Query psy14938
Match_columns 96
No_of_seqs 110 out of 236
Neff 4.8
Searched_HMMs 29240
Date Fri Aug 16 16:17:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14938.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14938hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iu1_A Glycylpeptide N-tetrade 100.0 8.4E-48 2.9E-52 309.5 5.9 96 1-96 243-383 (383)
2 2wuu_A N-myristoyltransferase; 100.0 2.5E-46 8.7E-51 303.5 5.6 96 1-96 282-421 (421)
3 1rxt_A Myristoyl-, glycylpepti 100.0 3.5E-46 1.2E-50 307.2 4.6 96 1-96 356-496 (496)
4 1iyk_A Myristoyl-COA:protein N 100.0 1.5E-44 5.1E-49 291.3 6.8 96 1-96 226-392 (392)
5 4b14_A Glycylpeptide N-tetrade 100.0 7E-45 2.4E-49 292.7 4.6 95 1-95 246-384 (385)
6 1iic_A Peptide N-myristoyltran 100.0 1.3E-44 4.4E-49 293.8 5.8 96 1-96 246-422 (422)
7 3t90_A Glucose-6-phosphate ace 39.5 22 0.00077 21.1 2.6 35 43-77 113-147 (149)
8 2fe7_A Probable N-acetyltransf 35.6 63 0.0022 19.3 4.3 35 43-77 118-155 (166)
9 2vez_A Putative glucosamine 6- 23.7 58 0.002 20.7 2.7 35 43-77 155-189 (190)
10 3fm7_C Dynein intermediate cha 23.1 32 0.0011 17.8 1.0 13 17-29 9-21 (27)
No 1
>3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A*
Probab=100.00 E-value=8.4e-48 Score=309.55 Aligned_cols=96 Identities=66% Similarity=1.229 Sum_probs=93.2
Q ss_pred CcccccceeccChhhheeeeccCCCeEEEEEEecC-Cceeeee-------------------------------------
Q psy14938 1 FFLRFDLAPIFSEEEFKHWFLPRDGIVYTFVVEND-GEITEII------------------------------------- 42 (96)
Q Consensus 1 yl~~f~l~~~fs~eev~Hw~lp~~~Vi~tyVve~~-~~iTDf~------------------------------------- 42 (96)
||+||+++|+||+|||+|||+|+++||||||||++ |+||||+
T Consensus 243 yl~~f~l~~~ft~eev~Hw~lp~~~Vi~syVve~~~g~ITDf~SFY~Lpstvl~~~~~~~l~aAY~fY~~~t~~~l~~Lm 322 (383)
T 3iu1_A 243 YLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLM 322 (383)
T ss_dssp HGGGSSEEEECCHHHHHHHHSCC-CCEEEEEEECTTSCEEEEEEEEECCEEETTCSSCCEECEEEECCCBCSSSCHHHHH
T ss_pred HHHhCCCeeeCCHHHhhhhcccCCCeEEEEEEECCCCcEeeEEEEEEccceecCCCCcceeeeEEEEEEeecCCCHHHHH
Confidence 68999999999999999999999999999999987 9999999
Q ss_pred -------eccCCeEEEeeccccchhccccCcccccceeeeEEEeeccCCCCCCCceEEEcC
Q psy14938 43 -------LKEGFDVFNALDLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGLVLQ 96 (96)
Q Consensus 43 -------k~~gfDVfN~Ld~m~N~~fl~~lkF~~GdG~L~YYLyNw~~~~i~~~~vglvl~ 96 (96)
|+.|||||||||+|+|++||++||||+|||+|||||||||||+|+|++||+|||
T Consensus 323 ~DaLi~Ak~~gfDVFNaL~~m~N~~fL~~lKFg~GdG~L~YYLyNwr~~~~~~~~vglvl~ 383 (383)
T 3iu1_A 323 SDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKVGLVLQ 383 (383)
T ss_dssp HHHHHHHHHTTCSEEEEESCTTGGGTTTTTTCEEEEEEEEEEEESCBCCCBCGGGBCCCCC
T ss_pred HHHHHHHHHcCCeEEEcccccccHHHHHHcCCCCCCCceEEEEeeccCCCCChhHeeEEeC
Confidence 899999999999999999999999999999999999999999999999999997
No 2
>2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A*
Probab=100.00 E-value=2.5e-46 Score=303.51 Aligned_cols=96 Identities=47% Similarity=1.052 Sum_probs=93.9
Q ss_pred CcccccceeccChhhheeeeccCCCeEEEEEEecCCceeeee--------------------------------------
Q psy14938 1 FFLRFDLAPIFSEEEFKHWFLPRDGIVYTFVVENDGEITEII-------------------------------------- 42 (96)
Q Consensus 1 yl~~f~l~~~fs~eev~Hw~lp~~~Vi~tyVve~~~~iTDf~-------------------------------------- 42 (96)
||++|+++|+||+|||+|||+||++||||||||++|+||||+
T Consensus 282 yl~~f~la~~ft~eev~Hw~lp~~~Vi~tYVvE~~g~ITDf~SFY~Lpstvi~~~~~~~l~aAY~fY~~~t~~~l~~Lm~ 361 (421)
T 2wuu_A 282 YLDNFDVGPVFSDAEISHYLLPRDGVVFTYVVENDKKVTDFFSFYRIPSTVIGNSNYNILNAAYVHYYAATSMPLHQLIL 361 (421)
T ss_dssp HHTTSSBEECCCHHHHHHHHSCBTTTEEEEEEEETTEEEEEEEEEEEEEEEC------CEEEEEEEEEEESSSCHHHHHH
T ss_pred HHHhCCceeeCCHHHHHHhccCcCCceEEEEEeCCCcEeeEEEEEEcceeecCCCcchhhhhhhhhhhccCCccHHHHHH
Confidence 689999999999999999999999999999999889999999
Q ss_pred ------eccCCeEEEeeccccchhccccCcccccceeeeEEEeeccCCCCCCCceEEEcC
Q psy14938 43 ------LKEGFDVFNALDLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGLVLQ 96 (96)
Q Consensus 43 ------k~~gfDVfN~Ld~m~N~~fl~~lkF~~GdG~L~YYLyNw~~~~i~~~~vglvl~ 96 (96)
|+.|||||||||+|+|++||++||||+|||+||||||||||++|+|++||+||+
T Consensus 362 DaLi~Ak~~gfDVfNaL~~mdN~~fL~~lKFg~GdG~L~YYlyNwr~~~i~~~~vGlvl~ 421 (421)
T 2wuu_A 362 DLLIVAHSRGFDVCNMVEILDNRSFVEQLKFGAGDGHLRYYFYNWAYPKIKPSQVALVML 421 (421)
T ss_dssp HHHHHHHHTTCCEEEEESCTTGGGGTTTTTCEEEEEEEEEEEESCBCCCCCGGGBCCCCC
T ss_pred HHHHHHHHcCCcEEecccccccHHHHHhCCCCCCCCceEEEEEecCCCCCCccceeEEeC
Confidence 889999999999999999999999999999999999999999999999999985
No 3
>1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta structure, unique N-myristoyltransferase fold; 3.00A {Homo sapiens} SCOP: d.108.1.2 d.108.1.2
Probab=100.00 E-value=3.5e-46 Score=307.16 Aligned_cols=96 Identities=65% Similarity=1.225 Sum_probs=93.7
Q ss_pred CcccccceeccChhhheeeeccCCCeEEEEEEecC-Cceeeee-------------------------------------
Q psy14938 1 FFLRFDLAPIFSEEEFKHWFLPRDGIVYTFVVEND-GEITEII------------------------------------- 42 (96)
Q Consensus 1 yl~~f~l~~~fs~eev~Hw~lp~~~Vi~tyVve~~-~~iTDf~------------------------------------- 42 (96)
||+||+++|+||+|||+|||+|+++||||||||++ |+||||+
T Consensus 356 Yl~~f~la~~fseeev~Hwflp~e~Vi~sYVvE~~~g~ITDF~SFY~Lpstvi~~~kh~~l~aAYsfY~v~t~~~l~~Lm 435 (496)
T 1rxt_A 356 YLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLM 435 (496)
T ss_dssp HSTTSSBCCCCCTTTTTTSSSCCSSSEEEEEECCSSSCCCCEEEEECCCBCCCSCSSCCCCCBCCCCCEECSSSCTTTHH
T ss_pred HHHhCCceeeCCHHHHHHhcccCCCceEEEEEECCCCcEeeEEEEEEcceeecCCCcchhhhhhhhhhhccCCccHHHHH
Confidence 78999999999999999999999999999999987 8999999
Q ss_pred -------eccCCeEEEeeccccchhccccCcccccceeeeEEEeeccCCCCCCCceEEEcC
Q psy14938 43 -------LKEGFDVFNALDLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGLVLQ 96 (96)
Q Consensus 43 -------k~~gfDVfN~Ld~m~N~~fl~~lkF~~GdG~L~YYLyNw~~~~i~~~~vglvl~ 96 (96)
|+.|||||||||+|+|+.||++||||+|||+||||||||||++|+|++|||||+
T Consensus 436 ~DALilAK~~gfDVFNaLd~m~N~~fL~~LKFg~GdG~L~YYLyNwr~~~i~~~~vGlVl~ 496 (496)
T 1rxt_A 436 SDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKVGIVLQ 496 (496)
T ss_dssp HHHHHHHHHTTCSBCCCCCCTTHHHHTTTSSCCCCSCCCEEEESSCCCCCCCTTTBCCCCC
T ss_pred HHHHHHHHHcCCCEEecccccccHHHHHHCCCCCCCCceeEEEeeccCCCCCCcceeEEeC
Confidence 889999999999999999999999999999999999999999999999999985
No 4
>1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A
Probab=100.00 E-value=1.5e-44 Score=291.32 Aligned_cols=96 Identities=48% Similarity=0.845 Sum_probs=92.7
Q ss_pred CcccccceeccChhhheeeeccCCC-----eEEEEEEecC-Cceeeee--------------------------------
Q psy14938 1 FFLRFDLAPIFSEEEFKHWFLPRDG-----IVYTFVVEND-GEITEII-------------------------------- 42 (96)
Q Consensus 1 yl~~f~l~~~fs~eev~Hw~lp~~~-----Vi~tyVve~~-~~iTDf~-------------------------------- 42 (96)
||+||+++|+||+|||+|||+|+++ ||||||||++ |+||||+
T Consensus 226 yl~~f~l~~~f~~eev~Hw~lp~~~~~~~~Vi~tYVve~~~g~ITDf~SFY~Lpstv~~~~~~~~l~aAY~fY~~~~~~~ 305 (392)
T 1iyk_A 226 YQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNAQHDELGIAYLFYYASDSFE 305 (392)
T ss_dssp HHTTSSEEEECCHHHHHHHHHCSCSSSCCSSEEEEEEECTTSCEEEEEEEEECCEEESSCSSCSEECEEEEEEEEETTTT
T ss_pred HHHhCCceeeCCHHHHHHHcccCCCCCCCceEEEEEEECCCCcEeeEEEEEECcccccCCCccchhhhhhhhhccccccc
Confidence 6899999999999999999999999 9999999976 9999999
Q ss_pred -------------------eccCCeEEEeeccccchhccccCcccccceeeeEEEeeccCCC----CCCCc---------
Q psy14938 43 -------------------LKEGFDVFNALDLMENKEFLGPLKFGIGDGNLQYYLYNWKCPS----IPPNK--------- 90 (96)
Q Consensus 43 -------------------k~~gfDVfN~Ld~m~N~~fl~~lkF~~GdG~L~YYLyNw~~~~----i~~~~--------- 90 (96)
|+.|||||||||+|+|+.||++||||+|||+||||||||||++ |+|++
T Consensus 306 ~~~l~~~l~~Lm~DaLi~Ak~~~fDVFNaL~~mdN~~fL~~lKFg~GdG~L~YYLyN~r~~~~~g~~~~~~~~~~~~~~~ 385 (392)
T 1iyk_A 306 KPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDGFLNYYLFNYRTFPMDGGIDKKTKEVVEDQTS 385 (392)
T ss_dssp STTHHHHHHHHHHHHHHHHGGGTCSEEEEESCTTGGGTTTTTTCEEEEEEEEEEEETCBCCCCCCSBCTTTCCBCTTCCC
T ss_pred cccccchHHHHHHHHHHHHHHcCCcEEecccccccHHHHHHCCCCCCCCceeEEEeecCCCccccccCcccccccccccc
Confidence 8899999999999999999999999999999999999999999 89999
Q ss_pred -eEEEcC
Q psy14938 91 -IGLVLQ 96 (96)
Q Consensus 91 -vglvl~ 96 (96)
||+||+
T Consensus 386 ~vG~vl~ 392 (392)
T 1iyk_A 386 GIGVVLL 392 (392)
T ss_dssp SEECCCC
T ss_pred ceeEEeC
Confidence 999985
No 5
>4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A*
Probab=100.00 E-value=7e-45 Score=292.74 Aligned_cols=95 Identities=51% Similarity=1.102 Sum_probs=93.0
Q ss_pred CcccccceeccChhhheeeeccCCCeEEEEEEecCCceeeee--------------------------------------
Q psy14938 1 FFLRFDLAPIFSEEEFKHWFLPRDGIVYTFVVENDGEITEII-------------------------------------- 42 (96)
Q Consensus 1 yl~~f~l~~~fs~eev~Hw~lp~~~Vi~tyVve~~~~iTDf~-------------------------------------- 42 (96)
|++||+++|+||+|||+|||+|++|||||||+|++|+||||+
T Consensus 246 yl~~f~l~~~f~~ee~~Hw~lp~~~Vi~syVve~~~~itdf~SFY~lps~vi~~~k~~~l~~AY~fY~~~~~~~l~~l~~ 325 (385)
T 4b14_A 246 YLEQFNLYAVFTKEEIAHWFLPIENVIYTYVNEENGKIKDMISFYSLPSQILGNDKYSTLNAAYSFYNVTTTATFKQLMQ 325 (385)
T ss_dssp HHTTSSEEECCCHHHHHHHHSCBTTTEEEEEEEETTEEEEEEEEEECCEEESSCSSCSEECEEEECCCEESSSCHHHHHH
T ss_pred HHhcCCeeEecCHHHeeeeeecCCCeEEEEEECCCCcEeEEEEEEEcceeeeCCCCcceeeeEeEEEeeecCccHHHHHH
Confidence 689999999999999999999999999999999889999998
Q ss_pred ------eccCCeEEEeeccccchhccccCcccccceeeeEEEeeccCCCCCCCceEEEc
Q psy14938 43 ------LKEGFDVFNALDLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGLVL 95 (96)
Q Consensus 43 ------k~~gfDVfN~Ld~m~N~~fl~~lkF~~GdG~L~YYLyNw~~~~i~~~~vglvl 95 (96)
|+.|||||||||+|+|+.||++|||++|||+||||||||||++|+|++||+||
T Consensus 326 dali~ak~~~fDVfnaL~~~~N~~fl~~lkF~~GdG~L~YYLyNw~~~~i~~~~iglvl 384 (385)
T 4b14_A 326 DAILLAKRNNFDVFNALEVMQNKSVFEDLKFGEGDGSLKYYLYNWKCASFAPAHVGIVL 384 (385)
T ss_dssp HHHHHHHHTTCSEEEEESCTTGGGGTTTTTCEEEEEEEEEEEESCEECCCCGGGBCCCC
T ss_pred HHHHHHHHCCCCEEEeccccchHHHHHHcCCCCCCCcEEEEEEecCCCCCCccceEEEe
Confidence 88999999999999999999999999999999999999999999999999997
No 6
>1iic_A Peptide N-myristoyltransferase; HET: MYA; 2.20A {Saccharomyces cerevisiae} SCOP: d.108.1.2 d.108.1.2 PDB: 1iid_A* 2nmt_A* 2p6e_A* 2p6f_A* 2p6g_A*
Probab=100.00 E-value=1.3e-44 Score=293.77 Aligned_cols=96 Identities=40% Similarity=0.815 Sum_probs=92.6
Q ss_pred CcccccceeccChhhheeeeccCCC------eEEEEEEecC-Cceeeee-------------------------------
Q psy14938 1 FFLRFDLAPIFSEEEFKHWFLPRDG------IVYTFVVEND-GEITEII------------------------------- 42 (96)
Q Consensus 1 yl~~f~l~~~fs~eev~Hw~lp~~~------Vi~tyVve~~-~~iTDf~------------------------------- 42 (96)
||+||+++|+||+|||+|||+|+++ ||||||||++ |+||||+
T Consensus 246 yl~~f~l~~~ft~eev~Hwflp~~~~~~~~~Vi~tYVvE~~~g~ITDf~SFY~Lpstv~~~~kh~~l~aAY~fY~~~t~~ 325 (422)
T 1iic_A 246 YQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDAD 325 (422)
T ss_dssp HHTTSSEEECCCHHHHHHHHSCCTTCCGGGCCEEEEEEECTTSCEEEEEEEEECCEEECSCSSCSEECEEEEEEEEECTT
T ss_pred HHHhCCCeeeCCHHHHHHHccCCCCCCCCCceEEEEEEECCCCcEeeEEEEEEccccccCCCccchhhhhhhhhheeccc
Confidence 6899999999999999999999999 9999999976 9999999
Q ss_pred ------------------------------eccCCeEEEeeccccchhccccCcccccceeeeEEEeeccCCC----CC-
Q psy14938 43 ------------------------------LKEGFDVFNALDLMENKEFLGPLKFGIGDGNLQYYLYNWKCPS----IP- 87 (96)
Q Consensus 43 ------------------------------k~~gfDVfN~Ld~m~N~~fl~~lkF~~GdG~L~YYLyNw~~~~----i~- 87 (96)
|+.|||||||||+|+|+.||++||||+|||+||||||||||++ |+
T Consensus 326 ~~~~~~~~~~~~~~l~~~l~~Lm~DaLi~Ak~~~fDVFNaL~~mdN~~fL~~lKFg~GdG~L~YYLyN~r~~~~~g~~~~ 405 (422)
T 1iic_A 326 FQFKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFNYRAKPITGGLNP 405 (422)
T ss_dssp TTSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCTTGGGTTTTTTCEEEEEEEEEEEETEECCCCCBSBCT
T ss_pred ccccccccchhhhhhhhhHHHHHHHHHHHHHHcCCCEEecccccccHHHHHhCCCCCCCCceEEEEEecCCCCccccccc
Confidence 7789999999999999999999999999999999999999998 89
Q ss_pred --------CCceEEEcC
Q psy14938 88 --------PNKIGLVLQ 96 (96)
Q Consensus 88 --------~~~vglvl~ 96 (96)
|++||+||+
T Consensus 406 ~~~~~~~~~~~vG~vl~ 422 (422)
T 1iic_A 406 DNSNDIKRRSNVGVVML 422 (422)
T ss_dssp TSSBCTTTCBCBCCCCC
T ss_pred cccccccCCCcceEEeC
Confidence 999999985
No 7
>3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana}
Probab=39.46 E-value=22 Score=21.09 Aligned_cols=35 Identities=17% Similarity=0.011 Sum_probs=24.1
Q ss_pred eccCCeEEEeeccccchhccccCcccccceeeeEE
Q psy14938 43 LKEGFDVFNALDLMENKEFLGPLKFGIGDGNLQYY 77 (96)
Q Consensus 43 k~~gfDVfN~Ld~m~N~~fl~~lkF~~GdG~L~YY 77 (96)
++.|+...-+-..-+|..|.+++.|.+-.-...+|
T Consensus 113 ~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~~~~~ 147 (149)
T 3t90_A 113 KSMGCYKVILDCSVENKVFYEKCGMSNKSIQMSKY 147 (149)
T ss_dssp HHTTCSEEECCCCGGGHHHHHTTTCCCCCCCCCCC
T ss_pred HHCCCeEEEEeccccHHHHHHHCCCeeccceeeee
Confidence 56687776665556788889999888655544433
No 8
>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1
Probab=35.61 E-value=63 Score=19.29 Aligned_cols=35 Identities=14% Similarity=0.030 Sum_probs=22.8
Q ss_pred eccCCeEEEeeccccchh---ccccCcccccceeeeEE
Q psy14938 43 LKEGFDVFNALDLMENKE---FLGPLKFGIGDGNLQYY 77 (96)
Q Consensus 43 k~~gfDVfN~Ld~m~N~~---fl~~lkF~~GdG~L~YY 77 (96)
++.|+...-+-..-+|.. |.+++.|.+-.....|+
T Consensus 118 ~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~~ 155 (166)
T 2fe7_A 118 VANDCGRLEWSVLDWNQPAIDFYRSIGALPQDEWVRYR 155 (166)
T ss_dssp HHTTCSEEEEEEETTCHHHHHHHHHTTCEECTTEEEEE
T ss_pred HHCCCCEEEEEEccCCHHHHHHHHHcCCeEcccEEEEE
Confidence 556777776655556643 78888888755544444
No 9
>2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A*
Probab=23.67 E-value=58 Score=20.71 Aligned_cols=35 Identities=17% Similarity=-0.049 Sum_probs=23.1
Q ss_pred eccCCeEEEeeccccchhccccCcccccceeeeEE
Q psy14938 43 LKEGFDVFNALDLMENKEFLGPLKFGIGDGNLQYY 77 (96)
Q Consensus 43 k~~gfDVfN~Ld~m~N~~fl~~lkF~~GdG~L~YY 77 (96)
++.|+...-+-..-+|..|.+++.|..-.-...+|
T Consensus 155 ~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~~~~~ 189 (190)
T 2vez_A 155 EKVGCYKTILDCSEANEGFYIKCGFKRAGLEMAHY 189 (190)
T ss_dssp HHHTCSEEECCCCGGGHHHHHHTTCCCCCCCCCCC
T ss_pred HHcCCeEEEEEeccchHHHHHHCCCeehHHhHhhc
Confidence 55677766655556777888888887655444443
No 10
>3fm7_C Dynein intermediate chain, cytosolic; cytoplasmic dynein, light chain tctex-1, tctex, light chain intermediate chain; 3.50A {Drosophila melanogaster}
Probab=23.14 E-value=32 Score=17.83 Aligned_cols=13 Identities=31% Similarity=0.585 Sum_probs=10.1
Q ss_pred eeeeccCCCeEEE
Q psy14938 17 KHWFLPRDGIVYT 29 (96)
Q Consensus 17 ~Hw~lp~~~Vi~t 29 (96)
.+-|.|+|.|.||
T Consensus 9 ~~nipPkE~V~Ys 21 (27)
T 3fm7_C 9 ATNIPPKETLVYT 21 (27)
T ss_dssp CCEECCCCCCCEE
T ss_pred EeccCCcceeEEe
Confidence 3467899999887
Done!