Your job contains 1 sequence.
>psy14933
MMRDFVGIECCDEVTRSAVINFSYYLNTGDLDQAFKSIAFITRLDVACICLGNMRDIQGI
WTLRYAQAEPELEARVAALAIHLQLYVSDYSAADFPLSKL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14933
(100 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1P2U6 - symbol:IFT140 "Uncharacterized protein... 216 3.2e-16 1
RGD|2318759 - symbol:Ift140 "intraflagellar transport 140... 216 3.3e-16 1
UNIPROTKB|F1RG13 - symbol:IFT140 "Uncharacterized protein... 211 1.1e-15 1
UNIPROTKB|Q96RY7 - symbol:IFT140 "Intraflagellar transpor... 209 1.9e-15 1
UNIPROTKB|E1B860 - symbol:IFT140 "Uncharacterized protein... 208 2.4e-15 1
WB|WBGene00000490 - symbol:che-11 species:6239 "Caenorhab... 156 8.0e-10 1
UNIPROTKB|Q68K27 - symbol:IFT140 "Intraflagellar transpor... 145 1.1e-08 1
FB|FBgn0260933 - symbol:rempA "reduced mechanoreceptor po... 130 4.9e-07 1
UNIPROTKB|Q9UG52 - symbol:DKFZp564L232 "Intraflagellar tr... 118 3.4e-06 1
>UNIPROTKB|F1P2U6 [details] [associations]
symbol:IFT140 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0032391 "photoreceptor connecting cilium"
evidence=IEA] [GO:0035085 "cilium axoneme" evidence=IEA]
[GO:0036064 "cilium basal body" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0032391
GO:GO:0035085 OMA:DCDKATR GeneTree:ENSGT00390000007515
EMBL:AADN02049469 IPI:IPI00576257 Ensembl:ENSGALT00000015164
Uniprot:F1P2U6
Length = 1411
Score = 216 (81.1 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 50/98 (51%), Positives = 61/98 (62%)
Query: 2 MRDFVGIECCDEVTRSAVINFSYYLNTGDLDQAFKSIAFIT----------------RLD 45
MRDF+G+ CD+ TR A++NFS+YL GD+D+AFKSI I RLD
Sbjct: 751 MRDFIGLGDCDKATRDAMLNFSFYLTAGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLD 810
Query: 46 VACICLGNMRDIQGIWTLRYAQAEPELEARVAALAIHL 83
VA ICLGNM +G LR A+ EPE EARVA LA+ L
Sbjct: 811 VAKICLGNMGHARGARALREAEQEPEQEARVAVLAVQL 848
>RGD|2318759 [details] [associations]
symbol:Ift140 "intraflagellar transport 140" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=ISO] [GO:0030991
"intraflagellar transport particle A" evidence=ISO] [GO:0032391
"photoreceptor connecting cilium" evidence=ISO] [GO:0035085 "cilium
axoneme" evidence=ISO] [GO:0036064 "cilium basal body"
evidence=ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 RGD:2318759 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0042384 GO:GO:0032391 GO:GO:0035085
GeneTree:ENSGT00390000007515 IPI:IPI00368713
Ensembl:ENSRNOT00000022063 Uniprot:F1LY69
Length = 1433
Score = 216 (81.1 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 50/98 (51%), Positives = 63/98 (64%)
Query: 2 MRDFVGIECCDEVTRSAVINFSYYLNTGDLDQAFKSIAFIT----------------RLD 45
+RDFVG+E CD+ TR A++NFS+++ GD+D+AFKSI I RLD
Sbjct: 730 LRDFVGLEDCDKPTRDAMLNFSFFVTIGDMDEAFKSIKLIKSETVWENMARMCVKTQRLD 789
Query: 46 VACICLGNMRDIQGIWTLRYAQAEPELEARVAALAIHL 83
VA +CLGNM +G LR A+ EPELEARVA LAI L
Sbjct: 790 VAKVCLGNMGHARGARALREAEREPELEARVAMLAIQL 827
>UNIPROTKB|F1RG13 [details] [associations]
symbol:IFT140 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0036064
"cilium basal body" evidence=IEA] [GO:0035085 "cilium axoneme"
evidence=IEA] [GO:0032391 "photoreceptor connecting cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0042384
GO:GO:0032391 GO:GO:0035085 OMA:DCDKATR
GeneTree:ENSGT00390000007515 EMBL:CU694571
Ensembl:ENSSSCT00000008789 Uniprot:F1RG13
Length = 1453
Score = 211 (79.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 49/98 (50%), Positives = 62/98 (63%)
Query: 2 MRDFVGIECCDEVTRSAVINFSYYLNTGDLDQAFKSIAFIT----------------RLD 45
+RDFVG+E CD+ TR A++NFS +L GD+D+AF+SI I RLD
Sbjct: 758 LRDFVGLEDCDKATRDAMLNFSVFLTVGDMDEAFRSIRLIKSEAVWENMARMCVKTQRLD 817
Query: 46 VACICLGNMRDIQGIWTLRYAQAEPELEARVAALAIHL 83
VA +CLG+M +G LR A+ EPELEARVA LAI L
Sbjct: 818 VAKVCLGHMGHARGARALREAEREPELEARVAVLAIQL 855
>UNIPROTKB|Q96RY7 [details] [associations]
symbol:IFT140 "Intraflagellar transport protein 140
homolog" species:9606 "Homo sapiens" [GO:0032391 "photoreceptor
connecting cilium" evidence=IEA] [GO:0035085 "cilium axoneme"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0036064 "cilium basal body" evidence=IDA] [GO:0030991
"intraflagellar transport particle A" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50005 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 EMBL:CH471112 GO:GO:0042384
GO:GO:0032391 GO:GO:0035085 EMBL:AE006467 GO:GO:0036064
EMBL:AL031705 EMBL:Z97652 EMBL:AB011162 EMBL:AL031719 EMBL:AL133297
EMBL:Z97633 EMBL:BC035577 IPI:IPI00642186 PIR:T00345
RefSeq:NP_055529.2 UniGene:Hs.389438 ProteinModelPortal:Q96RY7
SMR:Q96RY7 IntAct:Q96RY7 STRING:Q96RY7 PhosphoSite:Q96RY7
DMDM:74761083 PaxDb:Q96RY7 PRIDE:Q96RY7 Ensembl:ENST00000426508
GeneID:9742 KEGG:hsa:9742 UCSC:uc002clz.3 CTD:9742
GeneCards:GC16M001560 HGNC:HGNC:29077 HPA:HPA042197 MIM:266920
MIM:614620 neXtProt:NX_Q96RY7 Orphanet:474 Orphanet:140969
PharmGKB:PA142671665 eggNOG:NOG301450 HOGENOM:HOG000230867
HOVERGEN:HBG055589 InParanoid:Q96RY7 OMA:DCDKATR OrthoDB:EOG4MGS6J
ChiTaRS:IFT140 GenomeRNAi:9742 NextBio:36659 ArrayExpress:Q96RY7
Bgee:Q96RY7 CleanEx:HS_IFT140 Genevestigator:Q96RY7
GermOnline:ENSG00000187535 Uniprot:Q96RY7
Length = 1462
Score = 209 (78.6 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 48/98 (48%), Positives = 62/98 (63%)
Query: 2 MRDFVGIECCDEVTRSAVINFSYYLNTGDLDQAFKSIAFIT----------------RLD 45
+RDFVG+E CD+ TR A+++FS+++ GD+D+AFKSI I RLD
Sbjct: 759 LRDFVGLEDCDKATRDAMLHFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLD 818
Query: 46 VACICLGNMRDIQGIWTLRYAQAEPELEARVAALAIHL 83
VA +CLGNM +G LR A+ EPELEARVA LA L
Sbjct: 819 VAKVCLGNMGHARGARALREAEQEPELEARVAVLATQL 856
>UNIPROTKB|E1B860 [details] [associations]
symbol:IFT140 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0036064
"cilium basal body" evidence=IEA] [GO:0035085 "cilium axoneme"
evidence=IEA] [GO:0032391 "photoreceptor connecting cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
Gene3D:1.25.40.10 GO:GO:0042384 GO:GO:0032391 GO:GO:0035085
OMA:DCDKATR GeneTree:ENSGT00390000007515 EMBL:DAAA02057304
EMBL:DAAA02057300 EMBL:DAAA02057301 EMBL:DAAA02057302
EMBL:DAAA02057303 IPI:IPI00840603 Ensembl:ENSBTAT00000047406
Uniprot:E1B860
Length = 1468
Score = 208 (78.3 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 49/98 (50%), Positives = 62/98 (63%)
Query: 2 MRDFVGIECCDEVTRSAVINFSYYLNTGDLDQAFKSIAFIT----------------RLD 45
+RDFVG+E CD+ TR A+INFS++L GD+D+AF+SI I RLD
Sbjct: 764 LRDFVGLEDCDKPTRDAMINFSFFLTIGDMDEAFRSIKLIKSQAVWENMARMCVKTQRLD 823
Query: 46 VACICLGNMRDIQGIWTLRYAQAEPELEARVAALAIHL 83
VA +CLG+M +G LR AQ EPE EARVA LA+ L
Sbjct: 824 VARVCLGHMGHARGARALREAQREPEPEARVAMLAVQL 861
>WB|WBGene00000490 [details] [associations]
symbol:che-11 species:6239 "Caenorhabditis elegans"
[GO:0006979 "response to oxidative stress" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0009408 "response to heat" evidence=IMP] [GO:0006972
"hyperosmotic response" evidence=IMP] [GO:0042073 "intraflagellar
transport" evidence=ISS] [GO:0030991 "intraflagellar transport
particle A" evidence=ISS] [GO:0031513 "nonmotile primary cilium"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR015943 SMART:SM00320 GO:GO:0008340
GO:GO:0006979 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0009408
GO:GO:0006972 Gene3D:1.25.40.10 GO:GO:0042073 GO:GO:0031513
EMBL:Z81041 eggNOG:NOG301450 OMA:DCDKATR RefSeq:NP_506047.5
UniGene:Cel.6178 ProteinModelPortal:P90757 SMR:P90757 STRING:P90757
EnsemblMetazoa:C27A7.4 GeneID:179666 KEGG:cel:CELE_C27A7.4
UCSC:C27A7.4 CTD:179666 WormBase:C27A7.4
GeneTree:ENSGT00390000007515 HOGENOM:HOG000022469 InParanoid:P90757
NextBio:906366 GO:GO:0030991 Uniprot:P90757
Length = 1437
Score = 156 (60.0 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 38/100 (38%), Positives = 60/100 (60%)
Query: 2 MRDFVGIECCDEVTRSAVINFSYYLNTGDLDQAFKSIAFIT----------------RLD 45
+R+F+G E CDE TR A+++FS+YL G +D AFK+I FI RLD
Sbjct: 732 LREFLGNENCDESTRKAMMDFSFYLTIGSMDAAFKAIQFIKSDSVWDHMASMSIKTRRLD 791
Query: 46 VACICLGNMRDIQGIWTLRYAQAEPELEARVAALAIHLQL 85
VA +CLG+M++++G +R +Q E ++ A A+ ++L
Sbjct: 792 VAMVCLGHMKNVRGARAVRRSQQNGENDSMKCA-ALAIEL 830
>UNIPROTKB|Q68K27 [details] [associations]
symbol:IFT140 "Intraflagellar transport particle protein
140" species:3055 "Chlamydomonas reinhardtii" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0019861 Gene3D:2.130.10.10
SUPFAM:SSF50978 Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
EMBL:AY686103 ProteinModelPortal:Q68K27 IntAct:Q68K27
Uniprot:Q68K27
Length = 1384
Score = 145 (56.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 38/99 (38%), Positives = 57/99 (57%)
Query: 1 MMRDFVGIECCDEVTRSAVINFSYYLNTGDLDQAFKSIAFIT----------------RL 44
+M F G++ D+ TR A+++FS+ L TG++D+AF+S+ I RL
Sbjct: 678 IMTSFQGMQDSDDKTRRALLDFSFNLATGNMDEAFRSVKAIKNPAVWENMAHMCIRNKRL 737
Query: 45 DVACICLGNMRDIQGIWTLRYAQAEPELEARVAALAIHL 83
DVA CL NM +G LR A++ E +ARVA +A+HL
Sbjct: 738 DVAEHCLSNMEHARGARALREAKSIEEADARVATVAVHL 776
>FB|FBgn0260933 [details] [associations]
symbol:rempA "reduced mechanoreceptor potential A"
species:7227 "Drosophila melanogaster" [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0035058 "nonmotile primary cilium assembly"
evidence=ISS;IMP] [GO:0031513 "nonmotile primary cilium"
evidence=IDA] [GO:0042384 "cilium assembly" evidence=ISM;IEP]
[GO:0042073 "intraflagellar transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011990
InterPro:IPR015943 PROSITE:PS50294 SMART:SM00320 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0007605 Gene3D:1.25.40.10
GO:GO:0042073 GO:GO:0035058 GeneTree:ENSGT00390000007515
UniGene:Dm.36349 DNASU:33230 GeneID:33230 KEGG:dme:Dmel_CG11838
CTD:33230 FlyBase:FBgn0260933 ChiTaRS:rempA GenomeRNAi:33230
NextBio:782561 RefSeq:NP_995608.1 ProteinModelPortal:Q7KTZ4
STRING:Q7KTZ4 PRIDE:Q7KTZ4 EnsemblMetazoa:FBtr0078078
UCSC:CG11838-RB InParanoid:Q7KTZ4 OMA:HRAGMLH PhylomeDB:Q7KTZ4
ArrayExpress:Q7KTZ4 Bgee:Q7KTZ4 Uniprot:Q7KTZ4
Length = 1503
Score = 130 (50.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 31/100 (31%), Positives = 53/100 (53%)
Query: 2 MRDFVGIECCDEVTRSAVINFSYYLNTGDLDQAFKSIAFI----------------TRLD 45
++DFV ++ C+ VTR V+NFS Y+ G++D A++SI I RLD
Sbjct: 791 LQDFVDLQQCNPVTRKQVLNFSLYVAEGNMDMAYRSIRSIQSKVIWTNLAKMCVHTNRLD 850
Query: 46 VACICLGNMRDIQGIWTLRYAQAEPELEARVAALAIHLQL 85
VA +C+G++ + + LR A + +LE + ++L
Sbjct: 851 VAKVCMGHLEQARSVRALRQAIEDDDLETEAKVAVLAIEL 890
>UNIPROTKB|Q9UG52 [details] [associations]
symbol:DKFZp564L232 "Intraflagellar transport protein 140
homolog" species:9606 "Homo sapiens" [GO:0032391 "photoreceptor
connecting cilium" evidence=IEA] [GO:0035085 "cilium axoneme"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
InterPro:IPR011990 Gene3D:1.25.40.10 GO:GO:0042384 GO:GO:0032391
GO:GO:0035085 EMBL:AL031705 EMBL:Z97652 EMBL:AL031719 EMBL:AL133297
EMBL:Z97633 UniGene:Hs.389438 HGNC:HGNC:29077 ChiTaRS:IFT140
EMBL:AL031720 EMBL:AL080069 IPI:IPI01010093
ProteinModelPortal:Q9UG52 SMR:Q9UG52 STRING:Q9UG52 PRIDE:Q9UG52
Ensembl:ENST00000361339 HOVERGEN:HBG074028 ArrayExpress:Q9UG52
Bgee:Q9UG52 Uniprot:Q9UG52
Length = 656
Score = 118 (46.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 26/41 (63%), Positives = 29/41 (70%)
Query: 43 RLDVACICLGNMRDIQGIWTLRYAQAEPELEARVAALAIHL 83
RLDVA +CLGNM +G LR A+ EPELEARVA LA L
Sbjct: 10 RLDVAKVCLGNMGHARGARALREAEQEPELEARVAVLATQL 50
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.139 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 100 100 0.00091 102 3 11 22 0.45 29
29 0.47 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 541 (58 KB)
Total size of DFA: 112 KB (2075 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.94u 0.08s 10.02t Elapsed: 00:00:08
Total cpu time: 9.94u 0.08s 10.02t Elapsed: 00:00:08
Start: Thu Aug 15 11:14:45 2013 End: Thu Aug 15 11:14:53 2013