHHHHhhcceecCCCCCchh
Confidence 9999999999999986 89999999775
No 139
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.09 E-value=3.7e-09 Score=121.27 Aligned_cols=246 Identities=14% Similarity=0.162 Sum_probs=142.9
Q ss_pred HhhhcCCHHHHHHHHHHcCcc------cchhhhHh--hhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHh
Q psy14927 5 ETMKNGDIDRAIRMFEKAETH------QQHVPRML--LENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEA 76 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a 76 (1074)
.+++.|+|++|+..|+.+-.. +.+...+| +++|..+++++.+++. .-|...|..+...|.|++|..+|.++
T Consensus 70 ~ae~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~pn~-~a~~~IGd~~~~~g~yeeA~~~Y~~a 148 (449)
T 1b89_A 70 AANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNN-AHIQQVGDRCYDEKMYDAAKLLYNNV 148 (449)
T ss_dssp ---------------------------------------CHHHHTTTTTCC-----------------CTTTHHHHHHHT
T ss_pred HHHhCCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHhCCHHHHHHHHcCCcH-HHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 467789999999977766533 12222344 5799999999987543 47777799999999999999999999
Q ss_pred hChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHH-----------------HHHHHhCChHHHHH
Q psy14927 77 RDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAI-----------------HFYSVAGSCGNAVR 139 (1074)
Q Consensus 77 ~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai-----------------~~y~~a~~~~~A~~ 139 (1074)
.+|..++.+|.++|++++|.+.+++.+++.....+..-|...|+++.|. ++|.+.|.|++|+.
T Consensus 149 ~n~~~LA~~L~~Lg~yq~AVea~~KA~~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~ 228 (449)
T 1b89_A 149 SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELIT 228 (449)
T ss_dssp TCHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hhHHHHHHHHHHhccHHHHHHHHHHcCCchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHH
Confidence 9999999999999999999999999999988899999999999776665 89999999999999
Q ss_pred HHHHh-C-------chHHHHHHhhhcCchhHHHHHHHHcc-------------CC-hhHHHHHHHHhCChHHHHHHHHhh
Q psy14927 140 LCKEQ-A-------LDDQLWNLALSAGPSEQIEAATYLET-------------IE-PDKAVLLYHKAGALHKALDLAFKL 197 (1074)
Q Consensus 140 la~~~-~-------~~~~~~~l~~~~~~~~~~~~A~~~e~-------------~~-~~~A~~ly~kaG~~~kAl~l~~~~ 197 (1074)
+-+.. + ++.++.-+-....|+-+.+.=+.|.+ -. +.+.+-+|.+-|.+..|+...++.
T Consensus 229 lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly~~~~e~d~A~~tm~~h 308 (449)
T 1b89_A 229 MLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNH 308 (449)
T ss_dssp HHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHhC
Confidence 88864 1 23333222233445444333333322 12 456777888888888888877774
Q ss_pred ccCCcchHHHHHHHHHHhcCCCh--hhHHHhhhhcchHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCCHHHHHH
Q psy14927 198 TLSNSGLVFQIKAMKCLLKSGDT--NKIIFFAGVSRMKEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKAPHLLAN 273 (1074)
Q Consensus 198 ~~~~~~~~~~~~a~k~l~~~~~~--~~~i~~a~~~r~~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~~~~aa~ 273 (1074)
+ ...| +...++.....+.+||.+|++|+... .|..+..+...-+..=.+....+
T Consensus 309 ~------------------~~a~~~~~f~~~~~kv~n~elyYkai~fyl~~----~p~~l~~ll~~l~~~ld~~r~v~ 364 (449)
T 1b89_A 309 P------------------TDAWKEGQFKDIITKVANVELYYRAIQFYLEF----KPLLLNDLLMVLSPRLDHTRAVN 364 (449)
T ss_dssp T------------------TTTCCHHHHHHHHHHCSSTHHHHHHHHHHHHH----CGGGHHHHHHHHGGGCCHHHHHH
T ss_pred C------------------hhhhhhHHHHHHHhchhHHHHHHHHHHHHHhc----CHHHHHHHHHHHHhccCcHHHHH
Confidence 2 2233 34566677778889999999988743 34444444333333333333333
No 140
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.05 E-value=4e-10 Score=142.75 Aligned_cols=154 Identities=13% Similarity=0.107 Sum_probs=119.6
Q ss_pred CHHHHHHHHHHcCcccchh-----------hhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh
Q psy14927 11 DIDRAIRMFEKAETHQQHV-----------PRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY 79 (1074)
Q Consensus 11 ~~~eA~~~Ye~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~ 79 (1074)
+++.+++++++.+.++... ..+.+++|+.+.++....+++.+|+++|++++..++++.|++||.+++||
T Consensus 631 ~~~~~~~~l~~~~~~~~a~~~~~~~~~~f~~~l~~~~~~~A~~~~~~~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~ 710 (814)
T 3mkq_A 631 SLTKIARFLEGQEYYEEALNISPDQDQKFELALKVGQLTLARDLLTDESAEMKWRALGDASLQRFNFKLAIEAFTNAHDL 710 (814)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHCCCHHHHHHHHHHHTCHHHHHHHHTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHhCCChHHheecCCCcchheehhhhcCCHHHHHHHHHhhCcHhHHHHHHHHHHHcCCHHHHHHHHHHccCh
Confidence 4455666666666554211 12334789999999999999999999999999999999999999999999
Q ss_pred hhhhhHhhccCCHHHHHHHHH---hcCChHHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhh
Q psy14927 80 LSMVRVLCFLQDFSRAAELAN---ASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALS 156 (1074)
Q Consensus 80 ~~~vr~l~~~~~~~~a~~i~~---~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~ 156 (1074)
.++.+++...|+.++..++++ ..++...|.++ |.+.|++++|+++|++.++|++|+.||++|+..++.+
T Consensus 711 ~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~---~~~~g~~~~a~~~~~~~~~~~~A~~lA~~~~~~~~~i----- 782 (814)
T 3mkq_A 711 ESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNA---YWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGLGDNEV----- 782 (814)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHH---HHHHTCHHHHHHHHHHTTCHHHHHHHHHHTTCCHHHH-----
T ss_pred hhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHH---HHHcCCHHHHHHHHHHcCChHHHHHHHHHhCCChHHH-----
Confidence 999999999999998877766 34555555444 6778999999999999999999999999997666222
Q ss_pred cCchhHHHHHHHHcc-CCh
Q psy14927 157 AGPSEQIEAATYLET-IEP 174 (1074)
Q Consensus 157 ~~~~~~~~~A~~~e~-~~~ 174 (1074)
++....++++|+. ++.
T Consensus 783 --~~~~~~~~~~L~~~~~~ 799 (814)
T 3mkq_A 783 --NDIVTKWKENLILNGKN 799 (814)
T ss_dssp --HHHHHHHHHHHHTTTCH
T ss_pred --HHHHHHHHHHHHhccch
Confidence 1233467777776 443
No 141
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.01 E-value=2.3e-09 Score=122.88 Aligned_cols=206 Identities=13% Similarity=0.074 Sum_probs=64.6
Q ss_pred HHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh---hhhhhHhhccCCHHHHHHHHHhc----CChHHHH
Q psy14927 37 TDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY---LSMVRVLCFLQDFSRAAELANAS----GDTAAAY 109 (1074)
Q Consensus 37 ~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~---~~~vr~l~~~~~~~~a~~i~~~~----~~~~~~~ 109 (1074)
.+++.++..+.++|.+|..+|+.+...|++++|+++|.++.|+ ..+++.++.+|++++|.+..+.. ++.....
T Consensus 19 ld~A~~fae~~~~~~vWs~La~A~l~~g~~~eAIdsfika~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~~~i~~ 98 (449)
T 1b89_A 19 LDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVET 98 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCccchhHH
Confidence 3444444444445667777777777777777777777777774 44444466677777776654422 1223344
Q ss_pred HHHHHHHhcCChHHHHHHHHHhC--ChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHcc-CChhHHHHHHHHhCC
Q psy14927 110 HLARQYENSGQFDEAIHFYSVAG--SCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLET-IEPDKAVLLYHKAGA 186 (1074)
Q Consensus 110 ~la~~~~~~g~~~~Ai~~y~~a~--~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~-~~~~~A~~ly~kaG~ 186 (1074)
.++..|.+.|++.++.+||...+ .|..--..|-..|++++...+-... +-+...|.-+-. +++++|+..|.||++
T Consensus 99 ~Li~~Y~Klg~l~e~e~f~~~pn~~a~~~IGd~~~~~g~yeeA~~~Y~~a--~n~~~LA~~L~~Lg~yq~AVea~~KA~~ 176 (449)
T 1b89_A 99 ELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV--SNFGRLASTLVHLGEYQAAVDGARKANS 176 (449)
T ss_dssp ----------CHHHHTTTTTCC----------------CTTTHHHHHHHT--TCHHHHHHHHHTTTCHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCHHHHHHHHcCCcHHHHHHHHHHHHHcCCHHHHHHHHHHh--hhHHHHHHHHHHhccHHHHHHHHHHcCC
Confidence 55666666666666666654321 2222222222333333332222111 122244444444 556666666666666
Q ss_pred h---HHHHHHHHhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcCCCCCChhHHHHHHHHHH
Q psy14927 187 L---HKALDLAFKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSSDWKSQPELLKSIISFYS 263 (1074)
Q Consensus 187 ~---~kAl~l~~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~ 263 (1074)
+ ..++..|.. .|+++.+ ......+ ...|+....++.+|.
T Consensus 177 ~~~Wk~v~~aCv~--------------------~~ef~lA----------------~~~~l~L--~~~ad~l~~lv~~Ye 218 (449)
T 1b89_A 177 TRTWKEVCFACVD--------------------GKEFRLA----------------QMCGLHI--VVHADELEELINYYQ 218 (449)
T ss_dssp HHHHHHHHHHHHH--------------------TTCHHHH----------------HHTTTTT--TTCHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHH--------------------cCcHHHH----------------HHHHHHH--HhCHhhHHHHHHHHH
Confidence 6 555555555 4555444 2333323 367788888999999
Q ss_pred ccCCHHHHHHHHHHHHhHH
Q psy14927 264 KGKAPHLLANFYVSCAQVE 282 (1074)
Q Consensus 264 k~~~~~~aa~~~~~~a~~e 282 (1074)
++|.|++|.+++...-..|
T Consensus 219 k~G~~eEai~lLe~aL~le 237 (449)
T 1b89_A 219 DRGYFEELITMLEAALGLE 237 (449)
T ss_dssp HTTCHHHHHHHHHHHTTST
T ss_pred HCCCHHHHHHHHHHHhCCc
Confidence 9999999999988886655
No 142
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.97 E-value=1.9e-07 Score=106.88 Aligned_cols=309 Identities=15% Similarity=0.098 Sum_probs=182.7
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhh-------Hhh--hcHHHHHHHhhc-----CCChHHHHHHHHHHHhccCHHHHH
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPR-------MLL--ENTDKLEKYIIQ-----SKDPVLLKWWAQYIESTEDMDLAM 70 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~-------~~~--~~~~~~~~~~~~-----~~~~~l~~~~a~~~e~~~~~~~A~ 70 (1074)
.+-+.|++++|++.|+++-..+..-+. +++ ++++++..+... +.++..|..+|..+...|++++|.
T Consensus 8 ~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~ 87 (388)
T 1w3b_A 8 REYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAI 87 (388)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHH
Confidence 456789999999999987544322221 112 356666555543 567889999999999999999999
Q ss_pred HHHHHhhC--------hhhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCChHHHHHHHHHhCCh---
Q psy14927 71 KYYEEARD--------YLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSC--- 134 (1074)
Q Consensus 71 ~~y~~a~d--------~~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~--- 134 (1074)
++|.++-. +..+..++...|++++|.+..+ .+.+......+|..+...|++++|+++|.++-..
T Consensus 88 ~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 167 (388)
T 1w3b_A 88 EHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 167 (388)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 99998632 3456677999999999988765 3556677889999999999999999998764211
Q ss_pred -----HHHHHHHHHhCchHHHHHHh---hhcCc---hhHHHHHHHHccCChhHHHHHHHHhCChHHHHHHHHhhcc--CC
Q psy14927 135 -----GNAVRLCKEQALDDQLWNLA---LSAGP---SEQIEAATYLETIEPDKAVLLYHKAGALHKALDLAFKLTL--SN 201 (1074)
Q Consensus 135 -----~~A~~la~~~~~~~~~~~l~---~~~~~---~~~~~~A~~~e~~~~~~A~~ly~kaG~~~kAl~l~~~~~~--~~ 201 (1074)
..--.+....|..+...... ....| +.+...| .+|...|++.+|+..+.+.-. ++
T Consensus 168 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg------------~~~~~~~~~~~A~~~~~~al~~~p~ 235 (388)
T 1w3b_A 168 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLG------------NVLKEARIFDRAVAAYLRALSLSPN 235 (388)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH------------HHHHTTTCTTHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHH------------HHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 11111111222222222111 11111 1122222 333334444444444433210 11
Q ss_pred cchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCCHHHHHHHHHHH---
Q psy14927 202 SGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKAPHLLANFYVSC--- 278 (1074)
Q Consensus 202 ~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~~~~aa~~~~~~--- 278 (1074)
+. ..+..-..++.+.|+.+.++.....+.. . ...+|.....+...|.+.|.+++|...|..+
T Consensus 236 ~~-~~~~~l~~~~~~~g~~~~A~~~~~~al~-------------~-~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 300 (388)
T 1w3b_A 236 HA-VVHGNLACVYYEQGLIDLAIDTYRRAIE-------------L-QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 300 (388)
T ss_dssp CH-HHHHHHHHHHHHTTCHHHHHHHHHHHHH-------------T-CSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred CH-HHHHHHHHHHHHcCCHHHHHHHHHHHHh-------------h-CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 10 1111223344556666665544332211 1 2334566667777788888888777655544
Q ss_pred -----------HhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhhcCChHHHhhHHHHHHHHH
Q psy14927 279 -----------AQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEIDEFGNYEKGLGALNEAKRCL 347 (1074)
Q Consensus 279 -----------a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 347 (1074)
+... ...|+|++|...+.++++. .|... .....+..++.+ .|+++.|+..|.++-.
T Consensus 301 ~p~~~~~~~~l~~~~-~~~g~~~~A~~~~~~al~~-------~p~~~--~~~~~l~~~~~~-~g~~~~A~~~~~~a~~-- 367 (388)
T 1w3b_A 301 CPTHADSLNNLANIK-REQGNIEEAVRLYRKALEV-------FPEFA--AAHSNLASVLQQ-QGKLQEALMHYKEAIR-- 367 (388)
T ss_dssp CTTCHHHHHHHHHHH-HTTTCHHHHHHHHHHHTTS-------CTTCH--HHHHHHHHHHHT-TTCCHHHHHHHHHHHT--
T ss_pred CcccHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhc-------CCCcH--HHHHHHHHHHHH-cCCHHHHHHHHHHHHh--
Confidence 4444 5678888888887777642 12111 112234556667 7999999999988754
Q ss_pred hhccCcc
Q psy14927 348 LKHNDSM 354 (1074)
Q Consensus 348 ~~~~~~~ 354 (1074)
..|+..
T Consensus 368 -~~p~~~ 373 (388)
T 1w3b_A 368 -ISPTFA 373 (388)
T ss_dssp -TCTTCH
T ss_pred -hCCCCH
Confidence 456544
No 143
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.93 E-value=6.8e-07 Score=108.46 Aligned_cols=321 Identities=12% Similarity=0.049 Sum_probs=179.0
Q ss_pred hhhcCCHHHHHHHHHHcCcccchh------hhHhh--hcHHHHHHHhhcC--C-------------------ChHHHHHH
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHV------PRMLL--ENTDKLEKYIIQS--K-------------------DPVLLKWW 56 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~------~~~~~--~~~~~~~~~~~~~--~-------------------~~~l~~~~ 56 (1074)
+...|++++|+.+|+++....... ..+|. ++++++..++.+. . +...|...
T Consensus 127 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 206 (597)
T 2xpi_A 127 YCCTGDYARAKCLLTKEDLYNRSSACRYLAAFCLVKLYDWQGALNLLGETNPFRKDEKNANKLLMQDGGIKLEASMCYLR 206 (597)
T ss_dssp HHHTTCHHHHHHHHHHTCGGGTCHHHHHHHHHHHHHTTCHHHHHHHHCSSCTTC----------CCCSSCCHHHHHHHHH
T ss_pred HHHcCcHHHHHHHHHHHhccccchhHHHHHHHHHHHHhhHHHHHHHHhccCCccccccccccccccccccchhHHHHHHH
Confidence 456788888888888874322111 33333 4777777777742 2 25577788
Q ss_pred HHHHHhccCHHHHHHHHHHhhChh----------------------------------------------hhhhHhhccC
Q psy14927 57 AQYIESTEDMDLAMKYYEEARDYL----------------------------------------------SMVRVLCFLQ 90 (1074)
Q Consensus 57 a~~~e~~~~~~~A~~~y~~a~d~~----------------------------------------------~~vr~l~~~~ 90 (1074)
+..+...|++++|.++|.++-... .++..|+..|
T Consensus 207 ~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g 286 (597)
T 2xpi_A 207 GQVYTNLSNFDRAKECYKEALMVDAKCYEAFDQLVSNHLLTADEEWDLVLKLNYSTYSKEDAAFLRSLYMLKLNKTSHED 286 (597)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCSCHHHHHHHHHHSCTHHHHGGGHHHHHHHHHTTSCTTTTHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCchhhHHHHHHHHhhcccchhHHHHHHhcCCcccccchHHHHHHHHHHHHHHHcCcc
Confidence 888889999999999888863211 1144466778
Q ss_pred CHHHHHHHHHh----cCChHHHHHHHHHHHhcCChHHHHHHHHHhC--------ChHHHHHHHHHhCchHHHHHHhh---
Q psy14927 91 DFSRAAELANA----SGDTAAAYHLARQYENSGQFDEAIHFYSVAG--------SCGNAVRLCKEQALDDQLWNLAL--- 155 (1074)
Q Consensus 91 ~~~~a~~i~~~----~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~--------~~~~A~~la~~~~~~~~~~~l~~--- 155 (1074)
++++|.++.++ ..+......++..|.+.|++++|+++|.++- .|..-+.+..+.|..++...+..
T Consensus 287 ~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~ 366 (597)
T 2xpi_A 287 ELRRAEDYLSSINGLEKSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYLISNDLV 366 (597)
T ss_dssp HHHHHHHHHHTSTTGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhcCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 88888888774 2567778889999999999999988887642 12223333334444444333321
Q ss_pred hcCc---hhHHHHHHHHcc-CChhHHHH---------------------HHHHhCChHHHHHHHHhhccCC-cchHHHHH
Q psy14927 156 SAGP---SEQIEAATYLET-IEPDKAVL---------------------LYHKAGALHKALDLAFKLTLSN-SGLVFQIK 209 (1074)
Q Consensus 156 ~~~~---~~~~~~A~~~e~-~~~~~A~~---------------------ly~kaG~~~kAl~l~~~~~~~~-~~~~~~~~ 209 (1074)
...+ ..+...+..+.. +++++|.. .|.+.|++.+|++++.+.-..+ .....+..
T Consensus 367 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~ 446 (597)
T 2xpi_A 367 DRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLF 446 (597)
T ss_dssp HHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHH
T ss_pred hhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHH
Confidence 1111 112222222222 33333333 3334455555555544321100 00011111
Q ss_pred HHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCCHHHHHHHHHHH-----------
Q psy14927 210 AMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKAPHLLANFYVSC----------- 278 (1074)
Q Consensus 210 a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~~~~aa~~~~~~----------- 278 (1074)
-..++.+.|+.++++.+...+.. . ...+|.....+...|.+.|.+++|..++..+
T Consensus 447 l~~~~~~~g~~~~A~~~~~~~~~-------------~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p 512 (597)
T 2xpi_A 447 LGMQHMQLGNILLANEYLQSSYA-------------L-FQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNE 512 (597)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH-------------H-CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCS
T ss_pred HHHHHHHcCCHHHHHHHHHHHHH-------------h-CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccch
Confidence 22233344444444433332211 1 1234555666667777777777766555554
Q ss_pred ----------HhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhhcCChHHHhhHHHHHHHHHh
Q psy14927 279 ----------AQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEIDEFGNYEKGLGALNEAKRCLL 348 (1074)
Q Consensus 279 ----------a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 348 (1074)
+... ...|+|+.|...+.++++.- ...+ .....+..+|.+ .|+++.|...|.++-..
T Consensus 513 ~~~~~~~~~l~~~~-~~~g~~~~A~~~~~~~~~~~----p~~~-----~~~~~l~~~~~~-~g~~~~A~~~~~~~l~~-- 579 (597)
T 2xpi_A 513 KPWAATWANLGHAY-RKLKMYDAAIDALNQGLLLS----TNDA-----NVHTAIALVYLH-KKIPGLAITHLHESLAI-- 579 (597)
T ss_dssp GGGHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHS----SCCH-----HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH--
T ss_pred hhHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHhC----CCCh-----HHHHHHHHHHHH-hCCHHHHHHHHHHHHhc--
Confidence 3333 45688888888888776542 1112 122234566777 79999999999887554
Q ss_pred hccCcc
Q psy14927 349 KHNDSM 354 (1074)
Q Consensus 349 ~~~~~~ 354 (1074)
.|++.
T Consensus 580 -~p~~~ 584 (597)
T 2xpi_A 580 -SPNEI 584 (597)
T ss_dssp -CTTCH
T ss_pred -CCCCh
Confidence 56543
No 144
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=98.88 E-value=1.2e-08 Score=101.85 Aligned_cols=121 Identities=13% Similarity=0.077 Sum_probs=101.6
Q ss_pred hcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHH---hcCChHHHHHH
Q psy14927 35 ENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELAN---ASGDTAAAYHL 111 (1074)
Q Consensus 35 ~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~---~~~~~~~~~~l 111 (1074)
++++.+.++....+++..|+++|+.+.++|+++.|++||.++||+.++--+|.-.|+.++..++++ ..++...+++.
T Consensus 19 g~l~~A~e~a~~l~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~iA~~~g~~n~af~~ 98 (177)
T 3mkq_B 19 GNLDAALDEAKKLNDSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLLN 98 (177)
T ss_dssp TCHHHHHHHHHHHCCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHHhCCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHHHCccHHHHHHH
Confidence 466666666666678999999999999999999999999999999887777999999998888776 34555555554
Q ss_pred HHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcC
Q psy14927 112 ARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAG 158 (1074)
Q Consensus 112 a~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~ 158 (1074)
+.-.||+++++++|+++|+|.+|.-+|+.+|..+..-++....+
T Consensus 99 ---~l~lGdv~~~i~lL~~~~r~~eA~~~A~t~g~~~~a~~~~~~~~ 142 (177)
T 3mkq_B 99 ---TFYNNSTKERSSIFAEGGSLPLAYAVAKANGDEAAASAFLEQAE 142 (177)
T ss_dssp ---HHHHTCHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred ---HHHcCCHHHHHHHHHHCCChHHHHHHHHHcCcHHHHHHHHHHhC
Confidence 45689999999999999999999999999999888877765433
No 145
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.87 E-value=3.8e-06 Score=101.78 Aligned_cols=310 Identities=14% Similarity=0.049 Sum_probs=165.8
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhh-------ChhhhhhHhhccCCHHHHHHHHHh--cCC----------------
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEAR-------DYLSMVRVLCFLQDFSRAAELANA--SGD---------------- 104 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~-------d~~~~vr~l~~~~~~~~a~~i~~~--~~~---------------- 104 (1074)
+..+..+++.+...|++++|.+.|.++- -+..++++|+..|++++|.++..+ +..
T Consensus 117 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (597)
T 2xpi_A 117 PNDAFWLAQVYCCTGDYARAKCLLTKEDLYNRSSACRYLAAFCLVKLYDWQGALNLLGETNPFRKDEKNANKLLMQDGGI 196 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTCGGGTCHHHHHHHHHHHHHTTCHHHHHHHHCSSCTTC----------CCCSSC
T ss_pred chHHHHHHHHHHHcCcHHHHHHHHHHHhccccchhHHHHHHHHHHHHhhHHHHHHHHhccCCcccccccccccccccccc
Confidence 4556667888888888888888888762 124556668888888888887762 222
Q ss_pred ---hHHHHHHHHHHHhcCChHHHHHHHHHhC-----ChHHHHHHHHHhCchHH--------------------H-----H
Q psy14927 105 ---TAAAYHLARQYENSGQFDEAIHFYSVAG-----SCGNAVRLCKEQALDDQ--------------------L-----W 151 (1074)
Q Consensus 105 ---~~~~~~la~~~~~~g~~~~Ai~~y~~a~-----~~~~A~~la~~~~~~~~--------------------~-----~ 151 (1074)
....+.++..|.+.|++++|+++|.++- .++--..++.-.-.... . .
T Consensus 197 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 276 (597)
T 2xpi_A 197 KLEASMCYLRGQVYTNLSNFDRAKECYKEALMVDAKCYEAFDQLVSNHLLTADEEWDLVLKLNYSTYSKEDAAFLRSLYM 276 (597)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCSCHHHHHHHHHHSCTHHHHGGGHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCchhhHHHHHHHHhhcccchhHHHHHHhcCCcccccchHHHHHHHHH
Confidence 4567788888888888888888887652 22221222211100000 0 0
Q ss_pred HHhhh-cCchhHHHHHHHHcc-C----C---hhHHHHHHHHhCChHHHHHHHHhhcc---CC------------------
Q psy14927 152 NLALS-AGPSEQIEAATYLET-I----E---PDKAVLLYHKAGALHKALDLAFKLTL---SN------------------ 201 (1074)
Q Consensus 152 ~l~~~-~~~~~~~~~A~~~e~-~----~---~~~A~~ly~kaG~~~kAl~l~~~~~~---~~------------------ 201 (1074)
.++.. .....+.++-.+|++ . + +..-+..|.+.|++.+|++++.+.-. .+
T Consensus 277 ~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 356 (597)
T 2xpi_A 277 LKLNKTSHEDELRRAEDYLSSINGLEKSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKN 356 (597)
T ss_dssp TTSCTTTTHHHHHHHHHHHHTSTTGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCHH
T ss_pred HHHHHHcCcchHHHHHHHHHHhhcCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCHH
Confidence 00000 011112222223322 0 0 12233344444555555444443210 00
Q ss_pred --------------cchHHHHHHHHHHhcCCChhhHHHhhhhc-----chHHHHHH-------------HHHHHhcC--C
Q psy14927 202 --------------SGLVFQIKAMKCLLKSGDTNKIIFFAGVS-----RMKEIYVM-------------AANYLQSS--D 247 (1074)
Q Consensus 202 --------------~~~~~~~~a~k~l~~~~~~~~~i~~a~~~-----r~~~l~~~-------------aa~yl~~~--~ 247 (1074)
.....+..-..++.+.|+.++++.+...+ .....|.. |..+++.. .
T Consensus 357 ~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 436 (597)
T 2xpi_A 357 KLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARL 436 (597)
T ss_dssp HHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 00011222234456667776665554432 12333333 33333221 1
Q ss_pred CCCChhHHHHHHHHHHccCCHHHHHHHHHHH--------------HhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHH
Q psy14927 248 WKSQPELLKSIISFYSKGKAPHLLANFYVSC--------------AQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYET 313 (1074)
Q Consensus 248 ~~~~~~~~~~i~~~Y~k~~~~~~aa~~~~~~--------------a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~ 313 (1074)
...++.....+...|.+.|.+++|...+..+ +... ...|+|++|...+.++++...+.+......
T Consensus 437 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~ 515 (597)
T 2xpi_A 437 FQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVA-FNKSDMQTAINHFQNALLLVKKTQSNEKPW 515 (597)
T ss_dssp TTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHSCCCSGGG
T ss_pred CccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH-HHhCCHHHHHHHHHHHHHhhhccccchhhH
Confidence 2335566677788888999998887666554 3344 456899999999999888776644332210
Q ss_pred HHHHHHHHHHHHHHhhcCChHHHhhHHHHHHHHHhhccCcchhHHHHHHHHHHHH
Q psy14927 314 LKSSVVEKLAEVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKIAE 368 (1074)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 368 (1074)
. .....+..++.+ .|+++.|...+.++-.. .|++.. ++ .....++.+
T Consensus 516 ~--~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~---~p~~~~-~~-~~l~~~~~~ 562 (597)
T 2xpi_A 516 A--ATWANLGHAYRK-LKMYDAAIDALNQGLLL---STNDAN-VH-TAIALVYLH 562 (597)
T ss_dssp H--HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH---SSCCHH-HH-HHHHHHHHH
T ss_pred H--HHHHHHHHHHHH-hcCHHHHHHHHHHHHHh---CCCChH-HH-HHHHHHHHH
Confidence 0 112234556667 69999999999887654 465543 22 225555543
No 146
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.82 E-value=1.8e-06 Score=95.12 Aligned_cols=272 Identities=16% Similarity=0.137 Sum_probs=160.8
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCC----hHHHHHHHHHHHhccCHHHHHHHHHHhhCh-
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKD----PVLLKWWAQYIESTEDMDLAMKYYEEARDY- 79 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~- 79 (1074)
.+...|++++|+.+|+++-..+ +++ ..++..+|..+...|++++|.++|.++-+.
T Consensus 14 ~~~~~g~~~~A~~~~~~al~~~--------------------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 73 (338)
T 3ro2_A 14 RLCKSGDCRAGVSFFEAAVQVG--------------------TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 73 (338)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC--------------------CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHhhC--------------------cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 4567899999999999876432 112 246677788888899999999888775433
Q ss_pred -------------hhhhhHhhccCCHHHHHHHHHh-------cCC----hHHHHHHHHHHHhcCC---------------
Q psy14927 80 -------------LSMVRVLCFLQDFSRAAELANA-------SGD----TAAAYHLARQYENSGQ--------------- 120 (1074)
Q Consensus 80 -------------~~~vr~l~~~~~~~~a~~i~~~-------~~~----~~~~~~la~~~~~~g~--------------- 120 (1074)
..+.+++..+|++++|.+..++ .++ ..+...+|..|...|+
T Consensus 74 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T 3ro2_A 74 RTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPE 153 (338)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCH
T ss_pred hcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhh
Confidence 3344557778888888776553 233 2256688899999999
Q ss_pred -----hHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHcc-CChhHHHHHHHHhCChHHHHHHH
Q psy14927 121 -----FDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLET-IEPDKAVLLYHKAGALHKALDLA 194 (1074)
Q Consensus 121 -----~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~-~~~~~A~~ly~kaG~~~kAl~l~ 194 (1074)
+++|+++| ++|+.+++..+...... ..+...|..+.. +++++|..+|.+ |++++
T Consensus 154 ~a~~~~~~A~~~~------~~a~~~~~~~~~~~~~~--------~~~~~l~~~~~~~~~~~~A~~~~~~------a~~~~ 213 (338)
T 3ro2_A 154 DVRNALQAAVDLY------EENLSLVTALGDRAAQG--------RAFGNLGNTHYLLGNFRDAVIAHEQ------RLLIA 213 (338)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHHHHTCHHHHH--------HHHHHHHHHHHHHTCHHHHHHHHHH------HHHHH
T ss_pred hHHHHHHHHHHHH------HHHHHHHHhcCCHHHHH--------HHHHHHHHHHHHhCCHHHHHHHHHH------HHHHH
Confidence 77777766 45666666553222111 112233433333 555555555533 23332
Q ss_pred HhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcC-CCCCChhHHHHHHHHHHccCCHHHHHH
Q psy14927 195 FKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSS-DWKSQPELLKSIISFYSKGKAPHLLAN 273 (1074)
Q Consensus 195 ~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~-~~~~~~~~~~~i~~~Y~k~~~~~~aa~ 273 (1074)
-+ .++... ....+...+..+... +++.-...+..++......+.....+.
T Consensus 214 ~~--------------------~~~~~~---------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 264 (338)
T 3ro2_A 214 KE--------------------FGDKAA---------ERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQ 264 (338)
T ss_dssp HH--------------------HTCHHH---------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred Hh--------------------cCChHH---------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 22 111110 011122222222221 111112333444445555555555667
Q ss_pred HHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhhcCChHHHhhHHHHHHHHHhhc
Q psy14927 274 FYVSCAQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEIDEFGNYEKGLGALNEAKRCLLKH 350 (1074)
Q Consensus 274 ~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 350 (1074)
.+...+... ...|+|++|...+.+++......+.... .......+..+|.+ .|+++.|...+.++-....+.
T Consensus 265 ~~~~la~~~-~~~g~~~~A~~~~~~a~~~~~~~~~~~~---~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~~~~ 336 (338)
T 3ro2_A 265 SCYSLGNTY-TLLQDYEKAIDYHLKHLAIAQELKDRIG---EGRACWSLGNAYTA-LGNHDQAMHFAEKHLEISREV 336 (338)
T ss_dssp HHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHHTCHHH---HHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHhcCCcHH---HHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHhh
Confidence 777778887 8889999999999999998877654211 12223345677778 799999999999887765443
No 147
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.82 E-value=5.3e-07 Score=103.76 Aligned_cols=273 Identities=15% Similarity=0.132 Sum_probs=161.5
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCCh----HHHHHHHHHHHhccCHHHHHHHHHHhhCh--
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDP----VLLKWWAQYIESTEDMDLAMKYYEEARDY-- 79 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~a~~~e~~~~~~~A~~~y~~a~d~-- 79 (1074)
+...|++++|+.+|+++-... ++++ .++..+|..+...|++++|.++|.++-..
T Consensus 58 ~~~~g~~~~A~~~~~~al~~~--------------------~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 117 (411)
T 4a1s_A 58 LCNAGDCRAGVAFFQAAIQAG--------------------TEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAK 117 (411)
T ss_dssp HHHTTCHHHHHHHHHHHHHHC--------------------CSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHhCcHHHHHHHHHHHHHhc--------------------ccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 456677777777777765322 2233 46777888888999999999988776443
Q ss_pred ------------hhhhhHhhccCCHHHHHHHHHh-------cCC----hHHHHHHHHHHHhcCC----------------
Q psy14927 80 ------------LSMVRVLCFLQDFSRAAELANA-------SGD----TAAAYHLARQYENSGQ---------------- 120 (1074)
Q Consensus 80 ------------~~~vr~l~~~~~~~~a~~i~~~-------~~~----~~~~~~la~~~~~~g~---------------- 120 (1074)
..+..++..+|++++|.+..++ .++ ..+...+|..|...|+
T Consensus 118 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~ 197 (411)
T 4a1s_A 118 SMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKE 197 (411)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHH
T ss_pred HccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhH
Confidence 2344556778888888776552 122 2356688899999999
Q ss_pred -hHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHcc-CChhHHHHHHHHhCChHHHHHHHHhhc
Q psy14927 121 -FDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLET-IEPDKAVLLYHKAGALHKALDLAFKLT 198 (1074)
Q Consensus 121 -~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~-~~~~~A~~ly~kaG~~~kAl~l~~~~~ 198 (1074)
+++|+++|. +|+++++..+...... ..+...|..+.. +++++|..+|.+ |++++-+
T Consensus 198 ~~~~A~~~~~------~al~~~~~~~~~~~~~--------~~~~~la~~~~~~g~~~~A~~~~~~------al~~~~~-- 255 (411)
T 4a1s_A 198 ALTRAVEFYQ------ENLKLMRDLGDRGAQG--------RACGNLGNTYYLLGDFQAAIEHHQE------RLRIARE-- 255 (411)
T ss_dssp HHHHHHHHHH------HHHHHHHHHTCHHHHH--------HHHHHHHHHHHHTTCHHHHHHHHHH------HHHHHHH--
T ss_pred HHHHHHHHHH------HHHHHHHHcCCHHHHH--------HHHHHHHHHHHHcCChHHHHHHHHH------HHHHHHh--
Confidence 777776654 4666666553222111 112233433333 455555555443 2333222
Q ss_pred cCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcC-CCCCChhHHHHHHHHHHccCCHHHHHHHHHH
Q psy14927 199 LSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSS-DWKSQPELLKSIISFYSKGKAPHLLANFYVS 277 (1074)
Q Consensus 199 ~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~-~~~~~~~~~~~i~~~Y~k~~~~~~aa~~~~~ 277 (1074)
.++.. ....++...+..+... +++.--..++.++..+...+.....+..+..
T Consensus 256 ------------------~~~~~---------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 308 (411)
T 4a1s_A 256 ------------------FGDRA---------AERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYS 308 (411)
T ss_dssp ------------------HTCHH---------HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ------------------cCCcH---------HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 11111 0111233333333332 1222223334444455554555555677777
Q ss_pred HHhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhhcCChHHHhhHHHHHHHHHhhccC
Q psy14927 278 CAQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEIDEFGNYEKGLGALNEAKRCLLKHND 352 (1074)
Q Consensus 278 ~a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 352 (1074)
.+... ...|+|++|...+.+++....+.+.... .......+..+|.+ .|+++.|...|.++-....+..+
T Consensus 309 la~~~-~~~g~~~~A~~~~~~al~~~~~~~~~~~---~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~ 378 (411)
T 4a1s_A 309 LGNTY-TLLHEFNTAIEYHNRHLAIAQELGDRIG---EARACWSLGNAHSA-IGGHERALKYAEQHLQLAXXXXX 378 (411)
T ss_dssp HHHHH-HHTTCHHHHHHHHHHHHHHHHHHTCHHH---HHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHH-HHcCCHHHHHHHHHHHHHHHHHCCChHH---HHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHhhccc
Confidence 78887 7889999999999999998887653211 12222345677778 79999999999998887555443
No 148
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.81 E-value=3.5e-12 Score=143.95 Aligned_cols=221 Identities=11% Similarity=0.020 Sum_probs=118.9
Q ss_pred hhhhhhccccchHHHHHHHhh-------hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEe
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKIT 867 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~i 867 (1074)
.+|+||||||||++||++|++ ++||+.+.+|+.+......... ..+......++...||+|..+...
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~----~~l~~~~~~~~~e~Gv~~~~~~~~-- 139 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSA----MVMRKPAHLFLQELEIPYEDEGDY-- 139 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCC----EEEETTTHHHHHHTTCCCEECSSE--
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCH----HHHHHHHHHHHHHcCCEEEECCcc--
Confidence 349999999999999999964 7999998888877554332221 122233455667788887665211
Q ss_pred cCCeEEEEeCCCCeeEEEcCeEEEccCCCCC--CCCCCCCCC----cceechhhHhcchH--------------hhHHhh
Q psy14927 868 GPNTVTVIKSDGSTEEVKTKNILIATGSEVT--PFPGIEVDE----ETIVSSTGALSLKK--------------GSVWGR 927 (1074)
Q Consensus 868 d~~~~~v~~~~G~~~~i~~d~lIIATG~~p~--~ipgi~~~~----~~v~t~~~~~~~~~--------------A~~l~~ 927 (1074)
....+.+++++|..+. .+||..... ..+.+++....... |..+..
T Consensus 140 ---------------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~ 204 (326)
T 3fpz_A 140 ---------------VVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQC 204 (326)
T ss_dssp ---------------EEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSS
T ss_pred ---------------eecceeEEEEcchhhhccccccceeecccccceeeccCCcccCCCEEEEEccCceeeehhhhhhh
Confidence 1223334444444331 233321000 01111111111111 555566
Q ss_pred cCCcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccC
Q psy14927 928 LGAEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVG 1007 (1074)
Q Consensus 928 ~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G 1007 (1074)
.+.+++++.+.......... ... .. .+....+....... .+....+.+|.++.+.|
T Consensus 205 ~~~~v~i~~~~~~~~~~~~~-----------~~~-~~-----~~~~~~g~~~~~~~-------~~~~~~~~~~~~~~~~g 260 (326)
T 3fpz_A 205 AMDPNVIELAGYKNDGTRDL-----------SQK-HG-----VILSTTGHDGPFGA-------FCAKRIVDIDQNQKLGG 260 (326)
T ss_dssp CCCCEEEEESCBCTTSSBCT-----------TSC-CC-----EEEECCCSCSSSCS-------HHHHHHHHHCTTCCCCC
T ss_pred ccCcEEEEeecccccccccc-----------eee-cc-----eEEEEecceeeEee-------cceeEEEecCceeeecc
Confidence 77888888776654411100 000 00 11111111100000 01123455666666667
Q ss_pred CcccCCccCccccCcccCCCCCeeeCCCCCCCCCCEEEecccCC--------CCCcHHHHHHHHHHHHHHhh
Q psy14927 1008 RRPYTHNLGLEEIGIEKDEKGRVPVNSRFQTVIPNIFAIGDCIH--------GPMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1008 ~~p~~~~l~l~~~gl~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~--------~~~~~~~A~~~G~~aA~~I~ 1071 (1074)
.+|... .+. .+.|.+|..++|++|||||+||+++ +| ....++.+|+.||..|+
T Consensus 261 ~~~~~~---------~~~-e~~iv~~~~~~t~vpGv~aaGDaa~~v~g~~rmGp-~~g~mi~SG~~AAe~I~ 321 (326)
T 3fpz_A 261 MKGLDM---------NHA-EHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGP-TFGAMALSGVHAAEQIL 321 (326)
T ss_dssp CCCBCH---------HHH-HHHHHHHCEECTTSBTEEECTHHHHHHHTCCBCCS-CCHHHHHHHHHHHHHHH
T ss_pred eecccc---------ccc-CCeEEECCCeEECCCCEEEEchHhccccCCCcCch-HHHHHHHHHHHHHHHHH
Confidence 666432 111 2457778888999999999999875 23 34456788999999886
No 149
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.79 E-value=3.5e-06 Score=96.17 Aligned_cols=274 Identities=17% Similarity=0.152 Sum_probs=168.0
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCC----hHHHHHHHHHHHhccCHHHHHHHHHHhhCh-
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKD----PVLLKWWAQYIESTEDMDLAMKYYEEARDY- 79 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~- 79 (1074)
.+...|++++|+.+|+++-... +++ ..++..+|..+...|++++|..+|.++-+.
T Consensus 18 ~~~~~g~~~~A~~~~~~al~~~--------------------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 77 (406)
T 3sf4_A 18 RLCKSGDCRAGVSFFEAAVQVG--------------------TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 77 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC--------------------CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHhcC--------------------cccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 4567789999999998876332 122 246778899999999999999988875332
Q ss_pred -------------hhhhhHhhccCCHHHHHHHHHh-------cCC----hHHHHHHHHHHHhcCC---------------
Q psy14927 80 -------------LSMVRVLCFLQDFSRAAELANA-------SGD----TAAAYHLARQYENSGQ--------------- 120 (1074)
Q Consensus 80 -------------~~~vr~l~~~~~~~~a~~i~~~-------~~~----~~~~~~la~~~~~~g~--------------- 120 (1074)
..+..++..+|++++|.+..++ .++ ..+...+|..|...|+
T Consensus 78 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~ 157 (406)
T 3sf4_A 78 RTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPE 157 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCH
T ss_pred HhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhh
Confidence 3345567778888888876542 233 2356688899999999
Q ss_pred -----hHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHcc-CChhHHHHHHHHhCChHHHHHHH
Q psy14927 121 -----FDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLET-IEPDKAVLLYHKAGALHKALDLA 194 (1074)
Q Consensus 121 -----~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~-~~~~~A~~ly~kaG~~~kAl~l~ 194 (1074)
+++|+++| ++|+++++..+...... ..+...|..+.. +++++|..+|.+ |++++
T Consensus 158 ~a~~~~~~A~~~~------~~al~~~~~~~~~~~~~--------~~~~~la~~~~~~g~~~~A~~~~~~------al~~~ 217 (406)
T 3sf4_A 158 EVRDALQAAVDFY------EENLSLVTALGDRAAQG--------RAFGNLGNTHYLLGNFRDAVIAHEQ------RLLIA 217 (406)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHHHTTCHHHHH--------HHHHHHHHHHHHHTBHHHHHHHHHH------HHHHH
T ss_pred hHHHHHHHHHHHH------HHHHHHHHhccCcHHHH--------HHHHHHHHHHHHccCHHHHHHHHHH------HHHHH
Confidence 77777766 45566666653222111 112233333333 445555554432 23332
Q ss_pred HhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcC-CCCCChhHHHHHHHHHHccCCHHHHHH
Q psy14927 195 FKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSS-DWKSQPELLKSIISFYSKGKAPHLLAN 273 (1074)
Q Consensus 195 ~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~-~~~~~~~~~~~i~~~Y~k~~~~~~aa~ 273 (1074)
-+ .++... ....+...+..+... +++..-..+..++..+...+.....+.
T Consensus 218 ~~--------------------~~~~~~---------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 268 (406)
T 3sf4_A 218 KE--------------------FGDKAA---------ERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQ 268 (406)
T ss_dssp HH--------------------TTCHHH---------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred Hh--------------------cCCcHH---------HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHH
Confidence 22 222111 011223333333222 122222334444555555555555677
Q ss_pred HHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhhcCChHHHhhHHHHHHHHHhhccC
Q psy14927 274 FYVSCAQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEIDEFGNYEKGLGALNEAKRCLLKHND 352 (1074)
Q Consensus 274 ~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 352 (1074)
.+...+... ...|+|++|...+.+++....+.+.... .......+..+|.+ .|+++.|+..+.++-....+.++
T Consensus 269 ~~~~la~~~-~~~g~~~~A~~~~~~a~~~~~~~~~~~~---~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~ 342 (406)
T 3sf4_A 269 SCYSLGNTY-TLLQDYEKAIDYHLKHLAIAQELNDRIG---EGRACWSLGNAYTA-LGNHDQAMHFAEKHLEISREVGD 342 (406)
T ss_dssp HHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHTTCHHH---HHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHH-HHhCcHHHHHHHHHHHHHHHHhcCCcHH---HHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhcC
Confidence 777888887 7889999999999999998887654211 12222345677778 79999999999999988777754
No 150
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.79 E-value=2.8e-09 Score=123.44 Aligned_cols=100 Identities=12% Similarity=0.086 Sum_probs=67.2
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccccc--------h-------hhhhh----hhh---------H--
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLN--------L-------ETMMG----TKS---------A-- 839 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~--------~-------~~~~~----~~~---------~-- 839 (1074)
.+|+||||||+|+.+|+.+++ +++|+.+..+..+. + ..+.. ... .
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 359999999999999999998 78888765432110 0 00000 000 0
Q ss_pred ----------------------HHhhhhhhHHHHhhhCCeEEEee-eEEEec------CCeEEEEeCCCCeeEEEcCeEE
Q psy14927 840 ----------------------AVKALTGGIAHLFKSNKVTQLNG-HGKITG------PNTVTVIKSDGSTEEVKTKNIL 890 (1074)
Q Consensus 840 ----------------------~~~~l~~~~~~~l~~~gV~~~~g-~v~~id------~~~~~v~~~~G~~~~i~~d~lI 890 (1074)
....+...+.+.+++.||+++.+ .|+.+. .+.+.|.+.+| ++.+|+||
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g---~i~ad~VV 161 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST---QWQCKNLI 161 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE---EEEESEEE
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC---EEECCEEE
Confidence 11334455677777889999999 466554 34567776665 69999999
Q ss_pred EccCCCC
Q psy14927 891 IATGSEV 897 (1074)
Q Consensus 891 IATG~~p 897 (1074)
+|||+.+
T Consensus 162 lAtG~~s 168 (401)
T 2gqf_A 162 VATGGLS 168 (401)
T ss_dssp ECCCCSS
T ss_pred ECCCCcc
Confidence 9999987
No 151
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.74 E-value=9.9e-07 Score=100.89 Aligned_cols=273 Identities=14% Similarity=0.064 Sum_probs=164.0
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHh---------hhcHHHHHHHhhc-----CCChHHHHHHHHHHHhccCHHHHHH
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRML---------LENTDKLEKYIIQ-----SKDPVLLKWWAQYIESTEDMDLAMK 71 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~---------~~~~~~~~~~~~~-----~~~~~l~~~~a~~~e~~~~~~~A~~ 71 (1074)
+...|++++|+.+|+++-..+...+..+ .+++.++.++..+ ++++..+..+|..+...|++++|.+
T Consensus 43 ~~~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~ 122 (388)
T 1w3b_A 43 HFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQ 122 (388)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHH
Confidence 3467999999999998765554333333 1467766666554 5677789999999999999999999
Q ss_pred HHHHhhCh--------hhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCChHHHHHHHHHhCChHHHH
Q psy14927 72 YYEEARDY--------LSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSCGNAV 138 (1074)
Q Consensus 72 ~y~~a~d~--------~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~ 138 (1074)
+|.++-.. ..+..++..+|++++|.+..+ .+.+..+...+|..|...|++++|+++|.++-..+
T Consensus 123 ~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--- 199 (388)
T 1w3b_A 123 AYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD--- 199 (388)
T ss_dssp HHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC---
Confidence 99986432 345667888999999998765 34567788899999999999999999987752211
Q ss_pred HHHHHhCchHHHHHHhhh-cCchhHHHHHHHHcc------CC---hhHHHHHHHHhCChHHHHHHHHhhccCCcc-hHHH
Q psy14927 139 RLCKEQALDDQLWNLALS-AGPSEQIEAATYLET------IE---PDKAVLLYHKAGALHKALDLAFKLTLSNSG-LVFQ 207 (1074)
Q Consensus 139 ~la~~~~~~~~~~~l~~~-~~~~~~~~~A~~~e~------~~---~~~A~~ly~kaG~~~kAl~l~~~~~~~~~~-~~~~ 207 (1074)
-+..+.+..++.. .....+.++-.+|++ .+ +..-+..|.+.|++.+|++.+.+.-..+.. ...+
T Consensus 200 -----p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 274 (388)
T 1w3b_A 200 -----PNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAY 274 (388)
T ss_dssp -----TTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHH
T ss_pred -----CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH
Confidence 1111112222100 000000111111110 11 123445666666777776666553211111 0012
Q ss_pred HHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCCHHHHHHHHHHH---------
Q psy14927 208 IKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKAPHLLANFYVSC--------- 278 (1074)
Q Consensus 208 ~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~~~~aa~~~~~~--------- 278 (1074)
..-..++.+.|+.++++.+...+.. . ...++.....+..+|.+.|.+++|..++..+
T Consensus 275 ~~l~~~~~~~g~~~~A~~~~~~al~---------~-----~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 340 (388)
T 1w3b_A 275 CNLANALKEKGSVAEAEDCYNTALR---------L-----CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAA 340 (388)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHH---------H-----CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHh---------h-----CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHH
Confidence 2223455667777776655443321 1 1234455555666666666666666555443
Q ss_pred -----HhHHHHhhcCHHHHHHHHHHHHH
Q psy14927 279 -----AQVEIDEFGNYEKGLGALNEAKR 301 (1074)
Q Consensus 279 -----a~~ei~e~~~y~~a~~~l~~a~~ 301 (1074)
+..- ..-|+|++|...+.++++
T Consensus 341 ~~~~l~~~~-~~~g~~~~A~~~~~~a~~ 367 (388)
T 1w3b_A 341 AHSNLASVL-QQQGKLQEALMHYKEAIR 367 (388)
T ss_dssp HHHHHHHHH-HTTTCCHHHHHHHHHHHT
T ss_pred HHHHHHHHH-HHcCCHHHHHHHHHHHHh
Confidence 4444 567888888888777764
No 152
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.71 E-value=2.6e-06 Score=100.72 Aligned_cols=309 Identities=10% Similarity=-0.041 Sum_probs=179.7
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchh------hhHhh--hcHHHHHHHhhc-----CCChHHHHHHHHHHHhccCHHHHHH
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHV------PRMLL--ENTDKLEKYIIQ-----SKDPVLLKWWAQYIESTEDMDLAMK 71 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~------~~~~~--~~~~~~~~~~~~-----~~~~~l~~~~a~~~e~~~~~~~A~~ 71 (1074)
.+...|++++|+.+|+++-..+... ..+++ +++.++.+++.+ ++++..+..+|..+...|++++|..
T Consensus 15 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~ 94 (514)
T 2gw1_A 15 QFFRNKKYDDAIKYYNWALELKEDPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANEGLGKFADAMF 94 (514)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHhcCccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4667899999999999997654332 22222 477766666654 5778899999999999999999999
Q ss_pred HHHHhhChhh----------------------------------------------------------------------
Q psy14927 72 YYEEARDYLS---------------------------------------------------------------------- 81 (1074)
Q Consensus 72 ~y~~a~d~~~---------------------------------------------------------------------- 81 (1074)
+|.++-....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (514)
T 2gw1_A 95 DLSVLSLNGDFNDASIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELSTQPAKERKDKQENLPSVTSMASFFGIFKPE 174 (514)
T ss_dssp HHHHHHHSSSCCGGGTHHHHHHHHHHHHHHHHTTC---------------------------CCCCHHHHHHHHTTSCCC
T ss_pred HHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhhHHHhhccCCchhHHHHHHHhhcCHH
Confidence 9988632211
Q ss_pred -----------------hhhHhh---ccCCHHHHHHHHHh-------------------cCChHHHHHHHHHHHhcCChH
Q psy14927 82 -----------------MVRVLC---FLQDFSRAAELANA-------------------SGDTAAAYHLARQYENSGQFD 122 (1074)
Q Consensus 82 -----------------~vr~l~---~~~~~~~a~~i~~~-------------------~~~~~~~~~la~~~~~~g~~~ 122 (1074)
...++. ..|++++|.++.++ +.+..+.+.+|..+...|+++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (514)
T 2gw1_A 175 LTFANYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPL 254 (514)
T ss_dssp CCCSSCCSSCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHSSCHH
T ss_pred HHHHHhcCCcHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHCCCHH
Confidence 111112 37888888877652 223346678889999999999
Q ss_pred HHHHHHHHhCChHHHHHHHHHhCchHHHHHHh---hhcCc-hhHH-HHHHHHcc--CC---hhHHHHHHHHhCChHHHHH
Q psy14927 123 EAIHFYSVAGSCGNAVRLCKEQALDDQLWNLA---LSAGP-SEQI-EAATYLET--IE---PDKAVLLYHKAGALHKALD 192 (1074)
Q Consensus 123 ~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~---~~~~~-~~~~-~~A~~~e~--~~---~~~A~~ly~kaG~~~kAl~ 192 (1074)
+|+++|.++-..+. + .+.+..++ ...+. +.-. .+-+.++. .+ +..-+.+|.+.|++.+|+.
T Consensus 255 ~A~~~~~~~l~~~~--------~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 325 (514)
T 2gw1_A 255 GAHEDIKKAIELFP--------R-VNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGK 325 (514)
T ss_dssp HHHHHHHHHHHHCC--------C-HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTCTTHHHH
T ss_pred HHHHHHHHHHhhCc--------c-HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCCHHHHHH
Confidence 99988876422110 0 11111111 11000 0000 00011111 01 2334556666677777777
Q ss_pred HHHhhccCCc-chHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCCHHHH
Q psy14927 193 LAFKLTLSNS-GLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKAPHLL 271 (1074)
Q Consensus 193 l~~~~~~~~~-~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~~~~a 271 (1074)
.+.+.-..+. ....+..-..++.+.|+.++++.+...+.. . ...++.....+...|.+.|.+++|
T Consensus 326 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~---------~-----~~~~~~~~~~la~~~~~~~~~~~A 391 (514)
T 2gw1_A 326 DFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKR---------K-----FPEAPEVPNFFAEILTDKNDFDKA 391 (514)
T ss_dssp HHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHH---------H-----STTCSHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---------H-----cccCHHHHHHHHHHHHHCCCHHHH
Confidence 6655321111 111223334455667777666554433221 0 123445556667777777777777
Q ss_pred HHHHHHH--------------------HhHHHHh---hcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHh
Q psy14927 272 ANFYVSC--------------------AQVEIDE---FGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEID 328 (1074)
Q Consensus 272 a~~~~~~--------------------a~~ei~e---~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (1074)
...+..+ +... .. .|+|++|...+..++..- ...+ .....+..++.+
T Consensus 392 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~A~~~~~~a~~~~----~~~~-----~~~~~la~~~~~ 461 (514)
T 2gw1_A 392 LKQYDLAIELENKLDGIYVGIAPLVGKATLL-TRNPTVENFIEATNLLEKASKLD----PRSE-----QAKIGLAQMKLQ 461 (514)
T ss_dssp HHHHHHHHHHHHTSSSCSSCSHHHHHHHHHH-HTSCCTTHHHHHHHHHHHHHHHC----TTCH-----HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccchHHHHHHHHHHHHHHH-hhhhhcCCHHHHHHHHHHHHHhC----cccH-----HHHHHHHHHHHH
Confidence 6555444 3333 33 688888888888877642 1111 122244667777
Q ss_pred hcCChHHHhhHHHHHHHHH
Q psy14927 329 EFGNYEKGLGALNEAKRCL 347 (1074)
Q Consensus 329 ~~~~~~~a~~~~~~~~~~~ 347 (1074)
.|+++.|...|.++-..-
T Consensus 462 -~g~~~~A~~~~~~a~~~~ 479 (514)
T 2gw1_A 462 -QEDIDEAITLFEESADLA 479 (514)
T ss_dssp -TTCHHHHHHHHHHHHHHC
T ss_pred -hcCHHHHHHHHHHHHHhc
Confidence 799999999998887653
No 153
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.71 E-value=8.7e-06 Score=90.81 Aligned_cols=126 Identities=10% Similarity=0.019 Sum_probs=83.7
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHh---------hhcHHHHHHHhhc-----CCChHHHHHHHHHHHhccCHHHHH
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRML---------LENTDKLEKYIIQ-----SKDPVLLKWWAQYIESTEDMDLAM 70 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~---------~~~~~~~~~~~~~-----~~~~~l~~~~a~~~e~~~~~~~A~ 70 (1074)
.+...|++++|+..|+++-..+..-+..+ .+++.++..+..+ ++++..+..+|..+...|++++|.
T Consensus 12 ~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 91 (359)
T 3ieg_A 12 KLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGKLDEAE 91 (359)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCChHHHH
Confidence 46778999999999998865443322222 1356655555544 456777777888888888888888
Q ss_pred HHHHHhhChhh-----------------------hhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChH
Q psy14927 71 KYYEEARDYLS-----------------------MVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFD 122 (1074)
Q Consensus 71 ~~y~~a~d~~~-----------------------~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~ 122 (1074)
++|.++-.... ..+++...|++++|.+..++ +.+......+|..|...|+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3ieg_A 92 DDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPR 171 (359)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHH
Confidence 88887744322 14556677777777776652 345566667777777777777
Q ss_pred HHHHHHHH
Q psy14927 123 EAIHFYSV 130 (1074)
Q Consensus 123 ~Ai~~y~~ 130 (1074)
+|+++|.+
T Consensus 172 ~A~~~~~~ 179 (359)
T 3ieg_A 172 KAISDLKA 179 (359)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766654
No 154
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.69 E-value=2.6e-08 Score=106.32 Aligned_cols=143 Identities=14% Similarity=0.139 Sum_probs=93.4
Q ss_pred hhHHhhcCCcEEEEecCCccCC----------------CC-------CCHHHHHHHHHHHHhC-CCEEEeCceEEEEEec
Q psy14927 922 GSVWGRLGAEVTAIEFMNAIGG----------------MG-------IDGEVAKQFQRILGKQ-GMQFKLGTKVTGASKS 977 (1074)
Q Consensus 922 A~~l~~~G~~Vtlv~~~~~~~~----------------~~-------~~~~~~~~~~~~l~~~-gV~i~~~~~v~~i~~~ 977 (1074)
|..|++.|.+|+++++...... +. ..+.+...+.+.+++. ||+++ ++.++++..+
T Consensus 19 A~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~ 97 (232)
T 2cul_A 19 AFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRPLHLF-QATATGLLLE 97 (232)
T ss_dssp HHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEE
T ss_pred HHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEe
Confidence 6677888999999998721100 00 1126667777888886 99999 4689999876
Q ss_pred CCeE-EEEEeeccCCCCceEEEcCEEEEccCCcccCCcc-C--------------------ccccCcccCCCC-------
Q psy14927 978 GDNI-TVTIENVKDPTKKEELSCDALLVCVGRRPYTHNL-G--------------------LEEIGIEKDEKG------- 1028 (1074)
Q Consensus 978 ~~~~-~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l-~--------------------l~~~gl~ld~~G------- 1028 (1074)
++.+ .|.+.+ +.++++|.||+|+|..++.... + +...|+.++...
T Consensus 98 ~~~v~~v~~~~------g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~ 171 (232)
T 2cul_A 98 GNRVVGVRTWE------GPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETP 171 (232)
T ss_dssp TTEEEEEEETT------SCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCEEEEEEEEC---
T ss_pred CCEEEEEEECC------CCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeEEccccccCcCC
Confidence 6653 344432 3479999999999995443210 0 112222222110
Q ss_pred -C-------eeeC------CCC-CCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHhhC
Q psy14927 1029 -R-------VPVN------SRF-QTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 1029 -~-------I~Vd------~~~-~ts~~~IyAiGD~~~~~~~~~~A~~~G~~aA~~I~~ 1072 (1074)
. .... ..+ .|++||||++|||+ .......|+.+|+.+|.+|..
T Consensus 172 g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 172 STPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REGDYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp --CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCchhhcccCCCCCccccccccccceeeeecc-cCccHHHHHHHHHHHHHHHHh
Confidence 0 0000 011 27999999999999 766888899999999999974
No 155
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.68 E-value=1.4e-05 Score=92.96 Aligned_cols=127 Identities=13% Similarity=0.055 Sum_probs=96.3
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhh-------hHhh--hcHHHHHHHhhc-----CCChHHHHHHHHHHHhccCHHHHH
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVP-------RMLL--ENTDKLEKYIIQ-----SKDPVLLKWWAQYIESTEDMDLAM 70 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~-------~~~~--~~~~~~~~~~~~-----~~~~~l~~~~a~~~e~~~~~~~A~ 70 (1074)
.+...|++++|+.+|+++-..+..-+ ..++ +++..+..+..+ ++++..+..+|..+...|++++|.
T Consensus 35 ~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 114 (450)
T 2y4t_A 35 KLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAE 114 (450)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHH
Confidence 35678999999999998764332222 2222 467666665554 567888999999999999999999
Q ss_pred HHHHHhhChh-----------------------hhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChH
Q psy14927 71 KYYEEARDYL-----------------------SMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFD 122 (1074)
Q Consensus 71 ~~y~~a~d~~-----------------------~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~ 122 (1074)
++|.++-... ....++...|++++|.+..+. +.+......+|..|.+.|+++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 194 (450)
T 2y4t_A 115 DDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPR 194 (450)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCGG
T ss_pred HHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCHH
Confidence 9999874421 124458889999999888763 457778889999999999999
Q ss_pred HHHHHHHHh
Q psy14927 123 EAIHFYSVA 131 (1074)
Q Consensus 123 ~Ai~~y~~a 131 (1074)
+|++.|.++
T Consensus 195 ~A~~~~~~~ 203 (450)
T 2y4t_A 195 KAISDLKAA 203 (450)
T ss_dssp GGHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988765
No 156
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.67 E-value=4.6e-06 Score=99.43 Aligned_cols=315 Identities=12% Similarity=0.059 Sum_probs=178.3
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHh---------hhcHHHHHHHhhc-----CCChHHHHHHHHHHHhccCHHHHH
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRML---------LENTDKLEKYIIQ-----SKDPVLLKWWAQYIESTEDMDLAM 70 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~---------~~~~~~~~~~~~~-----~~~~~l~~~~a~~~e~~~~~~~A~ 70 (1074)
.+...|++++|+.+|+++-..+..-+..+ .+++.++.++..+ ++++..+..+|..+...|++++|.
T Consensus 34 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~ 113 (537)
T 3fp2_A 34 HFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASANESLGNFTDAM 113 (537)
T ss_dssp HHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHcCCHHHHH
Confidence 45678999999999999876543332222 2467766666655 577889999999999999999999
Q ss_pred HHHHHhhChhh---------------------------------------------------------------------
Q psy14927 71 KYYEEARDYLS--------------------------------------------------------------------- 81 (1074)
Q Consensus 71 ~~y~~a~d~~~--------------------------------------------------------------------- 81 (1074)
++|........
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (537)
T 3fp2_A 114 FDLSVLSLNGDFDGASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPSNTSLASFFGIFDSHLEVSSVNTSSNYDTAY 193 (537)
T ss_dssp HHHHHHC-----------CHHHHHHHHHHHHHHHHHCC-------CCCCCHHHHHHHHHTSCHHHHHHTSCCCCSSCSSH
T ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccchHhHHHHHHHhcChHHHHHHHhhccccccHH
Confidence 98853310000
Q ss_pred --hhhHhh------------ccCCHHHHHHHHHh-----cCChH-------HHHHHHHHHHhcCChHHHHHHHHHhCChH
Q psy14927 82 --MVRVLC------------FLQDFSRAAELANA-----SGDTA-------AAYHLARQYENSGQFDEAIHFYSVAGSCG 135 (1074)
Q Consensus 82 --~vr~l~------------~~~~~~~a~~i~~~-----~~~~~-------~~~~la~~~~~~g~~~~Ai~~y~~a~~~~ 135 (1074)
+.+.+. ..+++++|.++.+. +.+.. +.+.+|..+...|++++|+++|.++-..+
T Consensus 194 ~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~ 273 (537)
T 3fp2_A 194 ALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINLH 273 (537)
T ss_dssp HHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcC
Confidence 111111 11366677666552 22322 45677788888888888888877653211
Q ss_pred HHHHHHHHhCchHHHHHHhhh-cCchhHHHHHHHHcc------CC---hhHHHHHHHHhCChHHHHHHHHhhccCCc-ch
Q psy14927 136 NAVRLCKEQALDDQLWNLALS-AGPSEQIEAATYLET------IE---PDKAVLLYHKAGALHKALDLAFKLTLSNS-GL 204 (1074)
Q Consensus 136 ~A~~la~~~~~~~~~~~l~~~-~~~~~~~~~A~~~e~------~~---~~~A~~ly~kaG~~~kAl~l~~~~~~~~~-~~ 204 (1074)
. + .+.+..++.. .....+..+-.+|+. .. +..-+.+|.+.|++.+|+..+.+.-..+. ..
T Consensus 274 ~--------~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 344 (537)
T 3fp2_A 274 P--------T-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENV 344 (537)
T ss_dssp C--------C-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCS
T ss_pred C--------C-chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Confidence 0 0 1111222111 111111112222211 11 23345566666777777766655321110 01
Q ss_pred HHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCCHHHHHHHHHHHHhHHH-
Q psy14927 205 VFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKAPHLLANFYVSCAQVEI- 283 (1074)
Q Consensus 205 ~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~~~~aa~~~~~~a~~ei- 283 (1074)
..+..-..++.+.|+.++++.+...+.. . ...++.....+..+|...|.+++|...|..+....-
T Consensus 345 ~~~~~la~~~~~~g~~~~A~~~~~~~~~---------~-----~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 410 (537)
T 3fp2_A 345 YPYIQLACLLYKQGKFTESEAFFNETKL---------K-----FPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEV 410 (537)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH---------H-----CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH---------h-----CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCc
Confidence 1223334555667777666555433221 1 234466777778888888888888888777644320
Q ss_pred ------------------Hhh----------cCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhhcCChHH
Q psy14927 284 ------------------DEF----------GNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEIDEFGNYEK 335 (1074)
Q Consensus 284 ------------------~e~----------~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (1074)
... |+|+.|...+..+++.- ...+ .....+..+|.+ .|+++.
T Consensus 411 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~----p~~~-----~~~~~l~~~~~~-~g~~~~ 480 (537)
T 3fp2_A 411 QEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELD----PRSE-----QAKIGLAQLKLQ-MEKIDE 480 (537)
T ss_dssp CSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHC----TTCH-----HHHHHHHHHHHH-TTCHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhC----CCCH-----HHHHHHHHHHHH-hccHHH
Confidence 122 77777777777766542 1112 122345677778 799999
Q ss_pred HhhHHHHHHHHHhhccC
Q psy14927 336 GLGALNEAKRCLLKHND 352 (1074)
Q Consensus 336 a~~~~~~~~~~~~~~~~ 352 (1074)
|+..|.++...-...+.
T Consensus 481 A~~~~~~al~~~~~~~~ 497 (537)
T 3fp2_A 481 AIELFEDSAILARTMDE 497 (537)
T ss_dssp HHHHHHHHHHHC--CHH
T ss_pred HHHHHHHHHHhCCCcHH
Confidence 99999998876444443
No 157
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.61 E-value=1.8e-05 Score=93.91 Aligned_cols=311 Identities=11% Similarity=0.041 Sum_probs=177.9
Q ss_pred cCCHHHHHHHHHHcCcccchh-----hhHhh------hcHHHHHHHhhc---CCChHHHHHHHHHHHh----ccCHHHHH
Q psy14927 9 NGDIDRAIRMFEKAETHQQHV-----PRMLL------ENTDKLEKYIIQ---SKDPVLLKWWAQYIES----TEDMDLAM 70 (1074)
Q Consensus 9 ~g~~~eA~~~Ye~~~~~~~~~-----~~~~~------~~~~~~~~~~~~---~~~~~l~~~~a~~~e~----~~~~~~A~ 70 (1074)
.+++++|+.+|+++-.....- ..+|. +++.++.++..+ ..++.-+..+|..+.. .+++++|.
T Consensus 56 ~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~ 135 (490)
T 2xm6_A 56 TKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGNGVKVDKAESV 135 (490)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHH
T ss_pred CcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHH
Confidence 688999999999875443111 23332 255666665555 3567777788888887 78899999
Q ss_pred HHHHHhhCh---hhh---hhHhhc----cCCHHHHHHHHH---hcCChHHHHHHHHHHHh----cCChHHHHHHHHHhCC
Q psy14927 71 KYYEEARDY---LSM---VRVLCF----LQDFSRAAELAN---ASGDTAAAYHLARQYEN----SGQFDEAIHFYSVAGS 133 (1074)
Q Consensus 71 ~~y~~a~d~---~~~---vr~l~~----~~~~~~a~~i~~---~~~~~~~~~~la~~~~~----~g~~~~Ai~~y~~a~~ 133 (1074)
++|.++-+- ... ..+|.. .+++++|.+..+ +.++..+.+.+|..|.. .+++++|+++|.++-.
T Consensus 136 ~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 215 (490)
T 2xm6_A 136 KWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQGNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSAT 215 (490)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence 988886443 222 233444 678888887765 45778888888988887 7888999888877522
Q ss_pred hHHHHHHHHHhCchHHHHHHhhh-----cCchhHHHHHHHHcc----CC---hhHHHHHHHH----hCChHHHHHHHHhh
Q psy14927 134 CGNAVRLCKEQALDDQLWNLALS-----AGPSEQIEAATYLET----IE---PDKAVLLYHK----AGALHKALDLAFKL 197 (1074)
Q Consensus 134 ~~~A~~la~~~~~~~~~~~l~~~-----~~~~~~~~~A~~~e~----~~---~~~A~~ly~k----aG~~~kAl~l~~~~ 197 (1074)
. +.......++.. ..+.++.++-.||+. ++ ...-+.+|.. .+++.+|++++.+.
T Consensus 216 ~----------~~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a 285 (490)
T 2xm6_A 216 S----------GDELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQGNSIAQFRLGYILEQGLAGAKEPLKALEWYRKS 285 (490)
T ss_dssp T----------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHH
T ss_pred C----------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Confidence 1 212222222111 113334444445443 11 1122334444 56666666666554
Q ss_pred ccCCcc-hHHHHHHHHHHhcC-----CChhhHHHhhhhc---chHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCCH
Q psy14927 198 TLSNSG-LVFQIKAMKCLLKS-----GDTNKIIFFAGVS---RMKEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKAP 268 (1074)
Q Consensus 198 ~~~~~~-~~~~~~a~k~l~~~-----~~~~~~i~~a~~~---r~~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~~ 268 (1074)
...++. ..+.+ ..+.... +|.++++.+-..+ ...+.+..++..+... +.+++++.++++|.++-..
T Consensus 286 ~~~~~~~a~~~L--g~~y~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~y~~~---g~~~~~~~A~~~~~~a~~~ 360 (490)
T 2xm6_A 286 AEQGNSDGQYYL--AHLYDKGAEGVAKNREQAISWYTKSAEQGDATAQANLGAIYFRL---GSEEEHKKAVEWFRKAAAK 360 (490)
T ss_dssp HTTTCHHHHHHH--HHHHHHCBTTBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS---CCHHHHHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHH--HHHHHcCCCCCcCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhC---CCcccHHHHHHHHHHHHHC
Confidence 321110 01111 1112222 6666665543322 2344455555555443 4567778888888776433
Q ss_pred HHHHHHHHHHHhHHHHh----hcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHh---hcCChHHHhhHHH
Q psy14927 269 HLLANFYVSCAQVEIDE----FGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEID---EFGNYEKGLGALN 341 (1074)
Q Consensus 269 ~~aa~~~~~~a~~ei~e----~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~a~~~~~ 341 (1074)
.. ...+...+..- .. -+||++|...+..|... + .+. ....+..+|.. ..+|+++|...|.
T Consensus 361 ~~-~~a~~~Lg~~y-~~g~g~~~~~~~A~~~~~~A~~~----~--~~~-----a~~~Lg~~y~~g~g~~~d~~~A~~~~~ 427 (490)
T 2xm6_A 361 GE-KAAQFNLGNAL-LQGKGVKKDEQQAAIWMRKAAEQ----G--LSA-----AQVQLGEIYYYGLGVERDYVQAWAWFD 427 (490)
T ss_dssp TC-HHHHHHHHHHH-HHTSSSCCCHHHHHHHHHHHHHT----T--CHH-----HHHHHHHHHHHTSSSCCCHHHHHHHHH
T ss_pred CC-HHHHHHHHHHH-HcCCCCCCCHHHHHHHHHHHHhC----C--CHH-----HHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 22 22333445444 33 58999999999988762 2 121 12223344444 2489999999999
Q ss_pred HHHHHH
Q psy14927 342 EAKRCL 347 (1074)
Q Consensus 342 ~~~~~~ 347 (1074)
++...-
T Consensus 428 ~A~~~~ 433 (490)
T 2xm6_A 428 TASTND 433 (490)
T ss_dssp HHHHHH
T ss_pred HHHHCC
Confidence 988763
No 158
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.59 E-value=1e-06 Score=111.41 Aligned_cols=177 Identities=16% Similarity=0.108 Sum_probs=140.3
Q ss_pred hcHHHHHH-HhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHH
Q psy14927 35 ENTDKLEK-YIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLAR 113 (1074)
Q Consensus 35 ~~~~~~~~-~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~ 113 (1074)
+++..+.+ +++...++......+++++..|.++.|.+... |-.....+...+|+++.|.++++...+......+|+
T Consensus 613 ~~~~~a~~~~l~~i~~~~~~~~~~~~l~~~~~~~~a~~~~~---~~~~~f~~~l~~~~~~~A~~~~~~~~~~~~W~~la~ 689 (814)
T 3mkq_A 613 GEIEEAIENVLPNVEGKDSLTKIARFLEGQEYYEEALNISP---DQDQKFELALKVGQLTLARDLLTDESAEMKWRALGD 689 (814)
T ss_dssp TCHHHHHHHTGGGCCCHHHHHHHHHHHHHTTCHHHHHHHCC---CHHHHHHHHHHHTCHHHHHHHHTTCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCchHHHHHHHHHHHhCCChHHheecCC---CcchheehhhhcCCHHHHHHHHHhhCcHhHHHHHHH
Confidence 57777777 77666624444888999999999999987663 444445557789999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHcc-CChhHHHHHHHHhCChHHHHH
Q psy14927 114 QYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLET-IEPDKAVLLYHKAGALHKALD 192 (1074)
Q Consensus 114 ~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~-~~~~~A~~ly~kaG~~~kAl~ 192 (1074)
++++.|+++.|++.|.++++|+.+..|....+..+.+. ++|+..+. +++..|..+|.++|++.+|++
T Consensus 690 ~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~------------~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~ 757 (814)
T 3mkq_A 690 ASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLV------------TLAKDAETTGKFNLAFNAYWIAGDIQGAKD 757 (814)
T ss_dssp HHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHH------------HHHHHHHHTTCHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHH------------HHHHHHHHcCchHHHHHHHHHcCCHHHHHH
Confidence 99999999999999999999999999988776555433 45555555 668889999999999999999
Q ss_pred HHHhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHH--HHHHHHHHHhcC
Q psy14927 193 LAFKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKE--IYVMAANYLQSS 246 (1074)
Q Consensus 193 l~~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~--l~~~aa~yl~~~ 246 (1074)
+|.+ .+.+++|+.+|......+ +-.....|-+.+
T Consensus 758 ~~~~--------------------~~~~~~A~~lA~~~~~~~~~i~~~~~~~~~~L 793 (814)
T 3mkq_A 758 LLIK--------------------SQRFSEAAFLGSTYGLGDNEVNDIVTKWKENL 793 (814)
T ss_dssp HHHH--------------------TTCHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHH--------------------cCChHHHHHHHHHhCCChHHHHHHHHHHHHHH
Confidence 9888 788888888888876555 545444444443
No 159
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.56 E-value=1.6e-05 Score=92.41 Aligned_cols=281 Identities=14% Similarity=0.057 Sum_probs=161.0
Q ss_pred cCCChHHHHHHHHHHHhccCHHHHHHHHHHhhC--------hhhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHH
Q psy14927 46 QSKDPVLLKWWAQYIESTEDMDLAMKYYEEARD--------YLSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLA 112 (1074)
Q Consensus 46 ~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d--------~~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la 112 (1074)
+++++..+...|..+...|++++|.++|.++-+ +..+..++..+|++++|.+..+. +.+..+...+|
T Consensus 22 ~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 101 (450)
T 2y4t_A 22 SMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRG 101 (450)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 355677888889999999999999999998643 24556678899999999988763 45677888999
Q ss_pred HHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHccCChhHHHHHHHHhCChHHHHH
Q psy14927 113 RQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLETIEPDKAVLLYHKAGALHKALD 192 (1074)
Q Consensus 113 ~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~~~~~~A~~ly~kaG~~~kAl~ 192 (1074)
..|...|++++|+++|.++-..+.-...+ .+.+. ..+..+.......-+..|.+.|++.+|+.
T Consensus 102 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~-----~~~~~------------~l~~~~~~~~~~~~a~~~~~~~~~~~A~~ 164 (450)
T 2y4t_A 102 HLLLKQGKLDEAEDDFKKVLKSNPSENEE-----KEAQS------------QLIKSDEMQRLRSQALNAFGSGDYTAAIA 164 (450)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTSCCCHHHH-----HHHHH------------HHHHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCChhh-----HHHHH------------HHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 99999999999999987753321100000 00001 11111111111222334555555555555
Q ss_pred HHHhhccCC-cchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCCHHHH
Q psy14927 193 LAFKLTLSN-SGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKAPHLL 271 (1074)
Q Consensus 193 l~~~~~~~~-~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~~~~a 271 (1074)
++.+.-..+ .....+..-..++.+.|+.++++.+...+... ...++.....+...|...|.+++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------------~~~~~~~~~~l~~~~~~~g~~~~A 230 (450)
T 2y4t_A 165 FLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKL--------------KNDNTEAFYKISTLYYQLGDHELS 230 (450)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHH--------------HCSCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------------CCCCHHHHHHHHHHHHHcCCHHHH
Confidence 554421100 01112233345667778887776655443210 012233344444445555555554
Q ss_pred HHHHHHH--------------------------HhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH
Q psy14927 272 ANFYVSC--------------------------AQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEV 325 (1074)
Q Consensus 272 a~~~~~~--------------------------a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 325 (1074)
...+..+ +... ...|+|++|...+..+++.. ...+ .+...+...+..+
T Consensus 231 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~A~~~~~~~l~~~----p~~~-~~~~~~~~~l~~~ 304 (450)
T 2y4t_A 231 LSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEEL-IRDGRYTDATSKYESVMKTE----PSIA-EYTVRSKERICHC 304 (450)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHC----CSSH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhcC----Ccch-HHHHHHHHHHHHH
Confidence 4444333 4444 56688888888888877632 1122 1222233344667
Q ss_pred HHhhcCChHHHhhHHHHHHHHHhhccCcchhHHHHHHHHHHHHH
Q psy14927 326 EIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKIAEV 369 (1074)
Q Consensus 326 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 369 (1074)
+.+ .|+++.|+..+.++-.. .|+... ++. ....++.+.
T Consensus 305 ~~~-~g~~~~A~~~~~~a~~~---~p~~~~-~~~-~l~~~~~~~ 342 (450)
T 2y4t_A 305 FSK-DEKPVEAIRVCSEVLQM---EPDNVN-ALK-DRAEAYLIE 342 (450)
T ss_dssp HHT-TTCHHHHHHHHHHHHHH---CTTCHH-HHH-HHHHHHHHT
T ss_pred HHH-CCCHHHHHHHHHHHHHh---CcccHH-HHH-HHHHHHHHh
Confidence 777 69999999988877554 555443 222 244454433
No 160
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.55 E-value=2e-05 Score=87.85 Aligned_cols=85 Identities=16% Similarity=0.070 Sum_probs=67.2
Q ss_pred ChHHHHHHHHHHHhccCHHHHHHHHHHhhC--------hhhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHH
Q psy14927 49 DPVLLKWWAQYIESTEDMDLAMKYYEEARD--------YLSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQY 115 (1074)
Q Consensus 49 ~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d--------~~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~ 115 (1074)
++..+...|..+...|++++|.++|.++-. +..+..++..+|++++|.+..+. +.+..+...+|..|
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 81 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLL 81 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 456778888888899999999999987632 23455667888899888887662 45677888999999
Q ss_pred HhcCChHHHHHHHHHhCC
Q psy14927 116 ENSGQFDEAIHFYSVAGS 133 (1074)
Q Consensus 116 ~~~g~~~~Ai~~y~~a~~ 133 (1074)
...|++++|+++|.++-.
T Consensus 82 ~~~~~~~~A~~~~~~~~~ 99 (359)
T 3ieg_A 82 LKQGKLDEAEDDFKKVLK 99 (359)
T ss_dssp HHHTCHHHHHHHHHHHHT
T ss_pred HHcCChHHHHHHHHHHHh
Confidence 999999999999887643
No 161
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.52 E-value=3e-07 Score=110.74 Aligned_cols=139 Identities=14% Similarity=0.111 Sum_probs=80.2
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhcc-ccccc--------cchhhhh------hh-----------------
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAG-DKGVK--------LNLETMM------GT----------------- 836 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~-~~g~~--------~~~~~~~------~~----------------- 836 (1074)
..+|||||||+||++||+.+++ +++|+.. ..|.. +....+. ..
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~ 107 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILN 107 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhh
Confidence 3469999999999999999998 6777653 12110 0000000 00
Q ss_pred --hhHH---------HhhhhhhHHHHhhh-CCeEEEeeeEEEec--CCeE-EEEeCCCCeeEEEcCeEEEccCCCCC--C
Q psy14927 837 --KSAA---------VKALTGGIAHLFKS-NKVTQLNGHGKITG--PNTV-TVIKSDGSTEEVKTKNILIATGSEVT--P 899 (1074)
Q Consensus 837 --~~~~---------~~~l~~~~~~~l~~-~gV~~~~g~v~~id--~~~~-~v~~~~G~~~~i~~d~lIIATG~~p~--~ 899 (1074)
.... ...+...+.+.+.+ .||+++.++|+.+. .+.+ .|.+.+| .++.+|.||+|||+.+. .
T Consensus 108 ~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG--~~I~Ad~VVLATGt~s~~~~ 185 (651)
T 3ces_A 108 ASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMG--LKFRAKAVVLTVGTFLDGKI 185 (651)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTS--EEEEEEEEEECCSTTTCCEE
T ss_pred cccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCC--CEEECCEEEEcCCCCccCcc
Confidence 0000 01233345666666 69999877888873 4433 5677777 68999999999999863 3
Q ss_pred CCCCCCCCcceechhhHhcchHhhHHhhcCCcEEEEe
Q psy14927 900 FPGIEVDEETIVSSTGALSLKKGSVWGRLGAEVTAIE 936 (1074)
Q Consensus 900 ipgi~~~~~~v~t~~~~~~~~~A~~l~~~G~~Vtlv~ 936 (1074)
++|.......-. . +.....-+..|.++|.+|+.+.
T Consensus 186 i~G~~~~~~gri-G-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 186 HIGLDNYSGGRA-G-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp ECC---------------CCHHHHHHHTTTCCEEEEC
T ss_pred ccCcccCCCCCc-c-chhhhHHHHHHHhcCCeEEEec
Confidence 444321110000 0 1111111777888899988874
No 162
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.52 E-value=1.8e-05 Score=90.32 Aligned_cols=232 Identities=15% Similarity=0.180 Sum_probs=144.5
Q ss_pred hhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh-------
Q psy14927 7 MKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY------- 79 (1074)
Q Consensus 7 ~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~------- 79 (1074)
...|++++|+.+|+++-..-..++.- . .....+...|..+...|+++.|.++|.+|-+.
T Consensus 114 ~~~g~~~~A~~~~~~al~~~~~~~~~----~----------~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 179 (383)
T 3ulq_A 114 LDQREYLSAIKFFKKAESKLIFVKDR----I----------EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAY 179 (383)
T ss_dssp HHTTCHHHHHHHHHHHHTTGGGCCCH----H----------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTT
T ss_pred HHhcCHHHHHHHHHHHHHHHhhCCCH----H----------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccc
Confidence 45688888888888876442111100 0 01356778899999999999999999887553
Q ss_pred --------hhhhhHhhccCCHHHHHHHHHh-------cCCh----HHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHH
Q psy14927 80 --------LSMVRVLCFLQDFSRAAELANA-------SGDT----AAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRL 140 (1074)
Q Consensus 80 --------~~~vr~l~~~~~~~~a~~i~~~-------~~~~----~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~l 140 (1074)
..+..++..+|++++|.+..++ .++. .+...+|..|..+|++++|+++|. +|+++
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~------~al~~ 253 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFK------RAIAV 253 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH------HHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHH------HHHHH
Confidence 2233556777888777765542 2222 255678888888888888888764 45666
Q ss_pred HHHhCc-hHHHHHHhhhcCchhHHHHHHHHcc-CChhHHHHHHHHhCChHHHHHHHHhhccCCcchHHHHHHHHHHhcCC
Q psy14927 141 CKEQAL-DDQLWNLALSAGPSEQIEAATYLET-IEPDKAVLLYHKAGALHKALDLAFKLTLSNSGLVFQIKAMKCLLKSG 218 (1074)
Q Consensus 141 a~~~~~-~~~~~~l~~~~~~~~~~~~A~~~e~-~~~~~A~~ly~kaG~~~kAl~l~~~~~~~~~~~~~~~~a~k~l~~~~ 218 (1074)
++..+. .... ..+...|..+.. +++++|..+|.+ |++++-+ .+
T Consensus 254 ~~~~~~~~~~~---------~~~~~l~~~~~~~g~~~~A~~~~~~------al~~~~~--------------------~~ 298 (383)
T 3ulq_A 254 FEESNILPSLP---------QAYFLITQIHYKLGKIDKAHEYHSK------GMAYSQK--------------------AG 298 (383)
T ss_dssp HHHTTCGGGHH---------HHHHHHHHHHHHTTCHHHHHHHHHH------HHHHHHH--------------------HT
T ss_pred HHhhccchhHH---------HHHHHHHHHHHHCCCHHHHHHHHHH------HHHHHHH--------------------cC
Confidence 665533 1111 112223332222 444444444432 2333222 23
Q ss_pred ChhhHHHhhhhcchHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCCHHHHHHHHHHHHhHHHHhhcCHHHHHHHHHH
Q psy14927 219 DTNKIIFFAGVSRMKEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKAPHLLANFYVSCAQVEIDEFGNYEKGLGALNE 298 (1074)
Q Consensus 219 ~~~~~i~~a~~~r~~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~ 298 (1074)
+... ... +..++...... ++++.+..++.++.+.+.....+..+...+..- ..-|+|++|...+..
T Consensus 299 ~~~~---------~~~-~~~l~~~~~~~---~~~~~~~~al~~~~~~~~~~~~~~~~~~la~~y-~~~g~~~~A~~~~~~ 364 (383)
T 3ulq_A 299 DVIY---------LSE-FEFLKSLYLSG---PDEEAIQGFFDFLESKMLYADLEDFAIDVAKYY-HERKNFQKASAYFLK 364 (383)
T ss_dssp CHHH---------HHH-HHHHHHHHTSS---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHH
T ss_pred CHHH---------HHH-HHHHHHHHhCC---CcHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHH
Confidence 2211 111 22344444333 344778889999999999999999999999998 999999999999999
Q ss_pred HHHHHHhcC
Q psy14927 299 AKRCLLKHN 307 (1074)
Q Consensus 299 a~~~l~~~~ 307 (1074)
+++.-.+..
T Consensus 365 al~~~~~i~ 373 (383)
T 3ulq_A 365 VEQVRQLIQ 373 (383)
T ss_dssp HHHHHTSCS
T ss_pred HHHHHHHhh
Confidence 998776643
No 163
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.48 E-value=2.2e-08 Score=117.27 Aligned_cols=94 Identities=19% Similarity=0.228 Sum_probs=69.2
Q ss_pred HHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccC--------CcccCCccCccccC
Q psy14927 950 VAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVG--------RRPYTHNLGLEEIG 1021 (1074)
Q Consensus 950 ~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G--------~~p~~~~l~l~~~g 1021 (1074)
+...+...+++.| +|++++.|++|+.+++++.|++.+ +.++.+|.||+|+| +.|+.+....+..+
T Consensus 206 ~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~------g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~ 278 (431)
T 3k7m_X 206 SADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVKD------GHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIE 278 (431)
T ss_dssp THHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEETT------SCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHH
T ss_pred HHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEECC------CCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHH
Confidence 3455556667778 999999999999877777776543 34699999999999 88887753333222
Q ss_pred cccCCCCCeeeCCCCCCCCCCEEEecccCC
Q psy14927 1022 IEKDEKGRVPVNSRFQTVIPNIFAIGDCIH 1051 (1074)
Q Consensus 1022 l~ld~~G~I~Vd~~~~ts~~~IyAiGD~~~ 1051 (1074)
... ....++|+..++|+.++||+.||+..
T Consensus 279 ~~~-~~~~~kv~~~~~~~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 279 EGH-GGQGLKILIHVRGAEAGIECVGDGIF 307 (431)
T ss_dssp HCC-CCCEEEEEEEEESCCTTEEEEBSSSS
T ss_pred hCC-CcceEEEEEEECCCCcCceEcCCCCE
Confidence 222 23348899889999999999999854
No 164
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.47 E-value=1.7e-05 Score=85.15 Aligned_cols=110 Identities=20% Similarity=0.156 Sum_probs=86.2
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhC------
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARD------ 78 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d------ 78 (1074)
.+...|++++|+..|+++-..+ ++++..+..+|..+...|++++|.++|.++-.
T Consensus 12 ~~~~~~~~~~A~~~~~~~l~~~--------------------p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 71 (272)
T 3u4t_A 12 FLFKNNNYAEAIEVFNKLEAKK--------------------YNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATK 71 (272)
T ss_dssp HHHTTTCHHHHHHHHHHHHHTT--------------------CCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTT
T ss_pred HHHHhcCHHHHHHHHHHHHHhC--------------------CCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchh
Confidence 4567888999999988875332 34466788888899999999999999998755
Q ss_pred -----hhhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCChHHHHHHHHHhCCh
Q psy14927 79 -----YLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSC 134 (1074)
Q Consensus 79 -----~~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~ 134 (1074)
+..+..++..+|++++|.+..+ .+.+..+...+|..|...|++++|+++|.++-..
T Consensus 72 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 137 (272)
T 3u4t_A 72 AKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP 137 (272)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc
Confidence 3456667888899998888766 2566778889999999999999999988776554
No 165
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.46 E-value=5.5e-05 Score=86.22 Aligned_cols=228 Identities=14% Similarity=0.161 Sum_probs=144.5
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHhhCh--------------hhhhhHhhccCCHHHHHHHHHh-------cCC-----hH
Q psy14927 53 LKWWAQYIESTEDMDLAMKYYEEARDY--------------LSMVRVLCFLQDFSRAAELANA-------SGD-----TA 106 (1074)
Q Consensus 53 ~~~~a~~~e~~~~~~~A~~~y~~a~d~--------------~~~vr~l~~~~~~~~a~~i~~~-------~~~-----~~ 106 (1074)
+-+.|.++...|++++|..+|.+|-.. ..+..++..+|++++|.+..++ .++ ..
T Consensus 104 ~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 183 (378)
T 3q15_A 104 LFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQ 183 (378)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHH
Confidence 344588899999999999999998544 2345568889999888776653 222 22
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHcc-CChhHHHHHHHHhC
Q psy14927 107 AAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLET-IEPDKAVLLYHKAG 185 (1074)
Q Consensus 107 ~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~-~~~~~A~~ly~kaG 185 (1074)
+...+|..|...|++++|+++|. +|+++++..+....... .+..+|..+.. +++++|+.+|.+|
T Consensus 184 ~~~~lg~~y~~~~~~~~A~~~~~------~al~~~~~~~~~~~~~~--------~~~~lg~~y~~~~~~~~A~~~~~~a- 248 (378)
T 3q15_A 184 SLFVIAGNYDDFKHYDKALPHLE------AALELAMDIQNDRFIAI--------SLLNIANSYDRSGDDQMAVEHFQKA- 248 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHH------HHHHHHHHTTCHHHHHH--------HHHHHHHHHHHHTCHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhCCHHHHHHHHH------HHHHHHHHcCCHHHHHH--------HHHHHHHHHHHCCCHHHHHHHHHHH-
Confidence 45589999999999999999875 56777777653332211 12234444443 6666666666544
Q ss_pred ChHHHHHHHHhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcc-------hH---HHHHHHHHHHhcCCCCCChhHH
Q psy14927 186 ALHKALDLAFKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSR-------MK---EIYVMAANYLQSSDWKSQPELL 255 (1074)
Q Consensus 186 ~~~kAl~l~~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r-------~~---~l~~~aa~yl~~~~~~~~~~~~ 255 (1074)
++++-+...+.. ......-..+..+.|+.++++.+...+. ++ ..+..++..... .++++.+
T Consensus 249 -----l~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~ly~~---~~~~~~~ 319 (378)
T 3q15_A 249 -----AKVSREKVPDLL-PKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKE---TVDERKI 319 (378)
T ss_dssp -----HHHHHHHCGGGH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHHHHHHHHHHHSS---SCCHHHH
T ss_pred -----HHHHHhhCChhH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhC---CCcHHHH
Confidence 222221110000 0000111233455666666554443321 11 112222222222 3445778
Q ss_pred HHHHHHHHccCCHHHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHh
Q psy14927 256 KSIISFYSKGKAPHLLANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLLK 305 (1074)
Q Consensus 256 ~~i~~~Y~k~~~~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~ 305 (1074)
...+.++.+.+.+......+...|..- ..-|+|++|...+..++..-.+
T Consensus 320 ~~al~~~~~~~~~~~~~~~~~~la~~y-~~~g~~~~A~~~~~~al~~~~~ 368 (378)
T 3q15_A 320 HDLLSYFEKKNLHAYIEACARSAAAVF-ESSCHFEQAAAFYRKVLKAQED 368 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999998 9999999999999998876544
No 166
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.42 E-value=4.3e-06 Score=94.30 Aligned_cols=300 Identities=12% Similarity=-0.036 Sum_probs=142.0
Q ss_pred CCHHHHHHHHHHcCcccchhhhHhhhcHHHHHH-Hhhc-----CCC----hHHHHHHHHHHHhccCHHHHHHHHHHhhC-
Q psy14927 10 GDIDRAIRMFEKAETHQQHVPRMLLENTDKLEK-YIIQ-----SKD----PVLLKWWAQYIESTEDMDLAMKYYEEARD- 78 (1074)
Q Consensus 10 g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~----~~l~~~~a~~~e~~~~~~~A~~~y~~a~d- 78 (1074)
+.++.+...|+........ ...+++++.++.+ ...+ .++ ...+...|..+...|++++|..+|.++-.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 93 (368)
T 1fch_A 15 DFWDKLQAELEEMAKRDAE-AHPWLSDYDDLTSATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQ 93 (368)
T ss_dssp --------------------------------CHHHHCCCCCCSSCTTTTCSSHHHHHHHHHHTTCHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHHcCCch-hhHHHHHHHHHHhhhhhHHHhcCCCCcccchHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 4556666666666544422 3334456655554 3332 122 34577889999999999999999998743
Q ss_pred -------hhhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCc
Q psy14927 79 -------YLSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQAL 146 (1074)
Q Consensus 79 -------~~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~ 146 (1074)
+..+.+++..+|++++|.+..+. +.+..+...+|..|...|++++|+++|.++- ++.....
T Consensus 94 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~------~~~~~~~- 166 (368)
T 1fch_A 94 DPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWL------RYTPAYA- 166 (368)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH------HTSTTTG-
T ss_pred CCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH------HhCcCcH-
Confidence 24556678899999999887763 4677888899999999999999999987642 1111100
Q ss_pred hHHHHHHhhhcCchhHHHHHHHHccCC-hhHHHHHHHHhCChHHHHHHHHhhcc--CCc-chHHHHHHHHHHhcCCChhh
Q psy14927 147 DDQLWNLALSAGPSEQIEAATYLETIE-PDKAVLLYHKAGALHKALDLAFKLTL--SNS-GLVFQIKAMKCLLKSGDTNK 222 (1074)
Q Consensus 147 ~~~~~~l~~~~~~~~~~~~A~~~e~~~-~~~A~~ly~kaG~~~kAl~l~~~~~~--~~~-~~~~~~~a~k~l~~~~~~~~ 222 (1074)
..+..+. .......... ......+| +.|++.+|+.++.+.-. ++. ....+..-..++.+.|+.++
T Consensus 167 -~~~~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~ 235 (368)
T 1fch_A 167 -HLVTPAE---------EGAGGAGLGPSKRILGSLL-SDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDK 235 (368)
T ss_dssp -GGCC------------------------CTTHHHH-HHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHH
T ss_pred -HHHHHHH---------HHhhhhcccHHHHHHHHHh-hcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHH
Confidence 0000000 0000000000 01122222 33444444443333210 000 01112222334445566555
Q ss_pred HHHhhhhcchHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCCHHHHHHH--------------HHHHHhHHHHhhcC
Q psy14927 223 IIFFAGVSRMKEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKAPHLLANF--------------YVSCAQVEIDEFGN 288 (1074)
Q Consensus 223 ~i~~a~~~r~~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~~~~aa~~--------------~~~~a~~ei~e~~~ 288 (1074)
++.+...+.. . ...++.....+..+|.+.|.+++|..+ +...+... ..-|+
T Consensus 236 A~~~~~~al~---------~-----~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~-~~~g~ 300 (368)
T 1fch_A 236 AVDCFTAALS---------V-----RPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC-INLGA 300 (368)
T ss_dssp HHHHHHHHHH---------H-----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHHTC
T ss_pred HHHHHHHHHH---------h-----CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH-HHCCC
Confidence 5444332211 0 112233334444444444444444433 33445565 67799
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchH--HHHHHHHHHHHHHHHhhcCChHHHhhHHHHHH
Q psy14927 289 YEKGLGALNEAKRCLLKHNDSMYE--TLKSSVVEKLAEVEIDEFGNYEKGLGALNEAK 344 (1074)
Q Consensus 289 y~~a~~~l~~a~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 344 (1074)
|++|...+..+++...+....... .+.......+..++.. .|+++.|..++.++-
T Consensus 301 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~l 357 (368)
T 1fch_A 301 HREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSM-LGQSDAYGAADARDL 357 (368)
T ss_dssp HHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHH-HTCGGGHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHH-hCChHhHHHhHHHHH
Confidence 999999999998876655221110 0001122234566667 699999988776543
No 167
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.40 E-value=2.9e-06 Score=101.79 Aligned_cols=102 Identities=20% Similarity=0.161 Sum_probs=65.1
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhcc-ccccc--------cchhhhh------hh-h----------------
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAG-DKGVK--------LNLETMM------GT-K---------------- 837 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~-~~g~~--------~~~~~~~------~~-~---------------- 837 (1074)
.+|||||||+||++||+.+++ .++++.. ..|.. +....+. .. .
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 469999999999999999999 6777653 22210 0000000 00 0
Q ss_pred ---hH--------HHhhhhhhHHHHhhh-CCeEEEeeeEEEec--CCeE-EEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 838 ---SA--------AVKALTGGIAHLFKS-NKVTQLNGHGKITG--PNTV-TVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 838 ---~~--------~~~~l~~~~~~~l~~-~gV~~~~g~v~~id--~~~~-~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
.. ....+...+.+.+.+ .||+++.++|+.+. .+.+ .|.+.+| .++.+|.||+|||+.+.
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG--~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLG--VEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTS--CEEECSEEEECCTTCBT
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCC--cEEEeCEEEEccCCCcc
Confidence 00 001233445666666 59999877888764 3443 4777787 68999999999999863
No 168
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.39 E-value=3.8e-05 Score=85.08 Aligned_cols=227 Identities=12% Similarity=0.126 Sum_probs=132.0
Q ss_pred hccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHHH
Q psy14927 62 STEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRLC 141 (1074)
Q Consensus 62 ~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la 141 (1074)
++|++++|.+++.++...... .++...++++.|..... ..+..|..+|++++|+++|.+ |+++.
T Consensus 3 ~~~~~~eA~~~~~~a~k~~~~-~~~~~~~~~~~A~~~~~---------~a~~~~~~~g~~~~A~~~~~~------al~~~ 66 (307)
T 2ifu_A 3 AAQKISEAHEHIAKAEKYLKT-SFMKWKPDYDSAASEYA---------KAAVAFKNAKQLEQAKDAYLQ------EAEAH 66 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHCC-CSSSCSCCHHHHHHHHH---------HHHHHHHHTTCHHHHHHHHHH------HHHHH
T ss_pred ccchHHHHHHHHHHHHHHccc-cccCCCCCHHHHHHHHH---------HHHHHHHHcCCHHHHHHHHHH------HHHHH
Confidence 567788888888877654331 12222467777766643 346778888999999888764 45555
Q ss_pred HHhCchHHHHHHhhhcCchhHHHHHHHHccCChhHHHHHHHHhCChHHHHHHHHhhccCCcchHHHHHHHHHHhcCCChh
Q psy14927 142 KEQALDDQLWNLALSAGPSEQIEAATYLETIEPDKAVLLYHKAGALHKALDLAFKLTLSNSGLVFQIKAMKCLLKSGDTN 221 (1074)
Q Consensus 142 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~~~~~~A~~ly~kaG~~~kAl~l~~~~~~~~~~~~~~~~a~k~l~~~~~~~ 221 (1074)
.+.+....... .+ ..++.+|.+.|++.+|+..+.+ |++...+.|+..
T Consensus 67 ~~~~~~~~~a~--------~~------------~~lg~~~~~~g~~~~A~~~~~~-------------Al~l~~~~g~~~ 113 (307)
T 2ifu_A 67 ANNRSLFHAAK--------AF------------EQAGMMLKDLQRMPEAVQYIEK-------------ASVMYVENGTPD 113 (307)
T ss_dssp HHTTCHHHHHH--------HH------------HHHHHHHHHTTCGGGGHHHHHH-------------HHHHHHTTTCHH
T ss_pred HHcCCHHHHHH--------HH------------HHHHHHHHhCCCHHHHHHHHHH-------------HHHHHHHcCCHH
Confidence 55433222111 11 2334444445555555554444 223222344432
Q ss_pred hHHHhhhhcchHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCCHHHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHH
Q psy14927 222 KIIFFAGVSRMKEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKAPHLLANFYVSCAQVEIDEFGNYEKGLGALNEAKR 301 (1074)
Q Consensus 222 ~~i~~a~~~r~~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~ 301 (1074)
. ....+..++..+...+++.--..+++++.++...+....++..+..++..- ...|+|++|...+..+++
T Consensus 114 ~---------~a~~~~~lg~~~~~g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~-~~~g~~~~A~~~~~~al~ 183 (307)
T 2ifu_A 114 T---------AAMALDRAGKLMEPLDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLL-VRQQKFDEAAASLQKEKS 183 (307)
T ss_dssp H---------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred H---------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHH
Confidence 1 112333444444321111112344555666666666667778888888887 889999999999999999
Q ss_pred HHHhcCCCchHHHHHHHHHHHHHHHHhhcCChHHHhhHHHHHHHHHhhccC
Q psy14927 302 CLLKHNDSMYETLKSSVVEKLAEVEIDEFGNYEKGLGALNEAKRCLLKHND 352 (1074)
Q Consensus 302 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 352 (1074)
...+.+.. + . .....+....++.. .|+++.|+..|.++. ....|+.
T Consensus 184 ~~~~~~~~-~-~-~~~~~~~~g~~~~~-~g~~~~A~~~~~~al-~~p~~~~ 229 (307)
T 2ifu_A 184 MYKEMENY-P-T-CYKKCIAQVLVQLH-RADYVAAQKCVRESY-SIPGFSG 229 (307)
T ss_dssp HHHHTTCH-H-H-HHHHHHHHHHHHHH-TTCHHHHHHHHHHHT-TSTTSTT
T ss_pred HHHHcCCh-h-H-HHHHHHHHHHHHHH-cCCHHHHHHHHHHHh-CCCCCCC
Confidence 88876641 1 1 11122234555666 699999999999887 5444443
No 169
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.38 E-value=4.3e-05 Score=90.87 Aligned_cols=80 Identities=23% Similarity=0.304 Sum_probs=56.4
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhhC--------hhhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHH
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEARD--------YLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYE 116 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~d--------~~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~ 116 (1074)
...+...|..+...|++++|.++|.++=. +..+..++..+|++++|.+..+ .+.+..+.+.+|..+.
T Consensus 25 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 104 (537)
T 3fp2_A 25 AVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASANE 104 (537)
T ss_dssp HHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 44566667777778888888888877532 2345556777788887777665 2456677788888888
Q ss_pred hcCChHHHHHHHH
Q psy14927 117 NSGQFDEAIHFYS 129 (1074)
Q Consensus 117 ~~g~~~~Ai~~y~ 129 (1074)
..|++++|++.|.
T Consensus 105 ~~g~~~~A~~~~~ 117 (537)
T 3fp2_A 105 SLGNFTDAMFDLS 117 (537)
T ss_dssp HHTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHH
Confidence 8888888888774
No 170
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.37 E-value=2.4e-05 Score=92.35 Aligned_cols=81 Identities=22% Similarity=0.270 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHhhC-------hhhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhc
Q psy14927 51 VLLKWWAQYIESTEDMDLAMKYYEEARD-------YLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENS 118 (1074)
Q Consensus 51 ~l~~~~a~~~e~~~~~~~A~~~y~~a~d-------~~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~ 118 (1074)
..+...|..+...|+|++|.++|.++-. +..+..++..+|++++|.+..+ .+.+..+.+.+|..|...
T Consensus 7 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 86 (514)
T 2gw1_A 7 LALKDKGNQFFRNKKYDDAIKYYNWALELKEDPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANEGL 86 (514)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhcCccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 4556667777777777777777777643 3445556777777777777655 345667788888888888
Q ss_pred CChHHHHHHHHHh
Q psy14927 119 GQFDEAIHFYSVA 131 (1074)
Q Consensus 119 g~~~~Ai~~y~~a 131 (1074)
|++++|++.|.++
T Consensus 87 g~~~~A~~~~~~~ 99 (514)
T 2gw1_A 87 GKFADAMFDLSVL 99 (514)
T ss_dssp TCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHH
Confidence 8888888888765
No 171
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.36 E-value=8.5e-05 Score=84.70 Aligned_cols=236 Identities=10% Similarity=0.095 Sum_probs=126.0
Q ss_pred HHHHHHhccCHHHHHHHHHHhhCh--------------hhhhhHhhccCCHHHHHHHHHh-------cCC-----hHHHH
Q psy14927 56 WAQYIESTEDMDLAMKYYEEARDY--------------LSMVRVLCFLQDFSRAAELANA-------SGD-----TAAAY 109 (1074)
Q Consensus 56 ~a~~~e~~~~~~~A~~~y~~a~d~--------------~~~vr~l~~~~~~~~a~~i~~~-------~~~-----~~~~~ 109 (1074)
.|.++...|++++|.++|.+|-.. ..+..++..+|++++|.+..++ .++ ..+..
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 188 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHS 188 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 588889999999999999998543 3345557778888888776553 222 13566
Q ss_pred HHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHcc-CChhHHHHHHHHhCChH
Q psy14927 110 HLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLET-IEPDKAVLLYHKAGALH 188 (1074)
Q Consensus 110 ~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~-~~~~~A~~ly~kaG~~~ 188 (1074)
.+|..|...|++++|+++|. +|++++++.+....... .+...|..+.. +++++|..+|.+
T Consensus 189 ~lg~~~~~~g~~~~A~~~~~------~al~~~~~~~~~~~~~~--------~~~~lg~~y~~~g~~~~A~~~~~~----- 249 (383)
T 3ulq_A 189 LFATNFLDLKQYEDAISHFQ------KAYSMAEAEKQPQLMGR--------TLYNIGLCKNSQSQYEDAIPYFKR----- 249 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHH------HHHHHHHHTTCHHHHHH--------HHHHHHHHHHHTTCHHHHHHHHHH-----
T ss_pred HHHHHHHHhcCHHHHHHHHH------HHHHHHHHcCChHHHHH--------HHHHHHHHHHHCCCHHHHHHHHHH-----
Confidence 88899999999999998864 56777766642221111 12223333333 445555554432
Q ss_pred HHHHHHHhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcC-CCCCChhHHHHHHHHHHccCC
Q psy14927 189 KALDLAFKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSS-DWKSQPELLKSIISFYSKGKA 267 (1074)
Q Consensus 189 kAl~l~~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~-~~~~~~~~~~~i~~~Y~k~~~ 267 (1074)
|++++.+ .++. ......+...|..+..+ +++.--..++.++....+.+.
T Consensus 250 -al~~~~~--------------------~~~~---------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 299 (383)
T 3ulq_A 250 -AIAVFEE--------------------SNIL---------PSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGD 299 (383)
T ss_dssp -HHHHHHH--------------------TTCG---------GGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHh--------------------hccc---------hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCC
Confidence 2232222 1210 00111222222222222 000011111122222222222
Q ss_pred HHHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhhcCChHHHhhHHHHHHHHH
Q psy14927 268 PHLLANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEIDEFGNYEKGLGALNEAKRCL 347 (1074)
Q Consensus 268 ~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 347 (1074)
...... +...+..- ...|++ ..+.+|+..+.+.+... .. ......+..+|.+ .|++++|...+.++-...
T Consensus 300 ~~~~~~-~~~l~~~~-~~~~~~----~~~~~al~~~~~~~~~~--~~-~~~~~~la~~y~~-~g~~~~A~~~~~~al~~~ 369 (383)
T 3ulq_A 300 VIYLSE-FEFLKSLY-LSGPDE----EAIQGFFDFLESKMLYA--DL-EDFAIDVAKYYHE-RKNFQKASAYFLKVEQVR 369 (383)
T ss_dssp HHHHHH-HHHHHHHH-TSSCCH----HHHHHHHHHHHHTTCHH--HH-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHHHHHH-hCCCcH----HHHHHHHHHHHHCcCHH--HH-HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 222222 22344444 455665 55667777777764322 11 2233356777888 799999999999887765
Q ss_pred hhc
Q psy14927 348 LKH 350 (1074)
Q Consensus 348 ~~~ 350 (1074)
++.
T Consensus 370 ~~i 372 (383)
T 3ulq_A 370 QLI 372 (383)
T ss_dssp TSC
T ss_pred HHh
Confidence 443
No 172
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.34 E-value=0.00014 Score=82.61 Aligned_cols=248 Identities=15% Similarity=0.130 Sum_probs=152.5
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHhhCh------------hhhhhHhhccCCHHHHHHHHHh-------cCC----hHH
Q psy14927 51 VLLKWWAQYIESTEDMDLAMKYYEEARDY------------LSMVRVLCFLQDFSRAAELANA-------SGD----TAA 107 (1074)
Q Consensus 51 ~l~~~~a~~~e~~~~~~~A~~~y~~a~d~------------~~~vr~l~~~~~~~~a~~i~~~-------~~~----~~~ 107 (1074)
..+...|..+...|++++|..+|.++-+. ..+..++...|++++|.+..++ .++ ..+
T Consensus 10 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 89 (406)
T 3sf4_A 10 LELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKA 89 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 34567799999999999999999886433 2345567789999988886542 232 235
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHcc-CC-------------
Q psy14927 108 AYHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLET-IE------------- 173 (1074)
Q Consensus 108 ~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~-~~------------- 173 (1074)
...+|..|...|++++|+++|. +|++++...+...... ..+...|..+.. ++
T Consensus 90 ~~~la~~~~~~g~~~~A~~~~~------~al~~~~~~~~~~~~~--------~~~~~l~~~~~~~g~~~~~~~~~~~~~~ 155 (406)
T 3sf4_A 90 SGNLGNTLKVLGNFDEAIVCCQ------RHLDISRELNDKVGEA--------RALYNLGNVYHAKGKSFGCPGPQDVGEF 155 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHH------HHHHHHHHHTCHHHHH--------HHHHHHHHHHHHHHHTCC-------CCC
T ss_pred HHHHHHHHHHcCCHHHHHHHHH------HHHHHHHhcccccchH--------HHHHHHHHHHHHcCCcccccccchhhhh
Confidence 6688999999999999999865 4566666553221111 112223333322 33
Q ss_pred -------hhHHHHHHHHhCChHHHHHHHHhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcC
Q psy14927 174 -------PDKAVLLYHKAGALHKALDLAFKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSS 246 (1074)
Q Consensus 174 -------~~~A~~ly~kaG~~~kAl~l~~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~ 246 (1074)
+++|..+|. +|++++.+ .++... ...++...+..+...
T Consensus 156 ~~~a~~~~~~A~~~~~------~al~~~~~--------------------~~~~~~---------~~~~~~~la~~~~~~ 200 (406)
T 3sf4_A 156 PEEVRDALQAAVDFYE------ENLSLVTA--------------------LGDRAA---------QGRAFGNLGNTHYLL 200 (406)
T ss_dssp CHHHHHHHHHHHHHHH------HHHHHHHH--------------------TTCHHH---------HHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHH------HHHHHHHh--------------------ccCcHH---------HHHHHHHHHHHHHHc
Confidence 444444442 23333332 222211 111222223222221
Q ss_pred -CCCCChhHHHHHHHHHHccCCHHHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH
Q psy14927 247 -DWKSQPELLKSIISFYSKGKAPHLLANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEV 325 (1074)
Q Consensus 247 -~~~~~~~~~~~i~~~Y~k~~~~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 325 (1074)
+++.--..++.+++.+.+.+.....+..+...+... ...|+|++|...+.+++....+.+... ........+..+
T Consensus 201 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~~~~~~~~---~~~~~~~~la~~ 276 (406)
T 3sf4_A 201 GNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAY-IFLGEFETASEYYKKTLLLARQLKDRA---VEAQSCYSLGNT 276 (406)
T ss_dssp TBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH-HHcCChHHHHHHHHHHHHHHHhCcCch---HHHHHHHHHHHH
Confidence 112222444455555555555566667777888887 789999999999999999888765421 122233345677
Q ss_pred HHhhcCChHHHhhHHHHHHHHHhhccC
Q psy14927 326 EIDEFGNYEKGLGALNEAKRCLLKHND 352 (1074)
Q Consensus 326 ~~~~~~~~~~a~~~~~~~~~~~~~~~~ 352 (1074)
+.. .|+++.|...|.++-....+.++
T Consensus 277 ~~~-~g~~~~A~~~~~~a~~~~~~~~~ 302 (406)
T 3sf4_A 277 YTL-LQDYEKAIDYHLKHLAIAQELND 302 (406)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHH-hCcHHHHHHHHHHHHHHHHhcCC
Confidence 778 79999999999999888777654
No 173
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.34 E-value=1e-05 Score=89.25 Aligned_cols=127 Identities=14% Similarity=0.133 Sum_probs=89.7
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhh-------hHh--hhcHHHHHHHhhc-----CCChHHHHHHHHHHHhcc-CHHHH
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVP-------RML--LENTDKLEKYIIQ-----SKDPVLLKWWAQYIESTE-DMDLA 69 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~-------~~~--~~~~~~~~~~~~~-----~~~~~l~~~~a~~~e~~~-~~~~A 69 (1074)
.+...|++++|+.+|+++-..+..-+ ..+ .+++.++..+..+ ++++..|..+|..+...| ++++|
T Consensus 31 ~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A 110 (330)
T 3hym_B 31 RHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHA 110 (330)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHH
Confidence 45667999999999998754432222 111 2456655555444 467888888899998988 89999
Q ss_pred HHHHHHhhC--------hhhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 70 MKYYEEARD--------YLSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 70 ~~~y~~a~d--------~~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
.++|.++-. +..+..++...|++++|.+..+. +.+......+|..|...|++++|+++|.++
T Consensus 111 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 185 (330)
T 3hym_B 111 RRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQA 185 (330)
T ss_dssp HHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 999888644 24456667788888888877652 345667777888888888888888877654
No 174
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.33 E-value=0.00017 Score=78.97 Aligned_cols=247 Identities=15% Similarity=0.123 Sum_probs=149.6
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHhhCh------------hhhhhHhhccCCHHHHHHHHHh-------cCC----hHHH
Q psy14927 52 LLKWWAQYIESTEDMDLAMKYYEEARDY------------LSMVRVLCFLQDFSRAAELANA-------SGD----TAAA 108 (1074)
Q Consensus 52 l~~~~a~~~e~~~~~~~A~~~y~~a~d~------------~~~vr~l~~~~~~~~a~~i~~~-------~~~----~~~~ 108 (1074)
-+...|..+...|++++|.++|.++-.. ..+..++...|++++|.+..+. .++ ..+.
T Consensus 7 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 86 (338)
T 3ro2_A 7 ELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKAS 86 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 3455689999999999999999986432 2445567789999998887553 222 2356
Q ss_pred HHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHcc-CC--------------
Q psy14927 109 YHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLET-IE-------------- 173 (1074)
Q Consensus 109 ~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~-~~-------------- 173 (1074)
..+|..|...|++++|+++|.+ |++++...+...... ..+...|..+.. ++
T Consensus 87 ~~l~~~~~~~g~~~~A~~~~~~------al~~~~~~~~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 152 (338)
T 3ro2_A 87 GNLGNTLKVLGNFDEAIVCCQR------HLDISRELNDKVGEA--------RALYNLGNVYHAKGKSFGCPGPQDTGEFP 152 (338)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH------HHHHHHHTTCHHHHH--------HHHHHHHHHHHHHHHTSSSSSCC----CC
T ss_pred HHHHHHHHHccCHHHHHHHHHH------HHHHHHHhcCchHHH--------HHHHHHHHHHHHcCcccccchhhhhhhhh
Confidence 6889999999999999998754 566666553322111 111223333322 33
Q ss_pred ------hhHHHHHHHHhCChHHHHHHHHhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcC-
Q psy14927 174 ------PDKAVLLYHKAGALHKALDLAFKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSS- 246 (1074)
Q Consensus 174 ------~~~A~~ly~kaG~~~kAl~l~~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~- 246 (1074)
+++|..+|. +|++++-+ .++.. ....++...+..+...
T Consensus 153 ~~a~~~~~~A~~~~~------~a~~~~~~--------------------~~~~~---------~~~~~~~~l~~~~~~~~ 197 (338)
T 3ro2_A 153 EDVRNALQAAVDLYE------ENLSLVTA--------------------LGDRA---------AQGRAFGNLGNTHYLLG 197 (338)
T ss_dssp HHHHHHHHHHHHHHH------HHHHHHHH--------------------HTCHH---------HHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHH------HHHHHHHh--------------------cCCHH---------HHHHHHHHHHHHHHHhC
Confidence 344444432 23333322 11111 0111222223222221
Q ss_pred CCCCChhHHHHHHHHHHccCCHHHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHH
Q psy14927 247 DWKSQPELLKSIISFYSKGKAPHLLANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVE 326 (1074)
Q Consensus 247 ~~~~~~~~~~~i~~~Y~k~~~~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 326 (1074)
+++.--..++.+++.+...+.....+..+...+... ...|+|+.|...+.+++....+.+... ........+..++
T Consensus 198 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~A~~~~~~al~~~~~~~~~~---~~~~~~~~la~~~ 273 (338)
T 3ro2_A 198 NFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAY-IFLGEFETASEYYKKTLLLARQLKDRA---VEAQSCYSLGNTY 273 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHHHhhcchh---HHHHHHHHHHHHH
Confidence 122222444445555555555566666777778887 788999999999999999888765421 1222333456777
Q ss_pred HhhcCChHHHhhHHHHHHHHHhhccC
Q psy14927 327 IDEFGNYEKGLGALNEAKRCLLKHND 352 (1074)
Q Consensus 327 ~~~~~~~~~a~~~~~~~~~~~~~~~~ 352 (1074)
.. .|+++.|...|.++-....+.++
T Consensus 274 ~~-~g~~~~A~~~~~~a~~~~~~~~~ 298 (338)
T 3ro2_A 274 TL-LQDYEKAIDYHLKHLAIAQELKD 298 (338)
T ss_dssp HH-TTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HH-hcCHHHHHHHHHHHHHHHHhcCC
Confidence 78 79999999999998887666654
No 175
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.32 E-value=7.6e-05 Score=85.50 Aligned_cols=247 Identities=12% Similarity=0.094 Sum_probs=149.6
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHhhCh------------hhhhhHhhccCCHHHHHHHHHh-------cCC----hHHH
Q psy14927 52 LLKWWAQYIESTEDMDLAMKYYEEARDY------------LSMVRVLCFLQDFSRAAELANA-------SGD----TAAA 108 (1074)
Q Consensus 52 l~~~~a~~~e~~~~~~~A~~~y~~a~d~------------~~~vr~l~~~~~~~~a~~i~~~-------~~~----~~~~ 108 (1074)
.+...|..+...|++++|.++|.++-+. ..+..++..+|++++|.+..++ .++ ..+.
T Consensus 50 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 129 (411)
T 4a1s_A 50 ELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSS 129 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHH
Confidence 3445689999999999999999986432 3445567788999998887552 222 2356
Q ss_pred HHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHcc-CC--------------
Q psy14927 109 YHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLET-IE-------------- 173 (1074)
Q Consensus 109 ~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~-~~-------------- 173 (1074)
..+|..|...|++++|+++|.+ |++++++.+...... ..+...|..+.. ++
T Consensus 130 ~~l~~~~~~~g~~~~A~~~~~~------al~~~~~~~~~~~~~--------~~~~~l~~~~~~~g~~~~~~~~~~~~~~a 195 (411)
T 4a1s_A 130 GNLGNTLKVMGRFDEAAICCER------HLTLARQLGDRLSEG--------RALYNLGNVYHAKGKHLGQRNPGKFGDDV 195 (411)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH------HHHHHHHHTCHHHHH--------HHHHHHHHHHHHHHHHHHHHSTTCCCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHH------HHHHHHHhhchHHHH--------HHHHHHHHHHHHcCcccccccchhhhhhh
Confidence 6889999999999999998764 566666554222111 111223333322 34
Q ss_pred ---hhHHHHHHHHhCChHHHHHHHHhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcC-CCC
Q psy14927 174 ---PDKAVLLYHKAGALHKALDLAFKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSS-DWK 249 (1074)
Q Consensus 174 ---~~~A~~ly~kaG~~~kAl~l~~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~-~~~ 249 (1074)
+++|..+|. +|++++.+ .++. ......+...+..+... +++
T Consensus 196 ~~~~~~A~~~~~------~al~~~~~--------------------~~~~---------~~~~~~~~~la~~~~~~g~~~ 240 (411)
T 4a1s_A 196 KEALTRAVEFYQ------ENLKLMRD--------------------LGDR---------GAQGRACGNLGNTYYLLGDFQ 240 (411)
T ss_dssp HHHHHHHHHHHH------HHHHHHHH--------------------HTCH---------HHHHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHH------HHHHHHHH--------------------cCCH---------HHHHHHHHHHHHHHHHcCChH
Confidence 444444433 23333322 1111 01111223333333222 112
Q ss_pred CChhHHHHHHHHHHccCCHHHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhh
Q psy14927 250 SQPELLKSIISFYSKGKAPHLLANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEIDE 329 (1074)
Q Consensus 250 ~~~~~~~~i~~~Y~k~~~~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (1074)
.--..++.+++.+...+.....+..+...+... ...|+|++|...+.+++....+.+... ........+..++..
T Consensus 241 ~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~~~~~~~~---~~~~~~~~la~~~~~- 315 (411)
T 4a1s_A 241 AAIEHHQERLRIAREFGDRAAERRANSNLGNSH-IFLGQFEDAAEHYKRTLALAVELGERE---VEAQSCYSLGNTYTL- 315 (411)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-HTTTCHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH-HHCcCHHHHHHHHHHHHHHHHHcCCHH---HHHHHHHHHHHHHHH-
Confidence 222333444444544455555566777778877 788999999999999999888764322 122233345677778
Q ss_pred cCChHHHhhHHHHHHHHHhhccC
Q psy14927 330 FGNYEKGLGALNEAKRCLLKHND 352 (1074)
Q Consensus 330 ~~~~~~a~~~~~~~~~~~~~~~~ 352 (1074)
.|+++.|...|.++-....+.++
T Consensus 316 ~g~~~~A~~~~~~al~~~~~~~~ 338 (411)
T 4a1s_A 316 LHEFNTAIEYHNRHLAIAQELGD 338 (411)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHHHHHHCCC
Confidence 79999999999999888777654
No 176
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.31 E-value=2.2e-05 Score=88.57 Aligned_cols=66 Identities=11% Similarity=-0.049 Sum_probs=36.5
Q ss_pred HHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHH---HHHHHHHHHHHHHHhhcCChHHHhhHHHH
Q psy14927 275 YVSCAQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYET---LKSSVVEKLAEVEIDEFGNYEKGLGALNE 342 (1074)
Q Consensus 275 ~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 342 (1074)
+...+... ...|+|++|...+..|++.-.+.....+.. +...+-..+...+.. +|.++.+.+++.+
T Consensus 284 ~~~l~~~~-~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~a~~~~~~ 352 (365)
T 4eqf_A 284 RYNLGISC-INLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSL-MDQPELFQAANLG 352 (365)
T ss_dssp HHHHHHHH-HHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHH-HTCHHHHHHHHTT
T ss_pred HHHHHHHH-HHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHH-cCcHHHHHHHHHh
Confidence 33445555 667889999999999888777654422111 111222234455555 6888776665444
No 177
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.30 E-value=4.2e-05 Score=84.28 Aligned_cols=86 Identities=13% Similarity=0.073 Sum_probs=69.3
Q ss_pred CCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh--------hhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHH
Q psy14927 47 SKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY--------LSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLAR 113 (1074)
Q Consensus 47 ~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~--------~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~ 113 (1074)
.+++.++...|+.+...|++++|.++|.++-.. ...+.++..+|++++|..+.+ .+.+..+.+.+|.
T Consensus 19 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 98 (330)
T 3hym_B 19 QENLDVVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGC 98 (330)
T ss_dssp -CCCTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHH
Confidence 456778889999999999999999999985221 235566889999999998766 3467788999999
Q ss_pred HHHhcC-ChHHHHHHHHHhC
Q psy14927 114 QYENSG-QFDEAIHFYSVAG 132 (1074)
Q Consensus 114 ~~~~~g-~~~~Ai~~y~~a~ 132 (1074)
.+...| ++++|+++|.++-
T Consensus 99 ~~~~~~~~~~~A~~~~~~a~ 118 (330)
T 3hym_B 99 YYLMVGHKNEHARRYLSKAT 118 (330)
T ss_dssp HHHHSCSCHHHHHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHHHHHH
Confidence 999999 9999999887653
No 178
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.30 E-value=0.0001 Score=87.23 Aligned_cols=16 Identities=6% Similarity=-0.058 Sum_probs=12.8
Q ss_pred CChHHHhhHHHHHHHH
Q psy14927 331 GNYEKGLGALNEAKRC 346 (1074)
Q Consensus 331 ~~~~~a~~~~~~~~~~ 346 (1074)
+|+++|+..|.+++..
T Consensus 381 ~~~~~A~~~~~~A~~~ 396 (490)
T 2xm6_A 381 KDEQQAAIWMRKAAEQ 396 (490)
T ss_dssp CCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhC
Confidence 7888888888888763
No 179
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.24 E-value=1.1e-05 Score=84.53 Aligned_cols=22 Identities=27% Similarity=0.431 Sum_probs=17.8
Q ss_pred HhhhcCCHHHHHHHHHHcCccc
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQ 26 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~ 26 (1074)
.+.+.|++++|+..|+++-..+
T Consensus 14 ~~~~~g~~~~A~~~~~~al~~~ 35 (217)
T 2pl2_A 14 QLYALGRYDAALTLFERALKEN 35 (217)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTS
T ss_pred HHHHcCCHHHHHHHHHHHHHhC
Confidence 3567899999999999887554
No 180
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.20 E-value=4.5e-05 Score=81.71 Aligned_cols=248 Identities=15% Similarity=0.069 Sum_probs=137.1
Q ss_pred hcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhc--CCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhH
Q psy14927 8 KNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQ--SKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRV 85 (1074)
Q Consensus 8 ~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~ 85 (1074)
..|++++|+.+|+++-..- .+.... ......+..+|..+...|++++|.++|.++-+....
T Consensus 13 ~~~~~~~A~~~~~~al~~~--------------~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~--- 75 (283)
T 3edt_B 13 GLVPRGSAVPLCKQALEDL--------------EKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREK--- 75 (283)
T ss_dssp CCSCSSSHHHHHHHHHHHH--------------HHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---
T ss_pred CCCCHHHHHHHHHHHHHHH--------------HHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH---
Confidence 4678888888888877322 111111 122557788899999999999999999776433110
Q ss_pred hhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHH
Q psy14927 86 LCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEA 165 (1074)
Q Consensus 86 l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~ 165 (1074)
....+++ ....+...+|..|...|++++|+++|.+ |++++++.+-.+.- .....+...
T Consensus 76 ~~~~~~~----------~~~~~~~~l~~~~~~~g~~~~A~~~~~~------al~~~~~~~~~~~~------~~~~~~~~l 133 (283)
T 3edt_B 76 TLGKDHP----------AVAATLNNLAVLYGKRGKYKEAEPLCKR------ALEIREKVLGKFHP------DVAKQLNNL 133 (283)
T ss_dssp HTCTTCH----------HHHHHHHHHHHHHHTTTCHHHHHHHHHH------HHHHHHHHHCTTCH------HHHHHHHHH
T ss_pred HcCCcch----------HHHHHHHHHHHHHHHhccHHHHHHHHHH------HHHHHHHHcCCCCh------HHHHHHHHH
Confidence 0001111 1234677899999999999999999865 55555544110000 001223345
Q ss_pred HHHHcc-CChhHHHHHHHHhCChHHHHHHHHhhccCCcc--hHHHHHHHHHHhcCCChhhHHHhhhhcch----------
Q psy14927 166 ATYLET-IEPDKAVLLYHKAGALHKALDLAFKLTLSNSG--LVFQIKAMKCLLKSGDTNKIIFFAGVSRM---------- 232 (1074)
Q Consensus 166 A~~~e~-~~~~~A~~ly~kaG~~~kAl~l~~~~~~~~~~--~~~~~~a~k~l~~~~~~~~~i~~a~~~r~---------- 232 (1074)
|..+.. +++++|..+|.++ ++++.+....+.. ...+..-..++.+.|+.++++.+...+..
T Consensus 134 a~~~~~~g~~~~A~~~~~~a------l~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~ 207 (283)
T 3edt_B 134 ALLCQNQGKAEEVEYYYRRA------LEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSV 207 (283)
T ss_dssp HHHHHTTTCHHHHHHHHHHH------HHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSC
T ss_pred HHHHHHcCCHHHHHHHHHHH------HHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCc
Confidence 555544 6677777776543 3333222111110 00112223445666777776665554433
Q ss_pred ----HHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCC-HHHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHH
Q psy14927 233 ----KEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKA-PHLLANFYVSCAQVEIDEFGNYEKGLGALNEAKR 301 (1074)
Q Consensus 233 ----~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~-~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~ 301 (1074)
..+|..++.+............+..+..++..... ....+..+...+... ...|+|++|...+..+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~ 280 (283)
T 3edt_B 208 NGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALY-RRQGKLEAAHTLEDCASR 280 (283)
T ss_dssp CSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHT
T ss_pred chhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHH
Confidence 12444555555555555555666666666666653 355566777778887 788999999999888765
No 181
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.19 E-value=8.4e-07 Score=90.26 Aligned_cols=97 Identities=15% Similarity=0.111 Sum_probs=68.1
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhccccccc-c---chhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEE
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVK-L---NLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKI 866 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~-~---~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~ 866 (1074)
+|+||||||+|+++|..|++ +++++.+..... . .++.++.. .....+...+.+.+++.||+++.++|+.
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~gv~v~~~~v~~ 80 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDE--PSGEELLRRLEAHARRYGAEVRPGVVKG 80 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTC--CCHHHHHHHHHHHHHHTTCEEEECCCCE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCC--CCHHHHHHHHHHHHHHcCCEEEeCEEEE
Confidence 48999999999999999998 677765522111 0 00111000 0113455667778888999999997777
Q ss_pred ecC--CeEEEEeCCCCeeEEEcCeEEEccCCCC
Q psy14927 867 TGP--NTVTVIKSDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 867 id~--~~~~v~~~~G~~~~i~~d~lIIATG~~p 897 (1074)
++. +.+.+.+++| ++.+|.||+|||..|
T Consensus 81 i~~~~~~~~v~~~~g---~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 81 VRDMGGVFEVETEEG---VEKAERLLLCTHKDP 110 (180)
T ss_dssp EEECSSSEEEECSSC---EEEEEEEEECCTTCC
T ss_pred EEEcCCEEEEEECCC---EEEECEEEECCCCCC
Confidence 653 4567777776 799999999999997
No 182
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.17 E-value=2.5e-05 Score=85.98 Aligned_cols=127 Identities=14% Similarity=0.054 Sum_probs=92.3
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhH-------h--hhcHHHHHHHhhc-----CCChHHHHHHHHHHHhccCHHHHH
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRM-------L--LENTDKLEKYIIQ-----SKDPVLLKWWAQYIESTEDMDLAM 70 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~-------~--~~~~~~~~~~~~~-----~~~~~l~~~~a~~~e~~~~~~~A~ 70 (1074)
.+...|++++|+.+|+++-..+..-+.. + .+++..+..+..+ ++++..+..+|..+...|++++|.
T Consensus 30 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~ 109 (327)
T 3cv0_A 30 SMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAAL 109 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCCHHHHH
Confidence 3567899999999999986543322222 2 2466666555554 567888999999999999999999
Q ss_pred HHHHHhhChhh-----h-----------------hh-HhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChH
Q psy14927 71 KYYEEARDYLS-----M-----------------VR-VLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFD 122 (1074)
Q Consensus 71 ~~y~~a~d~~~-----~-----------------vr-~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~ 122 (1074)
++|.++-.... . .. ++...|++++|.+..++ +.+......+|..|...|+++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 189 (327)
T 3cv0_A 110 ASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYD 189 (327)
T ss_dssp HHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHH
Confidence 99988643211 0 22 47778888998887663 456778889999999999999
Q ss_pred HHHHHHHHh
Q psy14927 123 EAIHFYSVA 131 (1074)
Q Consensus 123 ~Ai~~y~~a 131 (1074)
+|+++|.++
T Consensus 190 ~A~~~~~~~ 198 (327)
T 3cv0_A 190 SAAANLRRA 198 (327)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999887653
No 183
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.16 E-value=1.6e-05 Score=80.21 Aligned_cols=105 Identities=18% Similarity=0.183 Sum_probs=81.5
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh------
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY------ 79 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~------ 79 (1074)
..++|++++|+..|+++-..+ ++++..+..+|..+...|++++|.++|..+-..
T Consensus 15 ~~~~g~~~~A~~~~~~al~~~--------------------p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 74 (184)
T 3vtx_A 15 KRTKGDFDGAIRAYKKVLKAD--------------------PNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAE 74 (184)
T ss_dssp HHHHTCHHHHHHHHHHHHHHC--------------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHH
T ss_pred HHHcCCHHHHHHHHHHHHHhC--------------------CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHH
Confidence 467899999999999886433 455778888888888889999998888886332
Q ss_pred --hhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCChHHHHHHHHH
Q psy14927 80 --LSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQFDEAIHFYSV 130 (1074)
Q Consensus 80 --~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~ 130 (1074)
.....++...++++.|.+... .+.+..+...+|..|.+.|++++|++.|.+
T Consensus 75 ~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 132 (184)
T 3vtx_A 75 AYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEK 132 (184)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 234455777888888877655 356778888999999999999999998765
No 184
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.10 E-value=2.5e-05 Score=82.68 Aligned_cols=126 Identities=14% Similarity=0.163 Sum_probs=98.2
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHh---------hhcHHHHHHHhhc-----CCC-------hHHHHHHHHHHHhc
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRML---------LENTDKLEKYIIQ-----SKD-------PVLLKWWAQYIEST 63 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~---------~~~~~~~~~~~~~-----~~~-------~~l~~~~a~~~e~~ 63 (1074)
.+...|++++|+.+|+++-..+ .-+..+ .+++.++.++..+ ++. +..+..+|..+...
T Consensus 14 ~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 92 (258)
T 3uq3_A 14 KFYKARQFDEAIEHYNKAWELH-KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKL 92 (258)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHS-CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhccHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHc
Confidence 3567899999999999986554 322222 2466666655554 111 57888899999999
Q ss_pred cCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 64 EDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 64 ~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
|++++|.++|.++-....-..++..+|++++|.+..+. +.+......+|..|...|++++|+++|.++
T Consensus 93 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 165 (258)
T 3uq3_A 93 GDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEM 165 (258)
T ss_dssp TCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 99999999999999888888889999999999888763 234556779999999999999999988775
No 185
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.09 E-value=8.1e-05 Score=82.38 Aligned_cols=137 Identities=18% Similarity=0.163 Sum_probs=73.6
Q ss_pred hhcCCHHHHHHHHHHcCcccchhhhHh--hhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhh
Q psy14927 7 MKNGDIDRAIRMFEKAETHQQHVPRML--LENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVR 84 (1074)
Q Consensus 7 ~~~g~~~eA~~~Ye~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr 84 (1074)
++.|++++|..+++++...... .++ -.++..+..+ ....+..+...|+|++|.++|.++-+.
T Consensus 2 ~~~~~~~eA~~~~~~a~k~~~~--~~~~~~~~~~~A~~~---------~~~a~~~~~~~g~~~~A~~~~~~al~~----- 65 (307)
T 2ifu_A 2 IAAQKISEAHEHIAKAEKYLKT--SFMKWKPDYDSAASE---------YAKAAVAFKNAKQLEQAKDAYLQEAEA----- 65 (307)
T ss_dssp -CHHHHHHHHHHHHHHHHHHCC--CSSSCSCCHHHHHHH---------HHHHHHHHHHTTCHHHHHHHHHHHHHH-----
T ss_pred CccchHHHHHHHHHHHHHHccc--cccCCCCCHHHHHHH---------HHHHHHHHHHcCCHHHHHHHHHHHHHH-----
Confidence 4578899999999988743311 111 0123222222 222244444555555555555444322
Q ss_pred HhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHH
Q psy14927 85 VLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIE 164 (1074)
Q Consensus 85 ~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~ 164 (1074)
...++++..+. .....+|..|..+|++++|+++|. .|+++..+.|...... ..+..
T Consensus 66 -~~~~~~~~~~a---------~~~~~lg~~~~~~g~~~~A~~~~~------~Al~l~~~~g~~~~~a--------~~~~~ 121 (307)
T 2ifu_A 66 -HANNRSLFHAA---------KAFEQAGMMLKDLQRMPEAVQYIE------KASVMYVENGTPDTAA--------MALDR 121 (307)
T ss_dssp -HHHTTCHHHHH---------HHHHHHHHHHHHTTCGGGGHHHHH------HHHHHHHTTTCHHHHH--------HHHHH
T ss_pred -HHHcCCHHHHH---------HHHHHHHHHHHhCCCHHHHHHHHH------HHHHHHHHcCCHHHHH--------HHHHH
Confidence 22333332222 235578899999999999999876 4566666554333221 12234
Q ss_pred HHHHHccCChhHHHHHHHH
Q psy14927 165 AATYLETIEPDKAVLLYHK 183 (1074)
Q Consensus 165 ~A~~~e~~~~~~A~~ly~k 183 (1074)
+|..|+.+++++|+.+|.+
T Consensus 122 lg~~~~~g~~~~A~~~~~~ 140 (307)
T 2ifu_A 122 AGKLMEPLDLSKAVHLYQQ 140 (307)
T ss_dssp HHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHH
Confidence 5555555556666666653
No 186
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.08 E-value=4.5e-05 Score=85.77 Aligned_cols=28 Identities=11% Similarity=-0.013 Sum_probs=14.3
Q ss_pred CChHHHHHHHHHHHhccCHHHHHHHHHH
Q psy14927 48 KDPVLLKWWAQYIESTEDMDLAMKYYEE 75 (1074)
Q Consensus 48 ~~~~l~~~~a~~~e~~~~~~~A~~~y~~ 75 (1074)
+++..+..+|..+...|++++|.++|.+
T Consensus 130 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 157 (368)
T 1fch_A 130 DNQTALMALAVSFTNESLQRQACEILRD 157 (368)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3444555555555555555555555544
No 187
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.08 E-value=0.00018 Score=78.96 Aligned_cols=100 Identities=16% Similarity=0.169 Sum_probs=59.4
Q ss_pred CHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHH-------hcCCh----HHHHHHHHHHHhcCChHHHHHHHHHhCC
Q psy14927 65 DMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELAN-------ASGDT----AAAYHLARQYENSGQFDEAIHFYSVAGS 133 (1074)
Q Consensus 65 ~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~-------~~~~~----~~~~~la~~~~~~g~~~~Ai~~y~~a~~ 133 (1074)
++++|+.+|.+++. ++..+|++++|.+..+ +.++. .+...+|..|.++|++++|+++|.
T Consensus 32 ~~~~A~~~~~~a~~------~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~---- 101 (292)
T 1qqe_A 32 KFEEAADLCVQAAT------IYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLE---- 101 (292)
T ss_dssp HHHHHHHHHHHHHH------HHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH----
T ss_pred cHHHHHHHHHHHHH------HHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH----
Confidence 36666666655532 3445555555544433 22332 345689999999999999999875
Q ss_pred hHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHcc--CChhHHHHHHHHh
Q psy14927 134 CGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLET--IEPDKAVLLYHKA 184 (1074)
Q Consensus 134 ~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~--~~~~~A~~ly~ka 184 (1074)
.|+++....|....... .+..+|..++. +++++|+.+|.+|
T Consensus 102 --~Al~l~~~~g~~~~~a~--------~~~~lg~~~~~~lg~~~~A~~~~~~A 144 (292)
T 1qqe_A 102 --NAIQIFTHRGQFRRGAN--------FKFELGEILENDLHDYAKAIDCYELA 144 (292)
T ss_dssp --HHHHHHHHTTCHHHHHH--------HHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred --HHHHHHHHcCCHHHHHH--------HHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 56777666654332221 22345555554 5577777766543
No 188
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.06 E-value=0.00014 Score=85.10 Aligned_cols=319 Identities=14% Similarity=0.046 Sum_probs=139.4
Q ss_pred hcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhh------
Q psy14927 8 KNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLS------ 81 (1074)
Q Consensus 8 ~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~------ 81 (1074)
..|++++|++.|+++-... +-.... -..+.....+..+|..+...|++++|..+|.++-....
T Consensus 63 ~~G~~~eAl~~~~kAl~~~----~~~~~~-------~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~ 131 (472)
T 4g1t_A 63 LKGQNEAALECLRKAEELI----QQEHAD-------QAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPY 131 (472)
T ss_dssp HTTCHHHHHHHHHHHHHHH----HHHSGG-------GCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred HCCCHHHHHHHHHHHHHHH----HhcCcc-------ccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccccc
Confidence 4688888888888875211 000000 00112233566678888889999999999888754311
Q ss_pred ---hhhH---------hhccCCHHHHHHHHH-----hcCChHHHHHHHHH---HHhcCChHHHHHHHHHhCChHHHHHHH
Q psy14927 82 ---MVRV---------LCFLQDFSRAAELAN-----ASGDTAAAYHLARQ---YENSGQFDEAIHFYSVAGSCGNAVRLC 141 (1074)
Q Consensus 82 ---~vr~---------l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~---~~~~g~~~~Ai~~y~~a~~~~~A~~la 141 (1074)
...+ .+..+++++|.+..+ ++.+..+...++.. +...|+.++|++.|.++ +++-
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~a------l~l~ 205 (472)
T 4g1t_A 132 RIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQA------IRLN 205 (472)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHH------HHHC
T ss_pred chhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHH------hhcC
Confidence 1112 222356778877654 35666666666654 34567778888877653 2110
Q ss_pred HHhCchHHHHHHh----hhc-CchhHHHHHHHHcc------CC---hhHHHHHHHHhCChHHHHHHHHhhcc--CCcc--
Q psy14927 142 KEQALDDQLWNLA----LSA-GPSEQIEAATYLET------IE---PDKAVLLYHKAGALHKALDLAFKLTL--SNSG-- 203 (1074)
Q Consensus 142 ~~~~~~~~~~~l~----~~~-~~~~~~~~A~~~e~------~~---~~~A~~ly~kaG~~~kAl~l~~~~~~--~~~~-- 203 (1074)
. +....+..++ ... ....+..+-.+|+. .. +...+.+|.+.|++.+|+..+.+.-. +++.
T Consensus 206 p--~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 283 (472)
T 4g1t_A 206 P--DNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYL 283 (472)
T ss_dssp S--SCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred C--cchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHH
Confidence 0 0000011111 000 00111112222221 11 23345566666666666666655321 1111
Q ss_pred -----hHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcC--CCCCChhHHHHHHHHHHccCCHHHHHHHHH
Q psy14927 204 -----LVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSS--DWKSQPELLKSIISFYSKGKAPHLLANFYV 276 (1074)
Q Consensus 204 -----~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~--~~~~~~~~~~~i~~~Y~k~~~~~~aa~~~~ 276 (1074)
.+|.-+....... .. .......+....+..|..+++.. .....+.....+...|...+.|++|..+|.
T Consensus 284 ~~~lg~~y~~~~~~~~~~-~~----~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~ 358 (472)
T 4g1t_A 284 HCQIGCCYRAKVFQVMNL-RE----NGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQ 358 (472)
T ss_dssp HHHHHHHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhH-HH----HHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHH
Confidence 1111111111100 00 00011112223344555555431 122334555677788888888888887776
Q ss_pred HHHhH-----------------HHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHH--------HHHHH---------HHH
Q psy14927 277 SCAQV-----------------EIDEFGNYEKGLGALNEAKRCLLKHNDSMYETL--------KSSVV---------EKL 322 (1074)
Q Consensus 277 ~~a~~-----------------ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~--------~~~~~---------~~~ 322 (1074)
.+-.. -...-|+|++|...+.+|++.-.+.. ....+ ++.+. ..+
T Consensus 359 kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~--~~~~~~~~l~~~~~~~l~~~p~~~~~~~~L 436 (472)
T 4g1t_A 359 KEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSR--EKEKMKDKLQKIAKMRLSKNGADSEALHVL 436 (472)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCH--HHHHHHHHHHHHHHHHHHHCC-CTTHHHHH
T ss_pred HHHhcCCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccH--HHHHHHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 54211 11234778888888777765321110 00000 00010 123
Q ss_pred HHHHHhhcCChHHHhhHHHHHHHHHhhccCc
Q psy14927 323 AEVEIDEFGNYEKGLGALNEAKRCLLKHNDS 353 (1074)
Q Consensus 323 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 353 (1074)
..+|.. .|+++.|+..|.++-+.-...|.+
T Consensus 437 G~~~~~-~g~~~~A~~~y~kALe~~~~~p~a 466 (472)
T 4g1t_A 437 AFLQEL-NEKMQQADEDSERGLESGSLIPSA 466 (472)
T ss_dssp HHHHHH-HHHCC-------------------
T ss_pred HHHHHH-cCCHHHHHHHHHHHHhcCCCCCcH
Confidence 445555 699999999999998877777764
No 189
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.05 E-value=0.0001 Score=78.90 Aligned_cols=232 Identities=11% Similarity=-0.023 Sum_probs=128.5
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhhC--------hhhhhhHhhccCCHHHHHHHHHh----cCCh----HHHHHHHH
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEARD--------YLSMVRVLCFLQDFSRAAELANA----SGDT----AAAYHLAR 113 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~d--------~~~~vr~l~~~~~~~~a~~i~~~----~~~~----~~~~~la~ 113 (1074)
+..+..+|..+...|++++|.++|.++-+ +..+..++..+|++++|.+..+. +.+. .+...+|.
T Consensus 3 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~ 82 (272)
T 3u4t_A 3 DDVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGK 82 (272)
T ss_dssp --CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHH
Confidence 56778899999999999999999998633 23455668889999999887763 1222 23678899
Q ss_pred HHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHccCChhHHHHHHHHhCChHHHHHH
Q psy14927 114 QYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLETIEPDKAVLLYHKAGALHKALDL 193 (1074)
Q Consensus 114 ~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~~~~~~A~~ly~kaG~~~kAl~l 193 (1074)
.|...|++++|+++|.++-. + .+. ....+.. -+.+|.+.|++.+|++.
T Consensus 83 ~~~~~~~~~~A~~~~~~a~~------~-------------~~~-~~~~~~~------------l~~~~~~~~~~~~A~~~ 130 (272)
T 3u4t_A 83 ILMKKGQDSLAIQQYQAAVD------R-------------DTT-RLDMYGQ------------IGSYFYNKGNFPLAIQY 130 (272)
T ss_dssp HHHHTTCHHHHHHHHHHHHH------H-------------STT-CTHHHHH------------HHHHHHHTTCHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHh------c-------------Ccc-cHHHHHH------------HHHHHHHccCHHHHHHH
Confidence 99999999999988765422 1 011 1122222 33445555555555555
Q ss_pred HHhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHH-HHHhcCCCCCChhHHHHHHHHHHccCCHHH-H
Q psy14927 194 AFKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAA-NYLQSSDWKSQPELLKSIISFYSKGKAPHL-L 271 (1074)
Q Consensus 194 ~~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa-~yl~~~~~~~~~~~~~~i~~~Y~k~~~~~~-a 271 (1074)
+.+.-..+ -.....+...+ ..+... .+..+..+|.++-.... -
T Consensus 131 ~~~al~~~----------------------------~~~~~~~~~l~~~~~~~~-------~~~~A~~~~~~a~~~~p~~ 175 (272)
T 3u4t_A 131 MEKQIRPT----------------------------TTDPKVFYELGQAYYYNK-------EYVKADSSFVKVLELKPNI 175 (272)
T ss_dssp HGGGCCSS----------------------------CCCHHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHHSTTC
T ss_pred HHHHhhcC----------------------------CCcHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHhCccc
Confidence 54421100 01112222222 111111 11112222211110000 0
Q ss_pred HHHHHHHHhHHHHhhcC---HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhhcCChHHHhhHHHHHHHHHh
Q psy14927 272 ANFYVSCAQVEIDEFGN---YEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEIDEFGNYEKGLGALNEAKRCLL 348 (1074)
Q Consensus 272 a~~~~~~a~~ei~e~~~---y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 348 (1074)
...+...+... ...|+ |+.|...+.++++...+.+... ..........+..+|.. .|+++.|+..|.++-..
T Consensus 176 ~~~~~~~~~~~-~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~-~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~-- 250 (272)
T 3u4t_A 176 YIGYLWRARAN-AAQDPDTKQGLAKPYYEKLIEVCAPGGAKY-KDELIEANEYIAYYYTI-NRDKVKADAAWKNILAL-- 250 (272)
T ss_dssp HHHHHHHHHHH-HHHSTTCSSCTTHHHHHHHHHHHGGGGGGG-HHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH--
T ss_pred hHHHHHHHHHH-HHcCcchhhHHHHHHHHHHHHHHhcccccc-hHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhc--
Confidence 12222233333 33355 8889999999998887655432 22222222345677777 79999999999887654
Q ss_pred hccCcc
Q psy14927 349 KHNDSM 354 (1074)
Q Consensus 349 ~~~~~~ 354 (1074)
.|++.
T Consensus 251 -~p~~~ 255 (272)
T 3u4t_A 251 -DPTNK 255 (272)
T ss_dssp -CTTCH
T ss_pred -CccHH
Confidence 56543
No 190
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.03 E-value=0.00011 Score=80.64 Aligned_cols=80 Identities=14% Similarity=-0.073 Sum_probs=57.9
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHhhC--------hhhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhc
Q psy14927 52 LLKWWAQYIESTEDMDLAMKYYEEARD--------YLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENS 118 (1074)
Q Consensus 52 l~~~~a~~~e~~~~~~~A~~~y~~a~d--------~~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~ 118 (1074)
.+...|..+...|++++|.++|.++-. +..+..++...|++++|.+..+ .+.+..+...+|..|...
T Consensus 23 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~ 102 (327)
T 3cv0_A 23 NPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 102 (327)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHc
Confidence 345567777777888888887777532 2334555777788877777655 245677888999999999
Q ss_pred CChHHHHHHHHHh
Q psy14927 119 GQFDEAIHFYSVA 131 (1074)
Q Consensus 119 g~~~~Ai~~y~~a 131 (1074)
|++++|+++|.++
T Consensus 103 ~~~~~A~~~~~~~ 115 (327)
T 3cv0_A 103 HNANAALASLRAW 115 (327)
T ss_dssp TCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 9999999988664
No 191
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.03 E-value=3.1e-06 Score=98.23 Aligned_cols=101 Identities=15% Similarity=0.138 Sum_probs=68.7
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhcccccccc---------------chhhhhh----hhh-----------
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL---------------NLETMMG----TKS----------- 838 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~---------------~~~~~~~----~~~----------- 838 (1074)
+.+|+|||||++|+.+|+.|++ +++|+.+..++.+ ....+.. ...
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 3459999999999999999998 7888877654321 0000000 000
Q ss_pred ----------------------HHHhhhhhhHHHHhhhCCeEEEee-eEEEec--CCeEEEEeCCCCeeEEEcCeEEEcc
Q psy14927 839 ----------------------AAVKALTGGIAHLFKSNKVTQLNG-HGKITG--PNTVTVIKSDGSTEEVKTKNILIAT 893 (1074)
Q Consensus 839 ----------------------~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id--~~~~~v~~~~G~~~~i~~d~lIIAT 893 (1074)
.....+...+.+.+.+.||+++.+ +|+.+. .+.+.|.+.+| ++.+|+||+||
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g---~i~ad~VIlAt 183 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG---TVDAASLVVAS 183 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE---EEEESEEEECC
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc---EEEeeEEEECC
Confidence 001234445666777789999998 576663 45677777776 79999999999
Q ss_pred CCCC
Q psy14927 894 GSEV 897 (1074)
Q Consensus 894 G~~p 897 (1074)
|+.+
T Consensus 184 G~~S 187 (417)
T 3v76_A 184 GGKS 187 (417)
T ss_dssp CCSS
T ss_pred CCcc
Confidence 9986
No 192
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.01 E-value=0.0002 Score=77.15 Aligned_cols=126 Identities=21% Similarity=0.271 Sum_probs=89.6
Q ss_pred hhhcCCHHHHHHHHHHcCcccchh-----hhHhh------hcHHHHHHHhhc---CCChHHHHHHHHHHHh----ccCHH
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHV-----PRMLL------ENTDKLEKYIIQ---SKDPVLLKWWAQYIES----TEDMD 67 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~-----~~~~~------~~~~~~~~~~~~---~~~~~l~~~~a~~~e~----~~~~~ 67 (1074)
+...|++++|+.+|+++-...... ..++. +++.++..+..+ ..++..+..+|..+.. .++++
T Consensus 16 ~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~ 95 (273)
T 1ouv_A 16 SYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTN 95 (273)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHH
T ss_pred HHhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhCCCCcccCHH
Confidence 456789999999999887543221 22222 245555555554 3578888888888888 89999
Q ss_pred HHHHHHHHhhCh------hhhhhHhhc----cCCHHHHHHHHH---hcCChHHHHHHHHHHHh----cCChHHHHHHHHH
Q psy14927 68 LAMKYYEEARDY------LSMVRVLCF----LQDFSRAAELAN---ASGDTAAAYHLARQYEN----SGQFDEAIHFYSV 130 (1074)
Q Consensus 68 ~A~~~y~~a~d~------~~~vr~l~~----~~~~~~a~~i~~---~~~~~~~~~~la~~~~~----~g~~~~Ai~~y~~ 130 (1074)
+|.++|.++-+. ..+..+|.. .+++++|.+..+ +.++..+.+.+|..|.. .+++++|+++|.+
T Consensus 96 ~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~ 175 (273)
T 1ouv_A 96 KALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDK 175 (273)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 999888886432 233344666 888888888766 45677788888888888 8888888888876
Q ss_pred h
Q psy14927 131 A 131 (1074)
Q Consensus 131 a 131 (1074)
+
T Consensus 176 a 176 (273)
T 1ouv_A 176 A 176 (273)
T ss_dssp H
T ss_pred H
Confidence 5
No 193
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.01 E-value=0.00018 Score=77.61 Aligned_cols=84 Identities=23% Similarity=0.281 Sum_probs=58.4
Q ss_pred CChHHHHHHHHHHHhccCHHHHHHHHHHhhCh------hhhhhHhhc----cCCHHHHHHHHH---hcCChHHHHHHHHH
Q psy14927 48 KDPVLLKWWAQYIESTEDMDLAMKYYEEARDY------LSMVRVLCF----LQDFSRAAELAN---ASGDTAAAYHLARQ 114 (1074)
Q Consensus 48 ~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~------~~~vr~l~~----~~~~~~a~~i~~---~~~~~~~~~~la~~ 114 (1074)
.++..+..+|..+...|++++|.++|.++-+. ..+..++.. .+++++|.+..+ +.++..+.+.+|..
T Consensus 4 ~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~ 83 (273)
T 1ouv_A 4 QDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNL 83 (273)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 45667777777777888888888888775331 233444666 777777777665 34567777788888
Q ss_pred HHh----cCChHHHHHHHHHh
Q psy14927 115 YEN----SGQFDEAIHFYSVA 131 (1074)
Q Consensus 115 ~~~----~g~~~~Ai~~y~~a 131 (1074)
|.. .|++++|+++|.++
T Consensus 84 ~~~g~~~~~~~~~A~~~~~~a 104 (273)
T 1ouv_A 84 YYSGQGVSQNTNKALQYYSKA 104 (273)
T ss_dssp HHHTSSSCCCHHHHHHHHHHH
T ss_pred HhCCCCcccCHHHHHHHHHHH
Confidence 888 88888888877664
No 194
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.99 E-value=0.00028 Score=80.31 Aligned_cols=226 Identities=14% Similarity=0.107 Sum_probs=132.9
Q ss_pred hhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh-------
Q psy14927 7 MKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY------- 79 (1074)
Q Consensus 7 ~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~------- 79 (1074)
-..|++++|+..|+++......++.- . .....+.+.|..+...|+++.|.++|.+|-+.
T Consensus 112 ~~~g~~~~A~~~~~~al~~~~~~~~~----~----------~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~ 177 (378)
T 3q15_A 112 FDQKEYVEAIGYYREAEKELPFVSDD----I----------EKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLY 177 (378)
T ss_dssp HHTTCHHHHHHHHHHHHTTGGGCCCH----H----------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTC
T ss_pred HHHCCHHHHHHHHHHHHHHHhhCCCh----H----------HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCc
Confidence 35688888888888876443222110 0 01346677788888888888888888876432
Q ss_pred h--------hhhhHhhccCCHHHHHHHHHh-------cCCh----HHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHH
Q psy14927 80 L--------SMVRVLCFLQDFSRAAELANA-------SGDT----AAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRL 140 (1074)
Q Consensus 80 ~--------~~vr~l~~~~~~~~a~~i~~~-------~~~~----~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~l 140 (1074)
. .+..++..+|++++|.+..++ .++. .+...+|..|..+|++++|+++|. +|+++
T Consensus 178 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~------~al~~ 251 (378)
T 3q15_A 178 SIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQ------KAAKV 251 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH------HHHHH
T ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH------HHHHH
Confidence 1 344456778888888776542 2332 346689999999999999999875 45666
Q ss_pred HHHhCchHHHHHHhhhcCchhHHHHHHHHcc-CChhHHHHHHHHhCChHHHHHHHHhhccCCcchHHHHHHHHHH-hcCC
Q psy14927 141 CKEQALDDQLWNLALSAGPSEQIEAATYLET-IEPDKAVLLYHKAGALHKALDLAFKLTLSNSGLVFQIKAMKCL-LKSG 218 (1074)
Q Consensus 141 a~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~-~~~~~A~~ly~kaG~~~kAl~l~~~~~~~~~~~~~~~~a~k~l-~~~~ 218 (1074)
++..+.... ...+...|..+.. +++++|..+|.+ |++++.+.+ +..+...+..+..+ ...+
T Consensus 252 ~~~~~~~~~---------~~~~~~la~~~~~~g~~~~A~~~~~~------al~~~~~~~--~~~~~~~~~~l~~ly~~~~ 314 (378)
T 3q15_A 252 SREKVPDLL---------PKVLFGLSWTLCKAGQTQKAFQFIEE------GLDHITARS--HKFYKELFLFLQAVYKETV 314 (378)
T ss_dssp HHHHCGGGH---------HHHHHHHHHHHHHTTCHHHHHHHHHH------HHHHCCTTC--CSCHHHHHHHHHHHHSSSC
T ss_pred HHhhCChhH---------HHHHHHHHHHHHHCCCHHHHHHHHHH------HHHHHHHcC--CHHHHHHHHHHHHHHhCCC
Confidence 666532221 1222234443333 555666555543 233222211 11111111111112 1122
Q ss_pred ChhhHHHhhhhcchHHHHHHHHHHHhcC-CCCCChhHHHHHHHHHHccCCHHHHHHHHHHHHhHH
Q psy14927 219 DTNKIIFFAGVSRMKEIYVMAANYLQSS-DWKSQPELLKSIISFYSKGKAPHLLANFYVSCAQVE 282 (1074)
Q Consensus 219 ~~~~~i~~a~~~r~~~l~~~aa~yl~~~-~~~~~~~~~~~i~~~Y~k~~~~~~aa~~~~~~a~~e 282 (1074)
+ .+.+..|..|++.. .+...+.....+..+|.+.|.+++|..+|..+-...
T Consensus 315 ~-------------~~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~ 366 (378)
T 3q15_A 315 D-------------ERKIHDLLSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQ 366 (378)
T ss_dssp C-------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred c-------------HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 2 25567777777764 222233455668999999999999999988885443
No 195
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.97 E-value=0.00064 Score=73.88 Aligned_cols=188 Identities=13% Similarity=0.075 Sum_probs=100.8
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHH
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYS 129 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~ 129 (1074)
...+..+|..+...|++++|.++|.++-.. ....+.. .......+...+|..|...|++++|+++|.
T Consensus 27 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~------~~~~~~~-------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 93 (311)
T 3nf1_A 27 LRTLHNLVIQYASQGRYEVAVPLCKQALED------LEKTSGH-------DHPDVATMLNILALVYRDQNKYKDAANLLN 93 (311)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------HHHHHCS-------SSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH------HHHHcCC-------CCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 456777899999999999999999776443 1111100 011123456789999999999999999875
Q ss_pred HhCChHHHHHHHHHh--CchHHHHHHhhhcCchhHHHHHHHHcc-CChhHHHHHHHHhCChHHHHHHHHhhccCCcc--h
Q psy14927 130 VAGSCGNAVRLCKEQ--ALDDQLWNLALSAGPSEQIEAATYLET-IEPDKAVLLYHKAGALHKALDLAFKLTLSNSG--L 204 (1074)
Q Consensus 130 ~a~~~~~A~~la~~~--~~~~~~~~l~~~~~~~~~~~~A~~~e~-~~~~~A~~ly~kaG~~~kAl~l~~~~~~~~~~--~ 204 (1074)
+|++++++. +.... ....+...|..+.. +++++|..+|.++ ++++.+....+.. .
T Consensus 94 ------~al~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~g~~~~A~~~~~~a------~~~~~~~~~~~~~~~~ 153 (311)
T 3nf1_A 94 ------DALAIREKTLGKDHPA--------VAATLNNLAVLYGKRGKYKEAEPLCKRA------LEIREKVLGKDHPDVA 153 (311)
T ss_dssp ------HHHHHHHHHHCTTCHH--------HHHHHHHHHHHHHTTTCHHHHHHHHHHH------HHHHHHHHCTTCHHHH
T ss_pred ------HHHHHHHHHhCCCChH--------HHHHHHHHHHHHHHcCcHHHHHHHHHHH------HHHHHHhcCCCChHHH
Confidence 456665544 11000 01223345555544 6777777777654 3333221000000 0
Q ss_pred HHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcCCCCCCh---hHHHHHHHHHHccCCHHHHHHHHHHHH
Q psy14927 205 VFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSSDWKSQP---ELLKSIISFYSKGKAPHLLANFYVSCA 279 (1074)
Q Consensus 205 ~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~~~~~~~---~~~~~i~~~Y~k~~~~~~aa~~~~~~a 279 (1074)
..+..-..++.+.|+.++++.+.. .+.+.........+| .....+..+|...|++++|..++..+-
T Consensus 154 ~~~~~la~~~~~~~~~~~A~~~~~---------~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 222 (311)
T 3nf1_A 154 KQLNNLALLCQNQGKYEEVEYYYQ---------RALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEIL 222 (311)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHH---------HHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHH---------HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 011222344566777766655433 333333332112222 223344566666666666665555553
No 196
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.96 E-value=1.4e-05 Score=97.03 Aligned_cols=45 Identities=22% Similarity=0.345 Sum_probs=34.2
Q ss_pred CCCeeeCCCCCCCCCCEEEecccCC-C--------CCcHHHHHHHHHHHHHHhh
Q psy14927 1027 KGRVPVNSRFQTVIPNIFAIGDCIH-G--------PMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1027 ~G~I~Vd~~~~ts~~~IyAiGD~~~-~--------~~~~~~A~~~G~~aA~~I~ 1071 (1074)
-|.|.||.+.+|++||+||+|+|+. + ......++-.|++|+.+++
T Consensus 359 ~GGi~vd~~~~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa 412 (602)
T 1kf6_A 359 MGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQAT 412 (602)
T ss_dssp CCEEECCTTSBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEECCCCccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 4779999999999999999999863 1 1123456666888888765
No 197
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.95 E-value=7.5e-06 Score=87.05 Aligned_cols=100 Identities=18% Similarity=0.180 Sum_probs=65.7
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhccccccccchh---------hhhhhhh----HHHhhhhhhHHHHhhhC-C
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLE---------TMMGTKS----AAVKALTGGIAHLFKSN-K 856 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~---------~~~~~~~----~~~~~l~~~~~~~l~~~-g 856 (1074)
+|+||||||+|+++|..|++ +++|+.....+ +... .+..... .....+...+.+.+.+. |
T Consensus 5 dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G-~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 5 QVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM-MPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT-CCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC-cccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 49999999999999999998 67777532222 1100 0000000 00124445567777776 9
Q ss_pred eEEEeeeEEEecC--CeE-EEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 857 VTQLNGHGKITGP--NTV-TVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 857 V~~~~g~v~~id~--~~~-~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
|+++..+|+.+.. +.+ .|.+.+| .++.+|.||+|||..+.
T Consensus 84 v~i~~~~v~~i~~~~~~v~~v~~~~g--~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 84 LHLFQATATGLLLEGNRVVGVRTWEG--PPARGEKVVLAVGSFLG 126 (232)
T ss_dssp EEEEECCEEEEEEETTEEEEEEETTS--CCEECSEEEECCTTCSS
T ss_pred cEEEEeEEEEEEEeCCEEEEEEECCC--CEEECCEEEECCCCChh
Confidence 9999777777643 332 4667777 57999999999999763
No 198
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=97.95 E-value=0.00041 Score=73.12 Aligned_cols=84 Identities=13% Similarity=0.139 Sum_probs=59.7
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhhC-------hhhhhhHhhccCCHHHHHHHHHh-----cCC-------hHHHHH
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEARD-------YLSMVRVLCFLQDFSRAAELANA-----SGD-------TAAAYH 110 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~d-------~~~~vr~l~~~~~~~~a~~i~~~-----~~~-------~~~~~~ 110 (1074)
...+...|..+...|++++|.++|.++-+ +..+..++..+|++++|.+..+. +.+ ......
T Consensus 5 a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~ 84 (258)
T 3uq3_A 5 ADKEKAEGNKFYKARQFDEAIEHYNKAWELHKDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFAR 84 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhhccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHH
Confidence 34566667777777888888877777532 23445557777777777776552 122 467779
Q ss_pred HHHHHHhcCChHHHHHHHHHhCC
Q psy14927 111 LARQYENSGQFDEAIHFYSVAGS 133 (1074)
Q Consensus 111 la~~~~~~g~~~~Ai~~y~~a~~ 133 (1074)
+|..|...|++++|+++|.++-.
T Consensus 85 l~~~~~~~~~~~~A~~~~~~a~~ 107 (258)
T 3uq3_A 85 IGNAYHKLGDLKKTIEYYQKSLT 107 (258)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHh
Confidence 99999999999999999877654
No 199
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.94 E-value=0.00016 Score=77.28 Aligned_cols=110 Identities=13% Similarity=-0.024 Sum_probs=82.4
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhC-------
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARD------- 78 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d------- 78 (1074)
+...|++++|+..|+++-..... ..+.++..+...|..+...|++++|.++|.++-.
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 78 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILASRAL----------------TDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPE 78 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSCC----------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHH
T ss_pred cCccchHHHHHHHHHHHHhcccc----------------cCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHH
Confidence 45668899999999988743200 0011256777888888889999999999888533
Q ss_pred -hhhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 79 -YLSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 79 -~~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
+..+..++...|++++|.+..++ +.+..+...+|..|...|++++|+++|.++
T Consensus 79 ~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 137 (275)
T 1xnf_A 79 VFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAF 137 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 23456668888999888887662 457788889999999999999999988765
No 200
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.91 E-value=0.00011 Score=80.07 Aligned_cols=121 Identities=13% Similarity=0.155 Sum_probs=79.6
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh------
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY------ 79 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~------ 79 (1074)
+...|++++|+.+|+++-... +-..+. ........+..+|..+...|++++|.++|.++-..
T Consensus 37 ~~~~g~~~~A~~~~~~a~~~~----~~~~~~--------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 104 (311)
T 3nf1_A 37 YASQGRYEVAVPLCKQALEDL----EKTSGH--------DHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLG 104 (311)
T ss_dssp HHHTTCHHHHHHHHHHHHHHH----HHHHCS--------SSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHcCCHHHHHHHHHHHHHHH----HHHcCC--------CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 456788888888888876321 000000 01112456777788888999999999988886433
Q ss_pred ----------hhhhhHhhccCCHHHHHHHHHhc---------C----ChHHHHHHHHHHHhcCChHHHHHHHHHhCChHH
Q psy14927 80 ----------LSMVRVLCFLQDFSRAAELANAS---------G----DTAAAYHLARQYENSGQFDEAIHFYSVAGSCGN 136 (1074)
Q Consensus 80 ----------~~~vr~l~~~~~~~~a~~i~~~~---------~----~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~ 136 (1074)
..+..++...|++++|.+..++. + ...+...+|..|...|++++|+++|.+
T Consensus 105 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~------ 178 (311)
T 3nf1_A 105 KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQR------ 178 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHH------
T ss_pred CCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHH------
Confidence 23445577788888888776531 1 223466889999999999999998754
Q ss_pred HHHHHHHh
Q psy14927 137 AVRLCKEQ 144 (1074)
Q Consensus 137 A~~la~~~ 144 (1074)
|++++++.
T Consensus 179 a~~~~~~~ 186 (311)
T 3nf1_A 179 ALEIYQTK 186 (311)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 45555443
No 201
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.90 E-value=0.00013 Score=77.29 Aligned_cols=20 Identities=10% Similarity=0.047 Sum_probs=12.6
Q ss_pred HHHHHHHhCChHHHHHHHHh
Q psy14927 177 AVLLYHKAGALHKALDLAFK 196 (1074)
Q Consensus 177 A~~ly~kaG~~~kAl~l~~~ 196 (1074)
.+.+|.+.|++.+|++++.+
T Consensus 215 ~~~~~~~~g~~~~A~~~~~~ 234 (252)
T 2ho1_A 215 GIRLAKVFEDRDTAASYGLQ 234 (252)
T ss_dssp HHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHH
Confidence 44556666777777666555
No 202
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.89 E-value=0.00044 Score=75.95 Aligned_cols=129 Identities=13% Similarity=0.109 Sum_probs=100.6
Q ss_pred hhhcCCHHHHHHHHHHcCcccchh--------hhHhh--hcHHHHHHHhhcCCChH--HHHHHHHHHHhccCHHHHHHHH
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHV--------PRMLL--ENTDKLEKYIIQSKDPV--LLKWWAQYIESTEDMDLAMKYY 73 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~--------~~~~~--~~~~~~~~~~~~~~~~~--l~~~~a~~~e~~~~~~~A~~~y 73 (1074)
.-..|++++|+...++......+. .|.|+ ++++.+..-+...++|. .+..+++++...+++++|.+.|
T Consensus 9 ~~~~g~y~~ai~~~~~~~~~~p~~~~e~~~~l~r~yi~~g~~~~al~~~~~~~~~~~~a~~~la~~~~~~~~~~~A~~~l 88 (291)
T 3mkr_A 9 AFYIGSYQQCINEAQRVKPSSPERDVERDVFLYRAYLAQRKYGVVLDEIKPSSAPELQAVRMFAEYLASHSRRDAIVAEL 88 (291)
T ss_dssp HHHTTCHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCHHHHHHHSCTTSCHHHHHHHHHHHHHHCSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHCCCHHHHHHHhcccCChhHHHHHHHHHHHcCCCcHHHHHHHH
Confidence 345799999999999876554222 45554 47777777776665554 4567799999999999999999
Q ss_pred HHh--hC-----h---hhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHHhCCh
Q psy14927 74 EEA--RD-----Y---LSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSC 134 (1074)
Q Consensus 74 ~~a--~d-----~---~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~ 134 (1074)
.+. .+ . ..+..+|...|++++|.+..+.+.+..+...+|+.|.++|++++|++.|.++-.+
T Consensus 89 ~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~ 159 (291)
T 3mkr_A 89 DREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQGDSLECMAMTVQILLKLDRLDLARKELKKMQDQ 159 (291)
T ss_dssp HHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTTCCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhh
Confidence 873 21 1 2334558899999999999999888899999999999999999999999886543
No 203
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.88 E-value=0.00052 Score=75.20 Aligned_cols=189 Identities=13% Similarity=0.125 Sum_probs=98.1
Q ss_pred HHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHccCChhHHHHHHHHhCChHHH
Q psy14927 111 LARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLETIEPDKAVLLYHKAGALHKA 190 (1074)
Q Consensus 111 la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~~~~~~A~~ly~kaG~~~kA 190 (1074)
.+..|..+|++++|+++|.+ |+++..+.+...... ..+ ...+.+|.+.|++.+|
T Consensus 43 a~~~~~~~g~~~~A~~~~~~------al~~~~~~~~~~~~a--------~~~------------~~lg~~~~~~g~~~~A 96 (292)
T 1qqe_A 43 AATIYRLRKELNLAGDSFLK------AADYQKKAGNEDEAG--------NTY------------VEAYKCFKSGGNSVNA 96 (292)
T ss_dssp HHHHHHHTTCTHHHHHHHHH------HHHHHHHTTCHHHHH--------HHH------------HHHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHH------HHHHHHHhCCHHHHH--------HHH------------HHHHHHHHHCCCHHHH
Confidence 36677888888888887664 455555443221111 111 2344455555555555
Q ss_pred HHHHHhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhc-C-CCCCChhHHHHHHHHHHccCCH
Q psy14927 191 LDLAFKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQS-S-DWKSQPELLKSIISFYSKGKAP 268 (1074)
Q Consensus 191 l~l~~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~-~-~~~~~~~~~~~i~~~Y~k~~~~ 268 (1074)
+..+.+ |.+...+.|+...+ ...+..++..+.. + +++.--..++++++.+...+..
T Consensus 97 ~~~~~~-------------Al~l~~~~g~~~~~---------a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~ 154 (292)
T 1qqe_A 97 VDSLEN-------------AIQIFTHRGQFRRG---------ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV 154 (292)
T ss_dssp HHHHHH-------------HHHHHHHTTCHHHH---------HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHH-------------HHHHHHHcCCHHHH---------HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh
Confidence 555444 22322234443221 2234444444443 2 1111113333344444444444
Q ss_pred HHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhhcCChHHHhhHHHHHHHHHh
Q psy14927 269 HLLANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEIDEFGNYEKGLGALNEAKRCLL 348 (1074)
Q Consensus 269 ~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 348 (1074)
..++..+..++..- ..-|+|++|...+..+++.....+..... .......+..++.. .|+++.|+..|.++-..-.
T Consensus 155 ~~~~~~~~~lg~~~-~~~g~~~~A~~~~~~al~~~~~~~~~~~~--~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~l~p 230 (292)
T 1qqe_A 155 ALSNKCFIKCADLK-ALDGQYIEASDIYSKLIKSSMGNRLSQWS--LKDYFLKKGLCQLA-ATDAVAAARTLQEGQSEDP 230 (292)
T ss_dssp HHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHTTSSCTTTGGG--HHHHHHHHHHHHHH-TTCHHHHHHHHHGGGCC--
T ss_pred HHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHhcCCcccHH--HHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCC
Confidence 44566777777777 77899999999998888765443322111 01112233455667 7999999998888765433
Q ss_pred hcc
Q psy14927 349 KHN 351 (1074)
Q Consensus 349 ~~~ 351 (1074)
.|+
T Consensus 231 ~~~ 233 (292)
T 1qqe_A 231 NFA 233 (292)
T ss_dssp ---
T ss_pred CCC
Confidence 444
No 204
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.87 E-value=0.0006 Score=76.64 Aligned_cols=126 Identities=17% Similarity=0.110 Sum_probs=70.0
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHh---------hhcHHHHHHHhhc-----CCChHHHHHHHHHHHhccCHHHHH
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRML---------LENTDKLEKYIIQ-----SKDPVLLKWWAQYIESTEDMDLAM 70 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~---------~~~~~~~~~~~~~-----~~~~~l~~~~a~~~e~~~~~~~A~ 70 (1074)
.+...|++++|+.+|+++-..+..-+..+ .+++.++..+..+ ++++..+..+|..+...|++++|.
T Consensus 74 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 153 (365)
T 4eqf_A 74 KRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDAC 153 (365)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHH
Confidence 46788999999999999865432222111 1345444444433 345566666666666666666666
Q ss_pred HHHHHhhChh------------------hhhhHhhccCCHHHHHHHHHh-----cC--ChHHHHHHHHHHHhcCChHHHH
Q psy14927 71 KYYEEARDYL------------------SMVRVLCFLQDFSRAAELANA-----SG--DTAAAYHLARQYENSGQFDEAI 125 (1074)
Q Consensus 71 ~~y~~a~d~~------------------~~vr~l~~~~~~~~a~~i~~~-----~~--~~~~~~~la~~~~~~g~~~~Ai 125 (1074)
++|.++-... .+..++...|++++|.+..++ +. +......+|..|...|++++|+
T Consensus 154 ~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~ 233 (365)
T 4eqf_A 154 EALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAI 233 (365)
T ss_dssp HHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHH
Confidence 6666643221 124455566666666665542 22 4455556666666666666666
Q ss_pred HHHHH
Q psy14927 126 HFYSV 130 (1074)
Q Consensus 126 ~~y~~ 130 (1074)
++|.+
T Consensus 234 ~~~~~ 238 (365)
T 4eqf_A 234 DAFNA 238 (365)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 205
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.85 E-value=6.2e-06 Score=98.15 Aligned_cols=104 Identities=12% Similarity=-0.036 Sum_probs=68.2
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhh---hhhh------------------HHHhhhhhh
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMM---GTKS------------------AAVKALTGG 847 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~---~~~~------------------~~~~~l~~~ 847 (1074)
..+|+||||||+|+++|+.|++ +++|+.+..+........+ .... -....+...
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 171 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLL 171 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHH
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHH
Confidence 3459999999999999999998 7888876654321000000 0000 001334445
Q ss_pred HHHHhhhCCeEEEee-eEEEecC-----CeEEEEe--C-CCCeeEEEcCeEEEccCCCC
Q psy14927 848 IAHLFKSNKVTQLNG-HGKITGP-----NTVTVIK--S-DGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 848 ~~~~l~~~gV~~~~g-~v~~id~-----~~~~v~~--~-~G~~~~i~~d~lIIATG~~p 897 (1074)
+.+.+.+.||+++.+ +|+.+.. +.+.|++ . +|+..++.+|+||+|||+.+
T Consensus 172 L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 172 LLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 667777789999999 5776653 3455655 3 44324689999999999986
No 206
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.85 E-value=3.2e-05 Score=84.85 Aligned_cols=123 Identities=11% Similarity=0.090 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHh-CCCEEEeCceEEEEEecCCeE-EEEEeec-------c-CCCCceEEEcCEEEEccCCcccCCccCc
Q psy14927 948 GEVAKQFQRILGK-QGMQFKLGTKVTGASKSGDNI-TVTIENV-------K-DPTKKEELSCDALLVCVGRRPYTHNLGL 1017 (1074)
Q Consensus 948 ~~~~~~~~~~l~~-~gV~i~~~~~v~~i~~~~~~~-~v~~~~~-------~-~~g~~~~i~~D~vi~a~G~~p~~~~l~l 1017 (1074)
..+...+.+.+.+ .||++++++.+.++..+++.+ .+.+... + ..++..++++|.||+|+|..|+......
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~ 198 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGV 198 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHH
Confidence 3444556666655 799999999999998765543 4444310 0 0133478999999999998776542211
Q ss_pred c---ccC--cccCCCCCeeeC-------CCCCCCCCCEEEecccCC--------CCCcHHHHHHHHHHHHHHhh
Q psy14927 1018 E---EIG--IEKDEKGRVPVN-------SRFQTVIPNIFAIGDCIH--------GPMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1018 ~---~~g--l~ld~~G~I~Vd-------~~~~ts~~~IyAiGD~~~--------~~~~~~~A~~~G~~aA~~I~ 1071 (1074)
. ..+ +.+.....+.++ +..+++.|++|++||++. +| ....+..+|..+|.+|.
T Consensus 199 ~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp-~~~~~~~sG~~~a~~i~ 271 (284)
T 1rp0_A 199 KRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGP-TFGAMMISGQKAGQLAL 271 (284)
T ss_dssp HHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCS-CCHHHHHHHHHHHHHHH
T ss_pred HHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcCh-HHHHHHHhHHHHHHHHH
Confidence 1 111 111111112222 123567899999999873 23 45678899999999986
No 207
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=97.85 E-value=0.0003 Score=77.69 Aligned_cols=68 Identities=10% Similarity=0.141 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCC-----HHHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhc
Q psy14927 232 MKEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKA-----PHLLANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLLKH 306 (1074)
Q Consensus 232 ~~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~-----~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~ 306 (1074)
+.++|...++++... +.+..+..+|.++-. .+....++...++.| ...|+++.|...+..+++...+.
T Consensus 202 ~~~~~~~~~~~~~~~------g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~-~~~g~~~~a~~~~~~a~~~~p~~ 274 (308)
T 2ond_A 202 IPEYVLAYIDYLSHL------NEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFE-SNIGDLASILKVEKRRFTAFREE 274 (308)
T ss_dssp CHHHHHHHHHHHHTT------CCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHH-HHHSCHHHHHHHHHHHHHHTTTT
T ss_pred cHHHHHHHHHHHHHC------CCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHcccc
Confidence 456777778887766 334455555555433 124556677777888 88999999999998888776653
No 208
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.84 E-value=1.6e-05 Score=91.15 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=67.6
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccc---cch-h-------------hhhh-----------------
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVK---LNL-E-------------TMMG----------------- 835 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~---~~~-~-------------~~~~----------------- 835 (1074)
.+|+||||||+|+++|+.|++ +++|+.+..+.. ..+ + .+..
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 91 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKSV 91 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCcee
Confidence 359999999999999999998 788876644320 000 0 0000
Q ss_pred ---------hhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCC
Q psy14927 836 ---------TKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 836 ---------~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p 897 (1074)
...-....+...+.+.+.+.||+++.+ +|+.++.+. .|++.+| .++.+|.||+|+|..+
T Consensus 92 ~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g--~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 92 SKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTLQTG--EVLEADLIVGADGVGS 160 (379)
T ss_dssp EEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEETTS--CEEECSEEEECCCTTC
T ss_pred eeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEECCC--CEEEcCEEEECCCccH
Confidence 000000233444566677789999999 577776545 7778888 5799999999999986
No 209
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.82 E-value=0.004 Score=70.14 Aligned_cols=106 Identities=13% Similarity=0.069 Sum_probs=69.3
Q ss_pred hhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCCh----HHHHHHHHHHHhccCHHHHHHHHHHhhC----
Q psy14927 7 MKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDP----VLLKWWAQYIESTEDMDLAMKYYEEARD---- 78 (1074)
Q Consensus 7 ~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~a~~~e~~~~~~~A~~~y~~a~d---- 78 (1074)
...|++++|..+++++-... | ..++ ..+...|..+...|++++|.++|.++-.
T Consensus 25 ~~~g~~~~A~~~~~~al~~~---~----------------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 85 (373)
T 1hz4_A 25 INDGNPDEAERLAKLALEEL---P----------------PGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQ 85 (373)
T ss_dssp HHTTCHHHHHHHHHHHHHTC---C----------------TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHcC---C----------------CCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHh
Confidence 34677888888777764221 0 0111 2455667777888888888888877543
Q ss_pred ---h-------hhhhhHhhccCCHHHHHHHHHh-------cCC---h---HHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 79 ---Y-------LSMVRVLCFLQDFSRAAELANA-------SGD---T---AAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 79 ---~-------~~~vr~l~~~~~~~~a~~i~~~-------~~~---~---~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
. ..+..++...|++++|.+..++ .++ . .....+|..+...|++++|+++|.++
T Consensus 86 ~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 161 (373)
T 1hz4_A 86 HDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSG 161 (373)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 2 2345567788998888877653 122 1 23446888899999999999887543
No 210
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=97.80 E-value=9.1e-05 Score=77.40 Aligned_cols=83 Identities=14% Similarity=0.062 Sum_probs=66.8
Q ss_pred CChHHHHHHHHHHHhccCHHHHHHHHHHhhCh--------hhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHH
Q psy14927 48 KDPVLLKWWAQYIESTEDMDLAMKYYEEARDY--------LSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQ 114 (1074)
Q Consensus 48 ~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~--------~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~ 114 (1074)
.++..+..+|..+...|++++|..+|.++=.. ..+..++..+|++++|....+ .+.+..+.+.+|..
T Consensus 3 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~ 82 (217)
T 2pl2_A 3 TAEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEA 82 (217)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 45778888999999999999999999986433 356677888999999988765 45677888999999
Q ss_pred HHhc-----------CChHHHHHHHHH
Q psy14927 115 YENS-----------GQFDEAIHFYSV 130 (1074)
Q Consensus 115 ~~~~-----------g~~~~Ai~~y~~ 130 (1074)
+... |++++|++.|.+
T Consensus 83 ~~~~~~~~~~~~~~~g~~~~A~~~~~~ 109 (217)
T 2pl2_A 83 YVALYRQAEDRERGKGYLEQALSVLKD 109 (217)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhhhhhcccccCHHHHHHHHHH
Confidence 9998 888888877654
No 211
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=97.79 E-value=0.00044 Score=68.86 Aligned_cols=105 Identities=10% Similarity=0.030 Sum_probs=85.7
Q ss_pred HHHHHHhhhcHHHHHHHHHHhhCHHHHHHHHHHcCCHHHHHHHHHhcCCcHHHHHHHHHHHhcCCHHHHHHHHHHcCCHH
Q psy14927 630 WAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSCG 709 (1074)
Q Consensus 630 ~a~~~e~~~~~~~A~~~y~~ag~~~~ai~~~~~~~~~~~a~~v~~~~~~~~~~~~~A~~~~~~g~~~~A~~~~~kag~~~ 709 (1074)
.++-+++...|+.=.+..+..|+++-|.+||.+++|+.++.=+....++.+....+|+..+..|++..|..+|...|+++
T Consensus 27 ~a~~l~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~iA~~~g~~n~af~~~l~lGdv~ 106 (177)
T 3mkq_B 27 EAKKLNDSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLLNTFYNNSTK 106 (177)
T ss_dssp HHHHHCCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHH
T ss_pred HHHHhCCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHHHCccHHHHHHHHHHcCCHH
Confidence 34445566677777777777777777777777777777777666666777777788999999999999999999999999
Q ss_pred HHHHH---hccHHHHHHHHHHhCCcccH
Q psy14927 710 NAVRL---CGQLDAVESIASELNVQSDQ 734 (1074)
Q Consensus 710 ~Av~m---a~~w~~a~~~A~~~~~~~~~ 734 (1074)
++++| +++|.+|..+|+.|.+...+
T Consensus 107 ~~i~lL~~~~r~~eA~~~A~t~g~~~~a 134 (177)
T 3mkq_B 107 ERSSIFAEGGSLPLAYAVAKANGDEAAA 134 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHCCChHHHHHHHHHcCcHHHH
Confidence 99999 89999999999999775554
No 212
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.79 E-value=9.1e-05 Score=91.86 Aligned_cols=138 Identities=23% Similarity=0.213 Sum_probs=101.8
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhC-------
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARD------- 78 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d------- 78 (1074)
+.++|++++|+++|+++-..+ ++++..+..+|..+...|++++|+++|.+|=.
T Consensus 19 ~~~~G~~~eAi~~~~kAl~l~--------------------P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~ 78 (723)
T 4gyw_A 19 KREQGNIEEAVRLYRKALEVF--------------------PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFAD 78 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHC--------------------SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHcCCHHHHHHHHHHHHHhC--------------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 567899999999999886433 45577888899999999999999999988532
Q ss_pred -hhhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHH
Q psy14927 79 -YLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWN 152 (1074)
Q Consensus 79 -~~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~ 152 (1074)
+.++..+|..+|++++|.+..+ ++++..+.+.+|..|.++|++++|++.|.++ +++.
T Consensus 79 a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~A------l~l~----------- 141 (723)
T 4gyw_A 79 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTA------LKLK----------- 141 (723)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH------HHHC-----------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH------HHhC-----------
Confidence 3456667888999999987665 3567788899999999999999999987653 3221
Q ss_pred HhhhcCchhHHHHHHHHcc-CChhHHHHHHHH
Q psy14927 153 LALSAGPSEQIEAATYLET-IEPDKAVLLYHK 183 (1074)
Q Consensus 153 l~~~~~~~~~~~~A~~~e~-~~~~~A~~ly~k 183 (1074)
+ ...+.+...|..+.. +++++|...|.+
T Consensus 142 --P-~~~~a~~~L~~~l~~~g~~~~A~~~~~k 170 (723)
T 4gyw_A 142 --P-DFPDAYCNLAHCLQIVCDWTDYDERMKK 170 (723)
T ss_dssp --S-CCHHHHHHHHHHHHHTTCCTTHHHHHHH
T ss_pred --C-CChHHHhhhhhHHHhcccHHHHHHHHHH
Confidence 1 112334445555555 667777776654
No 213
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=97.79 E-value=0.0057 Score=72.91 Aligned_cols=136 Identities=9% Similarity=-0.042 Sum_probs=68.5
Q ss_pred HHHHHHHHhcCCChhhHHHhhhhcc-----h-HHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCCHHH-HHHHHHHHH
Q psy14927 207 QIKAMKCLLKSGDTNKIIFFAGVSR-----M-KEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKAPHL-LANFYVSCA 279 (1074)
Q Consensus 207 ~~~a~k~l~~~~~~~~~i~~a~~~r-----~-~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~~~~-aa~~~~~~a 279 (1074)
|..-...+.+.|+.+++..+-..+. + ..+|...++++... +.+..+...|.++-.... -...+...+
T Consensus 324 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~------~~~~~A~~~~~~Al~~~~~~~~~~~~~a 397 (530)
T 2ooe_A 324 YFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRA------EGIKSGRMIFKKAREDARTRHHVYVTAA 397 (530)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHTCTTCCTHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHh------cCHHHHHHHHHHHHhccCCchHHHHHHH
Confidence 4444455555666665544333221 1 13455555555443 333444444444322110 012233334
Q ss_pred hHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhhcCChHHHhhHHHHHHHHHhhccCcchhHH
Q psy14927 280 QVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETL 358 (1074)
Q Consensus 280 ~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~ 358 (1074)
..|....|++++|...+..+++.... .+ ++ -.....++.+ .|+++.|..+|.++-..-...|+....+.
T Consensus 398 ~~~~~~~~~~~~A~~~~e~al~~~p~----~~-~~----~~~~~~~~~~-~g~~~~Ar~~~~~al~~~~~~~~~~~~lw 466 (530)
T 2ooe_A 398 LMEYYCSKDKSVAFKIFELGLKKYGD----IP-EY----VLAYIDYLSH-LNEDNNTRVLFERVLTSGSLPPEKSGEIW 466 (530)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHTT----CH-HH----HHHHHHHHTT-TTCHHHHHHHHHHHHHSCCSCGGGCHHHH
T ss_pred HHHHHHcCChhHHHHHHHHHHHHCCC----CH-HH----HHHHHHHHHh-CCCHhhHHHHHHHHHhccCCCHHHHHHHH
Confidence 45544578888888888888775421 12 11 1222344555 59999998888887554233344344344
No 214
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.78 E-value=0.00044 Score=81.11 Aligned_cols=317 Identities=14% Similarity=0.050 Sum_probs=147.6
Q ss_pred HhhhcCCHHHHHHHHHHcCcccc-----hhhhHhh--hcH---HHHHHHhhcC--CChHHHHHHHHHHHhcc-----CHH
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQ-----HVPRMLL--ENT---DKLEKYIIQS--KDPVLLKWWAQYIESTE-----DMD 67 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~-----~~~~~~~--~~~---~~~~~~~~~~--~~~~l~~~~a~~~e~~~-----~~~ 67 (1074)
...+.|++++|.++|+++-.... ....+|+ +++ .++.++..+. .++.-+..+|..+...+ +++
T Consensus 12 ~~~~~g~~~~A~~~~~~aa~~g~~~A~~~Lg~~y~~~g~~~d~~~A~~~~~~A~~~~~~A~~~Lg~~~~~~~~~~~~~~~ 91 (452)
T 3e4b_A 12 EALKRGDTVTAQQNYQQLAELGYSEAQVGLADIQVGTRDPAQIKQAEATYRAAADTSPRAQARLGRLLAAKPGATEAEHH 91 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCTGGGTCC----------------------------CHHHHHHHHHTC--CCHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhCCCCCCcCHH
Confidence 45677999999999998743321 1122332 233 5555555552 25666677788555544 889
Q ss_pred HHHHHHHHhhC---h---hhhhhHhhccCCHHH---HHHH---HHhcCChHHHHHHHHHHHhcCChHHH----HHHHHHh
Q psy14927 68 LAMKYYEEARD---Y---LSMVRVLCFLQDFSR---AAEL---ANASGDTAAAYHLARQYENSGQFDEA----IHFYSVA 131 (1074)
Q Consensus 68 ~A~~~y~~a~d---~---~~~vr~l~~~~~~~~---a~~i---~~~~~~~~~~~~la~~~~~~g~~~~A----i~~y~~a 131 (1074)
+|.++|.++-+ . ..+..+|...+..++ +.+. ..+.++..+.+.+|..|...+.++++ ..++..+
T Consensus 92 ~A~~~~~~Aa~~g~~~A~~~Lg~~y~~~~~~~~~~~a~~~~~~a~~~g~~~a~~~Lg~~y~~~~~~~~~~~~a~~~~~~a 171 (452)
T 3e4b_A 92 EAESLLKKAFANGEGNTLIPLAMLYLQYPHSFPNVNAQQQISQWQAAGYPEAGLAQVLLYRTQGTYDQHLDDVERICKAA 171 (452)
T ss_dssp HHHHHHHHHHHTTCSSCHHHHHHHHHHCGGGCTTCCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCGGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcccCHHHHHHHHHHH
Confidence 99999988643 2 233344444443222 2222 22567888899999999988865444 4444443
Q ss_pred C--ChHHHHHHHHH---hC---chHHHHHH----hhhcCchhH--HHHHHHHccCChhHHHHHHHHhCChHHHHHHHHhh
Q psy14927 132 G--SCGNAVRLCKE---QA---LDDQLWNL----ALSAGPSEQ--IEAATYLETIEPDKAVLLYHKAGALHKALDLAFKL 197 (1074)
Q Consensus 132 ~--~~~~A~~la~~---~~---~~~~~~~l----~~~~~~~~~--~~~A~~~e~~~~~~A~~ly~kaG~~~kAl~l~~~~ 197 (1074)
. ..+--+.|+.. .| ..+..+.+ +...++... ..+|..|..+.. -.+++.+|++++.+.
T Consensus 172 ~~~~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~--------~~~d~~~A~~~~~~a 243 (452)
T 3e4b_A 172 LNTTDICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATL--------GTPDEKTAQALLEKI 243 (452)
T ss_dssp TTTCTTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGG--------SSCCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC--------CCCCHHHHHHHHHHH
Confidence 2 11211222211 11 11111111 111222222 334444433200 003444444444443
Q ss_pred ccCCcc-hHHHHHHHHHH--hcCCChhhHHHhhhhc---chHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCCHHHH
Q psy14927 198 TLSNSG-LVFQIKAMKCL--LKSGDTNKIIFFAGVS---RMKEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKAPHLL 271 (1074)
Q Consensus 198 ~~~~~~-~~~~~~a~k~l--~~~~~~~~~i~~a~~~---r~~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~~~~a 271 (1074)
. .++. -++.+ +.-.+ ...+|.++++.+-..+ ...+-+..++.++... .+.|+++...+.+|.++- ....
T Consensus 244 a-~g~~~a~~~L-g~~~~~~~~~~d~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~~G--~g~~~d~~~A~~~~~~Aa-~g~~ 318 (452)
T 3e4b_A 244 A-PGYPASWVSL-AQLLYDFPELGDVEQMMKYLDNGRAADQPRAELLLGKLYYEG--KWVPADAKAAEAHFEKAV-GREV 318 (452)
T ss_dssp G-GGSTHHHHHH-HHHHHHSGGGCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHC--SSSCCCHHHHHHHHHTTT-TTCH
T ss_pred c-CCCHHHHHHH-HHHHHhCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcC--CCCCCCHHHHHHHHHHHh-CCCH
Confidence 3 1110 11111 11111 3366776665544432 2334444455544432 255677888888888887 3222
Q ss_pred HHHHHHHHhHHHHh---hcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHh---hcCChHHHhhHHHHHHH
Q psy14927 272 ANFYVSCAQVEIDE---FGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEID---EFGNYEKGLGALNEAKR 345 (1074)
Q Consensus 272 a~~~~~~a~~ei~e---~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~ 345 (1074)
. ....++..-.+- -.|+.+|...+..|.+ .+.... +..+..+|.. +-.|+.+|...|.+++.
T Consensus 319 ~-A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~----~g~~~A-------~~~Lg~~y~~G~g~~~d~~~A~~~~~~A~~ 386 (452)
T 3e4b_A 319 A-ADYYLGQIYRRGYLGKVYPQKALDHLLTAAR----NGQNSA-------DFAIAQLFSQGKGTKPDPLNAYVFSQLAKA 386 (452)
T ss_dssp H-HHHHHHHHHHTTTTSSCCHHHHHHHHHHHHT----TTCTTH-------HHHHHHHHHSCTTBCCCHHHHHHHHHHHHT
T ss_pred H-HHHHHHHHHHCCCCCCcCHHHHHHHHHHHHh----hChHHH-------HHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 2 222333333121 2399999999888765 233222 1223333433 12588888888888776
Q ss_pred H
Q psy14927 346 C 346 (1074)
Q Consensus 346 ~ 346 (1074)
.
T Consensus 387 ~ 387 (452)
T 3e4b_A 387 Q 387 (452)
T ss_dssp T
T ss_pred C
Confidence 4
No 215
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.77 E-value=4.2e-05 Score=91.76 Aligned_cols=45 Identities=24% Similarity=0.258 Sum_probs=34.2
Q ss_pred CCCeeeCCCCCCCCCCEEEecccCC-C--------CCcHHHHHHHHHHHHHHhh
Q psy14927 1027 KGRVPVNSRFQTVIPNIFAIGDCIH-G--------PMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1027 ~G~I~Vd~~~~ts~~~IyAiGD~~~-~--------~~~~~~A~~~G~~aA~~I~ 1071 (1074)
-|.|.||...+|++||+||+|+|+. + ......|+--|++|+.+++
T Consensus 354 ~GGi~vd~~~~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa 407 (540)
T 1chu_A 354 CGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDIT 407 (540)
T ss_dssp SCEEECCTTCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEECCCCCCccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHH
Confidence 4779999999999999999999973 2 1123456667888888775
No 216
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.77 E-value=0.00042 Score=71.31 Aligned_cols=20 Identities=25% Similarity=0.237 Sum_probs=15.1
Q ss_pred hhhcCCHHHHHHHHHHcCcc
Q psy14927 6 TMKNGDIDRAIRMFEKAETH 25 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~ 25 (1074)
+...|++++|+++|+++-..
T Consensus 18 ~~~~~~~~~A~~~~~~~~~~ 37 (225)
T 2vq2_A 18 YMRGQDYRQATASIEDALKS 37 (225)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHh
Confidence 45678888998888876543
No 217
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.75 E-value=4e-05 Score=91.53 Aligned_cols=43 Identities=19% Similarity=0.210 Sum_probs=38.5
Q ss_pred eeeCCCCCC-CCCCEEEecccCCCCCcHHHHHHHHHHHHHHhhC
Q psy14927 1030 VPVNSRFQT-VIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 1030 I~Vd~~~~t-s~~~IyAiGD~~~~~~~~~~A~~~G~~aA~~I~~ 1072 (1074)
|.+|++++| +++|+|+|||+++....+..|..+|..+|..|+.
T Consensus 497 i~~~~~~~~~~~~gly~~GegaG~a~gi~~Aa~~G~~~a~~i~~ 540 (549)
T 3nlc_A 497 IKRGKDFQSVNLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVAR 540 (549)
T ss_dssp CCCTTTTSCTTCBTEEECHHHHTSCCSHHHHHHHHHHHHHHHHH
T ss_pred EEECCCceECCcCCEEEccccCChhhHHHHHHHHHHHHHHHHHH
Confidence 678899998 8999999999999877888999999999998863
No 218
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.74 E-value=3.2e-05 Score=90.74 Aligned_cols=103 Identities=18% Similarity=0.202 Sum_probs=68.3
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhcccccccc--------------chhhhhh-------hh---------h
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL--------------NLETMMG-------TK---------S 838 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~--------------~~~~~~~-------~~---------~ 838 (1074)
..+|+|||||++|+++|+.|++ +++|+.+..+... .+..+.. .. .
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 3459999999999999999998 7888766543211 0000000 00 0
Q ss_pred H-------------------------HHhhhhhhHHHHhhhCCeEEEee-eEEEec--CCe-EEEEeCCCCeeEEEcCeE
Q psy14927 839 A-------------------------AVKALTGGIAHLFKSNKVTQLNG-HGKITG--PNT-VTVIKSDGSTEEVKTKNI 889 (1074)
Q Consensus 839 ~-------------------------~~~~l~~~~~~~l~~~gV~~~~g-~v~~id--~~~-~~v~~~~G~~~~i~~d~l 889 (1074)
. ....+...+.+.+.+.||+++.+ +|+.+. .+. +.|.+.+| .++.+|.|
T Consensus 106 ~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G--~~i~Ad~V 183 (447)
T 2i0z_A 106 DIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTG--EVLETNHV 183 (447)
T ss_dssp HHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTC--CEEECSCE
T ss_pred HHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCC--CEEECCEE
Confidence 0 01233344666677789999998 576664 344 66777887 46999999
Q ss_pred EEccCCCCC
Q psy14927 890 LIATGSEVT 898 (1074)
Q Consensus 890 IIATG~~p~ 898 (1074)
|+|||+.+.
T Consensus 184 VlAtGg~s~ 192 (447)
T 2i0z_A 184 VIAVGGKSV 192 (447)
T ss_dssp EECCCCSSS
T ss_pred EECCCCCcC
Confidence 999999863
No 219
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.73 E-value=0.00015 Score=76.05 Aligned_cols=105 Identities=17% Similarity=0.259 Sum_probs=46.6
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh------
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY------ 79 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~------ 79 (1074)
+...|++++|+.+|+++-... +.++..+..+|..+...|++++|.++|.++-+.
T Consensus 33 ~~~~~~~~~A~~~~~~~l~~~--------------------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 92 (243)
T 2q7f_A 33 GSEFGDYEKAAEAFTKAIEEN--------------------KEDAIPYINFANLLSSVNELERALAFYDKALELDSSAAT 92 (243)
T ss_dssp ---------CCTTHHHHHTTC--------------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHhhCHHHHHHHHHHHHHhC--------------------cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchH
Confidence 345567777777777664332 223444445555555555555555555543221
Q ss_pred --hhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChHHHHHHHHH
Q psy14927 80 --LSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFDEAIHFYSV 130 (1074)
Q Consensus 80 --~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~~Ai~~y~~ 130 (1074)
..+.+++...|++++|.+..+. +.+......+|..+...|++++|+++|.+
T Consensus 93 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 150 (243)
T 2q7f_A 93 AYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQR 150 (243)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 1233344455555555544431 23344445555555555555555555444
No 220
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.72 E-value=0.00012 Score=86.48 Aligned_cols=123 Identities=15% Similarity=0.111 Sum_probs=87.4
Q ss_pred cCCHHHHHHHHHHcCcccchhhhHh-------h--hcH-HHHHHHhhc-----CCChHHHHHHHHHHHhccCHHHHHHHH
Q psy14927 9 NGDIDRAIRMFEKAETHQQHVPRML-------L--ENT-DKLEKYIIQ-----SKDPVLLKWWAQYIESTEDMDLAMKYY 73 (1074)
Q Consensus 9 ~g~~~eA~~~Ye~~~~~~~~~~~~~-------~--~~~-~~~~~~~~~-----~~~~~l~~~~a~~~e~~~~~~~A~~~y 73 (1074)
.+++++|++.+++.......-++.+ . +++ .++.++..+ ++++..|..+|..+...|++++|.++|
T Consensus 81 ~~~~~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~ 160 (474)
T 4abn_A 81 QEEMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCF 160 (474)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3457888888877654433222222 1 366 666555554 566888899999999999999999999
Q ss_pred HHhhCh-------hhhhhHhhcc---------CCHHHHHHHHHh-----cCChHHHHHHHHHHHhc--------CChHHH
Q psy14927 74 EEARDY-------LSMVRVLCFL---------QDFSRAAELANA-----SGDTAAAYHLARQYENS--------GQFDEA 124 (1074)
Q Consensus 74 ~~a~d~-------~~~vr~l~~~---------~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~--------g~~~~A 124 (1074)
.++=.. ..+..+|..+ |++++|.+..++ +.+..+.+.+|..|... |++++|
T Consensus 161 ~~al~~~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A 240 (474)
T 4abn_A 161 SGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQA 240 (474)
T ss_dssp HHHHTTCCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHhhCCCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHH
Confidence 987543 3455667778 888888887763 46777888888888888 888888
Q ss_pred HHHHHHh
Q psy14927 125 IHFYSVA 131 (1074)
Q Consensus 125 i~~y~~a 131 (1074)
+++|.++
T Consensus 241 ~~~~~~a 247 (474)
T 4abn_A 241 LSAYAQA 247 (474)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8776543
No 221
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=97.66 E-value=0.0018 Score=64.88 Aligned_cols=138 Identities=14% Similarity=0.064 Sum_probs=102.8
Q ss_pred hHHHHHHHHHHHHhhhcHHHHHHHHHHh-----hC---HHHHHHHHHHcCCHHHHHHHHH----hc-CCcHHHHHHHHHH
Q psy14927 623 YRVLLKWWAQYIESTEDMDLAMKYYEEA-----RD---YLSMVRVLCFLQDFSRAAELAN----AS-GDTAAAYHLARQY 689 (1074)
Q Consensus 623 ~~~l~~~~a~~~e~~~~~~~A~~~y~~a-----g~---~~~ai~~~~~~~~~~~a~~v~~----~~-~~~~~~~~~A~~~ 689 (1074)
++.++...|......|+|++|+++|.++ .+ +-....+|...++|++|....+ .. ........+|..+
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSAN 83 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 3568888899999999999999999998 23 3344556899999999997773 23 3344444889999
Q ss_pred HhcCCHHHHHHHHHHcCC-----HHHHHHH------hccHHHHHHHHHHhC--CcccHHHHHHHHHHHHHcCCHHHHHHH
Q psy14927 690 ENSGQFDEAIHFYSVAGS-----CGNAVRL------CGQLDAVESIASELN--VQSDQDLILKCASYFARREHHDRAVQM 756 (1074)
Q Consensus 690 ~~~g~~~~A~~~~~kag~-----~~~Av~m------a~~w~~a~~~A~~~~--~~~~~~~~~~~a~~~~~~~~~~~Ai~~ 756 (1074)
...++++.|.+.|.++-. +.--..+ .++|++|...-++.. .+..++.+..+|.-+...|++++|+++
T Consensus 84 ~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~ 163 (184)
T 3vtx_A 84 FMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKY 163 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHH
Confidence 999999999999988732 2111111 488888887766642 345568889999998999999999888
Q ss_pred HHHh
Q psy14927 757 YAIA 760 (1074)
Q Consensus 757 y~~a 760 (1074)
|.++
T Consensus 164 ~~~a 167 (184)
T 3vtx_A 164 FKKA 167 (184)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
No 222
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=97.65 E-value=0.0013 Score=70.12 Aligned_cols=240 Identities=13% Similarity=0.070 Sum_probs=112.1
Q ss_pred HhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHH
Q psy14927 61 ESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRL 140 (1074)
Q Consensus 61 e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~l 140 (1074)
...|++++|.++|.+|-+....+ + ..+++ ....+...+|..|...|++++|+++|.+ |+++
T Consensus 12 ~~~~~~~~A~~~~~~al~~~~~~--~-~~~~~----------~~~~~~~~l~~~~~~~g~~~~A~~~~~~------al~~ 72 (283)
T 3edt_B 12 SGLVPRGSAVPLCKQALEDLEKT--S-GHDHP----------DVATMLNILALVYRDQNKYKEAAHLLND------ALAI 72 (283)
T ss_dssp -CCSCSSSHHHHHHHHHHHHHHH--H-CSSSH----------HHHHHHHHHHHHHHHTTCHHHHHHHHHH------HHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHh--c-CCCCH----------HHHHHHHHHHHHHHHcccHHHHHHHHHH------HHHH
Confidence 35777788888877665542110 0 11112 2345677899999999999999999754 5666
Q ss_pred HHHh--CchHHHHHHhhhcCchhHHHHHHHHcc-CChhHHHHHHHHhCChHHHHHHHHhhccCCc-ch-HHHHHHHHHHh
Q psy14927 141 CKEQ--ALDDQLWNLALSAGPSEQIEAATYLET-IEPDKAVLLYHKAGALHKALDLAFKLTLSNS-GL-VFQIKAMKCLL 215 (1074)
Q Consensus 141 a~~~--~~~~~~~~l~~~~~~~~~~~~A~~~e~-~~~~~A~~ly~kaG~~~kAl~l~~~~~~~~~-~~-~~~~~a~k~l~ 215 (1074)
+++. +..... ...+...|..+.. +++++|..+|.++ ++++.+....++ .. ..+..-..++.
T Consensus 73 ~~~~~~~~~~~~--------~~~~~~l~~~~~~~g~~~~A~~~~~~a------l~~~~~~~~~~~~~~~~~~~~la~~~~ 138 (283)
T 3edt_B 73 REKTLGKDHPAV--------AATLNNLAVLYGKRGKYKEAEPLCKRA------LEIREKVLGKFHPDVAKQLNNLALLCQ 138 (283)
T ss_dssp HHHHTCTTCHHH--------HHHHHHHHHHHHTTTCHHHHHHHHHHH------HHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCcchHH--------HHHHHHHHHHHHHhccHHHHHHHHHHH------HHHHHHHcCCCChHHHHHHHHHHHHHH
Confidence 6554 111110 1223345555554 6778887777654 333333211110 00 01112233445
Q ss_pred cCCChhhHHHhhhhcchHHHHHHHHHHHhcCCCCCCh---hHHHHHHHHHHccCCHHHHHHHHHHHHhHHH-Hhhc----
Q psy14927 216 KSGDTNKIIFFAGVSRMKEIYVMAANYLQSSDWKSQP---ELLKSIISFYSKGKAPHLLANFYVSCAQVEI-DEFG---- 287 (1074)
Q Consensus 216 ~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~~~~~~~---~~~~~i~~~Y~k~~~~~~aa~~~~~~a~~ei-~e~~---- 287 (1074)
..|+.++++.+.. .+.+.........+| .....+..+|.+.|.+++|..++..+-..-- ..++
T Consensus 139 ~~g~~~~A~~~~~---------~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~ 209 (283)
T 3edt_B 139 NQGKAEEVEYYYR---------RALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNG 209 (283)
T ss_dssp TTTCHHHHHHHHH---------HHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCS
T ss_pred HcCCHHHHHHHHH---------HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcch
Confidence 5666665554433 222222222111222 2233345555555555555555554433210 0000
Q ss_pred ----------------CHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhhcCChHHHhhHHHHHHH
Q psy14927 288 ----------------NYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEIDEFGNYEKGLGALNEAKR 345 (1074)
Q Consensus 288 ----------------~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 345 (1074)
+.......+.++...+.......|... .....+..+|.+ .|+++.|..+|.++-.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~la~~~~~-~g~~~~A~~~~~~al~ 280 (283)
T 3edt_B 210 DNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVN--TTLRSLGALYRR-QGKLEAAHTLEDCASR 280 (283)
T ss_dssp SCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHH--HHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHH--HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 000001112222223333332333221 122245677777 7999999999987753
No 223
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.62 E-value=0.0029 Score=66.66 Aligned_cols=84 Identities=11% Similarity=-0.053 Sum_probs=66.5
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhhCh--------hhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHH
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEARDY--------LSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYE 116 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~--------~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~ 116 (1074)
+..+...|..+...|++++|.++|.++-+. ..+..++...|++++|.+..++ +.+......+|..|.
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 116 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLY 116 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH
Confidence 456777899999999999999999886432 3456668889999999887662 456677888999999
Q ss_pred hcCChHHHHHHHHHhCC
Q psy14927 117 NSGQFDEAIHFYSVAGS 133 (1074)
Q Consensus 117 ~~g~~~~Ai~~y~~a~~ 133 (1074)
..|++++|+++|.++-.
T Consensus 117 ~~g~~~~A~~~~~~~~~ 133 (252)
T 2ho1_A 117 EQKRYEEAYQRLLEASQ 133 (252)
T ss_dssp HTTCHHHHHHHHHHHTT
T ss_pred HHhHHHHHHHHHHHHHh
Confidence 99999999998877654
No 224
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.60 E-value=0.00067 Score=67.16 Aligned_cols=126 Identities=15% Similarity=0.188 Sum_probs=90.5
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHh-------h--hcHHHHHHHhhc-----CCChHHHHHHHHHHHhccCHHHHHH
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRML-------L--ENTDKLEKYIIQ-----SKDPVLLKWWAQYIESTEDMDLAMK 71 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~-------~--~~~~~~~~~~~~-----~~~~~l~~~~a~~~e~~~~~~~A~~ 71 (1074)
+...|++++|+..|+++-.....-+..+ . +++..+..++.+ +.++..+..+|..+...|++++|.+
T Consensus 18 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 97 (186)
T 3as5_A 18 HAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVP 97 (186)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHH
Confidence 4567999999999999876543332222 1 466665555554 4667788888888888889988888
Q ss_pred HHHHhhC--------hhhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 72 YYEEARD--------YLSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 72 ~y~~a~d--------~~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
+|.++-. +..+.+++...|++++|.+..++ +.+......+|..|...|++++|+++|.++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 170 (186)
T 3as5_A 98 LLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKA 170 (186)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 8887533 23455667788888888877653 345677778888888888888888877654
No 225
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.55 E-value=0.0099 Score=64.96 Aligned_cols=97 Identities=7% Similarity=-0.042 Sum_probs=68.0
Q ss_pred hhcHHHHHHHhhc--CCChH----HHHHHHHHHHhccCHHHHHHHHHHhhCh-----hhhhhHhhccCCHHHHHHHHHh-
Q psy14927 34 LENTDKLEKYIIQ--SKDPV----LLKWWAQYIESTEDMDLAMKYYEEARDY-----LSMVRVLCFLQDFSRAAELANA- 101 (1074)
Q Consensus 34 ~~~~~~~~~~~~~--~~~~~----l~~~~a~~~e~~~~~~~A~~~y~~a~d~-----~~~vr~l~~~~~~~~a~~i~~~- 101 (1074)
.+++..+.++..+ ..+|. ....+++.+...|+++.|...+...... ..+..+|+..++.++|.+..++
T Consensus 12 ~g~y~~ai~~~~~~~~~~p~~~~e~~~~l~r~yi~~g~~~~al~~~~~~~~~~~~a~~~la~~~~~~~~~~~A~~~l~~l 91 (291)
T 3mkr_A 12 IGSYQQCINEAQRVKPSSPERDVERDVFLYRAYLAQRKYGVVLDEIKPSSAPELQAVRMFAEYLASHSRRDAIVAELDRE 91 (291)
T ss_dssp TTCHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCHHHHHHHSCTTSCHHHHHHHHHHHHHHCSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHCCCHHHHHHHhcccCChhHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 4677777777654 23333 4456689999999999999877554221 2234457778888888776652
Q ss_pred ------cCChHHHHHHHHHHHhcCChHHHHHHHHH
Q psy14927 102 ------SGDTAAAYHLARQYENSGQFDEAIHFYSV 130 (1074)
Q Consensus 102 ------~~~~~~~~~la~~~~~~g~~~~Ai~~y~~ 130 (1074)
+++....+.+|..+...|++++|++.|.+
T Consensus 92 l~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~ 126 (291)
T 3mkr_A 92 MSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ 126 (291)
T ss_dssp HHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT
T ss_pred HhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC
Confidence 34566778888888888998888888776
No 226
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.55 E-value=0.00056 Score=73.06 Aligned_cols=84 Identities=12% Similarity=0.068 Sum_probs=57.0
Q ss_pred CCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh--------hhhhhHhhccCCHHHHHHHHHh----cCChHHHHHHHHH
Q psy14927 47 SKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY--------LSMVRVLCFLQDFSRAAELANA----SGDTAAAYHLARQ 114 (1074)
Q Consensus 47 ~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~--------~~~vr~l~~~~~~~~a~~i~~~----~~~~~~~~~la~~ 114 (1074)
+.++..+..+|..+...|++++|.++|.++-.. ..+..++..+|++++|.+..+. ..+..........
T Consensus 74 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 153 (275)
T 1xnf_A 74 PDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYL 153 (275)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 455778888888888888888888888876442 3445567888888888877653 1222233333344
Q ss_pred HHhcCChHHHHHHHHH
Q psy14927 115 YENSGQFDEAIHFYSV 130 (1074)
Q Consensus 115 ~~~~g~~~~Ai~~y~~ 130 (1074)
+...|++++|+++|.+
T Consensus 154 ~~~~~~~~~A~~~~~~ 169 (275)
T 1xnf_A 154 AEQKLDEKQAKEVLKQ 169 (275)
T ss_dssp HHHHHCHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHH
Confidence 5666888888888754
No 227
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.54 E-value=0.00031 Score=79.51 Aligned_cols=60 Identities=15% Similarity=0.242 Sum_probs=48.1
Q ss_pred CHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCe-EEEEEeeccCCCCceEEEcCEEEEccCCcc
Q psy14927 947 DGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDN-ITVTIENVKDPTKKEELSCDALLVCVGRRP 1010 (1074)
Q Consensus 947 ~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p 1010 (1074)
+..+...+.+.+++.|++++++++|+++..++++ +.|.+.+ |+..++.+|.||+|+|...
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~----g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGG----AEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECT----TSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECC----CceeEEEeCEEEECCCcch
Confidence 3567778888899999999999999999987655 6665443 5457899999999999753
No 228
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=97.52 E-value=0.0013 Score=68.66 Aligned_cols=112 Identities=11% Similarity=0.167 Sum_probs=87.5
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhC------
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARD------ 78 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d------ 78 (1074)
.+...|++++|+..|+++-..+. ..++..+.+.|..+...|++++|.++|.++-.
T Consensus 16 ~~~~~~~~~~A~~~~~~al~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 76 (228)
T 4i17_A 16 DALNAKNYAVAFEKYSEYLKLTN-------------------NQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLA 76 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTT-------------------TCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHH
T ss_pred HHHHccCHHHHHHHHHHHHhccC-------------------CCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchH
Confidence 35567888888888888764330 14567788899999999999999999998643
Q ss_pred --hhhhhhHhhccCCHHHHHHHHHh-----cCCh-------HHHHHHHHHHHhcCChHHHHHHHHHhCChH
Q psy14927 79 --YLSMVRVLCFLQDFSRAAELANA-----SGDT-------AAAYHLARQYENSGQFDEAIHFYSVAGSCG 135 (1074)
Q Consensus 79 --~~~~vr~l~~~~~~~~a~~i~~~-----~~~~-------~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~ 135 (1074)
+..+..++..+|++++|.+..++ +.+. .....+|..+...|++++|+++|.++-..+
T Consensus 77 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 147 (228)
T 4i17_A 77 NAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVT 147 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcC
Confidence 34566778899999999887763 4455 457789999999999999999998886643
No 229
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.50 E-value=0.00083 Score=67.28 Aligned_cols=141 Identities=15% Similarity=0.143 Sum_probs=94.0
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhh---
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLS--- 81 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~--- 81 (1074)
.+...|++++|+..|+++-..+ ++++..+..+|..+...|++++|.++|.++-....
T Consensus 15 ~~~~~g~~~~A~~~~~~al~~~--------------------P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~ 74 (176)
T 2r5s_A 15 ELLQQGEHAQALNVIQTLSDEL--------------------QSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNS 74 (176)
T ss_dssp HHHHTTCHHHHHHHHHTSCHHH--------------------HTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHC--------------------CCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChH
Confidence 4567888899998888877433 34578899999999999999999999988744321
Q ss_pred h----hhH-hhcc-CC---HHHHHHHHH-hcCChHHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHH
Q psy14927 82 M----VRV-LCFL-QD---FSRAAELAN-ASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLW 151 (1074)
Q Consensus 82 ~----vr~-l~~~-~~---~~~a~~i~~-~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~ 151 (1074)
. ..+ +... +. .....+... .+++..+.+.+|..+...|++++|++.|.++-..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~---------------- 138 (176)
T 2r5s_A 75 YKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVN---------------- 138 (176)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----------------
T ss_pred HHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhC----------------
Confidence 1 111 1111 11 222222222 56788899999999999999999999887542211
Q ss_pred HHhhhc-CchhHHHHHHHHcc-CChhHHHHHHHHh
Q psy14927 152 NLALSA-GPSEQIEAATYLET-IEPDKAVLLYHKA 184 (1074)
Q Consensus 152 ~l~~~~-~~~~~~~~A~~~e~-~~~~~A~~ly~ka 184 (1074)
+.. .+......+..|.. |++++|+..|.++
T Consensus 139 ---p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~a 170 (176)
T 2r5s_A 139 ---LGAQDGEVKKTFMDILSALGQGNAIASKYRRQ 170 (176)
T ss_dssp ---TTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred ---cccChHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 221 12334456666666 7788888888743
No 230
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.47 E-value=7.9e-05 Score=88.66 Aligned_cols=54 Identities=17% Similarity=0.346 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeE-EEEEeeccCCCCceEEEcCEEEEccC
Q psy14927 948 GEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNI-TVTIENVKDPTKKEELSCDALLVCVG 1007 (1074)
Q Consensus 948 ~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~~~~i~~D~vi~a~G 1007 (1074)
..+.+.+.+.+++.|++|++++.|++|..+++++ .|++.+ ++++.+|.||.+++
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~------g~~~~ad~VV~~a~ 275 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLED------GRRFLTQAVASNAD 275 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETT------SCEEECSCEEECCC
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecC------CcEEEcCEEEECCC
Confidence 4567788888999999999999999999877764 366554 56899999998764
No 231
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.44 E-value=0.00013 Score=79.98 Aligned_cols=103 Identities=16% Similarity=0.116 Sum_probs=62.1
Q ss_pred hhhhhhccccchHHHHHHHhh------hhhhhccccccccchh--------------------hhhh-----h-hhHHHh
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT------KLFTQAGDKGVKLNLE--------------------TMMG-----T-KSAAVK 842 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~------~l~e~~~~~g~~~~~~--------------------~~~~-----~-~~~~~~ 842 (1074)
.+|+||||||+|+++|+.|++ +++|+.+..++..... .++. . ......
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 349999999999999999987 5788876554321100 0000 0 000112
Q ss_pred hhhhhHHHHhhh-CCeEEEee-eEEEec--CCeE-EEEeC---------C---CCeeEEEcCeEEEccCCCC
Q psy14927 843 ALTGGIAHLFKS-NKVTQLNG-HGKITG--PNTV-TVIKS---------D---GSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 843 ~l~~~~~~~l~~-~gV~~~~g-~v~~id--~~~~-~v~~~---------~---G~~~~i~~d~lIIATG~~p 897 (1074)
.+...+.+.+.+ .||+++.+ +|+.+. .+.+ .|.+. + |+..++.+|.||+|||..+
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDG 191 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSS
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCch
Confidence 233334444544 69999998 577664 3322 23321 2 3336799999999999865
No 232
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=97.43 E-value=0.0026 Score=74.15 Aligned_cols=126 Identities=14% Similarity=0.108 Sum_probs=82.0
Q ss_pred hhcCCHHHHHHHHHHcCcccc--------hhhhHh---------h--hcHHHHHHHhhc-----CCChHHHHHHHHHH--
Q psy14927 7 MKNGDIDRAIRMFEKAETHQQ--------HVPRML---------L--ENTDKLEKYIIQ-----SKDPVLLKWWAQYI-- 60 (1074)
Q Consensus 7 ~~~g~~~eA~~~Ye~~~~~~~--------~~~~~~---------~--~~~~~~~~~~~~-----~~~~~l~~~~a~~~-- 60 (1074)
..+|++++|..+|+++..... ..+..+ + ++++++.++..+ ++++..+..++...
T Consensus 105 ~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~ 184 (472)
T 4g1t_A 105 YHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYR 184 (472)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 467999999999998754321 223322 1 245555555544 57788888887664
Q ss_pred -HhccCHHHHHHHHHHhhChh-----h-------hhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCChH
Q psy14927 61 -ESTEDMDLAMKYYEEARDYL-----S-------MVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQFD 122 (1074)
Q Consensus 61 -e~~~~~~~A~~~y~~a~d~~-----~-------~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~ 122 (1074)
...++.++|.++|.++=... . ..+++...+++++|.+..+ .+....+...+|..|...|+++
T Consensus 185 l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~ 264 (472)
T 4g1t_A 185 LDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPD 264 (472)
T ss_dssp HHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHH
T ss_pred hcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchH
Confidence 44577788888888763321 1 1122345677888887765 3467778889999999999999
Q ss_pred HHHHHHHHhC
Q psy14927 123 EAIHFYSVAG 132 (1074)
Q Consensus 123 ~Ai~~y~~a~ 132 (1074)
+|+++|.++-
T Consensus 265 ~A~~~~~~al 274 (472)
T 4g1t_A 265 KAIELLKKAL 274 (472)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 233
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.41 E-value=0.00044 Score=80.04 Aligned_cols=59 Identities=20% Similarity=0.286 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCc
Q psy14927 949 EVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRR 1009 (1074)
Q Consensus 949 ~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~ 1009 (1074)
.+...+.+.+++.||+++.+++|+++..++++..+.+... +|+..++.+|.||.|+|..
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~--~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDI--NGNKREIEARFIIDASGYG 165 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEET--TSCEEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcC--CCCEEEEEcCEEEECCCCc
Confidence 3455666777778999999999999998777765665542 2544589999999999965
No 234
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.40 E-value=0.011 Score=59.64 Aligned_cols=158 Identities=11% Similarity=0.055 Sum_probs=90.3
Q ss_pred hHHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHccCChhHHHHHHHHh
Q psy14927 105 TAAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLETIEPDKAVLLYHKA 184 (1074)
Q Consensus 105 ~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~~~~~~A~~ly~ka 184 (1074)
..+...+|..+...|++++|+++|. +|++++++.+........ +... +.+|...
T Consensus 26 ~~~~~~l~~~~~~~g~~~~A~~~~~------~al~~~~~~~~~~~~~~~--------~~~l------------~~~~~~~ 79 (203)
T 3gw4_A 26 SGARFMLGYVYAFMDRFDEARASFQ------ALQQQAQKSGDHTAEHRA--------LHQV------------GMVERMA 79 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHH------HHHHHHHTTCCHHHHHHH--------HHHH------------HHHHHHT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHH------HHHHHHHHcCCcHHHHHH--------HHHH------------HHHHHHc
Confidence 3467789999999999999999864 567777776543322211 1123 3344444
Q ss_pred CChHHHHHHHHhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHh-cCCCCCChhHHHHHHHHHH
Q psy14927 185 GALHKALDLAFKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQ-SSDWKSQPELLKSIISFYS 263 (1074)
Q Consensus 185 G~~~kAl~l~~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~-~~~~~~~~~~~~~i~~~Y~ 263 (1074)
|++.+|++.+.+ |++..-+.++... .....+...+..+. ..+++.-...+...+....
T Consensus 80 g~~~~A~~~~~~-------------al~~~~~~~~~~~--------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 138 (203)
T 3gw4_A 80 GNWDAARRCFLE-------------ERELLASLPEDPL--------AASANAYEVATVALHFGDLAGARQEYEKSLVYAQ 138 (203)
T ss_dssp TCHHHHHHHHHH-------------HHHHHHHSCCCHH--------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHH-------------HHHHHHHcCccHH--------HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 444444444433 1222222331100 00111222222221 1122222244455555566
Q ss_pred ccCCHHHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCc
Q psy14927 264 KGKAPHLLANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLLKHNDSM 310 (1074)
Q Consensus 264 k~~~~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~ 310 (1074)
..+.....+..+...+... ...|+|++|...+.++++...+.+...
T Consensus 139 ~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~~~~~~~~ 184 (203)
T 3gw4_A 139 QADDQVAIACAFRGLGDLA-QQEKNLLEAQQHWLRARDIFAELEDSE 184 (203)
T ss_dssp HTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hccchHHHHHHHHHHHHHH-HHCcCHHHHHHHHHHHHHHHHHcCCHH
Confidence 6666666677777888887 889999999999999999998877543
No 235
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.40 E-value=0.00016 Score=87.19 Aligned_cols=103 Identities=17% Similarity=0.129 Sum_probs=65.9
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhcc-ccccc---cc---------------hhhhhhh-------------
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAG-DKGVK---LN---------------LETMMGT------------- 836 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~-~~g~~---~~---------------~~~~~~~------------- 836 (1074)
..+|+|||||+||++||+.+++ +++++.. ..|.. +. +......
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~ 100 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLN 100 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEEC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhcc
Confidence 3469999999999999999999 6777653 12211 00 0000000
Q ss_pred --h-h--------HHHhhhhhhHHHHhhh-CCeEEEeeeEEEec--CCeEE-EEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 837 --K-S--------AAVKALTGGIAHLFKS-NKVTQLNGHGKITG--PNTVT-VIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 837 --~-~--------~~~~~l~~~~~~~l~~-~gV~~~~g~v~~id--~~~~~-v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
. . .....+...+.+.+.+ .||+++.+.|+.+. .+.+. |.+.+| .++.+|.||+|||+.+.
T Consensus 101 ~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G--~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 101 RSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSG--RAIQAKAAILACGTFLN 175 (641)
T ss_dssp SSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTS--CEEEEEEEEECCTTCBT
T ss_pred cccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCC--cEEEeCEEEECcCCCCC
Confidence 0 0 0001233345566666 49999888888754 45554 777787 68999999999999864
No 236
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.36 E-value=0.00035 Score=80.12 Aligned_cols=57 Identities=12% Similarity=0.241 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhCCCEEEeCceEEEEEecCCeEE-EEEeeccCCCCceEEEcCEEEEccCCc
Q psy14927 950 VAKQFQRILGKQGMQFKLGTKVTGASKSGDNIT-VTIENVKDPTKKEELSCDALLVCVGRR 1009 (1074)
Q Consensus 950 ~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~-v~~~~~~~~g~~~~i~~D~vi~a~G~~ 1009 (1074)
+...+.+.+.+.||+++.+++|+++..+++.+. |++.+ .+.+.++.+|.||.|+|..
T Consensus 104 l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~---~~~~~~~~a~~vV~A~G~~ 161 (397)
T 3cgv_A 104 FDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRH---NNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEE---TTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEE---CCeEEEEEcCEEEECCCcc
Confidence 456667777788999999999999988777665 77754 3446789999999999964
No 237
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.35 E-value=0.0047 Score=62.40 Aligned_cols=90 Identities=13% Similarity=0.055 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhhC--------------hhhhhhHhhccCCHHHHHHHHHh-------cC-Ch--
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEARD--------------YLSMVRVLCFLQDFSRAAELANA-------SG-DT-- 105 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~d--------------~~~~vr~l~~~~~~~~a~~i~~~-------~~-~~-- 105 (1074)
...+..+|..+...|++++|.++|.++-+ +..+..++...|++++|.+..++ .+ +.
T Consensus 26 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 105 (203)
T 3gw4_A 26 SGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLA 105 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHH
Confidence 55677778888888888888888877654 12333445667777666655442 23 22
Q ss_pred --HHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhC
Q psy14927 106 --AAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQA 145 (1074)
Q Consensus 106 --~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~ 145 (1074)
.+...+|..+...|++++|+++|.+ |+++++..+
T Consensus 106 ~~~~~~~lg~~~~~~g~~~~A~~~~~~------al~~~~~~~ 141 (203)
T 3gw4_A 106 ASANAYEVATVALHFGDLAGARQEYEK------SLVYAQQAD 141 (203)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHH------HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHH------HHHHHHhcc
Confidence 2355777888888888888877543 455555543
No 238
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=97.33 E-value=0.0029 Score=69.65 Aligned_cols=123 Identities=12% Similarity=0.159 Sum_probs=75.9
Q ss_pred hcCCH-------HHHHHHHHHcCc-ccchhhhHh---------hhcHHHHHHHhhc-----CCChH-HHHHHHHHHHhcc
Q psy14927 8 KNGDI-------DRAIRMFEKAET-HQQHVPRML---------LENTDKLEKYIIQ-----SKDPV-LLKWWAQYIESTE 64 (1074)
Q Consensus 8 ~~g~~-------~eA~~~Ye~~~~-~~~~~~~~~---------~~~~~~~~~~~~~-----~~~~~-l~~~~a~~~e~~~ 64 (1074)
+.|++ ++|...|+++-. ....-+.++ .++++.+.....+ +.++. +|..|+.++...|
T Consensus 69 ~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~ 148 (308)
T 2ond_A 69 EKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAE 148 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHH
T ss_pred hccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhc
Confidence 45775 899999999876 332222221 1345555544443 33454 7777788777788
Q ss_pred CHHHHHHHHHHhhChh--------hhhhH-hhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCChHHHHHHHHH
Q psy14927 65 DMDLAMKYYEEARDYL--------SMVRV-LCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQFDEAIHFYSV 130 (1074)
Q Consensus 65 ~~~~A~~~y~~a~d~~--------~~vr~-l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~ 130 (1074)
++++|.+.|.++-... ..+.+ +..+|++++|.++.+ .+.+......++.++.+.|++++|+..|.+
T Consensus 149 ~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~ 228 (308)
T 2ond_A 149 GIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFER 228 (308)
T ss_dssp CHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 8888888877765431 11122 123677777776654 245666667777777777777777777653
No 239
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.33 E-value=0.087 Score=58.96 Aligned_cols=88 Identities=17% Similarity=0.066 Sum_probs=62.2
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHhhCh-------------hhhhhHhhccCCHHHHHHHHHh-------cCChH----H
Q psy14927 52 LLKWWAQYIESTEDMDLAMKYYEEARDY-------------LSMVRVLCFLQDFSRAAELANA-------SGDTA----A 107 (1074)
Q Consensus 52 l~~~~a~~~e~~~~~~~A~~~y~~a~d~-------------~~~vr~l~~~~~~~~a~~i~~~-------~~~~~----~ 107 (1074)
++...|..+...|++++|..++.++=+. ..+..++...|++++|.+..++ .++.. +
T Consensus 16 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 95 (373)
T 1hz4_A 16 FNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWS 95 (373)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 4455688888899999999999885221 1223446678999888876653 23332 2
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhC
Q psy14927 108 AYHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQA 145 (1074)
Q Consensus 108 ~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~ 145 (1074)
...+|..+..+|++++|+++|. +|++++.+.+
T Consensus 96 ~~~la~~~~~~G~~~~A~~~~~------~al~~~~~~~ 127 (373)
T 1hz4_A 96 LIQQSEILFAQGFLQTAWETQE------KAFQLINEQH 127 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHH------HHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHH------HHHHHHHHhc
Confidence 5678899999999999999875 4666666653
No 240
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.32 E-value=0.00026 Score=81.07 Aligned_cols=108 Identities=12% Similarity=0.098 Sum_probs=71.7
Q ss_pred hhhccccccccccCCceEEeccchh--h----c---cHHHH---hccccccccccccccccccccccCCcceEEEEeccC
Q psy14927 372 YLEMKRNQSFRSSNTDIILPVEKWT--L----L---SLARV---LEGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKL 439 (1074)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~--~----~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (1074)
.+ +..|+.+||+..+||..||... + + ...|+ +.++......+.+..+|..+...
T Consensus 257 ~g-i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~~~~~~~~~~p~~~~~~------------- 322 (384)
T 2v3a_A 257 RG-IVVDRSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGNPSQVAYGPMPVTVKTP------------- 322 (384)
T ss_dssp SS-EEECTTCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTCCCCCCCCCCCEEECCT-------------
T ss_pred CC-EEECCCCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCCCccCCCCCcceEEEEC-------------
Confidence 35 8889999999999999999842 2 1 13343 44444332233334455443221
Q ss_pred CCcccccccccCCCcEEEEeeccCccchhhhcCCCcceEEEEEECCCCcEEEEEEeCCChhHHHHHH
Q psy14927 440 TDKVLGVHIIGPGIEYKVGKFPFAANSRAKTNNDTDGFVKVLGDKLTDKVLGVHIIGPAAGELINEA 506 (1074)
Q Consensus 440 ~~~~lg~~~~~~g~~~~v~~~~~~~~~ra~~~~~~~G~~Kli~~~~~~~ilG~~iiG~~a~eli~~~ 506 (1074)
+.++.+...++...+++...+++.||+|++++ ++|+|+|+|++|++|+|+++..
T Consensus 323 ------------~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~-~~~~i~G~~~~g~~a~e~~~~~ 376 (384)
T 2v3a_A 323 ------------ACPLVVSPPPRGMDGQWLVEGSGTDLKVLCRD-TAGRVIGYALTGAAVNEKLALN 376 (384)
T ss_dssp ------------TSCEEEECCCTTCCCEEEEEEETTEEEEEEEC-TTSCEEEEEEEGGGGGGHHHHH
T ss_pred ------------CeeEEEecCCCCCCceEEEEecCCcEEEEEEc-cCCEEEEEEEECcchHHHHHHH
Confidence 23455554455555566666778899999887 6799999999999999988744
No 241
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.31 E-value=0.00021 Score=82.23 Aligned_cols=99 Identities=16% Similarity=0.203 Sum_probs=62.3
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhcccc----ccccch-hhhhhhhh--------------------H-----
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDK----GVKLNL-ETMMGTKS--------------------A----- 839 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~----g~~~~~-~~~~~~~~--------------------~----- 839 (1074)
.+|+||||||+|+++|+.|++ +++|+.+.. +..+.+ +....... .
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 85 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGER 85 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCCE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCCc
Confidence 359999999999999999999 788876542 111110 00000000 0
Q ss_pred -----------HHhhhhhhHHHHhhhCCeEEEee-eEEEe--cCCeEEEEeCCCCeeEEEcCeEEEccCCCC
Q psy14927 840 -----------AVKALTGGIAHLFKSNKVTQLNG-HGKIT--GPNTVTVIKSDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 840 -----------~~~~l~~~~~~~l~~~gV~~~~g-~v~~i--d~~~~~v~~~~G~~~~i~~d~lIIATG~~p 897 (1074)
....+...+.+.+ .|++++.+ +|+.+ +.+.+.|++.+| .++.+|.||.|+|...
T Consensus 86 ~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g--~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 86 VGSVPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSETVQMRFSDG--TKAEANWVIGADGGAS 153 (397)
T ss_dssp EEEEECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSCEEEEETTS--CEEEESEEEECCCTTC
T ss_pred cccccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCEEEEEECCC--CEEECCEEEECCCcch
Confidence 0001111122222 38889988 57766 355678888888 5799999999999975
No 242
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.31 E-value=0.00023 Score=81.78 Aligned_cols=102 Identities=12% Similarity=-0.008 Sum_probs=64.6
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhcccc-------ccccchh------------hhh-----------------
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDK-------GVKLNLE------------TMM----------------- 834 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~-------g~~~~~~------------~~~----------------- 834 (1074)
+|+||||||+|+++|+.|++ +++|+.+.. ++.+... .+.
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 83 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQR 83 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTEE
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCce
Confidence 49999999999999999998 778875531 1111000 000
Q ss_pred ---hhhh---H------HHhhhhhhHHHHhhhCCeEEEee-eEEEecC---CeEEEEe-CCCCeeEEEcCeEEEccCCCC
Q psy14927 835 ---GTKS---A------AVKALTGGIAHLFKSNKVTQLNG-HGKITGP---NTVTVIK-SDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 835 ---~~~~---~------~~~~l~~~~~~~l~~~gV~~~~g-~v~~id~---~~~~v~~-~~G~~~~i~~d~lIIATG~~p 897 (1074)
.... . ....+...+.+.+.+.|++++.+ +|+.+.. +.+.|++ .+|...++.+|.||.|+|...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 84 RRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp EEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTC
T ss_pred EEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCc
Confidence 0000 0 00123334555566679999999 5776643 3466766 677333799999999999875
No 243
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.30 E-value=0.0054 Score=62.75 Aligned_cols=83 Identities=13% Similarity=0.070 Sum_probs=59.1
Q ss_pred ChHHHHHHHHHHHhccCHHHHHHHHHHhhCh--------hhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHH
Q psy14927 49 DPVLLKWWAQYIESTEDMDLAMKYYEEARDY--------LSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQY 115 (1074)
Q Consensus 49 ~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~--------~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~ 115 (1074)
++..+...|..+...|++++|.++|.++-.. ..+..++...|++++|.+..+. +.+......+|..|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 86 (225)
T 2vq2_A 7 VSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFL 86 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 4567777788888888888888888764322 2344557777888887776652 34666777888888
Q ss_pred Hhc-CChHHHHHHHHHh
Q psy14927 116 ENS-GQFDEAIHFYSVA 131 (1074)
Q Consensus 116 ~~~-g~~~~Ai~~y~~a 131 (1074)
... |++++|+++|.++
T Consensus 87 ~~~~~~~~~A~~~~~~~ 103 (225)
T 2vq2_A 87 CGRLNRPAESMAYFDKA 103 (225)
T ss_dssp HTTTCCHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHH
Confidence 888 8888888877654
No 244
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.30 E-value=0.00032 Score=84.89 Aligned_cols=54 Identities=15% Similarity=0.020 Sum_probs=36.5
Q ss_pred hhhhHHHHhhhCCeEEEee-eEEEec--C-Ce---EEEEeCCCCeeEEEcCeEEEccCCCC
Q psy14927 844 LTGGIAHLFKSNKVTQLNG-HGKITG--P-NT---VTVIKSDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 844 l~~~~~~~l~~~gV~~~~g-~v~~id--~-~~---~~v~~~~G~~~~i~~d~lIIATG~~p 897 (1074)
+...+.+.+.+.||+++++ +|+.+. . .. +.+...+|+..++.+|.||+|||...
T Consensus 257 l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 257 VVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 3344566677789999999 466653 2 32 23333366445799999999999854
No 245
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.30 E-value=0.0034 Score=65.05 Aligned_cols=85 Identities=22% Similarity=0.202 Sum_probs=48.7
Q ss_pred ChHHHHHHHHHHHhccCHHHHHHHHHHhh---ChhhhhhH---hhccC----CHHHHHHHHH---hcCChHHHHHHHHHH
Q psy14927 49 DPVLLKWWAQYIESTEDMDLAMKYYEEAR---DYLSMVRV---LCFLQ----DFSRAAELAN---ASGDTAAAYHLARQY 115 (1074)
Q Consensus 49 ~~~l~~~~a~~~e~~~~~~~A~~~y~~a~---d~~~~vr~---l~~~~----~~~~a~~i~~---~~~~~~~~~~la~~~ 115 (1074)
++.-+..+|..+...+++++|.++|.++- +......+ |.. + ++++|.+..+ +.++..+.+.+|..|
T Consensus 17 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y 95 (212)
T 3rjv_A 17 DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIR-NPQQADYPQARQLAEKAVEAGSKSGEIVLARVL 95 (212)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 35555566666666666666666666642 22222222 333 4 5666666544 445666666666666
Q ss_pred Hh----cCChHHHHHHHHHhCCh
Q psy14927 116 EN----SGQFDEAIHFYSVAGSC 134 (1074)
Q Consensus 116 ~~----~g~~~~Ai~~y~~a~~~ 134 (1074)
.. .+|+++|+++|.++-..
T Consensus 96 ~~g~g~~~d~~~A~~~~~~A~~~ 118 (212)
T 3rjv_A 96 VNRQAGATDVAHAITLLQDAARD 118 (212)
T ss_dssp TCGGGSSCCHHHHHHHHHHHTSS
T ss_pred HcCCCCccCHHHHHHHHHHHHHc
Confidence 65 66666666666665544
No 246
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.29 E-value=0.0015 Score=68.19 Aligned_cols=125 Identities=15% Similarity=0.199 Sum_probs=68.9
Q ss_pred hhhcCCHHHHHHHHHHcCcccchh-------hhHhh--hcHHHHHHHhhc-----CCChHHHHHHHHHHHhccCHHHHHH
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHV-------PRMLL--ENTDKLEKYIIQ-----SKDPVLLKWWAQYIESTEDMDLAMK 71 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~-------~~~~~--~~~~~~~~~~~~-----~~~~~l~~~~a~~~e~~~~~~~A~~ 71 (1074)
+...|++++|+..|+++-..+..- ..++. ++++.+..+..+ +.++..+..+|..+...|++++|.+
T Consensus 67 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 146 (243)
T 2q7f_A 67 LSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALP 146 (243)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHH
Confidence 456788888888888765443221 11121 345444444433 3455566666666666666666666
Q ss_pred HHHHhhCh--------hhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChHHHHHHHHH
Q psy14927 72 YYEEARDY--------LSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFDEAIHFYSV 130 (1074)
Q Consensus 72 ~y~~a~d~--------~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~~Ai~~y~~ 130 (1074)
+|.++-.. ..+..++...|++++|.+..++ +.+......+|..|...|++++|+++|.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 218 (243)
T 2q7f_A 147 YLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALEMLDK 218 (243)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHHHHHH
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 66654221 2234445556666666555442 23445555666666666666666665544
No 247
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.28 E-value=0.0011 Score=79.09 Aligned_cols=60 Identities=13% Similarity=0.152 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhCCCEEEeCceEEEEEecCCeE-EEEEeeccCCCCceEEEcCEEEEccCCcc
Q psy14927 949 EVAKQFQRILGKQGMQFKLGTKVTGASKSGDNI-TVTIENVKDPTKKEELSCDALLVCVGRRP 1010 (1074)
Q Consensus 949 ~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~~~~i~~D~vi~a~G~~p 1010 (1074)
.+...+.+.+.+.||+++.+++|+++..+++.+ .|.+.+. +|+..++.+|.||.|+|...
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~--dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNT--EGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECS--SSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeC--CCCEEEEEcCEEEECCCcch
Confidence 355667777788999999999999999876654 3555542 24446899999999999753
No 248
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.28 E-value=0.00022 Score=82.02 Aligned_cols=101 Identities=15% Similarity=0.082 Sum_probs=65.6
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccc-----cccch------------hhhhh--------------h--
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKG-----VKLNL------------ETMMG--------------T-- 836 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g-----~~~~~------------~~~~~--------------~-- 836 (1074)
.+|+||||||+|+++|+.|++ +++|+.+... ..+.. ..+.. +
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 459999999999999999999 6788754331 00000 00000 0
Q ss_pred ----------hh-----HHHhhhhhhHHHHhhhC-CeEEEee-eEEEec--CCeE--EEEeCCCCeeEEEcCeEEEccCC
Q psy14927 837 ----------KS-----AAVKALTGGIAHLFKSN-KVTQLNG-HGKITG--PNTV--TVIKSDGSTEEVKTKNILIATGS 895 (1074)
Q Consensus 837 ----------~~-----~~~~~l~~~~~~~l~~~-gV~~~~g-~v~~id--~~~~--~v~~~~G~~~~i~~d~lIIATG~ 895 (1074)
.. -....+...+.+.+.+. ||+++.+ +|+.++ .+.+ .|++.+| .++.+|.||.|+|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g--~~~~ad~vV~AdG~ 164 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDG--RVLRPRVVVGADGI 164 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTS--CEEEEEEEEECCCT
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCC--CEEECCEEEECCCC
Confidence 00 00123334455666666 9999998 577664 3455 7778888 58999999999998
Q ss_pred CC
Q psy14927 896 EV 897 (1074)
Q Consensus 896 ~p 897 (1074)
..
T Consensus 165 ~s 166 (399)
T 2x3n_A 165 AS 166 (399)
T ss_dssp TC
T ss_pred Ch
Confidence 75
No 249
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.28 E-value=0.0018 Score=59.94 Aligned_cols=106 Identities=26% Similarity=0.404 Sum_probs=81.0
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhC-------
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARD------- 78 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d------- 78 (1074)
+...|++++|..+|+++-.. .+.++..+..+|..+...|++++|.++|.++-.
T Consensus 11 ~~~~~~~~~A~~~~~~~~~~--------------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 70 (136)
T 2fo7_A 11 YYKQGDYDEAIEYYQKALEL--------------------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAE 70 (136)
T ss_dssp HHHHTCHHHHHHHHHHHHHH--------------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHcCcHHHHHHHHHHHHHc--------------------CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchH
Confidence 34567888888888776421 134466777889989999999999999988643
Q ss_pred -hhhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 79 -YLSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 79 -~~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
+..+..++...|++++|.+..+. +.+......+|..+...|++++|+++|.++
T Consensus 71 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 129 (136)
T 2fo7_A 71 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKA 129 (136)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 23456668889999999887763 346677889999999999999999988654
No 250
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.28 E-value=0.0013 Score=62.21 Aligned_cols=63 Identities=13% Similarity=0.067 Sum_probs=44.6
Q ss_pred CChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHH
Q psy14927 48 KDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHF 127 (1074)
Q Consensus 48 ~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~ 127 (1074)
+++.+|...|..+...|++++|+++|.++=.. ++.+..+.+.+|..|...|++++|++.
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---------------------~p~~~~a~~~lg~~~~~~~~~~~A~~~ 103 (126)
T 4gco_A 45 ENAILYSNRAACLTKLMEFQRALDDCDTCIRL---------------------DSKFIKGYIRKAACLVAMREWSKAQRA 103 (126)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------------CTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh---------------------hhhhhHHHHHHHHHHHHCCCHHHHHHH
Confidence 34556666666666666666666665543111 456778899999999999999999998
Q ss_pred HHHh
Q psy14927 128 YSVA 131 (1074)
Q Consensus 128 y~~a 131 (1074)
|.++
T Consensus 104 ~~~a 107 (126)
T 4gco_A 104 YEDA 107 (126)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 251
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.27 E-value=0.00031 Score=84.86 Aligned_cols=53 Identities=11% Similarity=0.048 Sum_probs=36.1
Q ss_pred hhhHHHHhhhCCeEEEee-eEEEec--C-CeE-EEEe--CCCCeeEEEcCeEEEccCCCC
Q psy14927 845 TGGIAHLFKSNKVTQLNG-HGKITG--P-NTV-TVIK--SDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 845 ~~~~~~~l~~~gV~~~~g-~v~~id--~-~~~-~v~~--~~G~~~~i~~d~lIIATG~~p 897 (1074)
...+.+.+.+.||+++++ .|+.+. . +.+ .|++ .+|+..++.+|.||+|||+..
T Consensus 253 ~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 253 IDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 344566677789999999 466653 2 322 2333 467444799999999999865
No 252
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.24 E-value=0.00017 Score=86.28 Aligned_cols=45 Identities=18% Similarity=0.212 Sum_probs=35.0
Q ss_pred HHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCC
Q psy14927 958 LGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGR 1008 (1074)
Q Consensus 958 l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~ 1008 (1074)
.+..|+++++++.|++|..+++++.|.+.+ ++++.+|.||++++.
T Consensus 222 ~~~lg~~i~~~~~V~~i~~~~~~v~v~~~~------g~~~~ad~VI~a~p~ 266 (520)
T 1s3e_A 222 MDLLGDRVKLERPVIYIDQTRENVLVETLN------HEMYEAKYVISAIPP 266 (520)
T ss_dssp HHHHGGGEESSCCEEEEECSSSSEEEEETT------SCEEEESEEEECSCG
T ss_pred HHHcCCcEEcCCeeEEEEECCCeEEEEECC------CeEEEeCEEEECCCH
Confidence 344478999999999998776666665443 457999999999875
No 253
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.22 E-value=0.012 Score=67.65 Aligned_cols=29 Identities=17% Similarity=0.023 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhhC
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEARD 78 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~d 78 (1074)
|.-...-|+-+...|+|++|.+.|.++-+
T Consensus 4 p~~~l~~a~~l~~~~~y~eA~~~~~~~l~ 32 (434)
T 4b4t_Q 4 PGSKLEEARRLVNEKQYNEAEQVYLSLLD 32 (434)
T ss_dssp TTHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 44445557778889999999999987543
No 254
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.21 E-value=0.0037 Score=68.14 Aligned_cols=150 Identities=9% Similarity=0.082 Sum_probs=89.4
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhC-------
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARD------- 78 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d------- 78 (1074)
+-..|++++|..+|+++.......+.. ..+ ...+...+.+....+++++|.++|.++=+
T Consensus 85 ~~~~~~y~~a~~~~~~~l~~~~~~~~~--------~~~------~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~ 150 (293)
T 3u3w_A 85 LCKQKRYKEIYNKVWNELKKEEYHPEF--------QQF------LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGID 150 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCCCCHHH--------HHH------HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSC
T ss_pred HHHHhhHHHHHHHHHHHhccccCChHH--------HHH------HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhccccc
Confidence 345677788888777765432111110 000 01122346667777788888888877633
Q ss_pred -------hhhhhhHhhccCCHHHHHHHHHhc--------CCh----HHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHH
Q psy14927 79 -------YLSMVRVLCFLQDFSRAAELANAS--------GDT----AAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVR 139 (1074)
Q Consensus 79 -------~~~~vr~l~~~~~~~~a~~i~~~~--------~~~----~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~ 139 (1074)
+.++..++..+|++++|.+..++. .+. ...+.+|..|.++|++++|+++|. +|++
T Consensus 151 ~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~------~al~ 224 (293)
T 3u3w_A 151 VYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVN------KAIE 224 (293)
T ss_dssp TTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH------HHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH------HHHH
Confidence 234444577778888777765521 222 256799999999999999999965 5688
Q ss_pred HHHHhCchHHHHHHhhhcCchhHHHHHHHHcc-CC-hhHHHHHHHH
Q psy14927 140 LCKEQALDDQLWNLALSAGPSEQIEAATYLET-IE-PDKAVLLYHK 183 (1074)
Q Consensus 140 la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~-~~-~~~A~~ly~k 183 (1074)
++++.+..... ...+...|..+.. ++ +++|...|.+
T Consensus 225 ~~~~~~~~~~~--------~~~~~~lg~~~~~~g~~~~~A~~~~~~ 262 (293)
T 3u3w_A 225 ISCRINSMALI--------GQLYYQRGECLRKLEYEEAEIEDAYKK 262 (293)
T ss_dssp HHHHTTBCTTH--------HHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHcCcHHHH--------HHHHHHHHHHHHHhCCcHHHHHHHHHH
Confidence 88776422111 1223345555554 53 4777776653
No 255
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.20 E-value=0.0075 Score=70.51 Aligned_cols=47 Identities=15% Similarity=0.020 Sum_probs=26.9
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHh---hcCChHHHhhHHHHHHHH
Q psy14927 288 NYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEID---EFGNYEKGLGALNEAKRC 346 (1074)
Q Consensus 288 ~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~~ 346 (1074)
|+.+|...+..|. .+. +. -+..+..+|.. .-.|+.+|+..|.+++..
T Consensus 302 d~~~A~~~~~~Aa-----~g~--~~-----A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 302 DAKAAEAHFEKAV-----GRE--VA-----ADYYLGQIYRRGYLGKVYPQKALDHLLTAARN 351 (452)
T ss_dssp CHHHHHHHHHTTT-----TTC--HH-----HHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHh-----CCC--HH-----HHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh
Confidence 7777777666655 121 11 11222334433 124899999999998873
No 256
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.19 E-value=0.00046 Score=77.14 Aligned_cols=32 Identities=16% Similarity=0.049 Sum_probs=27.8
Q ss_pred CCCCEEEecccCCCCCcHHHHHHHHHHHHHHhh
Q psy14927 1039 VIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1039 s~~~IyAiGD~~~~~~~~~~A~~~G~~aA~~I~ 1071 (1074)
..++|+.+||.+.+. ....|+.+|..+|..|.
T Consensus 293 ~~~rl~laGDa~~g~-gv~~a~~sg~~lA~~l~ 324 (336)
T 1yvv_A 293 ADLGIYVCGDWCLSG-RVEGAWLSGQEAARRLL 324 (336)
T ss_dssp TTTTEEECCGGGTTS-SHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCCC-CHHHHHHHHHHHHHHHH
Confidence 458999999998865 78899999999999876
No 257
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.19 E-value=0.0013 Score=71.98 Aligned_cols=140 Identities=14% Similarity=0.054 Sum_probs=94.2
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhh----
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLS---- 81 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~---- 81 (1074)
+.+.|++++|+.+|+++-..+ ++++..+..+|..+...|++++|..+|.++-....
T Consensus 127 ~~~~g~~~~A~~~~~~al~~~--------------------P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~ 186 (287)
T 3qou_A 127 LMQESNYTDALPLLXDAWQLS--------------------NQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRY 186 (287)
T ss_dssp HHHTTCHHHHHHHHHHHHHHT--------------------TSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHH
T ss_pred HHhCCCHHHHHHHHHHHHHhC--------------------CcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHH
Confidence 445666777777666654322 56688999999999999999999999998743211
Q ss_pred ----hhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHH
Q psy14927 82 ----MVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWN 152 (1074)
Q Consensus 82 ----~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~ 152 (1074)
....+...++.+.|.+..+ .+++..+.+.+|..+...|++++|++.|.++-..
T Consensus 187 ~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~------------------ 248 (287)
T 3qou_A 187 QGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRX------------------ 248 (287)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------------------
T ss_pred HHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhc------------------
Confidence 1111444555555544332 5678899999999999999999999887653211
Q ss_pred Hhhhc-CchhHHHHHHHHcc-CChhHHHHHHHHh
Q psy14927 153 LALSA-GPSEQIEAATYLET-IEPDKAVLLYHKA 184 (1074)
Q Consensus 153 l~~~~-~~~~~~~~A~~~e~-~~~~~A~~ly~ka 184 (1074)
-+.. ........+..|+. ++.+.|+..|.++
T Consensus 249 -~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~a 281 (287)
T 3qou_A 249 -DLTAADGQTRXTFQEILAALGTGDALASXYRRQ 281 (287)
T ss_dssp -CTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred -ccccccchHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 1221 12334456777777 7778888888753
No 258
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.19 E-value=0.0034 Score=71.71 Aligned_cols=105 Identities=12% Similarity=0.183 Sum_probs=70.4
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccC-HHHHHHHHHHhhC------
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTED-MDLAMKYYEEARD------ 78 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~-~~~A~~~y~~a~d------ 78 (1074)
+...|++++|+.+|+++-..+ +++...|...|..+...|+ +++|+++|.++=.
T Consensus 107 ~~~~g~~~~Al~~~~~al~l~--------------------P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~ 166 (382)
T 2h6f_A 107 LQRDERSERAFKLTRDAIELN--------------------AANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNY 166 (382)
T ss_dssp HHHTCCCHHHHHHHHHHHHHC--------------------TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHCCChHHHHHHHHHHHHhC--------------------ccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCH
Confidence 345677777777777665332 4557778888888888886 8888888887533
Q ss_pred --hhhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCChHHHHHHHHH
Q psy14927 79 --YLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQFDEAIHFYSV 130 (1074)
Q Consensus 79 --~~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~ 130 (1074)
|.....+|..+|++++|....+ ++++..+.+.+|..+...|++++|+++|.+
T Consensus 167 ~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~ 225 (382)
T 2h6f_A 167 QVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQ 225 (382)
T ss_dssp HHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 2344455666777777766554 356667777777777777777777776543
No 259
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.18 E-value=0.0059 Score=63.21 Aligned_cols=49 Identities=22% Similarity=0.175 Sum_probs=40.5
Q ss_pred hhHhhccCCHHHHHHHHH---hcCChHHHHHHHHHHHhcC----ChHHHHHHHHHhC
Q psy14927 83 VRVLCFLQDFSRAAELAN---ASGDTAAAYHLARQYENSG----QFDEAIHFYSVAG 132 (1074)
Q Consensus 83 vr~l~~~~~~~~a~~i~~---~~~~~~~~~~la~~~~~~g----~~~~Ai~~y~~a~ 132 (1074)
..+|...+++++|.+..+ +.++..+.+.+|..|.. | ++++|+++|.++-
T Consensus 25 g~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~ 80 (212)
T 3rjv_A 25 ADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIR-NPQQADYPQARQLAEKAV 80 (212)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHH
Confidence 344666788888887766 56888999999999998 7 9999999999883
No 260
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.17 E-value=0.00026 Score=81.83 Aligned_cols=88 Identities=13% Similarity=0.069 Sum_probs=64.6
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEecC
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITGP 869 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id~ 869 (1074)
+|+|||||+.|+..|..+++ ++++..+...... . ...+...+.+.+++.||+++.+ .++.++.
T Consensus 147 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~--------~---~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 215 (408)
T 2gqw_A 147 RLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA--------A---PATLADFVARYHAAQGVDLRFERSVTGSVD 215 (408)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT--------S---CHHHHHHHHHHHHHTTCEEEESCCEEEEET
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc--------c---CHHHHHHHHHHHHHcCcEEEeCCEEEEEEC
Confidence 49999999999999999987 5555544332110 0 1223344667778899999999 6777773
Q ss_pred CeEEEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 870 NTVTVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 870 ~~~~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
. .|++.+| .++.+|.||+|||.+|.
T Consensus 216 -~-~v~~~~g--~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 216 -G-VVLLDDG--TRIAADMVVVGIGVLAN 240 (408)
T ss_dssp -T-EEEETTS--CEEECSEEEECSCEEEC
T ss_pred -C-EEEECCC--CEEEcCEEEECcCCCcc
Confidence 3 6777888 68999999999999874
No 261
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.15 E-value=0.0011 Score=80.13 Aligned_cols=59 Identities=19% Similarity=0.200 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHhCCCEEEeCceEEEEEec-CCeEEEEEeeccCCCCceEEEcCEEEEccCCcc
Q psy14927 949 EVAKQFQRILGKQGMQFKLGTKVTGASKS-GDNITVTIENVKDPTKKEELSCDALLVCVGRRP 1010 (1074)
Q Consensus 949 ~~~~~~~~~l~~~gV~i~~~~~v~~i~~~-~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p 1010 (1074)
.+...+.+.+.+.||+++.+++|+++..+ ++.+.|++.+ +|+..++.+|.||.|+|...
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~---~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRR---GGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEE---TTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEec---CCceEEEEcCEEEECCCCcc
Confidence 35566777778899999999999999864 4557777764 24447899999999999754
No 262
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.13 E-value=0.0021 Score=68.69 Aligned_cols=107 Identities=21% Similarity=0.204 Sum_probs=71.5
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCC---hHHHHHHHHHHHhccCHHHHHHHHHHhhCh--
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKD---PVLLKWWAQYIESTEDMDLAMKYYEEARDY-- 79 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~-- 79 (1074)
.+...|++++|+..|+++-... +.+ +..+.++|..+...|++++|..+|.++=+.
T Consensus 24 ~~~~~g~~~~A~~~~~~~l~~~--------------------p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p 83 (261)
T 3qky_A 24 EFYNQGKYDRAIEYFKAVFTYG--------------------RTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQ 83 (261)
T ss_dssp HHHHTTCHHHHHHHHHHHGGGC--------------------SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHhCCHHHHHHHHHHHHHhC--------------------CCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCC
Confidence 3556788888888888876433 122 567777788888888888888888775432
Q ss_pred ---------hhhhhHhhc--------cCCHHHHHHHHHh-----cCChHHH-----------------HHHHHHHHhcCC
Q psy14927 80 ---------LSMVRVLCF--------LQDFSRAAELANA-----SGDTAAA-----------------YHLARQYENSGQ 120 (1074)
Q Consensus 80 ---------~~~vr~l~~--------~~~~~~a~~i~~~-----~~~~~~~-----------------~~la~~~~~~g~ 120 (1074)
..+..++.. +|++++|.+..++ +++..+. +.+|..|.+.|+
T Consensus 84 ~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~ 163 (261)
T 3qky_A 84 IDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERREL 163 (261)
T ss_dssp TCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 123344555 7777777766552 2332222 778888889999
Q ss_pred hHHHHHHHHHh
Q psy14927 121 FDEAIHFYSVA 131 (1074)
Q Consensus 121 ~~~Ai~~y~~a 131 (1074)
+++|+..|.++
T Consensus 164 ~~~A~~~~~~~ 174 (261)
T 3qky_A 164 YEAAAVTYEAV 174 (261)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99888887653
No 263
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=97.13 E-value=0.014 Score=60.51 Aligned_cols=85 Identities=15% Similarity=0.097 Sum_probs=69.5
Q ss_pred CCChHHHHHHHHHHHhccCHHHHHHHHHHhhChh---------hhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHH
Q psy14927 47 SKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYL---------SMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLA 112 (1074)
Q Consensus 47 ~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~---------~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la 112 (1074)
..+|..+...|..+...|++++|.++|.++=+.. .+..++..+|++++|.+..+. +.+..+...+|
T Consensus 4 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 83 (228)
T 4i17_A 4 TTDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKS 83 (228)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 3568888999999999999999999999865433 355668889999999887663 45566788999
Q ss_pred HHHHhcCChHHHHHHHHHh
Q psy14927 113 RQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 113 ~~~~~~g~~~~Ai~~y~~a 131 (1074)
..|..+|++++|++.|.++
T Consensus 84 ~~~~~~~~~~~A~~~~~~a 102 (228)
T 4i17_A 84 AAYRDMKNNQEYIATLTEG 102 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHH
Confidence 9999999999999887654
No 264
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.11 E-value=0.0065 Score=66.20 Aligned_cols=119 Identities=10% Similarity=0.095 Sum_probs=75.6
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhh-------C
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEAR-------D 78 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~-------d 78 (1074)
+...|++++|+.+|+++-......+.. .. ....+...|.++...|++++|.++|.++= |
T Consensus 85 ~~~~~~y~~A~~~~~~~l~~~~~~~~~----~~----------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 150 (293)
T 2qfc_A 85 LCKQKRYKEIYNKVWNELKKEEYHPEF----QQ----------FLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGID 150 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCCCHHH----HH----------HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSC
T ss_pred HHHhhhHHHHHHHHHHHhccccCChhH----HH----------HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCc
Confidence 446677888887777654322111100 00 01122335777788888999998888763 2
Q ss_pred h-------hhhhhHhhccCCHHHHHHHHHhc-------CC-h----HHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHH
Q psy14927 79 Y-------LSMVRVLCFLQDFSRAAELANAS-------GD-T----AAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVR 139 (1074)
Q Consensus 79 ~-------~~~vr~l~~~~~~~~a~~i~~~~-------~~-~----~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~ 139 (1074)
. .++..+|..+|++++|.+..++. .+ . .+.+.+|..|.++|++++|+++|.+ |++
T Consensus 151 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~k------al~ 224 (293)
T 2qfc_A 151 VYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNK------AIE 224 (293)
T ss_dssp TTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH------HHH
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHH------HHH
Confidence 2 23345577788888887776531 22 1 4677999999999999999999764 566
Q ss_pred HHHHh
Q psy14927 140 LCKEQ 144 (1074)
Q Consensus 140 la~~~ 144 (1074)
++...
T Consensus 225 ~~~~~ 229 (293)
T 2qfc_A 225 ISCRI 229 (293)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 66543
No 265
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.08 E-value=0.0004 Score=79.07 Aligned_cols=85 Identities=16% Similarity=0.099 Sum_probs=63.9
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEecC
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITGP 869 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id~ 869 (1074)
+|+|||||+.|+.+|..+++ ++++..+.... + ..++...+.+.+++.||+++.+ +++.++.
T Consensus 145 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~------------~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~ 211 (367)
T 1xhc_A 145 EAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG-L------------DEELSNMIKDMLEETGVKFFLNSELLEANE 211 (367)
T ss_dssp EEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-C------------CHHHHHHHHHHHHHTTEEEECSCCEEEECS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-C------------CHHHHHHHHHHHHHCCCEEEcCCEEEEEEe
Confidence 48999999999999999988 56655543322 1 1233444667788899999999 6888875
Q ss_pred CeEEEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 870 NTVTVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 870 ~~~~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
. .+++++| . +.+|.||+|||.+|.
T Consensus 212 ~--~v~~~~g--~-i~~D~vi~a~G~~p~ 235 (367)
T 1xhc_A 212 E--GVLTNSG--F-IEGKVKICAIGIVPN 235 (367)
T ss_dssp S--EEEETTE--E-EECSCEEEECCEEEC
T ss_pred e--EEEECCC--E-EEcCEEEECcCCCcC
Confidence 4 3566777 4 999999999999874
No 266
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.07 E-value=0.0022 Score=72.98 Aligned_cols=57 Identities=14% Similarity=0.100 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEE-EEEeeccCCCCceEEEcCEEEEccCCcc
Q psy14927 947 DGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNIT-VTIENVKDPTKKEELSCDALLVCVGRRP 1010 (1074)
Q Consensus 947 ~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~-v~~~~~~~~g~~~~i~~D~vi~a~G~~p 1010 (1074)
+..+...+.+.+++.|++++.++.|+++..+++.+. |++.+ + ++.+|.||+|+|...
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~------g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNK------G-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETT------E-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECC------c-EEECCEEEECcchhH
Confidence 355677788888899999999999999987666554 54322 3 799999999999754
No 267
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.07 E-value=0.002 Score=77.64 Aligned_cols=103 Identities=22% Similarity=0.162 Sum_probs=67.9
Q ss_pred cCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh--------h
Q psy14927 9 NGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY--------L 80 (1074)
Q Consensus 9 ~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~--------~ 80 (1074)
.|++++|+.+|+++-..+ ++++..+..+|..+...|++++|.++|.++-.. .
T Consensus 2 ~g~~~~A~~~~~~al~~~--------------------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 61 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHR--------------------PQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVA 61 (568)
T ss_dssp ---------------------------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHH
T ss_pred CccHHHHHHHHHHHHHhC--------------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 478899999999886433 345778888899999999999999999986443 3
Q ss_pred hhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 81 SMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 81 ~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
.+..+|..+|++++|.+..+ .+.+..+.+.+|..|.+.|++++|+++|.++
T Consensus 62 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 117 (568)
T 2vsy_A 62 RLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRA 117 (568)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 45666888899999988766 3567778889999999999999999887653
No 268
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.07 E-value=0.0057 Score=60.21 Aligned_cols=97 Identities=18% Similarity=0.143 Sum_probs=71.2
Q ss_pred hcHHHHHHHhhc-----CCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh--------hhhhhHhhccCCHHHHHHHHHh
Q psy14927 35 ENTDKLEKYIIQ-----SKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY--------LSMVRVLCFLQDFSRAAELANA 101 (1074)
Q Consensus 35 ~~~~~~~~~~~~-----~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~--------~~~vr~l~~~~~~~~a~~i~~~ 101 (1074)
+++.++..+..+ ++++..+..+|..+...|++++|.++|.++-.. ..+..++...|++++|.+..+.
T Consensus 22 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 101 (186)
T 3as5_A 22 GRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIK 101 (186)
T ss_dssp TCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 456666666555 356778888899999999999999998886432 2345567778888888887663
Q ss_pred -----cCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 102 -----SGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 102 -----~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
+.+......+|..+...|++++|+++|.++
T Consensus 102 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 136 (186)
T 3as5_A 102 VAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIA 136 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 356667778888888888888888876543
No 269
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.05 E-value=0.00075 Score=81.57 Aligned_cols=54 Identities=11% Similarity=-0.050 Sum_probs=36.4
Q ss_pred hhhhHHHHhhhCCeEEEee-eEEEec--C-CeE-EEEe--CCCCeeEEEcCeEEEccCCCC
Q psy14927 844 LTGGIAHLFKSNKVTQLNG-HGKITG--P-NTV-TVIK--SDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 844 l~~~~~~~l~~~gV~~~~g-~v~~id--~-~~~-~v~~--~~G~~~~i~~d~lIIATG~~p 897 (1074)
+...+.+.+.+.||+++++ .|+.+. . +.+ .|.+ .+|+..++.+|.||+|||+.+
T Consensus 257 l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 257 VAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 3344666677789999999 466652 2 222 2333 366445799999999999865
No 270
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.04 E-value=0.00043 Score=77.84 Aligned_cols=34 Identities=12% Similarity=0.100 Sum_probs=29.5
Q ss_pred CCCCCEEEecccCCCCCcHHHHHHHHHHHHHHhhC
Q psy14927 1038 TVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 1038 ts~~~IyAiGD~~~~~~~~~~A~~~G~~aA~~I~~ 1072 (1074)
...|++|.+||...+. ....|+.+|..+|..|+.
T Consensus 307 ~~~~~l~laGd~~~g~-~v~~ai~sg~~aa~~i~~ 340 (342)
T 3qj4_A 307 HHKPFLACGGDGFTQS-NFDGCITSALCVLEALKN 340 (342)
T ss_dssp ETTTEEEECSGGGSCS-SHHHHHHHHHHHHHHHTT
T ss_pred cCCccEEEEccccCCC-CccHHHHHHHHHHHHHHh
Confidence 3568999999998776 789999999999999875
No 271
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.03 E-value=0.00039 Score=81.57 Aligned_cols=103 Identities=15% Similarity=0.051 Sum_probs=63.2
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccc-------cccc---hhhh---------h-----------hh---
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKG-------VKLN---LETM---------M-----------GT--- 836 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g-------~~~~---~~~~---------~-----------~~--- 836 (1074)
.+|+||||||+|+++|+.|++ +++|+.+... ..+. +..+ . +.
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 459999999999999999998 6888765321 1000 0000 0 00
Q ss_pred --------hhHHHhhhhhhHHHHhhhCCeEEEee-eEEEec--CCeEE-EEeC---CCCeeEEEcCeEEEccCCCC
Q psy14927 837 --------KSAAVKALTGGIAHLFKSNKVTQLNG-HGKITG--PNTVT-VIKS---DGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 837 --------~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id--~~~~~-v~~~---~G~~~~i~~d~lIIATG~~p 897 (1074)
..-....+...+.+.+.+.||+++.+ +|+.+. .+.+. |++. +|+..++.+|.||.|+|...
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 00000123334555666789999999 566654 33432 4443 66444899999999999865
No 272
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.02 E-value=0.0025 Score=62.46 Aligned_cols=110 Identities=11% Similarity=0.083 Sum_probs=81.6
Q ss_pred cCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhC--------hh
Q psy14927 9 NGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARD--------YL 80 (1074)
Q Consensus 9 ~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d--------~~ 80 (1074)
..++.+++.-+.+.|..-.++..+ + ++++..+..+|..+...|++++|+++|.++=. |.
T Consensus 8 ~~~~~~~l~~~~~~~~~l~~al~l---~----------p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~ 74 (151)
T 3gyz_A 8 NESISTAVIDAINSGATLKDINAI---P----------DDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIM 74 (151)
T ss_dssp -CHHHHHHHHHHHTSCCTGGGCCS---C----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCCHHHHhCC---C----------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 344556666666666443333332 1 22355677789999999999999999998543 34
Q ss_pred hhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 81 SMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 81 ~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
++..+|..+|++++|.+..+ .+.+..+.+.+|..|...|++++|++.|.++
T Consensus 75 ~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~a 130 (151)
T 3gyz_A 75 GLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELV 130 (151)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 56677889999999988765 4678899999999999999999999987653
No 273
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.02 E-value=0.0016 Score=74.32 Aligned_cols=71 Identities=15% Similarity=0.235 Sum_probs=52.9
Q ss_pred CcEEEEecCCccCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCc
Q psy14927 930 AEVTAIEFMNAIGGMGIDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRR 1009 (1074)
Q Consensus 930 ~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~ 1009 (1074)
..+.++.+..... .+..+...+.+.+++.|++++.++.|+++..+++++.|.+.+ .++.+|.||+|+|..
T Consensus 135 ~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~-------g~~~a~~vV~A~G~~ 204 (389)
T 2gf3_A 135 NYNAIFEPNSGVL---FSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETAN-------GSYTADKLIVSMGAW 204 (389)
T ss_dssp TEEEEEETTCEEE---EHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETT-------EEEEEEEEEECCGGG
T ss_pred CceEEEeCCCcEE---eHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCC-------CEEEeCEEEEecCcc
Confidence 4566776655443 135677788888999999999999999998866665554321 269999999999975
Q ss_pred c
Q psy14927 1010 P 1010 (1074)
Q Consensus 1010 p 1010 (1074)
+
T Consensus 205 ~ 205 (389)
T 2gf3_A 205 N 205 (389)
T ss_dssp H
T ss_pred H
Confidence 4
No 274
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.00 E-value=0.0004 Score=80.30 Aligned_cols=90 Identities=16% Similarity=0.101 Sum_probs=64.5
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEecC
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITGP 869 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id~ 869 (1074)
+|+|||||+.|+.+|..+++ ++++..+.... . .....+...+.+.+++.||+|+++ .++.++.
T Consensus 145 ~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~---------~--~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 213 (410)
T 3ef6_A 145 RLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV---------R--VLGRRIGAWLRGLLTELGVQVELGTGVVGFSG 213 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH---------H--HHCHHHHHHHHHHHHHHTCEEECSCCEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch---------h--hcCHHHHHHHHHHHHHCCCEEEeCCEEEEEec
Confidence 49999999999999999988 44444332210 0 011334445667778889999998 5777765
Q ss_pred C--eEEEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 870 N--TVTVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 870 ~--~~~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
+ ...|.+++| .++.+|.||+|||.+|.
T Consensus 214 ~~~~~~v~~~dg--~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 214 EGQLEQVMASDG--RSFVADSALICVGAEPA 242 (410)
T ss_dssp SSSCCEEEETTS--CEEECSEEEECSCEEEC
T ss_pred cCcEEEEEECCC--CEEEcCEEEEeeCCeec
Confidence 3 235778888 68999999999999874
No 275
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.00 E-value=0.005 Score=63.02 Aligned_cols=105 Identities=14% Similarity=0.175 Sum_probs=75.8
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhC-------
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARD------- 78 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d------- 78 (1074)
+...|++++|+..|+++- + .++..+..+|..+...|++++|.++|.++-.
T Consensus 16 ~~~~~~~~~A~~~~~~a~--~---------------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 72 (213)
T 1hh8_A 16 AADKKDWKGALDAFSAVQ--D---------------------PHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAV 72 (213)
T ss_dssp HHHTTCHHHHHHHHHTSS--S---------------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHhCCHHHHHHHHHHHc--C---------------------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchH
Confidence 446778888888887773 1 1366778888888888888888888887632
Q ss_pred -hhhhhhHhhccCCHHHHHHHHHh-----cCCh----------------HHHHHHHHHHHhcCChHHHHHHHHHhCC
Q psy14927 79 -YLSMVRVLCFLQDFSRAAELANA-----SGDT----------------AAAYHLARQYENSGQFDEAIHFYSVAGS 133 (1074)
Q Consensus 79 -~~~~vr~l~~~~~~~~a~~i~~~-----~~~~----------------~~~~~la~~~~~~g~~~~Ai~~y~~a~~ 133 (1074)
+..+..++..+|++++|.+..+. +++. .+.+.+|..|...|++++|+++|.++-.
T Consensus 73 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 149 (213)
T 1hh8_A 73 AYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATS 149 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 23455667778888888776652 2222 6778999999999999999988766433
No 276
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=96.99 E-value=0.014 Score=69.54 Aligned_cols=194 Identities=13% Similarity=0.124 Sum_probs=106.0
Q ss_pred cCCChHHHHHHHHHHHh-------ccCHH-------HHHHHHHHhhC-h--------hhhhhHhhccCCHHHHHHHHHh-
Q psy14927 46 QSKDPVLLKWWAQYIES-------TEDMD-------LAMKYYEEARD-Y--------LSMVRVLCFLQDFSRAAELANA- 101 (1074)
Q Consensus 46 ~~~~~~l~~~~a~~~e~-------~~~~~-------~A~~~y~~a~d-~--------~~~vr~l~~~~~~~~a~~i~~~- 101 (1074)
.+.++.+|..||.+++. .|+++ +|..+|.+|=. . ...+.++...|++++|.++.+.
T Consensus 268 ~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~a 347 (530)
T 2ooe_A 268 LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRL 347 (530)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 36789999999999986 78877 88888888743 1 1223344555666666655442
Q ss_pred ----cCCh-HHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHccCChhH
Q psy14927 102 ----SGDT-AAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLETIEPDK 176 (1074)
Q Consensus 102 ----~~~~-~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~~~~~~ 176 (1074)
+.+. ......++++.+.|++++|++.|.++-... ......+. ..
T Consensus 348 l~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~--------------------~~~~~~~~-----------~~ 396 (530)
T 2ooe_A 348 LAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDA--------------------RTRHHVYV-----------TA 396 (530)
T ss_dssp HHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT--------------------TCCTHHHH-----------HH
T ss_pred hCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhcc--------------------CCchHHHH-----------HH
Confidence 1222 234455555555555655555554432100 00011111 11
Q ss_pred HHHHHHHhCChHHHHHHHHhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcCCCCCChhHHH
Q psy14927 177 AVLLYHKAGALHKALDLAFKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSSDWKSQPELLK 256 (1074)
Q Consensus 177 A~~ly~kaG~~~kAl~l~~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~~~~~~~~~~~ 256 (1074)
|...|...|++.+|..++.+. ++ ..-.+.++|...++++..+ +++ .
T Consensus 397 a~~~~~~~~~~~~A~~~~e~a-------------l~---------------~~p~~~~~~~~~~~~~~~~---g~~---~ 442 (530)
T 2ooe_A 397 ALMEYYCSKDKSVAFKIFELG-------------LK---------------KYGDIPEYVLAYIDYLSHL---NED---N 442 (530)
T ss_dssp HHHHHHHTCCHHHHHHHHHHH-------------HH---------------HHTTCHHHHHHHHHHHTTT---TCH---H
T ss_pred HHHHHHHcCChhHHHHHHHHH-------------HH---------------HCCCCHHHHHHHHHHHHhC---CCH---h
Confidence 112233344555554444331 00 0113356677777776655 333 3
Q ss_pred HHHHHHHccC-----CHHHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHh
Q psy14927 257 SIISFYSKGK-----APHLLANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLLK 305 (1074)
Q Consensus 257 ~i~~~Y~k~~-----~~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~ 305 (1074)
.+..+|.++- ..+....++....+.| ..+||++.+..++..+.+.+.+
T Consensus 443 ~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e-~~~G~~~~~~~~~~r~~~~~p~ 495 (530)
T 2ooe_A 443 NTRVLFERVLTSGSLPPEKSGEIWARFLAFE-SNIGDLASILKVEKRRFTAFRE 495 (530)
T ss_dssp HHHHHHHHHHHSCCSCGGGCHHHHHHHHHHH-HHSSCHHHHHHHHHHHHHHTHH
T ss_pred hHHHHHHHHHhccCCCHHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHCch
Confidence 3333443331 1223445666667778 8899999999999998888864
No 277
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=96.99 E-value=0.001 Score=75.89 Aligned_cols=57 Identities=12% Similarity=0.241 Sum_probs=42.1
Q ss_pred HHHHHHHHHHhCCCEEEeCceEEEEEecCCeEE-EEEeeccCCCCceEEEcCEEEEccCCc
Q psy14927 950 VAKQFQRILGKQGMQFKLGTKVTGASKSGDNIT-VTIENVKDPTKKEELSCDALLVCVGRR 1009 (1074)
Q Consensus 950 ~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~-v~~~~~~~~g~~~~i~~D~vi~a~G~~ 1009 (1074)
+...+.+...+.|++++.++.+..+..+++.+. +.... +++..++.+|.||-|.|..
T Consensus 104 ~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~---~~~~~~~~a~~vIgAdG~~ 161 (397)
T 3oz2_A 104 FDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRH---NNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEE---TTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecc---cccceEEEEeEEEeCCccc
Confidence 344556667788999999999999887766643 33333 3556789999999999854
No 278
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.99 E-value=0.0004 Score=80.15 Aligned_cols=46 Identities=20% Similarity=0.201 Sum_probs=34.3
Q ss_pred HHHHhhhCCeEEEee-eEEEec--CCeEEEEeCCCCeeEEEcCeEEEccCCCC
Q psy14927 848 IAHLFKSNKVTQLNG-HGKITG--PNTVTVIKSDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 848 ~~~~l~~~gV~~~~g-~v~~id--~~~~~v~~~~G~~~~i~~d~lIIATG~~p 897 (1074)
+.+.+.. ++++++ +|+.++ .+.+.|++.+| .++.+|.||.|+|...
T Consensus 133 L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g--~~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 133 MLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDG--SSASGDLLIAADGSHS 181 (407)
T ss_dssp HHHHHCG--GGEEESCCEEEEEEETTEEEEEETTS--CEEEESEEEECCCTTC
T ss_pred HHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCC--CEEeeCEEEECCCcCh
Confidence 3444443 788888 466654 56778888888 5899999999999875
No 279
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.96 E-value=0.00061 Score=78.91 Aligned_cols=90 Identities=14% Similarity=0.103 Sum_probs=64.3
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEecC
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITGP 869 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id~ 869 (1074)
+|+|||||+.|+.+|..+++ ++++..+...... ....+...+.+.+++.||+++.+ .++.+..
T Consensus 154 ~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~-----------~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 222 (415)
T 3lxd_A 154 NAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV-----------AGEALSEFYQAEHRAHGVDLRTGAAMDCIEG 222 (415)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------SCHHHHHHHHHHHHHTTCEEEETCCEEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh-----------cCHHHHHHHHHHHHhCCCEEEECCEEEEEEe
Confidence 38999999999999999988 4444433321110 01333444667778899999998 5776654
Q ss_pred C--e-EEEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 870 N--T-VTVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 870 ~--~-~~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
+ . ..|.+++| .++.+|.||+|||.+|.
T Consensus 223 ~~~~v~~v~l~dG--~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 223 DGTKVTGVRMQDG--SVIPADIVIVGIGIVPC 252 (415)
T ss_dssp SSSBEEEEEESSS--CEEECSEEEECSCCEES
T ss_pred cCCcEEEEEeCCC--CEEEcCEEEECCCCccC
Confidence 2 3 35778888 68999999999999874
No 280
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=96.95 E-value=0.00014 Score=88.63 Aligned_cols=64 Identities=11% Similarity=0.109 Sum_probs=48.0
Q ss_pred HhCCCEEEeCceEEEEEecCC--e-EEEEEeeccCCCCceEEEcCEEEEccCCcccCCccCccccCcc
Q psy14927 959 GKQGMQFKLGTKVTGASKSGD--N-ITVTIENVKDPTKKEELSCDALLVCVGRRPYTHNLGLEEIGIE 1023 (1074)
Q Consensus 959 ~~~gV~i~~~~~v~~i~~~~~--~-~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~l~~~gl~ 1023 (1074)
++.||+|++++.|++|..+++ . ..|++.+.. +|+..++.+|.||+|+|..|++.++.+...|..
T Consensus 271 ~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~-~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~ 337 (623)
T 3pl8_A 271 PEERFNLFPAVACERVVRNALNSEIESLHIHDLI-SGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQL 337 (623)
T ss_dssp EEEEEEEECSEEEEEEEECTTSSCEEEEEEEETT-TCCEEEECEEEEEECSCTTHHHHHHHTTTSSCC
T ss_pred cCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcC-CCcEEEEECCEEEEcCCCcCCHHHHHhcCCCcc
Confidence 345899999999999987542 2 557766532 466678999999999999999987655555544
No 281
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.91 E-value=0.00043 Score=78.99 Aligned_cols=50 Identities=10% Similarity=0.060 Sum_probs=36.8
Q ss_pred hhhHHHHhhhCCeEEEee-eEEEec--CCeEEEEeCCCCeeEEEcCeEEEccCCCC
Q psy14927 845 TGGIAHLFKSNKVTQLNG-HGKITG--PNTVTVIKSDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 845 ~~~~~~~l~~~gV~~~~g-~v~~id--~~~~~v~~~~G~~~~i~~d~lIIATG~~p 897 (1074)
...+.+.+.+.|++++.+ .|+.+. .+.+.|.+.+| ++.+|.||+|||...
T Consensus 167 ~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g---~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 167 CKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG---DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE---EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc---eEEcCEEEECCChhH
Confidence 344566677789999998 566664 34456666665 799999999999864
No 282
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.91 E-value=0.0024 Score=79.13 Aligned_cols=106 Identities=10% Similarity=0.042 Sum_probs=87.0
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhC-------
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARD------- 78 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d------- 78 (1074)
+.++|++++|+..|+++-..+ ++++..+..+|..+...|++++|+++|.+|=.
T Consensus 53 l~~~g~~~eA~~~~~~Al~l~--------------------P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~ 112 (723)
T 4gyw_A 53 LQQQGKLQEALMHYKEAIRIS--------------------PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFAD 112 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHC--------------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHcCCHHHHHHHHHHHHHhC--------------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 567788888888888875332 45677889999999999999999999998532
Q ss_pred -hhhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 79 -YLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 79 -~~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
+.++..+|..+|++++|.+..+ ++++..+...+|..+..+|++++|++.|.++
T Consensus 113 a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~~~~ka 171 (723)
T 4gyw_A 113 AHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKL 171 (723)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHHHHHHHH
Confidence 3566777999999999988766 3577888999999999999999999987553
No 283
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=96.90 E-value=0.0057 Score=57.63 Aligned_cols=93 Identities=12% Similarity=0.157 Sum_probs=63.4
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhh
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVR 84 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr 84 (1074)
.+..+|+|++|+..|+++-..+ ++++..|..+|..+...|+|++|+++|.++=....
T Consensus 17 ~~~~~~~~~~A~~~y~~Al~~~--------------------p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~--- 73 (127)
T 4gcn_A 17 AAYKQKDFEKAHVHYDKAIELD--------------------PSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGR--- 73 (127)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC--------------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH---
T ss_pred HHHHcCCHHHHHHHHHHHHHhC--------------------CCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCc---
Confidence 3556788888888888775322 34577788888888888888888888866532211
Q ss_pred HhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 85 VLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 85 ~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
.....+.. -..+.+.+|..+...|++++|+++|.++
T Consensus 74 --~~~~~~~~---------~a~~~~~lg~~~~~~~~~~~A~~~~~ka 109 (127)
T 4gcn_A 74 --ETRADYKL---------IAKAMSRAGNAFQKQNDLSLAVQWFHRS 109 (127)
T ss_dssp --HTTCCHHH---------HHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred --ccchhhHH---------HHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 00011100 0134668999999999999999998764
No 284
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=96.90 E-value=0.003 Score=61.45 Aligned_cols=80 Identities=14% Similarity=0.050 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHhhC--------hhhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhc
Q psy14927 52 LLKWWAQYIESTEDMDLAMKYYEEARD--------YLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENS 118 (1074)
Q Consensus 52 l~~~~a~~~e~~~~~~~A~~~y~~a~d--------~~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~ 118 (1074)
.+..+|..+...|++++|+.+|.++=. |..+..++..+|++++|.+..+ .+.+..+.+.+|..|...
T Consensus 23 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~ 102 (148)
T 2vgx_A 23 QLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQX 102 (148)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHc
Confidence 334445555555555555555554311 1223334455555555554433 356788899999999999
Q ss_pred CChHHHHHHHHHh
Q psy14927 119 GQFDEAIHFYSVA 131 (1074)
Q Consensus 119 g~~~~Ai~~y~~a 131 (1074)
|++++|++.|.++
T Consensus 103 g~~~~A~~~~~~a 115 (148)
T 2vgx_A 103 GELAEAESGLFLA 115 (148)
T ss_dssp TCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 9999999987654
No 285
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=96.89 E-value=0.0011 Score=64.58 Aligned_cols=102 Identities=13% Similarity=0.147 Sum_probs=59.8
Q ss_pred hhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhC--------
Q psy14927 7 MKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARD-------- 78 (1074)
Q Consensus 7 ~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d-------- 78 (1074)
.++|++++|+..|+++-..+.+- +..+-.+|+.+...|+|++|.++|.++=.
T Consensus 8 ~~~~~~e~ai~~~~~a~~~~p~~--------------------~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a 67 (150)
T 4ga2_A 8 RSKADVERYIASVQGSTPSPRQK--------------------SIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKA 67 (150)
T ss_dssp CCHHHHHHHHHHHHHHSCSHHHH--------------------HTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHcChHHHHHHHHHHhcccCccc--------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 45688999999999988665222 12223334444444444444444444311
Q ss_pred hhhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCChHHHHHHH
Q psy14927 79 YLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQFDEAIHFY 128 (1074)
Q Consensus 79 ~~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~~Ai~~y 128 (1074)
|..+..++..+|++++|....+ .+.+..+.+.+|..|.+.|++++|++.|
T Consensus 68 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~ 122 (150)
T 4ga2_A 68 HRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYW 122 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHH
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHH
Confidence 1222333444444444444332 3567788889999999999988877765
No 286
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.88 E-value=0.00058 Score=78.77 Aligned_cols=90 Identities=9% Similarity=0.083 Sum_probs=64.2
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEecC
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITGP 869 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id~ 869 (1074)
+|+|||||+.|+.+|..+++ ++++..+...... ....+...+.+.+++.||+++.+ .++.+..
T Consensus 144 ~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~-----------~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 212 (404)
T 3fg2_P 144 HVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV-----------VTPEISSYFHDRHSGAGIRMHYGVRATEIAA 212 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT-----------SCHHHHHHHHHHHHHTTCEEECSCCEEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc-----------cCHHHHHHHHHHHHhCCcEEEECCEEEEEEe
Confidence 49999999999999999987 4444433321110 01233444667788899999999 5776653
Q ss_pred C--e-EEEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 870 N--T-VTVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 870 ~--~-~~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
+ . ..|.+++| .++.+|.||+|||.+|.
T Consensus 213 ~~~~v~~V~~~dG--~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 213 EGDRVTGVVLSDG--NTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp ETTEEEEEEETTS--CEEECSEEEECCCEEEC
T ss_pred cCCcEEEEEeCCC--CEEEcCEEEECcCCccC
Confidence 2 3 35778888 68999999999999874
No 287
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=96.88 E-value=0.044 Score=59.49 Aligned_cols=38 Identities=11% Similarity=0.023 Sum_probs=30.5
Q ss_pred HHHHHHHHHhHHHHhhcCHHHH-HHHHHHHHHHHHhcCCC
Q psy14927 271 LANFYVSCAQVEIDEFGNYEKG-LGALNEAKRCLLKHNDS 309 (1074)
Q Consensus 271 aa~~~~~~a~~ei~e~~~y~~a-~~~l~~a~~~l~~~~~~ 309 (1074)
.+.+|...+... ...|+|++| ...+..|+......+..
T Consensus 235 ~~~~~~~lg~~y-~~~g~~~~Ai~~~~~~Al~~~~~~~~~ 273 (293)
T 2qfc_A 235 IGQLYYQRGECL-RKLEYEEAEIEDAYKKASFFFDILEMH 273 (293)
T ss_dssp HHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHH-HHcCCcHHHHHHHHHHHHHHHHHhCcH
Confidence 467777888887 888999999 88899998888776653
No 288
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=96.86 E-value=0.001 Score=77.16 Aligned_cols=54 Identities=20% Similarity=0.238 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCC
Q psy14927 947 DGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGR 1008 (1074)
Q Consensus 947 ~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~ 1008 (1074)
...+.+.+.+.+++.|++|++++.|++|..+++++ |. .+ +.++.+|.||+|+|.
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V~-~~------g~~~~ad~Vv~a~~~ 241 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEEKKV-YT-RD------NEEYSFDVAISNVGV 241 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-EE-TT------CCEEECSEEEECSCH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-EE-eC------CcEEEeCEEEECCCH
Confidence 46678888899999999999999999999876666 42 22 357999999999875
No 289
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.86 E-value=0.00083 Score=83.01 Aligned_cols=48 Identities=6% Similarity=0.097 Sum_probs=36.8
Q ss_pred HHHHhhhCCeEEEee-eEEEec--CCeEEEEeCCCCeeEEEcCeEEEccCCCC
Q psy14927 848 IAHLFKSNKVTQLNG-HGKITG--PNTVTVIKSDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 848 ~~~~l~~~gV~~~~g-~v~~id--~~~~~v~~~~G~~~~i~~d~lIIATG~~p 897 (1074)
+.+.+.+.||+++.+ +|+.+. .+.+.|.+.+| .++.+|.||+|||...
T Consensus 423 L~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G--~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 423 VLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGD--QQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTS--CEEEESEEEECCGGGG
T ss_pred HHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCC--CEEECCEEEECCCcch
Confidence 445556789999998 577664 45677777776 4799999999999864
No 290
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.86 E-value=0.001 Score=78.89 Aligned_cols=104 Identities=9% Similarity=-0.020 Sum_probs=65.5
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhcccccc-----ccc------------hhhhh-----------------
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGV-----KLN------------LETMM----------------- 834 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~-----~~~------------~~~~~----------------- 834 (1074)
+.+|+||||||+|+++|+.|++ +++|+.+..+. .+. +..+.
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 90 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPIDF 90 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceeccc
Confidence 4459999999999999999999 67776543221 000 00000
Q ss_pred ---hhhhH-----HHhhhhhhHHHHhhhCCeEEEee-eEEEe--cCCeEEEEeCCCC-eeEEEcCeEEEccCCCC
Q psy14927 835 ---GTKSA-----AVKALTGGIAHLFKSNKVTQLNG-HGKIT--GPNTVTVIKSDGS-TEEVKTKNILIATGSEV 897 (1074)
Q Consensus 835 ---~~~~~-----~~~~l~~~~~~~l~~~gV~~~~g-~v~~i--d~~~~~v~~~~G~-~~~i~~d~lIIATG~~p 897 (1074)
..... ....+...+.+.+...|++++.+ +++.+ +.+.++|++.+|. ..++++|+||.|.|.+.
T Consensus 91 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 91 GVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp GGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred ccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 00000 01223334556666779999998 56665 3556777776552 24799999999999975
No 291
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.86 E-value=0.0011 Score=78.65 Aligned_cols=104 Identities=11% Similarity=0.050 Sum_probs=65.9
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccc-----cch------------hhhh---------------hh
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVK-----LNL------------ETMM---------------GT 836 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~-----~~~------------~~~~---------------~~ 836 (1074)
..+|+||||||+|+++|+.|++ +++|+.+..... +.. ..+. ..
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 91 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDF 91 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceeccc
Confidence 4459999999999999999999 677765432210 000 0000 00
Q ss_pred ----------hhHHHhhhhhhHHHHhhhCCeEEEee-eEEEe--cCCeEEEEeCCCC-eeEEEcCeEEEccCCCC
Q psy14927 837 ----------KSAAVKALTGGIAHLFKSNKVTQLNG-HGKIT--GPNTVTVIKSDGS-TEEVKTKNILIATGSEV 897 (1074)
Q Consensus 837 ----------~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~i--d~~~~~v~~~~G~-~~~i~~d~lIIATG~~p 897 (1074)
..-....+...+.+.+...|++++.+ +++.+ +.+.++|++.+|. ..++++|+||.|.|.+.
T Consensus 92 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 92 GVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp GGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred ccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 00001223334556666779999999 56665 3456777776652 34799999999999975
No 292
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=96.83 E-value=0.0038 Score=59.91 Aligned_cols=47 Identities=17% Similarity=0.092 Sum_probs=33.2
Q ss_pred HhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 85 VLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 85 ~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
++..+|++++|....+ .+.+....+.+|..|...|++++|++.|.++
T Consensus 61 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 112 (142)
T 2xcb_A 61 CRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSA 112 (142)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3444444444443332 3567788899999999999999999987654
No 293
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.81 E-value=0.00089 Score=75.99 Aligned_cols=49 Identities=24% Similarity=0.268 Sum_probs=37.1
Q ss_pred hhHHHHhhhCCeEEEee-eEEEec--CCeEEEEeCCCCeeEEEcCeEEEccCCCC
Q psy14927 846 GGIAHLFKSNKVTQLNG-HGKITG--PNTVTVIKSDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 846 ~~~~~~l~~~gV~~~~g-~v~~id--~~~~~v~~~~G~~~~i~~d~lIIATG~~p 897 (1074)
..+.+.+.+.|++++.+ +|+.+. .+.+.|.+.+| ++.+|.||+|||+..
T Consensus 153 ~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g---~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 153 KTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG---EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC---EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC---eEEcCEEEEcCCccH
Confidence 33556667789999998 677764 34567777777 599999999999864
No 294
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.81 E-value=0.00095 Score=72.92 Aligned_cols=86 Identities=10% Similarity=0.063 Sum_probs=61.8
Q ss_pred hhhhhhccccchHHHHHHHhhhhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEecCCeEEE
Q psy14927 795 QVVLNTLGNCAAVQANYHLATKLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITGPNTVTV 874 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id~~~~~v 874 (1074)
++|+|||||+.|+..|..+++. + .+.+- .... ..+...+.+.+.+.||+++...++.++.+. .|
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~--------g-~v~~v--~~~~----~~~~~~~~~~l~~~gv~i~~~~v~~i~~~~-~v 205 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDW--------G-ETTFF--TNGI----VEPDADQHALLAARGVRVETTRIREIAGHA-DV 205 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGT--------S-EEEEE--CTTT----CCCCHHHHHHHHHTTCEEECSCEEEEETTE-EE
T ss_pred CEEEEEecCccHHHHHHHhhhc--------C-cEEEE--ECCC----CCCCHHHHHHHHHCCcEEEcceeeeeecCC-eE
Confidence 3499999999999999999871 1 11110 0000 022334567778889999976788888765 67
Q ss_pred EeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 875 IKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 875 ~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
.+.+| .++.+|.||+|||..|.
T Consensus 206 ~~~~g--~~~~~D~vi~a~G~~p~ 227 (297)
T 3fbs_A 206 VLADG--RSIALAGLFTQPKLRIT 227 (297)
T ss_dssp EETTS--CEEEESEEEECCEEECC
T ss_pred EeCCC--CEEEEEEEEEccCcccC
Confidence 78888 68999999999999874
No 295
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.81 E-value=0.00094 Score=79.18 Aligned_cols=90 Identities=16% Similarity=0.183 Sum_probs=62.4
Q ss_pred hhhhhccccchHHHHHHHhhh---------hhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEE
Q psy14927 796 VVLNTLGNCAAVQANYHLATK---------LFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGK 865 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~~---------l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~ 865 (1074)
+|+|||||+.|+..|..+++. +++..+.. +.... ...+...+.+.+++.||+++.+ .++
T Consensus 182 ~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~-----~~~~l------~~~~~~~~~~~l~~~GV~v~~~~~V~ 250 (493)
T 1m6i_A 182 SITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGN-----MGKIL------PEYLSNWTMEKVRREGVKVMPNAIVQ 250 (493)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSST-----TTTTS------CHHHHHHHHHHHHTTTCEEECSCCEE
T ss_pred eEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccc-----ccccC------CHHHHHHHHHHHHhcCCEEEeCCEEE
Confidence 499999999999999998761 11111100 00000 1233444667788899999999 577
Q ss_pred Eec--CCeEEEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 866 ITG--PNTVTVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 866 ~id--~~~~~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
.++ .+.+.|++.+| .++.+|.||+|+|.+|.
T Consensus 251 ~i~~~~~~~~v~l~dG--~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 251 SVGVSSGKLLIKLKDG--RKVETDHIVAAVGLEPN 283 (493)
T ss_dssp EEEEETTEEEEEETTS--CEEEESEEEECCCEEEC
T ss_pred EEEecCCeEEEEECCC--CEEECCEEEECCCCCcc
Confidence 774 34556778888 68999999999999874
No 296
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=96.81 E-value=0.00098 Score=78.28 Aligned_cols=44 Identities=11% Similarity=0.058 Sum_probs=33.7
Q ss_pred CCeEEEeee-EEEec--CCeEEEEeC---CCCeeEEEcCeEEEccCCCCC
Q psy14927 855 NKVTQLNGH-GKITG--PNTVTVIKS---DGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 855 ~gV~~~~g~-v~~id--~~~~~v~~~---~G~~~~i~~d~lIIATG~~p~ 898 (1074)
.||+++.++ |+.+. .+.+.|++. +|+..++.+|.||+|||..|.
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQ 378 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECC
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCC
Confidence 699999994 65554 345666665 675567999999999999885
No 297
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=96.80 E-value=0.065 Score=50.92 Aligned_cols=152 Identities=12% Similarity=-0.016 Sum_probs=81.3
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHccCChhHHHHHHHHhCC
Q psy14927 107 AAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLETIEPDKAVLLYHKAGA 186 (1074)
Q Consensus 107 ~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~~~~~~A~~ly~kaG~ 186 (1074)
+...+|..|...|++++|+++|.+ |++++...+....... .+...| ..|...|+
T Consensus 11 ~~~~l~~~~~~~~~~~~A~~~~~~------al~~~~~~~~~~~~~~--------~~~~l~------------~~~~~~g~ 64 (164)
T 3ro3_A 11 AFGNLGNTHYLLGNFRDAVIAHEQ------RLLIAKEFGDKAAERI--------AYSNLG------------NAYIFLGE 64 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH------HHHHHHHHTCHHHHHH--------HHHHHH------------HHHHHTTC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHH------HHHHHHHhCCchHHHH--------HHHHHH------------HHHHHcCC
Confidence 466889999999999999998754 5566655432222111 111233 33334444
Q ss_pred hHHHHHHHHhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcC-CCCCChhHHHHHHHHHHcc
Q psy14927 187 LHKALDLAFKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSS-DWKSQPELLKSIISFYSKG 265 (1074)
Q Consensus 187 ~~kAl~l~~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~-~~~~~~~~~~~i~~~Y~k~ 265 (1074)
+.+|++.+.+ |++..-+.++... ...++...+..+... +++..-..++.++.+....
T Consensus 65 ~~~A~~~~~~-------------a~~~~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 122 (164)
T 3ro3_A 65 FETASEYYKK-------------TLLLARQLKDRAV---------EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 122 (164)
T ss_dssp HHHHHHHHHH-------------HHHHHHHTTCHHH---------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH-------------HHHHHHHhCCcHH---------HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc
Confidence 4444444433 1111111222211 111222222222222 2222223344445555555
Q ss_pred CCHHHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhcC
Q psy14927 266 KAPHLLANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLLKHN 307 (1074)
Q Consensus 266 ~~~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~~ 307 (1074)
+.....+..+...+... ...|+|++|...+.++++...+.+
T Consensus 123 ~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~a~~~~~~~~ 163 (164)
T 3ro3_A 123 KDRIGEGRACWSLGNAY-TALGNHDQAMHFAEKHLEISREVG 163 (164)
T ss_dssp TCHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHTTC-
T ss_pred cchHhHHHHHHHHHHHH-HHccCHHHHHHHHHHHHHHHHHhC
Confidence 55555667777778887 788999999999999998876644
No 298
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.80 E-value=0.00071 Score=78.77 Aligned_cols=90 Identities=13% Similarity=0.114 Sum_probs=63.4
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEecC
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITGP 869 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id~ 869 (1074)
+|+|||||+.|+..|..+++ ++++..+...... . ...+...+.+.+++.||+++.+ .++.++.
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~--------~---~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 219 (431)
T 1q1r_A 151 RLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV--------T---APPVSAFYEHLHREAGVDIRTGTQVCGFEM 219 (431)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT--------S---CHHHHHHHHHHHHHHTCEEECSCCEEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch--------h---hHHHHHHHHHHHHhCCeEEEeCCEEEEEEe
Confidence 39999999999999999988 4555443321110 0 0223334566777789999999 5777653
Q ss_pred ----CeE-EEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 870 ----NTV-TVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 870 ----~~~-~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
+.+ .|.+++| .++.+|.||+|+|.+|.
T Consensus 220 ~~~~~~v~~v~~~~G--~~i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 220 STDQQKVTAVLCEDG--TRLPADLVIAGIGLIPN 251 (431)
T ss_dssp CTTTCCEEEEEETTS--CEEECSEEEECCCEEEC
T ss_pred ccCCCcEEEEEeCCC--CEEEcCEEEECCCCCcC
Confidence 233 5777888 68999999999999874
No 299
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.77 E-value=0.0013 Score=78.76 Aligned_cols=54 Identities=11% Similarity=-0.014 Sum_probs=38.6
Q ss_pred hhhhHHHHhhhCCeEEEee-eEEEec--CC----eEEEEeCCCC-eeEEEcCeEEEccCCCC
Q psy14927 844 LTGGIAHLFKSNKVTQLNG-HGKITG--PN----TVTVIKSDGS-TEEVKTKNILIATGSEV 897 (1074)
Q Consensus 844 l~~~~~~~l~~~gV~~~~g-~v~~id--~~----~~~v~~~~G~-~~~i~~d~lIIATG~~p 897 (1074)
+...+.+.+...|++++++ +|+.+. .+ .+++++.++. ..++.+|+||.|+|...
T Consensus 122 l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 122 LEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 3344666677789999999 466653 44 6666665432 35799999999999975
No 300
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=96.77 E-value=0.0054 Score=57.09 Aligned_cols=86 Identities=12% Similarity=0.050 Sum_probs=60.6
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhH
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRV 85 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~ 85 (1074)
+...|++++|+..|+++-..+ ++++..|..+|..+...|++++|.++|.++=..
T Consensus 14 ~~~~~~~~~A~~~~~~al~~~--------------------p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------ 67 (126)
T 3upv_A 14 YFTKSDWPNAVKAYTEMIKRA--------------------PEDARGYSNRAAALAKLMSFPEAIADCNKAIEK------ 67 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHC--------------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------
T ss_pred HHHhcCHHHHHHHHHHHHHhC--------------------CCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------
Confidence 455667777777776654222 344667777777777777777777777655322
Q ss_pred hhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHHhC
Q psy14927 86 LCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVAG 132 (1074)
Q Consensus 86 l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~ 132 (1074)
.+.+..+.+.+|..+...|++++|++.|.++-
T Consensus 68 ---------------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al 99 (126)
T 3upv_A 68 ---------------DPNFVRAYIRKATAQIAVKEYASALETLDAAR 99 (126)
T ss_dssp ---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ---------------CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 24567788899999999999999999876543
No 301
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=96.77 E-value=0.0018 Score=64.47 Aligned_cols=106 Identities=10% Similarity=0.159 Sum_probs=76.5
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh------
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY------ 79 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~------ 79 (1074)
+...|++++|+..|+++-.. .++++..|..+|..+...|++++|.++|.++-..
T Consensus 20 ~~~~~~~~~A~~~~~~al~~--------------------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~ 79 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRA--------------------NPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAE 79 (177)
T ss_dssp CC-----CCCCHHHHHHHHH--------------------CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHH
T ss_pred hhhccCHHHHHHHHHHHHHh--------------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Confidence 44556666666666554421 2456789999999999999999999999986432
Q ss_pred --hhhhhH-hhccCCH--HHHHHHHH-----hcCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 80 --LSMVRV-LCFLQDF--SRAAELAN-----ASGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 80 --~~~vr~-l~~~~~~--~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
..+..+ +...|++ ++|.+..+ .+.+..+.+.+|..|...|++++|+++|.++
T Consensus 80 ~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 141 (177)
T 2e2e_A 80 LYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKV 141 (177)
T ss_dssp HHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 234455 5578888 88887765 3567788889999999999999999987764
No 302
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.74 E-value=0.0013 Score=72.89 Aligned_cols=89 Identities=16% Similarity=0.156 Sum_probs=60.4
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEecC
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITGP 869 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id~ 869 (1074)
+|+|||||+.|+..|..+++ ++++..+.... . ..+...+.+.+++.||+++++ .++.++.
T Consensus 147 ~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------~----~~~~~~l~~~l~~~gv~i~~~~~v~~i~~ 212 (320)
T 1trb_A 147 KVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA----------E----KILIKRLMDKVENGNIILHTNRTLEEVTG 212 (320)
T ss_dssp EEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC----------C----HHHHHHHHHHHHTSSEEEECSCEEEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc----------C----HHHHHHHHHhcccCCeEEEcCceeEEEEc
Confidence 49999999999999999987 44444332210 0 122333556677789999998 5777654
Q ss_pred Ce--E-EEEeCC----CCeeEEEcCeEEEccCCCCC
Q psy14927 870 NT--V-TVIKSD----GSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 870 ~~--~-~v~~~~----G~~~~i~~d~lIIATG~~p~ 898 (1074)
+. + .|++.+ |+..++.+|.||+|||.+|.
T Consensus 213 ~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~ 248 (320)
T 1trb_A 213 DQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPN 248 (320)
T ss_dssp CSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEES
T ss_pred CCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCC
Confidence 32 2 244443 54468999999999999874
No 303
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=96.73 E-value=0.0011 Score=76.61 Aligned_cols=50 Identities=10% Similarity=0.084 Sum_probs=33.4
Q ss_pred HHHHhhh-CC-eEEEee-eEEEec-CCeEEEEeCC---CCeeEEEcCeEEEccCCCC
Q psy14927 848 IAHLFKS-NK-VTQLNG-HGKITG-PNTVTVIKSD---GSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 848 ~~~~l~~-~g-V~~~~g-~v~~id-~~~~~v~~~~---G~~~~i~~d~lIIATG~~p 897 (1074)
+.+.+.+ .| ++++.+ +|+.++ .+.+.|++.+ |...++.+|.||.|+|...
T Consensus 113 L~~~~~~~~g~~~v~~~~~v~~i~~~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S 169 (410)
T 3c96_A 113 LLAAVRERLGQQAVRTGLGVERIEERDGRVLIGARDGHGKPQALGADVLVGADGIHS 169 (410)
T ss_dssp HHHHHHHHHCTTSEEESEEEEEEEEETTEEEEEEEETTSCEEEEEESEEEECCCTTC
T ss_pred HHHHHHhhCCCcEEEECCEEEEEecCCccEEEEecCCCCCceEEecCEEEECCCccc
Confidence 4444444 35 588888 466554 3346666654 6445799999999999875
No 304
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.73 E-value=0.002 Score=79.64 Aligned_cols=48 Identities=13% Similarity=0.119 Sum_probs=35.4
Q ss_pred HHHHhhhCCeEEEee-eEEEec--CCeEEEEeCCCCee-EEEcCeEEEccCCCC
Q psy14927 848 IAHLFKSNKVTQLNG-HGKITG--PNTVTVIKSDGSTE-EVKTKNILIATGSEV 897 (1074)
Q Consensus 848 ~~~~l~~~gV~~~~g-~v~~id--~~~~~v~~~~G~~~-~i~~d~lIIATG~~p 897 (1074)
+.+.+.+.|++++.+ +|+.+. .+.+.|.+.+| . ++.+|.||+|||...
T Consensus 418 L~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G--~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 418 LMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQS--QAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-C--CCCEEESEEEECCGGGT
T ss_pred HHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCC--cEEEECCEEEECCCcch
Confidence 445556779999998 577664 44577777777 4 689999999999864
No 305
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=96.71 E-value=0.0042 Score=61.05 Aligned_cols=105 Identities=14% Similarity=0.126 Sum_probs=72.3
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhh
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVR 84 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr 84 (1074)
.+.+.|+|++|+..|.++-..+...|.- . .+-..+.+...|...|-.+...|+|++|+.+|.+|= +
T Consensus 20 ~l~~~g~~eeAi~~Y~kAL~l~p~~~~~---~-----a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL------~ 85 (159)
T 2hr2_A 20 RQLVAGEYDEAAANCRRAMEISHTMPPE---E-----AFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKAL------H 85 (159)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHTTSCTT---S-----CCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH------H
T ss_pred HHHHCCCHHHHHHHHHHHHhhCCCCcch---h-----hhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHH------H
Confidence 4667899999999999998666432221 0 000000112388889999999999999999997663 2
Q ss_pred HhhccCCHHHHHHHHHhcCChHHH----HHHHHHHHhcCChHHHHHHHHHh
Q psy14927 85 VLCFLQDFSRAAELANASGDTAAA----YHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 85 ~l~~~~~~~~a~~i~~~~~~~~~~----~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
++..-+.+ ++.+..+. +..|..+...|++++|++.|.++
T Consensus 86 l~n~~~e~--------~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kA 128 (159)
T 2hr2_A 86 YFNRRGEL--------NQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKV 128 (159)
T ss_dssp HHHHHCCT--------TSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhccccC--------CCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHH
Confidence 21111111 33455567 89999999999999999987654
No 306
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.70 E-value=0.00067 Score=77.14 Aligned_cols=47 Identities=13% Similarity=0.045 Sum_probs=35.3
Q ss_pred HHHHhhhCCeEEEee-eEEEec--CCeEEEEeCCCCeeEEEcCeEEEccCCCC
Q psy14927 848 IAHLFKSNKVTQLNG-HGKITG--PNTVTVIKSDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 848 ~~~~l~~~gV~~~~g-~v~~id--~~~~~v~~~~G~~~~i~~d~lIIATG~~p 897 (1074)
+.+.+.+.|++++.+ .|+.+. .+.+.|.+.+| ++.+|.||+|||...
T Consensus 160 l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g---~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 160 YLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG---SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE---EEEESEEEECCGGGH
T ss_pred HHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC---EEEcCEEEECCChhH
Confidence 556667789999988 465553 45566777666 799999999999853
No 307
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.69 E-value=0.00089 Score=77.00 Aligned_cols=40 Identities=10% Similarity=0.037 Sum_probs=30.7
Q ss_pred CeEEEee-eEEEec--CCeEEEEeCCCCeeEEEcCeEEEccCCCC
Q psy14927 856 KVTQLNG-HGKITG--PNTVTVIKSDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 856 gV~~~~g-~v~~id--~~~~~v~~~~G~~~~i~~d~lIIATG~~p 897 (1074)
+++++++ +|+.++ .+.++|++.+| .++.+|.||.|+|...
T Consensus 140 ~~~i~~~~~v~~i~~~~~~v~v~~~~g--~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 140 NDTVIWDRKLVMLEPGKKKWTLTFENK--PSETADLVILANGGMS 182 (398)
T ss_dssp TTSEEESCCEEEEEECSSSEEEEETTS--CCEEESEEEECSCTTC
T ss_pred CCEEEECCEEEEEEECCCEEEEEECCC--cEEecCEEEECCCcch
Confidence 3567777 576664 34577888888 5799999999999875
No 308
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=96.68 E-value=0.031 Score=59.30 Aligned_cols=85 Identities=18% Similarity=0.167 Sum_probs=66.9
Q ss_pred cCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh-----------hhhhhHhhccCCHHHHHHHHHh-----cC---ChH
Q psy14927 46 QSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY-----------LSMVRVLCFLQDFSRAAELANA-----SG---DTA 106 (1074)
Q Consensus 46 ~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~-----------~~~vr~l~~~~~~~~a~~i~~~-----~~---~~~ 106 (1074)
..+++..+-+.|..+...|+|++|...|.++-.. ..+..++..+|++++|....+. ++ ...
T Consensus 11 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~ 90 (261)
T 3qky_A 11 RHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQ 90 (261)
T ss_dssp CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHH
Confidence 3567888999999999999999999999987432 3455668889999999887662 22 245
Q ss_pred HHHHHHHHHHh--------cCChHHHHHHHHH
Q psy14927 107 AAYHLARQYEN--------SGQFDEAIHFYSV 130 (1074)
Q Consensus 107 ~~~~la~~~~~--------~g~~~~Ai~~y~~ 130 (1074)
+.+.+|..+.. .|++++|++.|.+
T Consensus 91 a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~ 122 (261)
T 3qky_A 91 AEYERAMCYYKLSPPYELDQTDTRKAIEAFQL 122 (261)
T ss_dssp HHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccccchhHHHHHHHHHH
Confidence 67799999988 8889999888765
No 309
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=96.67 E-value=0.0033 Score=61.25 Aligned_cols=77 Identities=14% Similarity=0.152 Sum_probs=61.2
Q ss_pred HHHHHHHhccCHHHHHHHHHHhhCh--------hhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCCh
Q psy14927 55 WWAQYIESTEDMDLAMKYYEEARDY--------LSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQF 121 (1074)
Q Consensus 55 ~~a~~~e~~~~~~~A~~~y~~a~d~--------~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~ 121 (1074)
++|..+.++|+++.|+..|.++-.. ..+.++|..+|++++|.+..+ .+.+..+.+.+|..|...|++
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 3566777889999999999886443 467888999999999988766 467888999999999999999
Q ss_pred HHHHHHHHHh
Q psy14927 122 DEAIHFYSVA 131 (1074)
Q Consensus 122 ~~Ai~~y~~a 131 (1074)
++|+++|.++
T Consensus 82 ~~A~~~~~~a 91 (150)
T 4ga2_A 82 DKAVECYRRS 91 (150)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987653
No 310
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.64 E-value=0.0039 Score=71.49 Aligned_cols=56 Identities=20% Similarity=0.265 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEecCCe-EEEEEeeccCCCCceEEEcCEEEEccCCcc
Q psy14927 948 GEVAKQFQRILGKQGMQFKLGTKVTGASKSGDN-ITVTIENVKDPTKKEELSCDALLVCVGRRP 1010 (1074)
Q Consensus 948 ~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p 1010 (1074)
..+...+.+.+++.|++++.++.|+++..+++. ..|.+.+ | ++.+|.||+|+|...
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~----g---~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTR----G---TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETT----C---CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCC----c---eEECCEEEECCchhH
Confidence 467777888889999999999999999876554 3444322 3 699999999999754
No 311
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=96.64 E-value=0.0017 Score=75.12 Aligned_cols=56 Identities=9% Similarity=0.212 Sum_probs=44.8
Q ss_pred CHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEE-EEEeeccCCCCceEEEcCEEEEccCCc
Q psy14927 947 DGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNIT-VTIENVKDPTKKEELSCDALLVCVGRR 1009 (1074)
Q Consensus 947 ~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~-v~~~~~~~~g~~~~i~~D~vi~a~G~~ 1009 (1074)
...+.+.+.+.+++.|++|++++.|++|..+++++. |++ + +.++.+|.||+++|..
T Consensus 195 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~------g~~~~ad~VV~a~~~~ 251 (425)
T 3ka7_A 195 CKGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-D------DRIHDADLVISNLGHA 251 (425)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-T------TEEEECSEEEECSCHH
T ss_pred HHHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-C------CEEEECCEEEECCCHH
Confidence 356778888899999999999999999998766643 432 2 4579999999999864
No 312
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=96.63 E-value=0.0076 Score=70.96 Aligned_cols=139 Identities=12% Similarity=0.054 Sum_probs=87.2
Q ss_pred HHhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCCh---HHHHHHHHHHHhccCHHHHHHHHHHhhChh
Q psy14927 4 EETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDP---VLLKWWAQYIESTEDMDLAMKYYEEARDYL 80 (1074)
Q Consensus 4 ~~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~ 80 (1074)
+.+.++|++++|..+|+++.....++ + ..++| ..+..+|..+..+|+|++|+.+|.++=+..
T Consensus 317 ~~~~~qg~~~eA~~l~~~aL~~~~~~----l-----------g~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~ 381 (490)
T 3n71_A 317 DKARSEGLYHEVVKLCRECLEKQEPV----F-----------ADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGY 381 (490)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHTTT----B-----------CTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHh----c-----------CCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 34678999999999999987433222 1 11233 356677999999999999999998764431
Q ss_pred hhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHHhCChHHHHHHHHHhCchHHHHHHhhhcC--
Q psy14927 81 SMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSCGNAVRLCKEQALDDQLWNLALSAG-- 158 (1074)
Q Consensus 81 ~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~-- 158 (1074)
+-..--+.|+-| ...+.||..|..+|++++|+.+|.+|-..-+.. + .++-+
T Consensus 382 ---~~~lG~~Hp~~a----------~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~-----l---------G~~Hp~~ 434 (490)
T 3n71_A 382 ---MKLYHHNNAQLG----------MAVMRAGLTNWHAGHIEVGHGMICKAYAILLVT-----H---------GPSHPIT 434 (490)
T ss_dssp ---HHHSCTTCHHHH----------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----T---------CTTSHHH
T ss_pred ---HHHcCCCCHHHH----------HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-----h---------CCCChHH
Confidence 111112233211 235689999999999999999988765443322 1 12111
Q ss_pred chhHHHHHHHHcc-CChhHHHHHHHHh
Q psy14927 159 PSEQIEAATYLET-IEPDKAVLLYHKA 184 (1074)
Q Consensus 159 ~~~~~~~A~~~e~-~~~~~A~~ly~ka 184 (1074)
.+.+...++-+.+ +.+.+|-.+|.++
T Consensus 435 ~~~~~~l~~~~~e~~~~~~ae~~~~~~ 461 (490)
T 3n71_A 435 KDLEAMRMQTEMELRMFRQNEFMYHKM 461 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222233443333 6678888888876
No 313
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=96.60 E-value=0.005 Score=63.47 Aligned_cols=100 Identities=16% Similarity=0.172 Sum_probs=63.4
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhc--CCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhh
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQ--SKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSM 82 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~ 82 (1074)
.+.+.|++++|+.+|+++-..+..-+..++.. . +.. ...+.+...+|..+...|++++|..+|.++=..
T Consensus 13 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~-----~-~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--- 83 (208)
T 3urz_A 13 AAIEAGQNGQAVSYFRQTIALNIDRTEMYYWT-----N-VDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK--- 83 (208)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHH-----H-SCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCChHHHHHh-----h-hcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH---
Confidence 46678999999999998875542222222110 0 000 011334444788888888888888888664221
Q ss_pred hhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 83 VRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 83 vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
.+.+..+.+.+|..|...|++++|+++|.++
T Consensus 84 ------------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 114 (208)
T 3urz_A 84 ------------------APNNVDCLEACAEMQVCRGQEKDALRMYEKI 114 (208)
T ss_dssp ------------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred ------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3456677778888888888888888776654
No 314
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=96.60 E-value=0.0096 Score=73.52 Aligned_cols=128 Identities=18% Similarity=0.118 Sum_probs=95.9
Q ss_pred hhcCCHHHHHHHHHHcC--------cccchh-------hhHhh--hcHHHHHHHhhc-----CCChHHHHHHHHHHHhcc
Q psy14927 7 MKNGDIDRAIRMFEKAE--------THQQHV-------PRMLL--ENTDKLEKYIIQ-----SKDPVLLKWWAQYIESTE 64 (1074)
Q Consensus 7 ~~~g~~~eA~~~Ye~~~--------~~~~~~-------~~~~~--~~~~~~~~~~~~-----~~~~~l~~~~a~~~e~~~ 64 (1074)
...|++++|++.|+++- ..+..- .+.++ ++++++.....+ ++++..|..+|..+...|
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g 481 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTG 481 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHT
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcC
Confidence 35799999999999986 222111 22222 467666665554 678889999999999999
Q ss_pred CHHHHHHHHHHhhC--------hhhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 65 DMDLAMKYYEEARD--------YLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 65 ~~~~A~~~y~~a~d--------~~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
++++|.++|.++=. +.++..++..+|++++ .+..+ ++.+..+.+.+|..+.+.|++++|++.|.++
T Consensus 482 ~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 560 (681)
T 2pzi_A 482 DYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEV 560 (681)
T ss_dssp CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhh
Confidence 99999999998642 2455666888888877 54443 4677888999999999999999999999887
Q ss_pred CChH
Q psy14927 132 GSCG 135 (1074)
Q Consensus 132 ~~~~ 135 (1074)
-..+
T Consensus 561 l~l~ 564 (681)
T 2pzi_A 561 PPTS 564 (681)
T ss_dssp CTTS
T ss_pred cccC
Confidence 6544
No 315
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=96.59 E-value=0.026 Score=66.35 Aligned_cols=181 Identities=13% Similarity=0.063 Sum_probs=105.2
Q ss_pred CCChHHHHHHHHHHHhccCH-HHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHH
Q psy14927 47 SKDPVLLKWWAQYIESTEDM-DLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAI 125 (1074)
Q Consensus 47 ~~~~~l~~~~a~~~e~~~~~-~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai 125 (1074)
..+...+..+|..+...|++ ++|+++|.++=.. .+.+..+.+.+|..|..+|++++|+
T Consensus 99 ~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~---------------------~p~~~~a~~~lg~~~~~~g~~~~A~ 157 (474)
T 4abn_A 99 QVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKL---------------------EPELVEAWNQLGEVYWKKGDVTSAH 157 (474)
T ss_dssp CCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH---------------------CTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred chhHHHHHHHHHHHHhccccHHHHHHHHHHHHhh---------------------CCCCHHHHHHHHHHHHHcCCHHHHH
Confidence 45778999999999999999 9999999776332 2456778889999999999999999
Q ss_pred HHHHHhCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHccC-ChhHHHHHHHHhCChHHHHHHHHhhccCCcch
Q psy14927 126 HFYSVAGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLETI-EPDKAVLLYHKAGALHKALDLAFKLTLSNSGL 204 (1074)
Q Consensus 126 ~~y~~a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~~-~~~~A~~ly~kaG~~~kAl~l~~~~~~~~~~~ 204 (1074)
++|.++-..+ +. ...+...|..+... . .....+.|++.+|+..+.+.-
T Consensus 158 ~~~~~al~~~-------------------p~--~~~~~~lg~~~~~~~~----~~~~~~~g~~~~A~~~~~~al------ 206 (474)
T 4abn_A 158 TCFSGALTHC-------------------KN--KVSLQNLSMVLRQLQT----DSGDEHSRHVMDSVRQAKLAV------ 206 (474)
T ss_dssp HHHHHHHTTC-------------------CC--HHHHHHHHHHHTTCCC----SCHHHHHHHHHHHHHHHHHHH------
T ss_pred HHHHHHHhhC-------------------CC--HHHHHHHHHHHHHhcc----CChhhhhhhHHHHHHHHHHHH------
Confidence 9987653322 11 12222334333321 0 001112355555555544421
Q ss_pred HHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcC--CCCCChhHHHHHHHHHHccCCHH----HHHHHHHHH
Q psy14927 205 VFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSS--DWKSQPELLKSIISFYSKGKAPH----LLANFYVSC 278 (1074)
Q Consensus 205 ~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~--~~~~~~~~~~~i~~~Y~k~~~~~----~aa~~~~~~ 278 (1074)
+ +... +...|...+..+..+ ....+++.+..++.+|.++-..+ .-...+...
T Consensus 207 -------~--~~p~-------------~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~l 264 (474)
T 4abn_A 207 -------Q--MDVL-------------DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNR 264 (474)
T ss_dssp -------H--HCTT-------------CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHH
T ss_pred -------H--hCCC-------------CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHH
Confidence 0 0011 112222222222211 00014556666666666655433 234556666
Q ss_pred HhHHHHhhcCHHHHHHHHHHHHHH
Q psy14927 279 AQVEIDEFGNYEKGLGALNEAKRC 302 (1074)
Q Consensus 279 a~~ei~e~~~y~~a~~~l~~a~~~ 302 (1074)
+... ...|+|++|...+.+|++.
T Consensus 265 g~~~-~~~g~~~~A~~~~~~al~l 287 (474)
T 4abn_A 265 ATLH-KYEESYGEALEGFSQAAAL 287 (474)
T ss_dssp HHHH-HHTTCHHHHHHHHHHHHHH
T ss_pred HHHH-HHcCCHHHHHHHHHHHHHh
Confidence 6666 6778888888888887765
No 316
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=96.58 E-value=0.0014 Score=79.05 Aligned_cols=103 Identities=11% Similarity=0.011 Sum_probs=64.4
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhcccccc------------------------------------------
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGV------------------------------------------ 826 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~------------------------------------------ 826 (1074)
+.+|+||||||+|+++|+.|++ +++|+.+....
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 128 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQ 128 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcccc
Confidence 3459999999999999999999 67776543220
Q ss_pred ccchhhhhhh----hhHHHhhhhhhHHHHhhhCCeEEEee-eEEEec--CCeEEEEe--CCCCeeEEEcCeEEEccCCCC
Q psy14927 827 KLNLETMMGT----KSAAVKALTGGIAHLFKSNKVTQLNG-HGKITG--PNTVTVIK--SDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 827 ~~~~~~~~~~----~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id--~~~~~v~~--~~G~~~~i~~d~lIIATG~~p 897 (1074)
.+++...... ..-....+...+.+.+...||+++.+ +|+.+. .+.++|++ .+|. .++++|+||.|+|...
T Consensus 129 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~-~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 129 GLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGP-YPVRARYGVGCDGGRS 207 (570)
T ss_dssp CCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEE-EEEEESEEEECSCSSC
T ss_pred cccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCc-EEEEeCEEEEcCCCCc
Confidence 0000000000 00001223334556666679999999 577764 35566766 4552 5799999999999875
No 317
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=96.57 E-value=0.0053 Score=57.34 Aligned_cols=65 Identities=17% Similarity=0.020 Sum_probs=46.8
Q ss_pred CCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHH
Q psy14927 47 SKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIH 126 (1074)
Q Consensus 47 ~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~ 126 (1074)
++++..|..+|..+...|++++|+.+|.++=.. .+.+..+.+.+|..+...|++++|++
T Consensus 48 P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l---------------------~P~~~~~~~~la~~~~~~g~~~~A~~ 106 (121)
T 1hxi_A 48 PEREEAWRSLGLTQAENEKDGLAIIALNHARML---------------------DPKDIAVHAALAVSHTNEHNANAALA 106 (121)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------------CTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------------------CCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 344666666677777777777777666544322 34567788899999999999999999
Q ss_pred HHHHhC
Q psy14927 127 FYSVAG 132 (1074)
Q Consensus 127 ~y~~a~ 132 (1074)
.|.++-
T Consensus 107 ~~~~al 112 (121)
T 1hxi_A 107 SLRAWL 112 (121)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987653
No 318
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=96.57 E-value=0.0012 Score=77.75 Aligned_cols=54 Identities=17% Similarity=0.308 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEecCCe-EEEEEeeccCCCCceEEEcCEEEEccCC
Q psy14927 948 GEVAKQFQRILGKQGMQFKLGTKVTGASKSGDN-ITVTIENVKDPTKKEELSCDALLVCVGR 1008 (1074)
Q Consensus 948 ~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~~g~~~~i~~D~vi~a~G~ 1008 (1074)
..+.+.+.+.+.+.|++|++++.|++|..++++ +.|++ + +.++.+|.||+|++.
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~------~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-R------DSSLEADHVISAIPA 288 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-S------SCEEEESEEEECSCH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-C------CeEEEcCEEEECCCH
Confidence 356778888889999999999999999876555 55542 2 236999999999874
No 319
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=96.57 E-value=0.016 Score=53.36 Aligned_cols=79 Identities=24% Similarity=0.386 Sum_probs=61.0
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHhhC--------hhhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhc
Q psy14927 52 LLKWWAQYIESTEDMDLAMKYYEEARD--------YLSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENS 118 (1074)
Q Consensus 52 l~~~~a~~~e~~~~~~~A~~~y~~a~d--------~~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~ 118 (1074)
.|..+|..+...|++++|.++|.++-. +..+..++...|++++|.+..++ +.+......+|..+...
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQ 82 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHh
Confidence 456678888999999999999988632 23456667888999999887663 34566777888988889
Q ss_pred CChHHHHHHHHH
Q psy14927 119 GQFDEAIHFYSV 130 (1074)
Q Consensus 119 g~~~~Ai~~y~~ 130 (1074)
|++++|+++|.+
T Consensus 83 ~~~~~A~~~~~~ 94 (136)
T 2fo7_A 83 GDYDEAIEYYQK 94 (136)
T ss_dssp TCHHHHHHHHHH
T ss_pred cCHHHHHHHHHH
Confidence 998888887654
No 320
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.57 E-value=0.0028 Score=73.75 Aligned_cols=103 Identities=14% Similarity=0.116 Sum_probs=0.0
Q ss_pred hhhhhccccchHHHHHHHhh------hhhhhccccc--------------------------------------------
Q psy14927 796 VVLNTLGNCAAVQANYHLAT------KLFTQAGDKG-------------------------------------------- 825 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~------~l~e~~~~~g-------------------------------------------- 825 (1074)
+|||||||++|+++|+.|++ +++|+.+..+
T Consensus 8 dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 87 (438)
T 3dje_A 8 SLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAISAGNDVNKVISSGQYSNNKDEIEVNEILAEEAFNGWKNDPLF 87 (438)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCTTCTTCSSCEEECCCCSCCCHHHHHHHHHHHHHHHHHHHHCTTT
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCccCCCCccEEEeccCCchhhhcchhHHHHHHHHHHHhhCccc
Q ss_pred -----------------------------------cccchhhhhhhhhH-H---------------------HhhhhhhH
Q psy14927 826 -----------------------------------VKLNLETMMGTKSA-A---------------------VKALTGGI 848 (1074)
Q Consensus 826 -----------------------------------~~~~~~~~~~~~~~-~---------------------~~~l~~~~ 848 (1074)
..++...+...... . ...+...+
T Consensus 88 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~l~~~~~~g~~g~~~~~~~g~~~~~~~~~~L 167 (438)
T 3dje_A 88 KPYYHDTGLLMSACSQEGLDRLGVRVRPGEDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARSGAGWAHARNALVAA 167 (438)
T ss_dssp GGGEECCCEEEEECSHHHHHHHHHHHCGGGCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEESSSCEEECHHHHHHHH
T ss_pred cCcEeccceEEEecCcchHHHHHHHHhhcccCCceecCCHHHHHHhCCcccccCCCCCceEEEeCCCCEEecHHHHHHHH
Q ss_pred HHHhhhCCeEEEee----eEEEe--cCCeEE-EEeCCCCeeEEEcCeEEEccCCCCCCC
Q psy14927 849 AHLFKSNKVTQLNG----HGKIT--GPNTVT-VIKSDGSTEEVKTKNILIATGSEVTPF 900 (1074)
Q Consensus 849 ~~~l~~~gV~~~~g----~v~~i--d~~~~~-v~~~~G~~~~i~~d~lIIATG~~p~~i 900 (1074)
.+.+.+.||+|+.+ +|+.+ +.+.+. |.+.+| .++.+|.||+|||+....+
T Consensus 168 ~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G--~~i~Ad~VV~AtG~~s~~l 224 (438)
T 3dje_A 168 AREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADG--KIWRAERTFLCAGASAGQF 224 (438)
T ss_dssp HHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTT--EEEECSEEEECCGGGGGGT
T ss_pred HHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCC--CEEECCEEEECCCCChhhh
No 321
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.54 E-value=0.0013 Score=77.90 Aligned_cols=99 Identities=15% Similarity=0.159 Sum_probs=64.7
Q ss_pred hhhhhccccchHHHHHHHhhhhhhhc-----c--cccccc----chhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-e
Q psy14927 796 VVLNTLGNCAAVQANYHLATKLFTQA-----G--DKGVKL----NLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-H 863 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~~l~e~~-----~--~~g~~~----~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~ 863 (1074)
+|+||||||.|++.|..++. +.... + .....+ ..+.+.+. +...+.....+.+++.||+++++ .
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~-~~~~~l~~~~~~~~~~~~V~lve~~~~il~~---~~~~~~~~~~~~L~~~GV~v~~~~~ 294 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQD-YVHQDLRKFLPALAEEVQIHLVEALPIVLNM---FEKKLSSYAQSHLENTSIKVHLRTA 294 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HHHHTHHHHCHHHHHHCEEEEECSSSSSSTT---SCHHHHHHHHHHHHHTTCEEETTEE
T ss_pred ceEEECCCcchhhhHHHHHH-HHHHHHHhhcccccccceeEEeccccccccC---CCHHHHHHHHHHHHhcceeeecCce
Confidence 48999999999999998876 11110 0 000000 00111111 12445556778889999999999 5
Q ss_pred EEEecCCeEEEE--eCCCCe--eEEEcCeEEEccCCCCC
Q psy14927 864 GKITGPNTVTVI--KSDGST--EEVKTKNILIATGSEVT 898 (1074)
Q Consensus 864 v~~id~~~~~v~--~~~G~~--~~i~~d~lIIATG~~p~ 898 (1074)
|+.++++.+.+. ..+|.. .++.+|.||+|+|..|+
T Consensus 295 v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 295 VAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp EEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECC
T ss_pred EEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCC
Confidence 888988876554 355532 46999999999998874
No 322
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.51 E-value=0.0024 Score=72.16 Aligned_cols=90 Identities=16% Similarity=0.093 Sum_probs=60.5
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEec
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITG 868 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id 868 (1074)
++|+|||||+.|+..|..+++ ++++..+..... ..+...+.+.+++.||+++.+ .++.++
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~--------------~~~~~~l~~~~~~~gv~i~~~~~v~~i~ 229 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH--------------GKTAHEVERARANGTIDVYLETEVASIE 229 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC--------------SHHHHSSHHHHHHTSEEEESSEEEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC--------------HHHHHHHHHHhhcCceEEEcCcCHHHhc
Confidence 349999999999999999987 344443322111 111223445566779999999 677775
Q ss_pred CC--eE-EEEe--CCCCeeEEEcCeEEEccCCCCC
Q psy14927 869 PN--TV-TVIK--SDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 869 ~~--~~-~v~~--~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
.+ .+ .|++ .+|+..++.+|.||+|||..|.
T Consensus 230 ~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~ 264 (360)
T 3ab1_A 230 ESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSN 264 (360)
T ss_dssp EETTEEEEEEEEETTCCEEEEECSEEEECCCBCCS
T ss_pred cCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCC
Confidence 42 21 3444 4675568999999999999874
No 323
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.51 E-value=0.0071 Score=72.64 Aligned_cols=56 Identities=18% Similarity=0.294 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHhC-CCEEEeCceEEEEEecCCe--EEEEEeeccCCCCceEEEcCEEEEccCCcc
Q psy14927 948 GEVAKQFQRILGKQ-GMQFKLGTKVTGASKSGDN--ITVTIENVKDPTKKEELSCDALLVCVGRRP 1010 (1074)
Q Consensus 948 ~~~~~~~~~~l~~~-gV~i~~~~~v~~i~~~~~~--~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p 1010 (1074)
..+...+.+.+++. ||+++.+ +|+++..++++ +.|++.+ +.++.+|.||.|+|..+
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~------G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTAT------GRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETT------SCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECC------CCEEECCEEEECCCCch
Confidence 35677788888888 9999999 99999865444 4454433 45799999999999754
No 324
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=96.50 E-value=0.012 Score=56.98 Aligned_cols=83 Identities=14% Similarity=0.018 Sum_probs=48.4
Q ss_pred CChHHHHHHHHHHHhccCHHHHHHHHHHhhCh--------hhhhhHhhccCCHHHHHHHHHh-----cCChHHHH--HHH
Q psy14927 48 KDPVLLKWWAQYIESTEDMDLAMKYYEEARDY--------LSMVRVLCFLQDFSRAAELANA-----SGDTAAAY--HLA 112 (1074)
Q Consensus 48 ~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~--------~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~--~la 112 (1074)
.++..+..+|..+...|++++|.++|.++-.. ..+..++..+|++++|.+..+. +.+..... ..+
T Consensus 45 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 124 (166)
T 1a17_A 45 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 124 (166)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 45677777888888888888888888765332 2333445566666666655542 23333332 233
Q ss_pred HHHHhcCChHHHHHHHHH
Q psy14927 113 RQYENSGQFDEAIHFYSV 130 (1074)
Q Consensus 113 ~~~~~~g~~~~Ai~~y~~ 130 (1074)
..+...|++++|+++|.+
T Consensus 125 ~~~~~~~~~~~A~~~~~~ 142 (166)
T 1a17_A 125 NKIVKQKAFERAIAGDEH 142 (166)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccc
Confidence 335555666666665543
No 325
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=96.49 E-value=0.011 Score=61.61 Aligned_cols=55 Identities=13% Similarity=0.111 Sum_probs=35.9
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHh
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEA 76 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a 76 (1074)
.+.+.|++++|+..|+++-..... +...+..+.+.|..+...|+|++|+.+|.++
T Consensus 13 ~~~~~g~~~~A~~~~~~~~~~~p~-----------------~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~ 67 (225)
T 2yhc_A 13 QKLQDGNWRQAITQLEALDNRYPF-----------------GPYSQQVQLDLIYAYYKNADLPLAQAAIDRF 67 (225)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTT-----------------STTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCC-----------------ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 356678888888888876532100 0111456777788888888888888887774
No 326
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=96.49 E-value=0.0094 Score=58.48 Aligned_cols=80 Identities=16% Similarity=0.076 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHhhCh--------hhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhc
Q psy14927 52 LLKWWAQYIESTEDMDLAMKYYEEARDY--------LSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENS 118 (1074)
Q Consensus 52 l~~~~a~~~e~~~~~~~A~~~y~~a~d~--------~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~ 118 (1074)
.+...|..+...|+|++|+++|.++=.. ..+..+|..+|++++|.+..+ .+.+..+.+.+|..|...
T Consensus 13 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 92 (164)
T 3sz7_A 13 KLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDM 92 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 3444444444555555555555443221 223333444555555544433 245678889999999999
Q ss_pred CChHHHHHHHHHh
Q psy14927 119 GQFDEAIHFYSVA 131 (1074)
Q Consensus 119 g~~~~Ai~~y~~a 131 (1074)
|++++|+++|.++
T Consensus 93 g~~~~A~~~~~~a 105 (164)
T 3sz7_A 93 ADYKGAKEAYEKG 105 (164)
T ss_dssp TCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHH
Confidence 9999999988764
No 327
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=96.47 E-value=0.12 Score=49.01 Aligned_cols=93 Identities=13% Similarity=0.058 Sum_probs=66.9
Q ss_pred hHHHHHHHHHHccCCHHHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhhcCC
Q psy14927 253 ELLKSIISFYSKGKAPHLLANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEIDEFGN 332 (1074)
Q Consensus 253 ~~~~~i~~~Y~k~~~~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (1074)
..++.++.++...+.....+..+...+... ...|+|++|...+.+++....+.+.... .......+..++.. .|+
T Consensus 70 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~A~~~~~~a~~~~~~~~~~~~---~~~~~~~la~~~~~-~g~ 144 (164)
T 3ro3_A 70 EYYKKTLLLARQLKDRAVEAQSCYSLGNTY-TLLQDYEKAIDYHLKHLAIAQELKDRIG---EGRACWSLGNAYTA-LGN 144 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHTTCHHH---HHHHHHHHHHHHHH-HTC
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHccchHh---HHHHHHHHHHHHHH-ccC
Confidence 444455555555566666677777888887 8899999999999999999887664211 22233345677777 799
Q ss_pred hHHHhhHHHHHHHHHhhc
Q psy14927 333 YEKGLGALNEAKRCLLKH 350 (1074)
Q Consensus 333 ~~~a~~~~~~~~~~~~~~ 350 (1074)
++.|...+.++-...++.
T Consensus 145 ~~~A~~~~~~a~~~~~~~ 162 (164)
T 3ro3_A 145 HDQAMHFAEKHLEISREV 162 (164)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999887765544
No 328
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=96.46 E-value=0.0027 Score=72.76 Aligned_cols=46 Identities=17% Similarity=0.213 Sum_probs=34.7
Q ss_pred HHHHhhhCCeEEEee-eEEEec--CCeEEEEeCCCCeeEEEcCeEEEccCCC
Q psy14927 848 IAHLFKSNKVTQLNG-HGKITG--PNTVTVIKSDGSTEEVKTKNILIATGSE 896 (1074)
Q Consensus 848 ~~~~l~~~gV~~~~g-~v~~id--~~~~~v~~~~G~~~~i~~d~lIIATG~~ 896 (1074)
+.+.+.+.|++++.+ .|+.+. .+.+.|.+.+| ++.+|.||+|||..
T Consensus 159 l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g---~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 159 LFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG---TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC---EEEEEEEEECCGGG
T ss_pred HHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC---EEEcCEEEEcCCcC
Confidence 445556779999998 577664 44566766655 69999999999986
No 329
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.46 E-value=0.0048 Score=74.12 Aligned_cols=56 Identities=14% Similarity=0.380 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCc
Q psy14927 950 VAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRR 1009 (1074)
Q Consensus 950 ~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~ 1009 (1074)
+...+.+.+.+. +++++++++++.+++++.+++.+.. +|+..++.+|.||.|.|..
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~-~G~~~~i~a~~vVgADG~~ 195 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLR-TGATRAVHARYLVACDGAS 195 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECC-CCCEEEEEeCEEEECCCCC
Confidence 445566666665 8899999999987777888877622 2444689999999998864
No 330
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.46 E-value=0.0017 Score=72.52 Aligned_cols=90 Identities=13% Similarity=0.083 Sum_probs=61.6
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEec
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITG 868 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id 868 (1074)
++|+|||||+.|+..|..|++ ++++..+.... . ......+.+.+++.||+++.+ .++.++
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~---------~-----~~~~~~l~~~l~~~gv~v~~~~~v~~i~ 218 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA---------H-----EASVKELMKAHEEGRLEVLTPYELRRVE 218 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS---------C-----HHHHHHHHHHHHTTSSEEETTEEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc---------c-----HHHHHHHHhccccCCeEEecCCcceeEc
Confidence 349999999999999999987 44444332211 0 112233556677789999999 577775
Q ss_pred CCe--EEEEeC---CCCeeEEEcCeEEEccCCCCC
Q psy14927 869 PNT--VTVIKS---DGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 869 ~~~--~~v~~~---~G~~~~i~~d~lIIATG~~p~ 898 (1074)
.+. ..|.+. +|+..++.+|.||+|||.+|.
T Consensus 219 ~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 253 (335)
T 2zbw_A 219 GDERVRWAVVFHNQTQEELALEVDAVLILAGYITK 253 (335)
T ss_dssp ESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEE
T ss_pred cCCCeeEEEEEECCCCceEEEecCEEEEeecCCCC
Confidence 431 234444 665568999999999999874
No 331
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=96.45 E-value=0.002 Score=77.91 Aligned_cols=54 Identities=19% Similarity=0.199 Sum_probs=36.9
Q ss_pred hhhhHHHHhhhCCeEEEee-eEEEec--C-CeEE-EEeC------CCCe-------eEEEcCeEEEccCCCC
Q psy14927 844 LTGGIAHLFKSNKVTQLNG-HGKITG--P-NTVT-VIKS------DGST-------EEVKTKNILIATGSEV 897 (1074)
Q Consensus 844 l~~~~~~~l~~~gV~~~~g-~v~~id--~-~~~~-v~~~------~G~~-------~~i~~d~lIIATG~~p 897 (1074)
+...+.+.+...||+++.| .|+.+. . ..+. |.+. +|.. .++.+|+||+|+|...
T Consensus 146 l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 146 LVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 3344666677789999999 466653 2 2333 5554 3421 5799999999999975
No 332
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=96.44 E-value=0.012 Score=70.63 Aligned_cols=106 Identities=12% Similarity=0.004 Sum_probs=82.6
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhC-------
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARD------- 78 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d------- 78 (1074)
+...|++++|+..|+++-..+ ++++..+..+|..+...|++++|.++|.++=.
T Consensus 33 ~~~~g~~~~A~~~~~~al~~~--------------------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 92 (568)
T 2vsy_A 33 ELGMGDTTAGEMAVQRGLALH--------------------PGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPG 92 (568)
T ss_dssp HHHHTCHHHHHHHHHHHHTTS--------------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHcCCHHHHHHHHHHHHHhC--------------------CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHH
Confidence 344566666666666665333 35678889999999999999999999998632
Q ss_pred -hhhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhc---CChHHHHHHHHHh
Q psy14927 79 -YLSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENS---GQFDEAIHFYSVA 131 (1074)
Q Consensus 79 -~~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~---g~~~~Ai~~y~~a 131 (1074)
+..+..++..+|++++|.+..++ +.+..+...+|..+... |++++|+++|.++
T Consensus 93 ~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~a 154 (568)
T 2vsy_A 93 IALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAA 154 (568)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHH
Confidence 24566678899999999887763 46778888999999999 9999999987765
No 333
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=96.44 E-value=0.012 Score=55.24 Aligned_cols=99 Identities=20% Similarity=0.246 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHH
Q psy14927 51 VLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSV 130 (1074)
Q Consensus 51 ~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~ 130 (1074)
.-++.+|..+...|+|++|+++|.+|=+. .+.+..+.+.+|..|.+.|++++|++.|.+
T Consensus 9 ~a~~~lG~~~~~~~~~~~A~~~y~~Al~~---------------------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~ 67 (127)
T 4gcn_A 9 IAEKDLGNAAYKQKDFEKAHVHYDKAIEL---------------------DPSNITFYNNKAAVYFEEKKFAECVQFCEK 67 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------------------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHH
Confidence 35677899999999999999999876322 345667788999999999999999998754
Q ss_pred hCChHHHHHHHHHhCchHHHHHHhhhcCchhHHHHHHHHcc-CChhHHHHHHHH
Q psy14927 131 AGSCGNAVRLCKEQALDDQLWNLALSAGPSEQIEAATYLET-IEPDKAVLLYHK 183 (1074)
Q Consensus 131 a~~~~~A~~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~-~~~~~A~~ly~k 183 (1074)
|+++...+...-.. ++ ..+...|..++. +++++|+..|.+
T Consensus 68 ------al~~~~~~~~~~~~--~a-----~~~~~lg~~~~~~~~~~~A~~~~~k 108 (127)
T 4gcn_A 68 ------AVEVGRETRADYKL--IA-----KAMSRAGNAFQKQNDLSLAVQWFHR 108 (127)
T ss_dssp ------HHHHHHHTTCCHHH--HH-----HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ------HHHhCcccchhhHH--HH-----HHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 55554443211000 00 123345555555 556666666654
No 334
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.41 E-value=0.0028 Score=70.56 Aligned_cols=31 Identities=16% Similarity=0.216 Sum_probs=25.8
Q ss_pred hhhhhhccccchHHHHHHHhh-------hhhhhccccc
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-------KLFTQAGDKG 825 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g 825 (1074)
.+|+||||||+|+.+|+.|++ +++|+.+..+
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G 117 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG 117 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC
Confidence 349999999999999999987 5778776555
No 335
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.41 E-value=0.0022 Score=72.52 Aligned_cols=96 Identities=17% Similarity=0.161 Sum_probs=61.1
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccc-cchhhhhhhhhHHHhhhhhhHHHHhhhCC-eEEEee-eEEE
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVK-LNLETMMGTKSAAVKALTGGIAHLFKSNK-VTQLNG-HGKI 866 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~-~~~~~~~~~~~~~~~~l~~~~~~~l~~~g-V~~~~g-~v~~ 866 (1074)
++|+|||||+.|+..|..|++ ++++..+..... ++.. . .....+...+.+.+++.| |+++.+ .++.
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~-~-----~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~ 240 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPS-V-----RLSPYTRQRLGNVIKQGARIEMNVHYTVKD 240 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CT-T-----SCCHHHHHHHHHHHHTTCCEEEECSCCEEE
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCC-c-----cCCHHHHHHHHHHHhhCCcEEEecCcEEEE
Confidence 349999999999999999987 455444322110 0000 0 001122334566677786 999998 5777
Q ss_pred e--cCCeEEEEeCCCCeeEEE-cCeEEEccCCCCC
Q psy14927 867 T--GPNTVTVIKSDGSTEEVK-TKNILIATGSEVT 898 (1074)
Q Consensus 867 i--d~~~~~v~~~~G~~~~i~-~d~lIIATG~~p~ 898 (1074)
+ +.+...|.+.+| .++. +|.||+|||..|.
T Consensus 241 i~~~~~~~~v~~~~g--~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 241 IDFNNGQYHISFDSG--QSVHTPHEPILATGFDAT 273 (369)
T ss_dssp EEEETTEEEEEESSS--CCEEESSCCEECCCBCGG
T ss_pred EEecCCceEEEecCC--eEeccCCceEEeeccCCc
Confidence 7 556667778888 3454 6999999999874
No 336
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.40 E-value=0.0039 Score=74.19 Aligned_cols=45 Identities=22% Similarity=0.259 Sum_probs=33.9
Q ss_pred CCeeeCCCCC------CCCCCEEEecccCCCC--------CcHHHHHHHHHHHHHHhhC
Q psy14927 1028 GRVPVNSRFQ------TVIPNIFAIGDCIHGP--------MLAHKAEDEGIVCVEGIAG 1072 (1074)
Q Consensus 1028 G~I~Vd~~~~------ts~~~IyAiGD~~~~~--------~~~~~A~~~G~~aA~~I~~ 1072 (1074)
|.|.||+..| +.+||+||+|.++++. .....|+--|++|++++++
T Consensus 450 GGl~~d~~~~Vl~~~g~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~ 508 (510)
T 4at0_A 450 GGLRTTVNSEVLHVSGEPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAK 508 (510)
T ss_dssp CEECBCTTCEEEBTTSSEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred cCeeECCCCceECCCCCCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHh
Confidence 5566666666 6789999999987631 1345688899999999875
No 337
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.35 E-value=0.0029 Score=75.80 Aligned_cols=49 Identities=6% Similarity=0.062 Sum_probs=37.1
Q ss_pred HHHHhhhCCeEEEeeeEEEecC--C--eEEEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 848 IAHLFKSNKVTQLNGHGKITGP--N--TVTVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 848 ~~~~l~~~gV~~~~g~v~~id~--~--~~~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
+.+.+...||+++.++|+.+.. + ...|++.+| .++.+|.||+|+|....
T Consensus 171 L~~~a~~~gv~~~~~~v~~i~~~~~g~~~~v~~~~g--~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 171 LKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEG--RTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHTTCEEEECCEEEEEECTTSCEEEEEETTS--CEECCSEEEECCGGGCC
T ss_pred HHHHHHHCCCEEEEeeEeEEEEcCCCcEEEEEECCC--cEEEeCEEEECCCCchh
Confidence 4455566899999998887753 2 246777777 57999999999998753
No 338
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=96.35 E-value=0.02 Score=53.72 Aligned_cols=85 Identities=19% Similarity=0.086 Sum_probs=69.9
Q ss_pred CCChHHHHHHHHHHHhccCHHHHHHHHHHhhC--------hhhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHH
Q psy14927 47 SKDPVLLKWWAQYIESTEDMDLAMKYYEEARD--------YLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLAR 113 (1074)
Q Consensus 47 ~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d--------~~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~ 113 (1074)
..++..+...|..+...|+|++|..+|.++=. +..+..++..+|++++|....+ .+.+..+.+.+|.
T Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 85 (137)
T 3q49_B 6 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 85 (137)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHH
Confidence 45678888999999999999999999998533 3455666888999999988766 3567788999999
Q ss_pred HHHhcCChHHHHHHHHHh
Q psy14927 114 QYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 114 ~~~~~g~~~~Ai~~y~~a 131 (1074)
.|...|++++|+++|.++
T Consensus 86 ~~~~~~~~~~A~~~~~~a 103 (137)
T 3q49_B 86 CQLEMESYDEAIANLQRA 103 (137)
T ss_dssp HHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHH
Confidence 999999999999987654
No 339
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.34 E-value=0.0025 Score=70.18 Aligned_cols=87 Identities=18% Similarity=0.190 Sum_probs=58.1
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEec
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITG 868 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id 868 (1074)
++|+|||+|+.|+..|..+++ ++++..+.. .. .. ......+++.||+|+.+ .++.++
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~---------~~-~~-------~~~~~~~~~~gv~~~~~~~v~~i~ 210 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF---------RA-AP-------STVEKVKKNEKIELITSASVDEVY 210 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC---------BS-CH-------HHHHHHHHCTTEEEECSCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC---------CC-CH-------HHHHHHHhcCCeEEEeCcEEEEEE
Confidence 349999999999999999988 333333222 00 01 11233446789999988 566665
Q ss_pred CCe-----EEEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 869 PNT-----VTVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 869 ~~~-----~~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
.+. +.+...+|+..++.+|.||+|||..|.
T Consensus 211 ~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~ 245 (315)
T 3r9u_A 211 GDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVR 245 (315)
T ss_dssp EETTEEEEEEEECTTSCEEEECCSCEEECSCEEEC
T ss_pred cCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCC
Confidence 432 333334775568999999999999874
No 340
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=96.33 E-value=0.0033 Score=75.65 Aligned_cols=62 Identities=10% Similarity=0.055 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeE-EEEEeeccCCCCceEEEcCEEEEccCCc
Q psy14927 947 DGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNI-TVTIENVKDPTKKEELSCDALLVCVGRR 1009 (1074)
Q Consensus 947 ~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~~~~i~~D~vi~a~G~~ 1009 (1074)
+..+...+.+.+.+.|++++.+++|+++..+++++ .|++.+.. +|++.++.+|.||.|+|.-
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~-tg~~~~i~A~~VV~AaG~~ 231 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRL-TDTTHTIYAKKVVNAAGPW 231 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETT-TCCEEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcC-CCceEEEECCEEEECCCcc
Confidence 35566677777888999999999999998876663 47766533 4556789999999999964
No 341
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=96.27 E-value=0.023 Score=57.85 Aligned_cols=78 Identities=14% Similarity=0.135 Sum_probs=63.9
Q ss_pred HHHHHHHHhccCHHHHHHHHHHhhC-----hhhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChHH
Q psy14927 54 KWWAQYIESTEDMDLAMKYYEEARD-----YLSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFDE 123 (1074)
Q Consensus 54 ~~~a~~~e~~~~~~~A~~~y~~a~d-----~~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~~ 123 (1074)
...|..+...|++++|.++|.++-+ +..+..++..+|++++|.+..+. +.+..+.+.+|..|...|++++
T Consensus 10 ~~~g~~~~~~~~~~~A~~~~~~a~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~ 89 (213)
T 1hh8_A 10 WNEGVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDL 89 (213)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHH
Confidence 3458888899999999999998754 34455668889999999887763 5677888899999999999999
Q ss_pred HHHHHHHh
Q psy14927 124 AIHFYSVA 131 (1074)
Q Consensus 124 Ai~~y~~a 131 (1074)
|++.|.++
T Consensus 90 A~~~~~~a 97 (213)
T 1hh8_A 90 AIKDLKEA 97 (213)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987653
No 342
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=96.26 E-value=0.015 Score=63.04 Aligned_cols=86 Identities=16% Similarity=0.084 Sum_probs=60.2
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhH
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRV 85 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~ 85 (1074)
+...|++++|+..|+++-..+ ++++.++..+|..+...|++++|.++|.++-..
T Consensus 14 ~~~~g~~~~A~~~~~~al~~~--------------------p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~------ 67 (281)
T 2c2l_A 14 LFVGRKYPEAAACYGRAITRN--------------------PLVAVYYTNRALCYLKMQQPEQALADCRRALEL------ 67 (281)
T ss_dssp HHHTTCHHHHHHHHHHHHHHC--------------------SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS------
T ss_pred HHHcCCHHHHHHHHHHHHHhC--------------------CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------
Confidence 455666777776666654222 344666677777777777777777776665443
Q ss_pred hhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHHhC
Q psy14927 86 LCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVAG 132 (1074)
Q Consensus 86 l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~ 132 (1074)
.+.+..+.+.+|..|...|++++|++.|.++-
T Consensus 68 ---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 99 (281)
T 2c2l_A 68 ---------------DGQSVKAHFFLGQCQLEMESYDEAIANLQRAY 99 (281)
T ss_dssp ---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ---------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 23566788899999999999999999987653
No 343
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=96.23 E-value=0.019 Score=51.57 Aligned_cols=87 Identities=18% Similarity=0.145 Sum_probs=59.0
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhH
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRV 85 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~ 85 (1074)
+...|++++|+.+|+++-..+ +.++..+..+|..+...|++++|..+|.++-..
T Consensus 14 ~~~~~~~~~A~~~~~~~~~~~--------------------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------ 67 (118)
T 1elw_A 14 ALSVGNIDDALQCYSEAIKLD--------------------PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDL------ 67 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHHHC--------------------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------
T ss_pred HHHcccHHHHHHHHHHHHHHC--------------------CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHh------
Confidence 345566666666666654221 234667777777777777777777776654332
Q ss_pred hhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHHhCC
Q psy14927 86 LCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVAGS 133 (1074)
Q Consensus 86 l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~ 133 (1074)
.+.+....+.+|..+...|++++|+++|.++-.
T Consensus 68 ---------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 68 ---------------KPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp ---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred ---------------CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 134566788999999999999999998876543
No 344
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.23 E-value=0.0048 Score=67.87 Aligned_cols=86 Identities=16% Similarity=0.158 Sum_probs=57.4
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhh-CCeEEEee-eEEEe
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKS-NKVTQLNG-HGKIT 867 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~-~gV~~~~g-~v~~i 867 (1074)
++|+|||||+.|+..|..|++ ++++..+... . . ..+.+.+.. .||+++.+ +++.+
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~--------~--------~~~~~~l~~~~gv~v~~~~~v~~i 206 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK--A--------D--------QVLQDKLRSLKNVDIILNAQTTEV 206 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC--S--------C--------HHHHHHHHTCTTEEEESSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC--c--------c--------HHHHHHHhhCCCeEEecCCceEEE
Confidence 349999999999999999987 4444433221 0 0 112334455 69999998 57766
Q ss_pred cCC--eE-EEEeC---CCCeeEEEcCeEEEccCCCCC
Q psy14927 868 GPN--TV-TVIKS---DGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 868 d~~--~~-~v~~~---~G~~~~i~~d~lIIATG~~p~ 898 (1074)
+.+ .+ .|.+. +|+..++.+|.||+|||..|.
T Consensus 207 ~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 243 (310)
T 1fl2_A 207 KGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPN 243 (310)
T ss_dssp EESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEES
T ss_pred EcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccC
Confidence 543 22 34443 454467999999999999874
No 345
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=96.23 E-value=0.046 Score=56.08 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=45.4
Q ss_pred ChHHHHHHHHHHHhccCHHHHHHHHHHhhChh-hhhhHhhc--cCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHH
Q psy14927 49 DPVLLKWWAQYIESTEDMDLAMKYYEEARDYL-SMVRVLCF--LQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAI 125 (1074)
Q Consensus 49 ~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~-~~vr~l~~--~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai 125 (1074)
+..-+...|..+...|++++|..+|.++=..+ .-...+.. ...- ........+.+|..|.+.|++++|+
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~ 74 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKN--------SEISSKLATELALAYKKNRNYDKAY 74 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTT--------SHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcch--------hhhhHHHHHHHHHHHHHCCCHHHHH
Confidence 34455666788888999999999998864431 11111110 0000 0001223445899999999999999
Q ss_pred HHHHH
Q psy14927 126 HFYSV 130 (1074)
Q Consensus 126 ~~y~~ 130 (1074)
++|.+
T Consensus 75 ~~~~~ 79 (208)
T 3urz_A 75 LFYKE 79 (208)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98865
No 346
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=96.22 E-value=0.0012 Score=76.52 Aligned_cols=53 Identities=9% Similarity=0.174 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCc
Q psy14927 950 VAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRR 1009 (1074)
Q Consensus 950 ~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~ 1009 (1074)
....+.......+.++++++.|++|..+++++.|++.+ + ++.+|.||++++..
T Consensus 205 ~~~l~~~l~~~l~~~v~~~~~V~~i~~~~~~v~v~~~~------g-~~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 205 TQAMFEHLNATLEHPAERNVDITRITREDGKVHIHTTD------W-DRESDVLVLTVPLE 257 (424)
T ss_dssp HHHHHHHHHHHSSSCCBCSCCEEEEECCTTCEEEEESS------C-EEEESEEEECSCHH
T ss_pred HHHHHHHHHHhhcceEEcCCEEEEEEEECCEEEEEECC------C-eEEcCEEEECCCHH
Confidence 34444444555567889999999998876666665433 2 38999999998864
No 347
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.22 E-value=0.0033 Score=69.58 Aligned_cols=86 Identities=10% Similarity=0.078 Sum_probs=57.5
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEec
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITG 868 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id 868 (1074)
++|+|||||+.|+..|..+++ ++++..+... . . ..+.+.+.+.||+++.+ +++.++
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~---------~-~--------~~l~~~l~~~gv~i~~~~~v~~i~ 217 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM---------C-E--------NAYVQEIKKRNIPYIMNAQVTEIV 217 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC---------S-C--------HHHHHHHHHTTCCEECSEEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC---------C-C--------HHHHHHHhcCCcEEEcCCeEEEEe
Confidence 349999999999999999987 3443332221 0 0 11334455789999998 577665
Q ss_pred CCe---EEEEeC---CCCeeEEEcCeEEEccCCCCC
Q psy14927 869 PNT---VTVIKS---DGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 869 ~~~---~~v~~~---~G~~~~i~~d~lIIATG~~p~ 898 (1074)
.+. ..+.+. +|+..++.+|.||+|||..|.
T Consensus 218 ~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 253 (319)
T 3cty_A 218 GDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQ 253 (319)
T ss_dssp ESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEEC
T ss_pred cCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccC
Confidence 431 234443 665457999999999999874
No 348
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=96.20 E-value=0.025 Score=51.83 Aligned_cols=61 Identities=16% Similarity=0.064 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHH
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYS 129 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~ 129 (1074)
+..+..+|..+...|++++|.++|.++-.. .+.+....+.+|..|...|++++|+++|.
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 104 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAICI---------------------DPAYSKAYGRMGLALSSLNKHVEAVAYYK 104 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHhc---------------------CccCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 444555555555555555555555443211 23456678899999999999999998876
Q ss_pred Hh
Q psy14927 130 VA 131 (1074)
Q Consensus 130 ~a 131 (1074)
++
T Consensus 105 ~~ 106 (131)
T 2vyi_A 105 KA 106 (131)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 349
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=96.16 E-value=0.32 Score=52.43 Aligned_cols=83 Identities=12% Similarity=-0.050 Sum_probs=61.7
Q ss_pred CCHHHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhhcCC-hHHHhhHHHHHH
Q psy14927 266 KAPHLLANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEIDEFGN-YEKGLGALNEAK 344 (1074)
Q Consensus 266 ~~~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~~ 344 (1074)
+.....+..+..++..- .+.|+|++|...+.+|++...+.+.... .......+..+|.+ .|+ ++.|+..+.++-
T Consensus 190 ~~~~~~~~~~~nlg~~y-~~~~~y~~A~~~~~~al~~~~~~~~~~~---~~~~~~~lg~~~~~-~g~~~~~A~~~~~~Al 264 (293)
T 3u3w_A 190 DNEEFDVKVRYNHAKAL-YLDSRYEESLYQVNKAIEISCRINSMAL---IGQLYYQRGECLRK-LEYEEAEIEDAYKKAS 264 (293)
T ss_dssp CCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHTTBCTT---HHHHHHHHHHHHHH-TTCCHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHcCcHHH---HHHHHHHHHHHHHH-hCCcHHHHHHHHHHHH
Confidence 34555667788888887 8899999999999999998887765332 12233345667777 685 599999999998
Q ss_pred HHHhhccCc
Q psy14927 345 RCLLKHNDS 353 (1074)
Q Consensus 345 ~~~~~~~~~ 353 (1074)
...+.....
T Consensus 265 ~i~~~~~~~ 273 (293)
T 3u3w_A 265 FFFDILEMH 273 (293)
T ss_dssp HHHHHTTCT
T ss_pred HHHHHhCCH
Confidence 887766653
No 350
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=96.14 E-value=0.12 Score=53.48 Aligned_cols=72 Identities=8% Similarity=0.035 Sum_probs=47.1
Q ss_pred HHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhhcCChHHHhhHHHHHHHHHhhcc
Q psy14927 272 ANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEIDEFGNYEKGLGALNEAKRCLLKHN 351 (1074)
Q Consensus 272 a~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 351 (1074)
+......+..- ..-|+|..|...+..+++..... + ........+...+.+ .|+++.|+..+.++.. ..|
T Consensus 147 ~~~~~~~a~~~-~~~~~~~~A~~~~~~~l~~~p~~----~--~~~~a~~~l~~~~~~-~g~~~~A~~~~~~l~~---~~~ 215 (225)
T 2yhc_A 147 AKYEYSVAEYY-TERGAWVAVVNRVEGMLRDYPDT----Q--ATRDALPLMENAYRQ-MQMNAQAEKVAKIIAA---NSS 215 (225)
T ss_dssp HHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHSTTS----H--HHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH---CCS
T ss_pred HHHHHHHHHHH-HHcCcHHHHHHHHHHHHHHCcCC----C--ccHHHHHHHHHHHHH-cCCcHHHHHHHHHHHh---hCC
Confidence 33334555555 66899999999988877765432 1 111233355677778 7999999998886654 466
Q ss_pred Ccc
Q psy14927 352 DSM 354 (1074)
Q Consensus 352 ~~~ 354 (1074)
+++
T Consensus 216 ~~~ 218 (225)
T 2yhc_A 216 NTL 218 (225)
T ss_dssp CCC
T ss_pred Cch
Confidence 543
No 351
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.13 E-value=0.0054 Score=68.04 Aligned_cols=87 Identities=17% Similarity=0.145 Sum_probs=57.0
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEec
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITG 868 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id 868 (1074)
++|+|||||+.|+..|..+++ ++++..+.... .. .+ .....+..||+++.+ .++.++
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------~~----~~---~~~l~~~~gv~i~~~~~v~~i~ 215 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA----------NK----VA---QARAFANPKMKFIWDTAVEEIQ 215 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS----------CH----HH---HHHHHTCTTEEEECSEEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc----------ch----HH---HHHHHhcCCceEecCCceEEEc
Confidence 349999999999999999987 44444332210 00 11 122233469999998 577765
Q ss_pred CCe--EEEEeC---CCCeeEEEcCeEEEccCCCCC
Q psy14927 869 PNT--VTVIKS---DGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 869 ~~~--~~v~~~---~G~~~~i~~d~lIIATG~~p~ 898 (1074)
.+. ..|.+. +|+..++.+|.||+|||.+|.
T Consensus 216 ~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 250 (325)
T 2q7v_A 216 GADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPN 250 (325)
T ss_dssp ESSSEEEEEEEETTTCCEEEEECSEEEECSCEEES
T ss_pred cCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCC
Confidence 431 234443 665558999999999999874
No 352
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.12 E-value=0.0045 Score=74.04 Aligned_cols=43 Identities=16% Similarity=0.248 Sum_probs=34.9
Q ss_pred hhhCCeEEE---eeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 852 FKSNKVTQL---NGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 852 l~~~gV~~~---~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
+.+.||+++ ...+..++++. |.+++| .++++|.||+|||..+.
T Consensus 340 l~~~nV~lv~~~~~~I~~it~~g--v~~~dG--~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 340 YNRPNVEAVAIKENPIREVTAKG--VVTEDG--VLHELDVLVFATGFDAV 385 (540)
T ss_dssp GGSTTEEEEETTTSCEEEECSSE--EEETTC--CEEECSEEEECCCBSCS
T ss_pred hcCCCEEEEeCCCCCccEEecCe--EEcCCC--CEEECCEEEECCccCcc
Confidence 446799999 56788888875 567888 67999999999999874
No 353
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.11 E-value=0.0093 Score=54.94 Aligned_cols=86 Identities=12% Similarity=0.024 Sum_probs=62.4
Q ss_pred hcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhh
Q psy14927 8 KNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLC 87 (1074)
Q Consensus 8 ~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~ 87 (1074)
++|++++|+.+|+++-.....-|. ++..+..+|..+...|++++|.++|.++-..
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-----------------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-------- 56 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-----------------LAECYLGLGSTFRTLGEYRKAEAVLANGVKQ-------- 56 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-----------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-----------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------
Confidence 468999999999998754211122 2667888899999999999999999764332
Q ss_pred ccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 88 FLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 88 ~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
.+.+..+.+.+|..+...|++++|+++|.++
T Consensus 57 -------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 87 (117)
T 3k9i_A 57 -------------FPNHQALRVFYAMVLYNLGRYEQGVELLLKI 87 (117)
T ss_dssp -------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred -------------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3456778889999999999999999987654
No 354
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=96.09 E-value=0.036 Score=63.15 Aligned_cols=100 Identities=9% Similarity=0.077 Sum_probs=78.9
Q ss_pred hhhcCC-HHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhC------
Q psy14927 6 TMKNGD-IDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARD------ 78 (1074)
Q Consensus 6 ~~~~g~-~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d------ 78 (1074)
+...|+ +++|+..|+++-..+ ++++..|..+|..+...|++++|+.+|.++=.
T Consensus 141 l~~~g~d~~eAl~~~~~al~l~--------------------P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~ 200 (382)
T 2h6f_A 141 LKSLQKDLHEEMNYITAIIEEQ--------------------PKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNY 200 (382)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHC--------------------TTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred HHHcccCHHHHHHHHHHHHHHC--------------------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCH
Confidence 455675 888888887766333 45688999999999999999999999998643
Q ss_pred --hhhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHh-cCChHHHH
Q psy14927 79 --YLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYEN-SGQFDEAI 125 (1074)
Q Consensus 79 --~~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~-~g~~~~Ai 125 (1074)
|.....+|..+|++++|.+..+ .+.+..+.+.+|..+.. .|..++|+
T Consensus 201 ~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~ 255 (382)
T 2h6f_A 201 HAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAV 255 (382)
T ss_dssp HHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchHHH
Confidence 3456667889999999988766 46788899999999998 55558875
No 355
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.09 E-value=0.0061 Score=69.84 Aligned_cols=40 Identities=15% Similarity=0.042 Sum_probs=30.7
Q ss_pred CeEEEee-eEEEe---cCCeEEEEeCCCCeeEEEcCeEEEccCCCC
Q psy14927 856 KVTQLNG-HGKIT---GPNTVTVIKSDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 856 gV~~~~g-~v~~i---d~~~~~v~~~~G~~~~i~~d~lIIATG~~p 897 (1074)
+.++.+| +++.+ +...++|+++|| .++++|.||-|-|.+.
T Consensus 123 ~~~v~~~~~v~~~~~~~~~~v~v~~~dG--~~~~adlvVgADG~~S 166 (412)
T 4hb9_A 123 ANTIQWNKTFVRYEHIENGGIKIFFADG--SHENVDVLVGADGSNS 166 (412)
T ss_dssp TTTEECSCCEEEEEECTTSCEEEEETTS--CEEEESEEEECCCTTC
T ss_pred cceEEEEEEEEeeeEcCCCeEEEEECCC--CEEEeeEEEECCCCCc
Confidence 4567777 45554 345688999999 6899999999999875
No 356
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.08 E-value=0.0036 Score=76.60 Aligned_cols=53 Identities=13% Similarity=0.115 Sum_probs=36.9
Q ss_pred hhhHHHHhhhCCe--EEEee-eEEEecCC------eEEEEeC------CCCeeEEEcCeEEEccCCCC
Q psy14927 845 TGGIAHLFKSNKV--TQLNG-HGKITGPN------TVTVIKS------DGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 845 ~~~~~~~l~~~gV--~~~~g-~v~~id~~------~~~v~~~------~G~~~~i~~d~lIIATG~~p 897 (1074)
...+.+.+.+.|+ +++.+ +++.+..+ .++|++. +|...++++|+||.|+|.+.
T Consensus 144 ~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 144 HDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp HHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch
Confidence 3345666777776 88888 46665421 3666654 46556899999999999975
No 357
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=96.06 E-value=0.023 Score=54.90 Aligned_cols=82 Identities=20% Similarity=0.127 Sum_probs=66.3
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhhCh--------hhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHH
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEARDY--------LSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYE 116 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~--------~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~ 116 (1074)
...+...|..+...|++++|.++|.++-.. ..+..++..+|++++|.+..+. +.+..+.+.+|..+.
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~ 92 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 92 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 556777899999999999999999986432 3455668889999999887662 456778889999999
Q ss_pred hcCChHHHHHHHHHh
Q psy14927 117 NSGQFDEAIHFYSVA 131 (1074)
Q Consensus 117 ~~g~~~~Ai~~y~~a 131 (1074)
..|++++|+++|.++
T Consensus 93 ~~~~~~~A~~~~~~a 107 (166)
T 1a17_A 93 ALGKFRAALRDYETV 107 (166)
T ss_dssp HTTCHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHH
Confidence 999999999887653
No 358
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.03 E-value=0.0079 Score=74.31 Aligned_cols=93 Identities=15% Similarity=0.066 Sum_probs=64.8
Q ss_pred hhhhhhc--cccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEE
Q psy14927 795 QVVLNTL--GNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKI 866 (1074)
Q Consensus 795 ~~VviiG--gG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~ 866 (1074)
++|+||| ||+.|+..|..+++ ++++..+....... .......+.+.+++.||+++.+ +|+.
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~-----------~~~~~~~l~~~l~~~GV~i~~~~~V~~ 592 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTN-----------NTFEVNRIQRRLIENGVARVTDHAVVA 592 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGG-----------GGTCHHHHHHHHHHTTCEEEESEEEEE
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccc-----------cchhHHHHHHHHHHCCCEEEcCcEEEE
Confidence 3499999 99999999999988 34433332211110 0122334567778889999999 6888
Q ss_pred ecCCeEEEEeC-CCCeeEEEcCeEEEccCCCCC
Q psy14927 867 TGPNTVTVIKS-DGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 867 id~~~~~v~~~-~G~~~~i~~d~lIIATG~~p~ 898 (1074)
++.+...+... +|+..++.+|.||+|||.+|.
T Consensus 593 i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 593 VGAGGVTVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp EETTEEEEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred EECCeEEEEEccCCeEEEEECCEEEECCCCCCC
Confidence 88877766542 344478999999999999874
No 359
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=95.98 E-value=0.011 Score=68.82 Aligned_cols=55 Identities=18% Similarity=0.326 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEe---------------cCCeE-EEEEeeccCCCCceEE--EcCEEEEccCCc
Q psy14927 948 GEVAKQFQRILGKQGMQFKLGTKVTGASK---------------SGDNI-TVTIENVKDPTKKEEL--SCDALLVCVGRR 1009 (1074)
Q Consensus 948 ~~~~~~~~~~l~~~gV~i~~~~~v~~i~~---------------~~~~~-~v~~~~~~~~g~~~~i--~~D~vi~a~G~~ 1009 (1074)
..+...+.+.+++.||+++.++.|+++.. +++++ .|.+.+ | ++ .+|.||+|+|.-
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~----g---~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSD----G---TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETT----S---CEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCC----C---EEeecCCEEEECCCcC
Confidence 46778888889999999999999999986 44433 343322 3 57 999999999964
No 360
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.97 E-value=0.0067 Score=67.49 Aligned_cols=87 Identities=11% Similarity=0.127 Sum_probs=57.6
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEec
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITG 868 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id 868 (1074)
++|+|||||+.|+..|..+++ ++++..+.... . ..+ ....+++.||+++.+ .++.++
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~----------~----~~~---~~~~~~~~gv~i~~~~~v~~i~ 222 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA----------S----KIM---QQRALSNPKIDVIWNSSVVEAY 222 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS----------C----HHH---HHHHHTCTTEEEECSEEEEEEE
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc----------c----HHH---HHHHHhCCCeeEecCCceEEEe
Confidence 349999999999999999977 44444332210 0 010 123446789999998 566665
Q ss_pred CCe----E-EEEeC---CCCeeEEEcCeEEEccCCCCC
Q psy14927 869 PNT----V-TVIKS---DGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 869 ~~~----~-~v~~~---~G~~~~i~~d~lIIATG~~p~ 898 (1074)
.+. + .+.+. +|+..++.+|.||+|||.+|.
T Consensus 223 ~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 260 (333)
T 1vdc_A 223 GDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPA 260 (333)
T ss_dssp ESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEES
T ss_pred CCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccc
Confidence 432 2 24443 565568999999999999874
No 361
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=95.96 E-value=0.033 Score=51.44 Aligned_cols=84 Identities=19% Similarity=0.111 Sum_probs=66.7
Q ss_pred CChHHHHHHHHHHHhccCHHHHHHHHHHhhCh--------hhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHH
Q psy14927 48 KDPVLLKWWAQYIESTEDMDLAMKYYEEARDY--------LSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQ 114 (1074)
Q Consensus 48 ~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~--------~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~ 114 (1074)
.++.-+...|..+...|++++|.++|.++-+. ..+..++..+|++++|.+..+. +.+....+.+|..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 93 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAA 93 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 34566777799999999999999999886443 3455667888999999887652 4567788899999
Q ss_pred HHhcCChHHHHHHHHHh
Q psy14927 115 YENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 115 ~~~~g~~~~Ai~~y~~a 131 (1074)
|...|++++|+++|.++
T Consensus 94 ~~~~~~~~~A~~~~~~~ 110 (133)
T 2lni_A 94 LEAMKDYTKAMDVYQKA 110 (133)
T ss_dssp HHHTTCHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHH
Confidence 99999999999988754
No 362
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.93 E-value=0.0015 Score=69.51 Aligned_cols=37 Identities=14% Similarity=0.061 Sum_probs=31.5
Q ss_pred CCCCCCCCCEEEecccCCCCCcHHHHHHHHHHHHHHhh
Q psy14927 1034 SRFQTVIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1034 ~~~~ts~~~IyAiGD~~~~~~~~~~A~~~G~~aA~~I~ 1071 (1074)
+.+.++.++||++||++.++ .+..|+.+|..||..|+
T Consensus 288 ~~~~~~~~~v~l~GDa~~g~-gv~~A~~sG~~aA~~I~ 324 (336)
T 3kkj_A 288 GALSDADLGIYVCGDWCLSG-RVEGAWLSGQEAARRLL 324 (336)
T ss_dssp SSEEETTTTEEECCGGGTTS-SHHHHHHHHHHHHHHHH
T ss_pred cceeeCCCCEEEEecccCCc-CHHHHHHHHHHHHHHHH
Confidence 34556789999999998776 58899999999999986
No 363
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.91 E-value=0.2 Score=57.14 Aligned_cols=89 Identities=10% Similarity=0.033 Sum_probs=61.0
Q ss_pred HHHHHHccCCHHHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhhcCChHHHh
Q psy14927 258 IISFYSKGKAPHLLANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYETLKSSVVEKLAEVEIDEFGNYEKGL 337 (1074)
Q Consensus 258 i~~~Y~k~~~~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 337 (1074)
+.....+...-...+.++...++.. -..|||.+|...|..+......... |..+...+......++.. .+++..|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~al~~~~~~~~--~~~~~~~~~~~~g~~~~~-~~~y~~A~ 236 (434)
T 4b4t_Q 161 LLREFKKLDDKPSLVDVHLLESKVY-HKLRNLAKSKASLTAARTAANSIYC--PTQTVAELDLMSGILHCE-DKDYKTAF 236 (434)
T ss_dssp HHHHHTTSSCSTHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHSCC--CHHHHHHHHHHHHHHTTS-SSCHHHHH
T ss_pred HHHHHHhcccchhHHHHHHHHHHHH-HHhCcHHHHHHHHHHHHHHhhcCCC--chHHHHHHHHHHHHHHHH-HHhHHHHH
Confidence 3333344444445567777888887 8899999999999999887765543 334444444455666666 69999999
Q ss_pred hHHHHHHHHHhhc
Q psy14927 338 GALNEAKRCLLKH 350 (1074)
Q Consensus 338 ~~~~~~~~~~~~~ 350 (1074)
..+.++-......
T Consensus 237 ~~~~~a~~~~~~~ 249 (434)
T 4b4t_Q 237 SYFFESFESYHNL 249 (434)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhh
Confidence 9888876654443
No 364
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=95.91 E-value=0.03 Score=51.76 Aligned_cols=86 Identities=17% Similarity=0.201 Sum_probs=60.4
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCCh---HHHHHHHHHHHhccCHHHHHHHHHHhhChhh
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDP---VLLKWWAQYIESTEDMDLAMKYYEEARDYLS 81 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~ 81 (1074)
.+...|++++|+.+|+++-... ++++ ..+.+.|..+...|++++|..+|.++-+.
T Consensus 11 ~~~~~~~~~~A~~~~~~~~~~~--------------------p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~-- 68 (129)
T 2xev_A 11 DALKNGKYDDASQLFLSFLELY--------------------PNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSR-- 68 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC--------------------SSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred HHHHhCCHHHHHHHHHHHHHHC--------------------CCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHH--
Confidence 3456777777777777654221 1223 67778888888888888888888765332
Q ss_pred hhhHhhccCCHHHHHHHHHhcCC---hHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 82 MVRVLCFLQDFSRAAELANASGD---TAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 82 ~vr~l~~~~~~~~a~~i~~~~~~---~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
.+.+ ..+.+.+|..+...|++++|+++|.++
T Consensus 69 -------------------~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 102 (129)
T 2xev_A 69 -------------------YPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQV 102 (129)
T ss_dssp -------------------CTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -------------------CCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 1123 566789999999999999999987643
No 365
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=95.90 E-value=0.029 Score=66.89 Aligned_cols=57 Identities=11% Similarity=0.206 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHh-CCCEEEeCceEEEEEecCCeE--EEEEeeccCCCCceEEEcCEEEEccCCccc
Q psy14927 948 GEVAKQFQRILGK-QGMQFKLGTKVTGASKSGDNI--TVTIENVKDPTKKEELSCDALLVCVGRRPY 1011 (1074)
Q Consensus 948 ~~~~~~~~~~l~~-~gV~i~~~~~v~~i~~~~~~~--~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~ 1011 (1074)
..+...+.+.+.+ .||+++.+ +|+++..++++. .|++.+ | .++.+|.||.|+|....
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~----g--~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQ----N--GEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESS----S--CEEECSEEEECSGGGCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECC----C--CEEEcCEEEECCCcchH
Confidence 3456677777888 89999999 699998754443 444432 3 35999999999998644
No 366
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=95.90 E-value=0.17 Score=57.35 Aligned_cols=134 Identities=12% Similarity=0.107 Sum_probs=109.8
Q ss_pred cHHHHHHHHHHhhCHHHHHHHHHHcCCHHHHHHHHHhcCCcHH-HHHHHHHHHhcCC--HHHHHHHHHHcCCHHHHHHH-
Q psy14927 639 DMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAA-AYHLARQYENSGQ--FDEAIHFYSVAGSCGNAVRL- 714 (1074)
Q Consensus 639 ~~~~A~~~y~~ag~~~~ai~~~~~~~~~~~a~~v~~~~~~~~~-~~~~A~~~~~~g~--~~~A~~~~~kag~~~~Av~m- 714 (1074)
+.+..+.-.+--|+++.||++..+.+.|-+|+=++-..++.-- .+..-.||.+... --...=..+-.++..+.|.-
T Consensus 145 ~~d~~I~~aLl~Gd~e~AV~~cl~~~r~adAllLA~~gg~el~~~~vq~~Y~~k~~~~~~~~rll~~iv~~n~~d~V~~~ 224 (399)
T 2pm7_A 145 NIEQTISKNLVSGNIKSAVKNSLENDLMMEAMVIALDSNNERLKESVKNAYFAKYGSKSSLSRILYSISKREVDDLVENL 224 (399)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHTTCCHHHHHHB
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHCCChHHHHHHHHhcCHHHHHHHHHHHHHHhcccCchHHHHHHHHHccCHHHHHhcC
Confidence 4455666667779999999999999999999999976666666 5567788888764 44455677888999999988
Q ss_pred -hccHHHHHHHHHHhCCcc---cHHHHHHHHHHHHHcCCHHHHHHHHHHhCCHHHHHHHHHH
Q psy14927 715 -CGQLDAVESIASELNVQS---DQDLILKCASYFARREHHDRAVQMYAIARRYDQALSLIQT 772 (1074)
Q Consensus 715 -a~~w~~a~~~A~~~~~~~---~~~~~~~~a~~~~~~~~~~~Ai~~y~~ag~~~~Ai~~~~~ 772 (1074)
..+|.++.-+.=.+.++. -+.+...+|+.|...|+...|.-||..+|+.+..+.+-..
T Consensus 225 ~l~~WkE~La~i~t~a~~e~~ef~~Lc~~LG~RL~~~g~~~~A~lCYi~Ag~~dk~v~iW~~ 286 (399)
T 2pm7_A 225 DVSQWKFISKAIQNLYPNDIAQRNEMMIKLGDRMKENGHRQDSLTLYLAAGSLDKVASIWLS 286 (399)
T ss_dssp CGGGHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHhcCCccHhHHHHHHHHHHHHHHhCCChhhhhHHHHhhCCHHHHHHHHHH
Confidence 689999998888887543 3466679999999999999999999999999999888654
No 367
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=95.87 E-value=0.018 Score=51.38 Aligned_cols=85 Identities=15% Similarity=0.074 Sum_probs=63.6
Q ss_pred CChHHHHHHHHHHHhccCHHHHHHHHHHhhC--------hhhhhhHhhccCCHHHHHHHHHh-----cC--ChHHHHHHH
Q psy14927 48 KDPVLLKWWAQYIESTEDMDLAMKYYEEARD--------YLSMVRVLCFLQDFSRAAELANA-----SG--DTAAAYHLA 112 (1074)
Q Consensus 48 ~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d--------~~~~vr~l~~~~~~~~a~~i~~~-----~~--~~~~~~~la 112 (1074)
+++..+...|..+...|++++|..+|.++-. +..+..++..+|++++|.+..+. +. +....+.+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~ 83 (112)
T 2kck_A 4 QNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKA 83 (112)
T ss_dssp SSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHH
Confidence 3455666778888888888888888877532 23455567778888888776552 34 677888999
Q ss_pred HHHHhc-CChHHHHHHHHHhC
Q psy14927 113 RQYENS-GQFDEAIHFYSVAG 132 (1074)
Q Consensus 113 ~~~~~~-g~~~~Ai~~y~~a~ 132 (1074)
..+... |++++|+++|.++-
T Consensus 84 ~~~~~~~~~~~~A~~~~~~~~ 104 (112)
T 2kck_A 84 DALRYIEGKEVEAEIAEARAK 104 (112)
T ss_dssp HHHTTCSSCSHHHHHHHHHHG
T ss_pred HHHHHHhCCHHHHHHHHHHHh
Confidence 999999 99999999987753
No 368
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=95.87 E-value=0.0014 Score=77.61 Aligned_cols=90 Identities=17% Similarity=0.220 Sum_probs=64.7
Q ss_pred hhHHhhcCCcEEEEecCCccCCCC---CC-----------------------------HHHHHHHHHHHHhCCCEEEeCc
Q psy14927 922 GSVWGRLGAEVTAIEFMNAIGGMG---ID-----------------------------GEVAKQFQRILGKQGMQFKLGT 969 (1074)
Q Consensus 922 A~~l~~~G~~Vtlv~~~~~~~~~~---~~-----------------------------~~~~~~~~~~l~~~gV~i~~~~ 969 (1074)
|..|++.|.+|+|+++.+.+.... .. ..+...+.+.+++.||++++++
T Consensus 108 A~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~ 187 (497)
T 2bry_A 108 AVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGV 187 (497)
T ss_dssp HHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESC
T ss_pred HHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCC
Confidence 778888999999999887653100 01 4556677778888999999999
Q ss_pred eEEEEEec---CCeEEEEEeeccCCCCceEEEcCEEEEccCCcccC
Q psy14927 970 KVTGASKS---GDNITVTIENVKDPTKKEELSCDALLVCVGRRPYT 1012 (1074)
Q Consensus 970 ~v~~i~~~---~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 1012 (1074)
.|+++..+ ++++.|++.+.. +|+..++.+|.||+|+|..+..
T Consensus 188 ~v~~i~~~~~~~~~~~v~~~~~~-~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 188 KFTGLQPPPRKGSGWRAQLQPNP-PAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp EEEEEECCCSTTCCBEEEEESCC-CHHHHTCCBSEEEECCCTTCCC
T ss_pred EEEEEEEecCCCCEEEEEEEECC-CCCEEEEEcCEEEECCCCCccc
Confidence 99999863 345667664310 1222569999999999988755
No 369
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=95.87 E-value=0.032 Score=54.44 Aligned_cols=82 Identities=17% Similarity=0.140 Sum_probs=66.7
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhhCh--------------------------hhhhhHhhccCCHHHHHHHHH---
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEARDY--------------------------LSMVRVLCFLQDFSRAAELAN--- 100 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~--------------------------~~~vr~l~~~~~~~~a~~i~~--- 100 (1074)
...++..|..+...|+|++|+++|.++=+. .++..++..+|++++|...++
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 456777788899999999999999887554 334556778999999988765
Q ss_pred --hcCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 101 --ASGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 101 --~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
.+.+..+.+.+|..|...|++++|++.|.++
T Consensus 91 ~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a 123 (162)
T 3rkv_A 91 KREETNEKALFRRAKARIAAWKLDEAEEDLKLL 123 (162)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHH
Confidence 3577888999999999999999999988664
No 370
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=95.86 E-value=0.073 Score=47.35 Aligned_cols=75 Identities=23% Similarity=0.348 Sum_probs=59.6
Q ss_pred cCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHH
Q psy14927 46 QSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAI 125 (1074)
Q Consensus 46 ~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai 125 (1074)
.++++..|..+|..+...|++++|.++|.++=.. .+.+..+.+.+|..|...|++++|+
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---------------------~p~~~~a~~~lg~~~~~~g~~~~A~ 61 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVET---------------------DPDYVGTYYHLGKLYERLDRTDDAI 61 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------------STTCTHHHHHHHHHHHHTTCHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------------------CCCcHHHHHHHHHHHHHcCCHHHHH
Confidence 3567889999999999999999999999776332 3456778899999999999999999
Q ss_pred HHHHHhCChHHHHHHHHHhCch
Q psy14927 126 HFYSVAGSCGNAVRLCKEQALD 147 (1074)
Q Consensus 126 ~~y~~a~~~~~A~~la~~~~~~ 147 (1074)
++|.+ |++++...+..
T Consensus 62 ~~~~~------al~l~~~~~~~ 77 (100)
T 3ma5_A 62 DTYAQ------GIEVAREEGTQ 77 (100)
T ss_dssp HHHHH------HHHHHHHHSCH
T ss_pred HHHHH------HHhhhhcCCch
Confidence 98765 67776666433
No 371
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=95.85 E-value=0.049 Score=51.05 Aligned_cols=81 Identities=22% Similarity=0.111 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHh-----h---CHHHHHHHHHHcCCHHHHHHHHH----h-cCCcHHHHHHHHHHHh
Q psy14927 625 VLLKWWAQYIESTEDMDLAMKYYEEA-----R---DYLSMVRVLCFLQDFSRAAELAN----A-SGDTAAAYHLARQYEN 691 (1074)
Q Consensus 625 ~l~~~~a~~~e~~~~~~~A~~~y~~a-----g---~~~~ai~~~~~~~~~~~a~~v~~----~-~~~~~~~~~~A~~~~~ 691 (1074)
+.+...|...-..|+|++|+++|.+| . -+-..-.+|...++|++|++.++ . ......-..+|..+..
T Consensus 14 ~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~ 93 (126)
T 4gco_A 14 QEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVA 93 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Confidence 45566778888889999999999887 2 22344456888889988887663 2 2333444488999999
Q ss_pred cCCHHHHHHHHHHc
Q psy14927 692 SGQFDEAIHFYSVA 705 (1074)
Q Consensus 692 ~g~~~~A~~~~~ka 705 (1074)
.|++++|+++|.++
T Consensus 94 ~~~~~~A~~~~~~a 107 (126)
T 4gco_A 94 MREWSKAQRAYEDA 107 (126)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 99999988888665
No 372
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=95.83 E-value=0.034 Score=51.27 Aligned_cols=95 Identities=21% Similarity=0.234 Sum_probs=69.5
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh------
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY------ 79 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~------ 79 (1074)
+...|++++|+.+|+++-..+ +.++..+..+|..+...|++++|.++|.++-..
T Consensus 26 ~~~~~~~~~A~~~~~~al~~~--------------------~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 85 (133)
T 2lni_A 26 CFQKGDYPQAMKHYTEAIKRN--------------------PKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIK 85 (133)
T ss_dssp HHHTTCSHHHHHHHHHHHTTC--------------------TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHcCCHHHHHHHHHHHHHcC--------------------CCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchH
Confidence 456788888888888775433 234678888899999999999999999875432
Q ss_pred --hhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCC
Q psy14927 80 --LSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQ 120 (1074)
Q Consensus 80 --~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~ 120 (1074)
..+..++..+|++++|.+..++ +.+..+...++..+..+|+
T Consensus 86 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 86 GYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 3345668888999988887652 3456677788888877664
No 373
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=95.80 E-value=0.013 Score=64.85 Aligned_cols=31 Identities=16% Similarity=0.165 Sum_probs=26.4
Q ss_pred hhhhhccccchHHHHHHHhh-------hhhhhcccccc
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-------KLFTQAGDKGV 826 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-------~l~e~~~~~g~ 826 (1074)
+|+||||||+|+.+|+.|++ +++|+.+..|+
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~gg 104 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccc
Confidence 59999999999999999986 57888776654
No 374
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.80 E-value=0.049 Score=51.38 Aligned_cols=85 Identities=20% Similarity=0.209 Sum_probs=68.5
Q ss_pred CCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh-----------hhhhhHhhccCCHHHHHHHHH-----hcCChHHHHH
Q psy14927 47 SKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY-----------LSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYH 110 (1074)
Q Consensus 47 ~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~-----------~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~ 110 (1074)
..+...+...|..+...|++++|.++|.++-.. ..+..++..+|++++|.+..+ .+.+..+.+.
T Consensus 25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 104 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYR 104 (148)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHH
Confidence 345678888899999999999999999986443 234555788999999988765 3457778889
Q ss_pred HHHHHHhcCChHHHHHHHHHh
Q psy14927 111 LARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 111 la~~~~~~g~~~~Ai~~y~~a 131 (1074)
+|..|...|++++|+++|.++
T Consensus 105 ~a~~~~~~~~~~~A~~~~~~a 125 (148)
T 2dba_A 105 RSQALEKLGRLDQAVLDLQRC 125 (148)
T ss_dssp HHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHH
Confidence 999999999999999987654
No 375
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.75 E-value=0.051 Score=51.91 Aligned_cols=68 Identities=21% Similarity=0.299 Sum_probs=47.4
Q ss_pred cCHHHHHHHHHHhh---Chhh-hhhHhhccCCHHHHHHHHH---hcCChHHHHHHHHHHHh----cCChHHHHHHHHHh
Q psy14927 64 EDMDLAMKYYEEAR---DYLS-MVRVLCFLQDFSRAAELAN---ASGDTAAAYHLARQYEN----SGQFDEAIHFYSVA 131 (1074)
Q Consensus 64 ~~~~~A~~~y~~a~---d~~~-~vr~l~~~~~~~~a~~i~~---~~~~~~~~~~la~~~~~----~g~~~~Ai~~y~~a 131 (1074)
+++++|.++|.++- +..+ +..+|...+.+++|.+..+ +.++..+++.+|..|.. .+|+++|+++|.++
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~a~lg~~y~~g~~~~~A~~~~~~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~A 87 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMFGCLSLVSNSQINKQKLFQYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKA 87 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHHHHHHTCTTSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCHhhhHHHHHHcCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHH
Confidence 45666666666642 2222 2333555566666666655 45788999999999998 89999999999877
No 376
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=95.75 E-value=0.0072 Score=67.45 Aligned_cols=86 Identities=15% Similarity=0.176 Sum_probs=57.5
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHH-HHhhhCCeEEEee-eEEEe
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIA-HLFKSNKVTQLNG-HGKIT 867 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~l~~~gV~~~~g-~v~~i 867 (1074)
++|+|||||+.|+..|..+++ ++++..+... . ...+. ..+++.||+++.+ .++.+
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~---------~---------~~~~~~~~~~~~gV~v~~~~~v~~i 217 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR---------A---------SKIMLDRARNNDKIRFLTNHTVVAV 217 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS---------S---------CTTHHHHHHHCTTEEEECSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC---------c---------cHHHHHHHhccCCcEEEeCceeEEE
Confidence 349999999999999999987 4444333221 0 01122 3345689999998 57777
Q ss_pred cCCe----EEEEe-CCCCeeEEEcCeEEEccCCCCC
Q psy14927 868 GPNT----VTVIK-SDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 868 d~~~----~~v~~-~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
+.+. +.+.. .+|+..++.+|.||+|||.+|.
T Consensus 218 ~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 253 (335)
T 2a87_A 218 DGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPR 253 (335)
T ss_dssp ECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEEC
T ss_pred ecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccC
Confidence 6543 33332 2454468999999999999874
No 377
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=95.72 E-value=0.0084 Score=68.98 Aligned_cols=51 Identities=14% Similarity=0.091 Sum_probs=33.1
Q ss_pred hhhhHHHHhhhCCeEEEee-eEE---------EecC--CeEEEEeCCCCeeEEEcCeEEEccCCCC
Q psy14927 844 LTGGIAHLFKSNKVTQLNG-HGK---------ITGP--NTVTVIKSDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 844 l~~~~~~~l~~~gV~~~~g-~v~---------~id~--~~~~v~~~~G~~~~i~~d~lIIATG~~p 897 (1074)
+...+.+.+.+.|++++.+ +|+ .+.. +.+.|.+.+| ++.+|.||+|||...
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g---~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR---QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE---EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc---EEECCEEEECCCccH
Confidence 3344566667789999988 466 5543 2334444444 799999999999863
No 378
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=95.71 E-value=0.0047 Score=72.28 Aligned_cols=40 Identities=30% Similarity=0.410 Sum_probs=32.7
Q ss_pred CEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCC
Q psy14927 963 MQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGR 1008 (1074)
Q Consensus 963 V~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~ 1008 (1074)
++|++++.|++|+.+++++.|++.+ ++++.+|.||+|++.
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~------g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDN------GVTLDADSVIVTAPH 287 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESS------SCEEEESEEEECSCH
T ss_pred CEEEeCCceEEEEEcCCeEEEEECC------CCEEECCEEEECCCH
Confidence 6999999999999877777776544 457999999999864
No 379
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.71 E-value=0.034 Score=53.18 Aligned_cols=99 Identities=15% Similarity=0.085 Sum_probs=66.3
Q ss_pred CCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHh---hChhhhhhH-
Q psy14927 10 GDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEA---RDYLSMVRV- 85 (1074)
Q Consensus 10 g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a---~d~~~~vr~- 85 (1074)
+++++|+++|+++-... +.... +|..++..+..+.|.++|.+| |+......+
T Consensus 9 ~d~~~A~~~~~~aa~~g---------------------~~~a~---lg~~y~~g~~~~~A~~~~~~Aa~~g~~~a~~~Lg 64 (138)
T 1klx_A 9 KDLKKAIQYYVKACELN---------------------EMFGC---LSLVSNSQINKQKLFQYLSKACELNSGNGCRFLG 64 (138)
T ss_dssp HHHHHHHHHHHHHHHTT---------------------CTTHH---HHHHTCTTSCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcCC---------------------CHhhh---HHHHHHcCCCHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 46788888888875332 11112 555555555666666666664 333333333
Q ss_pred --hhc----cCCHHHHHHHHH---hcCChHHHHHHHHHHHh----cCChHHHHHHHHHhC
Q psy14927 86 --LCF----LQDFSRAAELAN---ASGDTAAAYHLARQYEN----SGQFDEAIHFYSVAG 132 (1074)
Q Consensus 86 --l~~----~~~~~~a~~i~~---~~~~~~~~~~la~~~~~----~g~~~~Ai~~y~~a~ 132 (1074)
|.. ..|+++|.+..+ +.++..+++.||..|.. .+|+++|+++|.++-
T Consensus 65 ~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa 124 (138)
T 1klx_A 65 DFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKAC 124 (138)
T ss_dssp HHHHHCSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred HHHHcCCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHH
Confidence 444 567777777655 45788999999999999 899999999998863
No 380
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=95.64 E-value=0.057 Score=58.28 Aligned_cols=118 Identities=16% Similarity=0.086 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHh--hCHHHHH-----HHHHHcCCHHHHHHHHHhcCC-------cHHHHHHHHHHH
Q psy14927 625 VLLKWWAQYIESTEDMDLAMKYYEEA--RDYLSMV-----RVLCFLQDFSRAAELANASGD-------TAAAYHLARQYE 690 (1074)
Q Consensus 625 ~l~~~~a~~~e~~~~~~~A~~~y~~a--g~~~~ai-----~~~~~~~~~~~a~~v~~~~~~-------~~~~~~~A~~~~ 690 (1074)
++...+|..+...|+|++|.+.|... +.+...+ .++...++|++|+...+.... .+....++..++
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~ 182 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAA 182 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHH
Confidence 68889999999999999999999766 3333321 247899999999999953321 224458899999
Q ss_pred hcCCHHHHHHHHHHcCCHHHHHHHhccHHHHHHHHHHhCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHh
Q psy14927 691 NSGQFDEAIHFYSVAGSCGNAVRLCGQLDAVESIASELNVQSDQDLILKCASYFARREHHDRAVQMYAIA 760 (1074)
Q Consensus 691 ~~g~~~~A~~~~~kag~~~~Av~ma~~w~~a~~~A~~~~~~~~~~~~~~~a~~~~~~~~~~~Ai~~y~~a 760 (1074)
..|++++|+.+|-++.. ..+.|....+....+|.-|...|+.++|..+|.+.
T Consensus 183 ~LG~~~eAl~~l~~a~~------------------g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a 234 (282)
T 4f3v_A 183 NLALFTEAERRLTEAND------------------SPAGEACARAIAWYLAMARRSQGNESAAVALLEWL 234 (282)
T ss_dssp HTTCHHHHHHHHHHHHT------------------STTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHhc------------------CCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 99999999999987621 01113334567778888888889999888888655
No 381
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=95.63 E-value=0.049 Score=60.66 Aligned_cols=81 Identities=19% Similarity=0.249 Sum_probs=61.2
Q ss_pred hhHHhhcCCcEEEEecCCccCC--------------------CCCC-----------HHHHHHHHHHHHhCCCEEEeCce
Q psy14927 922 GSVWGRLGAEVTAIEFMNAIGG--------------------MGID-----------GEVAKQFQRILGKQGMQFKLGTK 970 (1074)
Q Consensus 922 A~~l~~~G~~Vtlv~~~~~~~~--------------------~~~~-----------~~~~~~~~~~l~~~gV~i~~~~~ 970 (1074)
|..|++.|.+|+|+++.+.+.. +.++ ..+...+.+.+++.|++++.++.
T Consensus 19 A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 98 (357)
T 4a9w_A 19 GYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLAQYEQKYALPVLRPIR 98 (357)
T ss_dssp HHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHHHHHHHTTCCEECSCC
T ss_pred HHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHHHHHHHcCCEEEcCCE
Confidence 5667788999999998765310 1110 57778888888999999999999
Q ss_pred EEEEEecCCeEE-EEEeeccCCCCceEEEcCEEEEccCCc
Q psy14927 971 VTGASKSGDNIT-VTIENVKDPTKKEELSCDALLVCVGRR 1009 (1074)
Q Consensus 971 v~~i~~~~~~~~-v~~~~~~~~g~~~~i~~D~vi~a~G~~ 1009 (1074)
|+.+..+++... |++.+ + ++.+|.||+|+|..
T Consensus 99 v~~i~~~~~~~~~v~~~~------g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 99 VQRVSHFGERLRVVARDG------R-QWLARAVISATGTW 131 (357)
T ss_dssp EEEEEEETTEEEEEETTS------C-EEEEEEEEECCCSG
T ss_pred EEEEEECCCcEEEEEeCC------C-EEEeCEEEECCCCC
Confidence 999998777655 54322 3 79999999999963
No 382
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=95.62 E-value=0.054 Score=48.99 Aligned_cols=82 Identities=24% Similarity=0.387 Sum_probs=63.0
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhhC--------hhhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHH
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEARD--------YLSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYE 116 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~d--------~~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~ 116 (1074)
...+..+|..+...|++++|.++|.++-. +..+..++...|++++|....+. +.+......+|..|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 55677778888888999999888887632 23455667788888888877652 456677889999999
Q ss_pred hcCChHHHHHHHHHh
Q psy14927 117 NSGQFDEAIHFYSVA 131 (1074)
Q Consensus 117 ~~g~~~~Ai~~y~~a 131 (1074)
..|++++|+++|.++
T Consensus 89 ~~~~~~~A~~~~~~~ 103 (125)
T 1na0_A 89 KQGDYDEAIEYYQKA 103 (125)
T ss_dssp HTTCHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHH
Confidence 999999999887654
No 383
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=95.60 E-value=0.035 Score=65.33 Aligned_cols=114 Identities=15% Similarity=0.049 Sum_probs=68.1
Q ss_pred HHhhhcHHHHHHHHHHh----------------hCHHHHHHHHHHcCCHHHHHHHHH----------hcCCcHH--HH-H
Q psy14927 634 IESTEDMDLAMKYYEEA----------------RDYLSMVRVLCFLQDFSRAAELAN----------ASGDTAA--AY-H 684 (1074)
Q Consensus 634 ~e~~~~~~~A~~~y~~a----------------g~~~~ai~~~~~~~~~~~a~~v~~----------~~~~~~~--~~-~ 684 (1074)
+..+|+|++|+.+|.++ .-..+....|..+++|++|..+.+ ..+.++. ++ .
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~n 398 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMR 398 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 44556666666666555 223344445566666666654442 1222333 33 8
Q ss_pred HHHHHHhcCCHHHHHHHHHHcCCHHHHHHHhccHHHHHHHHHHhCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHh
Q psy14927 685 LARQYENSGQFDEAIHFYSVAGSCGNAVRLCGQLDAVESIASELNVQSDQDLILKCASYFARREHHDRAVQMYAIA 760 (1074)
Q Consensus 685 ~A~~~~~~g~~~~A~~~~~kag~~~~Av~ma~~w~~a~~~A~~~~~~~~~~~~~~~a~~~~~~~~~~~Ai~~y~~a 760 (1074)
+|..+...|+|++|+.+|.+|-.+.+.+ +...| +.+.+++..+++.....+++.+|..+|.++
T Consensus 399 La~~~~~~G~~~eA~~~~~~Al~i~~~~-----------lG~~H--p~~~~~~~~l~~~~~e~~~~~~ae~~~~~~ 461 (490)
T 3n71_A 399 AGLTNWHAGHIEVGHGMICKAYAILLVT-----------HGPSH--PITKDLEAMRMQTEMELRMFRQNEFMYHKM 461 (490)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHH-----------TCTTS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHH-----------hCCCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999998774442221 12222 233355556666666677778888888776
No 384
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=95.59 E-value=0.0063 Score=71.69 Aligned_cols=107 Identities=16% Similarity=0.080 Sum_probs=71.5
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh------
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY------ 79 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~------ 79 (1074)
+.++|++++|+++|+++-..+ ++++..+..+|..+...|++++|+++|.++=..
T Consensus 16 ~~~~g~~~~A~~~~~~Al~~~--------------------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 75 (477)
T 1wao_1 16 YFKAKDYENAIKFYSQAIELN--------------------PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIK 75 (477)
T ss_dssp TTTTTCHHHHHHHHHHHHHHC--------------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHhCCHHHHHHHHHHHHHhC--------------------CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHH
Confidence 457899999999999886332 445788889999999999999999999886332
Q ss_pred --hhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHH--HHhcCChHHHHHHHHHhC
Q psy14927 80 --LSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQ--YENSGQFDEAIHFYSVAG 132 (1074)
Q Consensus 80 --~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~--~~~~g~~~~Ai~~y~~a~ 132 (1074)
..+..+|..+|++++|.+..++ +.+..+...++.. +.++|++++|+++|.+..
T Consensus 76 ~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~ 137 (477)
T 1wao_1 76 GYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKR 137 (477)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------CC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 3445556777777777666552 3444555555555 666677777777666443
No 385
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=95.58 E-value=0.046 Score=55.34 Aligned_cols=82 Identities=21% Similarity=0.193 Sum_probs=66.9
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhhC------------------------hhhhhhHhhccCCHHHHHHHHH-----
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEARD------------------------YLSMVRVLCFLQDFSRAAELAN----- 100 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~d------------------------~~~~vr~l~~~~~~~~a~~i~~----- 100 (1074)
...+...|..+...|+|++|.++|.++-. +..+..++..+|++++|.+..+
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI 117 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 44667779999999999999999998753 2345566888999999988776
Q ss_pred hcCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 101 ASGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 101 ~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
.+.+..+.+.+|..|...|++++|+++|.++
T Consensus 118 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~a 148 (198)
T 2fbn_A 118 DKNNVKALYKLGVANMYFGFLEEAKENLYKA 148 (198)
T ss_dssp STTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 3567788899999999999999999988654
No 386
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=95.57 E-value=0.0036 Score=77.89 Aligned_cols=42 Identities=29% Similarity=0.412 Sum_probs=34.3
Q ss_pred CCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCC
Q psy14927 961 QGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGR 1008 (1074)
Q Consensus 961 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~ 1008 (1074)
.|++|++++.|++|..+++++.|++.+ +.++.+|.||+|++.
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~~------G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTTD------GTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEETT------CCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEECC------CcEEEcCEEEECCCH
Confidence 479999999999999877777776544 357999999999853
No 387
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=95.51 E-value=0.012 Score=70.37 Aligned_cols=43 Identities=12% Similarity=0.173 Sum_probs=33.7
Q ss_pred HhhhCCeEEE---eeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 851 LFKSNKVTQL---NGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 851 ~l~~~gV~~~---~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
.+.+.+|+++ ...+..+++..+ .+++| ++.+|.||+|||..+.
T Consensus 352 al~~~~V~lvd~~~~~I~~it~~gv--~~~dG---~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 352 TYNRDNVELVDLRSTPIVGMDETGI--VTTGA---HYDLDMIVLATGFDAM 397 (549)
T ss_dssp GGGSTTEEEEETTTSCEEEEETTEE--EESSC---EEECSEEEECCCEEES
T ss_pred HhcCCCEEEEeCCCCCceEEeCCcE--EeCCC---ceecCEEEECCccccc
Confidence 3455689998 777888888754 45777 6899999999998764
No 388
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=95.49 E-value=0.012 Score=69.73 Aligned_cols=101 Identities=10% Similarity=0.002 Sum_probs=0.0
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhh------------------------------------
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMM------------------------------------ 834 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~------------------------------------ 834 (1074)
+|+|||||++|+++|+.|++ +++|+.+..++......-.
T Consensus 5 DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~gtS~~s~gli~~g~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 84 (501)
T 2qcu_A 5 DLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFP 84 (501)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCCEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCTTTEEE
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCCccccccccccccchhhhhchHHHHHHHHHHHHHHHHhCCccccc
Q ss_pred --------------------------------------------hhhhH-------------HHhhhhhhHHHHhhhCCe
Q psy14927 835 --------------------------------------------GTKSA-------------AVKALTGGIAHLFKSNKV 857 (1074)
Q Consensus 835 --------------------------------------------~~~~~-------------~~~~l~~~~~~~l~~~gV 857 (1074)
+.... ....+...+...+.+.|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~P~l~~~~~~~~~~~~g~v~~~~l~~~l~~~a~~~Gv 164 (501)
T 2qcu_A 85 MRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGG 164 (501)
T ss_dssp EEEEEECCTTTSCHHHHHHHHHHHHSSSCCSSSCCCEEEECCTTSSBCTTCCEEEEEEEEEECHHHHHHHHHHHHHHTTC
T ss_pred cCeEeccCcccchHHHHHHHHHHHHhcCCcEEECHHHHHHhhcCCCcchhceEEEEeeCCEEcHHHHHHHHHHHHHHcCC
Q ss_pred EEEee-eEEEe--cCCeEEEEe---CCCCeeEEEcCeEEEccCCC
Q psy14927 858 TQLNG-HGKIT--GPNTVTVIK---SDGSTEEVKTKNILIATGSE 896 (1074)
Q Consensus 858 ~~~~g-~v~~i--d~~~~~v~~---~~G~~~~i~~d~lIIATG~~ 896 (1074)
+++.+ +|+.+ +.....|++ .+|+..++.+|.||+|||..
T Consensus 165 ~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~ 209 (501)
T 2qcu_A 165 EVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPW 209 (501)
T ss_dssp EEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGG
T ss_pred EEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChh
No 389
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.42 E-value=0.016 Score=68.97 Aligned_cols=86 Identities=17% Similarity=0.146 Sum_probs=57.7
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhh-CCeEEEee-eEEEe
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKS-NKVTQLNG-HGKIT 867 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~-~gV~~~~g-~v~~i 867 (1074)
++|+|||||+.|+.+|..|++ ++++..+.... . ..+.+.+.+ .||+++.+ .++.+
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---------~---------~~l~~~l~~~~gV~v~~~~~v~~i 417 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---------D---------QVLQDKVRSLKNVDIILNAQTTEV 417 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---------C---------HHHHHHHTTCTTEEEECSEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---------C---------HHHHHHHhcCCCcEEEeCCEEEEE
Confidence 459999999999999999988 44444332210 0 113344555 59999999 56666
Q ss_pred cCC--eE-EEEeC---CCCeeEEEcCeEEEccCCCCC
Q psy14927 868 GPN--TV-TVIKS---DGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 868 d~~--~~-~v~~~---~G~~~~i~~d~lIIATG~~p~ 898 (1074)
..+ .+ .+.+. +|+..++.+|.||+|+|..|.
T Consensus 418 ~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn 454 (521)
T 1hyu_A 418 KGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPN 454 (521)
T ss_dssp EECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEES
T ss_pred EcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCC
Confidence 542 22 34433 465567999999999999874
No 390
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=95.39 E-value=0.0098 Score=58.30 Aligned_cols=87 Identities=18% Similarity=0.207 Sum_probs=62.4
Q ss_pred HHhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHH----------HHHHHH
Q psy14927 4 EETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMD----------LAMKYY 73 (1074)
Q Consensus 4 ~~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~----------~A~~~y 73 (1074)
.++++.++|++|++.|+++-..+ ++++..|..||..+.+.++++ +|+.+|
T Consensus 10 ~~~~r~~~feeA~~~~~~Ai~l~--------------------P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~l 69 (158)
T 1zu2_A 10 TEFDRILLFEQIRQDAENTYKSN--------------------PLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKF 69 (158)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHC--------------------TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred cHHHHHhHHHHHHHHHHHHHHHC--------------------CCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHH
Confidence 46778888999999888876333 567889999999998888765 444444
Q ss_pred HHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcC-----------ChHHHHHHHHHh
Q psy14927 74 EEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSG-----------QFDEAIHFYSVA 131 (1074)
Q Consensus 74 ~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g-----------~~~~Ai~~y~~a 131 (1074)
.+|=.. +++...+.+.+|..|.++| ++++|+++|.+|
T Consensus 70 e~AL~l---------------------dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kA 117 (158)
T 1zu2_A 70 EEALLI---------------------DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQA 117 (158)
T ss_dssp HHHHHH---------------------CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh---------------------CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHH
Confidence 333222 4567778888998888775 788888866543
No 391
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=95.39 E-value=0.057 Score=62.42 Aligned_cols=100 Identities=11% Similarity=0.007 Sum_probs=67.5
Q ss_pred hcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChH---HHHHHHHHHHhccCHHHHHHHHHHhhChhhhhh
Q psy14927 8 KNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPV---LLKWWAQYIESTEDMDLAMKYYEEARDYLSMVR 84 (1074)
Q Consensus 8 ~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr 84 (1074)
+.|+++||..+|+++.....++ + ..++|. .+..+|..+..+|+|++|+.+|.++=+. .+
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~----l-----------g~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i---~~ 371 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSV----F-----------EDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKP---YS 371 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTT----B-----------CTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---HH
T ss_pred hccCHHHHHHHHHHHHHHhhCc----c-----------ChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH---HH
Confidence 4688999999999887333221 1 122333 4556799999999999999999887333 11
Q ss_pred HhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHHhCChH
Q psy14927 85 VLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSCG 135 (1074)
Q Consensus 85 ~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~ 135 (1074)
-..--+.|+-| ...+.||..|..+|++++|+.+|.+|-..-
T Consensus 372 ~~lG~~Hp~~a----------~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 372 KHYPVYSLNVA----------SMWLKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHSCSSCHHHH----------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCCChHHH----------HHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 11122234222 235589999999999999999998765443
No 392
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=95.37 E-value=0.043 Score=50.23 Aligned_cols=81 Identities=22% Similarity=0.362 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHhhCh--------hhhhhHhhccCCHHHHHHHHHh-----cCC-------hHHHHH
Q psy14927 51 VLLKWWAQYIESTEDMDLAMKYYEEARDY--------LSMVRVLCFLQDFSRAAELANA-----SGD-------TAAAYH 110 (1074)
Q Consensus 51 ~l~~~~a~~~e~~~~~~~A~~~y~~a~d~--------~~~vr~l~~~~~~~~a~~i~~~-----~~~-------~~~~~~ 110 (1074)
..+...|..+...|++++|..+|.++-.. ..+..++...|++++|....+. +.+ ....+.
T Consensus 5 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (131)
T 1elr_A 5 LKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYAR 84 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHH
Confidence 34555566666666666666666654221 2334445556666666555442 112 556789
Q ss_pred HHHHHHhcCChHHHHHHHHHh
Q psy14927 111 LARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 111 la~~~~~~g~~~~Ai~~y~~a 131 (1074)
+|..+...|++++|+++|.++
T Consensus 85 la~~~~~~~~~~~A~~~~~~~ 105 (131)
T 1elr_A 85 IGNSYFKEEKYKDAIHFYNKS 105 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHH
Confidence 999999999999999987654
No 393
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.36 E-value=0.0076 Score=74.25 Aligned_cols=51 Identities=20% Similarity=0.268 Sum_probs=40.3
Q ss_pred hHHHHhhhCCeEEEee-eEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 847 GIAHLFKSNKVTQLNG-HGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 847 ~~~~~l~~~gV~~~~g-~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
.+...+++.||+++.+ .++.++.+.+.+. .+|+..++.+|.||+|||.+|.
T Consensus 578 ~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~-~~G~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 578 IHRTTLLSRGVKMIPGVSYQKIDDDGLHVV-INGETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp HHHHHHHHTTCEEECSCEEEEEETTEEEEE-ETTEEEEECCSEEEECCCEEEC
T ss_pred HHHHHHHhcCCEEEeCcEEEEEeCCeEEEe-cCCeEEEEeCCEEEECCCcccc
Confidence 3466778899999999 5778887766554 5665568999999999999974
No 394
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=95.34 E-value=0.099 Score=50.85 Aligned_cols=83 Identities=11% Similarity=0.099 Sum_probs=65.1
Q ss_pred hHHHHHHHHHHHHhhhcHHHHHHHHHHh--------hCHHHHHHHHHHcCCHHHHHHHHH-----hcCCcHHHHHHHHHH
Q psy14927 623 YRVLLKWWAQYIESTEDMDLAMKYYEEA--------RDYLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQY 689 (1074)
Q Consensus 623 ~~~l~~~~a~~~e~~~~~~~A~~~y~~a--------g~~~~ai~~~~~~~~~~~a~~v~~-----~~~~~~~~~~~A~~~ 689 (1074)
+++.+...|..+-..|+|++|+.+|.++ .-|-..-.+|...+++++|++..+ ..+.......+|..+
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~ 114 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQ 114 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHH
Confidence 3467788888899999999999999987 223344466889999999987663 345566666999999
Q ss_pred HhcCCHHHHHHHHHHc
Q psy14927 690 ENSGQFDEAIHFYSVA 705 (1074)
Q Consensus 690 ~~~g~~~~A~~~~~ka 705 (1074)
...|++++|+.+|-++
T Consensus 115 ~~lg~~~eA~~~~~~a 130 (151)
T 3gyz_A 115 LRLKAPLKAKECFELV 130 (151)
T ss_dssp HHTTCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHH
Confidence 9999999999998765
No 395
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=95.32 E-value=0.049 Score=60.72 Aligned_cols=115 Identities=14% Similarity=0.026 Sum_probs=75.0
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh------
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY------ 79 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~------ 79 (1074)
+...|++++|+..|+++-.....-+..-......+..+ ...++..+|..+...|++++|+++|.++=..
T Consensus 157 ~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~-----~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~ 231 (336)
T 1p5q_A 157 YFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQAL-----RLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEK 231 (336)
T ss_dssp HHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHH-----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHH-----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Confidence 45678888888888887644322111000001111111 1468888899999999999999999986432
Q ss_pred --hhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcCChHHHH
Q psy14927 80 --LSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSGQFDEAI 125 (1074)
Q Consensus 80 --~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g~~~~Ai 125 (1074)
..+..+|..+|++++|.+..+ .+.+..+.+.++..+...|++++|.
T Consensus 232 a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~ 284 (336)
T 1p5q_A 232 GLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLARE 284 (336)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 345555777888888776654 3456677777888888888777773
No 396
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=95.30 E-value=1.1 Score=54.67 Aligned_cols=94 Identities=11% Similarity=0.079 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhcCCChhhHHHhhhhcc---------------------------hHHHHHHHHHHHhcCCCCCChhHHHH
Q psy14927 205 VFQIKAMKCLLKSGDTNKIIFFAGVSR---------------------------MKEIYVMAANYLQSSDWKSQPELLKS 257 (1074)
Q Consensus 205 ~~~~~a~k~l~~~~~~~~~i~~a~~~r---------------------------~~~l~~~aa~yl~~~~~~~~~~~~~~ 257 (1074)
..|+...+...+.|+.+++-.+-..+. ...+|+..+++.... ..+..
T Consensus 379 ~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~------~~l~~ 452 (679)
T 4e6h_A 379 VLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRI------QGLAA 452 (679)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHH------HCHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHc------CCHHH
Confidence 456666677777777766543333322 234677778777654 22334
Q ss_pred HHHHHHccCCH-H-HHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHH
Q psy14927 258 IISFYSKGKAP-H-LLANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLL 304 (1074)
Q Consensus 258 i~~~Y~k~~~~-~-~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~ 304 (1074)
+-..|.++.+. . .....|...|..|..-.++++.|..++..+++.+.
T Consensus 453 AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p 501 (679)
T 4e6h_A 453 SRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFA 501 (679)
T ss_dssp HHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCC
Confidence 44444444322 1 12355667777773333458888888888877644
No 397
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=95.27 E-value=0.26 Score=53.24 Aligned_cols=65 Identities=11% Similarity=0.040 Sum_probs=44.5
Q ss_pred CChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHH
Q psy14927 48 KDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHF 127 (1074)
Q Consensus 48 ~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~ 127 (1074)
+++..+...|..+...|++++|+..|.++=. ..+++..+.+.+|+.+..+|++++|++.
T Consensus 115 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~---------------------~~P~~~~a~~~la~~~~~~g~~~~A~~~ 173 (287)
T 3qou_A 115 REEELXAQQAMQLMQESNYTDALPLLXDAWQ---------------------LSNQNGEIGLLLAETLIALNRSEDAEAV 173 (287)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---------------------HTTSCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CchhhHHHHHHHHHhCCCHHHHHHHHHHHHH---------------------hCCcchhHHHHHHHHHHHCCCHHHHHHH
Confidence 4455666667777777777777766655421 2456677777888888888888888888
Q ss_pred HHHhCC
Q psy14927 128 YSVAGS 133 (1074)
Q Consensus 128 y~~a~~ 133 (1074)
|.++-.
T Consensus 174 l~~~~~ 179 (287)
T 3qou_A 174 LXTIPL 179 (287)
T ss_dssp HTTSCG
T ss_pred HHhCch
Confidence 777643
No 398
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=95.22 E-value=0.25 Score=60.77 Aligned_cols=70 Identities=19% Similarity=0.118 Sum_probs=53.2
Q ss_pred HhccCHHHHHHHHHHhh--------C--------hhhhhhHhhccCCHHHHHHHHH-----hcCChHHHHHHHHHHHhcC
Q psy14927 61 ESTEDMDLAMKYYEEAR--------D--------YLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYENSG 119 (1074)
Q Consensus 61 e~~~~~~~A~~~y~~a~--------d--------~~~~vr~l~~~~~~~~a~~i~~-----~~~~~~~~~~la~~~~~~g 119 (1074)
...|++++|+++|.++- . +....++|..+|++++|.+..+ .+.+..+.+.+|..|...|
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g 481 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTG 481 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHT
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcC
Confidence 78999999999999875 1 2344556778888888877655 3567778888888888888
Q ss_pred ChHHHHHHHHH
Q psy14927 120 QFDEAIHFYSV 130 (1074)
Q Consensus 120 ~~~~Ai~~y~~ 130 (1074)
++++|++.|.+
T Consensus 482 ~~~~A~~~~~~ 492 (681)
T 2pzi_A 482 DYDSATKHFTE 492 (681)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 88888887654
No 399
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=95.20 E-value=0.087 Score=60.87 Aligned_cols=107 Identities=11% Similarity=0.014 Sum_probs=70.9
Q ss_pred HHhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhh
Q psy14927 4 EETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMV 83 (1074)
Q Consensus 4 ~~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~v 83 (1074)
+++.++|++++|..+|+++-....++.-- .++.. -.++..+|..+..+|+|++|+.+|.++=....
T Consensus 295 e~~~~~g~~~~a~~~~~~~L~~~~~~lg~--~h~~~----------~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~-- 360 (429)
T 3qwp_A 295 EELKAHWKWEQVLAMCQAIISSNSERLPD--INIYQ----------LKVLDCAMDACINLGLLEEALFYGTRTMEPYR-- 360 (429)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTCSSCCCCT--TSHHH----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH--
T ss_pred HHHHhhccHHHHHHHHHHHHHhccCcCCc--cchHH----------HHHHHHHHHHHHhhccHHHHHHHHHHHHHhHH--
Confidence 56778899999999999886443222000 01111 33566678888999999999999987643311
Q ss_pred hHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHHhCChH
Q psy14927 84 RVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVAGSCG 135 (1074)
Q Consensus 84 r~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~ 135 (1074)
-..--+.|+-| ...+.||..|..+|++++|+.+|.+|-..-
T Consensus 361 -~~lg~~Hp~~a----------~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 361 -IFFPGSHPVRG----------VQVMKVGKLQLHQGMFPQAMKNLRLAFDIM 401 (429)
T ss_dssp -HHSCSSCHHHH----------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred -HHcCCCChHHH----------HHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 11122233211 235689999999999999999988765433
No 400
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.18 E-value=0.019 Score=68.65 Aligned_cols=45 Identities=16% Similarity=0.228 Sum_probs=34.6
Q ss_pred HHHHhhhCCeEEE---eeeEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCC
Q psy14927 848 IAHLFKSNKVTQL---NGHGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 848 ~~~~l~~~gV~~~---~g~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p 897 (1074)
+.+.+.+.||+++ .+.+..+++..+ .+.+| ++++|.||.|||..+
T Consensus 344 y~~al~~~nV~lv~~~~~~I~~it~~gv--~~~dG---~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 344 YYETYNRDNVHLVDIREAPIQEVTPEGI--KTADA---AYDLDVIIYATGFDA 391 (545)
T ss_dssp HHHHTTSTTEEEEETTTSCEEEEETTEE--EESSC---EEECSEEEECCCCBS
T ss_pred HHHHhcCCCEEEEecCCCCceEEccCeE--EeCCC---eeecCEEEECCcccc
Confidence 3445556699999 467888887764 45777 689999999999985
No 401
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=95.14 E-value=0.031 Score=61.88 Aligned_cols=88 Identities=19% Similarity=0.170 Sum_probs=65.5
Q ss_pred hhHHhhcCCcEEEEecCC----ccC-----------CCCC-----CHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeE
Q psy14927 922 GSVWGRLGAEVTAIEFMN----AIG-----------GMGI-----DGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNI 981 (1074)
Q Consensus 922 A~~l~~~G~~Vtlv~~~~----~~~-----------~~~~-----~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~ 981 (1074)
|..|++.|.+|+|+++.+ .+. .+.+ .+++...+.+.+++.||+++.++ +..+..+++.+
T Consensus 38 A~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~ 116 (338)
T 3itj_A 38 AIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPF 116 (338)
T ss_dssp HHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSE
T ss_pred HHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEE
Confidence 667788899999999843 111 0122 24777888888999999999998 99998876666
Q ss_pred EEEEeeccCCCCceEEEcCEEEEccCCcccCC
Q psy14927 982 TVTIENVKDPTKKEELSCDALLVCVGRRPYTH 1013 (1074)
Q Consensus 982 ~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 1013 (1074)
.+.+.. ++.+.++.+|.||+|+|..|...
T Consensus 117 ~v~~~~---~~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 117 KLWTEF---NEDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp EEEETT---CSSSCCEEEEEEEECCCEEECCC
T ss_pred EEEEEe---cCCCcEEEeCEEEECcCCCcCCC
Confidence 666542 23356799999999999988654
No 402
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=95.14 E-value=0.0023 Score=73.10 Aligned_cols=91 Identities=11% Similarity=0.043 Sum_probs=55.9
Q ss_pred hhhhhccccchHHHHHHHhh-------hhhhhcccc---ccccch---------------hh-hhh--------------
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-------KLFTQAGDK---GVKLNL---------------ET-MMG-------------- 835 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-------~l~e~~~~~---g~~~~~---------------~~-~~~-------------- 835 (1074)
+|+||||||+|+++|+.|++ +++|+.+.. |..+.+ .. +..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 81 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHHN 81 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeCC
Confidence 48999999999999999987 577776543 211100 00 000
Q ss_pred ----------hhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCC
Q psy14927 836 ----------TKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 836 ----------~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p 897 (1074)
+..-....+...+.+.+...||+++++ +|+.++.. .++.+|.||.|+|...
T Consensus 82 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 82 EPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNH 143 (381)
T ss_dssp SEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGG
T ss_pred eeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCc
Confidence 000001233444566666779999988 45555431 1257999999999875
No 403
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=95.12 E-value=0.1 Score=47.10 Aligned_cols=94 Identities=21% Similarity=0.286 Sum_probs=67.3
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh------
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY------ 79 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~------ 79 (1074)
+...|++++|+.+|+++-.. .+.++..+..+|..+...|++++|..+|.++-+.
T Consensus 19 ~~~~~~~~~A~~~~~~~~~~--------------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 78 (125)
T 1na0_A 19 YYKQGDYDEAIEYYQKALEL--------------------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAE 78 (125)
T ss_dssp HHHTTCHHHHHHHHHHHHHH--------------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHcCCHHHHHHHHHHHHHH--------------------CcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHH
Confidence 34567777777777766421 1345778888899999999999999999886432
Q ss_pred --hhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcC
Q psy14927 80 --LSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSG 119 (1074)
Q Consensus 80 --~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g 119 (1074)
..+..++...|++++|.+..+. +.+..+...++..+..+|
T Consensus 79 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 79 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 3456668889999999887653 456667777777766544
No 404
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.12 E-value=0.019 Score=69.60 Aligned_cols=50 Identities=20% Similarity=0.150 Sum_probs=32.9
Q ss_pred HHHHhhhCCeEEEee-eEEEe--cCCeE-EEEe---CCCCeeEEEcCeEEEccCCCC
Q psy14927 848 IAHLFKSNKVTQLNG-HGKIT--GPNTV-TVIK---SDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 848 ~~~~l~~~gV~~~~g-~v~~i--d~~~~-~v~~---~~G~~~~i~~d~lIIATG~~p 897 (1074)
+.+.+.+.||+++.+ .|+.+ +.+.+ .|.. .+|+...+.++.||+|||+..
T Consensus 161 L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 161 LYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 444455679999998 45554 33322 1222 466555799999999999864
No 405
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=95.10 E-value=0.015 Score=69.08 Aligned_cols=100 Identities=12% Similarity=0.042 Sum_probs=0.0
Q ss_pred hhhhhccccchHHHHHHHhh--------hhhhhcccccc-----------------ccchh-------------------
Q psy14927 796 VVLNTLGNCAAVQANYHLAT--------KLFTQAGDKGV-----------------KLNLE------------------- 831 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~--------~l~e~~~~~g~-----------------~~~~~------------------- 831 (1074)
+|||||||++|+++|+.|++ +|+|+.+.... .+...
T Consensus 4 dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~~~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~~~~~~~~~~~~w 83 (511)
T 2weu_A 4 SVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVRRIGVGEATFSTVRHFFDYLGLDEREWLPRCAGGYKLGIRFENW 83 (511)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC-------CCEECCTTHHHHHHHHTCCHHHHHHHTTCEEECEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCCceeeccccCcchHHHHHHcCCCHHHHHHHcCCeEeccceecCC
Q ss_pred -----------------------------------------------------------------h--------------
Q psy14927 832 -----------------------------------------------------------------T-------------- 832 (1074)
Q Consensus 832 -----------------------------------------------------------------~-------------- 832 (1074)
.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 163 (511)
T 2weu_A 84 SEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAEQRAQ 163 (511)
T ss_dssp SSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGGCCSC
T ss_pred CCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccccCcCC
Q ss_pred hhhhhhHHHhhhhhhHHHHhhhCCeEEEeeeEEEec--CCe--EEEEeCCCCeeEEEcCeEEEccCCCC
Q psy14927 833 MMGTKSAAVKALTGGIAHLFKSNKVTQLNGHGKITG--PNT--VTVIKSDGSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 833 ~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~v~~id--~~~--~~v~~~~G~~~~i~~d~lIIATG~~p 897 (1074)
......-....+...+.+.+...||+++.++|+.+. .+. ..|++.+| .++.+|.||.|+|...
T Consensus 164 ~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~~v~~i~~~~~~~~~~v~~~~g--~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 164 FPYAYHFDADEVARYLSEYAIARGVRHVVDDVQHVGQDERGWISGVHTKQH--GEISGDLFVDCTGFRG 230 (511)
T ss_dssp CSCEEEECHHHHHHHHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEESSS--CEEECSEEEECCGGGC
T ss_pred CCeeEEEcHHHHHHHHHHHHHHCCCEEEECeEeEEEEcCCCCEEEEEECCC--CEEEcCEEEECCCcch
No 406
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=95.09 E-value=0.019 Score=66.48 Aligned_cols=54 Identities=19% Similarity=0.224 Sum_probs=41.3
Q ss_pred hhhHHHHhhhCCeEEEee-eEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 845 TGGIAHLFKSNKVTQLNG-HGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 845 ~~~~~~~l~~~gV~~~~g-~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
...+.+.+++.||+++.+ .++.++.+.+.+...+++..++.+|.||+|+|..|.
T Consensus 203 ~~~l~~~l~~~GV~i~~~~~v~~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~~ 257 (430)
T 3h28_A 203 KRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECC
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEeCCeEEEEecCCCceEEeeeEEEECCCCccc
Confidence 344667788899999998 688888887665443333478999999999998763
No 407
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=95.07 E-value=0.068 Score=57.68 Aligned_cols=123 Identities=14% Similarity=0.061 Sum_probs=88.1
Q ss_pred cCCHHHHHHHHHHcCcccchhhhHhhhc-------HHHHHHHhhc----------------------C------------
Q psy14927 9 NGDIDRAIRMFEKAETHQQHVPRMLLEN-------TDKLEKYIIQ----------------------S------------ 47 (1074)
Q Consensus 9 ~g~~~eA~~~Ye~~~~~~~~~~~~~~~~-------~~~~~~~~~~----------------------~------------ 47 (1074)
.++..+|.++|.++-..+...+...++. -..|..+-.. .
T Consensus 19 ~~d~~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l~a~~~~~g~y~~~~~~v 98 (282)
T 4f3v_A 19 PMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPV 98 (282)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGGCCEEECCTTTCCCEEEC
T ss_pred CCCHHHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhhccCCccccccccc
Confidence 5788889999988887776655444321 1122221111 0
Q ss_pred -CChHHHHHHHHHHHhccCHHHHHHHHHHhhC-------hhhhhhHhhccCCHHHHHHHHHhcCC-------hHHHHHHH
Q psy14927 48 -KDPVLLKWWAQYIESTEDMDLAMKYYEEARD-------YLSMVRVLCFLQDFSRAAELANASGD-------TAAAYHLA 112 (1074)
Q Consensus 48 -~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d-------~~~~vr~l~~~~~~~~a~~i~~~~~~-------~~~~~~la 112 (1074)
+-..++..||..+...|+|++|.+.|...-. ......++...++|++|....+.... .++.+.+|
T Consensus 99 ~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG 178 (282)
T 4f3v_A 99 TSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHG 178 (282)
T ss_dssp SSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHH
T ss_pred CCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHH
Confidence 1256888999999999999999999986521 12344458889999999998875432 34788999
Q ss_pred HHHHhcCChHHHHHHHHHh
Q psy14927 113 RQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 113 ~~~~~~g~~~~Ai~~y~~a 131 (1074)
..++..|++++|+..|.++
T Consensus 179 ~al~~LG~~~eAl~~l~~a 197 (282)
T 4f3v_A 179 VAAANLALFTEAERRLTEA 197 (282)
T ss_dssp HHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHH
Confidence 9999999999999998866
No 408
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.05 E-value=0.018 Score=67.30 Aligned_cols=49 Identities=12% Similarity=0.064 Sum_probs=32.6
Q ss_pred CCeEEEee-eEEEecC---C-eE-EEEeC---------------CCCeeEEEcCeEEEccCCCCCCCCCC
Q psy14927 855 NKVTQLNG-HGKITGP---N-TV-TVIKS---------------DGSTEEVKTKNILIATGSEVTPFPGI 903 (1074)
Q Consensus 855 ~gV~~~~g-~v~~id~---~-~~-~v~~~---------------~G~~~~i~~d~lIIATG~~p~~ipgi 903 (1074)
.||+|+++ .++.+.. . .+ .|.+. +|+..++.+|.||+|+|.+|.+++|+
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~l~gl 339 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPIDPS 339 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCCCCTT
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCCCCCC
Confidence 78999998 3555532 2 22 12222 34346799999999999998666665
No 409
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.04 E-value=0.037 Score=66.86 Aligned_cols=100 Identities=14% Similarity=0.058 Sum_probs=0.0
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhccccccccch--------------hhhhhhhhHHH---------------
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNL--------------ETMMGTKSAAV--------------- 841 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~--------------~~~~~~~~~~~--------------- 841 (1074)
+|||||||++|++||+.+++ +++|+.+..++...+ ...........
T Consensus 9 DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~~ 88 (588)
T 2wdq_A 9 DAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYM 88 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Q ss_pred ------------------------------------------------------hhhhhhHHHHhhhCCeEEEee-eEEE
Q psy14927 842 ------------------------------------------------------KALTGGIAHLFKSNKVTQLNG-HGKI 866 (1074)
Q Consensus 842 ------------------------------------------------------~~l~~~~~~~l~~~gV~~~~g-~v~~ 866 (1074)
..+...+.+.+.+.||+++.+ .|+.
T Consensus 89 ~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v~~ 168 (588)
T 2wdq_A 89 CKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALD 168 (588)
T ss_dssp HHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEEETEEEEE
T ss_pred HHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEEEeCcEEEE
Q ss_pred e----cCCeEEEEe---CCCCeeEEEcCeEEEccCC
Q psy14927 867 T----GPNTVTVIK---SDGSTEEVKTKNILIATGS 895 (1074)
Q Consensus 867 i----d~~~~~v~~---~~G~~~~i~~d~lIIATG~ 895 (1074)
+ +..-..|.. .+|+...+.++.||+|||.
T Consensus 169 L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 169 LVKNQDGAVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp EEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred EEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCC
No 410
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=95.03 E-value=0.093 Score=66.21 Aligned_cols=57 Identities=19% Similarity=0.365 Sum_probs=44.2
Q ss_pred CHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeE-EEEEeeccCCCCceEEEcCEEEEccCCcc
Q psy14927 947 DGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNI-TVTIENVKDPTKKEELSCDALLVCVGRRP 1010 (1074)
Q Consensus 947 ~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~~~~i~~D~vi~a~G~~p 1010 (1074)
+..+...+.+.+++.|++++.++.|+++..+++++ .|.+.+ + ++.+|.||+|+|...
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~------G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTAD------G-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETT------E-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECC------c-EEECCEEEECCccch
Confidence 34677778888899999999999999998766654 344322 2 799999999999753
No 411
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=95.02 E-value=0.055 Score=54.71 Aligned_cols=116 Identities=11% Similarity=-0.015 Sum_probs=77.0
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHH-HHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh----
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTD-KLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY---- 79 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~---- 79 (1074)
.+...|++++|+.+|+++-.....-+........ ....+ ...++..+|..+...|++++|.++|.++-..
T Consensus 47 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~ 121 (198)
T 2fbn_A 47 EFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNI-----EISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNN 121 (198)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHH-----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHH-----HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc
Confidence 3456788888888888876433221110000000 00000 1368888899999999999999999986432
Q ss_pred ----hhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChHHHH
Q psy14927 80 ----LSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFDEAI 125 (1074)
Q Consensus 80 ----~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~~Ai 125 (1074)
..+..+|..+|++++|.+..+. +.+..+...++..+...|+..++.
T Consensus 122 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 122 VKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3456668899999999887663 467778888888888888776665
No 412
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=94.95 E-value=0.55 Score=56.70 Aligned_cols=140 Identities=17% Similarity=0.113 Sum_probs=78.7
Q ss_pred HHHHHHhccCHHHHHHHHHHhhChhhhhhH---hhccCCHHHHHHHHH-hcCChH--HHHHHHHHHH--hcCChHHHHHH
Q psy14927 56 WAQYIESTEDMDLAMKYYEEARDYLSMVRV---LCFLQDFSRAAELAN-ASGDTA--AAYHLARQYE--NSGQFDEAIHF 127 (1074)
Q Consensus 56 ~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~---l~~~~~~~~a~~i~~-~~~~~~--~~~~la~~~~--~~g~~~~Ai~~ 127 (1074)
|.+.+.=.|+|+.|.++-.+- ....+|.+ |...|-+..-..+.. +++++. .+..+.+|-. +..|..+|++|
T Consensus 300 Yf~vLlLtgqFE~AI~~L~~~-~~vdAVH~AIaL~~~gLL~~~~~lls~~~~~~~lN~arLI~~Yt~~F~~td~~~Al~Y 378 (661)
T 2qx5_A 300 YLQTLLLSGLYGLAIDYTYTF-SEMDAVHLAIGLASLKLFKIDSSTRLTKKPKRDIRFANILANYTKSFRYSDPRVAVEY 378 (661)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-CHHHHHHHHHHHHHTTC-----------------CHHHHHHHHHTTTTTTCHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHhc-CchhHHHHHHHHHHcCCccCCCcccccCCCcccccHHHHHHHHHHHhhcCCHHHHHHH
Confidence 455556678888887765555 55566666 555555542111111 112111 2333333322 67899999999
Q ss_pred HHHhCCh--HHHHHHHHH--------hCchHHHHH-----------Hhhhc-------C-----chhHHHHHHHHcc-CC
Q psy14927 128 YSVAGSC--GNAVRLCKE--------QALDDQLWN-----------LALSA-------G-----PSEQIEAATYLET-IE 173 (1074)
Q Consensus 128 y~~a~~~--~~A~~la~~--------~~~~~~~~~-----------l~~~~-------~-----~~~~~~~A~~~e~-~~ 173 (1074)
|...... .+...+|.+ -+.++.++. +.... . ......+|.-.+. |.
T Consensus 379 ~~li~l~~g~~~~~~~~~~l~eLvletr~f~~LLG~i~~dG~r~~G~i~~~~~li~l~d~~~~~~~i~~~aA~~ae~~G~ 458 (661)
T 2qx5_A 379 LVLITLNEGPTDVELCHEALRELVLETKEFTVLLGKIGRDGARIPGVIEERQPLLHVRDEKEFLHTITEQAARRADEDGR 458 (661)
T ss_dssp HHGGGGSCCHHHHHHHHHHHHHHHHHHCCHHHHHCEECTTSCEECCHHHHTCGGGTCSCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhccCCchHHHHHHHHHHHHHHhcccHHHHcCCcCCCCCcCcchHHHhhcccccccHHHHHHHHHHHHHHHHHHCCC
Confidence 9987443 334444443 233333321 11111 1 1223457888888 67
Q ss_pred hhHHHHHHHHhCChHHHHHHHHh
Q psy14927 174 PDKAVLLYHKAGALHKALDLAFK 196 (1074)
Q Consensus 174 ~~~A~~ly~kaG~~~kAl~l~~~ 196 (1074)
++.|+.||+.||++.+|++++-+
T Consensus 459 ~~dAi~LY~La~~~d~vl~lln~ 481 (661)
T 2qx5_A 459 IYDSILLYQLAEEYDIVITLVNS 481 (661)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHH
Confidence 99999999999999999999877
No 413
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=94.92 E-value=0.16 Score=48.96 Aligned_cols=82 Identities=15% Similarity=0.064 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHh-----hC---HHHHHHHHHHcCCHHHHHHHHH-----hcCCcHHHHHHHHHHH
Q psy14927 624 RVLLKWWAQYIESTEDMDLAMKYYEEA-----RD---YLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYE 690 (1074)
Q Consensus 624 ~~l~~~~a~~~e~~~~~~~A~~~y~~a-----g~---~~~ai~~~~~~~~~~~a~~v~~-----~~~~~~~~~~~A~~~~ 690 (1074)
+..+...|...-..|+|++|+.+|.++ .+ |-..-.+|...++|++|+...+ ..+.......+|..+.
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~ 100 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLL 100 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHH
Confidence 456777888999999999999999987 22 2334456889999999997774 2344555568999999
Q ss_pred hcCCHHHHHHHHHHc
Q psy14927 691 NSGQFDEAIHFYSVA 705 (1074)
Q Consensus 691 ~~g~~~~A~~~~~ka 705 (1074)
..|++++|+.+|-++
T Consensus 101 ~~g~~~~A~~~~~~a 115 (148)
T 2vgx_A 101 QXGELAEAESGLFLA 115 (148)
T ss_dssp HTTCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHH
Confidence 999999999988665
No 414
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=94.85 E-value=0.093 Score=57.80 Aligned_cols=85 Identities=18% Similarity=0.252 Sum_probs=63.8
Q ss_pred hhHHhhcCCcEEEEecCCccC--------------CCCC----CHHHHHHHHHHHHhCCCEEEeCceEEEEEecCC-eEE
Q psy14927 922 GSVWGRLGAEVTAIEFMNAIG--------------GMGI----DGEVAKQFQRILGKQGMQFKLGTKVTGASKSGD-NIT 982 (1074)
Q Consensus 922 A~~l~~~G~~Vtlv~~~~~~~--------------~~~~----~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~-~~~ 982 (1074)
|..|++.|.+|+|+++.+.+. .+.+ ..++...+.+.+++.|+++++++.|..+...++ ...
T Consensus 23 A~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~ 102 (332)
T 3lzw_A 23 AFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFK 102 (332)
T ss_dssp HHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEE
T ss_pred HHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEE
Confidence 556778899999999876432 0111 256777788888889999999999999988765 455
Q ss_pred EEEeeccCCCCceEEEcCEEEEccCC---cccCC
Q psy14927 983 VTIENVKDPTKKEELSCDALLVCVGR---RPYTH 1013 (1074)
Q Consensus 983 v~~~~~~~~g~~~~i~~D~vi~a~G~---~p~~~ 1013 (1074)
|.+.+ + ++.+|.||+|+|. .|...
T Consensus 103 v~~~~------g-~~~~d~vVlAtG~~~~~p~~~ 129 (332)
T 3lzw_A 103 LVTNE------E-THYSKTVIITAGNGAFKPRKL 129 (332)
T ss_dssp EEESS------E-EEEEEEEEECCTTSCCEECCC
T ss_pred EEECC------C-EEEeCEEEECCCCCcCCCCCC
Confidence 65543 2 3999999999999 77654
No 415
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=94.81 E-value=0.08 Score=48.09 Aligned_cols=71 Identities=14% Similarity=0.163 Sum_probs=56.3
Q ss_pred CCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHH
Q psy14927 47 SKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIH 126 (1074)
Q Consensus 47 ~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~ 126 (1074)
++++..+..+|..+...|++++|.++|.++-.. .+.+..+.+.+|..|...|++++|++
T Consensus 16 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---------------------~p~~~~~~~~la~~~~~~g~~~~A~~ 74 (115)
T 2kat_A 16 TDNMLLRFTLGKTYAEHEQFDAALPHLRAALDF---------------------DPTYSVAWKWLGKTLQGQGDRAGARQ 74 (115)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------------CTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHH---------------------CCCcHHHHHHHHHHHHHcCCHHHHHH
Confidence 467889999999999999999999999776432 23456678899999999999999999
Q ss_pred HHHHhCChHHHHHHHHHh
Q psy14927 127 FYSVAGSCGNAVRLCKEQ 144 (1074)
Q Consensus 127 ~y~~a~~~~~A~~la~~~ 144 (1074)
+|. .|+++....
T Consensus 75 ~~~------~al~~~~~~ 86 (115)
T 2kat_A 75 AWE------SGLAAAQSR 86 (115)
T ss_dssp HHH------HHHHHHHHH
T ss_pred HHH------HHHHhcccc
Confidence 875 445555444
No 416
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=94.80 E-value=0.18 Score=46.33 Aligned_cols=81 Identities=20% Similarity=0.124 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHh-----hC---HHHHHHHHHHcCCHHHHHHHHH----hc-CCcHHHHHHHHHHHh
Q psy14927 625 VLLKWWAQYIESTEDMDLAMKYYEEA-----RD---YLSMVRVLCFLQDFSRAAELAN----AS-GDTAAAYHLARQYEN 691 (1074)
Q Consensus 625 ~l~~~~a~~~e~~~~~~~A~~~y~~a-----g~---~~~ai~~~~~~~~~~~a~~v~~----~~-~~~~~~~~~A~~~~~ 691 (1074)
+.+...|...-..|+|++|+.+|.++ ++ +-....+|...++|++|++.++ .. +.......+|..+..
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 84 (126)
T 3upv_A 5 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA 84 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 45666777888889999999999887 22 3445566888999999987763 22 333444488999999
Q ss_pred cCCHHHHHHHHHHc
Q psy14927 692 SGQFDEAIHFYSVA 705 (1074)
Q Consensus 692 ~g~~~~A~~~~~ka 705 (1074)
.|++++|+++|.++
T Consensus 85 ~~~~~~A~~~~~~a 98 (126)
T 3upv_A 85 VKEYASALETLDAA 98 (126)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHH
Confidence 99999998888765
No 417
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=94.80 E-value=0.088 Score=59.55 Aligned_cols=82 Identities=18% Similarity=0.222 Sum_probs=67.7
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhhC------------------------hhhhhhHhhccCCHHHHHHHHHh----
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEARD------------------------YLSMVRVLCFLQDFSRAAELANA---- 101 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~d------------------------~~~~vr~l~~~~~~~~a~~i~~~---- 101 (1074)
...+...|..+...|+|++|+++|.++=. +.++..+|..+|++++|.+..+.
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 34577889999999999999999998765 23566668889999999888763
Q ss_pred -cCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 102 -SGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 102 -~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
+.+..+.+.+|..|...|++++|++.|.++
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~A 333 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKEYDQALADLKKA 333 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 456778899999999999999999887754
No 418
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=94.77 E-value=0.057 Score=59.21 Aligned_cols=85 Identities=18% Similarity=0.258 Sum_probs=61.5
Q ss_pred hhHHhhcCCcEEEEecC--CccC-------CCCC----CHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeec
Q psy14927 922 GSVWGRLGAEVTAIEFM--NAIG-------GMGI----DGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENV 988 (1074)
Q Consensus 922 A~~l~~~G~~Vtlv~~~--~~~~-------~~~~----~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~ 988 (1074)
|..|.+.|.+|+|+++. .... .+.+ ..++...+.+.+++.||+++. ..+..+..+++...+.+.+
T Consensus 31 A~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~- 108 (323)
T 3f8d_A 31 ALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTKR- 108 (323)
T ss_dssp HHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEESS-
T ss_pred HHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEECC-
Confidence 66777889999999985 1110 0122 256777778888899999999 8899998866555665443
Q ss_pred cCCCCceEEEcCEEEEccCCcccCC
Q psy14927 989 KDPTKKEELSCDALLVCVGRRPYTH 1013 (1074)
Q Consensus 989 ~~~g~~~~i~~D~vi~a~G~~p~~~ 1013 (1074)
+.++.+|.||+|+|..|...
T Consensus 109 -----g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 109 -----KGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp -----SCEEEEEEEEECCCCEECCC
T ss_pred -----CCEEEcCEEEECcCCCCccC
Confidence 45899999999999987654
No 419
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=94.76 E-value=0.1 Score=63.96 Aligned_cols=60 Identities=10% Similarity=0.238 Sum_probs=41.8
Q ss_pred HHHHHHHHHHhCC---CEEEeCceEEEEEecC--------CeEEEEEeecc-----------------------------
Q psy14927 950 VAKQFQRILGKQG---MQFKLGTKVTGASKSG--------DNITVTIENVK----------------------------- 989 (1074)
Q Consensus 950 ~~~~~~~~l~~~g---V~i~~~~~v~~i~~~~--------~~~~v~~~~~~----------------------------- 989 (1074)
+.+.+.+.+.+.| |++.+++.++.++.++ +++.+++.+..
T Consensus 121 le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d 200 (665)
T 1pn0_A 121 IERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEED 200 (665)
T ss_dssp HHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEEEeccccccccccccccccccccccccccccccc
Confidence 4455666677666 8999999999987653 35777766410
Q ss_pred ---------CCCCceEEEcCEEEEccCCc
Q psy14927 990 ---------DPTKKEELSCDALLVCVGRR 1009 (1074)
Q Consensus 990 ---------~~g~~~~i~~D~vi~a~G~~ 1009 (1074)
.+|..+++.+|.||-|-|..
T Consensus 201 ~~~~~~~~~~~G~~~~i~A~~VVGADG~~ 229 (665)
T 1pn0_A 201 ANYRLPEGKEAGEIETVHCKYVIGCDGGH 229 (665)
T ss_dssp TSCCCSTTCCTTCEEEEEEEEEEECCCTT
T ss_pred ccccccccCCCCceEEEEeCEEEeccCCC
Confidence 02444789999999998864
No 420
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=94.72 E-value=0.095 Score=58.32 Aligned_cols=83 Identities=17% Similarity=0.107 Sum_probs=67.5
Q ss_pred ChHHHHHHHHHHHhccCHHHHHHHHHHhhC-----------------------hhhhhhHhhccCCHHHHHHHHH-----
Q psy14927 49 DPVLLKWWAQYIESTEDMDLAMKYYEEARD-----------------------YLSMVRVLCFLQDFSRAAELAN----- 100 (1074)
Q Consensus 49 ~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d-----------------------~~~~vr~l~~~~~~~~a~~i~~----- 100 (1074)
....+..+|..+...|+|++|.++|.++=. +.++..+|..+|++++|.+..+
T Consensus 146 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 225 (336)
T 1p5q_A 146 QSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALEL 225 (336)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 356788889999999999999999998633 2345566888999999988776
Q ss_pred hcCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 101 ASGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 101 ~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
.+.+..+.+.+|..|...|++++|++.|.++
T Consensus 226 ~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 256 (336)
T 1p5q_A 226 DSNNEKGLSRRGEAHLAVNDFELARADFQKV 256 (336)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 3567788889999999999999999887653
No 421
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=94.70 E-value=0.049 Score=66.53 Aligned_cols=100 Identities=18% Similarity=0.106 Sum_probs=0.0
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhccccccccchh---------------------------------------
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLE--------------------------------------- 831 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~--------------------------------------- 831 (1074)
+|||||||++|++||+.+++ +++++....++...+.
T Consensus 7 DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~~~~dt~~~g~~~~d~~~v 86 (660)
T 2bs2_A 7 DSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGCDQKVA 86 (660)
T ss_dssp SEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHHHHHHHHHhcCCCCCHHHH
Q ss_pred -hhhhhhhHHHhhhhhh------------------------------------------------------------HHH
Q psy14927 832 -TMMGTKSAAVKALTGG------------------------------------------------------------IAH 850 (1074)
Q Consensus 832 -~~~~~~~~~~~~l~~~------------------------------------------------------------~~~ 850 (1074)
.+.......++.+... +.+
T Consensus 87 ~~~~~~s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~~~gg~~~~R~~~~~d~tG~~l~~~L~~ 166 (660)
T 2bs2_A 87 RMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGHTMLFAVAN 166 (660)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhhhccccccccccceeEeeCCCCHHHHHHHHHH
Q ss_pred HhhhCCeEEEee-eEEEe--cCC---eEEEEe-CCCCeeEEEcCeEEEccCC
Q psy14927 851 LFKSNKVTQLNG-HGKIT--GPN---TVTVIK-SDGSTEEVKTKNILIATGS 895 (1074)
Q Consensus 851 ~l~~~gV~~~~g-~v~~i--d~~---~~~v~~-~~G~~~~i~~d~lIIATG~ 895 (1074)
.+.+.||+++.+ .|+.+ +.+ .+.+.. .+|....+.++.||+|||.
T Consensus 167 ~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 167 ECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCc
No 422
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.61 E-value=0.023 Score=65.29 Aligned_cols=52 Identities=6% Similarity=0.134 Sum_probs=41.7
Q ss_pred hhhhhHHHHhhhCCeEEEee-eEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 843 ALTGGIAHLFKSNKVTQLNG-HGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 843 ~l~~~~~~~l~~~gV~~~~g-~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
.+...+.+.+++.||+++.+ .++.++.+. |++++| .++.+|.||+|||..|.
T Consensus 219 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~--v~~~~g--~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 219 NSRKAVASIYNQLGIKLVHNFKIKEIREHE--IVDEKG--NTIPADITILLPPYTGN 271 (409)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEECSSE--EEETTS--CEEECSEEEEECCEECC
T ss_pred HHHHHHHHHHHHCCCEEEcCCceEEECCCe--EEECCC--CEEeeeEEEECCCCCcc
Confidence 34445677778889999998 588888775 566788 68999999999999874
No 423
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=94.52 E-value=0.23 Score=47.04 Aligned_cols=81 Identities=17% Similarity=0.083 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHh-----hC---HHHHHHHHHHcCCHHHHHHHHH-----hcCCcHHHHHHHHHHHh
Q psy14927 625 VLLKWWAQYIESTEDMDLAMKYYEEA-----RD---YLSMVRVLCFLQDFSRAAELAN-----ASGDTAAAYHLARQYEN 691 (1074)
Q Consensus 625 ~l~~~~a~~~e~~~~~~~A~~~y~~a-----g~---~~~ai~~~~~~~~~~~a~~v~~-----~~~~~~~~~~~A~~~~~ 691 (1074)
..+...|...-..|+|++|+.+|.++ .+ |-..-.+|...+++++|+...+ ..+.......+|..+..
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 98 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQ 98 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Confidence 56677888888899999999999887 22 2334456888999999987663 24445555588999999
Q ss_pred cCCHHHHHHHHHHc
Q psy14927 692 SGQFDEAIHFYSVA 705 (1074)
Q Consensus 692 ~g~~~~A~~~~~ka 705 (1074)
.|++++|+.+|-++
T Consensus 99 ~g~~~~A~~~~~~a 112 (142)
T 2xcb_A 99 LGDLDGAESGFYSA 112 (142)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH
Confidence 99999999988665
No 424
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=94.52 E-value=0.012 Score=68.64 Aligned_cols=89 Identities=19% Similarity=0.135 Sum_probs=51.8
Q ss_pred chhhhhhccccchHHHHHHHhh------hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEeee-EEE
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT------KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNGH-GKI 866 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~------~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g~-v~~ 866 (1074)
.++|+|||||..|+.+|..+.+ +++...+.. . ++.... + ...+...||+|+++. ++.
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~----~---~p~~~~----e-----~~~~~~~Gv~~~~~~~~~~ 327 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK----N---MPGSQR----E-----VAHAEEEGVEFIWQAAPEG 327 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST----T---CSSCHH----H-----HHHHHHTTCEEECCSSSCC
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc----C---CCCCHH----H-----HHHHHHCCCEEEeCCCceE
Confidence 3459999999999999998877 233222211 0 111111 1 234566799998872 333
Q ss_pred ecCCe----EEEE---e----C---------CCCeeEEEcCeEEEccCCCCC
Q psy14927 867 TGPNT----VTVI---K----S---------DGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 867 id~~~----~~v~---~----~---------~G~~~~i~~d~lIIATG~~p~ 898 (1074)
+..+. +++. + . +|+..++.+|.||+|+|..|.
T Consensus 328 i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~ 379 (456)
T 2vdc_G 328 FTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPE 379 (456)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECC
T ss_pred EeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCC
Confidence 32211 1111 0 1 233357999999999999874
No 425
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=94.49 E-value=0.21 Score=49.27 Aligned_cols=106 Identities=11% Similarity=0.055 Sum_probs=67.9
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHh-------h-h---c---HHHHHHHhh-cCCChHHHHHHHHHHHhccCHHHHH
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRML-------L-E---N---TDKLEKYII-QSKDPVLLKWWAQYIESTEDMDLAM 70 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~-------~-~---~---~~~~~~~~~-~~~~~~l~~~~a~~~e~~~~~~~A~ 70 (1074)
+...|++++|+..|+++-..+. -+... + . . -..++..+. .++++..+..+|..+...|++++|.
T Consensus 50 ~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~ 128 (176)
T 2r5s_A 50 LLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEAL 128 (176)
T ss_dssp HHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHH
Confidence 4678999999999999875542 11111 0 1 0 112222222 2456777777777777777777777
Q ss_pred HHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 71 KYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 71 ~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
.+|.++=.. +| ...+..+...++..|...|+.++|+..|.++
T Consensus 129 ~~~~~~l~~-----------~p--------~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~a 170 (176)
T 2r5s_A 129 ELLWNILKV-----------NL--------GAQDGEVKKTFMDILSALGQGNAIASKYRRQ 170 (176)
T ss_dssp HHHHHHHTT-----------CT--------TTTTTHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred HHHHHHHHh-----------Cc--------ccChHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 777654322 11 1123557789999999999999999998753
No 426
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=94.37 E-value=0.039 Score=64.44 Aligned_cols=50 Identities=14% Similarity=0.191 Sum_probs=33.4
Q ss_pred CCeEEEee-eEEEecCC-e---EEEEe--------------CCCCeeEEEcCeEEEccCCCCCCCCCCC
Q psy14927 855 NKVTQLNG-HGKITGPN-T---VTVIK--------------SDGSTEEVKTKNILIATGSEVTPFPGIE 904 (1074)
Q Consensus 855 ~gV~~~~g-~v~~id~~-~---~~v~~--------------~~G~~~~i~~d~lIIATG~~p~~ipgi~ 904 (1074)
.||+|+++ .++.+..+ . +++.. .+|+..++.+|.||+|+|.+|.++++++
T Consensus 265 ~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~l~gl~ 333 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPTPGLP 333 (456)
T ss_dssp EEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCCCTTSC
T ss_pred ceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCCCCCCc
Confidence 68999998 46666543 1 33321 1343357999999999999986555554
No 427
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=94.30 E-value=0.03 Score=69.46 Aligned_cols=92 Identities=14% Similarity=0.125 Sum_probs=60.3
Q ss_pred hhhhhhc--cccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEE
Q psy14927 795 QVVLNTL--GNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKI 866 (1074)
Q Consensus 795 ~~VviiG--gG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~ 866 (1074)
++|+||| ||+.|+.+|..|++ ++++..+ .... ... ......+.+.+++.||+++.+ .++.
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~---~~~--------~~~~~~~~~~l~~~GV~i~~~~~v~~ 596 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANY---MHF--------TLEYPNMMRRLHELHVEELGDHFCSR 596 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHH---HHH--------TTCHHHHHHHHHHTTCEEECSEEEEE
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccc---ccc--------cccHHHHHHHHHhCCCEEEcCcEEEE
Confidence 3499999 99999999999988 3343322 1100 000 001223556677889999999 5888
Q ss_pred ecCCeEEEEe--CCCC-----------------eeEEEcCeEEEccCCCCC
Q psy14927 867 TGPNTVTVIK--SDGS-----------------TEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 867 id~~~~~v~~--~~G~-----------------~~~i~~d~lIIATG~~p~ 898 (1074)
++.+.+.+.. .++. ..++.+|.||+|+|..|.
T Consensus 597 i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~ 647 (729)
T 1o94_A 597 IEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSE 647 (729)
T ss_dssp EETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEEC
T ss_pred EECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCC
Confidence 8877665543 2221 123999999999999874
No 428
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=94.18 E-value=0.26 Score=47.82 Aligned_cols=82 Identities=16% Similarity=0.073 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHhh-----C---HHHHHHHHHHcCCHHHHHHHHH----h-cCCcHHHHHHHHHHH
Q psy14927 624 RVLLKWWAQYIESTEDMDLAMKYYEEAR-----D---YLSMVRVLCFLQDFSRAAELAN----A-SGDTAAAYHLARQYE 690 (1074)
Q Consensus 624 ~~l~~~~a~~~e~~~~~~~A~~~y~~ag-----~---~~~ai~~~~~~~~~~~a~~v~~----~-~~~~~~~~~~A~~~~ 690 (1074)
+..+...|......|+|++|+.+|.++= + +-....+|...++|++|++.++ . .........+|..+.
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 90 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARF 90 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 3567778888888889999999998872 2 2344555788888888886663 2 223333447788888
Q ss_pred hcCCHHHHHHHHHHc
Q psy14927 691 NSGQFDEAIHFYSVA 705 (1074)
Q Consensus 691 ~~g~~~~A~~~~~ka 705 (1074)
..|++++|+++|.++
T Consensus 91 ~~g~~~~A~~~~~~a 105 (164)
T 3sz7_A 91 DMADYKGAKEAYEKG 105 (164)
T ss_dssp HTTCHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHH
Confidence 888888888877654
No 429
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=94.04 E-value=0.067 Score=63.66 Aligned_cols=58 Identities=19% Similarity=0.324 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeE-EEEEeeccCCCCceEEEcCEEEEccCCccc
Q psy14927 948 GEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNI-TVTIENVKDPTKKEELSCDALLVCVGRRPY 1011 (1074)
Q Consensus 948 ~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~ 1011 (1074)
+.+...+.+.+++.||+++++++|+++..+++.+ .|++.+ +.++.+|.||+|+|..+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~------G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSN------GEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETT------SCEEECSCEEECCCTTCH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECC------CCEEECCEEEECCCCChh
Confidence 4556667778888999999999999998766553 355543 457999999999999885
No 430
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=94.00 E-value=0.54 Score=57.47 Aligned_cols=54 Identities=11% Similarity=0.086 Sum_probs=40.7
Q ss_pred CCChHHHHHHHHHHHhccCHHHHH-HHHHHhhCh--------hhhhhHhhccCCHHHHHHHHH
Q psy14927 47 SKDPVLLKWWAQYIESTEDMDLAM-KYYEEARDY--------LSMVRVLCFLQDFSRAAELAN 100 (1074)
Q Consensus 47 ~~~~~l~~~~a~~~e~~~~~~~A~-~~y~~a~d~--------~~~vr~l~~~~~~~~a~~i~~ 100 (1074)
+..+.+|..||++.+..|+.++|. +.|.+|=.. ...+.+....|++++|.++..
T Consensus 340 p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iye 402 (679)
T 4e6h_A 340 CFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTIL 402 (679)
T ss_dssp TTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 678999999999999999998886 888886432 234444556777777777655
No 431
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=93.96 E-value=0.32 Score=45.06 Aligned_cols=82 Identities=20% Similarity=0.095 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHh--------hCHHHHHHHHHHcCCHHHHHHHHH----hcC-CcHHHHHHHHHHH
Q psy14927 624 RVLLKWWAQYIESTEDMDLAMKYYEEA--------RDYLSMVRVLCFLQDFSRAAELAN----ASG-DTAAAYHLARQYE 690 (1074)
Q Consensus 624 ~~l~~~~a~~~e~~~~~~~A~~~y~~a--------g~~~~ai~~~~~~~~~~~a~~v~~----~~~-~~~~~~~~A~~~~ 690 (1074)
+..+...|...-..|+|++|+.+|.++ .-+-....+|...++|++|...++ ..+ .......+|..+.
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 88 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 88 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHH
Confidence 457778888888999999999999887 223445566888999999987763 223 3344448899999
Q ss_pred hcCCHHHHHHHHHHc
Q psy14927 691 NSGQFDEAIHFYSVA 705 (1074)
Q Consensus 691 ~~g~~~~A~~~~~ka 705 (1074)
..|+++.|+.+|.++
T Consensus 89 ~~~~~~~A~~~~~~a 103 (137)
T 3q49_B 89 EMESYDEAIANLQRA 103 (137)
T ss_dssp HTTCHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHH
Confidence 999999999888766
No 432
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=93.92 E-value=0.024 Score=72.55 Aligned_cols=83 Identities=17% Similarity=0.175 Sum_probs=56.7
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEec
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITG 868 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id 868 (1074)
++|+|||||+.|+.+|..+++ ++++..+... . . .+.+++.||+|+.+ .++.+.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~---------~-------~-----~~~l~~~GV~v~~~~~v~~i~ 343 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS---------A-------A-----AAQAVADGVQVISGSVVVDTE 343 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC---------H-------H-----HHHHHHTTCCEEETEEEEEEE
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc---------h-------h-----HHHHHhCCeEEEeCCEeEEEe
Confidence 349999999999999999987 3444433221 0 0 34467789999999 466665
Q ss_pred C--C-eE-EEEeCC-------CCeeEEEcCeEEEccCCCCC
Q psy14927 869 P--N-TV-TVIKSD-------GSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 869 ~--~-~~-~v~~~~-------G~~~~i~~d~lIIATG~~p~ 898 (1074)
. + .+ .|++.+ |+..++.+|.||+|+|.+|.
T Consensus 344 ~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~ 384 (965)
T 2gag_A 344 ADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPV 384 (965)
T ss_dssp ECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEEC
T ss_pred ccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcC
Confidence 3 2 11 344332 43468999999999999874
No 433
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=93.87 E-value=0.17 Score=58.90 Aligned_cols=85 Identities=13% Similarity=0.130 Sum_probs=70.3
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhhCh-----------------------hhhhhHhhccCCHHHHHHHHHh-----
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEARDY-----------------------LSMVRVLCFLQDFSRAAELANA----- 101 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~-----------------------~~~vr~l~~~~~~~~a~~i~~~----- 101 (1074)
...+...|..+...|+|++|+.+|.+|=.+ .++..+|..+|++++|.+..+.
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 347 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLD 347 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 457778899999999999999999986432 2556678889999999888763
Q ss_pred cCChHHHHHHHHHHHhcCChHHHHHHHHHhCCh
Q psy14927 102 SGDTAAAYHLARQYENSGQFDEAIHFYSVAGSC 134 (1074)
Q Consensus 102 ~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~ 134 (1074)
+.+..+.+.+|..|...|++++|++.|.++-..
T Consensus 348 p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l 380 (457)
T 1kt0_A 348 SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV 380 (457)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 677888999999999999999999988775443
No 434
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.86 E-value=0.25 Score=46.33 Aligned_cols=95 Identities=19% Similarity=0.075 Sum_probs=62.2
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh-----
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY----- 79 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~----- 79 (1074)
.+...|++++|+.+|+++-.....-+. .+.++..+|..+...|++++|.++|.++-..
T Consensus 37 ~~~~~~~~~~A~~~~~~a~~~~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~ 99 (148)
T 2dba_A 37 ELFKCGDYGGALAAYTQALGLDATPQD-----------------QAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDV 99 (148)
T ss_dssp HHHTTTCHHHHHHHHHHHHTSCCCHHH-----------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCH
T ss_pred HHHHhCCHHHHHHHHHHHHHHcccchH-----------------HHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCH
Confidence 456778888888888887654411000 1567777888888888888888888775322
Q ss_pred ---hhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHH
Q psy14927 80 ---LSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYE 116 (1074)
Q Consensus 80 ---~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~ 116 (1074)
..+..++..+|++++|.+..++ +.+......+++...
T Consensus 100 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 144 (148)
T 2dba_A 100 KALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISG 144 (148)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 2345557778888888776652 344555555555544
No 435
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=93.85 E-value=0.1 Score=60.06 Aligned_cols=57 Identities=16% Similarity=0.352 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcc
Q psy14927 947 DGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRP 1010 (1074)
Q Consensus 947 ~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p 1010 (1074)
...+.+.+.+.+++.||+++++++|+++..+++++.|.+.+ + ++.+|.||+|+|..+
T Consensus 131 ~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~------g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 131 AKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSA------G-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETT------E-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECC------c-EEEeeEEEECCCCcc
Confidence 35777888888999999999999999998877776665433 3 799999999999875
No 436
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=93.84 E-value=0.32 Score=47.11 Aligned_cols=83 Identities=17% Similarity=0.128 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHHHhhhcHHHHHHHHHHhhCH--------------------------HHHHHHHHHcCCHHHHHHHHH--
Q psy14927 623 YRVLLKWWAQYIESTEDMDLAMKYYEEARDY--------------------------LSMVRVLCFLQDFSRAAELAN-- 674 (1074)
Q Consensus 623 ~~~l~~~~a~~~e~~~~~~~A~~~y~~ag~~--------------------------~~ai~~~~~~~~~~~a~~v~~-- 674 (1074)
....+...|...-..|+|++|+.+|.+|=+. -+...+|...++|++|+..++
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 89 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEV 89 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 3346667777788888999999988877433 234456788888888887763
Q ss_pred --h-cCCcHHHHHHHHHHHhcCCHHHHHHHHHHc
Q psy14927 675 --A-SGDTAAAYHLARQYENSGQFDEAIHFYSVA 705 (1074)
Q Consensus 675 --~-~~~~~~~~~~A~~~~~~g~~~~A~~~~~ka 705 (1074)
. .........+|..+...|++++|+..|.++
T Consensus 90 l~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a 123 (162)
T 3rkv_A 90 LKREETNEKALFRRAKARIAAWKLDEAEEDLKLL 123 (162)
T ss_dssp HHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHH
Confidence 2 233344448888888899988888888665
No 437
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=93.70 E-value=0.18 Score=55.06 Aligned_cols=85 Identities=18% Similarity=0.252 Sum_probs=60.9
Q ss_pred hhHHhhcCC-cEEEEecCCc---c-------CCCCC-----CHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEE
Q psy14927 922 GSVWGRLGA-EVTAIEFMNA---I-------GGMGI-----DGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTI 985 (1074)
Q Consensus 922 A~~l~~~G~-~Vtlv~~~~~---~-------~~~~~-----~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~ 985 (1074)
|..+++.|. +|+++++... . ..+.+ .+.+...+.+.+.+.|++++. ..+..+..+++...+.+
T Consensus 17 A~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~ 95 (311)
T 2q0l_A 17 GLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILA 95 (311)
T ss_dssp HHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEE
T ss_pred HHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEE
Confidence 556777899 9999987521 0 00122 246677777888889999998 68999987666555554
Q ss_pred eeccCCCCceEEEcCEEEEccCCcccCC
Q psy14927 986 ENVKDPTKKEELSCDALLVCVGRRPYTH 1013 (1074)
Q Consensus 986 ~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 1013 (1074)
.+ +.++.+|.||+|+|..|...
T Consensus 96 ~~------g~~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 96 ED------GKTFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp TT------SCEEEEEEEEECCCEEECCC
T ss_pred cC------CCEEECCEEEECCCCCCCCC
Confidence 33 35799999999999887654
No 438
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=93.57 E-value=0.12 Score=58.92 Aligned_cols=83 Identities=11% Similarity=0.077 Sum_probs=58.4
Q ss_pred hhHHhhcCCcEEEEecCCccCCCCCCHHHHHH-------------HHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeec
Q psy14927 922 GSVWGRLGAEVTAIEFMNAIGGMGIDGEVAKQ-------------FQRILGKQGMQFKLGTKVTGASKSGDNITVTIENV 988 (1074)
Q Consensus 922 A~~l~~~G~~Vtlv~~~~~~~~~~~~~~~~~~-------------~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~ 988 (1074)
|..|...+.+|||+++.+.+. ...+.+... ..+.+++.||+++.+++|+.++.++. .|++.+
T Consensus 25 A~~L~~~~~~itlie~~~~~~--y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~--~v~~~~- 99 (385)
T 3klj_A 25 AKAALGKCDDITMINSEKYLP--YYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSIDPNNK--LVTLKS- 99 (385)
T ss_dssp HHHHTTTCSCEEEECSSSSCC--BCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEEETTTT--EEEETT-
T ss_pred HHHHhCCCCEEEEEECCCCCC--cccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEEECCCC--EEEECC-
Confidence 455566788999998887653 111222221 24566788999999999999987654 344443
Q ss_pred cCCCCceEEEcCEEEEccCCcccCCc
Q psy14927 989 KDPTKKEELSCDALLVCVGRRPYTHN 1014 (1074)
Q Consensus 989 ~~~g~~~~i~~D~vi~a~G~~p~~~~ 1014 (1074)
+.++.+|.+|+|||.+|....
T Consensus 100 -----g~~~~yd~lvlAtG~~p~~p~ 120 (385)
T 3klj_A 100 -----GEKIKYEKLIIASGSIANKIK 120 (385)
T ss_dssp -----SCEEECSEEEECCCEEECCCC
T ss_pred -----CCEEECCEEEEecCCCcCCCC
Confidence 458999999999999887643
No 439
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=93.57 E-value=0.079 Score=61.30 Aligned_cols=54 Identities=19% Similarity=0.224 Sum_probs=45.3
Q ss_pred hhhHHHHhhhCCeEEEee-eEEEecCCeEEEEeCCCCeeEEEcCeEEEccCCCCC
Q psy14927 845 TGGIAHLFKSNKVTQLNG-HGKITGPNTVTVIKSDGSTEEVKTKNILIATGSEVT 898 (1074)
Q Consensus 845 ~~~~~~~l~~~gV~~~~g-~v~~id~~~~~v~~~~G~~~~i~~d~lIIATG~~p~ 898 (1074)
...+.+.+++.||+++.+ .|+.++++.+.+...+|...++.+|.+|+++|.+|+
T Consensus 203 ~~~l~~~l~~~GV~~~~~~~v~~v~~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~ 257 (430)
T 3hyw_A 203 KRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECC
T ss_pred HHHHHHHHHhCCeEEEeCceEEEEeCCceEEEeeCCCceEeecceEEEeccCCCc
Confidence 344667788899999999 688999988887777776678999999999998874
No 440
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=93.53 E-value=0.076 Score=61.56 Aligned_cols=53 Identities=11% Similarity=0.083 Sum_probs=40.1
Q ss_pred hhhHHHHhhhCCeEEEee-eEEEecCCeEEEEe--CCCC---eeEEEcCeEEEccCCCC
Q psy14927 845 TGGIAHLFKSNKVTQLNG-HGKITGPNTVTVIK--SDGS---TEEVKTKNILIATGSEV 897 (1074)
Q Consensus 845 ~~~~~~~l~~~gV~~~~g-~v~~id~~~~~v~~--~~G~---~~~i~~d~lIIATG~~p 897 (1074)
...+.+.+++.||+++.+ .++.++++.+.+.. .+|. ..++.+|.+++++|..+
T Consensus 211 ~~~~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~ 269 (437)
T 3sx6_A 211 KGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKG 269 (437)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEEC
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcC
Confidence 344667788899999999 58888888766543 3432 36799999999999765
No 441
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=93.43 E-value=0.017 Score=68.44 Aligned_cols=52 Identities=19% Similarity=0.271 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccC
Q psy14927 948 GEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVG 1007 (1074)
Q Consensus 948 ~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G 1007 (1074)
..+.+.+.+.+.+.|+++++++.|++|..+++. +++.+ +.++.+|.||.++.
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~------G~~~~ad~vI~t~P 273 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQD------GTTIGYKKLVSTMA 273 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETT------SCEEEEEEEEECSC
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcC------CCEEECCEEEECCC
Confidence 345666677788889999999999999986654 44444 46899999998765
No 442
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=93.42 E-value=0.049 Score=48.66 Aligned_cols=88 Identities=16% Similarity=0.167 Sum_probs=52.1
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhH
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRV 85 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~ 85 (1074)
+...|++++|+..|+++-..+ ++++..+..+|..+...|++++|.++|.++-....
T Consensus 14 ~~~~~~~~~A~~~~~~al~~~--------------------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p---- 69 (111)
T 2l6j_A 14 LFKQGLYREAVHCYDQLITAQ--------------------PQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTS---- 69 (111)
T ss_dssp HHTTTCHHHHHHHHHHHHHHC--------------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCS----
T ss_pred HHHcCCHHHHHHHHHHHHhcC--------------------CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC----
Confidence 345667777777776665222 33466677777777777777777777766544311
Q ss_pred hhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHH
Q psy14927 86 LCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFY 128 (1074)
Q Consensus 86 l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y 128 (1074)
..+++.. -..+.+.+|..+...|+++.|++.|
T Consensus 70 --~~~~~~~---------~~~~~~~~~~~~~~~~~~~~a~~~~ 101 (111)
T 2l6j_A 70 --TAEHVAI---------RSKLQYRLELAQGAVGSVQIPVVEV 101 (111)
T ss_dssp --STTSHHH---------HHHHHHHHHHHHHHHHCCCCCSSSS
T ss_pred --CccHHHH---------HHHHHHHHHHHHHHHHhHhhhHhHH
Confidence 0001100 0345667788888887777666543
No 443
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=93.41 E-value=0.54 Score=41.60 Aligned_cols=81 Identities=21% Similarity=0.090 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHhh-----CH---HHHHHHHHHcCCHHHHHHHHH----hcC-CcHHHHHHHHHHHh
Q psy14927 625 VLLKWWAQYIESTEDMDLAMKYYEEAR-----DY---LSMVRVLCFLQDFSRAAELAN----ASG-DTAAAYHLARQYEN 691 (1074)
Q Consensus 625 ~l~~~~a~~~e~~~~~~~A~~~y~~ag-----~~---~~ai~~~~~~~~~~~a~~v~~----~~~-~~~~~~~~A~~~~~ 691 (1074)
..+...|......|+|++|+.+|.++- ++ -....+|...++|++|....+ ..+ .......+|..+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 84 (118)
T 1elw_A 5 NELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEF 84 (118)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 456667777778888888888888872 22 233445777888888887663 222 23333477888888
Q ss_pred cCCHHHHHHHHHHc
Q psy14927 692 SGQFDEAIHFYSVA 705 (1074)
Q Consensus 692 ~g~~~~A~~~~~ka 705 (1074)
.|++++|.++|.++
T Consensus 85 ~~~~~~A~~~~~~~ 98 (118)
T 1elw_A 85 LNRFEEAKRTYEEG 98 (118)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHH
Confidence 88888888877655
No 444
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=93.39 E-value=0.26 Score=57.50 Aligned_cols=65 Identities=20% Similarity=0.331 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhCCCE--EEeCceEEEEEecCC--eEEEEEeeccCCCCceEEEcCEEEEccC--CcccCC
Q psy14927 948 GEVAKQFQRILGKQGMQ--FKLGTKVTGASKSGD--NITVTIENVKDPTKKEELSCDALLVCVG--RRPYTH 1013 (1074)
Q Consensus 948 ~~~~~~~~~~l~~~gV~--i~~~~~v~~i~~~~~--~~~v~~~~~~~~g~~~~i~~D~vi~a~G--~~p~~~ 1013 (1074)
..+.+.+.+.+++.|+. +++++.|..+...++ ...|++.+.. +|+..++.+|.||+|+| ..|+..
T Consensus 101 ~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~-~g~~~~~~~d~VVvAtG~~s~p~~p 171 (464)
T 2xve_A 101 EVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHT-TDTIYSEEFDYVVCCTGHFSTPYVP 171 (464)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETT-TTEEEEEEESEEEECCCSSSSBCCC
T ss_pred HHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcC-CCceEEEEcCEEEECCCCCCCCccC
Confidence 34556677777888998 999999999987655 5567666522 23346799999999999 677654
No 445
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=93.38 E-value=0.092 Score=48.66 Aligned_cols=30 Identities=13% Similarity=-0.078 Sum_probs=25.9
Q ss_pred hcCChHHHHHHHHHHHhcCChHHHHHHHHH
Q psy14927 101 ASGDTAAAYHLARQYENSGQFDEAIHFYSV 130 (1074)
Q Consensus 101 ~~~~~~~~~~la~~~~~~g~~~~Ai~~y~~ 130 (1074)
.+.+..+.+.+|..+...|++++|++.|.+
T Consensus 47 ~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~ 76 (121)
T 1hxi_A 47 EPEREEAWRSLGLTQAENEKDGLAIIALNH 76 (121)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 456788899999999999999999988654
No 446
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=93.23 E-value=0.15 Score=56.83 Aligned_cols=86 Identities=21% Similarity=0.197 Sum_probs=67.8
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhhC-------------------------hhhhhhHhhccCCHHHHHHHHHh---
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEARD-------------------------YLSMVRVLCFLQDFSRAAELANA--- 101 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~d-------------------------~~~~vr~l~~~~~~~~a~~i~~~--- 101 (1074)
...+...|..+...|+|++|..+|.++=. +.++..+|..+|++++|.+.++.
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 44577789999999999999999998643 23556668889999999887763
Q ss_pred --cCChHHHHHHHHHHHhcCChHHHHHHHHHhCChH
Q psy14927 102 --SGDTAAAYHLARQYENSGQFDEAIHFYSVAGSCG 135 (1074)
Q Consensus 102 --~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a~~~~ 135 (1074)
+.+..+.+.+|..|...|++++|++.|.++-..+
T Consensus 259 ~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~ 294 (338)
T 2if4_A 259 EEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYA 294 (338)
T ss_dssp HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC--
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 4677888899999999999999999988876554
No 447
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=93.18 E-value=0.14 Score=57.86 Aligned_cols=118 Identities=13% Similarity=0.020 Sum_probs=82.3
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh-----
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY----- 79 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~----- 79 (1074)
.+...|++++|+..|+++-......+. ...+..... .......++..+|..+...|+|++|.++|.++=..
T Consensus 232 ~~~~~g~~~~Ai~~y~kAl~~~~~~~~--~~~~~~~~~--~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~ 307 (370)
T 1ihg_A 232 TFFKSQNWEMAIKKYTKVLRYVEGSRA--AAEDADGAK--LQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNT 307 (370)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHH--HSCHHHHGG--GHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHhcCHHHHHHHHHHHHHHhhcCcc--ccChHHHHH--HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhH
Confidence 456789999999999988743212110 001111110 11234668888999999999999999999987543
Q ss_pred ---hhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChHHHHH
Q psy14927 80 ---LSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFDEAIH 126 (1074)
Q Consensus 80 ---~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~~Ai~ 126 (1074)
..+..+|..+|++++|.+..+. +.+......++..+...++.+++.+
T Consensus 308 ~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 308 KALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455668899999999887663 4677788889988888888877654
No 448
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.18 E-value=0.33 Score=56.32 Aligned_cols=64 Identities=22% Similarity=0.212 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCC-ceEEEcCEEEEccCC--cccCC
Q psy14927 949 EVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTK-KEELSCDALLVCVGR--RPYTH 1013 (1074)
Q Consensus 949 ~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~-~~~i~~D~vi~a~G~--~p~~~ 1013 (1074)
.+.+.+.+..++.++.++++++|+.+...++...|++.+.. +|+ ..++.+|.||+|+|. .|+..
T Consensus 116 ~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~-~G~~~~~~~~d~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 116 TIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTK-AGSPISKDIFDAVSICNGHYEVPYIP 182 (447)
T ss_dssp HHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESS-TTCCEEEEEESEEEECCCSSSSBCBC
T ss_pred HHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecC-CCCeeEEEEeCEEEECCCCCCCCCCC
Confidence 45566667777778889999999999987777777776521 233 347999999999998 66553
No 449
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=93.16 E-value=0.6 Score=42.12 Aligned_cols=82 Identities=16% Similarity=0.188 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHhh-----C---HHHHHHHHHHcCCHHHHHHHHH----hc-CCcHHHHHHHHHHH
Q psy14927 624 RVLLKWWAQYIESTEDMDLAMKYYEEAR-----D---YLSMVRVLCFLQDFSRAAELAN----AS-GDTAAAYHLARQYE 690 (1074)
Q Consensus 624 ~~l~~~~a~~~e~~~~~~~A~~~y~~ag-----~---~~~ai~~~~~~~~~~~a~~v~~----~~-~~~~~~~~~A~~~~ 690 (1074)
+..+...|......|+|++|+.+|.++- + +-....+|...+++++|.+..+ .. ........+|..+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALS 91 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHH
Confidence 3566677777888889999998888762 2 2233455778888888887663 22 22333347788888
Q ss_pred hcCCHHHHHHHHHHc
Q psy14927 691 NSGQFDEAIHFYSVA 705 (1074)
Q Consensus 691 ~~g~~~~A~~~~~ka 705 (1074)
..|++++|..+|.++
T Consensus 92 ~~~~~~~A~~~~~~~ 106 (131)
T 2vyi_A 92 SLNKHVEAVAYYKKA 106 (131)
T ss_dssp HTTCHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHH
Confidence 888888887777654
No 450
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=93.14 E-value=0.36 Score=52.00 Aligned_cols=66 Identities=15% Similarity=-0.096 Sum_probs=52.0
Q ss_pred CChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHH
Q psy14927 48 KDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHF 127 (1074)
Q Consensus 48 ~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~ 127 (1074)
.+...+...|..+...|++++|..+|.++=.. .+.+..+.+.+|..|.+.|++++|++.
T Consensus 2 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~---------------------~p~~~~~~~~la~~~~~~~~~~~A~~~ 60 (281)
T 2c2l_A 2 PSAQELKEQGNRLFVGRKYPEAAACYGRAITR---------------------NPLVAVYYTNRALCYLKMQQPEQALAD 60 (281)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------------CSCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------------------CCccHHHHHHHHHHHHHhcCHHHHHHH
Confidence 34567778888888999999999988765332 334667788999999999999999998
Q ss_pred HHHhCCh
Q psy14927 128 YSVAGSC 134 (1074)
Q Consensus 128 y~~a~~~ 134 (1074)
|.++-..
T Consensus 61 ~~~al~~ 67 (281)
T 2c2l_A 61 CRRALEL 67 (281)
T ss_dssp HHHHTTS
T ss_pred HHHHHHh
Confidence 8776543
No 451
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=93.09 E-value=0.25 Score=45.23 Aligned_cols=56 Identities=16% Similarity=0.063 Sum_probs=37.8
Q ss_pred HHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCCh---HHHHHHHHHHHhcCChHHHHHHHHH
Q psy14927 54 KWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDT---AAAYHLARQYENSGQFDEAIHFYSV 130 (1074)
Q Consensus 54 ~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~---~~~~~la~~~~~~g~~~~Ai~~y~~ 130 (1074)
-..|..+...|++++|.++|.++-.. .+.+. .+.+.+|..+...|++++|+++|.+
T Consensus 6 ~~~a~~~~~~~~~~~A~~~~~~~~~~---------------------~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~ 64 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQLFLSFLEL---------------------YPNGVYTPNALYWLGESYYATRNFQLAEAQFRD 64 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH---------------------CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHH---------------------CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 34456666666666666666543211 12333 5788999999999999999998765
No 452
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=92.87 E-value=0.22 Score=57.95 Aligned_cols=118 Identities=11% Similarity=0.056 Sum_probs=80.3
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhC------
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARD------ 78 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d------ 78 (1074)
.+...|++++|+..|+++-.....-+...-+.+..+..+ ...++..+|..+...|+|++|+.+|.++=.
T Consensus 277 ~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~-----~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~ 351 (457)
T 1kt0_A 277 VYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESF-----LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANE 351 (457)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHH-----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHH-----HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccH
Confidence 356788999999999987643322111000011111111 146788889999999999999999998633
Q ss_pred --hhhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChHHHHHH
Q psy14927 79 --YLSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFDEAIHF 127 (1074)
Q Consensus 79 --~~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~~Ai~~ 127 (1074)
+.....+|..+|++++|....+. +.+..+...++..+...|++++|.+-
T Consensus 352 ~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 352 KGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556668999999999887763 45667788999999999998887653
No 453
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=92.76 E-value=0.34 Score=55.36 Aligned_cols=59 Identities=14% Similarity=0.276 Sum_probs=46.5
Q ss_pred CCHHHHHHHHHHHHhCCCEEEeCceEEEEEec----CCeEEEEEeeccCCCCceEEEcCEEEEccCCccc
Q psy14927 946 IDGEVAKQFQRILGKQGMQFKLGTKVTGASKS----GDNITVTIENVKDPTKKEELSCDALLVCVGRRPY 1011 (1074)
Q Consensus 946 ~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~----~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~ 1011 (1074)
....+.+.+.+.+++.||++++++.++++..+ ++++.|++.+ + ++.+|.||+|+|..|.
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~------g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNS------T-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETT------E-EEEESEEEECCCCSSC
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECC------C-EEECCEEEECCCCccC
Confidence 45677788888999999999999999999865 4445554322 2 7999999999998874
No 454
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=92.73 E-value=0.55 Score=42.50 Aligned_cols=81 Identities=22% Similarity=0.359 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHhh-----C---HHHHHHHHHHcCCHHHHHHHHHh-----cC--C-----cHHHHH
Q psy14927 625 VLLKWWAQYIESTEDMDLAMKYYEEAR-----D---YLSMVRVLCFLQDFSRAAELANA-----SG--D-----TAAAYH 684 (1074)
Q Consensus 625 ~l~~~~a~~~e~~~~~~~A~~~y~~ag-----~---~~~ai~~~~~~~~~~~a~~v~~~-----~~--~-----~~~~~~ 684 (1074)
..+...|......|+|++|+.+|.++= + +-....+|...++|++|....+. .. + ......
T Consensus 5 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (131)
T 1elr_A 5 LKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYAR 84 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHH
Confidence 456667777778888888888888762 2 22344557778888888866631 11 1 223337
Q ss_pred HHHHHHhcCCHHHHHHHHHHc
Q psy14927 685 LARQYENSGQFDEAIHFYSVA 705 (1074)
Q Consensus 685 ~A~~~~~~g~~~~A~~~~~ka 705 (1074)
+|..+...|++++|.++|.++
T Consensus 85 la~~~~~~~~~~~A~~~~~~~ 105 (131)
T 1elr_A 85 IGNSYFKEEKYKDAIHFYNKS 105 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHH
Confidence 788888888888888887654
No 455
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=92.44 E-value=0.36 Score=42.68 Aligned_cols=51 Identities=18% Similarity=0.248 Sum_probs=41.1
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHh
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEA 76 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a 76 (1074)
+...|++++|+..|+++-..+ ++++..|..+|..+...|++++|.++|.++
T Consensus 17 ~~~~g~~~~A~~~~~~al~~~--------------------p~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 67 (100)
T 3ma5_A 17 HLKHDNASRALALFEELVETD--------------------PDYVGTYYHLGKLYERLDRTDDAIDTYAQG 67 (100)
T ss_dssp HHHTTCHHHHHHHHHHHHHHS--------------------TTCTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhC--------------------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 456788888888888776333 455778999999999999999999999874
No 456
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=92.38 E-value=1.8 Score=48.87 Aligned_cols=145 Identities=11% Similarity=0.131 Sum_probs=97.9
Q ss_pred HHHHHHhhhhHHHH-HHHH-HHHHhhhc--HHHHHHHHHHhhCHHHHHHHHHHcCCHHHHHHHHHhcCCcH------HHH
Q psy14927 614 KQIILILIIYRVLL-KWWA-QYIESTED--MDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTA------AAY 683 (1074)
Q Consensus 614 ~~~~~~~~~~~~l~-~~~a-~~~e~~~~--~~~A~~~y~~ag~~~~ai~~~~~~~~~~~a~~v~~~~~~~~------~~~ 683 (1074)
=|+.|+....|+++ ..-- .|...+.. .-...-+.+-+++|+..|.-. .+++|++++-++=...+.+ ...
T Consensus 174 dAllLA~~gg~el~~~~vq~~Y~~k~~~~~~~~rll~~iv~~n~~d~V~~~-~l~~WkE~La~i~t~a~~e~~ef~~Lc~ 252 (399)
T 2pm7_A 174 EAMVIALDSNNERLKESVKNAYFAKYGSKSSLSRILYSISKREVDDLVENL-DVSQWKFISKAIQNLYPNDIAQRNEMMI 252 (399)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHTTCCHHHHHHB-CGGGHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHhcccCchHHHHHHHHHccCHHHHHhcC-ChhhHHHHHHHHHhcCCccHhHHHHHHH
Confidence 34446656677777 4333 35555542 444556788889999988864 6999999998884333322 223
Q ss_pred HHHHHHHhcCCHHHHHHHHHHcCCHHHHHHH-hccHH-------------------HHHHHHHHh-------------CC
Q psy14927 684 HLARQYENSGQFDEAIHFYSVAGSCGNAVRL-CGQLD-------------------AVESIASEL-------------NV 730 (1074)
Q Consensus 684 ~~A~~~~~~g~~~~A~~~~~kag~~~~Av~m-a~~w~-------------------~a~~~A~~~-------------~~ 730 (1074)
.+|+-|+..|+.+.|.=||+-||++++.+.+ .+... ....+.|+. ..
T Consensus 253 ~LG~RL~~~g~~~~A~lCYi~Ag~~dk~v~iW~~~~~~~~~~~~~~~~s~~~~~~~~Lqe~iEkv~vl~~a~~~~~~~~~ 332 (399)
T 2pm7_A 253 KLGDRMKENGHRQDSLTLYLAAGSLDKVASIWLSEFPDLEDKLKKDNKTIYEAHSECMTEFIERFTVFSNFINGSSTINN 332 (399)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHSHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSCC---CCC
T ss_pred HHHHHHHhCCChhhhhHHHHhhCCHHHHHHHHHHhcchhhhccccccCCcccccHHHHHHHHHHHHHHHHHHhcCCCcCc
Confidence 8899999999999999999999999999998 22111 222333321 01
Q ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy14927 731 QSDQDLILKCASYFARREHHDRAVQMYAI 759 (1074)
Q Consensus 731 ~~~~~~~~~~a~~~~~~~~~~~Ai~~y~~ 759 (1074)
+.....+..+|.-|...|+.+.|.++...
T Consensus 333 ~~l~~~~~eYA~lLA~qG~l~~A~~yL~~ 361 (399)
T 2pm7_A 333 EQLIAKFLEFINLTTSTGNFELATEFLNS 361 (399)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHh
Confidence 12336677888888888888888777765
No 457
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=92.06 E-value=0.048 Score=64.05 Aligned_cols=76 Identities=20% Similarity=0.174 Sum_probs=60.5
Q ss_pred HHHHHHhccCHHHHHHHHHHhhC--------hhhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChH
Q psy14927 56 WAQYIESTEDMDLAMKYYEEARD--------YLSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFD 122 (1074)
Q Consensus 56 ~a~~~e~~~~~~~A~~~y~~a~d--------~~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~ 122 (1074)
.|..+...|++++|.++|.++=. +.++..++..+|++++|.+..+. +.+..+.+.+|..|..+|+++
T Consensus 12 lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~ 91 (477)
T 1wao_1 12 QANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFR 91 (477)
T ss_dssp SSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH
Confidence 35566678999999999998633 24566678889999999887763 467778889999999999999
Q ss_pred HHHHHHHHh
Q psy14927 123 EAIHFYSVA 131 (1074)
Q Consensus 123 ~Ai~~y~~a 131 (1074)
+|+++|.++
T Consensus 92 eA~~~~~~a 100 (477)
T 1wao_1 92 AALRDYETV 100 (477)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987654
No 458
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=92.03 E-value=1 Score=43.91 Aligned_cols=80 Identities=21% Similarity=0.098 Sum_probs=53.3
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHh-----h---------------CHHHHHHHHHHcCCHHHHHHHHH----h------
Q psy14927 626 LLKWWAQYIESTEDMDLAMKYYEEA-----R---------------DYLSMVRVLCFLQDFSRAAELAN----A------ 675 (1074)
Q Consensus 626 l~~~~a~~~e~~~~~~~A~~~y~~a-----g---------------~~~~ai~~~~~~~~~~~a~~v~~----~------ 675 (1074)
.+...|.-+...|+|++|+..|.+| . -|-+.-.++..+++|++|+..+. -
T Consensus 13 ~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e 92 (159)
T 2hr2_A 13 LALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGE 92 (159)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcccc
Confidence 4445566666677777777777766 2 33445556777777777776552 1
Q ss_pred -cCC-cHHH----HHHHHHHHhcCCHHHHHHHHHHc
Q psy14927 676 -SGD-TAAA----YHLARQYENSGQFDEAIHFYSVA 705 (1074)
Q Consensus 676 -~~~-~~~~----~~~A~~~~~~g~~~~A~~~~~ka 705 (1074)
.++ ...- ...|..|...|++++|+.+|-++
T Consensus 93 ~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kA 128 (159)
T 2hr2_A 93 LNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKV 128 (159)
T ss_dssp TTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHH
Confidence 222 2333 47789999999999999988766
No 459
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=91.98 E-value=11 Score=43.94 Aligned_cols=64 Identities=8% Similarity=-0.027 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCCHHHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhc
Q psy14927 233 KEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKAPHLLANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLLKH 306 (1074)
Q Consensus 233 ~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~ 306 (1074)
++++..-++|+... ++..++-.+|.++- +...+...-++.| ..+||-..+..++..+...+...
T Consensus 354 ~~~~~~yid~e~~~------~~~~~aR~l~er~~---k~~~lw~~~~~fE-~~~G~~~~~r~v~~~~~~~~~~~ 417 (493)
T 2uy1_A 354 TLLKEEFFLFLLRI------GDEENARALFKRLE---KTSRMWDSMIEYE-FMVGSMELFRELVDQKMDAIKAD 417 (493)
T ss_dssp HHHHHHHHHHHHHH------TCHHHHHHHHHHSC---CBHHHHHHHHHHH-HHHSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHc------CCHHHHHHHHHHHH---HHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHhccc
Confidence 45555555555443 22233334444442 1356677778889 99999999999999999999854
No 460
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=91.92 E-value=0.031 Score=62.80 Aligned_cols=38 Identities=11% Similarity=0.038 Sum_probs=30.3
Q ss_pred CCCCCC-CCCCEEEecccCCCCCcHHHHHHHHHHHHHHhh
Q psy14927 1033 NSRFQT-VIPNIFAIGDCIHGPMLAHKAEDEGIVCVEGIA 1071 (1074)
Q Consensus 1033 d~~~~t-s~~~IyAiGD~~~~~~~~~~A~~~G~~aA~~I~ 1071 (1074)
+.+++| .++|+|.+|+.++.. --..|..+|.+|+.|++
T Consensus 320 ~~tle~k~~~~Lf~AGqi~G~~-Gy~eAaa~Gl~AG~naa 358 (443)
T 3g5s_A 320 GETLEFREAEGLYAAGVLAGVE-GYLESAATGFLAGLNAA 358 (443)
T ss_dssp CTTSEETTEEEEEECGGGGTBC-SHHHHHHHHHHHHHHHH
T ss_pred ChhceecCCCCEEECccccccH-HHHHHHHhHHHHHHHHH
Confidence 367887 699999999998863 35578888888888765
No 461
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=91.90 E-value=0.75 Score=53.96 Aligned_cols=53 Identities=19% Similarity=0.167 Sum_probs=39.8
Q ss_pred hhhhhhHHHHhhhCCeEEEee-eEEEec--CCeEE-EEeCCCCeeEEEcCeEEEccCCC
Q psy14927 842 KALTGGIAHLFKSNKVTQLNG-HGKITG--PNTVT-VIKSDGSTEEVKTKNILIATGSE 896 (1074)
Q Consensus 842 ~~l~~~~~~~l~~~gV~~~~g-~v~~id--~~~~~-v~~~~G~~~~i~~d~lIIATG~~ 896 (1074)
..+...+.+.+++.|++++++ .|+.|. .+.++ |++++| +++.+|.||.+++..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g--~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDG--RRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTS--CEEECSCEEECCC--
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCC--cEEEcCEEEECCCHH
Confidence 455566778888899999999 577764 34443 778888 789999999998764
No 462
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=91.88 E-value=0.26 Score=54.73 Aligned_cols=121 Identities=12% Similarity=0.084 Sum_probs=64.4
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhH-hhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHh-----hC
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRM-LLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEA-----RD 78 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a-----~d 78 (1074)
.+...|++++|+..|+++-.....-+.. ..+++......+. ..++..+|..+...|+|++|+++|.++ .+
T Consensus 188 ~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~----~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~ 263 (338)
T 2if4_A 188 SLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVK----NPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKN 263 (338)
T ss_dssp HTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHH----THHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTC
T ss_pred HHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 3457899999999999987544222211 1122222222221 248889999999999999999999986 22
Q ss_pred ---hhhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHH-hcCChHHHHHHHH
Q psy14927 79 ---YLSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYE-NSGQFDEAIHFYS 129 (1074)
Q Consensus 79 ---~~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~-~~g~~~~Ai~~y~ 129 (1074)
+..+..+|..+|++++|.+..+. +.+..+...+++... ..+..+.+.++|.
T Consensus 264 ~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~ 323 (338)
T 2if4_A 264 PKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYK 323 (338)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24555668999999999988774 345556666666644 3345555555543
No 463
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=91.64 E-value=0.007 Score=68.78 Aligned_cols=217 Identities=16% Similarity=0.171 Sum_probs=140.9
Q ss_pred HHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHH
Q psy14927 37 TDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYE 116 (1074)
Q Consensus 37 ~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~ 116 (1074)
...+++++..++...+ ...|+=+-..|.|+.|--+|..-.+|-.+.-+|.++|+++.|++-+|+.++.-..+.+-.-|.
T Consensus 132 L~elEefl~~~N~A~i-q~VGDrcf~e~lYeAAKilys~isN~akLAstLV~L~~yq~AVdaArKAns~ktWKeV~~ACv 210 (624)
T 3lvg_A 132 LAELEEFINGPNNAHI-QQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACV 210 (624)
T ss_dssp SSTTTSTTSCCSSSCT-HHHHHHHHHSCCSTTSSTTGGGSCCCTTTSSSSSSCSGGGSSTTTTTTCCSSCSHHHHTHHHH
T ss_pred HHHHHHHHcCCCcccH-HHHHHHHHHccCHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHh
Confidence 3445555555444333 456888889999999999999999998888889999999999999999988877777666666
Q ss_pred hcCCh-----------------HHHHHHHHHhCChHHHHHHHHHh-C----chHHHHHHh---hhcCchhHHHHHHHH--
Q psy14927 117 NSGQF-----------------DEAIHFYSVAGSCGNAVRLCKEQ-A----LDDQLWNLA---LSAGPSEQIEAATYL-- 169 (1074)
Q Consensus 117 ~~g~~-----------------~~Ai~~y~~a~~~~~A~~la~~~-~----~~~~~~~l~---~~~~~~~~~~~A~~~-- 169 (1074)
..+++ ++-|++|..-|.|+|-|.|-+.- | -|.-+..|+ ....|+-+-+.=..|
T Consensus 211 d~~EfrLAqicGLniIvhadeL~elv~~YE~~G~f~ELIsLlEaglglErAHmGmFTELaILYsKY~PeKlmEHlklf~s 290 (624)
T 3lvg_A 211 DGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWS 290 (624)
T ss_dssp HSCTTTTTTHHHHHHHCCSSCCSGGGSSSSTTCCCTTSTTTHHHHTTSTTCCHHHHHHHHHHHHSSCTTHHHHHHTTSSS
T ss_pred CchHHHHHHHhcchhcccHHHHHHHHHHHHhCCCHHHHHHHHHHHhCCCchhHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 65554 66678888888888877665531 1 233333332 334443333222222
Q ss_pred -----------ccCC-hhHHHHHHHHhCChHHHHHHHHhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHH
Q psy14927 170 -----------ETIE-PDKAVLLYHKAGALHKALDLAFKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYV 237 (1074)
Q Consensus 170 -----------e~~~-~~~A~~ly~kaG~~~kAl~l~~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~ 237 (1074)
|+.. +.+++-||.+=..+..|+...+..+.. .=|.+...++.....+-|||.
T Consensus 291 riNipKviracE~ahLW~ElvfLY~~ydE~DnA~ltMi~h~~~----------------Aw~h~~Fkdii~KVaN~EiyY 354 (624)
T 3lvg_A 291 RVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTD----------------AWKEGQFKDIITKVANVELYY 354 (624)
T ss_dssp SSCCTTTHHHHTTTTCHHHHHHHHHHHTCHHHHHHTTTSCHHH----------------HCCGGGGTTTGGGCSCSHHHH
T ss_pred hccHHHHHHHHHHHhhHHHHHHHHhcchhHHHHHHHHHhCChh----------------hccHHHHHHHHHHcchHHHHH
Confidence 2322 577788888888888887666553200 012233455666777889999
Q ss_pred HHHHHHhcCCCCCChhH---------HHHHHHHHHccCCHHH
Q psy14927 238 MAANYLQSSDWKSQPEL---------LKSIISFYSKGKAPHL 270 (1074)
Q Consensus 238 ~aa~yl~~~~~~~~~~~---------~~~i~~~Y~k~~~~~~ 270 (1074)
+|.+|....-..--.+. ..+++++++|.++..-
T Consensus 355 KAi~FYL~e~P~lL~DLL~vL~prlDh~RvV~~~~k~~~LpL 396 (624)
T 3lvg_A 355 RAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFSKVKQLPL 396 (624)
T ss_dssp HHHHHHTTSCCTTSHHHHHHHCTTCCSTTTHHHHHTTTCGGG
T ss_pred HHHHHHHHhChHHHHHHHHhccccCChHHHHHHHHhcCCchh
Confidence 99999876522111111 1244777777776543
No 464
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=91.59 E-value=0.38 Score=40.80 Aligned_cols=62 Identities=27% Similarity=0.446 Sum_probs=48.5
Q ss_pred ChHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHH
Q psy14927 49 DPVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFY 128 (1074)
Q Consensus 49 ~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y 128 (1074)
++..+..+|..+...|++++|.++|.++=.. .+.+....+.+|..+...|++++|+++|
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~---------------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 66 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL---------------------DPNNAEAWYNLGNAYYKQGDYDEAIEYY 66 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------------CTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhc---------------------CCCCHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 3567778899999999999999998765432 2335567788999999999999999887
Q ss_pred HHh
Q psy14927 129 SVA 131 (1074)
Q Consensus 129 ~~a 131 (1074)
.++
T Consensus 67 ~~a 69 (91)
T 1na3_A 67 QKA 69 (91)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 465
>3mzk_B Protein transport protein SEC16; alpha-helical-stack, beta-propeller; 2.69A {Saccharomyces cerevisiae}
Probab=91.56 E-value=3.2 Score=47.39 Aligned_cols=122 Identities=7% Similarity=0.093 Sum_probs=87.5
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHcCCHHHHHHHHHhcCCcHHHHHHHHHHHhcCCH----------HHHHHHHHHcCCHHH
Q psy14927 641 DLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQF----------DEAIHFYSVAGSCGN 710 (1074)
Q Consensus 641 ~~A~~~y~~ag~~~~ai~~~~~~~~~~~a~~v~~~~~~~~~~~~~A~~~~~~g~~----------~~A~~~~~kag~~~~ 710 (1074)
.+-+.-++..|+.++|+++....++|-.|+=++...++..-...+-+|+.+.-.. -...=+-+-+|+..+
T Consensus 154 ~~~I~~~Ll~G~~e~Av~~al~~~lwa~ALlLAs~~g~e~~~~V~~~y~~~~~~~~~~~~~~~~~~Lr~Ly~v~sGn~~~ 233 (441)
T 3mzk_B 154 QMRVLAFLQTGNHDEALRLALSKRDYAIALLVGSLMGKDRWSEVIQKYLYEGFTAGPNDQKELAHFLLLIFQVFVGNSKM 233 (441)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHCC------CTHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHhCCcHHHHHHHHHhcCHHHHHHHHHHHHHhhcccCCccccccccHHHHHHHHHcCCHHH
Confidence 4456678889999999999999999999999996665544444555555532111 122445567899999
Q ss_pred HHHH-----------hccHHHHHHHHHHhCCccc----------HHHHHHHHHHHHHcCCHHHHHHHHHHhCC
Q psy14927 711 AVRL-----------CGQLDAVESIASELNVQSD----------QDLILKCASYFARREHHDRAVQMYAIARR 762 (1074)
Q Consensus 711 Av~m-----------a~~w~~a~~~A~~~~~~~~----------~~~~~~~a~~~~~~~~~~~Ai~~y~~ag~ 762 (1074)
+|.- ..+|.+...+.=.+.+... .+.+..+|..|...|+.+.|.-||.-++.
T Consensus 234 ~V~~l~~~~~~~~~~l~~Wre~lA~IlsN~~~~~~~~~~~p~~~~~~l~~LGd~L~~~g~~~aAhiCYL~a~~ 306 (441)
T 3mzk_B 234 AIKSFYTNNETSQWASENWKSIVAAVLINIPENNEDPLLIPPVVLEFLIEFGIFLTKKGLTAAASTLFIIGNV 306 (441)
T ss_dssp HHHHHHHCHHHHHHHHHSHHHHHHHHHHTSCCCSSCTTCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHHHhccCCccccchHhHHHHHHHHHHhCCCCchhhcccccchHHHHHHHHHHHHHhCCCcchhHHhHhccCC
Confidence 9873 3589988776655543322 47889999999999998888888876665
No 466
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=91.49 E-value=0.47 Score=41.64 Aligned_cols=53 Identities=11% Similarity=0.171 Sum_probs=41.9
Q ss_pred hhhhhhHhhccCCHHHHHHHHHh-----cCChHHHHHHHHHHHhcCChHHHHHHHHHh
Q psy14927 79 YLSMVRVLCFLQDFSRAAELANA-----SGDTAAAYHLARQYENSGQFDEAIHFYSVA 131 (1074)
Q Consensus 79 ~~~~vr~l~~~~~~~~a~~i~~~-----~~~~~~~~~la~~~~~~g~~~~Ai~~y~~a 131 (1074)
+..+..++...|++++|....+. +.+..+.+.+|..|...|++++|+++|.++
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 66 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYV 66 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 34566778888999998887652 456778889999999999999999887653
No 467
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=91.49 E-value=0.94 Score=44.21 Aligned_cols=83 Identities=12% Similarity=0.152 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHHHhhhcHHHHHHHHHHhh-----CH---HHHHHH-HHHcCCH--HHHHHHHH----hc-CCcHHHHHHH
Q psy14927 623 YRVLLKWWAQYIESTEDMDLAMKYYEEAR-----DY---LSMVRV-LCFLQDF--SRAAELAN----AS-GDTAAAYHLA 686 (1074)
Q Consensus 623 ~~~l~~~~a~~~e~~~~~~~A~~~y~~ag-----~~---~~ai~~-~~~~~~~--~~a~~v~~----~~-~~~~~~~~~A 686 (1074)
++..+...|......|+|++|+.+|.++= ++ -....+ |...+++ ++|....+ .. +.......+|
T Consensus 43 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 122 (177)
T 2e2e_A 43 NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLA 122 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 34588888999999999999999998872 22 233344 6678887 88887763 22 3334444889
Q ss_pred HHHHhcCCHHHHHHHHHHc
Q psy14927 687 RQYENSGQFDEAIHFYSVA 705 (1074)
Q Consensus 687 ~~~~~~g~~~~A~~~~~ka 705 (1074)
..+...|++++|+.+|.++
T Consensus 123 ~~~~~~g~~~~A~~~~~~a 141 (177)
T 2e2e_A 123 SDAFMQANYAQAIELWQKV 141 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHH
Confidence 9999999999999888765
No 468
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=91.14 E-value=0.15 Score=65.65 Aligned_cols=86 Identities=15% Similarity=0.032 Sum_probs=51.1
Q ss_pred hhhhhccccchHHHHHHHhh------hhhhhccccccccchhhhhhhhhHHHhhhhhhHHHHhhhCCeEEEee-eEEEec
Q psy14927 796 VVLNTLGNCAAVQANYHLAT------KLFTQAGDKGVKLNLETMMGTKSAAVKALTGGIAHLFKSNKVTQLNG-HGKITG 868 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~------~l~e~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~gV~~~~g-~v~~id 868 (1074)
+|||||||..|+.+|..+.+ ++++..+. ...+... . ....++..||+|+.+ .++.+.
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~--------~~~~~~~---~-----e~~~~~~~Gv~~~~~~~~~~i~ 397 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF--------VNIRAVP---E-----EVELAKEEKCEFLPFLSPRKVI 397 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG--------GGCCSCH---H-----HHHHHHHTTCEEECSEEEEEEE
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh--------hhCCCCH---H-----HHHHHHHcCCEEEeCCCceEEE
Confidence 59999999999999999887 22222110 0111111 1 113456679999887 344443
Q ss_pred --CCeEE-EEeC------C-------CCeeEEEcCeEEEccCCCC
Q psy14927 869 --PNTVT-VIKS------D-------GSTEEVKTKNILIATGSEV 897 (1074)
Q Consensus 869 --~~~~~-v~~~------~-------G~~~~i~~d~lIIATG~~p 897 (1074)
...++ |.+. + |+..++.+|.||+|+|..|
T Consensus 398 ~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~ 442 (1025)
T 1gte_A 398 VKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVL 442 (1025)
T ss_dssp EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEEC
T ss_pred ccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCC
Confidence 22221 2221 2 2234799999999999975
No 469
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=91.04 E-value=0.58 Score=52.74 Aligned_cols=54 Identities=13% Similarity=0.203 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCcc
Q psy14927 948 GEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRP 1010 (1074)
Q Consensus 948 ~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p 1010 (1074)
..+...+.+.+.+.||+++.+++|++++. ++ .|++.+ +.++.+|.||.|+|..+
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~-~v~~~~------g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP--VG-RLTLQT------GEVLEADLIVGADGVGS 160 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET--TT-EEEETT------SCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC-EEEECC------CCEEEcCEEEECCCccH
Confidence 55677778888889999999999999987 33 566543 34799999999999653
No 470
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=91.02 E-value=0.59 Score=39.55 Aligned_cols=54 Identities=26% Similarity=0.340 Sum_probs=40.7
Q ss_pred hhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChHHHHHHHHHHHhccCHHHHHHHHHHhhCh
Q psy14927 6 TMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPVLLKWWAQYIESTEDMDLAMKYYEEARDY 79 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~ 79 (1074)
+...|++++|+.+|+++-..+ +.++..+..+|..+...|++++|.++|.++-..
T Consensus 19 ~~~~~~~~~A~~~~~~a~~~~--------------------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 19 YYKQGDYDEAIEYYQKALELD--------------------PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHTTCHHHHHHHHHHHHHHC--------------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHhcC--------------------CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 455677788887777765222 345778889999999999999999998876443
No 471
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=90.87 E-value=0.53 Score=41.56 Aligned_cols=62 Identities=11% Similarity=0.001 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHhhChhhhhhHhhccCCHHHHHHHHHhcCChHHHHHHHHHHHhcCChHHHHHHHH
Q psy14927 50 PVLLKWWAQYIESTEDMDLAMKYYEEARDYLSMVRVLCFLQDFSRAAELANASGDTAAAYHLARQYENSGQFDEAIHFYS 129 (1074)
Q Consensus 50 ~~l~~~~a~~~e~~~~~~~A~~~y~~a~d~~~~vr~l~~~~~~~~a~~i~~~~~~~~~~~~la~~~~~~g~~~~Ai~~y~ 129 (1074)
...|...|..+...|++++|.++|.++-.. .+.+..+.+.+|..|...|++++|+++|.
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~---------------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 62 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITA---------------------QPQNPVGYSNKAMALIKLGEYTQAIQMCQ 62 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH---------------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc---------------------CCCCHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 456777888888899999999888765433 23456778899999999999999999887
Q ss_pred HhC
Q psy14927 130 VAG 132 (1074)
Q Consensus 130 ~a~ 132 (1074)
++-
T Consensus 63 ~al 65 (111)
T 2l6j_A 63 QGL 65 (111)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 472
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=90.65 E-value=0.11 Score=59.92 Aligned_cols=68 Identities=9% Similarity=0.033 Sum_probs=50.3
Q ss_pred HHHHHHHhcCCHHHHHHHHHHcCCHHHHHHHhccHHHHHHHHHHhCCcc---cHHHHHHHHHHHHHcCCHHHHHHHHHHh
Q psy14927 684 HLARQYENSGQFDEAIHFYSVAGSCGNAVRLCGQLDAVESIASELNVQS---DQDLILKCASYFARREHHDRAVQMYAIA 760 (1074)
Q Consensus 684 ~~A~~~~~~g~~~~A~~~~~kag~~~~Av~ma~~w~~a~~~A~~~~~~~---~~~~~~~~a~~~~~~~~~~~Ai~~y~~a 760 (1074)
.+|..+.+.|+|++|+.+|.++- .+-++..++. +...+..+|.-+...|++++|..+|.+
T Consensus 345 nLa~~y~~~g~~~eA~~~~~~aL----------------~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~- 407 (433)
T 3qww_A 345 QAMGVCLYMQDWEGALKYGQKII----------------KPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKK- 407 (433)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH----------------HHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHH-
T ss_pred HHHHHHHhhcCHHHHHHHHHHHH----------------HHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHH-
Confidence 88999999999999999998763 3334444433 336677888888899999999888855
Q ss_pred CCHHHHHHHHHHc
Q psy14927 761 RRYDQALSLIQTK 773 (1074)
Q Consensus 761 g~~~~Ai~~~~~~ 773 (1074)
|+++....
T Consensus 408 -----Al~i~~~~ 415 (433)
T 3qww_A 408 -----AIAIMEVA 415 (433)
T ss_dssp -----HHHHHHHH
T ss_pred -----HHHHHHHH
Confidence 45555444
No 473
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=90.48 E-value=0.68 Score=50.35 Aligned_cols=85 Identities=12% Similarity=0.085 Sum_probs=52.3
Q ss_pred hhHHhhcCCcEEEEecCCc----------cC-CCC-CCHHHHHHHHHHHHhCC-CEEEeCceEEEEEecCC-eEEEEEee
Q psy14927 922 GSVWGRLGAEVTAIEFMNA----------IG-GMG-IDGEVAKQFQRILGKQG-MQFKLGTKVTGASKSGD-NITVTIEN 987 (1074)
Q Consensus 922 A~~l~~~G~~Vtlv~~~~~----------~~-~~~-~~~~~~~~~~~~l~~~g-V~i~~~~~v~~i~~~~~-~~~v~~~~ 987 (1074)
|..+++.|.+|+|+++... +. .+. .++++.+...+.+.+.+ +.++. ..+..+...++ ...+.+.+
T Consensus 22 A~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~ 100 (304)
T 4fk1_A 22 SLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYE-KTVVMITKQSTGLFEIVTKD 100 (304)
T ss_dssp HHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEE-CCEEEEEECTTSCEEEEETT
T ss_pred HHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEe-eEEEEeeecCCCcEEEEECC
Confidence 5567789999999987532 11 011 22455555556665554 55554 44555554333 34554433
Q ss_pred ccCCCCceEEEcCEEEEccCCcccCC
Q psy14927 988 VKDPTKKEELSCDALLVCVGRRPYTH 1013 (1074)
Q Consensus 988 ~~~~g~~~~i~~D~vi~a~G~~p~~~ 1013 (1074)
+.++.+|.||+|||.+|...
T Consensus 101 ------g~~~~a~~liiATGs~p~~p 120 (304)
T 4fk1_A 101 ------HTKYLAERVLLATGMQEEFP 120 (304)
T ss_dssp ------CCEEEEEEEEECCCCEEECC
T ss_pred ------CCEEEeCEEEEccCCccccc
Confidence 46899999999999988654
No 474
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=90.30 E-value=0.071 Score=60.27 Aligned_cols=35 Identities=14% Similarity=0.150 Sum_probs=30.6
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhc-ccccccc
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQA-GDKGVKL 828 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~-~~~g~~~ 828 (1074)
..+|+|||||++|+.||+.|++ +++|+. +..||..
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~ 84 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRI 84 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCce
Confidence 3459999999999999999998 899998 8888754
No 475
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=90.25 E-value=0.063 Score=63.16 Aligned_cols=55 Identities=18% Similarity=0.309 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCC
Q psy14927 949 EVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGR 1008 (1074)
Q Consensus 949 ~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~ 1008 (1074)
.+.+.+.+.+.+ .+|++++.|++|..+++++.|++.+ .++..++.+|.||++++.
T Consensus 240 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~v~v~~~~---g~~~~~~~ad~vI~a~p~ 294 (489)
T 2jae_A 240 RIYYAFQDRIGT--DNIVFGAEVTSMKNVSEGVTVEYTA---GGSKKSITADYAICTIPP 294 (489)
T ss_dssp HHHHHHHHHHCG--GGEETTCEEEEEEEETTEEEEEEEE---TTEEEEEEESEEEECSCH
T ss_pred HHHHHHHHhcCC--CeEEECCEEEEEEEcCCeEEEEEec---CCeEEEEECCEEEECCCH
Confidence 344555555432 6799999999999887887777765 222367999999999875
No 476
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=89.89 E-value=0.068 Score=63.45 Aligned_cols=35 Identities=17% Similarity=0.182 Sum_probs=29.4
Q ss_pred chhhhhhccccchHHHHHHHhh------hhhhhcccccccc
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT------KLFTQAGDKGVKL 828 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~------~l~e~~~~~g~~~ 828 (1074)
+.+|+|||||++||+||+.|++ +++|+.+..||.+
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 3459999999999999999986 6888888777643
No 477
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=89.71 E-value=0.07 Score=62.04 Aligned_cols=35 Identities=11% Similarity=0.034 Sum_probs=30.8
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhcccccccc
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL 828 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~ 828 (1074)
+.+|+|||||++|++||+.|++ +++|+.+..||..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCce
Confidence 3459999999999999999998 8999988888765
No 478
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=89.51 E-value=0.52 Score=53.84 Aligned_cols=214 Identities=14% Similarity=0.150 Sum_probs=131.2
Q ss_pred hhcCCHHHHHHHHHHcCcccchhhhHhhh--------cHHHHHHHhh----cCCChHHHHHHHHHHHhccCHHHHHHHHH
Q psy14927 7 MKNGDIDRAIRMFEKAETHQQHVPRMLLE--------NTDKLEKYII----QSKDPVLLKWWAQYIESTEDMDLAMKYYE 74 (1074)
Q Consensus 7 ~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~--------~~~~~~~~~~----~~~~~~l~~~~a~~~e~~~~~~~A~~~y~ 74 (1074)
|+.|.|+|=+.+.|.+-..+..=+-||+. .+.++-+.+. +.+-|++ -+++|...-|.++.=.|.
T Consensus 240 E~~G~f~ELIsLlEaglglErAHmGmFTELaILYsKY~PeKlmEHlklf~sriNipKv----iracE~ahLW~ElvfLY~ 315 (624)
T 3lvg_A 240 QDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKV----LRAAEQAHLWAELVFLYD 315 (624)
T ss_dssp STTCCCTTSTTTHHHHTTSTTCCHHHHHHHHHHHHSSCTTHHHHHHTTSSSSSCCTTT----HHHHTTTTCHHHHHHHHH
T ss_pred HhCCCHHHHHHHHHHHhCCCchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccHHHH----HHHHHHHhhHHHHHHHHh
Confidence 56788888888888887666443445431 2333333332 2444444 457889999999999999
Q ss_pred HhhChhhhhhHhhccCCHHHH------HHHHHhcCChHHHHHHHHHHH---------------hcCChHHHHHHHHHhCC
Q psy14927 75 EARDYLSMVRVLCFLQDFSRA------AELANASGDTAAAYHLARQYE---------------NSGQFDEAIHFYSVAGS 133 (1074)
Q Consensus 75 ~a~d~~~~vr~l~~~~~~~~a------~~i~~~~~~~~~~~~la~~~~---------------~~g~~~~Ai~~y~~a~~ 133 (1074)
.-.+|++++-..-. .+..| .+++.+-.+.+..|..=.+|. ..=|....|+++.++++
T Consensus 316 ~ydE~DnA~ltMi~--h~~~Aw~h~~Fkdii~KVaN~EiyYKAi~FYL~e~P~lL~DLL~vL~prlDh~RvV~~~~k~~~ 393 (624)
T 3lvg_A 316 KYEEYDNAIITMMN--HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFSKVKQ 393 (624)
T ss_dssp HHTCHHHHHHTTTS--CHHHHCCGGGGTTTGGGCSCSHHHHHHHHHHTTSCCTTSHHHHHHHCTTCCSTTTHHHHHTTTC
T ss_pred cchhHHHHHHHHHh--CChhhccHHHHHHHHHHcchHHHHHHHHHHHHHhChHHHHHHHHhccccCChHHHHHHHHhcCC
Confidence 99999888766322 11111 112223345555554444444 22344666666666665
Q ss_pred hH------------------HHH-HHHHHhCchHHHHHHhhhcCchhHHHHHHHHccCC---h-hHHHHHHHHhCChHHH
Q psy14927 134 CG------------------NAV-RLCKEQALDDQLWNLALSAGPSEQIEAATYLETIE---P-DKAVLLYHKAGALHKA 190 (1074)
Q Consensus 134 ~~------------------~A~-~la~~~~~~~~~~~l~~~~~~~~~~~~A~~~e~~~---~-~~A~~ly~kaG~~~kA 190 (1074)
.. +|+ +|.-+-.-.+.+-+-......-+.+..|+-+|+-. | .-|..+|.|.+++.+|
T Consensus 394 LpLIkpYL~~Vq~~N~~aVNeAln~L~IEEEDy~~LR~SId~ydNFD~i~LA~rLEkHeL~eFRrIAA~LYkkn~rw~qs 473 (624)
T 3lvg_A 394 LPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQS 473 (624)
T ss_dssp GGGGTGGGTSCCCSCCHHHHHHHHHHHHHTTCCHHHHHTTSSCCCSCTTHHHHHHHTCSSHHHHHHHHHHHHTTCHHHHH
T ss_pred chhhHHHHHHHHHhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccHHHHHHHHhhCchHHHHHHHHHHHHhcccHHHH
Confidence 32 111 11111111111111122234455677899999954 4 3399999999999999
Q ss_pred HHHHHhhccCCcchHHHHHHHHHHhcCCChhhHHHhhhhcchHHHHHHHHHHHhcC
Q psy14927 191 LDLAFKLTLSNSGLVFQIKAMKCLLKSGDTNKIIFFAGVSRMKEIYVMAANYLQSS 246 (1074)
Q Consensus 191 l~l~~~~~~~~~~~~~~~~a~k~l~~~~~~~~~i~~a~~~r~~~l~~~aa~yl~~~ 246 (1074)
+.+|-+ .+-+..+|+.|..|++.++-.-+.+|+-..
T Consensus 474 i~l~Kk--------------------DklykDAietAa~S~~~elaeeLL~yFv~~ 509 (624)
T 3lvg_A 474 VELCKK--------------------DSLYKDAMQYASESKDTELAEELLQWFLQE 509 (624)
T ss_dssp SSCSST--------------------TCCTTGGGTTTTTCCCTTHHHHHHHHHHHH
T ss_pred HHHHHh--------------------cccHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 999877 677888999999999988888777776543
No 479
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=89.46 E-value=1.4 Score=48.01 Aligned_cols=95 Identities=14% Similarity=0.185 Sum_probs=51.3
Q ss_pred hhhcCCHHHHHHHHHHc-------Ccccchh--hhHhh--hcHHHHHHHhhc---CCC------hHHHHHHHHH--HHhc
Q psy14927 6 TMKNGDIDRAIRMFEKA-------ETHQQHV--PRMLL--ENTDKLEKYIIQ---SKD------PVLLKWWAQY--IEST 63 (1074)
Q Consensus 6 ~~~~g~~~eA~~~Ye~~-------~~~~~~~--~~~~~--~~~~~~~~~~~~---~~~------~~l~~~~a~~--~e~~ 63 (1074)
++..|++++|.++|+++ +..+..+ .++++ ++.+.+..++.+ ..+ ..++.++++. ...+
T Consensus 110 ~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~ 189 (310)
T 3mv2_B 110 QAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFAT 189 (310)
T ss_dssp HHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHh
Confidence 45568899999999887 2222111 33333 456666555533 221 3455555433 3333
Q ss_pred c--CHHHHHHHHHHhhChhh-------hhhHhhccCCHHHHHHHHH
Q psy14927 64 E--DMDLAMKYYEEARDYLS-------MVRVLCFLQDFSRAAELAN 100 (1074)
Q Consensus 64 ~--~~~~A~~~y~~a~d~~~-------~vr~l~~~~~~~~a~~i~~ 100 (1074)
| ++..|...|...-+-.. +..++.++|++++|.++.+
T Consensus 190 g~~~~q~A~~~f~El~~~~p~~~~~~lLln~~~~~g~~~eAe~~L~ 235 (310)
T 3mv2_B 190 NKETATSNFYYYEELSQTFPTWKTQLGLLNLHLQQRNIAEAQGIVE 235 (310)
T ss_dssp TCSTTTHHHHHHHHHHTTSCSHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHhCCCcccHHHHHHHHHHcCCHHHHHHHHH
Confidence 3 77777777766433321 1223556777777776654
No 480
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=89.33 E-value=26 Score=40.77 Aligned_cols=95 Identities=12% Similarity=0.115 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHhcCCCCCChhHHHHHHHHHHccCCHHHHHHHHHHHHhHHHHhhcCHHHHHHHHHHHHHHHHhcCCCchH
Q psy14927 233 KEIYVMAANYLQSSDWKSQPELLKSIISFYSKGKAPHLLANFYVSCAQVEIDEFGNYEKGLGALNEAKRCLLKHNDSMYE 312 (1074)
Q Consensus 233 ~~l~~~aa~yl~~~~~~~~~~~~~~i~~~Y~k~~~~~~aa~~~~~~a~~ei~e~~~y~~a~~~l~~a~~~l~~~~~~~~~ 312 (1074)
..+|..-++++... +.+..+-..|.+++........|...|..|..--++++.|...+..+++.+.+ .|
T Consensus 286 ~~lw~~y~~~~~r~------~~~~~AR~i~~~A~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~----~~- 354 (493)
T 2uy1_A 286 DLLRINHLNYVLKK------RGLELFRKLFIELGNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPD----ST- 354 (493)
T ss_dssp HHHHHHHHHHHHHH------HCHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTT----CH-
T ss_pred HHHHHHHHHHHHHc------CCHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCC----CH-
Confidence 46788888887655 23455555566663222233567777999944444799999999999986532 23
Q ss_pred HHHHHHHHHHHHHHHhhcCChHHHhhHHHHH
Q psy14927 313 TLKSSVVEKLAEVEIDEFGNYEKGLGALNEA 343 (1074)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 343 (1074)
++.. .-..+.++ .|+.+.|-.++.|+
T Consensus 355 ~~~~----~yid~e~~-~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 355 LLKE----EFFLFLLR-IGDEENARALFKRL 380 (493)
T ss_dssp HHHH----HHHHHHHH-HTCHHHHHHHHHHS
T ss_pred HHHH----HHHHHHHH-cCCHHHHHHHHHHH
Confidence 2211 11223445 47777766666665
No 481
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=89.33 E-value=0.079 Score=62.06 Aligned_cols=35 Identities=17% Similarity=0.167 Sum_probs=30.5
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhcccccccc
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL 828 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~ 828 (1074)
..+|+|||||++|++||+.|++ +++|+.+..||..
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAV 55 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 3459999999999999999998 8999999888765
No 482
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=88.86 E-value=0.099 Score=60.91 Aligned_cols=56 Identities=16% Similarity=0.211 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEec--CCeE-EEEEeeccCCCCceEEEcCEEEEccCCcc
Q psy14927 948 GEVAKQFQRILGKQGMQFKLGTKVTGASKS--GDNI-TVTIENVKDPTKKEELSCDALLVCVGRRP 1010 (1074)
Q Consensus 948 ~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~--~~~~-~v~~~~~~~~g~~~~i~~D~vi~a~G~~p 1010 (1074)
..+.+.+.+.+++.|+++++++.|++|..+ ++++ .|.. + +.++.+|.||+++|..|
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~------g~~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-K------LGTFKAPLVIADPTYFP 300 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-T------TEEEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-C------CeEEECCEEEECCCccc
Confidence 467788888889999999999999999876 5543 3332 2 46799999999988754
No 483
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=88.64 E-value=0.096 Score=61.67 Aligned_cols=37 Identities=16% Similarity=0.074 Sum_probs=0.0
Q ss_pred cchhhhhhccccchHHHHHHHhh-----hhhhhccccccccc
Q psy14927 793 QRQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLN 829 (1074)
Q Consensus 793 ~k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~ 829 (1074)
.+.+|+|||||++|++||+.|++ +++|+.+..||...
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~ 79 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSW 79 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCC
T ss_pred cCCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcce
No 484
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=88.21 E-value=3.3 Score=48.59 Aligned_cols=52 Identities=15% Similarity=0.206 Sum_probs=29.8
Q ss_pred ChHHHHHHHHHHHhccCHHHHHHHHHHhhC---------hhhhhhHhhccCCHHHHHHHHH
Q psy14927 49 DPVLLKWWAQYIESTEDMDLAMKYYEEARD---------YLSMVRVLCFLQDFSRAAELAN 100 (1074)
Q Consensus 49 ~~~l~~~~a~~~e~~~~~~~A~~~y~~a~d---------~~~~vr~l~~~~~~~~a~~i~~ 100 (1074)
+...+..+-..+-..|++++|.+.|..-.. |..++..||..|++++|.++.+
T Consensus 104 d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~ 164 (501)
T 4g26_A 104 NEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDA 164 (501)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHH
Confidence 334444555555566666666666654321 3455555666666666666654
No 485
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=88.17 E-value=0.11 Score=59.17 Aligned_cols=36 Identities=14% Similarity=-0.054 Sum_probs=31.2
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhccccccccc
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKLN 829 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~~ 829 (1074)
+.+|+|||||++|+++|+.|++ +++|+.+..||...
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGC
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccc
Confidence 4469999999999999999988 79999888887654
No 486
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=88.06 E-value=0.67 Score=40.26 Aligned_cols=54 Identities=19% Similarity=0.250 Sum_probs=41.8
Q ss_pred HhhhcCCHHHHHHHHHHcCcccchhhhHhhhcHHHHHHHhhcCCChH-HHHHHHHHHHhccCHHHHHHHHHHhhC
Q psy14927 5 ETMKNGDIDRAIRMFEKAETHQQHVPRMLLENTDKLEKYIIQSKDPV-LLKWWAQYIESTEDMDLAMKYYEEARD 78 (1074)
Q Consensus 5 ~~~~~g~~~eA~~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~a~~~e~~~~~~~A~~~y~~a~d 78 (1074)
.+...|++++|+..|+++-..+ ++++. .+..+|..+...|++++|.++|.++=.
T Consensus 9 ~~~~~~~~~~A~~~~~~al~~~--------------------p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 9 ELINQGDIENALQALEEFLQTE--------------------PVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHC--------------------SSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHC--------------------CCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3456788888888887765322 34567 889999999999999999999987643
No 487
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=88.05 E-value=6.8 Score=45.85 Aligned_cols=25 Identities=8% Similarity=0.025 Sum_probs=15.2
Q ss_pred CCCChhHHHHHHHHHHccCCHHHHH
Q psy14927 248 WKSQPELLKSIISFYSKGKAPHLLA 272 (1074)
Q Consensus 248 ~~~~~~~~~~i~~~Y~k~~~~~~aa 272 (1074)
...+...+..++..|.++|.+++|-
T Consensus 171 ~~Pd~~ty~~Li~~~~~~g~~d~A~ 195 (501)
T 4g26_A 171 VVPEEPELAALLKVSMDTKNADKVY 195 (501)
T ss_dssp CCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCCHHHHHHHHHHHhhCCCHHHHH
Confidence 4455566667777776666555443
No 488
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=87.98 E-value=0.99 Score=49.01 Aligned_cols=86 Identities=16% Similarity=0.143 Sum_probs=57.1
Q ss_pred hhHHhhcCCcEEEEecCCccC---------------CCCC-----CHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeE
Q psy14927 922 GSVWGRLGAEVTAIEFMNAIG---------------GMGI-----DGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNI 981 (1074)
Q Consensus 922 A~~l~~~G~~Vtlv~~~~~~~---------------~~~~-----~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~ 981 (1074)
|..+++.|.+|+|+++..... .+.+ .+++...+.+.+++.++.+.... +..+....+..
T Consensus 20 A~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~ 98 (314)
T 4a5l_A 20 AIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIITET-IDHVDFSTQPF 98 (314)
T ss_dssp HHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSE
T ss_pred HHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEEEeE-EEEeecCCCce
Confidence 556778899999998754200 0112 24566777788889999988654 55555544444
Q ss_pred EEEEeeccCCCCceEEEcCEEEEccCCcccCCc
Q psy14927 982 TVTIENVKDPTKKEELSCDALLVCVGRRPYTHN 1014 (1074)
Q Consensus 982 ~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 1014 (1074)
.+... .+.++.+|.||+|||.+|....
T Consensus 99 ~~~~~------~~~~~~~~~liiATG~~~~~~~ 125 (314)
T 4a5l_A 99 KLFTE------EGKEVLTKSVIIATGATAKRMH 125 (314)
T ss_dssp EEEET------TCCEEEEEEEEECCCEEECCCC
T ss_pred EEEEC------CCeEEEEeEEEEcccccccccC
Confidence 44332 2568999999999999886543
No 489
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=87.72 E-value=1.8 Score=51.73 Aligned_cols=60 Identities=12% Similarity=0.152 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEecC-Ce-EEEEEeeccCCCCceEEEcCEEEEccCCc
Q psy14927 948 GEVAKQFQRILGKQGMQFKLGTKVTGASKSG-DN-ITVTIENVKDPTKKEELSCDALLVCVGRR 1009 (1074)
Q Consensus 948 ~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~-~~-~~v~~~~~~~~g~~~~i~~D~vi~a~G~~ 1009 (1074)
..+...+.+.+++.||++++++.++++..++ +. ..|.+.+. +|+..++.+|.||+|+|..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~--~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGM--YKGYYWVKADAVILATGGF 316 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEET--TTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeC--CCcEEEEECCeEEEeCCCc
Confidence 5677788888899999999999999998754 33 33555531 2444579999999999874
No 490
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=87.57 E-value=0.84 Score=51.79 Aligned_cols=43 Identities=7% Similarity=0.187 Sum_probs=35.9
Q ss_pred CCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCc
Q psy14927 961 QGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRR 1009 (1074)
Q Consensus 961 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~ 1009 (1074)
.|++++++++|+++..+++++.|++.+ +.++.+|.||.|.|..
T Consensus 110 ~~~~i~~~~~v~~i~~~~~~v~v~~~~------g~~~~ad~vV~AdG~~ 152 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDSETVQMRFSD------GTKAEANWVIGADGGA 152 (397)
T ss_dssp CSTTEETTCCEEEEEECSSCEEEEETT------SCEEEESEEEECCCTT
T ss_pred CCcEEEcCCEEEEEEecCCEEEEEECC------CCEEECCEEEECCCcc
Confidence 489999999999999877777777654 3579999999999974
No 491
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=87.45 E-value=0.12 Score=60.88 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=30.5
Q ss_pred hhhhhhccccchHHHHHHHhh-----hhhhhcccccccc
Q psy14927 795 QVVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL 828 (1074)
Q Consensus 795 ~~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~ 828 (1074)
.+|+|||||++||++|+.|++ +++|+.+..||..
T Consensus 14 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 14 KRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCce
Confidence 459999999999999999998 8999999888764
No 492
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=87.11 E-value=0.14 Score=60.41 Aligned_cols=56 Identities=16% Similarity=0.376 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCc
Q psy14927 949 EVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRR 1009 (1074)
Q Consensus 949 ~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~ 1009 (1074)
.+.+.+.+.+.. +|++++.|++|..+++++.|++.+.. +...++.+|.||++++..
T Consensus 242 ~l~~~l~~~l~~---~i~~~~~V~~I~~~~~~v~v~~~~~~--~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 242 KLPTAMYRDIQD---KVHFNAQVIKIQQNDQKVTVVYETLS--KETPSVTADYVIVCTTSR 297 (498)
T ss_dssp HHHHHHHHHTGG---GEESSCEEEEEEECSSCEEEEEECSS--SCCCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccc---ccccCCEEEEEEECCCeEEEEEecCC--cccceEEeCEEEECCChH
Confidence 344445454443 78999999999987777777766511 112368999999998753
No 493
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=86.64 E-value=3.1 Score=45.25 Aligned_cols=62 Identities=18% Similarity=0.174 Sum_probs=32.2
Q ss_pred HHHHHhhcC-CChHHHHHHHHHHHhccCHHHHHHHHHHh-------hChh---hhhhHhhccCCHHHHHHHHH
Q psy14927 39 KLEKYIIQS-KDPVLLKWWAQYIESTEDMDLAMKYYEEA-------RDYL---SMVRVLCFLQDFSRAAELAN 100 (1074)
Q Consensus 39 ~~~~~~~~~-~~~~l~~~~a~~~e~~~~~~~A~~~y~~a-------~d~~---~~vr~l~~~~~~~~a~~i~~ 100 (1074)
.+++++... .++..+...|..++..|++++|++.+.+. ++.+ -.|+++..+|+++.|.++.+
T Consensus 88 ~l~~l~~~~~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~ 160 (310)
T 3mv2_B 88 ELENLLKDKQNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFD 160 (310)
T ss_dssp HHHHTTTTSCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 344444332 33333445566666666666666666665 2222 23444666666666666654
No 494
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=86.57 E-value=0.12 Score=59.78 Aligned_cols=29 Identities=10% Similarity=0.131 Sum_probs=24.8
Q ss_pred chhhhhhccccchHHHHHHHhh-----hhhhhcc
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT-----KLFTQAG 822 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~-----~l~e~~~ 822 (1074)
+++|+||||||+|+++|+.|++ +++|+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3459999999999999999999 7888754
No 495
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=86.52 E-value=2.2 Score=46.73 Aligned_cols=45 Identities=4% Similarity=0.098 Sum_probs=34.6
Q ss_pred CCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccCCccc
Q psy14927 962 GMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVGRRPY 1011 (1074)
Q Consensus 962 gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G~~p~ 1011 (1074)
|++++++++|++++.+++++.|++.+ | .....+|.||.|+|....
T Consensus 119 g~~i~~~~~v~~i~~~~~~~~v~~~~----g-~~~~~a~~vV~a~g~~~~ 163 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGEEHWNLLDAE----G-QNHGPFSHVIIATPAPQA 163 (336)
T ss_dssp TCCEECSCCEEEEEECSSCEEEEETT----S-CEEEEESEEEECSCHHHH
T ss_pred cCcEEecCEEEEEEEeCCEEEEEeCC----C-cCccccCEEEEcCCHHHH
Confidence 89999999999999877777776443 3 233459999999997543
No 496
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=86.48 E-value=4.8 Score=46.09 Aligned_cols=68 Identities=12% Similarity=0.114 Sum_probs=49.7
Q ss_pred HHHHHHHhcCCHHHHHHHHHHcCCHHHHHHHhccHHHHHHHHHHhCCcccH---HHHHHHHHHHHHcCCHHHHHHHHHHh
Q psy14927 684 HLARQYENSGQFDEAIHFYSVAGSCGNAVRLCGQLDAVESIASELNVQSDQ---DLILKCASYFARREHHDRAVQMYAIA 760 (1074)
Q Consensus 684 ~~A~~~~~~g~~~~A~~~~~kag~~~~Av~ma~~w~~a~~~A~~~~~~~~~---~~~~~~a~~~~~~~~~~~Ai~~y~~a 760 (1074)
.+|..+...|+|++|+.+|.++ ..+-++..++..+ ..+..+|.-+...|++++|..+|.+
T Consensus 334 ~L~~~y~~~g~~~eA~~~~~~~----------------L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~- 396 (429)
T 3qwp_A 334 CAMDACINLGLLEEALFYGTRT----------------MEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRL- 396 (429)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHH----------------HHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHH-
T ss_pred HHHHHHHhhccHHHHHHHHHHH----------------HHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHH-
Confidence 7899999999999999998776 3344444454443 6677888888889999999888755
Q ss_pred CCHHHHHHHHHHc
Q psy14927 761 RRYDQALSLIQTK 773 (1074)
Q Consensus 761 g~~~~Ai~~~~~~ 773 (1074)
|++++...
T Consensus 397 -----Al~i~~~~ 404 (429)
T 3qwp_A 397 -----AFDIMRVT 404 (429)
T ss_dssp -----HHHHHHHH
T ss_pred -----HHHHHHHh
Confidence 45555444
No 497
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=86.41 E-value=0.16 Score=57.35 Aligned_cols=33 Identities=6% Similarity=-0.061 Sum_probs=29.1
Q ss_pred hhhhhccccchHHHHHHHhh-----hhhhhcccccccc
Q psy14927 796 VVLNTLGNCAAVQANYHLAT-----KLFTQAGDKGVKL 828 (1074)
Q Consensus 796 ~VviiGgG~AGl~aA~~la~-----~l~e~~~~~g~~~ 828 (1074)
+|+|||||++|+++|+.|++ +++|+.+..||..
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGG
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcce
Confidence 48999999999999999988 7999988877754
No 498
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=86.29 E-value=0.2 Score=61.41 Aligned_cols=51 Identities=24% Similarity=0.351 Sum_probs=37.6
Q ss_pred HHHHhCCCEEEeCceEEEEEecCCeEEEEEeeccCCCCceEEEcCEEEEccC
Q psy14927 956 RILGKQGMQFKLGTKVTGASKSGDNITVTIENVKDPTKKEELSCDALLVCVG 1007 (1074)
Q Consensus 956 ~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~i~~D~vi~a~G 1007 (1074)
+.|.+ +++|++++.|++|..+++++.|++.+...++.+.++.+|.||++++
T Consensus 405 ~~La~-~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP 455 (662)
T 2z3y_A 405 VALAE-GLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLP 455 (662)
T ss_dssp HHHTT-TCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCC
T ss_pred HHHHh-cCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCC
Confidence 33433 6799999999999988888888776522123357899999999876
No 499
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=86.28 E-value=0.17 Score=59.55 Aligned_cols=36 Identities=11% Similarity=0.063 Sum_probs=30.6
Q ss_pred chhhhhhccccchHHHHHHHhh------hhhhhccccccccc
Q psy14927 794 RQVVLNTLGNCAAVQANYHLAT------KLFTQAGDKGVKLN 829 (1074)
Q Consensus 794 k~~VviiGgG~AGl~aA~~la~------~l~e~~~~~g~~~~ 829 (1074)
+.+|+|||||++|+++|+.|++ +++|+.+..||...
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~ 50 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSR 50 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGC
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeee
Confidence 3459999999999999999987 78898888887654
No 500
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=86.28 E-value=1.9 Score=46.80 Aligned_cols=84 Identities=15% Similarity=0.119 Sum_probs=55.2
Q ss_pred hhHHhhcCCcEEEEecCCc---cC-------CCC----CCHHHHHHHHHHHHhCCCEEEeCceEEEEEecCCeEEEEEee
Q psy14927 922 GSVWGRLGAEVTAIEFMNA---IG-------GMG----IDGEVAKQFQRILGKQGMQFKLGTKVTGASKSGDNITVTIEN 987 (1074)
Q Consensus 922 A~~l~~~G~~Vtlv~~~~~---~~-------~~~----~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~ 987 (1074)
|..+++.|.+|+|+++... +. .|. ..+++.........+.++.+..+.......... .. +...+
T Consensus 22 A~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~ 99 (312)
T 4gcm_A 22 AVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGE-YK-VINFG 99 (312)
T ss_dssp HHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSS-CE-EEECS
T ss_pred HHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeeeeeeec-ce-eeccC
Confidence 5667889999999987531 10 011 125666666777788888888876665554432 22 22122
Q ss_pred ccCCCCceEEEcCEEEEccCCcccCC
Q psy14927 988 VKDPTKKEELSCDALLVCVGRRPYTH 1013 (1074)
Q Consensus 988 ~~~~g~~~~i~~D~vi~a~G~~p~~~ 1013 (1074)
+.++.+|.+|+|||.+|...
T Consensus 100 ------~~~~~~d~liiAtGs~~~~~ 119 (312)
T 4gcm_A 100 ------NKELTAKAVIIATGAEYKKI 119 (312)
T ss_dssp ------SCEEEEEEEEECCCEEECCC
T ss_pred ------CeEEEeceeEEcccCccCcC
Confidence 46899999999999988654
Done!