Query psy14941
Match_columns 513
No_of_seqs 240 out of 2449
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 16:23:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14941.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14941hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2E-50 6.8E-55 416.2 16.7 395 26-441 8-458 (482)
2 2vch_A Hydroquinone glucosyltr 100.0 1.7E-48 5.7E-53 400.4 29.1 393 27-469 7-477 (480)
3 3hbf_A Flavonoid 3-O-glucosylt 100.0 5.8E-48 2E-52 389.7 28.9 375 25-442 12-434 (454)
4 1iir_A Glycosyltransferase GTF 100.0 7.7E-46 2.6E-50 376.1 30.1 398 27-467 1-408 (415)
5 2c1x_A UDP-glucose flavonoid 3 100.0 4.7E-45 1.6E-49 372.4 32.4 389 26-457 7-450 (456)
6 1rrv_A Glycosyltransferase GTF 100.0 7.5E-45 2.6E-49 369.1 27.4 396 27-466 1-408 (416)
7 2acv_A Triterpene UDP-glucosyl 100.0 8.1E-45 2.8E-49 371.7 26.9 370 25-441 8-442 (463)
8 2iya_A OLEI, oleandomycin glyc 100.0 1.3E-41 4.3E-46 346.3 30.8 396 26-462 12-424 (424)
9 4amg_A Snogd; transferase, pol 100.0 9.4E-42 3.2E-46 344.6 23.5 367 24-458 20-399 (400)
10 3h4t_A Glycosyltransferase GTF 100.0 1.5E-40 5E-45 335.8 29.9 375 27-461 1-384 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 6.1E-38 2.1E-42 318.3 29.6 379 27-459 21-413 (415)
12 2p6p_A Glycosyl transferase; X 100.0 1.5E-37 5.1E-42 312.1 24.4 365 27-460 1-380 (384)
13 3ia7_A CALG4; glycosysltransfe 100.0 8.3E-37 2.8E-41 308.5 28.5 378 27-460 5-399 (402)
14 2yjn_A ERYCIII, glycosyltransf 100.0 2E-37 7E-42 316.7 22.5 393 24-461 18-437 (441)
15 2iyf_A OLED, oleandomycin glyc 100.0 8.8E-36 3E-40 303.8 27.6 381 27-460 8-400 (430)
16 4fzr_A SSFS6; structural genom 100.0 2.2E-34 7.5E-39 290.4 21.0 367 24-456 13-397 (398)
17 3tsa_A SPNG, NDP-rhamnosyltran 100.0 5E-33 1.7E-37 279.8 21.5 367 27-460 2-389 (391)
18 3oti_A CALG3; calicheamicin, T 100.0 3.1E-33 1.1E-37 282.0 18.4 357 26-459 20-397 (398)
19 3otg_A CALG1; calicheamicin, T 100.0 1.1E-30 3.8E-35 264.5 21.8 374 25-460 19-409 (412)
20 2o6l_A UDP-glucuronosyltransfe 100.0 3.1E-29 1.1E-33 221.4 18.6 165 273-441 4-170 (170)
21 3s2u_A UDP-N-acetylglucosamine 100.0 1.2E-27 4.2E-32 237.4 23.7 333 27-459 3-356 (365)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 1.2E-19 4.2E-24 180.1 23.1 334 27-462 7-358 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 4.4E-14 1.5E-18 133.0 17.1 133 262-408 132-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.5 6.6E-15 2.2E-19 132.9 7.8 125 288-423 27-196 (224)
25 3c48_A Predicted glycosyltrans 99.3 1.1E-09 3.8E-14 110.9 26.4 167 280-462 233-430 (438)
26 2gek_A Phosphatidylinositol ma 99.3 2.8E-10 9.7E-15 113.9 21.3 149 290-454 208-377 (406)
27 3okp_A GDP-mannose-dependent a 99.3 3.3E-10 1.1E-14 112.9 21.0 331 25-459 3-377 (394)
28 2iw1_A Lipopolysaccharide core 99.3 5E-10 1.7E-14 110.8 21.9 164 279-455 185-369 (374)
29 2x6q_A Trehalose-synthase TRET 99.2 4.3E-09 1.5E-13 105.8 27.5 135 288-438 229-392 (416)
30 1v4v_A UDP-N-acetylglucosamine 99.2 1.8E-10 6.2E-15 114.3 16.0 155 288-461 197-368 (376)
31 1vgv_A UDP-N-acetylglucosamine 99.2 1.6E-10 5.4E-15 115.0 15.4 158 288-463 204-378 (384)
32 3fro_A GLGA glycogen synthase; 99.2 4.2E-09 1.4E-13 106.4 24.9 151 291-459 252-428 (439)
33 2r60_A Glycosyl transferase, g 99.2 6.6E-09 2.3E-13 107.2 26.4 134 288-436 260-435 (499)
34 2jjm_A Glycosyl transferase, g 99.1 1.7E-09 6E-14 107.9 18.6 146 278-438 199-363 (394)
35 2iuy_A Avigt4, glycosyltransfe 99.1 4.5E-10 1.5E-14 109.9 13.1 127 292-436 164-315 (342)
36 3ot5_A UDP-N-acetylglucosamine 99.0 1.2E-09 4E-14 109.2 11.6 155 288-460 223-394 (403)
37 3dzc_A UDP-N-acetylglucosamine 99.0 3.2E-09 1.1E-13 105.9 11.9 150 288-455 229-395 (396)
38 3oy2_A Glycosyltransferase B73 98.9 5E-08 1.7E-12 97.9 20.3 151 289-455 183-385 (413)
39 3beo_A UDP-N-acetylglucosamine 98.9 2.1E-08 7.3E-13 99.1 17.3 154 288-458 204-373 (375)
40 4hwg_A UDP-N-acetylglucosamine 98.8 1.3E-08 4.4E-13 100.8 8.9 155 288-458 202-374 (385)
41 1rzu_A Glycogen synthase 1; gl 98.7 9.4E-07 3.2E-11 90.5 21.6 146 290-454 291-469 (485)
42 3s28_A Sucrose synthase 1; gly 98.7 2.1E-07 7.2E-12 100.0 17.0 155 288-455 570-764 (816)
43 2qzs_A Glycogen synthase; glyc 98.7 9.8E-07 3.3E-11 90.4 21.2 148 289-455 291-471 (485)
44 2f9f_A First mannosyl transfer 98.6 8.6E-08 2.9E-12 84.0 8.5 134 289-437 22-175 (177)
45 2hy7_A Glucuronosyltransferase 98.3 0.0001 3.5E-09 73.4 23.8 159 238-427 176-354 (406)
46 3vue_A GBSS-I, granule-bound s 98.0 0.00016 5.4E-09 74.7 17.8 124 288-424 325-475 (536)
47 3qhp_A Type 1 capsular polysac 97.8 5.1E-05 1.8E-09 65.1 7.7 131 290-437 2-152 (166)
48 2vsy_A XCC0866; transferase, g 97.8 0.00044 1.5E-08 72.1 15.9 159 289-458 376-556 (568)
49 4gyw_A UDP-N-acetylglucosamine 97.7 0.0004 1.4E-08 74.2 14.7 165 288-459 521-703 (723)
50 2bfw_A GLGA glycogen synthase; 97.6 0.00091 3.1E-08 59.0 12.6 87 341-436 96-192 (200)
51 2xci_A KDO-transferase, 3-deox 97.5 7.6E-05 2.6E-09 73.5 5.3 92 340-438 260-358 (374)
52 3q3e_A HMW1C-like glycosyltran 97.5 0.00092 3.2E-08 68.7 12.8 138 290-435 441-598 (631)
53 3rhz_A GTF3, nucleotide sugar 97.1 0.00087 3E-08 64.7 7.9 130 289-442 177-323 (339)
54 2x0d_A WSAF; GT4 family, trans 96.6 0.0029 1E-07 62.9 6.7 84 339-431 294-385 (413)
55 3tov_A Glycosyl transferase fa 96.6 0.083 2.8E-06 51.0 16.8 132 288-424 184-345 (349)
56 1psw_A ADP-heptose LPS heptosy 95.1 0.67 2.3E-05 44.3 16.3 93 288-384 179-286 (348)
57 3nb0_A Glycogen [starch] synth 88.6 1.6 5.5E-05 45.4 9.4 91 343-439 496-613 (725)
58 3ug7_A Arsenical pump-driving 86.6 3.8 0.00013 39.2 10.4 43 24-66 23-65 (349)
59 2x0d_A WSAF; GT4 family, trans 84.3 0.41 1.4E-05 47.3 2.4 42 24-65 44-89 (413)
60 3iqw_A Tail-anchored protein t 83.3 2.9 0.0001 39.7 7.7 42 25-66 14-55 (334)
61 3io3_A DEHA2D07832P; chaperone 80.8 3.3 0.00011 39.5 7.2 42 24-65 15-58 (348)
62 1uqt_A Alpha, alpha-trehalose- 80.7 18 0.00062 36.1 12.9 90 342-442 333-438 (482)
63 2iz6_A Molybdenum cofactor car 79.2 28 0.00095 29.4 14.4 147 260-424 14-172 (176)
64 2wqk_A 5'-nucleotidase SURE; S 76.1 18 0.00061 32.6 10.1 25 42-67 15-39 (251)
65 2gt1_A Lipopolysaccharide hept 76.0 2.4 8.3E-05 39.9 4.6 126 288-424 177-320 (326)
66 1rcu_A Conserved hypothetical 69.0 42 0.0014 28.8 10.3 97 278-386 48-150 (195)
67 3dfz_A SIRC, precorrin-2 dehyd 68.5 14 0.00049 32.5 7.5 150 288-453 31-197 (223)
68 4gi5_A Quinone reductase; prot 66.3 7.3 0.00025 35.8 5.3 41 23-63 19-61 (280)
69 2i2c_A Probable inorganic poly 66.2 3 0.0001 38.3 2.6 52 357-424 34-91 (272)
70 1kjn_A MTH0777; hypotethical p 62.0 15 0.00051 29.8 5.5 41 25-65 5-46 (157)
71 2hy5_A Putative sulfurtransfer 58.1 16 0.00054 29.0 5.3 38 28-65 2-42 (130)
72 3mc3_A DSRE/DSRF-like family p 56.6 14 0.00047 29.6 4.7 40 26-65 15-56 (134)
73 1jx7_A Hypothetical protein YC 56.6 14 0.00049 28.3 4.8 38 28-65 3-44 (117)
74 3t5t_A Putative glycosyltransf 56.3 58 0.002 32.5 10.1 94 341-442 353-457 (496)
75 1yt5_A Inorganic polyphosphate 55.6 5.6 0.00019 36.1 2.4 52 357-424 40-94 (258)
76 2zxe_G FXYD10, phospholemman-l 54.0 9.6 0.00033 26.5 2.7 37 475-511 13-50 (74)
77 2jo1_A Phospholemman; FXYD1, N 53.2 11 0.00038 25.9 2.9 20 475-494 10-29 (72)
78 3tem_A Ribosyldihydronicotinam 51.6 17 0.00058 32.2 4.9 40 26-65 1-42 (228)
79 2jp3_A FXYD domain-containing 49.9 18 0.00062 24.6 3.5 23 475-497 11-33 (67)
80 3l7i_A Teichoic acid biosynthe 48.9 12 0.00042 39.6 4.1 112 339-459 597-719 (729)
81 3lqk_A Dipicolinate synthase s 48.2 12 0.00042 32.4 3.3 42 25-68 6-48 (201)
82 2d1p_B TUSC, hypothetical UPF0 47.3 24 0.00081 27.4 4.6 38 28-65 3-42 (119)
83 2d1p_A TUSD, hypothetical UPF0 46.3 32 0.0011 27.7 5.4 39 26-64 12-53 (140)
84 3tqq_A Methionyl-tRNA formyltr 45.5 20 0.00069 33.5 4.6 35 26-66 2-36 (314)
85 2amj_A Modulator of drug activ 45.1 20 0.0007 30.9 4.3 40 25-64 11-56 (204)
86 4b4o_A Epimerase family protei 44.3 23 0.00078 32.4 4.8 32 27-63 1-32 (298)
87 3f2v_A General stress protein 44.2 15 0.00052 31.5 3.3 38 27-64 2-39 (192)
88 3qvl_A Putative hydantoin race 42.8 25 0.00087 31.4 4.6 39 26-64 1-39 (245)
89 2i2x_B MTAC, methyltransferase 42.5 27 0.00093 31.5 4.9 39 25-64 122-160 (258)
90 3fwy_A Light-independent proto 41.9 43 0.0015 31.2 6.3 43 24-66 45-87 (314)
91 3trh_A Phosphoribosylaminoimid 41.4 1.5E+02 0.0052 24.5 9.6 140 288-442 5-157 (169)
92 3lp6_A Phosphoribosylaminoimid 41.3 1.5E+02 0.0053 24.6 8.9 139 288-442 6-156 (174)
93 3zqu_A Probable aromatic acid 41.3 33 0.0011 29.8 4.9 39 26-66 4-42 (209)
94 1ccw_A Protein (glutamate muta 41.1 29 0.001 27.7 4.4 38 26-64 3-40 (137)
95 3rg8_A Phosphoribosylaminoimid 40.9 1.2E+02 0.0041 24.9 7.9 136 290-441 3-148 (159)
96 3jy6_A Transcriptional regulat 40.0 84 0.0029 27.9 8.0 40 24-63 5-45 (276)
97 3qjg_A Epidermin biosynthesis 39.7 16 0.00054 30.9 2.5 39 27-67 6-44 (175)
98 3q0i_A Methionyl-tRNA formyltr 39.5 41 0.0014 31.4 5.7 35 26-66 7-41 (318)
99 1eiw_A Hypothetical protein MT 38.7 26 0.00088 27.0 3.4 63 357-424 37-108 (111)
100 2an1_A Putative kinase; struct 38.1 14 0.00048 34.1 2.2 30 357-386 62-95 (292)
101 1pjq_A CYSG, siroheme synthase 37.5 1.2E+02 0.0041 29.9 9.0 139 288-442 12-168 (457)
102 2r8r_A Sensor protein; KDPD, P 37.2 46 0.0016 29.3 5.2 38 27-65 7-44 (228)
103 2hy6_A General control protein 36.9 51 0.0018 19.0 3.5 28 414-441 4-33 (34)
104 3pfn_A NAD kinase; structural 36.3 16 0.00055 34.9 2.3 52 357-424 107-162 (365)
105 3u7q_B Nitrogenase molybdenum- 36.0 79 0.0027 31.8 7.5 36 23-64 361-396 (523)
106 1y80_A Predicted cobalamin bin 35.8 24 0.00081 30.6 3.2 38 25-63 87-124 (210)
107 2oxj_A Hybrid alpha/beta pepti 35.7 57 0.0019 18.8 3.5 28 414-441 4-33 (34)
108 3mcu_A Dipicolinate synthase, 35.6 25 0.00085 30.6 3.2 41 25-67 4-45 (207)
109 1ydh_A AT5G11950; structural g 35.3 2.2E+02 0.0075 24.6 11.0 131 278-423 31-187 (216)
110 2hy5_B Intracellular sulfur ox 35.3 41 0.0014 26.9 4.3 38 28-65 7-46 (136)
111 2woo_A ATPase GET3; tail-ancho 35.1 47 0.0016 31.1 5.4 43 24-66 16-58 (329)
112 3afo_A NADH kinase POS5; alpha 34.8 17 0.00059 35.1 2.3 52 357-424 113-169 (388)
113 1u0t_A Inorganic polyphosphate 34.8 13 0.00044 34.7 1.4 52 357-424 74-129 (307)
114 3f6r_A Flavodoxin; FMN binding 34.7 37 0.0013 27.2 4.1 37 28-65 3-40 (148)
115 2afh_E Nitrogenase iron protei 33.9 63 0.0021 29.3 6.0 40 27-66 2-41 (289)
116 3end_A Light-independent proto 33.6 51 0.0017 30.3 5.4 42 25-66 39-80 (307)
117 3zq6_A Putative arsenical pump 33.1 52 0.0018 30.6 5.4 43 24-66 10-53 (324)
118 2ejb_A Probable aromatic acid 33.0 46 0.0016 28.4 4.5 37 27-65 2-38 (189)
119 2qs7_A Uncharacterized protein 32.8 42 0.0014 27.1 4.0 39 27-65 8-46 (144)
120 2yxb_A Coenzyme B12-dependent 32.7 20 0.0007 29.6 2.2 40 24-64 16-55 (161)
121 1fmt_A Methionyl-tRNA FMet for 32.7 44 0.0015 31.1 4.7 35 25-65 2-36 (314)
122 2lnd_A De novo designed protei 32.6 42 0.0014 23.6 3.3 48 376-424 49-99 (112)
123 3egc_A Putative ribose operon 32.2 1.2E+02 0.004 27.2 7.6 40 24-63 6-46 (291)
124 1sbz_A Probable aromatic acid 32.2 48 0.0017 28.4 4.5 36 28-65 2-38 (197)
125 1p3y_1 MRSD protein; flavoprot 32.1 20 0.00067 30.9 2.0 39 25-65 7-45 (194)
126 3rfo_A Methionyl-tRNA formyltr 32.0 41 0.0014 31.4 4.3 35 27-67 5-39 (317)
127 3gv0_A Transcriptional regulat 31.9 1.4E+02 0.0047 26.7 8.0 39 25-63 7-48 (288)
128 2vqe_B 30S ribosomal protein S 31.6 1.9E+02 0.0065 25.8 8.4 37 131-167 157-194 (256)
129 2kpo_A Rossmann 2X2 fold prote 30.8 57 0.002 22.9 3.7 64 397-463 22-102 (110)
130 4gud_A Imidazole glycerol phos 30.8 43 0.0015 28.8 4.1 30 289-327 3-32 (211)
131 3dff_A Teicoplanin pseudoaglyc 30.5 53 0.0018 29.8 4.7 40 25-65 6-45 (273)
132 3c3g_A Alpha/beta peptide with 30.5 68 0.0023 18.3 3.3 28 414-441 3-32 (33)
133 2qxy_A Response regulator; reg 30.3 1.8E+02 0.0062 22.2 7.8 105 305-428 12-124 (142)
134 3l6u_A ABC-type sugar transpor 30.3 1.3E+02 0.0045 26.8 7.6 39 25-63 7-46 (293)
135 1wek_A Hypothetical protein TT 30.3 1.2E+02 0.0041 26.3 6.8 115 260-385 38-169 (217)
136 3evn_A Oxidoreductase, GFO/IDH 30.2 3.1E+02 0.011 25.1 10.4 105 290-406 7-123 (329)
137 3c1a_A Putative oxidoreductase 30.2 2.6E+02 0.0088 25.5 9.7 104 289-406 11-125 (315)
138 2fb6_A Conserved hypothetical 30.1 33 0.0011 26.6 2.9 39 27-65 8-49 (117)
139 1qkk_A DCTD, C4-dicarboxylate 30.0 1.5E+02 0.005 23.3 7.1 56 377-434 74-130 (155)
140 4dzz_A Plasmid partitioning pr 29.8 74 0.0025 26.8 5.5 38 28-65 2-40 (206)
141 3o74_A Fructose transport syst 29.7 1.4E+02 0.0047 26.2 7.6 38 26-63 2-40 (272)
142 3fni_A Putative diflavin flavo 29.4 77 0.0026 25.8 5.2 37 27-64 5-42 (159)
143 3dfi_A Pseudoaglycone deacetyl 29.4 61 0.0021 29.3 5.0 40 25-65 6-45 (270)
144 2hac_A T-cell surface glycopro 29.3 71 0.0024 18.3 3.2 18 479-496 6-23 (33)
145 2x5n_A SPRPN10, 26S proteasome 29.3 62 0.0021 27.5 4.7 39 26-64 106-144 (192)
146 1fy2_A Aspartyl dipeptidase; s 29.0 50 0.0017 29.0 4.2 86 277-385 21-120 (229)
147 3bbl_A Regulatory protein of L 28.9 3E+02 0.01 24.3 9.9 37 26-62 4-45 (287)
148 2l8s_A Integrin alpha-1; trans 28.8 75 0.0026 20.7 3.8 20 481-500 14-33 (54)
149 1qgu_B Protein (nitrogenase mo 28.7 1.5E+02 0.005 29.8 8.1 37 23-65 357-393 (519)
150 1g63_A Epidermin modifying enz 28.4 31 0.0011 29.2 2.6 39 27-67 3-41 (181)
151 2gk4_A Conserved hypothetical 28.3 36 0.0012 30.1 3.1 23 43-65 31-53 (232)
152 1kyq_A Met8P, siroheme biosynt 27.9 3.4E+02 0.012 24.5 9.9 101 358-462 106-232 (274)
153 2ixd_A LMBE-related protein; h 27.8 67 0.0023 28.5 4.8 40 25-65 2-41 (242)
154 1pja_A Palmitoyl-protein thioe 27.8 35 0.0012 30.9 3.1 34 27-62 37-72 (302)
155 3rpe_A MDAB, modulator of drug 27.5 76 0.0026 27.7 5.0 38 27-64 26-69 (218)
156 3miz_A Putative transcriptiona 27.5 69 0.0024 29.0 5.1 40 24-63 11-52 (301)
157 3uug_A Multiple sugar-binding 27.4 1.4E+02 0.005 27.1 7.5 39 25-63 2-41 (330)
158 3m9w_A D-xylose-binding peripl 27.4 1.5E+02 0.005 26.9 7.5 37 27-63 3-40 (313)
159 3c3f_A Alpha/beta peptide with 27.4 82 0.0028 18.1 3.3 28 414-441 4-33 (34)
160 1cp2_A CP2, nitrogenase iron p 27.3 88 0.003 27.8 5.8 39 28-66 2-40 (269)
161 3ezx_A MMCP 1, monomethylamine 27.1 40 0.0014 29.4 3.1 39 25-64 91-129 (215)
162 3hly_A Flavodoxin-like domain; 27.1 86 0.0029 25.6 5.1 35 28-63 2-37 (161)
163 3g1w_A Sugar ABC transporter; 27.1 1.1E+02 0.0038 27.5 6.5 39 24-62 2-41 (305)
164 2a5l_A Trp repressor binding p 26.7 65 0.0022 27.2 4.5 36 27-63 6-42 (200)
165 1f4p_A Flavodoxin; electron tr 26.4 52 0.0018 26.2 3.6 36 28-64 2-38 (147)
166 1id1_A Putative potassium chan 25.8 38 0.0013 27.4 2.6 33 26-64 3-35 (153)
167 3k4h_A Putative transcriptiona 25.7 1.8E+02 0.0063 25.7 7.7 34 130-163 67-101 (292)
168 3kke_A LACI family transcripti 25.7 2.9E+02 0.01 24.6 9.2 39 25-63 14-53 (303)
169 1xjc_A MOBB protein homolog; s 25.6 1.1E+02 0.0038 25.3 5.5 39 27-65 4-42 (169)
170 2woj_A ATPase GET3; tail-ancho 25.5 75 0.0026 30.1 5.0 42 25-66 16-59 (354)
171 3m48_A General control protein 25.3 86 0.0029 18.0 3.1 27 415-441 4-32 (33)
172 4eg0_A D-alanine--D-alanine li 25.3 87 0.003 28.8 5.4 38 26-63 13-53 (317)
173 2bni_A General control protein 25.1 79 0.0027 18.2 2.9 28 414-441 4-33 (34)
174 4fbl_A LIPS lipolytic enzyme; 25.0 44 0.0015 30.1 3.2 27 35-61 58-84 (281)
175 1uo4_A General control protein 24.8 96 0.0033 17.9 3.2 28 414-441 4-33 (34)
176 1g3q_A MIND ATPase, cell divis 24.8 97 0.0033 26.8 5.4 37 29-65 5-41 (237)
177 2w36_A Endonuclease V; hypoxan 24.6 51 0.0018 28.9 3.3 43 123-165 93-142 (225)
178 1mio_B Nitrogenase molybdenum 24.5 1.3E+02 0.0043 29.7 6.6 34 123-161 377-410 (458)
179 1byi_A Dethiobiotin synthase; 24.3 97 0.0033 26.5 5.3 34 29-62 4-37 (224)
180 1iow_A DD-ligase, DDLB, D-ALA\ 24.3 96 0.0033 28.1 5.5 38 27-64 3-43 (306)
181 3e8x_A Putative NAD-dependent 24.3 85 0.0029 27.2 4.9 36 24-64 19-54 (236)
182 3e61_A Putative transcriptiona 24.2 1.2E+02 0.0041 26.8 6.0 39 25-63 7-46 (277)
183 3uow_A GMP synthetase; structu 24.2 1.5E+02 0.0051 30.1 7.2 28 288-324 7-34 (556)
184 1qzu_A Hypothetical protein MD 24.1 31 0.0011 29.9 1.8 42 24-67 17-59 (206)
185 2hna_A Protein MIOC, flavodoxi 24.0 1.1E+02 0.0038 24.2 5.2 35 28-62 3-37 (147)
186 3qk7_A Transcriptional regulat 23.9 2.4E+02 0.0082 25.1 8.2 40 25-64 5-49 (294)
187 2jk1_A HUPR, hydrogenase trans 23.8 2.4E+02 0.0082 21.4 7.5 52 377-430 71-124 (139)
188 3l49_A ABC sugar (ribose) tran 23.5 1.5E+02 0.0053 26.3 6.7 39 25-63 4-43 (291)
189 1iuk_A Hypothetical protein TT 23.5 2.7E+02 0.0093 21.9 8.6 116 277-407 3-123 (140)
190 1ydg_A Trp repressor binding p 23.2 82 0.0028 26.9 4.5 37 27-64 7-44 (211)
191 5nul_A Flavodoxin; electron tr 23.1 55 0.0019 25.7 3.1 35 30-65 2-37 (138)
192 1p9o_A Phosphopantothenoylcyst 23.0 48 0.0017 30.8 3.0 42 23-65 33-89 (313)
193 3lyu_A Putative hydrogenase; t 23.0 85 0.0029 25.0 4.2 35 26-64 18-52 (142)
194 1mvl_A PPC decarboxylase athal 23.0 64 0.0022 28.0 3.6 41 24-67 17-57 (209)
195 1ihu_A Arsenical pump-driving 22.8 97 0.0033 31.6 5.6 41 25-65 6-46 (589)
196 3q9l_A Septum site-determining 22.8 1.1E+02 0.0037 26.9 5.4 37 29-65 5-41 (260)
197 3tqi_A GMP synthase [glutamine 22.7 1.6E+02 0.0056 29.5 7.1 28 288-324 10-37 (527)
198 3qua_A Putative uncharacterize 22.5 2.2E+02 0.0076 24.3 6.9 97 278-385 43-154 (199)
199 1q74_A 1D-MYO-inosityl 2-aceta 22.0 98 0.0034 28.5 5.0 38 26-64 4-41 (303)
200 3dm5_A SRP54, signal recogniti 21.8 1.2E+02 0.0041 29.7 5.7 41 27-67 100-140 (443)
201 2lpm_A Two-component response 21.7 36 0.0012 26.6 1.6 40 122-163 44-88 (123)
202 1u7z_A Coenzyme A biosynthesis 21.5 1.2E+02 0.004 26.6 5.0 23 42-64 35-57 (226)
203 1hyq_A MIND, cell division inh 21.4 1.2E+02 0.0039 26.9 5.3 37 29-65 5-41 (263)
204 1f9y_A HPPK, protein (6-hydrox 21.3 1.1E+02 0.0039 25.0 4.6 29 291-322 2-30 (158)
205 2bru_C NAD(P) transhydrogenase 21.0 80 0.0027 26.2 3.5 42 24-66 28-72 (186)
206 2qx0_A 7,8-dihydro-6-hydroxyme 20.9 1.6E+02 0.0053 24.2 5.3 29 291-322 3-31 (159)
207 3kcn_A Adenylate cyclase homol 20.8 2.9E+02 0.01 21.3 7.3 51 377-430 75-128 (151)
208 1d4o_A NADP(H) transhydrogenas 20.7 72 0.0025 26.4 3.2 42 24-66 20-64 (184)
209 3kkj_A Amine oxidase, flavin-c 20.6 54 0.0018 28.7 2.8 21 43-63 13-33 (336)
210 1o4v_A Phosphoribosylaminoimid 20.6 3.8E+02 0.013 22.5 11.9 140 288-442 12-162 (183)
211 3b6i_A Flavoprotein WRBA; flav 20.5 97 0.0033 25.9 4.4 36 28-64 3-40 (198)
212 3e9m_A Oxidoreductase, GFO/IDH 20.5 1.3E+02 0.0044 27.9 5.5 107 290-407 7-124 (330)
213 2hpv_A FMN-dependent NADH-azor 20.3 1.1E+02 0.0038 25.9 4.7 37 27-63 2-44 (208)
214 3of5_A Dethiobiotin synthetase 20.0 1.3E+02 0.0044 26.2 5.1 37 27-63 4-41 (228)
No 1
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2e-50 Score=416.16 Aligned_cols=395 Identities=17% Similarity=0.250 Sum_probs=265.1
Q ss_pred CceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCcc--cc---------CCeEEEEecCcccchhhHHHHHh
Q psy14941 26 CSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETLV--HY---------ERMKVLDIKGTHTYNSTIEDIYE 94 (513)
Q Consensus 26 ~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~~--~~---------~~~~~i~~~~~~~~~~~~~~~~~ 94 (513)
..||| ++|++++||++|++.||++|++|||+||++++...... .. .+++++.++. .... ...+. +
T Consensus 8 ~~~vl-~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~-~lp~-~~~~~-~ 83 (482)
T 2pq6_A 8 KPHVV-MIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPD-GLTP-MEGDG-D 83 (482)
T ss_dssp CCEEE-EECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECC-CCC---------
T ss_pred CCEEE-EecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCC-CCCC-ccccc-C
Confidence 35888 88999999999999999999999999999998653211 01 2677777652 1111 00000 0
Q ss_pred hchhHHHHHHHHHHHHHHH-HHHHhCCHhHHHHhcc---CCCccEEEEccchhchHHhhhhccCCCEEEEeCCCCchhhh
Q psy14941 95 LSADSIKRIHINFIDQEIQ-VENIFLHENMKSIWNM---ENKYDLIITEMFLTDAFLVIPYLYKVPYISIASSTLHPQHS 170 (513)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~---~~~~Dlvi~d~~~~~~~~~~a~~l~iP~i~~~~~~~~~~~~ 170 (513)
... .+.. +...... |...+ .++.+.++. ..+||+||+|.++.++. .+|+++|||++.+++++......
T Consensus 84 ~~~-~~~~----~~~~~~~~~~~~l--~~ll~~l~~~~~~~~~d~vI~D~~~~~~~-~vA~~lgiP~v~~~~~~~~~~~~ 155 (482)
T 2pq6_A 84 VSQ-DVPT----LCQSVRKNFLKPY--CELLTRLNHSTNVPPVTCLVSDCCMSFTI-QAAEEFELPNVLYFSSSACSLLN 155 (482)
T ss_dssp --C-CHHH----HHHHHTTSSHHHH--HHHHHHHHTCSSSCCCCEEEEETTCTHHH-HHHHHTTCCEEEEECSCHHHHHH
T ss_pred cch-hHHH----HHHHHHHHhhHHH--HHHHHHHhhhccCCCceEEEECCcchhHH-HHHHHcCCCEEEEecccHHHHHH
Confidence 001 1111 1122222 44332 233333331 25899999999887666 69999999999999887644322
Q ss_pred h-hcCCCCCCCccCcccCCCCCCCCHHHHHHHHHHHHH---HHHHHHhhchhHHHHHHHHhCCCCCCHHhhhcCccEEEE
Q psy14941 171 E-RLGLPDNPSYIPSYVSAYTDHMSFTERLSNTFVGLY---YKWYYDYKSHGAANRIIHKYFPEIPRIQDLLNTCSLTLV 246 (513)
Q Consensus 171 ~-~~g~p~~~s~~P~~~~~~~~~~~~~~r~~n~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ 246 (513)
. ..+.+..++++|.....+. .+++++|..|.+.... ...+..............+.+ ....+...+++++|+
T Consensus 156 ~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~vl~ 231 (482)
T 2pq6_A 156 VMHFRSFVERGIIPFKDESYL-TNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFF---IEVADRVNKDTTILL 231 (482)
T ss_dssp HTTHHHHHHTTCSSCSSGGGG-TSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHH---HHHHHTCCTTCCEEE
T ss_pred HHHHHHHHhcCCCCCcccccc-ccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHH---HHHHHhhccCCEEEE
Confidence 1 1122222334443221111 1122222211100000 000000000000000000000 012334567899999
Q ss_pred eccCccCCC-----ccCCCceEEeCccccc--CC----------CCC---cHHHHHHhhcC-CCceEEEEeCcccccCCC
Q psy14941 247 NTHHTINIA-----RPLPANVVEIGGIHVK--PA----------KKL---NEEMERFLNES-HNGVIYFSMGSMLKTSSF 305 (513)
Q Consensus 247 ~s~~~l~~~-----~p~~p~~~~vG~l~~~--~~----------~~l---~~~l~~~l~~~-~~~~v~vs~Gs~~~~~~~ 305 (513)
||+++||++ ++..|++++|||++.. .. ..+ +.++.+|+++. ++++|||||||.. ..
T Consensus 232 nt~~~le~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~---~~ 308 (482)
T 2pq6_A 232 NTFNELESDVINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTT---VM 308 (482)
T ss_dssp SSCGGGGHHHHHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSS---CC
T ss_pred cChHHHhHHHHHHHHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcc---cC
Confidence 999999987 7766899999999864 22 122 33588999976 6799999999986 56
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEEcCCC-------CCC----CCCCCcEEEecCCCccccccCCCceEEeccCCcccHHHH
Q psy14941 306 PPDKFKAFLKAFSKIPQRVLWKFEDND-------TSI----FKPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEA 374 (513)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~i~~~~~~~-------~~~----~~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Ea 374 (513)
+.+.+..+++++++.+.+|+|+++.+. +++ .. ++|+++.+|+||.++|+|+++++||||||+||++||
T Consensus 309 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Ea 387 (482)
T 2pq6_A 309 TPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTES 387 (482)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHH
Confidence 778899999999999999999997532 221 13 579999999999999999999999999999999999
Q ss_pred HHcCcceEeeccccCcHHHHHHHH-HcCcEEEeccCCCCHHHHHHHHHHhc-CH---HHHHHHHHHHHHHhc
Q psy14941 375 VYEGIPVLGIPVFGDQWANIKKLE-SLKAGKLLPYLEITEETVSDALKIVL-SP---EYKENAEDLGTRFRD 441 (513)
Q Consensus 375 l~~GvP~i~~P~~~DQ~~na~~~~-~~G~G~~l~~~~~~~~~l~~ai~~ll-~~---~y~~~a~~~~~~~~~ 441 (513)
+++|||+|++|+++||+.||++++ ++|+|+.++ .+++.++|.++|+++| |+ +||+||+++++.+++
T Consensus 388 l~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~ 458 (482)
T 2pq6_A 388 ICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEE 458 (482)
T ss_dssp HHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999997 799999998 6899999999999999 88 699999999999986
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.7e-48 Score=400.44 Aligned_cols=393 Identities=17% Similarity=0.223 Sum_probs=268.7
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhC-CCcEEEEEeecC--Ccc-c------cCCeEEEEecCcccchhhHHHHHhhc
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQR-GHDLTVITQYPE--TLV-H------YERMKVLDIKGTHTYNSTIEDIYELS 96 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~r-GH~Vt~~~~~~~--~~~-~------~~~~~~i~~~~~~~~~~~~~~~~~~~ 96 (513)
.+|+ ++|++++||++|++.||++|++| ||+||++++... ... . ..+++++.++..... +. ....
T Consensus 7 ~~vl-~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-~~----~~~~ 80 (480)
T 2vch_A 7 PHVA-IIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLT-DL----SSST 80 (480)
T ss_dssp CEEE-EECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCT-TS----CTTC
T ss_pred cEEE-EecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCC-CC----CCch
Confidence 5676 88999999999999999999998 999999998763 221 0 146888887633211 10 0000
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhCCHhHHHHhcc---CCCc-cEEEEccchhchHHhhhhccCCCEEEEeCCCCchhh---
Q psy14941 97 ADSIKRIHINFIDQEIQVENIFLHENMKSIWNM---ENKY-DLIITEMFLTDAFLVIPYLYKVPYISIASSTLHPQH--- 169 (513)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~-Dlvi~d~~~~~~~~~~a~~l~iP~i~~~~~~~~~~~--- 169 (513)
+ .+..+.. . .. ...+.+.++++. ..++ |+||+|.+..++. .+|+++|||++.+++++.....
T Consensus 81 ~-~~~~~~~-~------~~--~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~-~vA~~lgiP~v~~~~~~~~~~~~~~ 149 (480)
T 2vch_A 81 R-IESRISL-T------VT--RSNPELRKVFDSFVEGGRLPTALVVDLFGTDAF-DVAVEFHVPPYIFYPTTANVLSFFL 149 (480)
T ss_dssp C-HHHHHHH-H------HH--TTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGH-HHHHHTTCCEEEEECSCHHHHHHHH
T ss_pred h-HHHHHHH-H------HH--hhhHHHHHHHHHhccCCCCCeEEEECCcchhHH-HHHHHcCCCEEEEECccHHHHHHHH
Confidence 1 1111111 1 00 112344444431 3478 9999999888876 6999999999999988754221
Q ss_pred -----hhh--------cCCCCCCCccCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCHHh
Q psy14941 170 -----SER--------LGLPDNPSYIPSYVSAYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRIQD 236 (513)
Q Consensus 170 -----~~~--------~g~p~~~s~~P~~~~~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (513)
... .+.+..|++.|.....++.. +++|..+.+.. ..+.. .
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~Pg~~p~~~~~l~~~--~~~~~~~~~~~--------------~~~~~-----------~ 202 (480)
T 2vch_A 150 HLPKLDETVSCEFRELTEPLMLPGCVPVAGKDFLDP--AQDRKDDAYKW--------------LLHNT-----------K 202 (480)
T ss_dssp HHHHHHHHCCSCGGGCSSCBCCTTCCCBCGGGSCGG--GSCTTSHHHHH--------------HHHHH-----------H
T ss_pred HHHHHHhcCCCcccccCCcccCCCCCCCChHHCchh--hhcCCchHHHH--------------HHHHH-----------H
Confidence 110 11122344433322222211 12221111000 00001 1
Q ss_pred hhcCccEEEEeccCccCC--------CccCCCceEEeCcccccCC----CCCcHHHHHHhhcC-CCceEEEEeCcccccC
Q psy14941 237 LLNTCSLTLVNTHHTINI--------ARPLPANVVEIGGIHVKPA----KKLNEEMERFLNES-HNGVIYFSMGSMLKTS 303 (513)
Q Consensus 237 ~~~~~~l~l~~s~~~l~~--------~~p~~p~~~~vG~l~~~~~----~~l~~~l~~~l~~~-~~~~v~vs~Gs~~~~~ 303 (513)
..+..+.+++|+..+++. +++..|++++|||++.... .+.++++.+|+++. ++++|||||||..
T Consensus 203 ~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~--- 279 (480)
T 2vch_A 203 RYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGG--- 279 (480)
T ss_dssp HGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTC---
T ss_pred hcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEEEEeccccccccccCccchhHHHHHhcCCCCCceEEEeccccc---
Confidence 123356677899888886 2333578999999986542 33667899999976 6899999999997
Q ss_pred CCCHHHHHHHHHHHhcCCCeEEEEEcCCC---------------CCCCCCCCcE---------EEecCCCccccccCCCc
Q psy14941 304 SFPPDKFKAFLKAFSKIPQRVLWKFEDND---------------TSIFKPYKNI---------RTSSWMPQRDIFAHPNM 359 (513)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------------~~~~~~~~nv---------~~~~~~pq~~lL~h~~~ 359 (513)
..+.+++.++++++++.+.+|||+++... +.+.+ |+|+ .+.+|+||.++|.|+++
T Consensus 280 ~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~l-p~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v 358 (480)
T 2vch_A 280 TLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFL-PPGFLERTKKRGFVIPFWAPQAQVLAHPST 358 (480)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGS-CTTHHHHTTTTEEEEESCCCHHHHHHSTTE
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhc-CHHHHHHhCCCeEEEeCccCHHHHhCCCCc
Confidence 56889999999999999999999997632 11125 7774 45559999999999999
Q ss_pred eEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHH-HHcCcEEEeccC---CCCHHHHHHHHHHhc-C---HHHHHH
Q psy14941 360 KLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKL-ESLKAGKLLPYL---EITEETVSDALKIVL-S---PEYKEN 431 (513)
Q Consensus 360 ~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~-~~~G~G~~l~~~---~~~~~~l~~ai~~ll-~---~~y~~~ 431 (513)
++||||||+||++||+++|||||++|+++||+.||+++ +++|+|+.++.. .++.++|.++|+++| + ++||+|
T Consensus 359 ~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~ 438 (480)
T 2vch_A 359 GGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNK 438 (480)
T ss_dssp EEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHH
T ss_pred CeEEecccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHH
Confidence 99999999999999999999999999999999999997 799999999865 689999999999999 3 579999
Q ss_pred HHHHHHHHhc---CCCChHHHHHHHHHHHHHhCCCCCcccc
Q psy14941 432 AEDLGTRFRD---RPQSPLEVAIYWIEYVIKYNGAYHLQSA 469 (513)
Q Consensus 432 a~~~~~~~~~---~~~~~~~~a~~~ie~~~~~~~~~~l~~~ 469 (513)
|+++++.+++ +.-.+.......|+.+.+ +..+++.+
T Consensus 439 a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~--~~~~~~~~ 477 (480)
T 2vch_A 439 MKELKEAACRVLKDDGTSTKALSLVALKWKA--HKKELEQN 477 (480)
T ss_dssp HHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH--HHHHHHC-
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH--hHHHhhhc
Confidence 9999999987 421223455556665533 44445443
No 3
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=5.8e-48 Score=389.75 Aligned_cols=375 Identities=15% Similarity=0.265 Sum_probs=264.8
Q ss_pred cCceEeEEcCCCCCChHHHHHHHHHHHHhCC--CcEEEEEeecCCc----c---ccCCeEEEEecCcccchhhHHHHHhh
Q psy14941 25 QCSKILAIFPTPAKSHQIIFDTILVELYQRG--HDLTVITQYPETL----V---HYERMKVLDIKGTHTYNSTIEDIYEL 95 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~~~~la~~L~~rG--H~Vt~~~~~~~~~----~---~~~~~~~i~~~~~~~~~~~~~~~~~~ 95 (513)
...+|+ ++|+|++||++|++.||+.|++|| +.||++++..... . ...++++..++. ..+.+.. ...+.
T Consensus 12 ~~~hvv-~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipd-glp~~~~-~~~~~ 88 (454)
T 3hbf_A 12 NLLHVA-VLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHD-GLPKGYV-SSGNP 88 (454)
T ss_dssp CCCEEE-EECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCC-CCCTTCC-CCSCT
T ss_pred CCCEEE-EEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCC-CCCCCcc-ccCCh
Confidence 356888 899999999999999999999999 9999999853211 1 023578877751 1111100 00000
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhCCHhHHHHhcc-CCCccEEEEccchhchHHhhhhccCCCEEEEeCCCCchhhhhh--
Q psy14941 96 SADSIKRIHINFIDQEIQVENIFLHENMKSIWNM-ENKYDLIITEMFLTDAFLVIPYLYKVPYISIASSTLHPQHSER-- 172 (513)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~Dlvi~d~~~~~~~~~~a~~l~iP~i~~~~~~~~~~~~~~-- 172 (513)
. ..+.. +... +...+ .+.+.++++. ..++|+||+|.++.++. .+|+++|||.+.+++++........
T Consensus 89 ~-~~~~~----~~~~---~~~~~-~~~l~~~~~~~~~~~~~iI~D~~~~w~~-~vA~~lgIP~~~f~t~~a~~~~~~~~~ 158 (454)
T 3hbf_A 89 R-EPIFL----FIKA---MQENF-KHVIDEAVAETGKNITCLVTDAFFWFGA-DLAEEMHAKWVPLWTAGPHSLLTHVYT 158 (454)
T ss_dssp T-HHHHH----HHHH---HHHHH-HHHHHHHHHHHCCCCCEEEEETTCTTHH-HHHHHTTCEEEEEECSCHHHHHHHHTH
T ss_pred H-HHHHH----HHHH---HHHHH-HHHHHHHHhhcCCCCcEEEECCcchHHH-HHHHHhCCCEEEEeCccHHHHHHHHhh
Confidence 0 01111 1111 11111 1122233321 35799999999988877 7999999999999998764432111
Q ss_pred ------cC-----CCCCCCccCcc----cCCCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCHHhh
Q psy14941 173 ------LG-----LPDNPSYIPSY----VSAYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRIQDL 237 (513)
Q Consensus 173 ------~g-----~p~~~s~~P~~----~~~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (513)
.+ ...+..++|.. ..+++..... ++ ... ..+.+.+ ..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~-~~-~~~-----------------~~~~~~~-------~~~~ 212 (454)
T 3hbf_A 159 DLIREKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIK-DI-DVP-----------------FATMLHK-------MGLE 212 (454)
T ss_dssp HHHHHTCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSS-CT-TSH-----------------HHHHHHH-------HHHH
T ss_pred HHHHhhcCCCccccccccccCCCCCCcChhhCchhhcc-CC-chH-----------------HHHHHHH-------HHHh
Confidence 01 00111122321 1111111000 00 000 0000000 1122
Q ss_pred hcCccEEEEeccCccCCC-----ccCCCceEEeCcccccCCC---CCcHHHHHHhhcC-CCceEEEEeCcccccCCCCHH
Q psy14941 238 LNTCSLTLVNTHHTINIA-----RPLPANVVEIGGIHVKPAK---KLNEEMERFLNES-HNGVIYFSMGSMLKTSSFPPD 308 (513)
Q Consensus 238 ~~~~~l~l~~s~~~l~~~-----~p~~p~~~~vG~l~~~~~~---~l~~~l~~~l~~~-~~~~v~vs~Gs~~~~~~~~~~ 308 (513)
...++.+++||+++||.+ ++..|++++|||++...+. ..++++.+|++.. ++++|||||||.. ..+.+
T Consensus 213 ~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~---~~~~~ 289 (454)
T 3hbf_A 213 LPRANAVAINSFATIHPLIENELNSKFKLLLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVV---TPPPH 289 (454)
T ss_dssp GGGSSCEEESSCGGGCHHHHHHHHTTSSCEEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSC---CCCHH
T ss_pred hccCCEEEECChhHhCHHHHHHHHhcCCCEEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCC---cCCHH
Confidence 355789999999999986 7777899999999875422 2356799999976 6899999999998 56788
Q ss_pred HHHHHHHHHhcCCCeEEEEEcCCC---CCC----CCCCCcEEEecCCCccccccCCCceEEeccCCcccHHHHHHcCcce
Q psy14941 309 KFKAFLKAFSKIPQRVLWKFEDND---TSI----FKPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEGIPV 381 (513)
Q Consensus 309 ~~~~~~~~~~~~~~~~i~~~~~~~---~~~----~~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~ 381 (513)
++.+++.++++.+.+|||+++++. +++ .. ++|+++++|+||.++|.|+.+++||||||+||++||+++|||+
T Consensus 290 ~~~el~~~l~~~~~~flw~~~~~~~~~lp~~~~~~~-~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~ 368 (454)
T 3hbf_A 290 ELTALAESLEECGFPFIWSFRGDPKEKLPKGFLERT-KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPM 368 (454)
T ss_dssp HHHHHHHHHHHHCCCEEEECCSCHHHHSCTTHHHHT-TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHhCCCeEEEEeCCcchhcCCHhHHhhc-CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCE
Confidence 999999999999999999998743 222 13 5799999999999999999999999999999999999999999
Q ss_pred EeeccccCcHHHHHHHHH-cCcEEEeccCCCCHHHHHHHHHHhc-CH---HHHHHHHHHHHHHhcC
Q psy14941 382 LGIPVFGDQWANIKKLES-LKAGKLLPYLEITEETVSDALKIVL-SP---EYKENAEDLGTRFRDR 442 (513)
Q Consensus 382 i~~P~~~DQ~~na~~~~~-~G~G~~l~~~~~~~~~l~~ai~~ll-~~---~y~~~a~~~~~~~~~~ 442 (513)
|++|+++||+.||+++++ .|+|+.++...++.++|.++|+++| |+ +||+||+++++.+++.
T Consensus 369 i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a 434 (454)
T 3hbf_A 369 ISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKA 434 (454)
T ss_dssp EECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999 5999999977899999999999999 86 8999999999998754
No 4
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=7.7e-46 Score=376.15 Aligned_cols=398 Identities=14% Similarity=0.098 Sum_probs=276.9
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCcc-ccCCeEEEEecCcccchhhHHHHHhhchhHHHHHHH
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETLV-HYERMKVLDIKGTHTYNSTIEDIYELSADSIKRIHI 105 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (513)
.||| +++.++.||++|+++||++|++|||+|+++++...... ...+++++.++... .+... .... .+.. .
T Consensus 1 M~Il-~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~i~~~~--~~~~~---~~~~-~~~~--~ 71 (415)
T 1iir_A 1 MRVL-LATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSA--RAPIQ---RAKP-LTAE--D 71 (415)
T ss_dssp CEEE-EECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEECCC------------CCSC-CCHH--H
T ss_pred CeEE-EEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHcCCeeeeCCCCH--HHHhh---cccc-cchH--H
Confidence 3788 66999999999999999999999999999998764332 13467777765321 01000 0010 0000 0
Q ss_pred HHHHHHHHHHHHhCCHhHHHHhccCCCccEEEEcc-chhc--hHHhhhhccCCCEEEEeCCCCchhhhhhcCCCCCCCcc
Q psy14941 106 NFIDQEIQVENIFLHENMKSIWNMENKYDLIITEM-FLTD--AFLVIPYLYKVPYISIASSTLHPQHSERLGLPDNPSYI 182 (513)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~Dlvi~d~-~~~~--~~~~~a~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~ 182 (513)
+..+ +.... ...+.++++...+||+||+|. +..+ +. .+|+.+|||++.+.+.+... +..++
T Consensus 72 -~~~~---~~~~~-~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~-~~A~~lgiP~v~~~~~~~~~----------~~~~~ 135 (415)
T 1iir_A 72 -VRRF---TTEAI-ATQFDEIPAAAEGCAAVVTTGLLAAAIGVR-SVAEKLGIPYFYAFHCPSYV----------PSPYY 135 (415)
T ss_dssp -HHHH---HHHHH-HHHHHHHHHHTTTCSEEEEESCHHHHHHHH-HHHHHHTCCEEEEESSGGGS----------CCSSS
T ss_pred -HHHH---HHHHH-HHHHHHHHHHhcCCCEEEECChhHhHhhHH-HHHHHhCCCEEEEecCCCcC----------CCccc
Confidence 1111 11110 111223321146899999997 4444 44 69999999999988765322 12233
Q ss_pred CcccCCCCCCCCHHHH-HHHHHHHHHHHHHHHhhchhHHHHHHHHhCCC--CCCHHhhhcCccEEEEeccCccCC-CccC
Q psy14941 183 PSYVSAYTDHMSFTER-LSNTFVGLYYKWYYDYKSHGAANRIIHKYFPE--IPRIQDLLNTCSLTLVNTHHTINI-ARPL 258 (513)
Q Consensus 183 P~~~~~~~~~~~~~~r-~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~l~~s~~~l~~-~~p~ 258 (513)
|....+ ++++.+ ..|.+..............+..++. ++.+|. .+++.+..... ..++|+++.+++ +++.
T Consensus 136 p~~~~~----~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~~~~ 209 (415)
T 1iir_A 136 PPPPLG----EPSTQDTIDIPAQWERNNQSAYQRYGGLLNSH-RDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQPTD 209 (415)
T ss_dssp CCCC-------------CHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCCCCS
T ss_pred CCccCC----ccccchHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHcCCCCCCccccccCCC-CEEEeeChhhcCCCccc
Confidence 433221 233222 3444332211111111111233333 445654 34566665555 899999999998 6665
Q ss_pred CCceEEeCcccccCCCCCcHHHHHHhhcCCCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCCC--CCC
Q psy14941 259 PANVVEIGGIHVKPAKKLNEEMERFLNESHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDNDT--SIF 336 (513)
Q Consensus 259 ~p~~~~vG~l~~~~~~~l~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~ 336 (513)
. ++++||++..++..+.++++.+|++. ++++|||++||.. .+.+..+.+++++++.+.+++|.+++... .+
T Consensus 210 ~-~~~~vG~~~~~~~~~~~~~~~~~l~~-~~~~v~v~~Gs~~----~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~- 282 (415)
T 1iir_A 210 L-DAVQTGAWILPDERPLSPELAAFLDA-GPPPVYLGFGSLG----APADAVRVAIDAIRAHGRRVILSRGWADLVLPD- 282 (415)
T ss_dssp S-CCEECCCCCCCCCCCCCHHHHHHHHT-SSCCEEEECC-------CCHHHHHHHHHHHHHTTCCEEECTTCTTCCCSS-
T ss_pred C-CeEeeCCCccCcccCCCHHHHHHHhh-CCCeEEEeCCCCC----CcHHHHHHHHHHHHHCCCeEEEEeCCCcccccC-
Confidence 5 89999999876545678899999985 5689999999984 36788999999999999999998876432 33
Q ss_pred CCCCcEEEecCCCccccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHH
Q psy14941 337 KPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETV 416 (513)
Q Consensus 337 ~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l 416 (513)
. ++|+.+.+|+||.++| +++++||||||+||++||+++|+|+|++|.++||..||+++++.|+|+.++.++++.++|
T Consensus 283 ~-~~~v~~~~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l 359 (415)
T 1iir_A 283 D-GADCFAIGEVNHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSL 359 (415)
T ss_dssp C-GGGEEECSSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHH
T ss_pred C-CCCEEEeCcCChHHHH--hhCCEEEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHH
Confidence 5 7899999999999999 999999999999999999999999999999999999999999999999998878999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHhCCCCCcc
Q psy14941 417 SDALKIVLSPEYKENAEDLGTRFRDRPQSPLEVAIYWIEYVIKYNGAYHLQ 467 (513)
Q Consensus 417 ~~ai~~ll~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~~~~~~~~~~l~ 467 (513)
.++|+++-|++|+++|+++++.++.. ++.++++++||+++++++.+|+-
T Consensus 360 ~~~i~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~ 408 (415)
T 1iir_A 360 SAALATALTPETHARATAVAGTIRTD--GAAVAARLLLDAVSREKPTVSAL 408 (415)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHHSCSC--HHHHHHHHHHHHHHTC-------
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHhhc--ChHHHHHHHHHHHHhcccHHHHh
Confidence 99999985589999999999999765 89999999999999999888763
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=4.7e-45 Score=372.37 Aligned_cols=389 Identities=16% Similarity=0.278 Sum_probs=262.4
Q ss_pred CceEeEEcCCCCCChHHHHHHHHHHHHhCCCcE--EEEEeecC-----Cccc---cCCeEEEEecCcccchhhHHHHHhh
Q psy14941 26 CSKILAIFPTPAKSHQIIFDTILVELYQRGHDL--TVITQYPE-----TLVH---YERMKVLDIKGTHTYNSTIEDIYEL 95 (513)
Q Consensus 26 ~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~V--t~~~~~~~-----~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~ 95 (513)
..+|+ ++|++++||++|++.||++|++|||+| |+++++.. .... ..+++++.++. ....... .
T Consensus 7 ~~hvv-~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~-glp~~~~-----~ 79 (456)
T 2c1x_A 7 NPHVA-VLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISD-GVPEGYV-----F 79 (456)
T ss_dssp CCEEE-EECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCC-CCCTTCC-----C
T ss_pred CCEEE-EEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCC-CCCCccc-----c
Confidence 46887 889999999999999999999998876 55665321 1000 13677777642 1111100 0
Q ss_pred chhHHHHHHHHHHHHHHH-HHHHhCCHhHHHHhcc-CCCccEEEEccchhchHHhhhhccCCCEEEEeCCCCchhhh---
Q psy14941 96 SADSIKRIHINFIDQEIQ-VENIFLHENMKSIWNM-ENKYDLIITEMFLTDAFLVIPYLYKVPYISIASSTLHPQHS--- 170 (513)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~-~~~~Dlvi~d~~~~~~~~~~a~~l~iP~i~~~~~~~~~~~~--- 170 (513)
.......... +...... ++.. +.++++. ..+||+||+|.++.++. .+|+++|||++.+++++......
T Consensus 80 ~~~~~~~~~~-~~~~~~~~~~~~-----l~~l~~~~~~~~d~vI~D~~~~~~~-~vA~~lgiP~v~~~~~~~~~~~~~~~ 152 (456)
T 2c1x_A 80 AGRPQEDIEL-FTRAAPESFRQG-----MVMAVAETGRPVSCLVADAFIWFAA-DMAAEMGVAWLPFWTAGPNSLSTHVY 152 (456)
T ss_dssp CCCTTHHHHH-HHHHHHHHHHHH-----HHHHHHHHTCCCCEEEEETTSTTHH-HHHHHHTCEEEEEECSCHHHHHHHHT
T ss_pred cCChHHHHHH-HHHHhHHHHHHH-----HHHHHhccCCCceEEEECCchHhHH-HHHHHhCCCEEEEeCccHHHHHHHhh
Confidence 0001111111 1111111 2222 2222211 35899999999987766 69999999999999886543211
Q ss_pred -----hhcCCCC-------CCCccCcccC----CCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCH
Q psy14941 171 -----ERLGLPD-------NPSYIPSYVS----AYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRI 234 (513)
Q Consensus 171 -----~~~g~p~-------~~s~~P~~~~----~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (513)
...+.+. ...++|.... .++....+ .. . .....+.+.+ .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~-~~----------------~-~~~~~~~~~~-------~ 207 (456)
T 2c1x_A 153 IDEIREKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVF-GN----------------L-NSLFSRMLHR-------M 207 (456)
T ss_dssp HHHHHHHHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSS-SC----------------T-TSHHHHHHHH-------H
T ss_pred hHHHHhccCCcccccccccccccCCCCCcccHHhCchhhcC-CC----------------c-ccHHHHHHHH-------H
Confidence 1123211 1112232210 00000000 00 0 0001111111 1
Q ss_pred HhhhcCccEEEEeccCccCCC-----ccCCCceEEeCcccccCCC-CCc--HHHHHHhhcC-CCceEEEEeCcccccCCC
Q psy14941 235 QDLLNTCSLTLVNTHHTINIA-----RPLPANVVEIGGIHVKPAK-KLN--EEMERFLNES-HNGVIYFSMGSMLKTSSF 305 (513)
Q Consensus 235 ~~~~~~~~l~l~~s~~~l~~~-----~p~~p~~~~vG~l~~~~~~-~l~--~~l~~~l~~~-~~~~v~vs~Gs~~~~~~~ 305 (513)
.+..++++.+++||++++|++ ++..|++++|||++..... .++ .++.+|++.. ++++|||||||.. ..
T Consensus 208 ~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~---~~ 284 (456)
T 2c1x_A 208 GQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVT---TP 284 (456)
T ss_dssp HHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCEEECCCHHHHC---------CHHHHHHTSCTTCEEEEECCSSC---CC
T ss_pred HHhhhhCCEEEECChHHHhHHHHHHHHhcCCCEEEecCcccCcccccccchhhHHHHHhcCCCcceEEEecCccc---cC
Confidence 122356789999999999997 6666899999999865422 133 4588999875 6899999999998 45
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEEcCCC---CCC-C---CCCCcEEEecCCCccccccCCCceEEeccCCcccHHHHHHcC
Q psy14941 306 PPDKFKAFLKAFSKIPQRVLWKFEDND---TSI-F---KPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEG 378 (513)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~-~---~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~G 378 (513)
+.+++..+++++++.+.+|+|+++++. +++ + . ++|+++.+|+||.++|+|+++++||||||+||++||+++|
T Consensus 285 ~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~G 363 (456)
T 2c1x_A 285 PPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGG 363 (456)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhC
Confidence 778899999999988999999998643 221 0 2 4689999999999999999999999999999999999999
Q ss_pred cceEeeccccCcHHHHHHHHHc-CcEEEeccCCCCHHHHHHHHHHhc-CH---HHHHHHHHHHHHHhcCCC-Ch--HHHH
Q psy14941 379 IPVLGIPVFGDQWANIKKLESL-KAGKLLPYLEITEETVSDALKIVL-SP---EYKENAEDLGTRFRDRPQ-SP--LEVA 450 (513)
Q Consensus 379 vP~i~~P~~~DQ~~na~~~~~~-G~G~~l~~~~~~~~~l~~ai~~ll-~~---~y~~~a~~~~~~~~~~~~-~~--~~~a 450 (513)
||||++|+++||+.||+++++. |+|+.++..+++.++|.++|+++| |+ +||+||+++++.+++... +| ....
T Consensus 364 vP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l 443 (456)
T 2c1x_A 364 VPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENF 443 (456)
T ss_dssp CCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHH
T ss_pred ceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHH
Confidence 9999999999999999999998 999999877899999999999999 87 899999999999975421 22 3444
Q ss_pred HHHHHHH
Q psy14941 451 IYWIEYV 457 (513)
Q Consensus 451 ~~~ie~~ 457 (513)
...|+.+
T Consensus 444 ~~~v~~~ 450 (456)
T 2c1x_A 444 ITLVDLV 450 (456)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4555544
No 6
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=7.5e-45 Score=369.10 Aligned_cols=396 Identities=15% Similarity=0.055 Sum_probs=274.8
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCcc-ccCCeEEEEecCcccchhhHHHHHhhchhHHHHHHH
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETLV-HYERMKVLDIKGTHTYNSTIEDIYELSADSIKRIHI 105 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (513)
.||| +++.++.||++|+++||++|++|||+|+++++...... ...+++++.++... .+..... ... .... .
T Consensus 1 MrIl-~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~~~~~~--~~~~~~~--~~~-~~~~--~ 72 (416)
T 1rrv_A 1 MRVL-LSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVPVGLPQ--HMMLQEG--MPP-PPPE--E 72 (416)
T ss_dssp CEEE-EEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSCCG--GGCCCTT--SCC-CCHH--H
T ss_pred CeEE-EEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCCeeeecCCCH--HHHHhhc--ccc-chhH--H
Confidence 3888 66889999999999999999999999999998654322 13467777765321 0100000 000 0000 0
Q ss_pred HHHHHHHH-HHHHhCCHhHHHHhc-cCCCccEEEEccchhch--HHhhhhccCCCEEEEeCCCCchhhhhhcCCCCCCCc
Q psy14941 106 NFIDQEIQ-VENIFLHENMKSIWN-MENKYDLIITEMFLTDA--FLVIPYLYKVPYISIASSTLHPQHSERLGLPDNPSY 181 (513)
Q Consensus 106 ~~~~~~~~-~~~~~~~~~l~~~l~-~~~~~Dlvi~d~~~~~~--~~~~a~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~ 181 (513)
+...... .. .+.+.++ ...+||+||+|.+...+ ...+|+.+|||++.+.+.+... +..+
T Consensus 73 -~~~~~~~~~~------~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~----------~~~~ 135 (416)
T 1rrv_A 73 -EQRLAAMTVE------MQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYL----------ASPH 135 (416)
T ss_dssp -HHHHHHHHHH------HHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS----------CCSS
T ss_pred -HHHHHHHHHH------HHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCC----------CCcc
Confidence 1111101 11 1112221 13679999999743433 3358999999999887764221 1122
Q ss_pred cCcccCCCCCCCCH-HHHHHHHHHHHHHH-HHHHhhchhHHHHHHHHhCCC--CCCHHhhhcCccEEEEeccCccCCCcc
Q psy14941 182 IPSYVSAYTDHMSF-TERLSNTFVGLYYK-WYYDYKSHGAANRIIHKYFPE--IPRIQDLLNTCSLTLVNTHHTINIARP 257 (513)
Q Consensus 182 ~P~~~~~~~~~~~~-~~r~~n~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~l~~s~~~l~~~~p 257 (513)
+| +... +++ .+|..|.+.+.... ..... ..+..++. ++.+|. .+++.+..... .+++|+.+.++++++
T Consensus 136 ~p-~~~~----~~~~~~r~~n~~~~~~~~~~~~~~-~~~~~~~~-~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~~ 207 (416)
T 1rrv_A 136 LP-PAYD----EPTTPGVTDIRVLWEERAARFADR-YGPTLNRR-RAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPLQP 207 (416)
T ss_dssp SC-CCBC----SCCCTTCCCHHHHHHHHHHHHHHH-HHHHHHHH-HHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCCCS
T ss_pred cC-CCCC----CCCCchHHHHHHHHHHHHHHHHHH-hHHHHHHH-HHHcCCCCCCchhhhccCC-CeEEccCccccCCCC
Confidence 22 1111 111 11222322211111 11111 11334444 334553 34566665656 899999999998766
Q ss_pred CCCceEEeCcccccCCCCCcHHHHHHhhcCCCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCCC--CC
Q psy14941 258 LPANVVEIGGIHVKPAKKLNEEMERFLNESHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDNDT--SI 335 (513)
Q Consensus 258 ~~p~~~~vG~l~~~~~~~l~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~ 335 (513)
.. +++++|++..+...+.++++.+|+++ ++++|||++||... ..+.+..+.+++++++.+.+++|.+++.+. .+
T Consensus 208 ~~-~~~~vG~~~~~~~~~~~~~~~~~l~~-~~~~v~v~~Gs~~~--~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~ 283 (416)
T 1rrv_A 208 DV-DAVQTGAWLLSDERPLPPELEAFLAA-GSPPVHIGFGSSSG--RGIADAAKVAVEAIRAQGRRVILSRGWTELVLPD 283 (416)
T ss_dssp SC-CCEECCCCCCCCCCCCCHHHHHHHHS-SSCCEEECCTTCCS--HHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSC
T ss_pred CC-CeeeECCCccCccCCCCHHHHHHHhc-CCCeEEEecCCCCc--cChHHHHHHHHHHHHHCCCeEEEEeCCccccccC
Confidence 55 89999999876545568899999985 46899999999862 135678899999999999999999876532 33
Q ss_pred CCCCCcEEEecCCCccccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHH
Q psy14941 336 FKPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEET 415 (513)
Q Consensus 336 ~~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~ 415 (513)
. ++|+.+.+|+||.++| +++++||||||+||++||+++|+|+|++|.++||+.||+++++.|+|+.++.++++.++
T Consensus 284 -~-~~~v~~~~~~~~~~ll--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~ 359 (416)
T 1rrv_A 284 -D-RDDCFAIDEVNFQALF--RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFES 359 (416)
T ss_dssp -C-CTTEEEESSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHH
T ss_pred -C-CCCEEEeccCChHHHh--ccCCEEEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHH
Confidence 5 7899999999999999 99999999999999999999999999999999999999999999999999877899999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHhcCCCChHHHHHHHH-HHHHHhCCCCCc
Q psy14941 416 VSDALKIVLSPEYKENAEDLGTRFRDRPQSPLEVAIYWI-EYVIKYNGAYHL 466 (513)
Q Consensus 416 l~~ai~~ll~~~y~~~a~~~~~~~~~~~~~~~~~a~~~i-e~~~~~~~~~~l 466 (513)
|.++|+++.|++|+++|+++++.+++. ++. +++++| |+++++++.+|+
T Consensus 360 l~~~i~~l~~~~~~~~~~~~~~~~~~~--~~~-~~~~~i~e~~~~~~~~~~~ 408 (416)
T 1rrv_A 360 LSAALTTVLAPETRARAEAVAGMVLTD--GAA-AAADLVLAAVGREKPAVPA 408 (416)
T ss_dssp HHHHHHHHTSHHHHHHHHHHTTTCCCC--HHH-HHHHHHHHHHHC-------
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHhhc--CcH-HHHHHHHHHHhccCCCCcc
Confidence 999999985689999999999999875 788 999999 999999888775
No 7
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=8.1e-45 Score=371.65 Aligned_cols=370 Identities=17% Similarity=0.245 Sum_probs=257.6
Q ss_pred cCceEeEEcCCCCCChHHHHHHHHHHHHhC--CCcEEEEEeecCCc-----c-c-----cCCeEEEEecCcccchhhHHH
Q psy14941 25 QCSKILAIFPTPAKSHQIIFDTILVELYQR--GHDLTVITQYPETL-----V-H-----YERMKVLDIKGTHTYNSTIED 91 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~~~~la~~L~~r--GH~Vt~~~~~~~~~-----~-~-----~~~~~~i~~~~~~~~~~~~~~ 91 (513)
+..+|+ ++|++++||++|++.||++|++| ||+||++++..... . . ..++++..++........ .
T Consensus 8 ~~~~vv-~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~--~ 84 (463)
T 2acv_A 8 KNSELI-FIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQE--L 84 (463)
T ss_dssp HCEEEE-EECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCGG--G
T ss_pred CCCEEE-EEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCccc--c
Confidence 346888 88999999999999999999999 99999999875421 0 0 146788777633211110 0
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHHHHhCCHhHHHHhcc--CCCccEEEEccchhchHHhhhhccCCCEEEEeCCCCchhh
Q psy14941 92 IYELSADSIKRIHINFIDQEIQVENIFLHENMKSIWNM--ENKYDLIITEMFLTDAFLVIPYLYKVPYISIASSTLHPQH 169 (513)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~~~Dlvi~d~~~~~~~~~~a~~l~iP~i~~~~~~~~~~~ 169 (513)
. ...... +.. . .. ...+.+.++++. ..+||+||+|.++.++. .+|+++|||++.+++++.....
T Consensus 85 ~--~~~~~~--~~~-~------~~--~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~-~vA~~lgiP~v~~~~~~~~~~~ 150 (463)
T 2acv_A 85 L--KSPEFY--ILT-F------LE--SLIPHVKATIKTILSNKVVGLVLDFFCVSMI-DVGNEFGIPSYLFLTSNVGFLS 150 (463)
T ss_dssp G--GSHHHH--HHH-H------HH--HTHHHHHHHHHHHCCTTEEEEEEEGGGGGGH-HHHHHTTCCEEEEESSCHHHHH
T ss_pred c--CCccHH--HHH-H------HH--hhhHHHHHHHHhccCCCCeEEEECCcchhHH-HHHHHcCCCEEEEeCchHHHHH
Confidence 0 000011 111 1 11 112345555541 36899999999988877 6999999999998887654321
Q ss_pred hh--h--cC------CCCC---CCccCcc-----cCCCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCC
Q psy14941 170 SE--R--LG------LPDN---PSYIPSY-----VSAYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEI 231 (513)
Q Consensus 170 ~~--~--~g------~p~~---~s~~P~~-----~~~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (513)
.. . .. .+.. +..+|.. ...++ ..+.+| .+.+.. ..+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~l~--~~~~~~-~~~~~~--------------~~~~~------- 206 (463)
T 2acv_A 151 LMLSLKNRQIEEVFDDSDRDHQLLNIPGISNQVPSNVLP--DACFNK-DGGYIA--------------YYKLA------- 206 (463)
T ss_dssp HHHHGGGSCTTCCCCCSSGGGCEECCTTCSSCEEGGGSC--HHHHCT-TTHHHH--------------HHHHH-------
T ss_pred HHHHHHhhcccCCCCCccccCceeECCCCCCCCChHHCc--hhhcCC-chHHHH--------------HHHHH-------
Confidence 10 0 00 0000 1122221 11111 112222 111000 00000
Q ss_pred CCHHhhhcCccEEEEeccCccCCCc-----c-C--CCceEEeCcccccCC----C---CCcHHHHHHhhcC-CCceEEEE
Q psy14941 232 PRIQDLLNTCSLTLVNTHHTINIAR-----P-L--PANVVEIGGIHVKPA----K---KLNEEMERFLNES-HNGVIYFS 295 (513)
Q Consensus 232 ~~~~~~~~~~~l~l~~s~~~l~~~~-----p-~--~p~~~~vG~l~~~~~----~---~l~~~l~~~l~~~-~~~~v~vs 295 (513)
+..+.++.+++||.+++|.+. . . .|++++|||++.... . +.++++.+|++.. ++++||||
T Consensus 207 ----~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs 282 (463)
T 2acv_A 207 ----ERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLC 282 (463)
T ss_dssp ----HHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred ----HhcccCCEEEECCHHHHhHHHHHHHHhccccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEE
Confidence 112345667888888887541 0 1 678999999986542 1 3456899999976 67999999
Q ss_pred eCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCC--CCCC-C--CC--CCcEEEecCCCccccccCCCceEEeccCCc
Q psy14941 296 MGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDN--DTSI-F--KP--YKNIRTSSWMPQRDIFAHPNMKLFISHGGL 368 (513)
Q Consensus 296 ~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~-~--~~--~~nv~~~~~~pq~~lL~h~~~~~~IthgG~ 368 (513)
|||... .++.+++..+++++++.+.+|||+++++ .+++ + .- ++|+++.+|+||.++|+|+++++||||||+
T Consensus 283 ~GS~~~--~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~ 360 (463)
T 2acv_A 283 FGSMGV--SFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGW 360 (463)
T ss_dssp CCSSCC--CCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCH
T ss_pred eccccc--cCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCc
Confidence 999973 4577889999999999899999999874 2322 1 00 358899999999999999999999999999
Q ss_pred ccHHHHHHcCcceEeeccccCcHHHHHHH-HHcCcEEEe-c---cC--CCCHHHHHHHHHHhc-C-HHHHHHHHHHHHHH
Q psy14941 369 LGITEAVYEGIPVLGIPVFGDQWANIKKL-ESLKAGKLL-P---YL--EITEETVSDALKIVL-S-PEYKENAEDLGTRF 439 (513)
Q Consensus 369 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~-~~~G~G~~l-~---~~--~~~~~~l~~ai~~ll-~-~~y~~~a~~~~~~~ 439 (513)
||++||+++|||||++|+++||+.||+++ +++|+|+.+ + .. .++.++|.++|+++| + ++||+||+++++.+
T Consensus 361 ~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~ 440 (463)
T 2acv_A 361 NSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMS 440 (463)
T ss_dssp HHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHH
T ss_pred hhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999995 899999999 3 34 689999999999999 4 79999999999998
Q ss_pred hc
Q psy14941 440 RD 441 (513)
Q Consensus 440 ~~ 441 (513)
++
T Consensus 441 ~~ 442 (463)
T 2acv_A 441 RN 442 (463)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 8
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.3e-41 Score=346.34 Aligned_cols=396 Identities=16% Similarity=0.210 Sum_probs=272.4
Q ss_pred CceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCcc-ccCCeEEEEecCcccchhhHHHHHhhchhHHHHHH
Q psy14941 26 CSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETLV-HYERMKVLDIKGTHTYNSTIEDIYELSADSIKRIH 104 (513)
Q Consensus 26 ~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (513)
..||| +++.++.||++|++.||++|++|||+|+++++...... ...+++++.++.. ...... ....... ....
T Consensus 12 ~~~Il-~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~-~~~~~~~-~~~~-- 85 (424)
T 2iya_A 12 PRHIS-FFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAGATPVVYDSI-LPKESN-PEESWPE-DQES-- 85 (424)
T ss_dssp CCEEE-EECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCEEEECCCC-SCCTTC-TTCCCCS-SHHH--
T ss_pred cceEE-EEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEecCcc-cccccc-chhhcch-hHHH--
Confidence 36899 67999999999999999999999999999998765322 1335677666421 111100 0000000 0000
Q ss_pred HHHHHHHHH-HHHHhCCHhHHHHhccCCCccEEEEccchhchHHhhhhccCCCEEEEeCCCCchhhh-hhcCCCCCCC--
Q psy14941 105 INFIDQEIQ-VENIFLHENMKSIWNMENKYDLIITEMFLTDAFLVIPYLYKVPYISIASSTLHPQHS-ERLGLPDNPS-- 180 (513)
Q Consensus 105 ~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~Dlvi~d~~~~~~~~~~a~~l~iP~i~~~~~~~~~~~~-~~~g~p~~~s-- 180 (513)
....... +.... +.+.+.++ +.+||+||+|.+..++. .+|+.+|||++.+++.+...... ...+...++.
T Consensus 86 --~~~~~~~~~~~~~--~~l~~~l~-~~~pD~VI~d~~~~~~~-~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (424)
T 2iya_A 86 --AMGLFLDEAVRVL--PQLEDAYA-DDRPDLIVYDIASWPAP-VLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTAD 159 (424)
T ss_dssp --HHHHHHHHHHHHH--HHHHHHTT-TSCCSEEEEETTCTHHH-HHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC-
T ss_pred --HHHHHHHHHHHHH--HHHHHHHh-ccCCCEEEEcCcccHHH-HHHHhcCCCEEEEecccccccccccccccccccccc
Confidence 1011111 22221 45677777 68999999998766666 59999999999988766422111 0000000000
Q ss_pred -----ccCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCHHhhhcCccEEEEeccCccCCC
Q psy14941 181 -----YIPSYVSAYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRIQDLLNTCSLTLVNTHHTINIA 255 (513)
Q Consensus 181 -----~~P~~~~~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~s~~~l~~~ 255 (513)
..|. ...+...+..+... ... +. ...++.+++ +|..+...+....++.+++++.+.++.+
T Consensus 160 ~~~~~~~~~---~~~~~~~~~~~~~~---------~~~-~~-~~~~~~~~~-~g~~~~~~~~~~~~~~~l~~~~~~l~~~ 224 (424)
T 2iya_A 160 RGEEAAAPA---GTGDAEEGAEAEDG---------LVR-FF-TRLSAFLEE-HGVDTPATEFLIAPNRCIVALPRTFQIK 224 (424)
T ss_dssp -----------------------HHH---------HHH-HH-HHHHHHHHH-TTCCSCHHHHHHCCSSEEESSCTTTSTT
T ss_pred ccccccccc---ccccchhhhccchh---------HHH-HH-HHHHHHHHH-cCCCCCHHHhccCCCcEEEEcchhhCCC
Confidence 0010 00011111111000 000 00 223333333 3432334445446788999999999988
Q ss_pred -ccCCCceEEeCcccccCCCCCcHHHHHHhhcC-CCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCC-
Q psy14941 256 -RPLPANVVEIGGIHVKPAKKLNEEMERFLNES-HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDND- 332 (513)
Q Consensus 256 -~p~~p~~~~vG~l~~~~~~~l~~~l~~~l~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 332 (513)
.++++++.+|||+..... +..+|++.. ++++|||++||.. ....+.+..+++++++.+.+++|.+++..
T Consensus 225 ~~~~~~~~~~vGp~~~~~~-----~~~~~~~~~~~~~~v~v~~Gs~~---~~~~~~~~~~~~al~~~~~~~~~~~g~~~~ 296 (424)
T 2iya_A 225 GDTVGDNYTFVGPTYGDRS-----HQGTWEGPGDGRPVLLIALGSAF---TDHLDFYRTCLSAVDGLDWHVVLSVGRFVD 296 (424)
T ss_dssp GGGCCTTEEECCCCCCCCG-----GGCCCCCCCSSCCEEEEECCSSS---CCCHHHHHHHHHHHTTCSSEEEEECCTTSC
T ss_pred ccCCCCCEEEeCCCCCCcc-----cCCCCCccCCCCCEEEEEcCCCC---cchHHHHHHHHHHHhcCCcEEEEEECCcCC
Confidence 557789999998653211 112455433 6799999999997 35678899999999888889999887532
Q ss_pred ---CCCCCCCCcEEEecCCCccccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccC
Q psy14941 333 ---TSIFKPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYL 409 (513)
Q Consensus 333 ---~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~ 409 (513)
+.+ . ++|+++.+|+||.++| +++++||||||+||++||+++|||+|++|.+.||+.||+++++.|+|+.++.+
T Consensus 297 ~~~~~~-~-~~~v~~~~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~ 372 (424)
T 2iya_A 297 PADLGE-V-PPNVEVHQWVPQLDIL--TKASAFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRD 372 (424)
T ss_dssp GGGGCS-C-CTTEEEESSCCHHHHH--TTCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGG
T ss_pred hHHhcc-C-CCCeEEecCCCHHHHH--hhCCEEEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcC
Confidence 233 5 7899999999999999 67899999999999999999999999999999999999999999999999877
Q ss_pred CCCHHHHHHHHHHhc-CHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHhCC
Q psy14941 410 EITEETVSDALKIVL-SPEYKENAEDLGTRFRDRPQSPLEVAIYWIEYVIKYNG 462 (513)
Q Consensus 410 ~~~~~~l~~ai~~ll-~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~~~~~~~ 462 (513)
+++.++|.++|++++ |++|+++++++++.+++. ++.++++++||.+++..|
T Consensus 373 ~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~ 424 (424)
T 2iya_A 373 QVTAEKLREAVLAVASDPGVAERLAAVRQEIREA--GGARAAADILEGILAEAG 424 (424)
T ss_dssp GCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTS--CHHHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHhccC
Confidence 889999999999999 999999999999999886 899999999999887643
No 9
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=9.4e-42 Score=344.62 Aligned_cols=367 Identities=14% Similarity=0.133 Sum_probs=231.7
Q ss_pred ccCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCccccCCeEEEEecC-cccchhhHH---HHHhhchhH
Q psy14941 24 QQCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETLVHYERMKVLDIKG-THTYNSTIE---DIYELSADS 99 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~---~~~~~~~~~ 99 (513)
.++.||| ++++|+.||++|+++||++|++|||+||+++++........++.++.+.. .+....... .........
T Consensus 20 ~~~MRIL-~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (400)
T 4amg_A 20 FQSMRAL-FITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAEAGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSE 98 (400)
T ss_dssp -CCCEEE-EECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHTTTCEEEESSTTCCSHHHHSCCC----------
T ss_pred CCCCeEE-EECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHhcCCeeEecCCchhHhhhccccccccccccchh
Confidence 4668999 88999999999999999999999999999998655433134566666531 111110000 000000000
Q ss_pred HHHHHHHHHHHHHH-HHHHhCCHhHHHHhccCCCccEEEEccchhchHHhhhhccCCCEEEEeCCCCchhhhhhcCCCCC
Q psy14941 100 IKRIHINFIDQEIQ-VENIFLHENMKSIWNMENKYDLIITEMFLTDAFLVIPYLYKVPYISIASSTLHPQHSERLGLPDN 178 (513)
Q Consensus 100 ~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~Dlvi~d~~~~~~~~~~a~~l~iP~i~~~~~~~~~~~~~~~g~p~~ 178 (513)
...... ....... +... ...+.+.++ +.+||+||+|.+..++.+ +|+.+|||++.+...+...
T Consensus 99 ~~~~~~-~~~~~~~~~~~~--~~~l~~~~~-~~~pD~Vv~d~~~~~~~~-~A~~~gip~~~~~~~~~~~----------- 162 (400)
T 4amg_A 99 GLGEGF-FAEMFARVSAVA--VDGALRTAR-SWRPDLVVHTPTQGAGPL-TAAALQLPCVELPLGPADS----------- 162 (400)
T ss_dssp --CHHH-HHHHHHHHHHHH--HHHHHHHHH-HHCCSEEEECTTCTHHHH-HHHHTTCCEEECCSSTTTC-----------
T ss_pred hhhHHH-HHHHHHHHHHHH--HHHHHHHHH-hcCCCEEEECcchHHHHH-HHHHcCCCceeeccccccc-----------
Confidence 000000 1111111 2211 134556666 578999999988777774 9999999988765432211
Q ss_pred CCccCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCHHhhhcCccEEEEeccCccCC--Cc
Q psy14941 179 PSYIPSYVSAYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRIQDLLNTCSLTLVNTHHTINI--AR 256 (513)
Q Consensus 179 ~s~~P~~~~~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~s~~~l~~--~~ 256 (513)
.| .+....... ..+..+++ +... ....+..+....+.... +.
T Consensus 163 ---~~----------~~~~~~~~~-----------------l~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~ 206 (400)
T 4amg_A 163 ---EP----------GLGALIRRA-----------------MSKDYERH-GVTG-----EPTGSVRLTTTPPSVEALLPE 206 (400)
T ss_dssp ---CH----------HHHHHHHHH-----------------THHHHHHT-TCCC-----CCSCEEEEECCCHHHHHTSCG
T ss_pred ---cc----------chhhHHHHH-----------------HHHHHHHh-CCCc-----ccccchhhcccCchhhccCcc
Confidence 00 011111110 11111221 2100 01112222222221111 11
Q ss_pred -cCCCceEEeCcccccCCCCCcHHHHHHhhcC-CCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCCC-
Q psy14941 257 -PLPANVVEIGGIHVKPAKKLNEEMERFLNES-HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDNDT- 333 (513)
Q Consensus 257 -p~~p~~~~vG~l~~~~~~~l~~~l~~~l~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~- 333 (513)
...+....+.+........++ +|++.. ++++||||+||.... ....+.+..+++++++.+.+++|..++.+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~v~vs~Gs~~~~-~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~ 281 (400)
T 4amg_A 207 DRRSPGAWPMRYVPYNGGAVLP----DWLPPAAGRRRIAVTLGSIDAL-SGGIAKLAPLFSEVADVDAEFVLTLGGGDLA 281 (400)
T ss_dssp GGCCTTCEECCCCCCCCCEECC----TTCSCCTTCCEEEECCCSCC---CCSSSTTHHHHHHGGGSSSEEEEECCTTCCC
T ss_pred cccCCcccCcccccccccccCc----ccccccCCCcEEEEeCCccccc-CccHHHHHHHHHHhhccCceEEEEecCcccc
Confidence 112222222222222222222 355544 789999999998642 223456788999999999999999877542
Q ss_pred --CCCCCCCcEEEecCCCccccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCC
Q psy14941 334 --SIFKPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEI 411 (513)
Q Consensus 334 --~~~~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~ 411 (513)
.. + ++|+++.+|+||.++| +++++||||||+||++||+++|||+|++|+++||+.||+++++.|+|+.++..+.
T Consensus 282 ~~~~-~-~~~v~~~~~~p~~~lL--~~~~~~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~~ 357 (400)
T 4amg_A 282 LLGE-L-PANVRVVEWIPLGALL--ETCDAIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGSL 357 (400)
T ss_dssp CCCC-C-CTTEEEECCCCHHHHH--TTCSEEEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTTTC
T ss_pred cccc-C-CCCEEEEeecCHHHHh--hhhhheeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCCCc
Confidence 33 6 8999999999999999 7789999999999999999999999999999999999999999999999987666
Q ss_pred CHHHHHHHHHHhc-CHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q psy14941 412 TEETVSDALKIVL-SPEYKENAEDLGTRFRDRPQSPLEVAIYWIEYVI 458 (513)
Q Consensus 412 ~~~~l~~ai~~ll-~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~~~ 458 (513)
++ ++|+++| |++||++|+++++.++++| +.+.+++++|.++
T Consensus 358 ~~----~al~~lL~d~~~r~~a~~l~~~~~~~~--~~~~~a~~le~lA 399 (400)
T 4amg_A 358 GA----EQCRRLLDDAGLREAALRVRQEMSEMP--PPAETAAXLVALA 399 (400)
T ss_dssp SH----HHHHHHHHCHHHHHHHHHHHHHHHTSC--CHHHHHHHHHHHC
T ss_pred hH----HHHHHHHcCHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHhh
Confidence 65 5677899 9999999999999999985 5677889999763
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.5e-40 Score=335.83 Aligned_cols=375 Identities=17% Similarity=0.140 Sum_probs=270.1
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCcc-ccCCeEEEEecCc-ccchhh-HHHHHhhchhHHHHH
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETLV-HYERMKVLDIKGT-HTYNST-IEDIYELSADSIKRI 103 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~~-~~~~~~~i~~~~~-~~~~~~-~~~~~~~~~~~~~~~ 103 (513)
.||+ +++.++.||++|+.+||++|++|||+|+++++...... +..++.++.++.. ...... ......... .+.
T Consensus 1 MrIl-i~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~-- 76 (404)
T 3h4t_A 1 MGVL-ITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAE-VVT-- 76 (404)
T ss_dssp -CEE-EEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGG-GHH--
T ss_pred CeEE-EEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCCceeecCCCHHHHhccccCCHHHHHH-HHH--
Confidence 3788 66778899999999999999999999999998654332 1356777776522 111000 000000000 000
Q ss_pred HHHHHHHHHHHHHHhCCHhHHHHhccCCCccEEEEccchhchH--HhhhhccCCCEEEEeCCCCchhhhhhcCCCCCCCc
Q psy14941 104 HINFIDQEIQVENIFLHENMKSIWNMENKYDLIITEMFLTDAF--LVIPYLYKVPYISIASSTLHPQHSERLGLPDNPSY 181 (513)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~Dlvi~d~~~~~~~--~~~a~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~ 181 (513)
.. ....+ ..+.+.+ .+||+||+|.....+. ..+|+.+|||++.+...+...
T Consensus 77 -----~~---~~~~~--~~l~~~~---~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~-------------- 129 (404)
T 3h4t_A 77 -----EV---VAEWF--DKVPAAI---EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHL-------------- 129 (404)
T ss_dssp -----HH---HHHHH--HHHHHHH---TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS--------------
T ss_pred -----HH---HHHHH--HHHHHHh---cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccC--------------
Confidence 00 00000 1233333 2599999987655442 348999999999888755321
Q ss_pred cCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCC--CCCHHhhhcCccEEEEeccCccCCCccCC
Q psy14941 182 IPSYVSAYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPE--IPRIQDLLNTCSLTLVNTHHTINIARPLP 259 (513)
Q Consensus 182 ~P~~~~~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~l~~s~~~l~~~~p~~ 259 (513)
|... + ....+..+...+ .. .....++. ++.+|. .+...+.. ..+..+.+.++.+.+.++.+
T Consensus 130 -~~~~--~----~~~~~~~~~~~~-------~~-~~~~~~~~-~~~lgl~~~~~~~~~~-~~~~~l~~~~~~l~p~~~~~ 192 (404)
T 3h4t_A 130 -PSEQ--S----QAERDMYNQGAD-------RL-FGDAVNSH-RASIGLPPVEHLYDYG-YTDQPWLAADPVLSPLRPTD 192 (404)
T ss_dssp -GGGS--C----HHHHHHHHHHHH-------HH-HHHHHHHH-HHHTTCCCCCCHHHHH-HCSSCEECSCTTTSCCCTTC
T ss_pred -CChh--H----HHHHHHHHHHHH-------HH-hHHHHHHH-HHHcCCCCCcchhhcc-ccCCeEEeeCcceeCCCCCC
Confidence 1100 0 111122222111 00 11223333 334554 23333321 13456778888888777777
Q ss_pred CceEEeCcccccCCCCCcHHHHHHhhcCCCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCCC--CCCC
Q psy14941 260 ANVVEIGGIHVKPAKKLNEEMERFLNESHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDNDT--SIFK 337 (513)
Q Consensus 260 p~~~~vG~l~~~~~~~l~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~ 337 (513)
++++++|++..+...++++++.+|++. ++++|||++||.. . +.+.+..+++++++.+.+++|..++.+. .+ .
T Consensus 193 ~~~~~~G~~~~~~~~~~~~~l~~~l~~-~~~~Vlv~~Gs~~---~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~-~ 266 (404)
T 3h4t_A 193 LGTVQTGAWILPDQRPLSAELEGFLRA-GSPPVYVGFGSGP---A-PAEAARVAIEAVRAQGRRVVLSSGWAGLGRID-E 266 (404)
T ss_dssp CSCCBCCCCCCCCCCCCCHHHHHHHHT-SSCCEEECCTTSC---C-CTTHHHHHHHHHHHTTCCEEEECTTTTCCCSS-C
T ss_pred CCeEEeCccccCCCCCCCHHHHHHHhc-CCCeEEEECCCCC---C-cHHHHHHHHHHHHhCCCEEEEEeCCccccccc-C
Confidence 899999988776667889999999985 6899999999997 2 6788999999999999999999886543 23 5
Q ss_pred CCCcEEEecCCCccccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHH
Q psy14941 338 PYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVS 417 (513)
Q Consensus 338 ~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~ 417 (513)
++|+++.+|+||.++| +++++||||||.||+.||+++|+|+|++|.++||+.||.++++.|+|+.++..+++.++|.
T Consensus 267 -~~~v~~~~~~~~~~ll--~~~d~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~ 343 (404)
T 3h4t_A 267 -GDDCLVVGEVNHQVLF--GRVAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLS 343 (404)
T ss_dssp -CTTEEEESSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHH
T ss_pred -CCCEEEecCCCHHHHH--hhCcEEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHH
Confidence 8899999999999999 8899999999999999999999999999999999999999999999999998889999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHhC
Q psy14941 418 DALKIVLSPEYKENAEDLGTRFRDRPQSPLEVAIYWIEYVIKYN 461 (513)
Q Consensus 418 ~ai~~ll~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~~~~~~ 461 (513)
++|+++++++|+++|+++++.+.+ ++.++++++||++++.+
T Consensus 344 ~ai~~ll~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~ 384 (404)
T 3h4t_A 344 AALATALTPGIRARAAAVAGTIRT---DGTTVAAKLLLEAISRQ 384 (404)
T ss_dssp HHHHHHTSHHHHHHHHHHHTTCCC---CHHHHHHHHHHHHHHC-
T ss_pred HHHHHHhCHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHhhC
Confidence 999999988899999999999876 79999999999998764
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=6.1e-38 Score=318.30 Aligned_cols=379 Identities=16% Similarity=0.201 Sum_probs=265.4
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCcc-ccCCeEEEEecCcccchhhHHHHHhhchhHHHHHHH
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETLV-HYERMKVLDIKGTHTYNSTIEDIYELSADSIKRIHI 105 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (513)
.||| +++.++.||++|+++||++|++|||+|+++++...... ...++.+..++........... ..... ....
T Consensus 21 ~rIl-~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~-~~~~--- 94 (415)
T 3rsc_A 21 AHLL-IVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAGATVVPYQSEIIDADAAEV-FGSDD-LGVR--- 94 (415)
T ss_dssp CEEE-EECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCSTTTCCHHHH-HHSSS-SCHH---
T ss_pred CEEE-EEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhcCCEEEeccccccccccchh-hcccc-HHHH---
Confidence 6898 77888999999999999999999999999997654332 1356777776521100000000 00000 1111
Q ss_pred HHHHHHHH-HHHHhCCHhHHHHhccCCCccEEEEc-cchhchHHhhhhccCCCEEEEeCCCCchhhhhhcCCCCCCCccC
Q psy14941 106 NFIDQEIQ-VENIFLHENMKSIWNMENKYDLIITE-MFLTDAFLVIPYLYKVPYISIASSTLHPQHSERLGLPDNPSYIP 183 (513)
Q Consensus 106 ~~~~~~~~-~~~~~~~~~l~~~l~~~~~~Dlvi~d-~~~~~~~~~~a~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P 183 (513)
+...... ....+ +.+.+.++ +.+||+||+| ....++. .+|+.+|||++.+.+...... .+.+
T Consensus 95 -~~~~~~~~~~~~~--~~l~~~l~-~~~PDlVi~d~~~~~~~~-~aA~~~giP~v~~~~~~~~~~-----------~~~~ 158 (415)
T 3rsc_A 95 -PHLMYLRENVSVL--RATAEALD-GDVPDLVLYDDFPFIAGQ-LLAARWRRPAVRLSAAFASNE-----------HYSF 158 (415)
T ss_dssp -HHHHHHHHHHHHH--HHHHHHHS-SSCCSEEEEESTTHHHHH-HHHHHTTCCEEEEESSCCCCS-----------SCCH
T ss_pred -HHHHHHHHHHHHH--HHHHHHHh-ccCCCEEEECchhhhHHH-HHHHHhCCCEEEEEecccccC-----------cccc
Confidence 1000011 11111 45677787 7899999999 6655555 489999999998875443110 0100
Q ss_pred --cccCCC-CCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCHHhhhcCc-cEEEEeccCccCCCcc-C
Q psy14941 184 --SYVSAY-TDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRIQDLLNTC-SLTLVNTHHTINIARP-L 258 (513)
Q Consensus 184 --~~~~~~-~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~l~~s~~~l~~~~p-~ 258 (513)
...... .....++.+.. ...++..+ .+|..+......... +..+....+.+++++. .
T Consensus 159 ~~~~~~~~~~~~p~~~~~~~-----------------~~~~~~~~-~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 220 (415)
T 3rsc_A 159 SQDMVTLAGTIDPLDLPVFR-----------------DTLRDLLA-EHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTF 220 (415)
T ss_dssp HHHHHHHHTCCCGGGCHHHH-----------------HHHHHHHH-HTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGC
T ss_pred ccccccccccCChhhHHHHH-----------------HHHHHHHH-HcCCCCChhhhhcCCCCeEEEEcCcccCCCcccC
Confidence 000000 00000011111 11222222 334333334444444 8888888888888755 4
Q ss_pred CCceEEeCcccccCCCCCcHHHHHHhhc-CCCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCC-C---C
Q psy14941 259 PANVVEIGGIHVKPAKKLNEEMERFLNE-SHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDN-D---T 333 (513)
Q Consensus 259 ~p~~~~vG~l~~~~~~~l~~~l~~~l~~-~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~---~ 333 (513)
+.++.++|+...... +..+|... .++++||+++||.. ....+.+..+++++.+.+.+++|.+++. + +
T Consensus 221 ~~~~~~vGp~~~~~~-----~~~~~~~~~~~~~~v~v~~Gs~~---~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~l 292 (415)
T 3rsc_A 221 DDRFVFVGPCFDDRR-----FLGEWTRPADDLPVVLVSLGTTF---NDRPGFFRDCARAFDGQPWHVVMTLGGQVDPAAL 292 (415)
T ss_dssp CTTEEECCCCCCCCG-----GGCCCCCCSSCCCEEEEECTTTS---CCCHHHHHHHHHHHTTSSCEEEEECTTTSCGGGG
T ss_pred CCceEEeCCCCCCcc-----cCcCccccCCCCCEEEEECCCCC---CChHHHHHHHHHHHhcCCcEEEEEeCCCCChHHh
Confidence 677999998764321 11223322 26899999999986 3456789999999999999999988764 1 3
Q ss_pred CCCCCCCcEEEecCCCccccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCH
Q psy14941 334 SIFKPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITE 413 (513)
Q Consensus 334 ~~~~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~ 413 (513)
.+ . ++|+++.+|+|+.++| +.++++|||||.||++||+++|+|+|++|...||+.||.++++.|+|+.+..++++.
T Consensus 293 ~~-~-~~~v~~~~~~~~~~ll--~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~ 368 (415)
T 3rsc_A 293 GD-L-PPNVEAHRWVPHVKVL--EQATVCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADG 368 (415)
T ss_dssp CC-C-CTTEEEESCCCHHHHH--HHEEEEEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCH
T ss_pred cC-C-CCcEEEEecCCHHHHH--hhCCEEEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCH
Confidence 34 5 7899999999999999 779999999999999999999999999999999999999999999999999888999
Q ss_pred HHHHHHHHHhc-CHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q psy14941 414 ETVSDALKIVL-SPEYKENAEDLGTRFRDRPQSPLEVAIYWIEYVIK 459 (513)
Q Consensus 414 ~~l~~ai~~ll-~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~~~~ 459 (513)
++|.++|++++ |++++++++++++.+.+. ++.++++++||.+++
T Consensus 369 ~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 369 DTLLAAVGAVAADPALLARVEAMRGHVRRA--GGAARAADAVEAYLA 413 (415)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHS--CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHhh
Confidence 99999999999 999999999999999987 899999999998875
No 12
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.5e-37 Score=312.10 Aligned_cols=365 Identities=14% Similarity=0.127 Sum_probs=253.7
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCcc-ccCCeEEEEecCcccchhhHHH----HHhhchhHHH
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETLV-HYERMKVLDIKGTHTYNSTIED----IYELSADSIK 101 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~ 101 (513)
.||| +++.++.||++|+.+|+++|+++||+|+++++...... ...++.++.++... ..+.... ..+..+....
T Consensus 1 MrIl-~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 78 (384)
T 2p6p_A 1 MRIL-FVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGVGLPAVATTDLP-IRHFITTDREGRPEAIPSDPV 78 (384)
T ss_dssp CEEE-EECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEESCSSC-HHHHHHBCTTSCBCCCCCSHH
T ss_pred CEEE-EEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhCCCEEEEeCCcc-hHHHHhhhcccCccccCcchH
Confidence 3898 56788899999999999999999999999998654221 13466676664221 1111000 0000000000
Q ss_pred HHHHHH-HHHHHH-HHHHhCCHhHHHHhccCCCccEEEEccchhchHHhhhhccCCCEEEEeCCCCchhhhhhcCCCCCC
Q psy14941 102 RIHINF-IDQEIQ-VENIFLHENMKSIWNMENKYDLIITEMFLTDAFLVIPYLYKVPYISIASSTLHPQHSERLGLPDNP 179 (513)
Q Consensus 102 ~~~~~~-~~~~~~-~~~~~~~~~l~~~l~~~~~~Dlvi~d~~~~~~~~~~a~~l~iP~i~~~~~~~~~~~~~~~g~p~~~ 179 (513)
.... + ..+... +... ...+.+.++ +.+||+||+|.+..++. .+|+.+|||++.+...+. .
T Consensus 79 ~~~~-~~~~~~~~~~~~~--~~~l~~~l~-~~~pD~Vi~~~~~~~~~-~~a~~~giP~v~~~~~~~------------~- 140 (384)
T 2p6p_A 79 AQAR-FTGRWFARMAASS--LPRMLDFSR-AWRPDLIVGGTMSYVAP-LLALHLGVPHARQTWDAV------------D- 140 (384)
T ss_dssp HHHH-HHHHHHHHHHHHH--HHHHHHHHH-HHCCSEEEEETTCTHHH-HHHHHHTCCEEEECCSSC------------C-
T ss_pred HHHH-HHHHHHHhhHHHH--HHHHHHHHh-ccCCcEEEECcchhhHH-HHHHhcCCCEEEeccCCc------------c-
Confidence 0000 1 111111 2221 235566666 57899999998755555 489999999988764221 0
Q ss_pred CccCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCHHhhhcCccEEEEeccCccCCCccCC
Q psy14941 180 SYIPSYVSAYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRIQDLLNTCSLTLVNTHHTINIARPLP 259 (513)
Q Consensus 180 s~~P~~~~~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~s~~~l~~~~p~~ 259 (513)
+ + .+.++.. +..++..+ .+|. +. ...++.+++++.+.++.+++.+
T Consensus 141 ---~---~------~~~~~~~-----------------~~~~~~~~-~~g~-~~----~~~~~~~l~~~~~~~~~~~~~~ 185 (384)
T 2p6p_A 141 ---A---D------GIHPGAD-----------------AELRPELS-ELGL-ER----LPAPDLFIDICPPSLRPANAAP 185 (384)
T ss_dssp ---C---T------TTHHHHH-----------------HHTHHHHH-HTTC-SS----CCCCSEEEECSCGGGSCTTSCC
T ss_pred ---c---c------hhhHHHH-----------------HHHHHHHH-HcCC-CC----CCCCCeEEEECCHHHCCCCCCC
Confidence 0 0 0111111 11222222 2332 11 1126789999999998776543
Q ss_pred -CceEEeCcccccCCCCCcHHHHHHhhc-CCCceEEEEeCcccccCCC--CHHHHHHHHHHHhcCCCeEEEEEcCCC---
Q psy14941 260 -ANVVEIGGIHVKPAKKLNEEMERFLNE-SHNGVIYFSMGSMLKTSSF--PPDKFKAFLKAFSKIPQRVLWKFEDND--- 332 (513)
Q Consensus 260 -p~~~~vG~l~~~~~~~l~~~l~~~l~~-~~~~~v~vs~Gs~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~--- 332 (513)
+++.+++. .. +.++.+|++. .++++||+++||......+ +.+.+..+++++.+.+.+++|+.++.+
T Consensus 186 ~~~~~~~~~---~~----~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~ 258 (384)
T 2p6p_A 186 ARMMRHVAT---SR----QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEA 258 (384)
T ss_dssp CEECCCCCC---CC----CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHHHHH
T ss_pred CCceEecCC---CC----CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCCHHh
Confidence 23444431 11 1234457765 3568999999999732101 456788999999988889999887532
Q ss_pred CCCCCCCCcEEEecCCCccccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCC
Q psy14941 333 TSIFKPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEIT 412 (513)
Q Consensus 333 ~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~ 412 (513)
+.+ . ++|+.+ +|+||.++| +++++||||||.||++||+++|+|+|++|..+||..||.++++.|+|+.++.++++
T Consensus 259 l~~-~-~~~v~~-~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~ 333 (384)
T 2p6p_A 259 LRA-E-VPQARV-GWTPLDVVA--PTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDS 333 (384)
T ss_dssp HHH-H-CTTSEE-ECCCHHHHG--GGCSEEEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCC
T ss_pred hCC-C-CCceEE-cCCCHHHHH--hhCCEEEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCC
Confidence 223 5 789999 999999999 88999999999999999999999999999999999999999999999999877889
Q ss_pred HHHHHHHHHHhc-CHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHh
Q psy14941 413 EETVSDALKIVL-SPEYKENAEDLGTRFRDRPQSPLEVAIYWIEYVIKY 460 (513)
Q Consensus 413 ~~~l~~ai~~ll-~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~~~~~ 460 (513)
.++|.++|++++ |++|+++++++++.+++. ++.+++++|||.++.|
T Consensus 334 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~ 380 (384)
T 2p6p_A 334 TEAIADSCQELQAKDTYARRAQDLSREISGM--PLPATVVTALEQLAHH 380 (384)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHTS--CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHhhh
Confidence 999999999999 999999999999999988 7899999999999876
No 13
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=8.3e-37 Score=308.47 Aligned_cols=378 Identities=14% Similarity=0.188 Sum_probs=263.2
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCcc-ccCCeEEEEecCc-ccchhhHHHHHhhchhHHHHHH
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETLV-HYERMKVLDIKGT-HTYNSTIEDIYELSADSIKRIH 104 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~~-~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 104 (513)
.||| +++.++.||++|++.||++|++|||+|+++++...... ...++.+..++.. +..... . ..........+
T Consensus 5 ~~il-~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~- 79 (402)
T 3ia7_A 5 RHIL-FANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGAEVVLYKSEFDTFHVP-E--VVKQEDAETQL- 79 (402)
T ss_dssp CEEE-EECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHTTCEEEECCCGGGTSSSS-S--SSCCTTHHHHH-
T ss_pred CEEE-EEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcCCEEEeccccccccccc-c--cccccchHHHH-
Confidence 4898 77888999999999999999999999999998553322 1356777766521 100000 0 00000111111
Q ss_pred HHHHHHHHH-HHHHhCCHhHHHHhccCCCccEEEEc-cchhchHHhhhhccCCCEEEEeCCCCchhhhhhcCCCCCCCcc
Q psy14941 105 INFIDQEIQ-VENIFLHENMKSIWNMENKYDLIITE-MFLTDAFLVIPYLYKVPYISIASSTLHPQHSERLGLPDNPSYI 182 (513)
Q Consensus 105 ~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~Dlvi~d-~~~~~~~~~~a~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~ 182 (513)
...... ....+ +.+.+.++ +.+||+||+| ....++. .+|+.+|||++.+.+....... +.
T Consensus 80 ---~~~~~~~~~~~~--~~l~~~l~-~~~pD~Vi~d~~~~~~~~-~aA~~~giP~v~~~~~~~~~~~-----------~~ 141 (402)
T 3ia7_A 80 ---HLVYVRENVAIL--RAAEEALG-DNPPDLVVYDVFPFIAGR-LLAARWDRPAVRLTGGFAANEH-----------YS 141 (402)
T ss_dssp ---HHHHHHHHHHHH--HHHHHHHT-TCCCSEEEEESTTHHHHH-HHHHHHTCCEEEEESSCCCBTT-----------BC
T ss_pred ---HHHHHHHHHHHH--HHHHHHHh-ccCCCEEEECchHHHHHH-HHHHhhCCCEEEEecccccCcc-----------cc
Confidence 000111 11111 45677787 7899999999 6655565 4899999999988754432110 00
Q ss_pred C--cccC--CCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCHHhhhcCc-cEEEEeccCccCCCcc
Q psy14941 183 P--SYVS--AYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRIQDLLNTC-SLTLVNTHHTINIARP 257 (513)
Q Consensus 183 P--~~~~--~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~l~~s~~~l~~~~p 257 (513)
+ .... ....+ ..+.+.. ...++.. +.+|..+....+.... +..+....+.++.+..
T Consensus 142 ~~~~~~~~~~~~~~-~~~~~~~-----------------~~~~~~~-~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 202 (402)
T 3ia7_A 142 LFKELWKSNGQRHP-ADVEAVH-----------------SVLVDLL-GKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAE 202 (402)
T ss_dssp HHHHHHHHHTCCCG-GGSHHHH-----------------HHHHHHH-HTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGG
T ss_pred ccccccccccccCh-hhHHHHH-----------------HHHHHHH-HHcCCCCChhhhhcCCCCeEEEEcChHhCCccc
Confidence 0 0000 00000 0001110 1122222 2234333334444444 7788888888887755
Q ss_pred -CCCceEEeCcccccCCCCCcHHHHHHhhc-CCCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCC---
Q psy14941 258 -LPANVVEIGGIHVKPAKKLNEEMERFLNE-SHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDND--- 332 (513)
Q Consensus 258 -~~p~~~~vG~l~~~~~~~l~~~l~~~l~~-~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--- 332 (513)
.+.++.++|+...... +..+|... .++++||+++||.. ....+.+..+++++.+.+.+++|.+++..
T Consensus 203 ~~~~~~~~vGp~~~~~~-----~~~~~~~~~~~~~~v~v~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 274 (402)
T 3ia7_A 203 TFDERFAFVGPTLTGRD-----GQPGWQPPRPDAPVLLVSLGNQF---NEHPEFFRACAQAFADTPWHVVMAIGGFLDPA 274 (402)
T ss_dssp GCCTTEEECCCCCCC---------CCCCCSSTTCCEEEEECCSCS---SCCHHHHHHHHHHHTTSSCEEEEECCTTSCGG
T ss_pred cCCCCeEEeCCCCCCcc-----cCCCCcccCCCCCEEEEECCCCC---cchHHHHHHHHHHHhcCCcEEEEEeCCcCChh
Confidence 4678999998754321 11223322 26799999999997 34567899999999998889999887642
Q ss_pred -CCCCCCCCcEEEecCCCccccccCCCceEEeccCCcccHHHHHHcCcceEeecc-ccCcHHHHHHHHHcCcEEEeccCC
Q psy14941 333 -TSIFKPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPV-FGDQWANIKKLESLKAGKLLPYLE 410 (513)
Q Consensus 333 -~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~-~~DQ~~na~~~~~~G~G~~l~~~~ 410 (513)
+.+ . ++|+++.+|+|+.++| +.++++|||||.||+.||+++|+|+|++|. ..||..||.++++.|+|+.++.++
T Consensus 275 ~~~~-~-~~~v~~~~~~~~~~ll--~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~ 350 (402)
T 3ia7_A 275 VLGP-L-PPNVEAHQWIPFHSVL--AHARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQ 350 (402)
T ss_dssp GGCS-C-CTTEEEESCCCHHHHH--TTEEEEEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGG
T ss_pred hhCC-C-CCcEEEecCCCHHHHH--hhCCEEEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCC
Confidence 334 5 7899999999999999 779999999999999999999999999999 999999999999999999999888
Q ss_pred CCHHHHHHHHHHhc-CHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHh
Q psy14941 411 ITEETVSDALKIVL-SPEYKENAEDLGTRFRDRPQSPLEVAIYWIEYVIKY 460 (513)
Q Consensus 411 ~~~~~l~~ai~~ll-~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~~~~~ 460 (513)
++.++|.+++.+++ |++++++++++++.+.+. ++.+++++.+|.+++.
T Consensus 351 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 351 LEPASIREAVERLAADSAVRERVRRMQRDILSS--GGPARAADEVEAYLGR 399 (402)
T ss_dssp CSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTS--CHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhC--ChHHHHHHHHHHHHhh
Confidence 89999999999999 999999999999999887 8999999999998754
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=2e-37 Score=316.73 Aligned_cols=393 Identities=15% Similarity=0.168 Sum_probs=250.2
Q ss_pred ccCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCcc-ccCCeEEEEecCcccchhhHH----HH------
Q psy14941 24 QQCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETLV-HYERMKVLDIKGTHTYNSTIE----DI------ 92 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~----~~------ 92 (513)
....||| +++.++.||++|+++||++|+++||+|+++++...... ...+++++.++......+... ..
T Consensus 18 ~~~mrIl-~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 96 (441)
T 2yjn_A 18 GSHMRVV-FSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAGLTAVPVGTDVDLVDFMTHAGHDIIDYVRS 96 (441)
T ss_dssp -CCCEEE-EECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTTTCCEEECSCCCCHHHHHHHTTHHHHHHHTT
T ss_pred CCccEEE-EEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhCCCceeecCCccchHHHhhhhhccccccccc
Confidence 4557999 55889999999999999999999999999998665322 145677877753211111110 01
Q ss_pred Hhh----ch-hHHHHHHHHHHHHHHH-HHHHhC----CHhHHHHhccCCCccEEEEccchhchHHhhhhccCCCEEEEeC
Q psy14941 93 YEL----SA-DSIKRIHINFIDQEIQ-VENIFL----HENMKSIWNMENKYDLIITEMFLTDAFLVIPYLYKVPYISIAS 162 (513)
Q Consensus 93 ~~~----~~-~~~~~~~~~~~~~~~~-~~~~~~----~~~l~~~l~~~~~~Dlvi~d~~~~~~~~~~a~~l~iP~i~~~~ 162 (513)
.+. .. ..+..+.. ....... +...+. ..++.+.++ +.+||+||+|....++. .+|+.+|||++.+..
T Consensus 97 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~pDlVv~d~~~~~~~-~aA~~lgiP~v~~~~ 173 (441)
T 2yjn_A 97 LDFSERDPATLTWEHLLG-MQTVLTPTFYALMSPDTLIEGMVSFCR-KWRPDLVIWEPLTFAAP-IAAAVTGTPHARLLW 173 (441)
T ss_dssp CCCTTCCGGGGSHHHHHH-HHHHHHHHTTTTSSCHHHHHHHHHHHH-HHCCSEEEECTTCTHHH-HHHHHHTCCEEEECS
T ss_pred ccccccCcchhhhhhhhh-HHHHHHHHHHhhcchHHHHHHHHHHHH-hcCCCEEEecCcchhHH-HHHHHcCCCEEEEec
Confidence 000 00 01111111 1111111 111011 133445555 57899999998755555 599999999988854
Q ss_pred CCCchhhhhhcCCCCCCCccCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCHHhhhcCcc
Q psy14941 163 STLHPQHSERLGLPDNPSYIPSYVSAYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRIQDLLNTCS 242 (513)
Q Consensus 163 ~~~~~~~~~~~g~p~~~s~~P~~~~~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (513)
.+..... ...+.+..+++.|.. .+++++.+. ..+..++ ++..+...++. ..+
T Consensus 174 ~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~~-----------------l~~~~~~-~g~~~~~~~~~-~~~ 225 (441)
T 2yjn_A 174 GPDITTR-ARQNFLGLLPDQPEE--------HREDPLAEW-----------------LTWTLEK-YGGPAFDEEVV-VGQ 225 (441)
T ss_dssp SCCHHHH-HHHHHHHHGGGSCTT--------TCCCHHHHH-----------------HHHHHHH-TTCCCCCGGGT-SCS
T ss_pred CCCcchh-hhhhhhhhccccccc--------cccchHHHH-----------------HHHHHHH-cCCCCCCcccc-CCC
Confidence 3321100 000000001111110 011122221 1112222 22101111222 345
Q ss_pred EEEEeccCccCCCccCCC-ceEEeCcccccCCCCCcHHHHHHhhcC-CCceEEEEeCcccccCCCCHHHHHHHHHHHhcC
Q psy14941 243 LTLVNTHHTINIARPLPA-NVVEIGGIHVKPAKKLNEEMERFLNES-HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKI 320 (513)
Q Consensus 243 l~l~~s~~~l~~~~p~~p-~~~~vG~l~~~~~~~l~~~l~~~l~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~ 320 (513)
..+.++.+.++.+..++. .+.+++ ... +.++.+|++.. ++++|||++||.........+.+..+++++.+.
T Consensus 226 ~~l~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~ 298 (441)
T 2yjn_A 226 WTIDPAPAAIRLDTGLKTVGMRYVD---YNG----PSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDV 298 (441)
T ss_dssp SEEECSCGGGSCCCCCCEEECCCCC---CCS----SCCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTS
T ss_pred eEEEecCccccCCCCCCCCceeeeC---CCC----CcccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcC
Confidence 667666666665433221 222222 111 12234677643 578999999998731001345677888899888
Q ss_pred CCeEEEEEcCCCC---CCCCCCCcEEEecCCCccccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHH
Q psy14941 321 PQRVLWKFEDNDT---SIFKPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKL 397 (513)
Q Consensus 321 ~~~~i~~~~~~~~---~~~~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~ 397 (513)
+.+++|..++.+. .+ . ++|+++.+|+||.++| +++++||||||.||++||+++|+|+|++|..+||..||.++
T Consensus 299 ~~~~v~~~g~~~~~~l~~-~-~~~v~~~~~~~~~~ll--~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l 374 (441)
T 2yjn_A 299 DAEIIATFDAQQLEGVAN-I-PDNVRTVGFVPMHALL--PTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRT 374 (441)
T ss_dssp SSEEEECCCTTTTSSCSS-C-CSSEEECCSCCHHHHG--GGCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH
T ss_pred CCEEEEEECCcchhhhcc-C-CCCEEEecCCCHHHHH--hhCCEEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHH
Confidence 8899999886543 23 5 7899999999999999 99999999999999999999999999999999999999999
Q ss_pred HHcCcEEEeccCCCCHHHHHHHHHHhc-CHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHhC
Q psy14941 398 ESLKAGKLLPYLEITEETVSDALKIVL-SPEYKENAEDLGTRFRDRPQSPLEVAIYWIEYVIKYN 461 (513)
Q Consensus 398 ~~~G~G~~l~~~~~~~~~l~~ai~~ll-~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~~~~~~ 461 (513)
++.|+|+.++.++++.++|.++|++++ |++|+++|+++++.+.+. ++.+++++.||.+++.+
T Consensus 375 ~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~ 437 (441)
T 2yjn_A 375 QEFGAGIALPVPELTPDQLRESVKRVLDDPAHRAGAARMRDDMLAE--PSPAEVVGICEELAAGR 437 (441)
T ss_dssp HHHTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTS--CCHHHHHHHHHHHHHC-
T ss_pred HHcCCEEEcccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHcC--CCHHHHHHHHHHHHHhc
Confidence 999999999988899999999999999 999999999999999987 78999999999988653
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=8.8e-36 Score=303.82 Aligned_cols=381 Identities=15% Similarity=0.179 Sum_probs=262.6
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCcc-ccCCeEEEEecCc-ccchhhHHHHHhhchhHHHHHH
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETLV-HYERMKVLDIKGT-HTYNSTIEDIYELSADSIKRIH 104 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~~-~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 104 (513)
.||| +++.++.||++|+..++++|+++||+|+++++...... ...++.++.++.. +....... ........
T Consensus 8 ~kIl-~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~--- 80 (430)
T 2iyf_A 8 AHIA-MFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGPRPVLYHSTLPGPDADPE---AWGSTLLD--- 80 (430)
T ss_dssp CEEE-EECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTTSCEEEECCCCSCCTTSCGG---GGCSSHHH---
T ss_pred ceEE-EEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEEcCCcCcccccccc---ccchhhHH---
Confidence 5899 67888999999999999999999999999998664322 1346777766521 10000000 00000100
Q ss_pred HHHHHHHHH-HHHHhCCHhHHHHhccCCCccEEEEccchhchHHhhhhccCCCEEEEeCCCCchhhhhhcCCCCCCCccC
Q psy14941 105 INFIDQEIQ-VENIFLHENMKSIWNMENKYDLIITEMFLTDAFLVIPYLYKVPYISIASSTLHPQHSERLGLPDNPSYIP 183 (513)
Q Consensus 105 ~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~Dlvi~d~~~~~~~~~~a~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P 183 (513)
....... +... ...+.+.++ +.+||+||+|....++. .+|+.+|||+|.+.+......... + .+
T Consensus 81 --~~~~~~~~~~~~--~~~l~~~l~-~~~pD~Vi~d~~~~~~~-~~A~~~giP~v~~~~~~~~~~~~~--~-------~~ 145 (430)
T 2iyf_A 81 --NVEPFLNDAIQA--LPQLADAYA-DDIPDLVLHDITSYPAR-VLARRWGVPAVSLSPNLVAWKGYE--E-------EV 145 (430)
T ss_dssp --HHHHHHHHHHHH--HHHHHHHHT-TSCCSEEEEETTCHHHH-HHHHHHTCCEEEEESSCCCCTTHH--H-------HT
T ss_pred --HHHHHHHHHHHH--HHHHHHHhh-ccCCCEEEECCccHHHH-HHHHHcCCCEEEEecccccccccc--c-------cc
Confidence 1011111 2222 245677787 68999999998755555 489999999998886543110000 0 00
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCHHhhhcCccEEEEeccCccCCC-ccCCCc-
Q psy14941 184 SYVSAYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRIQDLLNTCSLTLVNTHHTINIA-RPLPAN- 261 (513)
Q Consensus 184 ~~~~~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~s~~~l~~~-~p~~p~- 261 (513)
. ..++++..+... ... + ....++.+++ +|..++..+....++.+++++.+.++.+ .+++++
T Consensus 146 ~--------~~~~~~~~~~~~------~~~-~-~~~~~~~~~~-~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 208 (430)
T 2iyf_A 146 A--------EPMWREPRQTER------GRA-Y-YARFEAWLKE-NGITEHPDTFASHPPRSLVLIPKALQPHADRVDEDV 208 (430)
T ss_dssp H--------HHHHHHHHHSHH------HHH-H-HHHHHHHHHH-TTCCSCHHHHHHCCSSEEECSCGGGSTTGGGSCTTT
T ss_pred c--------cchhhhhccchH------HHH-H-HHHHHHHHHH-hCCCCCHHHHhcCCCcEEEeCcHHhCCCcccCCCcc
Confidence 0 011223222100 000 0 0223444443 3433344445446788999999999887 456678
Q ss_pred eEEeCcccccCCCCCcHHHHHHhhc-CCCceEEEEeCcccccCCCCHHHHHHHHHHHhcC-CCeEEEEEcCCC----CCC
Q psy14941 262 VVEIGGIHVKPAKKLNEEMERFLNE-SHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKI-PQRVLWKFEDND----TSI 335 (513)
Q Consensus 262 ~~~vG~l~~~~~~~l~~~l~~~l~~-~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~----~~~ 335 (513)
++++|+...... . ..+|... .++++||+++||.. ....+.+..+++++++. +.+++|.+++.. +.+
T Consensus 209 v~~vG~~~~~~~-~----~~~~~~~~~~~~~v~v~~Gs~~---~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~~ 280 (430)
T 2iyf_A 209 YTFVGACQGDRA-E----EGGWQRPAGAEKVVLVSLGSAF---TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGE 280 (430)
T ss_dssp EEECCCCC----------CCCCCCCTTCSEEEEEECTTTC---C-CHHHHHHHHHHHTTCTTEEEEEECC---CGGGGCS
T ss_pred EEEeCCcCCCCC-C----CCCCccccCCCCeEEEEcCCCC---CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHhcc
Confidence 999997432211 0 1123332 25789999999997 35678899999999886 668888887532 234
Q ss_pred CCCCCcEEEecCCCccccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHH
Q psy14941 336 FKPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEET 415 (513)
Q Consensus 336 ~~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~ 415 (513)
. ++|+.+.+|+||.++| +.+++||+|||.||++||+++|+|+|++|..+||..||.++++.|+|+.++.++++.++
T Consensus 281 -~-~~~v~~~~~~~~~~~l--~~ad~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~ 356 (430)
T 2iyf_A 281 -L-PDNVEVHDWVPQLAIL--RQADLFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADL 356 (430)
T ss_dssp -C-CTTEEEESSCCHHHHH--TTCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHH
T ss_pred -C-CCCeEEEecCCHHHHh--hccCEEEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHH
Confidence 5 7899999999999999 67899999999999999999999999999999999999999999999999887889999
Q ss_pred HHHHHHHhc-CHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHh
Q psy14941 416 VSDALKIVL-SPEYKENAEDLGTRFRDRPQSPLEVAIYWIEYVIKY 460 (513)
Q Consensus 416 l~~ai~~ll-~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~~~~~ 460 (513)
|.++|.+++ |+++++++.+.++.+.+. .+.+.++++++.+++.
T Consensus 357 l~~~i~~ll~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~ 400 (430)
T 2iyf_A 357 LRETALALVDDPEVARRLRRIQAEMAQE--GGTRRAADLIEAELPA 400 (430)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHH--CHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHhhc
Confidence 999999999 999999999999998876 7899999999988754
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.2e-34 Score=290.44 Aligned_cols=367 Identities=14% Similarity=0.159 Sum_probs=227.1
Q ss_pred ccCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCcc-ccCCeEEEEecCcccchhhHHHHHh-----hch
Q psy14941 24 QQCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETLV-HYERMKVLDIKGTHTYNSTIEDIYE-----LSA 97 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~ 97 (513)
....||| +++.++.||++++.+|+++|++|||+|+++++...... ...++.++.++.............. ...
T Consensus 13 ~~~MrIl-~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (398)
T 4fzr_A 13 GSHMRIL-VIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAGLPFAPTCPSLDMPEVLSWDREGNRTTMPR 91 (398)
T ss_dssp --CCEEE-EECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHTTCCEEEEESSCCHHHHHSBCTTSCBCCCCS
T ss_pred CCceEEE-EEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhCCCeeEecCCccchHhhhhhhccCccccccc
Confidence 3457999 66667899999999999999999999999998654322 1345666665421111111000000 000
Q ss_pred hHHHHHHHHHHHHHHH-HHHHhCCHhHHHHhccCCCccEEEEccchhchHHhhhhccCCCEEEEeCCCCchhhhhhcCCC
Q psy14941 98 DSIKRIHINFIDQEIQ-VENIFLHENMKSIWNMENKYDLIITEMFLTDAFLVIPYLYKVPYISIASSTLHPQHSERLGLP 176 (513)
Q Consensus 98 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~Dlvi~d~~~~~~~~~~a~~l~iP~i~~~~~~~~~~~~~~~g~p 176 (513)
........ ....... ....+ ..+.+.++ +.+||+|++|.....+. .+|+.+|||++.+........
T Consensus 92 ~~~~~~~~-~~~~~~~~~~~~~--~~l~~~~~-~~~pDlVv~d~~~~~~~-~~a~~~giP~v~~~~~~~~~~-------- 158 (398)
T 4fzr_A 92 EEKPLLEH-IGRGYGRLVLRMR--DEALALAE-RWKPDLVLTETYSLTGP-LVAATLGIPWIEQSIRLASPE-------- 158 (398)
T ss_dssp SHHHHHHH-HHHHHHHHHHHHH--HHHHHHHH-HHCCSEEEEETTCTHHH-HHHHHHTCCEEEECCSSCCCH--------
T ss_pred chhhHHHH-HHHHHHHHHHHHH--HHHHHHHH-hCCCCEEEECccccHHH-HHHHhhCCCEEEeccCCCCch--------
Confidence 00000111 1111111 22121 35667776 67899999997656566 488999999987765321110
Q ss_pred CCCCccCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCHHhhhcCccEEEEeccCccCCCc
Q psy14941 177 DNPSYIPSYVSAYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRIQDLLNTCSLTLVNTHHTINIAR 256 (513)
Q Consensus 177 ~~~s~~P~~~~~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~s~~~l~~~~ 256 (513)
.+..... .......++ ++. +. ....+..+....+.++.+.
T Consensus 159 -----------------~~~~~~~-----------------~~l~~~~~~-~~~-~~----~~~~~~~~~~~~~~~~~~~ 198 (398)
T 4fzr_A 159 -----------------LIKSAGV-----------------GELAPELAE-LGL-TD----FPDPLLSIDVCPPSMEAQP 198 (398)
T ss_dssp -----------------HHHHHHH-----------------HHTHHHHHT-TTC-SS----CCCCSEEEECSCGGGC---
T ss_pred -----------------hhhHHHH-----------------HHHHHHHHH-cCC-CC----CCCCCeEEEeCChhhCCCC
Confidence 0000000 001112222 221 11 1234566666666666542
Q ss_pred cC-CCceEEeCcccccCCCCCcHHHHHHhhcC-CCceEEEEeCcccccCCC-----CHHHHHHHHHHHhcCCCeEEEEEc
Q psy14941 257 PL-PANVVEIGGIHVKPAKKLNEEMERFLNES-HNGVIYFSMGSMLKTSSF-----PPDKFKAFLKAFSKIPQRVLWKFE 329 (513)
Q Consensus 257 p~-~p~~~~vG~l~~~~~~~l~~~l~~~l~~~-~~~~v~vs~Gs~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~ 329 (513)
.. ...+.+++... . +.++.+|+... ++++||+++||....... ..+.+..+++++.+.+.+++|..+
T Consensus 199 ~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~ 272 (398)
T 4fzr_A 199 KPGTTKMRYVPYNG--R----NDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVS 272 (398)
T ss_dssp -CCCEECCCCCCCC--S----SCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCC
T ss_pred CCCCCCeeeeCCCC--C----CCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeC
Confidence 11 11122332110 1 12233455443 679999999999642110 346688999999998889999888
Q ss_pred CCC---CCCCCCCCcEEEecCCCccccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEe
Q psy14941 330 DND---TSIFKPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLL 406 (513)
Q Consensus 330 ~~~---~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l 406 (513)
+.. +.+ + ++|+++.+|+|+.++| +.+++||||||.||+.||+++|+|+|++|..+||..|+.++++.|+|+.+
T Consensus 273 ~~~~~~l~~-~-~~~v~~~~~~~~~~ll--~~ad~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~ 348 (398)
T 4fzr_A 273 DKLAQTLQP-L-PEGVLAAGQFPLSAIM--PACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEV 348 (398)
T ss_dssp C---------C-CTTEEEESCCCHHHHG--GGCSEEEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEEC
T ss_pred Ccchhhhcc-C-CCcEEEeCcCCHHHHH--hhCCEEEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec
Confidence 743 334 6 8999999999999999 67999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHHHhc-CHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q psy14941 407 PYLEITEETVSDALKIVL-SPEYKENAEDLGTRFRDRPQSPLEVAIYWIEY 456 (513)
Q Consensus 407 ~~~~~~~~~l~~ai~~ll-~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~ 456 (513)
+.++++.++|.++|.+++ |++|++++++.++.+.+. .+.+++++.+|.
T Consensus 349 ~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 397 (398)
T 4fzr_A 349 PWEQAGVESVLAACARIRDDSSYVGNARRLAAEMATL--PTPADIVRLIEQ 397 (398)
T ss_dssp C-------CHHHHHHHHHHCTHHHHHHHHHHHHHTTS--CCHHHHHHHHTC
T ss_pred CcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHcC--CCHHHHHHHHhc
Confidence 988889999999999999 999999999999999988 678888887763
No 17
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=5e-33 Score=279.84 Aligned_cols=367 Identities=14% Similarity=0.166 Sum_probs=239.7
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCcc-ccCCeEEEEe-cCcccchhhHHHH-------Hhhch
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETLV-HYERMKVLDI-KGTHTYNSTIEDI-------YELSA 97 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~~-~~~~~~~i~~-~~~~~~~~~~~~~-------~~~~~ 97 (513)
.||| ++..++.||++++..|+++|+++||+|+++++...... ...++.++.+ ............. .....
T Consensus 2 MrIl-~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (391)
T 3tsa_A 2 MRVL-VVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGAGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQRD 80 (391)
T ss_dssp CEEE-EECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHBTCEEEEC--------------CCSCCGGGGCTT
T ss_pred cEEE-EEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhCCCceeeecCCccchhhhhhhccccccccccccc
Confidence 5899 55667899999999999999999999999997543221 1345666655 2111000000000 00000
Q ss_pred -hHHHHHHHHHHHHHHH-HHHH-hCCHhHHHHhccCCCccEEEEccchhchHHhhhhccCCCEEEEeCCCCchhhhhhcC
Q psy14941 98 -DSIKRIHINFIDQEIQ-VENI-FLHENMKSIWNMENKYDLIITEMFLTDAFLVIPYLYKVPYISIASSTLHPQHSERLG 174 (513)
Q Consensus 98 -~~~~~~~~~~~~~~~~-~~~~-~~~~~l~~~l~~~~~~Dlvi~d~~~~~~~~~~a~~l~iP~i~~~~~~~~~~~~~~~g 174 (513)
...... +...... ++.+ -....+.+.++ +.+||+|++|.....+.+ +|+.+|||++.+.......
T Consensus 81 ~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~-~~~PD~Vv~~~~~~~~~~-aa~~~giP~v~~~~~~~~~------- 148 (391)
T 3tsa_A 81 TEAGRQL---WEQTASNVAQSSLDQLPEYLRLAE-AWRPSVLLVDVCALIGRV-LGGLLDLPVVLHRWGVDPT------- 148 (391)
T ss_dssp SHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH-HHCCSEEEEETTCHHHHH-HHHHTTCCEEEECCSCCCT-------
T ss_pred chhHHHH---HHHHHHHHhhcchhhHHHHHHHHH-hcCCCEEEeCcchhHHHH-HHHHhCCCEEEEecCCccc-------
Confidence 000000 0000000 0000 00145667776 678999999976555664 8899999988876433210
Q ss_pred CCCCCCccCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCHHhhhcCccEEEEeccCccCC
Q psy14941 175 LPDNPSYIPSYVSAYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRIQDLLNTCSLTLVNTHHTINI 254 (513)
Q Consensus 175 ~p~~~s~~P~~~~~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~s~~~l~~ 254 (513)
.. .+...... ......++ ++. +. ....+..+..+.+.++.
T Consensus 149 --------~~---------~~~~~~~~-----------------~~~~~~~~-~~~-~~----~~~~~~~~~~~~~~~~~ 188 (391)
T 3tsa_A 149 --------AG---------PFSDRAHE-----------------LLDPVCRH-HGL-TG----LPTPELILDPCPPSLQA 188 (391)
T ss_dssp --------TT---------HHHHHHHH-----------------HHHHHHHH-TTS-SS----SCCCSEEEECSCGGGSC
T ss_pred --------cc---------cccchHHH-----------------HHHHHHHH-cCC-CC----CCCCceEEEecChhhcC
Confidence 00 00111111 01112222 221 00 12236667777777766
Q ss_pred Ccc-CCCceEEeCcccccCCCCCcHHHHHHhhcC-CCceEEEEeCcccccCCCCHHHHHHHHHHHhcC-CCeEEEEEcCC
Q psy14941 255 ARP-LPANVVEIGGIHVKPAKKLNEEMERFLNES-HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKI-PQRVLWKFEDN 331 (513)
Q Consensus 255 ~~p-~~p~~~~vG~l~~~~~~~l~~~l~~~l~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 331 (513)
+.. ....+.+++ .. .... +.+|+... ++++|++++||.......+.+.++.++++ .+. +.+++|..++.
T Consensus 189 ~~~~~~~~~~~~p-~~--~~~~----~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~ 260 (391)
T 3tsa_A 189 SDAPQGAPVQYVP-YN--GSGA----FPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPE 260 (391)
T ss_dssp TTSCCCEECCCCC-CC--CCEE----CCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGG
T ss_pred CCCCccCCeeeec-CC--CCcC----CCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCc
Confidence 532 111223331 11 1111 22354432 67899999999853212347788999999 888 45999988764
Q ss_pred C---CCCCCCCCcEEEecCCCccccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEecc
Q psy14941 332 D---TSIFKPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPY 408 (513)
Q Consensus 332 ~---~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~ 408 (513)
. +.+ . ++|+++.+|+|+.+++ +++++||||||.||++||+++|+|+|++|...||..|+.++++.|+|+.++.
T Consensus 261 ~~~~l~~-~-~~~v~~~~~~~~~~ll--~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~ 336 (391)
T 3tsa_A 261 HRALLTD-L-PDNARIAESVPLNLFL--RTCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPD 336 (391)
T ss_dssp GGGGCTT-C-CTTEEECCSCCGGGTG--GGCSEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCS
T ss_pred chhhccc-C-CCCEEEeccCCHHHHH--hhCCEEEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCc
Confidence 3 444 6 8899999999999999 9999999999999999999999999999999999999999999999999987
Q ss_pred --CCCCHHHHHHHHHHhc-CHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHh
Q psy14941 409 --LEITEETVSDALKIVL-SPEYKENAEDLGTRFRDRPQSPLEVAIYWIEYVIKY 460 (513)
Q Consensus 409 --~~~~~~~l~~ai~~ll-~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~~~~~ 460 (513)
++.+.+.|.+++.+++ |++|+++++++++.+.+. ++.+++++++|.+++.
T Consensus 337 ~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~ 389 (391)
T 3tsa_A 337 EQAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITAM--PHPAALVRTLENTAAI 389 (391)
T ss_dssp HHHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHTS--CCHHHHHHHHHHC---
T ss_pred ccccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHcC--CCHHHHHHHHHHHHhc
Confidence 6789999999999999 999999999999999988 7789999999987653
No 18
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=3.1e-33 Score=281.97 Aligned_cols=357 Identities=14% Similarity=0.158 Sum_probs=238.5
Q ss_pred CceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCcc-ccCCeEEEEecCcccchhhHHHHHh-h--------
Q psy14941 26 CSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETLV-HYERMKVLDIKGTHTYNSTIEDIYE-L-------- 95 (513)
Q Consensus 26 ~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~-~-------- 95 (513)
..||| +++.++.||++|+.+||++|.++||+|+++++ ..... ...++.++.++.............. .
T Consensus 20 ~MrIl-~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (398)
T 3oti_A 20 HMRVL-FVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAETVA 97 (398)
T ss_dssp CCEEE-EECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTTTCEEEESSTTCCHHHHHHHHHHHCHHHHHTGG
T ss_pred cCEEE-EEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhCCCeeEecCCccCHHHHhhhcccCCcccccccc
Confidence 36999 66667899999999999999999999999998 43222 1456777776532211111100000 0
Q ss_pred --chhHHHHHHHHHHHHHHH-HHHHhCCHhHHHHhccCCCccEEEEccchhchHHhhhhccCCCEEEEeCCCCchhhhhh
Q psy14941 96 --SADSIKRIHINFIDQEIQ-VENIFLHENMKSIWNMENKYDLIITEMFLTDAFLVIPYLYKVPYISIASSTLHPQHSER 172 (513)
Q Consensus 96 --~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~Dlvi~d~~~~~~~~~~a~~l~iP~i~~~~~~~~~~~~~~ 172 (513)
....... ....... ... ....+.+.++ +.+||+|++|.....+.+ +|+.+|||++.+.......
T Consensus 98 ~~~~~~~~~----~~~~~~~~~~~--~~~~l~~~l~-~~~pDlVv~d~~~~~~~~-aA~~~giP~v~~~~~~~~~----- 164 (398)
T 3oti_A 98 TRPAIDLEE----WGVQIAAVNRP--LVDGTMALVD-DYRPDLVVYEQGATVGLL-AADRAGVPAVQRNQSAWRT----- 164 (398)
T ss_dssp GSCCCSGGG----GHHHHHHHHGG--GHHHHHHHHH-HHCCSEEEEETTCHHHHH-HHHHHTCCEEEECCTTCCC-----
T ss_pred CChhhhHHH----HHHHHHHHHHH--HHHHHHHHHH-HcCCCEEEECchhhHHHH-HHHHcCCCEEEEeccCCCc-----
Confidence 0000000 0011111 111 1245667776 678999999977666664 8999999988765332100
Q ss_pred cCCCCCCCccCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCHHhhhcCccEEEEeccCcc
Q psy14941 173 LGLPDNPSYIPSYVSAYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRIQDLLNTCSLTLVNTHHTI 252 (513)
Q Consensus 173 ~g~p~~~s~~P~~~~~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~s~~~l 252 (513)
..+...... ..+...++ ++. + ....+..+....+.+
T Consensus 165 --------------------~~~~~~~~~-----------------~l~~~~~~-~~~-~-----~~~~~~~~~~~~~~~ 200 (398)
T 3oti_A 165 --------------------RGMHRSIAS-----------------FLTDLMDK-HQV-S-----LPEPVATIESFPPSL 200 (398)
T ss_dssp --------------------TTHHHHHHT-----------------TCHHHHHH-TTC-C-----CCCCSEEECSSCGGG
T ss_pred --------------------cchhhHHHH-----------------HHHHHHHH-cCC-C-----CCCCCeEEEeCCHHH
Confidence 001111100 01112222 221 1 122355666666666
Q ss_pred CCCcc-CCCceEEeCcccccCCCCCcHHHHHHhhc-CCCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcC
Q psy14941 253 NIARP-LPANVVEIGGIHVKPAKKLNEEMERFLNE-SHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFED 330 (513)
Q Consensus 253 ~~~~p-~~p~~~~vG~l~~~~~~~l~~~l~~~l~~-~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 330 (513)
..+.. ....+.++.. ..+ ....+|+.. .++++||+++||..... ...+.+..+++++.+.+.+++|..++
T Consensus 201 ~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~l~~~~~~~v~~~g~ 272 (398)
T 3oti_A 201 LLEAEPEGWFMRWVPY---GGG----AVLGDRLPPVPARPEVAITMGTIELQA-FGIGAVEPIIAAAGEVDADFVLALGD 272 (398)
T ss_dssp GTTSCCCSBCCCCCCC---CCC----EECCSSCCCCCSSCEEEECCTTTHHHH-HCGGGHHHHHHHHHTSSSEEEEECTT
T ss_pred CCCCCCCCCCccccCC---CCC----cCCchhhhcCCCCCEEEEEcCCCcccc-CcHHHHHHHHHHHHcCCCEEEEEECC
Confidence 65421 1111122210 111 111234432 26789999999996310 14567889999999888899999887
Q ss_pred CC---CCCCCCCCcEEEecCCCccccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHH--HHHHHcCcEEE
Q psy14941 331 ND---TSIFKPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANI--KKLESLKAGKL 405 (513)
Q Consensus 331 ~~---~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na--~~~~~~G~G~~ 405 (513)
.+ +.+ . ++|+.+.+|+|+.++| +.+++||||||.||++||+++|+|+|++|..+||..|| .++++.|+|+.
T Consensus 273 ~~~~~l~~-~-~~~v~~~~~~~~~~ll--~~ad~~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~ 348 (398)
T 3oti_A 273 LDISPLGT-L-PRNVRAVGWTPLHTLL--RTCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLV 348 (398)
T ss_dssp SCCGGGCS-C-CTTEEEESSCCHHHHH--TTCSEEEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEE
T ss_pred cChhhhcc-C-CCcEEEEccCCHHHHH--hhCCEEEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEe
Confidence 54 334 6 8899999999999999 77999999999999999999999999999999999999 99999999999
Q ss_pred eccCCCCHHHHHHHHHHhc-CHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q psy14941 406 LPYLEITEETVSDALKIVL-SPEYKENAEDLGTRFRDRPQSPLEVAIYWIEYVIK 459 (513)
Q Consensus 406 l~~~~~~~~~l~~ai~~ll-~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~~~~ 459 (513)
++..+.+.+.|. +++ |++|++++++.++.+.+. ++.+++++++|.+++
T Consensus 349 ~~~~~~~~~~l~----~ll~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~ 397 (398)
T 3oti_A 349 STSDKVDADLLR----RLIGDESLRTAAREVREEMVAL--PTPAETVRRIVERIS 397 (398)
T ss_dssp CCGGGCCHHHHH----HHHHCHHHHHHHHHHHHHHHTS--CCHHHHHHHHHHHHC
T ss_pred eCCCCCCHHHHH----HHHcCHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHhc
Confidence 987777887776 888 999999999999999988 778999999998764
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.97 E-value=1.1e-30 Score=264.52 Aligned_cols=374 Identities=14% Similarity=0.167 Sum_probs=247.2
Q ss_pred cCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCcc-ccCCeEEEEecCcccchhhHHHHH---hhch---
Q psy14941 25 QCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETLV-HYERMKVLDIKGTHTYNSTIEDIY---ELSA--- 97 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~---~~~~--- 97 (513)
...||| +++.++.||..++..|+++|+++||+|+++++...... ...++.++.++... ......... ....
T Consensus 19 ~~MrIl-~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 96 (412)
T 3otg_A 19 RHMRVL-FASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLGFEPVATGMPV-FDGFLAALRIRFDTDSPEG 96 (412)
T ss_dssp CSCEEE-EECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCCH-HHHHHHHHHHHHSCSCCTT
T ss_pred ceeEEE-EEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhcCCceeecCccc-ccchhhhhhhhhcccCCcc
Confidence 447999 56677899999999999999999999999998654221 13466676665210 001100000 0000
Q ss_pred -hHHHHHHHHHHHHHHHH-HHHhCCHhHHHHhccCCCccEEEEccchhchHHhhhhccCCCEEEEeCCCCchhhhhhcCC
Q psy14941 98 -DSIKRIHINFIDQEIQV-ENIFLHENMKSIWNMENKYDLIITEMFLTDAFLVIPYLYKVPYISIASSTLHPQHSERLGL 175 (513)
Q Consensus 98 -~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~Dlvi~d~~~~~~~~~~a~~l~iP~i~~~~~~~~~~~~~~~g~ 175 (513)
........ ........ .. .....+.+.++ +.+||+|++|.....+. .+|+.+|+|+|.........
T Consensus 97 ~~~~~~~~~-~~~~~~~~~~~-~~~~~l~~~l~-~~~pDvVv~~~~~~~~~-~aa~~~giP~v~~~~~~~~~-------- 164 (412)
T 3otg_A 97 LTPEQLSEL-PQIVFGRVIPQ-RVFDELQPVIE-RLRPDLVVQEISNYGAG-LAALKAGIPTICHGVGRDTP-------- 164 (412)
T ss_dssp CCHHHHTTS-HHHHHHTHHHH-HHHHHHHHHHH-HHCCSEEEEETTCHHHH-HHHHHHTCCEEEECCSCCCC--------
T ss_pred CChhHhhHH-HHHHHhccchH-HHHHHHHHHHH-hcCCCEEEECchhhHHH-HHHHHcCCCEEEecccccCc--------
Confidence 00000000 00000000 00 00135566676 57899999997655555 48899999988765432210
Q ss_pred CCCCCccCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCHHhhhcCccEEEEeccCccCCC
Q psy14941 176 PDNPSYIPSYVSAYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRIQDLLNTCSLTLVNTHHTINIA 255 (513)
Q Consensus 176 p~~~s~~P~~~~~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~s~~~l~~~ 255 (513)
+ ....++... .++...+ ++...........++.++..+...++.+
T Consensus 165 -------~----------~~~~~~~~~-----------------~~~~~~~-~g~~~~~~~~~~~~d~~i~~~~~~~~~~ 209 (412)
T 3otg_A 165 -------D----------DLTRSIEEE-----------------VRGLAQR-LGLDLPPGRIDGFGNPFIDIFPPSLQEP 209 (412)
T ss_dssp -------S----------HHHHHHHHH-----------------HHHHHHH-TTCCCCSSCCGGGGCCEEECSCGGGSCH
T ss_pred -------h----------hhhHHHHHH-----------------HHHHHHH-cCCCCCcccccCCCCeEEeeCCHHhcCC
Confidence 0 011111111 1112222 2321111111244677788777777654
Q ss_pred cc-CCCceEEeCcccccCCCCCcHHHHHH--hhcCCCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCC
Q psy14941 256 RP-LPANVVEIGGIHVKPAKKLNEEMERF--LNESHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDND 332 (513)
Q Consensus 256 ~p-~~p~~~~vG~l~~~~~~~l~~~l~~~--l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 332 (513)
.. .......+-...... +.+..+| ....++++|++++|+.. ....+.+..+++++.+.+.+++|..++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~vlv~~G~~~---~~~~~~~~~~~~~l~~~~~~~~~~~g~~~ 282 (412)
T 3otg_A 210 EFRARPRRHELRPVPFAE----QGDLPAWLSSRDTARPLVYLTLGTSS---GGTVEVLRAAIDGLAGLDADVLVASGPSL 282 (412)
T ss_dssp HHHTCTTEEECCCCCCCC----CCCCCGGGGGSCTTSCEEEEECTTTT---CSCHHHHHHHHHHHHTSSSEEEEECCSSC
T ss_pred cccCCCCcceeeccCCCC----CCCCCCccccccCCCCEEEEEcCCCC---cCcHHHHHHHHHHHHcCCCEEEEEECCCC
Confidence 31 111111111111111 1122234 22236789999999996 45678899999999988889999988744
Q ss_pred ----CCCCCCCCcEEEecCCCccccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEecc
Q psy14941 333 ----TSIFKPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPY 408 (513)
Q Consensus 333 ----~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~ 408 (513)
+.+ . ++|+.+.+|+|+.++| +.+++||+|||.+|++||+++|+|+|++|..+||..|+..+++.|.|..++.
T Consensus 283 ~~~~l~~-~-~~~v~~~~~~~~~~~l--~~ad~~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~ 358 (412)
T 3otg_A 283 DVSGLGE-V-PANVRLESWVPQAALL--PHVDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLP 358 (412)
T ss_dssp CCTTCCC-C-CTTEEEESCCCHHHHG--GGCSEEEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCG
T ss_pred Chhhhcc-C-CCcEEEeCCCCHHHHH--hcCcEEEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCc
Confidence 334 5 7899999999999999 7799999999999999999999999999999999999999999999999998
Q ss_pred CCCCHHHHHHHHHHhc-CHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHh
Q psy14941 409 LEITEETVSDALKIVL-SPEYKENAEDLGTRFRDRPQSPLEVAIYWIEYVIKY 460 (513)
Q Consensus 409 ~~~~~~~l~~ai~~ll-~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~~~~~ 460 (513)
++++.++|.++|.+++ |+++++++.+.++.+.+. .+.+++++.+|.+++.
T Consensus 359 ~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 359 DNISPDSVSGAAKRLLAEESYRAGARAVAAEIAAM--PGPDEVVRLLPGFASR 409 (412)
T ss_dssp GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHS--CCHHHHHTTHHHHHC-
T ss_pred ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHhcc
Confidence 8889999999999999 999999999999999887 6789999999888643
No 20
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.96 E-value=3.1e-29 Score=221.37 Aligned_cols=165 Identities=40% Similarity=0.725 Sum_probs=146.9
Q ss_pred CCCCcHHHHHHhhcC-CCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCcEEEecCCCcc
Q psy14941 273 AKKLNEEMERFLNES-HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDNDTSIFKPYKNIRTSSWMPQR 351 (513)
Q Consensus 273 ~~~l~~~l~~~l~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~nv~~~~~~pq~ 351 (513)
++++|+++.+|++.. ++++||+++||... ..+.+.+..+++++.+.+.+++|.+++..... + ++|+++.+|+||.
T Consensus 4 ~~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~--~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~-~-~~~v~~~~~~~~~ 79 (170)
T 2o6l_A 4 AKPLPKEMEDFVQSSGENGVVVFSLGSMVS--NMTEERANVIASALAQIPQKVLWRFDGNKPDT-L-GLNTRLYKWIPQN 79 (170)
T ss_dssp CCCCCHHHHHHHHTTTTTCEEEEECCSCCT--TCCHHHHHHHHHHHTTSSSEEEEECCSSCCTT-C-CTTEEEESSCCHH
T ss_pred CCCCCHHHHHHHHcCCCCCEEEEECCCCcc--cCCHHHHHHHHHHHHhCCCeEEEEECCcCccc-C-CCcEEEecCCCHH
Confidence 457899999999865 57899999999862 45788899999999988899999998765555 6 8899999999999
Q ss_pred ccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc-CHHHHH
Q psy14941 352 DIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-SPEYKE 430 (513)
Q Consensus 352 ~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-~~~y~~ 430 (513)
+++.|+++++||||||.+|++||+++|+|+|++|...||..||.++++.|+|+.++.++++.++|.++|.+++ |++|++
T Consensus 80 ~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~ 159 (170)
T 2o6l_A 80 DLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDPSYKE 159 (170)
T ss_dssp HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCHHHHH
T ss_pred HHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988889999999999999 999999
Q ss_pred HHHHHHHHHhc
Q psy14941 431 NAEDLGTRFRD 441 (513)
Q Consensus 431 ~a~~~~~~~~~ 441 (513)
+|+++++.+++
T Consensus 160 ~a~~~~~~~~~ 170 (170)
T 2o6l_A 160 NVMKLSRIQHD 170 (170)
T ss_dssp HHHHHC-----
T ss_pred HHHHHHHHhhC
Confidence 99999998864
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.96 E-value=1.2e-27 Score=237.36 Aligned_cols=333 Identities=13% Similarity=0.082 Sum_probs=212.8
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCcc---ccCCeEEEEecCcccchhhHHHHHhhchhHHHHH
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETLV---HYERMKVLDIKGTHTYNSTIEDIYELSADSIKRI 103 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (513)
.||| +...++.||++|+++||++|.+|||+|+|+++...-+. ...++.+..++........ .+..+
T Consensus 3 ~~i~-i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~----------~~~~~ 71 (365)
T 3s2u_A 3 GNVL-IMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKG----------LKSLV 71 (365)
T ss_dssp CEEE-EECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC-----------------------
T ss_pred CcEE-EEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCC----------HHHHH
Confidence 5888 66666669999999999999999999999987532111 1345555555432211100 00000
Q ss_pred HHHHHHHHHHHHHHhCCHhHHHHhccCCCccEEEEccchhch-HHhhhhccCCCEEEEeCCCCchhhhhhcCCCCCCCcc
Q psy14941 104 HINFIDQEIQVENIFLHENMKSIWNMENKYDLIITEMFLTDA-FLVIPYLYKVPYISIASSTLHPQHSERLGLPDNPSYI 182 (513)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~Dlvi~d~~~~~~-~~~~a~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~ 182 (513)
.. ...+ .... .+..++++ +.+||+||++..+... ...+|+.+|||++...... +
T Consensus 72 ~~-~~~~---~~~~---~~~~~~l~-~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~-----------------~ 126 (365)
T 3s2u_A 72 KA-PLEL---LKSL---FQALRVIR-QLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNA-----------------V 126 (365)
T ss_dssp -C-HHHH---HHHH---HHHHHHHH-HHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSS-----------------S
T ss_pred HH-HHHH---HHHH---HHHHHHHH-hcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecch-----------------h
Confidence 00 1110 0101 13445666 6789999998643322 2236888999988543210 1
Q ss_pred CcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCHHhhhcCccEEEEeccCccCCCccCCCce
Q psy14941 183 PSYVSAYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRIQDLLNTCSLTLVNTHHTINIARPLPANV 262 (513)
Q Consensus 183 P~~~~~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~s~~~l~~~~p~~p~~ 262 (513)
| +...| +.. +.++.++...... .+..++.
T Consensus 127 ~----------G~~nr------------------------~l~-------------~~a~~v~~~~~~~----~~~~~k~ 155 (365)
T 3s2u_A 127 A----------GTANR------------------------SLA-------------PIARRVCEAFPDT----FPASDKR 155 (365)
T ss_dssp C----------CHHHH------------------------HHG-------------GGCSEEEESSTTS----SCC---C
T ss_pred h----------hhHHH------------------------hhc-------------cccceeeeccccc----ccCcCcE
Confidence 1 11111 111 1123333322111 2233455
Q ss_pred EEeCcccccCCCCCcHHHHHHhhcCCCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCC----eEEEEEcCCCC-----
Q psy14941 263 VEIGGIHVKPAKKLNEEMERFLNESHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQ----RVLWKFEDNDT----- 333 (513)
Q Consensus 263 ~~vG~l~~~~~~~l~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~----- 333 (513)
.++|..........+.. ...++ .+++++++..||.. .....+.+.+++.+++. .++|.++..+.
T Consensus 156 ~~~g~pvr~~~~~~~~~-~~~~~-~~~~~ilv~gGs~g-----~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~ 228 (365)
T 3s2u_A 156 LTTGNPVRGELFLDAHA-RAPLT-GRRVNLLVLGGSLG-----AEPLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAE 228 (365)
T ss_dssp EECCCCCCGGGCCCTTS-SCCCT-TSCCEEEECCTTTT-----CSHHHHHHHHHHHTSCTTTCCEEEEECCTTTHHHHHH
T ss_pred EEECCCCchhhccchhh-hcccC-CCCcEEEEECCcCC-----ccccchhhHHHHHhcccccceEEEEecCccccccccc
Confidence 66664332210000000 00112 25678888888876 44566677788877642 67777776432
Q ss_pred --CCCCCCCcEEEecCCCcc-ccccCCCceEEeccCCcccHHHHHHcCcceEeeccc----cCcHHHHHHHHHcCcEEEe
Q psy14941 334 --SIFKPYKNIRTSSWMPQR-DIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVF----GDQWANIKKLESLKAGKLL 406 (513)
Q Consensus 334 --~~~~~~~nv~~~~~~pq~-~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~----~DQ~~na~~~~~~G~G~~l 406 (513)
.+ . +.|+.+.+|+++. +++ ..+|++|||+|.+|+.|++++|+|+|.+|.. .+|..||+.+++.|+|+.+
T Consensus 229 ~~~~-~-~~~~~v~~f~~dm~~~l--~~aDlvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l 304 (365)
T 3s2u_A 229 RYRT-V-AVEADVAPFISDMAAAY--AWADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLL 304 (365)
T ss_dssp HHHH-T-TCCCEEESCCSCHHHHH--HHCSEEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEEC
T ss_pred eecc-c-ccccccccchhhhhhhh--ccceEEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEe
Confidence 12 4 6789999999985 788 8899999999999999999999999999873 5899999999999999999
Q ss_pred ccCCCCHHHHHHHHHHhc-CHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q psy14941 407 PYLEITEETVSDALKIVL-SPEYKENAEDLGTRFRDRPQSPLEVAIYWIEYVIK 459 (513)
Q Consensus 407 ~~~~~~~~~l~~ai~~ll-~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~~~~ 459 (513)
+.+++|++.|.++|.+++ |++.++++.+-++.+... ++.++.++.|+.++|
T Consensus 305 ~~~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~~--~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 305 PQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKP--EATRTVVDACLEVAR 356 (365)
T ss_dssp CTTTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCCT--THHHHHHHHHHHHC-
T ss_pred ecCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCCc--cHHHHHHHHHHHHHc
Confidence 988999999999999999 999888888888877655 889999999999875
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.84 E-value=1.2e-19 Score=180.07 Aligned_cols=334 Identities=11% Similarity=0.086 Sum_probs=212.7
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCCc--c-ccCCeEEEEecCcccchhhHHHHHhhchhHHHHH
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPETL--V-HYERMKVLDIKGTHTYNSTIEDIYELSADSIKRI 103 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~--~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (513)
.|||++. .+..||..++..++++|+++||+|++++...... . ...++....++.......... ..... .+...
T Consensus 7 mkIl~~~-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~-~~~~~ 82 (364)
T 1f0k_A 7 KRLMVMA-GGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIK--ALIAA-PLRIF 82 (364)
T ss_dssp CEEEEEC-CSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHH--HHHTC-HHHHH
T ss_pred cEEEEEe-CCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCcCccH--HHHHH-HHHHH
Confidence 6899554 4445999999999999999999999999754311 1 023566665543322111000 00000 00000
Q ss_pred HHHHHHHHHHHHHHhCCHhHHHHhccCCCccEEEEccch--hchHHhhhhccCCCEEEEeCCCCchhhhhhcCCCCCCCc
Q psy14941 104 HINFIDQEIQVENIFLHENMKSIWNMENKYDLIITEMFL--TDAFLVIPYLYKVPYISIASSTLHPQHSERLGLPDNPSY 181 (513)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~Dlvi~d~~~--~~~~~~~a~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~ 181 (513)
.. ...+.+.++ +.+||+|+++... ..+. .+++..|+|+|.......
T Consensus 83 ~~--------------~~~l~~~l~-~~~pDvv~~~~~~~~~~~~-~~~~~~~~p~v~~~~~~~---------------- 130 (364)
T 1f0k_A 83 NA--------------WRQARAIMK-AYKPDVVLGMGGYVSGPGG-LAAWSLGIPVVLHEQNGI---------------- 130 (364)
T ss_dssp HH--------------HHHHHHHHH-HHCCSEEEECSSTTHHHHH-HHHHHTTCCEEEEECSSS----------------
T ss_pred HH--------------HHHHHHHHH-hcCCCEEEEeCCcCchHHH-HHHHHcCCCEEEEecCCC----------------
Confidence 00 123455665 5689999998643 2233 367788999885443110
Q ss_pred cCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCHHhhhcCccEEEEeccCccCCCccCCCc
Q psy14941 182 IPSYVSAYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRIQDLLNTCSLTLVNTHHTINIARPLPAN 261 (513)
Q Consensus 182 ~P~~~~~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~s~~~l~~~~p~~p~ 261 (513)
| .+..+ .+ .+.+|.+++.+... + |+
T Consensus 131 -~----------~~~~~------------------------~~-------------~~~~d~v~~~~~~~--~-----~~ 155 (364)
T 1f0k_A 131 -A----------GLTNK------------------------WL-------------AKIATKVMQAFPGA--F-----PN 155 (364)
T ss_dssp -C----------CHHHH------------------------HH-------------TTTCSEEEESSTTS--S-----SS
T ss_pred -C----------cHHHH------------------------HH-------------HHhCCEEEecChhh--c-----CC
Confidence 1 01100 00 12345666654433 1 24
Q ss_pred eEEeCccc-ccCCCCCcHHHHHHhhcCCCceEEEEeCcccccCCCCHHHHHHHHHHHhcCC--CeEEEEEcCCCCCC---
Q psy14941 262 VVEIGGIH-VKPAKKLNEEMERFLNESHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIP--QRVLWKFEDNDTSI--- 335 (513)
Q Consensus 262 ~~~vG~l~-~~~~~~l~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~--- 335 (513)
+..+|.-. .....+ +..-.++-...+++++++..|+.. +.+....+++++..+. .++++.+++....+
T Consensus 156 ~~~i~n~v~~~~~~~-~~~~~~~~~~~~~~~il~~~g~~~-----~~k~~~~li~a~~~l~~~~~~l~i~G~~~~~~l~~ 229 (364)
T 1f0k_A 156 AEVVGNPVRTDVLAL-PLPQQRLAGREGPVRVLVVGGSQG-----ARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQ 229 (364)
T ss_dssp CEECCCCCCHHHHTS-CCHHHHHTTCCSSEEEEEECTTTC-----CHHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHH
T ss_pred ceEeCCccchhhccc-chhhhhcccCCCCcEEEEEcCchH-----hHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHH
Confidence 55555321 110001 111122211124566777777775 4566677778877664 46677776644211
Q ss_pred ---CCCCCcEEEecCCCc-cccccCCCceEEeccCCcccHHHHHHcCcceEeeccc---cCcHHHHHHHHHcCcEEEecc
Q psy14941 336 ---FKPYKNIRTSSWMPQ-RDIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVF---GDQWANIKKLESLKAGKLLPY 408 (513)
Q Consensus 336 ---~~~~~nv~~~~~~pq-~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~---~DQ~~na~~~~~~G~G~~l~~ 408 (513)
..+.+||.+.+|+++ .+++ ..++++|+++|.+++.||+++|+|+|+.|.. .||..|+..+++.|.|..++.
T Consensus 230 ~~~~~~~~~v~~~g~~~~~~~~~--~~ad~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~ 307 (364)
T 1f0k_A 230 AYAEAGQPQHKVTEFIDDMAAAY--AWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQ 307 (364)
T ss_dssp HHHHTTCTTSEEESCCSCHHHHH--HHCSEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCG
T ss_pred HHhhcCCCceEEecchhhHHHHH--HhCCEEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCcEEEecc
Confidence 010258999999955 4788 7899999999989999999999999999987 799999999999999999987
Q ss_pred CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHhCC
Q psy14941 409 LEITEETVSDALKIVLSPEYKENAEDLGTRFRDRPQSPLEVAIYWIEYVIKYNG 462 (513)
Q Consensus 409 ~~~~~~~l~~ai~~ll~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~~~~~~~ 462 (513)
.+.+.+++.++|.++ |++.++++.+.+....++ .+.+.+++.++.+.+.-.
T Consensus 308 ~d~~~~~la~~i~~l-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 308 PQLSVDAVANTLAGW-SRETLLTMAERARAASIP--DATERVANEVSRVARALE 358 (364)
T ss_dssp GGCCHHHHHHHHHTC-CHHHHHHHHHHHHHTCCT--THHHHHHHHHHHHHTTC-
T ss_pred ccCCHHHHHHHHHhc-CHHHHHHHHHHHHHhhcc--CHHHHHHHHHHHHHHHHH
Confidence 777899999999999 999998888888777654 678888888888876533
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.58 E-value=4.4e-14 Score=133.04 Aligned_cols=133 Identities=14% Similarity=0.007 Sum_probs=98.4
Q ss_pred eEEeCcccccCCCCCcHHHHHHhhcC--CCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCCCC-----
Q psy14941 262 VVEIGGIHVKPAKKLNEEMERFLNES--HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDNDTS----- 334 (513)
Q Consensus 262 ~~~vG~l~~~~~~~l~~~l~~~l~~~--~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----- 334 (513)
....|+-.. ++.++..+.-... +.+.|+|++|+.. +......+++++.+.+ ++.+.++.....
T Consensus 132 ~~l~G~~Y~----~lR~eF~~~~~~~r~~~~~ILv~~GG~d-----~~~l~~~vl~~L~~~~-~i~vv~G~~~~~~~~l~ 201 (282)
T 3hbm_A 132 EVRCGFSYA----LIREEFYQEAKENRKKKYDFFICMGGTD-----IKNLSLQIASELPKTK-IISIATSSSNPNLKKLQ 201 (282)
T ss_dssp EEEESGGGC----CCCHHHHHHTTCCCCCCEEEEEECCSCC-----TTCHHHHHHHHSCTTS-CEEEEECTTCTTHHHHH
T ss_pred eEeeCCccc----ccCHHHHHhhhhccccCCeEEEEECCCc-----hhhHHHHHHHHhhcCC-CEEEEECCCchHHHHHH
Confidence 456776332 3455544332111 3568999999764 3446677888887654 465666653311
Q ss_pred C--CCCCCcEEEecCCCcc-ccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEecc
Q psy14941 335 I--FKPYKNIRTSSWMPQR-DIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPY 408 (513)
Q Consensus 335 ~--~~~~~nv~~~~~~pq~-~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~ 408 (513)
+ .. .+|+.+.+++++. +++ ..+|++||+|| +|++|+++.|+|+|.+|...+|..||+.+++.|+|+.+..
T Consensus 202 ~~~~~-~~~v~v~~~~~~m~~~m--~~aDlvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~G~~~~~~~ 274 (282)
T 3hbm_A 202 KFAKL-HNNIRLFIDHENIAKLM--NESNKLIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEYKY 274 (282)
T ss_dssp HHHHT-CSSEEEEESCSCHHHHH--HTEEEEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHTTCEEECGG
T ss_pred HHHhh-CCCEEEEeCHHHHHHHH--HHCCEEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHCCCEEEcch
Confidence 0 01 3589999999987 678 88999999999 8999999999999999999999999999999999999873
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.54 E-value=6.6e-15 Score=132.90 Aligned_cols=125 Identities=13% Similarity=0.082 Sum_probs=96.6
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHH-----HHHHhcCC-CeEEEEEcCCCC---CC----C--------C---------
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAF-----LKAFSKIP-QRVLWKFEDNDT---SI----F--------K--------- 337 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~-----~~~~~~~~-~~~i~~~~~~~~---~~----~--------~--------- 337 (513)
++++|||+.||.. . -.+.+..+ ++++.+.+ .++++.++.... .. . +
T Consensus 27 ~~~~VlVtgGS~~---~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 102 (224)
T 2jzc_A 27 EEKALFVTCGATV---P-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGD 102 (224)
T ss_dssp CSCCEEEECCSCC---S-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTC
T ss_pred CCCEEEEEcCCch---H-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccc
Confidence 6799999999974 2 23444444 48887777 589999887543 10 0 0
Q ss_pred -------C--CCcEEEecCCCcc-ccccCC-CceEEeccCCcccHHHHHHcCcceEeeccc----cCcHHHHHHHHHcCc
Q psy14941 338 -------P--YKNIRTSSWMPQR-DIFAHP-NMKLFISHGGLLGITEAVYEGIPVLGIPVF----GDQWANIKKLESLKA 402 (513)
Q Consensus 338 -------~--~~nv~~~~~~pq~-~lL~h~-~~~~~IthgG~~s~~Eal~~GvP~i~~P~~----~DQ~~na~~~~~~G~ 402 (513)
. .-++.+.+|+++. +++ + .++++|||||.||++|++++|+|+|++|.. .||..||+++++.|+
T Consensus 103 ~~~~~~~~~~~~~v~v~~f~~~m~~~l--~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~ 180 (224)
T 2jzc_A 103 TARQYVLMNGKLKVIGFDFSTKMQSII--RDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGY 180 (224)
T ss_dssp SCEEEESTTTSSEEEECCSSSSHHHHH--HHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSC
T ss_pred cccccccccCCceEEEeeccchHHHHH--HhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCC
Confidence 0 1256677888886 788 8 999999999999999999999999999984 369999999999999
Q ss_pred EEEeccCCCCHHHHHHHHHHh
Q psy14941 403 GKLLPYLEITEETVSDALKIV 423 (513)
Q Consensus 403 G~~l~~~~~~~~~l~~ai~~l 423 (513)
|+.+ +.++|.++|.++
T Consensus 181 ~~~~-----~~~~L~~~i~~l 196 (224)
T 2jzc_A 181 VWSC-----APTETGLIAGLR 196 (224)
T ss_dssp CCEE-----CSCTTTHHHHHH
T ss_pred EEEc-----CHHHHHHHHHHH
Confidence 9876 567777777776
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.28 E-value=1.1e-09 Score=110.87 Aligned_cols=167 Identities=18% Similarity=0.110 Sum_probs=101.1
Q ss_pred HHHHhhcCCCceEEEEeCcccccCCCCHHHHHHHHHHHhcC----C--C-eEEEEEcC----CC-CC-------C-CCCC
Q psy14941 280 MERFLNESHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKI----P--Q-RVLWKFED----ND-TS-------I-FKPY 339 (513)
Q Consensus 280 l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~----~--~-~~i~~~~~----~~-~~-------~-~~~~ 339 (513)
+.+-+.-..+..+++..|+.. +.+....+++++..+ | . ++++. +. .. .. + .+ .
T Consensus 233 ~r~~~~~~~~~~~i~~~G~~~-----~~Kg~~~li~a~~~l~~~~p~~~~~l~i~-G~~~~~g~~~~~l~~~~~~~~l-~ 305 (438)
T 3c48_A 233 SRRELGIPLHTKVVAFVGRLQ-----PFKGPQVLIKAVAALFDRDPDRNLRVIIC-GGPSGPNATPDTYRHMAEELGV-E 305 (438)
T ss_dssp HHHHTTCCSSSEEEEEESCBS-----GGGCHHHHHHHHHHHHHHCTTCSEEEEEE-CCBC------CHHHHHHHHTTC-T
T ss_pred hHHhcCCCCCCcEEEEEeeec-----ccCCHHHHHHHHHHHHhhCCCcceEEEEE-eCCCCCCcHHHHHHHHHHHcCC-C
Confidence 333333224566778888875 233444455555433 3 2 44443 43 11 11 0 13 5
Q ss_pred CcEEEecCCCcc---ccccCCCceEEeccC----CcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCC
Q psy14941 340 KNIRTSSWMPQR---DIFAHPNMKLFISHG----GLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEIT 412 (513)
Q Consensus 340 ~nv~~~~~~pq~---~lL~h~~~~~~Ithg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~ 412 (513)
+||.+.+++|+. +++ ..++++|.-. ..+++.||+++|+|+|+.+. ......+++.+.|+.++. -+
T Consensus 306 ~~v~~~g~~~~~~~~~~~--~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~~~--~d 377 (438)
T 3c48_A 306 KRIRFLDPRPPSELVAVY--RAADIVAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEGETGLLVDG--HS 377 (438)
T ss_dssp TTEEEECCCCHHHHHHHH--HHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBTTTEEEESS--CC
T ss_pred CcEEEcCCCChHHHHHHH--HhCCEEEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCCCcEEECCC--CC
Confidence 799999999874 566 6778888653 34689999999999999864 345555666678988873 47
Q ss_pred HHHHHHHHHHhc-CHHHHHHHHHHHHHHhcCCCC---hHHHHHHHHHHHHHhCC
Q psy14941 413 EETVSDALKIVL-SPEYKENAEDLGTRFRDRPQS---PLEVAIYWIEYVIKYNG 462 (513)
Q Consensus 413 ~~~l~~ai~~ll-~~~y~~~a~~~~~~~~~~~~~---~~~~a~~~ie~~~~~~~ 462 (513)
.+++.++|.+++ |++.++++.+-+.....+ ++ -.+......+.+++...
T Consensus 378 ~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~ 430 (438)
T 3c48_A 378 PHAWADALATLLDDDETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAIANEN 430 (438)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhhcc
Confidence 899999999999 876555444333322222 22 23444445555555543
No 26
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.27 E-value=2.8e-10 Score=113.93 Aligned_cols=149 Identities=15% Similarity=0.163 Sum_probs=98.1
Q ss_pred ceEEEEeCcc-cccCCCCHHHHHHHHHHHhcC----CC-eEEEEEcCCC------CCCCCCCCcEEEecCCCcc---ccc
Q psy14941 290 GVIYFSMGSM-LKTSSFPPDKFKAFLKAFSKI----PQ-RVLWKFEDND------TSIFKPYKNIRTSSWMPQR---DIF 354 (513)
Q Consensus 290 ~~v~vs~Gs~-~~~~~~~~~~~~~~~~~~~~~----~~-~~i~~~~~~~------~~~~~~~~nv~~~~~~pq~---~lL 354 (513)
..+++..|+. . +.+....+++++.++ +. ++++.-++.. ..+ . .+||.+.+++|+. +++
T Consensus 208 ~~~i~~~G~~~~-----~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~~~l~~~~~~-~-~~~v~~~g~~~~~~~~~~~ 280 (406)
T 2gek_A 208 GRTVLFLGRYDE-----PRKGMAVLLAALPKLVARFPDVEILIVGRGDEDELREQAGD-L-AGHLRFLGQVDDATKASAM 280 (406)
T ss_dssp SCEEEEESCTTS-----GGGCHHHHHHHHHHHHTTSTTCEEEEESCSCHHHHHHHTGG-G-GGGEEECCSCCHHHHHHHH
T ss_pred CeEEEEEeeeCc-----cccCHHHHHHHHHHHHHHCCCeEEEEEcCCcHHHHHHHHHh-c-cCcEEEEecCCHHHHHHHH
Confidence 3577778887 4 334445555555543 33 5555433322 112 3 5789999999975 677
Q ss_pred cCCCceEEeccC----C-cccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc-CHHH
Q psy14941 355 AHPNMKLFISHG----G-LLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-SPEY 428 (513)
Q Consensus 355 ~h~~~~~~Ithg----G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-~~~y 428 (513)
.+++++|.-. | .+++.||+++|+|+|+.+. ......+.+.+.|..++. -+.+++.++|.+++ |++.
T Consensus 281 --~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~~~g~~~~~--~d~~~l~~~i~~l~~~~~~ 352 (406)
T 2gek_A 281 --RSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADGDAGRLVPV--DDADGMAAALIGILEDDQL 352 (406)
T ss_dssp --HHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTTTSSEECCT--TCHHHHHHHHHHHHHCHHH
T ss_pred --HHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCCCceEEeCC--CCHHHHHHHHHHHHcCHHH
Confidence 6778888543 3 3589999999999999854 556667777778888863 37899999999999 9876
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHHHH
Q psy14941 429 KENAEDLGTRFRDRPQSPLEVAIYWI 454 (513)
Q Consensus 429 ~~~a~~~~~~~~~~~~~~~~~a~~~i 454 (513)
++++.+-+..... ..+....+..+.
T Consensus 353 ~~~~~~~~~~~~~-~~s~~~~~~~~~ 377 (406)
T 2gek_A 353 RAGYVARASERVH-RYDWSVVSAQIM 377 (406)
T ss_dssp HHHHHHHHHHHGG-GGBHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hCCHHHHHHHHH
Confidence 6666555544443 334444333333
No 27
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.26 E-value=3.3e-10 Score=112.93 Aligned_cols=331 Identities=11% Similarity=0.069 Sum_probs=178.0
Q ss_pred cCceEeEEcCCC---CCChHHHHHHHHHHHHhCCCcEEEEEeecCCc--c---ccCCeEEEEecCcccchhhHHHHHhhc
Q psy14941 25 QCSKILAIFPTP---AKSHQIIFDTILVELYQRGHDLTVITQYPETL--V---HYERMKVLDIKGTHTYNSTIEDIYELS 96 (513)
Q Consensus 25 ~~~kIL~~~p~~---~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~~--~---~~~~~~~i~~~~~~~~~~~~~~~~~~~ 96 (513)
...|||++.+.. ..|.-..+..++++| +||+|++++...... . ...++..+.++......
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 70 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLP---------- 70 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCS----------
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEcccccccc----------
Confidence 346899777532 368889999999999 799999999865432 1 13455565554221110
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhCCHhHHHHhccCCCccEEEEccchhch-HHhhhhccCCCEEEEeCCCCchhhhhhcCC
Q psy14941 97 ADSIKRIHINFIDQEIQVENIFLHENMKSIWNMENKYDLIITEMFLTDA-FLVIPYLYKVPYISIASSTLHPQHSERLGL 175 (513)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~Dlvi~d~~~~~~-~~~~a~~l~iP~i~~~~~~~~~~~~~~~g~ 175 (513)
... . . ..+.+.++ +.+||+|++....... ...+++.+++|.+.+.........
T Consensus 71 --~~~---~-~-------------~~l~~~~~-~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------ 124 (394)
T 3okp_A 71 --TPT---T-A-------------HAMAEIIR-EREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW------ 124 (394)
T ss_dssp --CHH---H-H-------------HHHHHHHH-HTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH------
T ss_pred --chh---h-H-------------HHHHHHHH-hcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh------
Confidence 000 0 0 13445565 5689999986543322 223567789984443322211000
Q ss_pred CCCCCccCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHhCCCCCCHHhhhcCccEEEEeccCccCCC
Q psy14941 176 PDNPSYIPSYVSAYTDHMSFTERLSNTFVGLYYKWYYDYKSHGAANRIIHKYFPEIPRIQDLLNTCSLTLVNTHHTINIA 255 (513)
Q Consensus 176 p~~~s~~P~~~~~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~s~~~l~~~ 255 (513)
. ...+..+ ..+ .+.+.+|.+++.|....+.-
T Consensus 125 -----------~----~~~~~~~------------------------~~~----------~~~~~~d~ii~~s~~~~~~~ 155 (394)
T 3okp_A 125 -----------S----MLPGSRQ------------------------SLR----------KIGTEVDVLTYISQYTLRRF 155 (394)
T ss_dssp -----------T----TSHHHHH------------------------HHH----------HHHHHCSEEEESCHHHHHHH
T ss_pred -----------h----hcchhhH------------------------HHH----------HHHHhCCEEEEcCHHHHHHH
Confidence 0 0000000 000 01123455555554432221
Q ss_pred cc---CCCceEEeCc-ccccCCCC-Cc---HHHHHHhhcCCCceEEEEeCcccccCCCCHHHHHHHHHHHhcC----CC-
Q psy14941 256 RP---LPANVVEIGG-IHVKPAKK-LN---EEMERFLNESHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKI----PQ- 322 (513)
Q Consensus 256 ~p---~~p~~~~vG~-l~~~~~~~-l~---~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~----~~- 322 (513)
.. ...++..+.. +....-.+ .+ +++.+-+.-.++..+++..|+.. +.+-...+++++..+ +.
T Consensus 156 ~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~-----~~Kg~~~li~a~~~l~~~~~~~ 230 (394)
T 3okp_A 156 KSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLV-----PRKGQDSLIKAMPQVIAARPDA 230 (394)
T ss_dssp HHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTCCEEEEESCSC-----GGGCHHHHHHHHHHHHHHSTTC
T ss_pred HHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCCcCceEEEEEeccc-----cccCHHHHHHHHHHHHhhCCCe
Confidence 10 1123333332 11111111 11 22333333224557788888875 334455555555443 33
Q ss_pred eEEEEEcCCC-------CCCCCCCCcEEEecCCCcc---ccccCCCceEEec-----------cCCcccHHHHHHcCcce
Q psy14941 323 RVLWKFEDND-------TSIFKPYKNIRTSSWMPQR---DIFAHPNMKLFIS-----------HGGLLGITEAVYEGIPV 381 (513)
Q Consensus 323 ~~i~~~~~~~-------~~~~~~~~nv~~~~~~pq~---~lL~h~~~~~~It-----------hgG~~s~~Eal~~GvP~ 381 (513)
++++.-.+.. ..+ + .+||.+.+++|+. +++ ..++++|. -|..+++.||+++|+|+
T Consensus 231 ~l~i~G~g~~~~~l~~~~~~-~-~~~v~~~g~~~~~~~~~~~--~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~Pv 306 (394)
T 3okp_A 231 QLLIVGSGRYESTLRRLATD-V-SQNVKFLGRLEYQDMINTL--AAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPV 306 (394)
T ss_dssp EEEEECCCTTHHHHHHHTGG-G-GGGEEEEESCCHHHHHHHH--HHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCE
T ss_pred EEEEEcCchHHHHHHHHHhc-c-cCeEEEcCCCCHHHHHHHH--HhCCEEEecCccccccccccccCcHHHHHHHcCCCE
Confidence 6655533321 122 3 5899999999866 456 67888887 56667899999999999
Q ss_pred EeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc-CHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q psy14941 382 LGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-SPEYKENAEDLGTRFRDRPQSPLEVAIYWIEYVIK 459 (513)
Q Consensus 382 i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~~~~ 459 (513)
|+.+..+ ....+. .|.|..++. -+.+++.++|.+++ |++.++++.+-+.....+.++....+.. ++.+++
T Consensus 307 I~~~~~~----~~e~i~-~~~g~~~~~--~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~ 377 (394)
T 3okp_A 307 IAGTSGG----APETVT-PATGLVVEG--SDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGER-LTNILQ 377 (394)
T ss_dssp EECSSTT----GGGGCC-TTTEEECCT--TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTBHHHHHHH-HHHHHH
T ss_pred EEeCCCC----hHHHHh-cCCceEeCC--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHH
Confidence 9987543 222222 348888874 37899999999999 8776665554444332222243344333 344443
No 28
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.26 E-value=5e-10 Score=110.80 Aligned_cols=164 Identities=15% Similarity=0.199 Sum_probs=106.0
Q ss_pred HHHHHhhcCCCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCe-----EEEEEcCCCCCC--------CCCCCcEEEe
Q psy14941 279 EMERFLNESHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQR-----VLWKFEDNDTSI--------FKPYKNIRTS 345 (513)
Q Consensus 279 ~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~--------~~~~~nv~~~ 345 (513)
++.+-+.-.+++.+++..|+.. +.+....+++++..+..+ -++.++...... .+ .+||.+.
T Consensus 185 ~~~~~~~~~~~~~~i~~~G~~~-----~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~-~~~v~~~ 258 (374)
T 2iw1_A 185 IYRQKNGIKEQQNLLLQVGSDF-----GRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGV-RSNVHFF 258 (374)
T ss_dssp HHHHHTTCCTTCEEEEEECSCT-----TTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTC-GGGEEEE
T ss_pred HHHHHhCCCCCCeEEEEeccch-----hhcCHHHHHHHHHHhHhccCCceEEEEEcCCCHHHHHHHHHHcCC-CCcEEEC
Confidence 3444443334567788888875 445667778888876421 233444432110 13 5799999
Q ss_pred cCCCc-cccccCCCceEEec----cCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHH
Q psy14941 346 SWMPQ-RDIFAHPNMKLFIS----HGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDAL 420 (513)
Q Consensus 346 ~~~pq-~~lL~h~~~~~~It----hgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai 420 (513)
++..+ .+++ ..++++|. -|..+++.||+++|+|+|+.+.. .+...+++.+.|..++. .-+.+++.++|
T Consensus 259 g~~~~~~~~~--~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~~~g~~~~~-~~~~~~l~~~i 331 (374)
T 2iw1_A 259 SGRNDVSELM--AAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIADANCGTVIAE-PFSQEQLNEVL 331 (374)
T ss_dssp SCCSCHHHHH--HHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHHHTCEEEECS-SCCHHHHHHHH
T ss_pred CCcccHHHHH--HhcCEEEeccccCCcccHHHHHHHCCCCEEEecCC----CchhhhccCCceEEeCC-CCCHHHHHHHH
Confidence 98654 3667 67788886 45668899999999999998653 35567777889998861 34789999999
Q ss_pred HHhc-CHHHHHHHHHHHHHHhcC--CCChHHHHHHHHH
Q psy14941 421 KIVL-SPEYKENAEDLGTRFRDR--PQSPLEVAIYWIE 455 (513)
Q Consensus 421 ~~ll-~~~y~~~a~~~~~~~~~~--~~~~~~~a~~~ie 455 (513)
.+++ |++.++++.+-+.....+ ...-.+...+.+|
T Consensus 332 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 369 (374)
T 2iw1_A 332 RKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIIT 369 (374)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred HHHHcChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999 976655544444333221 1244555555444
No 29
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.23 E-value=4.3e-09 Score=105.83 Aligned_cols=135 Identities=15% Similarity=0.133 Sum_probs=89.8
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhc----CC-CeEEEEEcCCC--------CC----C-CCCCCcEEEecCCC
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSK----IP-QRVLWKFEDND--------TS----I-FKPYKNIRTSSWMP 349 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~----~~-~~~i~~~~~~~--------~~----~-~~~~~nv~~~~~~p 349 (513)
++..+++..|.... .+-...+++++.. .+ .++++.-++.. +. . .. .++|.+.+|++
T Consensus 229 ~~~~~i~~vGrl~~-----~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~-~~~V~~~G~~~ 302 (416)
T 2x6q_A 229 PEKPIITQVSRFDP-----WKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGE-DYDVKVLTNLI 302 (416)
T ss_dssp TTSCEEEEECCCCT-----TSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTT-CTTEEEEEGGG
T ss_pred CCCcEEEEEecccc-----ccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCC-CCcEEEecccC
Confidence 35567777788752 2233444444443 33 36666544421 00 0 13 57999999776
Q ss_pred ---cc---ccccCCCceEEeccC----CcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHH
Q psy14941 350 ---QR---DIFAHPNMKLFISHG----GLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDA 419 (513)
Q Consensus 350 ---q~---~lL~h~~~~~~Ithg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~a 419 (513)
+. +++ ..++++|.-. ..+++.||+++|+|+|+.+. ..+...+++.+.|..++ +.+++.++
T Consensus 303 ~~~~~~~~~~~--~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~~~g~l~~----d~~~la~~ 372 (416)
T 2x6q_A 303 GVHAREVNAFQ--RASDVILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDGETGFLVR----DANEAVEV 372 (416)
T ss_dssp TCCHHHHHHHH--HHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBTTTEEEES----SHHHHHHH
T ss_pred CCCHHHHHHHH--HhCCEEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecCCCeEEEC----CHHHHHHH
Confidence 22 566 6778888654 45789999999999999864 45666666677898886 78999999
Q ss_pred HHHhc-CHHHHHHHHHHHHH
Q psy14941 420 LKIVL-SPEYKENAEDLGTR 438 (513)
Q Consensus 420 i~~ll-~~~y~~~a~~~~~~ 438 (513)
|.+++ |++.++++.+-+..
T Consensus 373 i~~ll~~~~~~~~~~~~a~~ 392 (416)
T 2x6q_A 373 VLYLLKHPEVSKEMGAKAKE 392 (416)
T ss_dssp HHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHH
Confidence 99999 98766655544433
No 30
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.21 E-value=1.8e-10 Score=114.27 Aligned_cols=155 Identities=13% Similarity=0.095 Sum_probs=106.0
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcC----C-CeEEEEEcCCC-C----C---CCCCCCcEEEecCCCc---c
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKI----P-QRVLWKFEDND-T----S---IFKPYKNIRTSSWMPQ---R 351 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~----~-~~~i~~~~~~~-~----~---~~~~~~nv~~~~~~pq---~ 351 (513)
++++|+++.|.... .+....+++++.++ + ..+++..+++. . . + . .++|++.+++++ .
T Consensus 197 ~~~~vl~~~gr~~~-----~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~-~-~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 197 EGPYVTVTMHRREN-----WPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLK-G-VRNFVLLDPLEYGSMA 269 (376)
T ss_dssp SSCEEEECCCCGGG-----GGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHT-T-CTTEEEECCCCHHHHH
T ss_pred CCCEEEEEeCcccc-----hHHHHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhc-c-CCCEEEECCCCHHHHH
Confidence 35677777775531 11345566665543 3 36665545321 1 0 1 2 468999976665 4
Q ss_pred ccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc-CHHHHH
Q psy14941 352 DIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-SPEYKE 430 (513)
Q Consensus 352 ~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-~~~y~~ 430 (513)
+++ ..+++||+.+| |.+.||+++|+|+|+.|..+++... .+.|.|+.++ .+.++|.++|.+++ |++.++
T Consensus 270 ~~~--~~ad~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~g~g~lv~---~d~~~la~~i~~ll~d~~~~~ 339 (376)
T 1v4v_A 270 ALM--RASLLLVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKAGILKLAG---TDPEGVYRVVKGLLENPEELS 339 (376)
T ss_dssp HHH--HTEEEEEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHHTSEEECC---SCHHHHHHHHHHHHTCHHHHH
T ss_pred HHH--HhCcEEEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcCCceEECC---CCHHHHHHHHHHHHhChHhhh
Confidence 778 78999999884 4466999999999999877776663 4678898885 28999999999999 987777
Q ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHHhC
Q psy14941 431 NAEDLGTRFRDRPQSPLEVAIYWIEYVIKYN 461 (513)
Q Consensus 431 ~a~~~~~~~~~~~~~~~~~a~~~ie~~~~~~ 461 (513)
++.+.++.+... .+.++.++.++.++..+
T Consensus 340 ~~~~~~~~~~~~--~~~~~i~~~i~~~~~~~ 368 (376)
T 1v4v_A 340 RMRKAKNPYGDG--KAGLMVARGVAWRLGLG 368 (376)
T ss_dssp HHHHSCCSSCCS--CHHHHHHHHHHHHTTSS
T ss_pred hhcccCCCCCCC--hHHHHHHHHHHHHhccc
Confidence 766644444332 67888888888876543
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.21 E-value=1.6e-10 Score=115.02 Aligned_cols=158 Identities=12% Similarity=0.067 Sum_probs=106.6
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhc----CCC-eEEEEEcCCC-C----C---CCCCCCcEEEecCCCc---c
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSK----IPQ-RVLWKFEDND-T----S---IFKPYKNIRTSSWMPQ---R 351 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~----~~~-~~i~~~~~~~-~----~---~~~~~~nv~~~~~~pq---~ 351 (513)
++++++++.|...+ . .+....+++++.+ .+. ++++..+++. . . + . .+||.+.+++++ .
T Consensus 204 ~~~~vl~~~gr~~~---~-~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~-~-~~~v~~~g~~~~~~~~ 277 (384)
T 1vgv_A 204 DKKMILVTGHRRES---F-GRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILG-H-VKNVILIDPQEYLPFV 277 (384)
T ss_dssp TSEEEEEECCCBSS---C-CHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHT-T-CTTEEEECCCCHHHHH
T ss_pred CCCEEEEEeCCccc---c-chHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhh-c-CCCEEEeCCCCHHHHH
Confidence 35678888887641 1 1345556666654 343 6666444321 1 1 1 2 468999877765 3
Q ss_pred ccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc-CHHHHH
Q psy14941 352 DIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-SPEYKE 430 (513)
Q Consensus 352 ~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-~~~y~~ 430 (513)
+++ ..+++||+.+| +.+.||+++|+|+|+.|..++... +.+.|.|+.++. +.++|.++|.+++ |++.++
T Consensus 278 ~~~--~~ad~~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~g~g~lv~~---d~~~la~~i~~ll~d~~~~~ 347 (384)
T 1vgv_A 278 WLM--NHAWLILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTAGTVRLVGT---DKQRIVEEVTRLLKDENEYQ 347 (384)
T ss_dssp HHH--HHCSEEEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHHTSEEEECS---SHHHHHHHHHHHHHCHHHHH
T ss_pred HHH--HhCcEEEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhCCceEEeCC---CHHHHHHHHHHHHhChHHHh
Confidence 667 78899999986 458899999999999987554433 355689999874 8999999999999 988777
Q ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHHhCCC
Q psy14941 431 NAEDLGTRFRDRPQSPLEVAIYWIEYVIKYNGA 463 (513)
Q Consensus 431 ~a~~~~~~~~~~~~~~~~~a~~~ie~~~~~~~~ 463 (513)
++.+-+..+... ...++.++.++.+.+.-+.
T Consensus 348 ~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~ 378 (384)
T 1vgv_A 348 AMSRAHNPYGDG--QACSRILEALKNNRISLGS 378 (384)
T ss_dssp HHHSSCCTTCCS--CHHHHHHHHHHHTCCCC--
T ss_pred hhhhccCCCcCC--CHHHHHHHHHHHHHHhhcc
Confidence 666555444332 5677777777776655443
No 32
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.19 E-value=4.2e-09 Score=106.43 Aligned_cols=151 Identities=13% Similarity=0.062 Sum_probs=92.8
Q ss_pred eEEEEeCcccccCCCCHHHHHHHHHHHhcC------CC-eEEEEEcCCCC----------CCCCCCCcEEEecCCCcc--
Q psy14941 291 VIYFSMGSMLKTSSFPPDKFKAFLKAFSKI------PQ-RVLWKFEDNDT----------SIFKPYKNIRTSSWMPQR-- 351 (513)
Q Consensus 291 ~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~------~~-~~i~~~~~~~~----------~~~~~~~nv~~~~~~pq~-- 351 (513)
.+++..|+... +.+-...+++++..+ +. ++++. |.... .+ . ++++.+.+|+|+.
T Consensus 252 ~~i~~~G~~~~----~~Kg~~~li~a~~~l~~~~~~~~~~l~i~-G~g~~~~~~~l~~~~~~-~-~~~~~~~g~~~~~~~ 324 (439)
T 3fro_A 252 VTFMFIGRFDR----GQKGVDVLLKAIEILSSKKEFQEMRFIII-GKGDPELEGWARSLEEK-H-GNVKVITEMLSREFV 324 (439)
T ss_dssp EEEEEECCSSC----TTBCHHHHHHHHHHHHTSGGGGGEEEEEE-CCCCHHHHHHHHHHHHH-C-TTEEEECSCCCHHHH
T ss_pred cEEEEEccccc----ccccHHHHHHHHHHHHhcccCCCeEEEEE-cCCChhHHHHHHHHHhh-c-CCEEEEcCCCCHHHH
Confidence 78888888751 223344455555443 33 55444 43221 11 3 4567788899986
Q ss_pred -ccccCCCceEEecc----CCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc--
Q psy14941 352 -DIFAHPNMKLFISH----GGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-- 424 (513)
Q Consensus 352 -~lL~h~~~~~~Ith----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-- 424 (513)
+++ ..++++|.- |-.+++.||+++|+|+|+... ......++ .|.|..++. -+.+++.++|.+++
T Consensus 325 ~~~~--~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~-~~~g~~~~~--~d~~~la~~i~~ll~~ 395 (439)
T 3fro_A 325 RELY--GSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIIT-NETGILVKA--GDPGELANAILKALEL 395 (439)
T ss_dssp HHHH--TTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCC-TTTCEEECT--TCHHHHHHHHHHHHHH
T ss_pred HHHH--HHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEE-cCceEEeCC--CCHHHHHHHHHHHHhc
Confidence 456 678888843 334789999999999999854 33444443 468988873 47899999999998
Q ss_pred CHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q psy14941 425 SPEYKENAEDLGTRFRDRPQSPLEVAIYWIEYVIK 459 (513)
Q Consensus 425 ~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie~~~~ 459 (513)
|++.++++.+-+....++ .+....+..+ +.+.+
T Consensus 396 ~~~~~~~~~~~~~~~~~~-~s~~~~~~~~-~~~~~ 428 (439)
T 3fro_A 396 SRSDLSKFRENCKKRAMS-FSWEKSAERY-VKAYT 428 (439)
T ss_dssp TTTTTHHHHHHHHHHHHT-SCHHHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHHHhh-CcHHHHHHHH-HHHHH
Confidence 555555554444443333 4544444443 43443
No 33
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.18 E-value=6.6e-09 Score=107.16 Aligned_cols=134 Identities=13% Similarity=0.101 Sum_probs=93.5
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCC----e-EEEEEcC--CC--------------C---------CCCC
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQ----R-VLWKFED--ND--------------T---------SIFK 337 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~----~-~i~~~~~--~~--------------~---------~~~~ 337 (513)
.+..+++..|... +.+-...+++++..+.. . .++.+++ +. . .+ +
T Consensus 260 ~~~~~i~~vGrl~-----~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~-l 333 (499)
T 2r60_A 260 MELPAIIASSRLD-----QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNND-C 333 (499)
T ss_dssp TTSCEEEECSCCC-----GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTT-C
T ss_pred CCCcEEEEeecCc-----cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcC-C
Confidence 3456777888875 45667788888887642 2 3455554 11 0 02 4
Q ss_pred CCCcEEEecCCCcc---ccccCCCc----eEEecc----CCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEe
Q psy14941 338 PYKNIRTSSWMPQR---DIFAHPNM----KLFISH----GGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLL 406 (513)
Q Consensus 338 ~~~nv~~~~~~pq~---~lL~h~~~----~~~Ith----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l 406 (513)
.++|.+.+++|+. +++ ..+ +++|.- |-.+++.||+++|+|+|+... ......+.+.+.|..+
T Consensus 334 -~~~V~~~G~v~~~~~~~~~--~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~~~g~l~ 406 (499)
T 2r60_A 334 -RGKVSMFPLNSQQELAGCY--AYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGGKYGVLV 406 (499)
T ss_dssp -BTTEEEEECCSHHHHHHHH--HHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGGTSSEEE
T ss_pred -CceEEECCCCCHHHHHHHH--HhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCCceEEEe
Confidence 6789999999865 556 677 888843 334789999999999999853 3455666666688888
Q ss_pred ccCCCCHHHHHHHHHHhc-CHHHHHHHHHHH
Q psy14941 407 PYLEITEETVSDALKIVL-SPEYKENAEDLG 436 (513)
Q Consensus 407 ~~~~~~~~~l~~ai~~ll-~~~y~~~a~~~~ 436 (513)
+. -+.+++.++|.+++ |++.++++.+-+
T Consensus 407 ~~--~d~~~la~~i~~ll~~~~~~~~~~~~a 435 (499)
T 2r60_A 407 DP--EDPEDIARGLLKAFESEETWSAYQEKG 435 (499)
T ss_dssp CT--TCHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred CC--CCHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 74 47899999999999 887555544433
No 34
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.13 E-value=1.7e-09 Score=107.86 Aligned_cols=146 Identities=16% Similarity=0.163 Sum_probs=91.6
Q ss_pred HHHHHHhhcCCCceEEEEeCcccccCCCCHHHHHHHHHHHhcC----CCeEEEEEcCCCC---------CCCCCCCcEEE
Q psy14941 278 EEMERFLNESHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKI----PQRVLWKFEDNDT---------SIFKPYKNIRT 344 (513)
Q Consensus 278 ~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~---------~~~~~~~nv~~ 344 (513)
+++.+-+.-.+++.+++..|+.. +.+....+++++..+ +.++++.-.+... .+ + .+||.+
T Consensus 199 ~~~~~~~~~~~~~~~i~~~G~~~-----~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~l~~~~~~~~-l-~~~v~~ 271 (394)
T 2jjm_A 199 TQLKKEYGISESEKILIHISNFR-----KVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEFCTILQLVKNLH-I-EDRVLF 271 (394)
T ss_dssp HHHHHHTTCC---CEEEEECCCC-----GGGTHHHHHHHHHHHHHSSCCEEEEECCCTTHHHHHHHHHTTT-C-GGGBCC
T ss_pred HHHHHHcCCCCCCeEEEEeeccc-----cccCHHHHHHHHHHHHhhCCCEEEEECCchHHHHHHHHHHHcC-C-CCeEEE
Confidence 33444443223456677778875 334455556665543 3455444322210 12 3 578998
Q ss_pred ecCCCcc-ccccCCCceEEe----ccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHH
Q psy14941 345 SSWMPQR-DIFAHPNMKLFI----SHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDA 419 (513)
Q Consensus 345 ~~~~pq~-~lL~h~~~~~~I----thgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~a 419 (513)
.++..+. +++ .+++++| .-|..+++.||+++|+|+|+.+..+ ....+++.+.|..++. -+.+++.++
T Consensus 272 ~g~~~~~~~~~--~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~~~g~~~~~--~d~~~la~~ 343 (394)
T 2jjm_A 272 LGKQDNVAELL--AMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHGDTGYLCEV--GDTTGVADQ 343 (394)
T ss_dssp CBSCSCTHHHH--HTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBTTTEEEECT--TCHHHHHHH
T ss_pred eCchhhHHHHH--HhCCEEEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcCCceEEeCC--CCHHHHHHH
Confidence 8875543 677 7788888 5566689999999999999987532 2233444568888874 378999999
Q ss_pred HHHhc-CHHHHHHHHHHHHH
Q psy14941 420 LKIVL-SPEYKENAEDLGTR 438 (513)
Q Consensus 420 i~~ll-~~~y~~~a~~~~~~ 438 (513)
|.+++ |++.++++.+-+..
T Consensus 344 i~~l~~~~~~~~~~~~~~~~ 363 (394)
T 2jjm_A 344 AIQLLKDEELHRNMGERARE 363 (394)
T ss_dssp HHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHcCHHHHHHHHHHHHH
Confidence 99999 98766555544443
No 35
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.11 E-value=4.5e-10 Score=109.87 Aligned_cols=127 Identities=12% Similarity=0.055 Sum_probs=87.7
Q ss_pred EEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCCCC---C---CCCCCcEEEecCCCcc---ccccCCCceEE
Q psy14941 292 IYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDNDTS---I---FKPYKNIRTSSWMPQR---DIFAHPNMKLF 362 (513)
Q Consensus 292 v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~---~~~~~nv~~~~~~pq~---~lL~h~~~~~~ 362 (513)
+++..|+.. +.+-...+++++..++.++++.-++.... + .. .+||.+.+|+|+. +++ .+++++
T Consensus 164 ~i~~vG~~~-----~~Kg~~~li~a~~~~~~~l~i~G~g~~~~~l~~~~~~~-~~~v~~~g~~~~~~l~~~~--~~adv~ 235 (342)
T 2iuy_A 164 FLLFMGRVS-----PHKGALEAAAFAHACGRRLVLAGPAWEPEYFDEITRRY-GSTVEPIGEVGGERRLDLL--ASAHAV 235 (342)
T ss_dssp CEEEESCCC-----GGGTHHHHHHHHHHHTCCEEEESCCCCHHHHHHHHHHH-TTTEEECCCCCHHHHHHHH--HHCSEE
T ss_pred EEEEEeccc-----cccCHHHHHHHHHhcCcEEEEEeCcccHHHHHHHHHHh-CCCEEEeccCCHHHHHHHH--HhCCEE
Confidence 455567764 45667778888877766766553322110 0 02 4799999999976 667 667888
Q ss_pred ecc--------------CCcccHHHHHHcCcceEeeccccCcHHHHHHHHH--cCcEEEeccCCCCHHHHHHHHHHhcCH
Q psy14941 363 ISH--------------GGLLGITEAVYEGIPVLGIPVFGDQWANIKKLES--LKAGKLLPYLEITEETVSDALKIVLSP 426 (513)
Q Consensus 363 Ith--------------gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~--~G~G~~l~~~~~~~~~l~~ai~~ll~~ 426 (513)
|.- |-.+++.||+++|+|+|+.+.. .+...+++ .+.|..++ . +.+++.++|.++++
T Consensus 236 v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~~~g~~~~--~-d~~~l~~~i~~l~~- 307 (342)
T 2iuy_A 236 LAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGEVVGYGTD--F-APDEARRTLAGLPA- 307 (342)
T ss_dssp EECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEEECCSSSC--C-CHHHHHHHHHTSCC-
T ss_pred EECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCCCceEEcC--C-CHHHHHHHHHHHHH-
Confidence 732 3346799999999999998653 36666666 56777776 4 89999999999887
Q ss_pred HHHHHHHHHH
Q psy14941 427 EYKENAEDLG 436 (513)
Q Consensus 427 ~y~~~a~~~~ 436 (513)
.+++++..
T Consensus 308 --~~~~~~~~ 315 (342)
T 2iuy_A 308 --SDEVRRAA 315 (342)
T ss_dssp --HHHHHHHH
T ss_pred --HHHHHHHH
Confidence 45555544
No 36
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.01 E-value=1.2e-09 Score=109.23 Aligned_cols=155 Identities=13% Similarity=0.079 Sum_probs=107.9
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhc----CCC-eEEEEEcCCC-C-------CCCCCCCcEEEecCCCcc---
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSK----IPQ-RVLWKFEDND-T-------SIFKPYKNIRTSSWMPQR--- 351 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~----~~~-~~i~~~~~~~-~-------~~~~~~~nv~~~~~~pq~--- 351 (513)
++++++++.|...+. . +.+..+++++.+ .+. ++++..+++. . .+ . .+|+++.+++++.
T Consensus 223 ~~~~vlv~~~r~~~~---~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~-~-~~~v~l~~~l~~~~~~ 296 (403)
T 3ot5_A 223 DNRLILMTAHRRENL---G-EPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILG-G-HERIHLIEPLDAIDFH 296 (403)
T ss_dssp TCEEEEECCCCHHHH---T-THHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHT-T-CTTEEEECCCCHHHHH
T ss_pred CCCEEEEEeCccccc---C-cHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhC-C-CCCEEEeCCCCHHHHH
Confidence 456777776542211 1 124555555543 344 6777654321 1 12 3 5799999998743
Q ss_pred ccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc-CHHHHH
Q psy14941 352 DIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-SPEYKE 430 (513)
Q Consensus 352 ~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-~~~y~~ 430 (513)
.++ ..++++|+..|. ...||+++|+|+|++|-.++++. ..+.|.|+.+.. +.++|.+++.+++ |+..++
T Consensus 297 ~l~--~~ad~vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v~~g~~~lv~~---d~~~l~~ai~~ll~~~~~~~ 366 (403)
T 3ot5_A 297 NFL--RKSYLVFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GIEAGTLKLIGT---NKENLIKEALDLLDNKESHD 366 (403)
T ss_dssp HHH--HHEEEEEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HHHHTSEEECCS---CHHHHHHHHHHHHHCHHHHH
T ss_pred HHH--HhcCEEEECCcc-HHHHHHHhCCCEEEecCCCcchh----heeCCcEEEcCC---CHHHHHHHHHHHHcCHHHHH
Confidence 566 788999998753 33799999999999977777654 347788888762 7999999999999 998888
Q ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHHh
Q psy14941 431 NAEDLGTRFRDRPQSPLEVAIYWIEYVIKY 460 (513)
Q Consensus 431 ~a~~~~~~~~~~~~~~~~~a~~~ie~~~~~ 460 (513)
++.+.+..+.+. ++.++.++.++..+..
T Consensus 367 ~m~~~~~~~g~~--~aa~rI~~~l~~~l~~ 394 (403)
T 3ot5_A 367 KMAQAANPYGDG--FAANRILAAIKSHFEE 394 (403)
T ss_dssp HHHHSCCTTCCS--CHHHHHHHHHHHHHTC
T ss_pred HHHhhcCcccCC--cHHHHHHHHHHHHhCC
Confidence 887666556544 7888888888887654
No 37
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.95 E-value=3.2e-09 Score=105.93 Aligned_cols=150 Identities=17% Similarity=0.158 Sum_probs=102.0
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcC----CC-eEEEEEcCCC-----C---CCCCCCCcEEEecCCCc---c
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKI----PQ-RVLWKFEDND-----T---SIFKPYKNIRTSSWMPQ---R 351 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~----~~-~~i~~~~~~~-----~---~~~~~~~nv~~~~~~pq---~ 351 (513)
++++++++.|-.. .... .+..+++++.++ +. ++++..+.+. + .+ . .+|+++.+++++ .
T Consensus 229 ~~~~vlv~~hR~~---~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~-~-~~~v~~~~~lg~~~~~ 302 (396)
T 3dzc_A 229 SKKLILVTGHRRE---SFGG-GFERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLK-G-VSNIVLIEPQQYLPFV 302 (396)
T ss_dssp TSEEEEEECSCBC---CCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTT-T-CTTEEEECCCCHHHHH
T ss_pred CCCEEEEEECCcc---cchh-HHHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHc-C-CCCEEEeCCCCHHHHH
Confidence 4567777653222 1112 256677776654 43 6777654321 1 12 3 578999888864 3
Q ss_pred ccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc-CHHHHH
Q psy14941 352 DIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-SPEYKE 430 (513)
Q Consensus 352 ~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-~~~y~~ 430 (513)
.++ ..++++|+-.| |.+.||+++|+|+|+++-.++++. +.+.|.++.+.. +.++|.+++.+++ |++.++
T Consensus 303 ~l~--~~ad~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~~G~~~lv~~---d~~~l~~ai~~ll~d~~~~~ 372 (396)
T 3dzc_A 303 YLM--DRAHIILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVAAGTVKLVGT---NQQQICDALSLLLTDPQAYQ 372 (396)
T ss_dssp HHH--HHCSEEEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHHHTSEEECTT---CHHHHHHHHHHHHHCHHHHH
T ss_pred HHH--HhcCEEEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHHcCceEEcCC---CHHHHHHHHHHHHcCHHHHH
Confidence 566 78899999987 556799999999999866666542 456788877652 6899999999999 998888
Q ss_pred HHHHHHHHHhcCCCChHHHHHHHHH
Q psy14941 431 NAEDLGTRFRDRPQSPLEVAIYWIE 455 (513)
Q Consensus 431 ~a~~~~~~~~~~~~~~~~~a~~~ie 455 (513)
++.+.+..+.+. ++.++.++.|+
T Consensus 373 ~m~~~~~~~~~~--~aa~ri~~~l~ 395 (396)
T 3dzc_A 373 AMSQAHNPYGDG--KACQRIADILA 395 (396)
T ss_dssp HHHTSCCTTCCS--CHHHHHHHHHH
T ss_pred HHhhccCCCcCC--hHHHHHHHHHh
Confidence 877766555444 67777766654
No 38
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.94 E-value=5e-08 Score=97.85 Aligned_cols=151 Identities=11% Similarity=0.154 Sum_probs=96.0
Q ss_pred CceEEEEeCcccccCCCCHHHHHHHHHHHhcC----CC-eEEEEEcCCCC---------------CCCCCCCc-------
Q psy14941 289 NGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKI----PQ-RVLWKFEDNDT---------------SIFKPYKN------- 341 (513)
Q Consensus 289 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~----~~-~~i~~~~~~~~---------------~~~~~~~n------- 341 (513)
+..+++..|... +.+-...+++++.++ +. ++++.-++... .+ + .++
T Consensus 183 ~~~~il~vGr~~-----~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~-l-~~~v~~l~~v 255 (413)
T 3oy2_A 183 DDVLFLNMNRNT-----ARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASG-V-DNVFTHLNKI 255 (413)
T ss_dssp TSEEEECCSCSS-----GGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHT-C-SCHHHHHTTE
T ss_pred CceEEEEcCCCc-----hhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcC-c-ccccccccce
Confidence 577888888865 445556666666553 44 66665544321 11 3 444
Q ss_pred EEEecCCCcc---ccccCCCceEEec----cCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCc------------
Q psy14941 342 IRTSSWMPQR---DIFAHPNMKLFIS----HGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKA------------ 402 (513)
Q Consensus 342 v~~~~~~pq~---~lL~h~~~~~~It----hgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~------------ 402 (513)
+.+.+|+|+. +++ .++++++. -|..+++.||+++|+|+|+... ......+.+...
T Consensus 256 v~~~g~~~~~~~~~~~--~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 256 MINRTVLTDERVDMMY--NACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSGDCVYKIKPSAWISVD 329 (413)
T ss_dssp EEECSCCCHHHHHHHH--HHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCTTTSEEECCCEEEECT
T ss_pred eeccCcCCHHHHHHHH--HhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHccCcccccccccccccc
Confidence 7888999965 456 67788884 2334689999999999999753 344444443222
Q ss_pred ---EE--EeccCCCCHHHHHHHHHHhc-CHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q psy14941 403 ---GK--LLPYLEITEETVSDALKIVL-SPEYKENAEDLGTRFRDRPQSPLEVAIYWIE 455 (513)
Q Consensus 403 ---G~--~l~~~~~~~~~l~~ai~~ll-~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie 455 (513)
|. .++. -+.+++.++| +++ |++.++++.+-+.....+.++....+..+.+
T Consensus 330 ~~~G~~gl~~~--~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~ 385 (413)
T 3oy2_A 330 DRDGIGGIEGI--IDVDDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIID 385 (413)
T ss_dssp TTCSSCCEEEE--CCHHHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHH
T ss_pred cccCcceeeCC--CCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 44 5552 3899999999 999 9888777776666554343454444444333
No 39
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.94 E-value=2.1e-08 Score=99.09 Aligned_cols=154 Identities=16% Similarity=0.152 Sum_probs=101.5
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcC----CC-eEEEEEcCCC-----CCCC--CCCCcEEEecCCCcc---c
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKI----PQ-RVLWKFEDND-----TSIF--KPYKNIRTSSWMPQR---D 352 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~----~~-~~i~~~~~~~-----~~~~--~~~~nv~~~~~~pq~---~ 352 (513)
++++++++.|...+ ..+....+++++.++ +. ++++..+.+. ..+. . .+||.+.+++++. +
T Consensus 204 ~~~~vl~~~gr~~~----~~K~~~~li~a~~~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~-~~~v~~~g~~~~~~~~~ 278 (375)
T 3beo_A 204 NNRLVLMTAHRREN----LGEPMRNMFRAIKRLVDKHEDVQVVYPVHMNPVVRETANDILGD-YGRIHLIEPLDVIDFHN 278 (375)
T ss_dssp TSEEEEEECCCGGG----TTHHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTT-CTTEEEECCCCHHHHHH
T ss_pred CCCeEEEEeccccc----chhHHHHHHHHHHHHHhhCCCeEEEEeCCCCHHHHHHHHHHhhc-cCCEEEeCCCCHHHHHH
Confidence 45677777776541 114456677776543 33 5555322211 0000 2 3799998888764 6
Q ss_pred cccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc-CHHHHHH
Q psy14941 353 IFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-SPEYKEN 431 (513)
Q Consensus 353 lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-~~~y~~~ 431 (513)
++ ..+++||+..| +.+.||+++|+|+|+.+..+... .+.+.|.|+.++ . +.+++.++|.+++ |++.+++
T Consensus 279 ~~--~~ad~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~~g~g~~v~--~-d~~~la~~i~~ll~~~~~~~~ 348 (375)
T 3beo_A 279 VA--ARSYLMLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIEAGTLKLAG--T-DEETIFSLADELLSDKEAHDK 348 (375)
T ss_dssp HH--HTCSEEEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHHTTSEEECC--S-CHHHHHHHHHHHHHCHHHHHH
T ss_pred HH--HhCcEEEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeecCCceEEcC--C-CHHHHHHHHHHHHhChHhHhh
Confidence 66 77899999874 55899999999999996544432 245678999886 2 8899999999999 9887776
Q ss_pred HHHHHHHHhcCCCChHHHHHHHHHHHH
Q psy14941 432 AEDLGTRFRDRPQSPLEVAIYWIEYVI 458 (513)
Q Consensus 432 a~~~~~~~~~~~~~~~~~a~~~ie~~~ 458 (513)
+.+-+..+.++ ...++.++.++.++
T Consensus 349 ~~~~~~~~~~~--~~~~~i~~~~~~~~ 373 (375)
T 3beo_A 349 MSKASNPYGDG--RASERIVEAILKHF 373 (375)
T ss_dssp HCCCCCTTCCS--CHHHHHHHHHHHHT
T ss_pred hhhcCCCCCCC--cHHHHHHHHHHHHh
Confidence 65544444322 56677777666554
No 40
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.77 E-value=1.3e-08 Score=100.80 Aligned_cols=155 Identities=12% Similarity=0.054 Sum_probs=105.0
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcC----CCeEEEEEcCC------CC---CCCCCCCcEEEecCCCcc---
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKI----PQRVLWKFEDN------DT---SIFKPYKNIRTSSWMPQR--- 351 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~------~~---~~~~~~~nv~~~~~~pq~--- 351 (513)
.++.++++.|...+ ....+.+..+++++.++ +..+++...+. +. .. . .+|+++.+.+++.
T Consensus 202 ~~~~iLvt~hr~e~--~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~~~l~~~~~~~~-~-~~~v~l~~~lg~~~~~ 277 (385)
T 4hwg_A 202 PKQYFLISSHREEN--VDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTKKRLEDLEGFKE-L-GDKIRFLPAFSFTDYV 277 (385)
T ss_dssp TTSEEEEEECCC-------CHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHTSGGGGG-T-GGGEEECCCCCHHHHH
T ss_pred cCCEEEEEeCCchh--cCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHHHHHHHHHHHhc-C-CCCEEEEcCCCHHHHH
Confidence 36788888776431 11235567777777654 34677765431 11 11 2 4689988777654
Q ss_pred ccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc-CHHHHH
Q psy14941 352 DIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-SPEYKE 430 (513)
Q Consensus 352 ~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-~~~y~~ 430 (513)
.++ ..++++||-.|. .+.||.+.|+|+|.++-..+.+. ..+.|.++.+. .+.++|.+++.+++ |+..++
T Consensus 278 ~l~--~~adlvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~G~~~lv~---~d~~~i~~ai~~ll~d~~~~~ 347 (385)
T 4hwg_A 278 KLQ--MNAFCILSDSGT-ITEEASILNLPALNIREAHERPE----GMDAGTLIMSG---FKAERVLQAVKTITEEHDNNK 347 (385)
T ss_dssp HHH--HHCSEEEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHHTCCEECC---SSHHHHHHHHHHHHTTCBTTB
T ss_pred HHH--HhCcEEEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhcCceEEcC---CCHHHHHHHHHHHHhChHHHH
Confidence 567 778999999875 57999999999999987554222 25678887775 27899999999999 876554
Q ss_pred HHHHHHHHH-hcCCCChHHHHHHHHHHHH
Q psy14941 431 NAEDLGTRF-RDRPQSPLEVAIYWIEYVI 458 (513)
Q Consensus 431 ~a~~~~~~~-~~~~~~~~~~a~~~ie~~~ 458 (513)
++.+.+..+ .+. ++.++.++.++..+
T Consensus 348 ~m~~~~~~~~g~g--~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 348 RTQGLVPDYNEAG--LVSKKILRIVLSYV 374 (385)
T ss_dssp CCSCCCHHHHTCC--CHHHHHHHHHHHHH
T ss_pred HhhccCCCCCCCC--hHHHHHHHHHHHHh
Confidence 444434445 555 78888888887654
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.73 E-value=9.4e-07 Score=90.52 Aligned_cols=146 Identities=11% Similarity=0.041 Sum_probs=92.4
Q ss_pred ceEEEEeCcccccCCCCHHHHHHHHHHHhcC---CCeEEEEEcCCC-----C----CCCCCCCcEE-EecCCCcc---cc
Q psy14941 290 GVIYFSMGSMLKTSSFPPDKFKAFLKAFSKI---PQRVLWKFEDND-----T----SIFKPYKNIR-TSSWMPQR---DI 353 (513)
Q Consensus 290 ~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~-----~----~~~~~~~nv~-~~~~~pq~---~l 353 (513)
..+++..|... +.+-...+++++..+ +.++++.-+++. + .+ . ++||. +.++ ++. ++
T Consensus 291 ~~~i~~vGrl~-----~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~-~-~~~v~~~~g~-~~~~~~~~ 362 (485)
T 1rzu_A 291 SPLFCVISRLT-----WQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASR-H-HGRVGVAIGY-NEPLSHLM 362 (485)
T ss_dssp SCEEEEESCBS-----TTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHH-T-TTTEEEEESC-CHHHHHHH
T ss_pred CeEEEEEccCc-----cccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHh-C-CCcEEEecCC-CHHHHHHH
Confidence 45788888876 344455566665544 446666544321 1 11 3 46887 6777 543 45
Q ss_pred ccCCCceEEecc----CCcccHHHHHHcCcceEeeccccCcHHHHHHHHHc---------CcEEEeccCCCCHHHHHHHH
Q psy14941 354 FAHPNMKLFISH----GGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESL---------KAGKLLPYLEITEETVSDAL 420 (513)
Q Consensus 354 L~h~~~~~~Ith----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~---------G~G~~l~~~~~~~~~l~~ai 420 (513)
+ ..++++|.- |..+++.||+++|+|+|+... ......+++. +.|..++ .-+.+++.++|
T Consensus 363 ~--~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~--~~d~~~la~~i 434 (485)
T 1rzu_A 363 Q--AGCDAIIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVIDANHAALASKAATGVQFS--PVTLDGLKQAI 434 (485)
T ss_dssp H--HHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEES--SCSHHHHHHHH
T ss_pred H--hcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecccccccccccCCcceEeC--CCCHHHHHHHH
Confidence 6 678888843 335789999999999999854 3455555554 6888887 34789999999
Q ss_pred HHhc----CHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Q psy14941 421 KIVL----SPEYKENAEDLGTRFRDRPQSPLEVAIYWI 454 (513)
Q Consensus 421 ~~ll----~~~y~~~a~~~~~~~~~~~~~~~~~a~~~i 454 (513)
.+++ |++.++++.+-+. .+.++-...+..+.
T Consensus 435 ~~ll~~~~~~~~~~~~~~~~~---~~~fs~~~~~~~~~ 469 (485)
T 1rzu_A 435 RRTVRYYHDPKLWTQMQKLGM---KSDVSWEKSAGLYA 469 (485)
T ss_dssp HHHHHHHTCHHHHHHHHHHHH---TCCCBHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHH---HHhCChHHHHHHHH
Confidence 9987 5665555544332 24445444444433
No 42
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.72 E-value=2.1e-07 Score=99.97 Aligned_cols=155 Identities=12% Similarity=0.070 Sum_probs=97.3
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCC-----eEEEEEcCCC--------------C------CCCCCCCcE
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQ-----RVLWKFEDND--------------T------SIFKPYKNI 342 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~--------------~------~~~~~~~nv 342 (513)
.++.+++..|... +.+-...+++++.++.. ++++.-++.. + .+ + .++|
T Consensus 570 ~~~~vIl~vGRl~-----~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lg-L-~~~V 642 (816)
T 3s28_A 570 KKKPILFTMARLD-----RVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYK-L-NGQF 642 (816)
T ss_dssp TTSCEEEEECCCC-----TTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTT-C-BBBE
T ss_pred CCCeEEEEEccCc-----ccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcC-C-CCcE
Confidence 3466788888876 55667778888877642 5555544331 0 12 3 5899
Q ss_pred EEecCCC----ccccccC-C-CceEEecc----CCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCC
Q psy14941 343 RTSSWMP----QRDIFAH-P-NMKLFISH----GGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEIT 412 (513)
Q Consensus 343 ~~~~~~p----q~~lL~h-~-~~~~~Ith----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~ 412 (513)
.+.++.+ +.++... . .+++||.- |-..++.||+++|+|+|+... ......+++.+.|+.++.. +
T Consensus 643 ~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~----GG~~EiV~dg~~Gllv~p~--D 716 (816)
T 3s28_A 643 RWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVHGKSGFHIDPY--H 716 (816)
T ss_dssp EEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESS----BTHHHHCCBTTTBEEECTT--S
T ss_pred EEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCC----CChHHHHccCCcEEEeCCC--C
Confidence 9998654 3444411 1 45777743 334789999999999999743 3455556666789988743 6
Q ss_pred HHHHHHHH----HHhc-CHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q psy14941 413 EETVSDAL----KIVL-SPEYKENAEDLGTRFRDRPQSPLEVAIYWIE 455 (513)
Q Consensus 413 ~~~l~~ai----~~ll-~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie 455 (513)
.+++.++| .+++ |++.++++.+-+.....+.++-...+..+++
T Consensus 717 ~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~ 764 (816)
T 3s28_A 717 GDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLT 764 (816)
T ss_dssp HHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 78888888 4555 7776666665555443223354444444333
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.71 E-value=9.8e-07 Score=90.42 Aligned_cols=148 Identities=8% Similarity=-0.013 Sum_probs=93.6
Q ss_pred CceEEEEeCcccccCCCCHHHHHHHHHHHhcC---CCeEEEEEcCCC-----C----CCCCCCCcEE-EecCCCcc---c
Q psy14941 289 NGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKI---PQRVLWKFEDND-----T----SIFKPYKNIR-TSSWMPQR---D 352 (513)
Q Consensus 289 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~-----~----~~~~~~~nv~-~~~~~pq~---~ 352 (513)
+..+++..|... +.+-...+++++..+ +.++++.-+++. + .+ . +++|. +.++ +.. +
T Consensus 291 ~~~~i~~vGrl~-----~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~-~-~~~v~~~~g~-~~~~~~~ 362 (485)
T 2qzs_A 291 KVPLFAVVSRLT-----SQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAE-Y-PGQVGVQIGY-HEAFSHR 362 (485)
T ss_dssp TSCEEEEEEEES-----GGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHH-S-TTTEEEEESC-CHHHHHH
T ss_pred CCeEEEEeccCc-----cccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHh-C-CCcEEEeCCC-CHHHHHH
Confidence 456777888875 344555666666554 446665544321 1 12 3 46886 7777 443 5
Q ss_pred cccCCCceEEecc----CCcccHHHHHHcCcceEeeccccCcHHHHHHHHHc---------CcEEEeccCCCCHHHHHHH
Q psy14941 353 IFAHPNMKLFISH----GGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESL---------KAGKLLPYLEITEETVSDA 419 (513)
Q Consensus 353 lL~h~~~~~~Ith----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~---------G~G~~l~~~~~~~~~l~~a 419 (513)
++ ..++++|.- |..+++.||+++|+|+|+... ..+...+.+. +.|..++. -+.+++.++
T Consensus 363 ~~--~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~--~d~~~la~~ 434 (485)
T 2qzs_A 363 IM--GGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVASGFVFED--SNAWSLLRA 434 (485)
T ss_dssp HH--HHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEECS--SSHHHHHHH
T ss_pred HH--HhCCEEEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccceEEECC--CCHHHHHHH
Confidence 66 678888843 335788999999999999854 3455555544 68888873 378999999
Q ss_pred HHHhc----CHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q psy14941 420 LKIVL----SPEYKENAEDLGTRFRDRPQSPLEVAIYWIE 455 (513)
Q Consensus 420 i~~ll----~~~y~~~a~~~~~~~~~~~~~~~~~a~~~ie 455 (513)
|.+++ |++.++++.+-+. .+.++-...+..+.+
T Consensus 435 i~~ll~~~~~~~~~~~~~~~~~---~~~fs~~~~~~~~~~ 471 (485)
T 2qzs_A 435 IRRAFVLWSRPSLWRFVQRQAM---AMDFSWQVAAKSYRE 471 (485)
T ss_dssp HHHHHHHHTSHHHHHHHHHHHH---HCCCCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHH---hhcCCHHHHHHHHHH
Confidence 99987 5665555544443 244454444444433
No 44
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.62 E-value=8.6e-08 Score=84.02 Aligned_cols=134 Identities=18% Similarity=0.260 Sum_probs=95.5
Q ss_pred CceEEEEeCcccccCCCCHHHHHHHHHHHhcCCC-eEEEEEcCCCCCC----------CCCCCcEEEecCCCc---cccc
Q psy14941 289 NGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQ-RVLWKFEDNDTSI----------FKPYKNIRTSSWMPQ---RDIF 354 (513)
Q Consensus 289 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~----------~~~~~nv~~~~~~pq---~~lL 354 (513)
+..+++..|+.. +.+....+++++.+++. ++++.-.+..... .+ ++||.+.+|+|+ .+++
T Consensus 22 ~~~~i~~~G~~~-----~~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l-~~~v~~~g~~~~~e~~~~~ 95 (177)
T 2f9f_A 22 YGDFWLSVNRIY-----PEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIA-PDNVKFLGSVSEEELIDLY 95 (177)
T ss_dssp CCSCEEEECCSS-----GGGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHS-CTTEEEEESCCHHHHHHHH
T ss_pred CCCEEEEEeccc-----cccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhccc-CCcEEEeCCCCHHHHHHHH
Confidence 344566778775 45667788888888855 6666544332111 13 469999999998 4677
Q ss_pred cCCCceEEec---cCCc-ccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc-CHHH-
Q psy14941 355 AHPNMKLFIS---HGGL-LGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-SPEY- 428 (513)
Q Consensus 355 ~h~~~~~~It---hgG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-~~~y- 428 (513)
..++++|. +.|. +++.||+++|+|+|+.+ ...+...+++.+.|..+ .-+.+++.++|.+++ |+.+
T Consensus 96 --~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~~~g~~~---~~d~~~l~~~i~~l~~~~~~~ 166 (177)
T 2f9f_A 96 --SRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINEKTGYLV---NADVNEIIDAMKKVSKNPDKF 166 (177)
T ss_dssp --HHCSEEEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBTTTEEEE---CSCHHHHHHHHHHHHHCTTTT
T ss_pred --HhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCCCccEEe---CCCHHHHHHHHHHHHhCHHHH
Confidence 67788886 3343 58999999999999985 35566666667788887 237899999999999 8765
Q ss_pred HHHHHHHHH
Q psy14941 429 KENAEDLGT 437 (513)
Q Consensus 429 ~~~a~~~~~ 437 (513)
++++++.++
T Consensus 167 ~~~~~~~a~ 175 (177)
T 2f9f_A 167 KKDCFRRAK 175 (177)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 666666554
No 45
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.34 E-value=0.0001 Score=73.43 Aligned_cols=159 Identities=14% Similarity=0.083 Sum_probs=95.8
Q ss_pred hcCccEEEEeccCccCCCccCCCceEEeCcccccCCCCCcHHHHHHhh-cCCCceEEEEeCcccccCCCCHHHHHHHHHH
Q psy14941 238 LNTCSLTLVNTHHTINIARPLPANVVEIGGIHVKPAKKLNEEMERFLN-ESHNGVIYFSMGSMLKTSSFPPDKFKAFLKA 316 (513)
Q Consensus 238 ~~~~~l~l~~s~~~l~~~~p~~p~~~~vG~l~~~~~~~l~~~l~~~l~-~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~ 316 (513)
.+.+|.+++.|....+.-.... ++..|.. .++. +....--. ..+++.+++..|+... .+.. +..
T Consensus 176 ~~~ad~vi~~S~~~~~~~~~~~-~i~vipn-gvd~-----~~f~~~~~~~~~~~~~i~~vGrl~~----~Kg~----~~~ 240 (406)
T 2hy7_A 176 APTLDVIALVSPAMAAEVVSRD-NVFHVGH-GVDH-----NLDQLGDPSPYAEGIHAVAVGSMLF----DPEF----FVV 240 (406)
T ss_dssp GGGCSEEEESCGGGGGGCSCST-TEEECCC-CBCT-----THHHHHCSCSCCSSEEEEEECCTTB----CHHH----HHH
T ss_pred HHhCCEEEEcCHHHHHHHHhcC-CEEEEcC-CcCh-----HhcCcccccccCCCcEEEEEecccc----ccCH----HHH
Confidence 3557888888877655543332 4433321 1111 01110000 1123367788898862 3333 333
Q ss_pred H-hcCCC-eEEEEEcCCCCCC-CCCCCcEEEecCCCcc---ccccCCCceEEec---c-CCcccHHHHH-------HcCc
Q psy14941 317 F-SKIPQ-RVLWKFEDNDTSI-FKPYKNIRTSSWMPQR---DIFAHPNMKLFIS---H-GGLLGITEAV-------YEGI 379 (513)
Q Consensus 317 ~-~~~~~-~~i~~~~~~~~~~-~~~~~nv~~~~~~pq~---~lL~h~~~~~~It---h-gG~~s~~Eal-------~~Gv 379 (513)
+ ++.+. ++++. |+....+ .+ .+||.+.+++|+. +++ ..+++++. . |-.+++.||+ ++|+
T Consensus 241 l~~~~~~~~l~iv-G~g~~~~~~l-~~~V~f~G~~~~~~l~~~~--~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~ 316 (406)
T 2hy7_A 241 ASKAFPQVTFHVI-GSGMGRHPGY-GDNVIVYGEMKHAQTIGYI--KHARFGIAPYASEQVPVYLADSSMKLLQYDFFGL 316 (406)
T ss_dssp HHHHCTTEEEEEE-SCSSCCCTTC-CTTEEEECCCCHHHHHHHH--HTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTC
T ss_pred HHHhCCCeEEEEE-eCchHHhcCC-CCCEEEcCCCCHHHHHHHH--HhcCEEEECCCcccCchHHHHHHHHHHHHhhCCC
Confidence 3 33444 55554 4322222 14 7899999999875 456 67788874 2 3346789999 9999
Q ss_pred ceEeeccccCcHHHHHHHHHcCcEEE-eccCCCCHHHHHHHHHHhc-CHH
Q psy14941 380 PVLGIPVFGDQWANIKKLESLKAGKL-LPYLEITEETVSDALKIVL-SPE 427 (513)
Q Consensus 380 P~i~~P~~~DQ~~na~~~~~~G~G~~-l~~~~~~~~~l~~ai~~ll-~~~ 427 (513)
|+|+... +.....|.. ++.+ +.+++.++|.+++ |+.
T Consensus 317 PVIas~~----------v~~~~~G~l~v~~~--d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 317 PAVCPNA----------VVGPYKSRFGYTPG--NADSVIAAITQALEAPR 354 (406)
T ss_dssp CEEEEGG----------GTCSCSSEEEECTT--CHHHHHHHHHHHHHCCC
T ss_pred cEEEehh----------cccCcceEEEeCCC--CHHHHHHHHHHHHhCcc
Confidence 9999865 455556877 7643 7899999999999 766
No 46
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=98.02 E-value=0.00016 Score=74.68 Aligned_cols=124 Identities=10% Similarity=0.029 Sum_probs=81.8
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcC---CCeEEEEEcCCCC---------CCCCCCCcEEEecCCCcc---c
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKI---PQRVLWKFEDNDT---------SIFKPYKNIRTSSWMPQR---D 352 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~---------~~~~~~~nv~~~~~~pq~---~ 352 (513)
++..+++..|... +.+-...+++++.++ +.++++...++.. .. . +.++.+....++. .
T Consensus 325 ~~~p~i~~vgRl~-----~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~~~ 397 (536)
T 3vue_A 325 RKIPLIAFIGRLE-----EQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEK-Y-PGKVRAVVKFNAPLAHL 397 (536)
T ss_dssp TTSCEEEEECCBS-----GGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHH-S-TTTEEEECSCCHHHHHH
T ss_pred CCCcEEEEEeecc-----ccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhh-c-CCceEEEEeccHHHHHH
Confidence 3556777788876 556667777777654 3366655444320 12 4 6788888888765 3
Q ss_pred cccCCCceEEeccC----CcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccC--------CCCHHHHHHHH
Q psy14941 353 IFAHPNMKLFISHG----GLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYL--------EITEETVSDAL 420 (513)
Q Consensus 353 lL~h~~~~~~Ithg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~--------~~~~~~l~~ai 420 (513)
++ ..+++|+.-. =..+++||+++|+|+|+... ......+++..-|...... ..+.+.|.++|
T Consensus 398 ~~--~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai 471 (536)
T 3vue_A 398 IM--AGADVLAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATL 471 (536)
T ss_dssp HH--HHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHH
T ss_pred HH--HhhheeecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCCCCccccccCCCceeEECCCCHHHHHHHH
Confidence 55 6778888642 23689999999999999743 4566666665567644321 23578899999
Q ss_pred HHhc
Q psy14941 421 KIVL 424 (513)
Q Consensus 421 ~~ll 424 (513)
++++
T Consensus 472 ~ral 475 (536)
T 3vue_A 472 KRAI 475 (536)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
No 47
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.78 E-value=5.1e-05 Score=65.06 Aligned_cols=131 Identities=12% Similarity=0.104 Sum_probs=79.5
Q ss_pred ceEEEEeCcccccCCCCHHHHHHHHHHHhcCCC----eEEEEEcCCCC-CC------CCCCCcEEEecCCCcc---cccc
Q psy14941 290 GVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQ----RVLWKFEDNDT-SI------FKPYKNIRTSSWMPQR---DIFA 355 (513)
Q Consensus 290 ~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~-~~------~~~~~nv~~~~~~pq~---~lL~ 355 (513)
+++++..|+.. +.+-...+++++..+.. ++++ ++.... .. .. ..++.+ +|+|+. +++
T Consensus 2 ~~~i~~~G~~~-----~~Kg~~~li~a~~~l~~~~~~~l~i-~G~g~~~~~~~~~~~~~-~~~v~~-g~~~~~~~~~~~- 72 (166)
T 3qhp_A 2 PFKIAMVGRYS-----NEKNQSVLIKAVALSKYKQDIVLLL-KGKGPDEKKIKLLAQKL-GVKAEF-GFVNSNELLEIL- 72 (166)
T ss_dssp CEEEEEESCCS-----TTTTHHHHHHHHHTCTTGGGEEEEE-ECCSTTHHHHHHHHHHH-TCEEEC-CCCCHHHHHHHH-
T ss_pred ceEEEEEeccc-----hhcCHHHHHHHHHHhccCCCeEEEE-EeCCccHHHHHHHHHHc-CCeEEE-eecCHHHHHHHH-
Confidence 56777777775 44556677777776642 3333 333211 00 02 337888 999865 556
Q ss_pred CCCceEEec----cCCcccHHHHHHcCc-ceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc-CHHHH
Q psy14941 356 HPNMKLFIS----HGGLLGITEAVYEGI-PVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-SPEYK 429 (513)
Q Consensus 356 h~~~~~~It----hgG~~s~~Eal~~Gv-P~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-~~~y~ 429 (513)
.+++++|. -|..+++.||+++|+ |+|+....+. ....+.+.|. .++ .-+.+++.++|.+++ |++.+
T Consensus 73 -~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~~~~~~--~~~--~~~~~~l~~~i~~l~~~~~~~ 144 (166)
T 3qhp_A 73 -KTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFALDERS--LFE--PNNAKDLSAKIDWWLENKLER 144 (166)
T ss_dssp -TTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGCSSGGG--EEC--TTCHHHHHHHHHHHHHCHHHH
T ss_pred -HhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhccCCce--EEc--CCCHHHHHHHHHHHHhCHHHH
Confidence 77888886 233468999999996 9999432111 1111112222 333 337999999999999 98765
Q ss_pred HHHHHHHH
Q psy14941 430 ENAEDLGT 437 (513)
Q Consensus 430 ~~a~~~~~ 437 (513)
+++.+-+.
T Consensus 145 ~~~~~~~~ 152 (166)
T 3qhp_A 145 ERMQNEYA 152 (166)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55544443
No 48
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.75 E-value=0.00044 Score=72.06 Aligned_cols=159 Identities=13% Similarity=0.133 Sum_probs=98.3
Q ss_pred CceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEc-CCCC----------CCCCCC-CcEEEecCCCcc---cc
Q psy14941 289 NGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFE-DNDT----------SIFKPY-KNIRTSSWMPQR---DI 353 (513)
Q Consensus 289 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~----------~~~~~~-~nv~~~~~~pq~---~l 353 (513)
+.+|+ ..|.... +.....++.+.....+.|.-.++.++ +... .+ + . ++|++.+++|+. ++
T Consensus 376 ~~~v~-~~g~~~~--K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~-l-~~~~v~~~g~~~~~~~~~~ 450 (568)
T 2vsy_A 376 QGVVL-CCFNNSY--KLNPQSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQG-V-DAQRLVFMPKLPHPQYLAR 450 (568)
T ss_dssp TSCEE-EECCCGG--GCCHHHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTT-C-CGGGEEEECCCCHHHHHHH
T ss_pred CCEEE-EeCCccc--cCCHHHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcC-C-ChhHEEeeCCCCHHHHHHH
Confidence 34444 5566653 44455555555555555653445555 3221 12 3 4 899999999854 45
Q ss_pred ccCCCceEEec---cCCcccHHHHHHcCcceEeeccccC-cHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc-CHHH
Q psy14941 354 FAHPNMKLFIS---HGGLLGITEAVYEGIPVLGIPVFGD-QWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-SPEY 428 (513)
Q Consensus 354 L~h~~~~~~It---hgG~~s~~Eal~~GvP~i~~P~~~D-Q~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-~~~y 428 (513)
+ ..+|+|+. .|+.+++.||+++|+|+|++|-..= -...+..+...|+...+.. +.+++.+++.+++ |++.
T Consensus 451 ~--~~adv~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~---~~~~la~~i~~l~~~~~~ 525 (568)
T 2vsy_A 451 Y--RHADLFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA---DDAAFVAKAVALASDPAA 525 (568)
T ss_dssp G--GGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS---SHHHHHHHHHHHHHCHHH
T ss_pred H--hcCCEEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC---CHHHHHHHHHHHhcCHHH
Confidence 6 67888872 3667889999999999999764210 1112344556677665542 8899999999999 9987
Q ss_pred HHHHHHHHHHHh--cCCCChHHHHHHHHHHHH
Q psy14941 429 KENAEDLGTRFR--DRPQSPLEVAIYWIEYVI 458 (513)
Q Consensus 429 ~~~a~~~~~~~~--~~~~~~~~~a~~~ie~~~ 458 (513)
++++.+-+.... .+.++. +..+..++.+.
T Consensus 526 ~~~~~~~~~~~~~~~~~f~~-~~~~~~~~~~y 556 (568)
T 2vsy_A 526 LTALHARVDVLRRASGVFHM-DGFADDFGALL 556 (568)
T ss_dssp HHHHHHHHHHHHHHSSTTCH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCCCH-HHHHHHHHHHH
Confidence 777766555443 333453 44444444443
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.70 E-value=0.0004 Score=74.24 Aligned_cols=165 Identities=13% Similarity=0.199 Sum_probs=114.9
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCCC-----------CCCCCCCcEEEecCCCccccc-c
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDNDT-----------SIFKPYKNIRTSSWMPQRDIF-A 355 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----------~~~~~~~nv~~~~~~pq~~lL-~ 355 (513)
++.++|.+|.+.. +..++.+..-.+-+++.|..++|....... .++. ++++.+.+..|..+.| .
T Consensus 521 ~~~v~f~~fN~~~---Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~-~~r~~f~~~~~~~~~l~~ 596 (723)
T 4gyw_A 521 EDAIVYCNFNQLY---KIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLP-QNRIIFSPVAPKEEHVRR 596 (723)
T ss_dssp TTSEEEECCSCGG---GCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCC-GGGEEEEECCCHHHHHHH
T ss_pred CCCEEEEeCCccc---cCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCC-cCeEEECCCCCHHHHHHH
Confidence 4568888887776 789999999999999999988888765321 1223 7889999999977655 3
Q ss_pred CCCceEEec---cCCcccHHHHHHcCcceEeeccc-cCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc-CHHHHH
Q psy14941 356 HPNMKLFIS---HGGLLGITEAVYEGIPVLGIPVF-GDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-SPEYKE 430 (513)
Q Consensus 356 h~~~~~~It---hgG~~s~~Eal~~GvP~i~~P~~-~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-~~~y~~ 430 (513)
+..+|+++- .+|.+|+.||++.|||+|.+|-- .--..-+..+...|+...+- -|.++-.+.--++- |+++.+
T Consensus 597 ~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia---~~~~~Y~~~a~~la~d~~~l~ 673 (723)
T 4gyw_A 597 GQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIA---KNRQEYEDIAVKLGTDLEYLK 673 (723)
T ss_dssp GGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBC---SSHHHHHHHHHHHHHCHHHHH
T ss_pred hCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCccccc---CCHHHHHHHHHHHhcCHHHHH
Confidence 577888876 78889999999999999999842 22334455566678765553 25666555555666 877666
Q ss_pred HHH-HHHHHHhcCCCChHHHHHHHHHHHHH
Q psy14941 431 NAE-DLGTRFRDRPQSPLEVAIYWIEYVIK 459 (513)
Q Consensus 431 ~a~-~~~~~~~~~~~~~~~~a~~~ie~~~~ 459 (513)
..+ ++.+.....|.--.+..+..+|.+.+
T Consensus 674 ~lr~~l~~~~~~s~l~d~~~~~~~le~a~~ 703 (723)
T 4gyw_A 674 KVRGKVWKQRISSPLFNTKQYTMELERLYL 703 (723)
T ss_dssp HHHHHHHHHHHHSSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCcCHHHHHHHHHHHHH
Confidence 554 34444444443334556666776654
No 50
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.55 E-value=0.00091 Score=59.02 Aligned_cols=87 Identities=14% Similarity=0.126 Sum_probs=64.6
Q ss_pred cEEE-ecCCCcc---ccccCCCceEEeccC---C-cccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCC
Q psy14941 341 NIRT-SSWMPQR---DIFAHPNMKLFISHG---G-LLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEIT 412 (513)
Q Consensus 341 nv~~-~~~~pq~---~lL~h~~~~~~Ithg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~ 412 (513)
||.+ .+++|+. +++ ..++++|.-. | .+++.||+++|+|+|+... ..+...+ ..+.|..++. -+
T Consensus 96 ~v~~~~g~~~~~~~~~~~--~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~~~g~~~~~--~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELY--GSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TNETGILVKA--GD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHH--TTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CTTTCEEECT--TC
T ss_pred CEEEEeccCCHHHHHHHH--HHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CCCceEEecC--CC
Confidence 8999 9999854 666 7788888543 2 4678999999999999853 4555556 6677888873 37
Q ss_pred HHHHHHHHHHhc--CHHHHHHHHHHH
Q psy14941 413 EETVSDALKIVL--SPEYKENAEDLG 436 (513)
Q Consensus 413 ~~~l~~ai~~ll--~~~y~~~a~~~~ 436 (513)
.+++.++|.+++ |+..++++.+-+
T Consensus 167 ~~~l~~~i~~l~~~~~~~~~~~~~~a 192 (200)
T 2bfw_A 167 PGELANAILKALELSRSDLSKFRENC 192 (200)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 899999999998 666555444433
No 51
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.50 E-value=7.6e-05 Score=73.49 Aligned_cols=92 Identities=20% Similarity=0.137 Sum_probs=67.9
Q ss_pred CcEEEecCCCcc-ccccCCCceEEecc-----CCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCH
Q psy14941 340 KNIRTSSWMPQR-DIFAHPNMKLFISH-----GGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITE 413 (513)
Q Consensus 340 ~nv~~~~~~pq~-~lL~h~~~~~~Ith-----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~ 413 (513)
.++.+.++..+. .++ ..+++++.- +|..++.||+++|+|+|+-|..++.......+.+.|.++... +.
T Consensus 260 ~~v~~~~~~~dl~~~y--~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~----d~ 333 (374)
T 2xci_A 260 GDVILVDRFGILKELY--PVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVK----NE 333 (374)
T ss_dssp SSEEECCSSSCHHHHG--GGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECC----SH
T ss_pred CcEEEECCHHHHHHHH--HhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEeC----CH
Confidence 457776655443 566 788986542 345889999999999998887777777777666788888764 78
Q ss_pred HHHHHHHHHhc-CHHHHHHHHHHHHH
Q psy14941 414 ETVSDALKIVL-SPEYKENAEDLGTR 438 (513)
Q Consensus 414 ~~l~~ai~~ll-~~~y~~~a~~~~~~ 438 (513)
++|.++|.+++ | +.++++.+-+..
T Consensus 334 ~~La~ai~~ll~d-~~r~~mg~~ar~ 358 (374)
T 2xci_A 334 TELVTKLTELLSV-KKEIKVEEKSRE 358 (374)
T ss_dssp HHHHHHHHHHHHS-CCCCCHHHHHHH
T ss_pred HHHHHHHHHHHhH-HHHHHHHHHHHH
Confidence 99999999999 8 755554444433
No 52
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.47 E-value=0.00092 Score=68.72 Aligned_cols=138 Identities=9% Similarity=0.066 Sum_probs=96.4
Q ss_pred ceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEE--EcCCC-CC----------CCCCCCcEEEecCCCcccccc-
Q psy14941 290 GVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWK--FEDND-TS----------IFKPYKNIRTSSWMPQRDIFA- 355 (513)
Q Consensus 290 ~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~-~~----------~~~~~~nv~~~~~~pq~~lL~- 355 (513)
.++|.+|+... +..++.++...+.+++.|..++|. .+.+. .. + + .+.+.+.+.+|..+.++
T Consensus 441 ~v~Fg~fn~~~---Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~G-I-~~Rv~F~g~~p~~e~la~ 515 (631)
T 3q3e_A 441 VVNIGIASTTM---KLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSY-L-GDSATAHPHSPYHQYLRI 515 (631)
T ss_dssp EEEEEEEECST---TCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHH-H-GGGEEEECCCCHHHHHHH
T ss_pred eEEEEECCccc---cCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcC-C-CccEEEcCCCCHHHHHHH
Confidence 57787777765 788999999999999999877764 34221 11 1 3 47899999999765442
Q ss_pred CCCceEEecc---CCcccHHHHHHcCcceEeecccc-CcHHHHHHHHHcCcEEE-eccCCCCHHHHHHHHHHhc-CHHHH
Q psy14941 356 HPNMKLFISH---GGLLGITEAVYEGIPVLGIPVFG-DQWANIKKLESLKAGKL-LPYLEITEETVSDALKIVL-SPEYK 429 (513)
Q Consensus 356 h~~~~~~Ith---gG~~s~~Eal~~GvP~i~~P~~~-DQ~~na~~~~~~G~G~~-l~~~~~~~~~l~~ai~~ll-~~~y~ 429 (513)
+..+|+|+.- +|.+|+.||+++|||+|..+--. -...-+..+...|+... +. -+.++..+...++. |++.+
T Consensus 516 y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA---~d~eeYv~~Av~La~D~~~l 592 (631)
T 3q3e_A 516 LHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA---NTVDEYVERAVRLAENHQER 592 (631)
T ss_dssp HHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE---SSHHHHHHHHHHHHHCHHHH
T ss_pred HhcCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec---CCHHHHHHHHHHHhCCHHHH
Confidence 3567777643 77899999999999999997432 11222334556787642 32 16888888888888 98876
Q ss_pred HHHHHH
Q psy14941 430 ENAEDL 435 (513)
Q Consensus 430 ~~a~~~ 435 (513)
+++++-
T Consensus 593 ~~LR~~ 598 (631)
T 3q3e_A 593 LELRRY 598 (631)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666543
No 53
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.14 E-value=0.00087 Score=64.67 Aligned_cols=130 Identities=14% Similarity=0.088 Sum_probs=86.9
Q ss_pred CceEEEEeCcccccCCCCHHHHHHHHHHHhcC-CC-eEEEEEcCCCCCCCCCCCcEEEecCCCcccccc---CCCceEEe
Q psy14941 289 NGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKI-PQ-RVLWKFEDNDTSIFKPYKNIRTSSWMPQRDIFA---HPNMKLFI 363 (513)
Q Consensus 289 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~-~~-~~i~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~---h~~~~~~I 363 (513)
.+.+++-.|+... . +.+..+ +. +++.. |+....+ + + ||.+.+|+|+.++.. .....++.
T Consensus 177 ~~~~i~yaG~l~k-----~-------~~L~~l~~~~~f~iv-G~G~~~~-l-~-nV~f~G~~~~~el~~~l~~~~~~lv~ 240 (339)
T 3rhz_A 177 LKREIHFPGNPER-----F-------SFVKEWKYDIPLKVY-TWQNVEL-P-Q-NVHKINYRPDEQLLMEMSQGGFGLVW 240 (339)
T ss_dssp EEEEEEECSCTTT-----C-------GGGGGCCCSSCEEEE-ESCCCCC-C-T-TEEEEECCCHHHHHHHHHTEEEEECC
T ss_pred CCcEEEEeCCcch-----h-------hHHHhCCCCCeEEEE-eCCcccC-c-C-CEEEeCCCCHHHHHHHHHhCCEEEEE
Confidence 3456677788762 1 122222 33 54444 4433234 5 6 999999999986642 22223333
Q ss_pred ccCC---------cccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc-C--HHHHHH
Q psy14941 364 SHGG---------LLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-S--PEYKEN 431 (513)
Q Consensus 364 thgG---------~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-~--~~y~~~ 431 (513)
+-+. -+-+.|++++|+|+|+.+ ...++..+++.|+|+.++ +.+++.++|.++. + .++++|
T Consensus 241 ~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~~~G~~~~----~~~e~~~~i~~l~~~~~~~m~~n 312 (339)
T 3rhz_A 241 MDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENNGLGWIVK----DVEEAIMKVKNVNEDEYIELVKN 312 (339)
T ss_dssp CCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHHTCEEEES----SHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhCCeEEEeC----CHHHHHHHHHHhCHHHHHHHHHH
Confidence 2222 234789999999999865 456788899999999997 5788999999877 4 467888
Q ss_pred HHHHHHHHhcC
Q psy14941 432 AEDLGTRFRDR 442 (513)
Q Consensus 432 a~~~~~~~~~~ 442 (513)
+++.++.++..
T Consensus 313 a~~~a~~~~~~ 323 (339)
T 3rhz_A 313 VRSFNPILRKG 323 (339)
T ss_dssp HHHHTHHHHTT
T ss_pred HHHHHHHhhcc
Confidence 88888888765
No 54
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=96.58 E-value=0.0029 Score=62.92 Aligned_cols=84 Identities=13% Similarity=0.027 Sum_probs=59.3
Q ss_pred CCcEEEecCCCcc---ccccCCCceEEeccC---C-cccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCC
Q psy14941 339 YKNIRTSSWMPQR---DIFAHPNMKLFISHG---G-LLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEI 411 (513)
Q Consensus 339 ~~nv~~~~~~pq~---~lL~h~~~~~~Ithg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~ 411 (513)
.++|.+.+++|+. +++ ..+++|+.-. | .+++.||+++|+|+|+- ..+ ....+++...|+.++. -
T Consensus 294 ~~~v~f~G~~~~~~l~~~~--~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g----~~e~v~~~~~G~lv~~--~ 364 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLL--KRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYE----NKDLSNWHSNIVSLEQ--L 364 (413)
T ss_dssp TEEEEEEESCCHHHHHHHH--HHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBT----TBCGGGTBTTEEEESS--C
T ss_pred cCcEEEcCCCCHHHHHHHH--HhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCC----cchhhhcCCCEEEeCC--C
Confidence 5789999999876 456 6788888532 3 35689999999999983 322 1233444557888874 4
Q ss_pred CHHHHHHHHHHhc-CHHHHHH
Q psy14941 412 TEETVSDALKIVL-SPEYKEN 431 (513)
Q Consensus 412 ~~~~l~~ai~~ll-~~~y~~~ 431 (513)
+.+++.++|.+++ |++.+++
T Consensus 365 d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 365 NPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp SHHHHHHHHHHHHHHTC----
T ss_pred CHHHHHHHHHHHHcCHHHHHH
Confidence 7899999999999 7766554
No 55
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.55 E-value=0.083 Score=50.99 Aligned_cols=132 Identities=16% Similarity=0.250 Sum_probs=78.5
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCCCC------CCCCCCc-EEEecCCC--c-cccccCC
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDNDTS------IFKPYKN-IRTSSWMP--Q-RDIFAHP 357 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~n-v~~~~~~p--q-~~lL~h~ 357 (513)
+++.|.+..|+.......+.+.+.++++.+.+.+.++++..++++.+ +.. +.+ +.+.+-.. + ..++ .
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~-~~~~~~l~g~~sl~e~~ali--~ 260 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQM-ETKPIVATGKFQLGPLAAAM--N 260 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTC-SSCCEECTTCCCHHHHHHHH--H
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhc-ccccEEeeCCCCHHHHHHHH--H
Confidence 46889999998766667888888999988876677777643333211 002 223 33333222 2 2667 7
Q ss_pred CceEEeccCCcccHHHHHHcCcceEee--ccc-------cC------cHHHHHHHHH---cCc--EEEeccCCCCHHHHH
Q psy14941 358 NMKLFISHGGLLGITEAVYEGIPVLGI--PVF-------GD------QWANIKKLES---LKA--GKLLPYLEITEETVS 417 (513)
Q Consensus 358 ~~~~~IthgG~~s~~Eal~~GvP~i~~--P~~-------~D------Q~~na~~~~~---~G~--G~~l~~~~~~~~~l~ 417 (513)
+++++|+.-. |.+.=|.+.|+|+|++ |.. ++ ...-|. +.. ..+ |-.--..+++.+++.
T Consensus 261 ~a~~~i~~Ds-G~~HlAaa~g~P~v~lfg~t~p~~~~P~~~~~~vl~~~~~C~-C~~~~~~~C~~~~~~Cm~~I~~~~V~ 338 (349)
T 3tov_A 261 RCNLLITNDS-GPMHVGISQGVPIVALYGPSNPFFYGPYQAHAIVLETMDSYE-IGKSMKKIIKEGNYKGLSVISEEQVI 338 (349)
T ss_dssp TCSEEEEESS-HHHHHHHTTTCCEEEECSSCCHHHHSCTTCSEEEECHHHHHH-HHHHTTCCCCGGGCSTTTTSCHHHHH
T ss_pred hCCEEEECCC-CHHHHHHhcCCCEEEEECCCCccccCCCCCCeEEEeCCCCcC-ccCCccCCCCCCccchhhcCCHHHHH
Confidence 8999999843 3333388899999997 211 11 112233 333 222 101112467888888
Q ss_pred HHHHHhc
Q psy14941 418 DALKIVL 424 (513)
Q Consensus 418 ~ai~~ll 424 (513)
+++++++
T Consensus 339 ~a~~~lL 345 (349)
T 3tov_A 339 KAAETLL 345 (349)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888876
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=95.13 E-value=0.67 Score=44.26 Aligned_cols=93 Identities=12% Similarity=0.060 Sum_probs=60.7
Q ss_pred CCceEEEEeCc-ccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCCC------CCCCCC----CcE-EEecCCC--c-cc
Q psy14941 288 HNGVIYFSMGS-MLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDNDT------SIFKPY----KNI-RTSSWMP--Q-RD 352 (513)
Q Consensus 288 ~~~~v~vs~Gs-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~----~nv-~~~~~~p--q-~~ 352 (513)
+++.|.+..|+ .......+.+.+.++++.+.+.+.++++..++++. .+.. + .++ .+.+..+ + ..
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~-~~~~~~~~~~l~g~~sl~e~~a 257 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAAL-NTEQQAWCRNLAGETQLDQAVI 257 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTS-CHHHHTTEEECTTTSCHHHHHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhh-hhccccceEeccCcCCHHHHHH
Confidence 46789999998 33445678888888888887667777775433321 1101 1 233 3333332 2 36
Q ss_pred cccCCCceEEeccCCcccHHHHHHcCcceEee
Q psy14941 353 IFAHPNMKLFISHGGLLGITEAVYEGIPVLGI 384 (513)
Q Consensus 353 lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~ 384 (513)
++ .+++++|+.-. |.+..|.+.|+|+|++
T Consensus 258 li--~~a~l~I~~Ds-g~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 258 LI--AACKAIVTNDS-GLMHVAAALNRPLVAL 286 (348)
T ss_dssp HH--HTSSEEEEESS-HHHHHHHHTTCCEEEE
T ss_pred HH--HhCCEEEecCC-HHHHHHHHcCCCEEEE
Confidence 77 78999999743 5566688999999996
No 57
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=88.61 E-value=1.6 Score=45.43 Aligned_cols=91 Identities=12% Similarity=0.096 Sum_probs=53.0
Q ss_pred EEecCCCccc---------cccCCCceEEeccC----CcccHHHHHHcCcceEeeccccCcHHHHHHHHHc-------Cc
Q psy14941 343 RTSSWMPQRD---------IFAHPNMKLFISHG----GLLGITEAVYEGIPVLGIPVFGDQWANIKKLESL-------KA 402 (513)
Q Consensus 343 ~~~~~~pq~~---------lL~h~~~~~~Ithg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~-------G~ 402 (513)
.+-.|++..+ ++ ..+++||.-. -..+.+||+++|+|+|+.-..+ ....+.+. +.
T Consensus 496 f~P~~L~~~d~lf~~d~~~~~--~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V~dg~~~~~~~~t 569 (725)
T 3nb0_A 496 FHPEFLNANNPILGLDYDEFV--RGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYMEDLIETNQAKDY 569 (725)
T ss_dssp ECCSCCCTTCSSSCCCHHHHH--HHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHHHTTSCHHHHHHT
T ss_pred EeccccCCCCccchhHHHHHH--hhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhhhccccccCCCCc
Confidence 3446887753 56 6788888654 3368999999999999985433 33333321 35
Q ss_pred EEEec-cCCCCHH----HHHHHHHHhc--CHHHHHHHHHHHHHH
Q psy14941 403 GKLLP-YLEITEE----TVSDALKIVL--SPEYKENAEDLGTRF 439 (513)
Q Consensus 403 G~~l~-~~~~~~~----~l~~ai~~ll--~~~y~~~a~~~~~~~ 439 (513)
|+.+. ....+.+ .|.+++..+. ++.-++++++-+...
T Consensus 570 G~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~ 613 (725)
T 3nb0_A 570 GIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEAL 613 (725)
T ss_dssp TEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHG
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 66553 2333444 4555555554 454444554444333
No 58
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=86.57 E-value=3.8 Score=39.18 Aligned_cols=43 Identities=12% Similarity=0.156 Sum_probs=36.6
Q ss_pred ccCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecC
Q psy14941 24 QQCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPE 66 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~ 66 (513)
-...+|+++..-+|-|=......+|..|+++|++|.++..++.
T Consensus 23 ~~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 23 KDGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred cCCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3456777677778899999999999999999999999998763
No 59
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=84.31 E-value=0.41 Score=47.25 Aligned_cols=42 Identities=5% Similarity=0.047 Sum_probs=33.8
Q ss_pred ccCceEeEEcCCCCC----ChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 24 QQCSKILAIFPTPAK----SHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~----gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
....||+++.+.... |=......+|++|+++||+|+++++..
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 467899988887654 333568899999999999999999753
No 60
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=83.25 E-value=2.9 Score=39.70 Aligned_cols=42 Identities=5% Similarity=0.074 Sum_probs=36.8
Q ss_pred cCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecC
Q psy14941 25 QCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPE 66 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~ 66 (513)
...+|+++..-+|-|=......+|..|+++|++|.++..++.
T Consensus 14 ~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~ 55 (334)
T 3iqw_A 14 RSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPA 55 (334)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSS
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 456888788888999999999999999999999999998753
No 61
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=80.84 E-value=3.3 Score=39.53 Aligned_cols=42 Identities=14% Similarity=0.158 Sum_probs=37.1
Q ss_pred ccCceEeEEcCCCCCChHHHHHHHHHHHH--hCCCcEEEEEeec
Q psy14941 24 QQCSKILAIFPTPAKSHQIIFDTILVELY--QRGHDLTVITQYP 65 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~gH~~~~~~la~~L~--~rGH~Vt~~~~~~ 65 (513)
....+|+++..-+|-|=......+|..|+ ++|++|.++..++
T Consensus 15 ~~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~ 58 (348)
T 3io3_A 15 HDSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDP 58 (348)
T ss_dssp CTTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CCCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 34568998888889999999999999999 9999999999875
No 62
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=80.68 E-value=18 Score=36.12 Aligned_cols=90 Identities=10% Similarity=0.057 Sum_probs=58.5
Q ss_pred EE-EecCCCcccccc-CCCceEEeccC---Cc-ccHHHHHHcCc-----ceEeecccc--CcHHHHHHHHHcCcEEEecc
Q psy14941 342 IR-TSSWMPQRDIFA-HPNMKLFISHG---GL-LGITEAVYEGI-----PVLGIPVFG--DQWANIKKLESLKAGKLLPY 408 (513)
Q Consensus 342 v~-~~~~~pq~~lL~-h~~~~~~Ithg---G~-~s~~Eal~~Gv-----P~i~~P~~~--DQ~~na~~~~~~G~G~~l~~ 408 (513)
|+ +.+.+|+.++.+ ...+|+|+.-. |+ .+..||+++|+ |+|+....+ ++- .-|+.+++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l---------~~g~lv~p 403 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---------TSALIVNP 403 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC---------TTSEEECT
T ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh---------CCeEEECC
Confidence 45 467888775322 26778887633 44 47899999998 777765433 222 14677764
Q ss_pred CCCCHHHHHHHHHHhc-C-HH-HHHHHHHHHHHHhcC
Q psy14941 409 LEITEETVSDALKIVL-S-PE-YKENAEDLGTRFRDR 442 (513)
Q Consensus 409 ~~~~~~~l~~ai~~ll-~-~~-y~~~a~~~~~~~~~~ 442 (513)
-+.+++.++|.+++ + +. -++..++..+..+..
T Consensus 404 --~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~ 438 (482)
T 1uqt_A 404 --YDRDEVAAALDRALTMSLAERISRHAEMLDVIVKN 438 (482)
T ss_dssp --TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC
Confidence 47899999999999 5 43 445555555555543
No 63
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=79.19 E-value=28 Score=29.35 Aligned_cols=147 Identities=14% Similarity=0.033 Sum_probs=75.3
Q ss_pred CceEEeCcccccCC---CCCcHHHHHHhhcCCCceEEEEeCc-ccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCC--CC
Q psy14941 260 ANVVEIGGIHVKPA---KKLNEEMERFLNESHNGVIYFSMGS-MLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDN--DT 333 (513)
Q Consensus 260 p~~~~vG~l~~~~~---~~l~~~l~~~l~~~~~~~v~vs~Gs-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~ 333 (513)
+.+-.+|.-..... ...-.++-+++.+ ++..+||-|. .. ......++..+.+-.++=+++.. +.
T Consensus 14 ~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~--~g~~lVsGGg~~G--------im~aa~~gAl~~gG~tigVlP~~~~~~ 83 (176)
T 2iz6_A 14 PIIGVMGPGKADTAENQLVMANELGKQIAT--HGWILLTGGRSLG--------VMHEAMKGAKEAGGTTIGVLPGPDTSE 83 (176)
T ss_dssp CEEEEECCCGGGCCHHHHHHHHHHHHHHHH--TTCEEEEECSSSS--------HHHHHHHHHHHTTCCEEEEECC-----
T ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEECCCccC--------HhHHHHHHHHHcCCEEEEEeCchhhhh
Confidence 45555665442111 1233455556664 5777888776 33 34555555555555555555532 22
Q ss_pred CCCCCCCcEEEecCCCcc-ccccCCCceEEeccCCcccH---HHHHHcCcceEeeccccCcHHHHHHHHHc--CcEEEec
Q psy14941 334 SIFKPYKNIRTSSWMPQR-DIFAHPNMKLFISHGGLLGI---TEAVYEGIPVLGIPVFGDQWANIKKLESL--KAGKLLP 407 (513)
Q Consensus 334 ~~~~~~~nv~~~~~~pq~-~lL~h~~~~~~IthgG~~s~---~Eal~~GvP~i~~P~~~DQ~~na~~~~~~--G~G~~l~ 407 (513)
.+.. -+...+++.+++. .++..-.-..++--||.||+ .|++.+++|++.+|.+. .....+... ..=...+
T Consensus 84 ~~~~-~~~~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~~~ 159 (176)
T 2iz6_A 84 ISDA-VDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHVAA 159 (176)
T ss_dssp CCTT-CSEEEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEEES
T ss_pred hccC-CceeEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEEcC
Confidence 1101 2335566667754 44432222344556777775 45577999999999832 111122222 2222222
Q ss_pred cCCCCHHHHHHHHHHhc
Q psy14941 408 YLEITEETVSDALKIVL 424 (513)
Q Consensus 408 ~~~~~~~~l~~ai~~ll 424 (513)
|.+++.+.+.+.+
T Consensus 160 ----~~~e~~~~l~~~~ 172 (176)
T 2iz6_A 160 ----DVAGAIAAVKQLL 172 (176)
T ss_dssp ----SHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHH
Confidence 6777777666554
No 64
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=76.10 E-value=18 Score=32.59 Aligned_cols=25 Identities=12% Similarity=0.085 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeecCC
Q psy14941 42 IIFDTILVELYQRGHDLTVITQYPET 67 (513)
Q Consensus 42 ~~~~~la~~L~~rGH~Vt~~~~~~~~ 67 (513)
--+..|+++|.+.| +|+++.|...+
T Consensus 15 pGi~~L~~~l~~~g-~V~VvAP~~~~ 39 (251)
T 2wqk_A 15 PGINALREALKSLG-RVVVVAPDRNL 39 (251)
T ss_dssp HHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred HHHHHHHHHHHhCC-CEEEEeeCCCC
Confidence 44678999999998 59988886543
No 65
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=76.02 E-value=2.4 Score=39.91 Aligned_cols=126 Identities=9% Similarity=0.110 Sum_probs=75.3
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCC-C------CCCCCCCCcEEEecCC--Cc-cccccCC
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDN-D------TSIFKPYKNIRTSSWM--PQ-RDIFAHP 357 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~------~~~~~~~~nv~~~~~~--pq-~~lL~h~ 357 (513)
+++.|.+..|+.......+.+.+.++++.+.+.+.++++..++. + ..+ . .+++.+.+-. .+ ..++ .
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~-~-~~~~~l~g~~sl~el~ali--~ 252 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAE-G-FAYVEVLPKMSLEGVARVL--A 252 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHT-T-CTTEEECCCCCHHHHHHHH--H
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHh-h-CCcccccCCCCHHHHHHHH--H
Confidence 46788888888765567788888888888766566766653431 1 111 1 2344444322 22 3667 7
Q ss_pred CceEEeccCCcccHHHHHHcCcceEee--ccccCcHHHHHHHHHcCc-EEEe-----ccCCCCHHHHHHHHHHhc
Q psy14941 358 NMKLFISHGGLLGITEAVYEGIPVLGI--PVFGDQWANIKKLESLKA-GKLL-----PYLEITEETVSDALKIVL 424 (513)
Q Consensus 358 ~~~~~IthgG~~s~~Eal~~GvP~i~~--P~~~DQ~~na~~~~~~G~-G~~l-----~~~~~~~~~l~~ai~~ll 424 (513)
+++++|+.-....-+ |.+.|+|++++ |.. + .+---.|- ...+ ..++++.+++.+++.+++
T Consensus 253 ~a~l~I~~DSG~~Hl-Aaa~g~P~v~lfg~t~---p---~~~~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l 320 (326)
T 2gt1_A 253 GAKFVVSVDTGLSHL-TAALDRPNITVYGPTD---P---GLIGGYGKNQMVCRAPGNELSQLTANAVKQFIEENA 320 (326)
T ss_dssp TCSEEEEESSHHHHH-HHHTTCCEEEEESSSC---H---HHHCCCSSSEEEEECGGGCGGGCCHHHHHHHHHHTT
T ss_pred hCCEEEecCCcHHHH-HHHcCCCEEEEECCCC---h---hhcCCCCCCceEecCCcccccCCCHHHHHHHHHHHH
Confidence 899999994323333 66699999998 321 1 11000111 1111 134789999999999988
No 66
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=68.98 E-value=42 Score=28.80 Aligned_cols=97 Identities=14% Similarity=0.131 Sum_probs=54.4
Q ss_pred HHHHHHhhcCCCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCcEEEe--cCCCc-cccc
Q psy14941 278 EEMERFLNESHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDNDTSIFKPYKNIRTS--SWMPQ-RDIF 354 (513)
Q Consensus 278 ~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~nv~~~--~~~pq-~~lL 354 (513)
.++-+++.+ ++..+|+ |.. ........++..+.+-+++=++..++..+ . .....+. ..+++ +.++
T Consensus 48 ~~lg~~LA~--~G~~vVs-Gg~-------~GiM~aa~~gAl~~GG~~iGVlP~e~~~~-~-~~~~~~~~~~~f~~Rk~~m 115 (195)
T 1rcu_A 48 LELGRTLAK--KGYLVFN-GGR-------DGVMELVSQGVREAGGTVVGILPDEEAGN-P-YLSVAVKTGLDFQMRSFVL 115 (195)
T ss_dssp HHHHHHHHH--TTCEEEE-CCS-------SHHHHHHHHHHHHTTCCEEEEESTTCCCC-T-TCSEEEECCCCHHHHHHHH
T ss_pred HHHHHHHHH--CCCEEEe-CCH-------HHHHHHHHHHHHHcCCcEEEEeCCcccCC-C-CcceeeecCCCHHHHHHHH
Confidence 445556664 5677777 422 24556666665555555555555532222 2 2333333 34553 3444
Q ss_pred cCCCceEEeccCCcccHH---HHHHcCcceEeecc
Q psy14941 355 AHPNMKLFISHGGLLGIT---EAVYEGIPVLGIPV 386 (513)
Q Consensus 355 ~h~~~~~~IthgG~~s~~---Eal~~GvP~i~~P~ 386 (513)
..-.-..++.-||.||+. |++.+|+|+++++.
T Consensus 116 ~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 116 LRNADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 333334556678888764 56789999999974
No 67
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=68.53 E-value=14 Score=32.52 Aligned_cols=150 Identities=7% Similarity=0.003 Sum_probs=78.5
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCC--CCCCCCCCcEEEecCCCccccccCCCceEEecc
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDND--TSIFKPYKNIRTSSWMPQRDIFAHPNMKLFISH 365 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~Ith 365 (513)
++++++|..|.++ ..-+..+.+.+..+.+...... +....+..++.+...--+.+.| ..++++|.-
T Consensus 31 gk~VLVVGgG~va----------~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL--~~adLVIaA 98 (223)
T 3dfz_A 31 GRSVLVVGGGTIA----------TRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDL--LNVFFIVVA 98 (223)
T ss_dssp TCCEEEECCSHHH----------HHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGS--SSCSEEEEC
T ss_pred CCEEEEECCCHHH----------HHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHh--CCCCEEEEC
Confidence 5666666655543 3344445555665555433211 0000001233333322233445 568899988
Q ss_pred CCcccHHHHHH----cCcceEeeccccCcHHHHHH-----HHHcCcEEEeccCC---CCHHHHHHHHHHhc-C--HHHHH
Q psy14941 366 GGLLGITEAVY----EGIPVLGIPVFGDQWANIKK-----LESLKAGKLLPYLE---ITEETVSDALKIVL-S--PEYKE 430 (513)
Q Consensus 366 gG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~-----~~~~G~G~~l~~~~---~~~~~l~~ai~~ll-~--~~y~~ 430 (513)
-|.-.+.+.++ .|+|+-+. |.+..+.. +.+-++-+.+..+. .-+..|++.|.+.+ . ..+.+
T Consensus 99 T~d~~~N~~I~~~ak~gi~VNvv----D~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~~lp~~~~~~~~ 174 (223)
T 3dfz_A 99 TNDQAVNKFVKQHIKNDQLVNMA----SSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSSNYDESYTQYTQ 174 (223)
T ss_dssp CCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCTHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCEEEEe----CCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHHHccHHHHHHHH
Confidence 88755544443 45564332 44444432 22234444454433 33467888888888 4 57888
Q ss_pred HHHHHHHHHhcCCCChHHHHHHH
Q psy14941 431 NAEDLGTRFRDRPQSPLEVAIYW 453 (513)
Q Consensus 431 ~a~~~~~~~~~~~~~~~~~a~~~ 453 (513)
.+.++.+.++..--++.++-..|
T Consensus 175 ~~~~~R~~vk~~~~~~~~Rr~~~ 197 (223)
T 3dfz_A 175 FLYECRVLIHRLNVSKSRKHELL 197 (223)
T ss_dssp HHHHHHHHHHHCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHH
Confidence 89999999987655666665444
No 68
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=66.31 E-value=7.3 Score=35.79 Aligned_cols=41 Identities=24% Similarity=0.267 Sum_probs=29.3
Q ss_pred hccCceEeEEcCCCCCChHHH--HHHHHHHHHhCCCcEEEEEe
Q psy14941 23 IQQCSKILAIFPTPAKSHQII--FDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 23 ~~~~~kIL~~~p~~~~gH~~~--~~~la~~L~~rGH~Vt~~~~ 63 (513)
...+.|||+++.+|-....+- ....+++|.++||+|+++--
T Consensus 19 ~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 19 YFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp ---CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred hhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 457789999999986543332 45677888999999998754
No 69
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=66.25 E-value=3 Score=38.34 Aligned_cols=52 Identities=19% Similarity=0.188 Sum_probs=38.7
Q ss_pred CCceEEeccCCcccHHHHHHc------CcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc
Q psy14941 357 PNMKLFISHGGLLGITEAVYE------GIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL 424 (513)
Q Consensus 357 ~~~~~~IthgG~~s~~Eal~~------GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll 424 (513)
..++++|+=||-||+.+++.. ++|++++|... .|. + .+++++++.++++.++
T Consensus 34 ~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~-------------lgf-l--~~~~~~~~~~~l~~l~ 91 (272)
T 2i2c_A 34 VEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTGH-------------LGF-Y--ADWRPAEADKLVKLLA 91 (272)
T ss_dssp SSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESSS-------------CCS-S--CCBCGGGHHHHHHHHH
T ss_pred CCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCC-------------CCc-C--CcCCHHHHHHHHHHHH
Confidence 457999999999999999775 89999998511 121 1 2445777888888887
No 70
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=62.01 E-value=15 Score=29.77 Aligned_cols=41 Identities=17% Similarity=0.179 Sum_probs=32.3
Q ss_pred cCceEeEEcCCC-CCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 25 QCSKILAIFPTP-AKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 25 ~~~kIL~~~p~~-~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
+..|+|++..=| ......-.+-++..|.++||+|++.+++.
T Consensus 5 ~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npA 46 (157)
T 1kjn_A 5 STGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPA 46 (157)
T ss_dssp -CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred cceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHH
Confidence 346777665555 46788888999999999999999999864
No 71
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=58.11 E-value=16 Score=28.97 Aligned_cols=38 Identities=11% Similarity=0.022 Sum_probs=28.4
Q ss_pred eEeEEcCCCCC--ChHHHHHHHHHHHHhCCCcE-EEEEeec
Q psy14941 28 KILAIFPTPAK--SHQIIFDTILVELYQRGHDL-TVITQYP 65 (513)
Q Consensus 28 kIL~~~p~~~~--gH~~~~~~la~~L~~rGH~V-t~~~~~~ 65 (513)
|+++++..+.+ ......+.+|.++.+.||+| .++-...
T Consensus 2 k~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~d 42 (130)
T 2hy5_A 2 KFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHD 42 (130)
T ss_dssp EEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEech
Confidence 55556665544 56678899999999999999 8776643
No 72
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=56.61 E-value=14 Score=29.58 Aligned_cols=40 Identities=8% Similarity=-0.091 Sum_probs=32.6
Q ss_pred CceEeEEcCCC--CCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 26 CSKILAIFPTP--AKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 26 ~~kIL~~~p~~--~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
..|+++++..+ +.........+|...++.||+|+++-...
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~d 56 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIX 56 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeC
Confidence 46888777777 56778888999999999999999887744
No 73
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=56.56 E-value=14 Score=28.31 Aligned_cols=38 Identities=13% Similarity=0.139 Sum_probs=29.2
Q ss_pred eEeEEcCCC--CCChHHHHHHHHHHHHhC-CC-cEEEEEeec
Q psy14941 28 KILAIFPTP--AKSHQIIFDTILVELYQR-GH-DLTVITQYP 65 (513)
Q Consensus 28 kIL~~~p~~--~~gH~~~~~~la~~L~~r-GH-~Vt~~~~~~ 65 (513)
|+++++..+ +.......+.+|..+++. || +|+++-..+
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~d 44 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSD 44 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEch
Confidence 566666665 446677789999999999 99 999887654
No 74
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=56.29 E-value=58 Score=32.51 Aligned_cols=94 Identities=16% Similarity=0.064 Sum_probs=63.4
Q ss_pred cEEEecCCCcccccc-CCCceEEecc---CCccc-HHHHHHcC---cceEeeccccCcHHHHHHHHHcCcEEEeccCCCC
Q psy14941 341 NIRTSSWMPQRDIFA-HPNMKLFISH---GGLLG-ITEAVYEG---IPVLGIPVFGDQWANIKKLESLKAGKLLPYLEIT 412 (513)
Q Consensus 341 nv~~~~~~pq~~lL~-h~~~~~~Ith---gG~~s-~~Eal~~G---vP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~ 412 (513)
.|++...+|+.++.+ ...+++|+.- =|+|. ..||+++| .|+|+--+.| .+..+. .-|+.+++ -+
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~--~~allVnP--~D 424 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG--EYCRSVNP--FD 424 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG--GGSEEECT--TB
T ss_pred CEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC--CCEEEECC--CC
Confidence 578888888754332 1556777753 47764 59999996 6666654443 222221 24788874 47
Q ss_pred HHHHHHHHHHhc-C--HHHHHHHHHHHHHHhcC
Q psy14941 413 EETVSDALKIVL-S--PEYKENAEDLGTRFRDR 442 (513)
Q Consensus 413 ~~~l~~ai~~ll-~--~~y~~~a~~~~~~~~~~ 442 (513)
.+++.++|.++| + .+-+++.+++.+.+...
T Consensus 425 ~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~~ 457 (496)
T 3t5t_A 425 LVEQAEAISAALAAGPRQRAEAAARRRDAARPW 457 (496)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC
Confidence 899999999998 4 46777778888887665
No 75
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=55.63 E-value=5.6 Score=36.14 Aligned_cols=52 Identities=23% Similarity=0.328 Sum_probs=40.0
Q ss_pred CCceEEeccCCcccHHHHHHc---CcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc
Q psy14941 357 PNMKLFISHGGLLGITEAVYE---GIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL 424 (513)
Q Consensus 357 ~~~~~~IthgG~~s~~Eal~~---GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll 424 (513)
..++++|+-||-||+.+++.. ++|+++++. +- +|... ++.++++.++++.++
T Consensus 40 ~~~D~vv~~GGDGTll~~a~~~~~~~PilGIn~-G~------------~Gfl~---~~~~~~~~~al~~i~ 94 (258)
T 1yt5_A 40 VTADLIVVVGGDGTVLKAAKKAADGTPMVGFKA-GR------------LGFLT---SYTLDEIDRFLEDLR 94 (258)
T ss_dssp BCCSEEEEEECHHHHHHHHTTBCTTCEEEEEES-SS------------CCSSC---CBCGGGHHHHHHHHH
T ss_pred CCCCEEEEEeCcHHHHHHHHHhCCCCCEEEEEC-CC------------CCccC---cCCHHHHHHHHHHHH
Confidence 467999999999999999876 899999973 21 12222 346788888998888
No 76
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=54.01 E-value=9.6 Score=26.49 Aligned_cols=37 Identities=16% Similarity=0.318 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcccccccc
Q psy14941 475 WYQYYLLDIALVLIVGLVSVCFVLKYL-CGSLVRRKHK 511 (513)
Q Consensus 475 ~~~~~~lDv~~~~~~~~~~~~~~~~~~-~~~~~~~~~k 511 (513)
+|.|..|=+-.++++.++.++-|...+ .|+.|++++|
T Consensus 13 ~YDY~tLRigGLifA~vLfi~GI~iilS~kcrCk~~qk 50 (74)
T 2zxe_G 13 TYDYYRLRVVGLIVAAVLCVIGIIILLAGKCRCKFNQN 50 (74)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHTTTC--------
T ss_pred ccchHHheeccchhHHHHHHHHHHHHHcCccccCCCCC
Confidence 467888888877776655444443333 4555555444
No 77
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=53.22 E-value=11 Score=25.86 Aligned_cols=20 Identities=30% Similarity=0.557 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy14941 475 WYQYYLLDIALVLIVGLVSV 494 (513)
Q Consensus 475 ~~~~~~lDv~~~~~~~~~~~ 494 (513)
+|.|..|-+-.++++.++.+
T Consensus 10 ~YDY~tLRiGGLifA~vLfi 29 (72)
T 2jo1_A 10 TYDYQSLQIGGLVIAGILFI 29 (72)
T ss_dssp GCSTHHHHHHHHHHHHHHHH
T ss_pred ccchHHhhccchHHHHHHHH
Confidence 46677887776666554433
No 78
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=51.56 E-value=17 Score=32.16 Aligned_cols=40 Identities=20% Similarity=0.321 Sum_probs=28.5
Q ss_pred CceEeEEcCCCCCCh--HHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 26 CSKILAIFPTPAKSH--QIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 26 ~~kIL~~~p~~~~gH--~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
+.|||++..++-.+- ..-...+++.|.++||+|.++--..
T Consensus 1 ~mkiLiI~gspr~~S~t~~l~~~~~~~l~~~g~ev~~~dL~~ 42 (228)
T 3tem_A 1 GKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYA 42 (228)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHHTCEEEEEETTT
T ss_pred CCEEEEEEeCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEhhh
Confidence 468999999886542 2334556777778899999886543
No 79
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=49.92 E-value=18 Score=24.65 Aligned_cols=23 Identities=17% Similarity=0.468 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy14941 475 WYQYYLLDIALVLIVGLVSVCFV 497 (513)
Q Consensus 475 ~~~~~~lDv~~~~~~~~~~~~~~ 497 (513)
+|.|..|=+-.++++.++.++-+
T Consensus 11 ~YDY~tLRigGLifA~vLfi~GI 33 (67)
T 2jp3_A 11 YYDWESLQLGGLIFGGLLCIAGI 33 (67)
T ss_dssp GGGGHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHheecchhhHHHHHHHHH
Confidence 57788888887666655544333
No 80
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=48.90 E-value=12 Score=39.62 Aligned_cols=112 Identities=13% Similarity=0.042 Sum_probs=74.7
Q ss_pred CCcEE-EecCCCccccccCCCceEEeccCCcccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccC-------C
Q psy14941 339 YKNIR-TSSWMPQRDIFAHPNMKLFISHGGLLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYL-------E 410 (513)
Q Consensus 339 ~~nv~-~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~-------~ 410 (513)
.+.+. +.++.+-.++| ..+|++||=-. ..+.|.+..++|+|....-.|+..+ +.+|. ..+.. -
T Consensus 597 ~~~~~~~~~~~di~~ll--~~aD~lITDyS-Sv~fD~~~l~kPiif~~~D~~~Y~~----~~rg~--y~d~~~~~pg~~~ 667 (729)
T 3l7i_A 597 ENFAIDVSNYNDVSELF--LISDCLITDYS-SVMFDYGILKRPQFFFAYDIDKYDK----GLRGF--YMNYMEDLPGPIY 667 (729)
T ss_dssp TTTEEECTTCSCHHHHH--HTCSEEEESSC-THHHHHGGGCCCEEEECTTTTTTTS----SCCSB--SSCTTSSSSSCEE
T ss_pred CCcEEeCCCCcCHHHHH--HHhCEEEeech-HHHHhHHhhCCCEEEecCCHHHHhh----ccCCc--ccChhHhCCCCeE
Confidence 33443 34455556888 78999999754 6679999999999998665555432 11222 22211 1
Q ss_pred CCHHHHHHHHHHhc--CHHHHHHHHHHHHHHhcC-CCChHHHHHHHHHHHHH
Q psy14941 411 ITEETVSDALKIVL--SPEYKENAEDLGTRFRDR-PQSPLEVAIYWIEYVIK 459 (513)
Q Consensus 411 ~~~~~l~~ai~~ll--~~~y~~~a~~~~~~~~~~-~~~~~~~a~~~ie~~~~ 459 (513)
-|.++|.++|.+.. +..|+++.+++.+.+-.. .-.+.+++++.|-....
T Consensus 668 ~~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 668 TEPYGLAKELKNLDKVQQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp SSHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhhhhccchhHHHHHHHHHHHhCCccCChHHHHHHHHHHhcCc
Confidence 37899999999888 578899888888887532 22577777776655443
No 81
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=48.24 E-value=12 Score=32.36 Aligned_cols=42 Identities=7% Similarity=-0.071 Sum_probs=31.9
Q ss_pred cCceEeEEcCCCCCChHH-HHHHHHHHHHhCCCcEEEEEeecCCc
Q psy14941 25 QCSKILAIFPTPAKSHQI-IFDTILVELYQRGHDLTVITQYPETL 68 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~-~~~~la~~L~~rGH~Vt~~~~~~~~~ 68 (513)
++.||++.++ |.+... -...+.++|.++|++|.++.+.....
T Consensus 6 ~~k~I~lgiT--Gs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~ 48 (201)
T 3lqk_A 6 AGKHVGFGLT--GSHCTYHEVLPQMERLVELGAKVTPFVTHTVQT 48 (201)
T ss_dssp TTCEEEEECC--SCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCC
T ss_pred CCCEEEEEEE--ChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHH
Confidence 4568884443 336667 79999999999999999998865443
No 82
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=47.31 E-value=24 Score=27.45 Aligned_cols=38 Identities=18% Similarity=0.076 Sum_probs=29.3
Q ss_pred eEeEEcCCCCCChH--HHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 28 KILAIFPTPAKSHQ--IIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 28 kIL~~~p~~~~gH~--~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
|+++++..+.+|+. .-.+.+|.++...||+|.++-..+
T Consensus 3 k~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~D 42 (119)
T 2d1p_B 3 RIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIAD 42 (119)
T ss_dssp CEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehH
Confidence 57777777666655 667889999999999998877643
No 83
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=46.35 E-value=32 Score=27.67 Aligned_cols=39 Identities=18% Similarity=0.191 Sum_probs=29.3
Q ss_pred CceEeEEcCCCCCC--hHHHHHHHHHHHHhCCCcE-EEEEee
Q psy14941 26 CSKILAIFPTPAKS--HQIIFDTILVELYQRGHDL-TVITQY 64 (513)
Q Consensus 26 ~~kIL~~~p~~~~g--H~~~~~~la~~L~~rGH~V-t~~~~~ 64 (513)
+.|+++++..+.+| ...-.+.+|+++.+.||+| .++-..
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 56788777777665 4455678899999999999 776653
No 84
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=45.53 E-value=20 Score=33.46 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=23.6
Q ss_pred CceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecC
Q psy14941 26 CSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPE 66 (513)
Q Consensus 26 ~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~ 66 (513)
..||+ |+..+. ......++|.++||+|..+.+.+.
T Consensus 2 ~mriv-f~Gtp~-----fa~~~L~~L~~~~~~v~~Vvt~pd 36 (314)
T 3tqq_A 2 SLKIV-FAGTPQ-----FAVPTLRALIDSSHRVLAVYTQPD 36 (314)
T ss_dssp CCEEE-EEECSG-----GGHHHHHHHHHSSSEEEEEECCCC
T ss_pred CcEEE-EECCCH-----HHHHHHHHHHHCCCeEEEEEeCCC
Confidence 45887 655553 234567888899999987766443
No 85
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=45.06 E-value=20 Score=30.94 Aligned_cols=40 Identities=28% Similarity=0.316 Sum_probs=24.7
Q ss_pred cCceEeEEcCCCCCChH--HHHHHHHHH----HHhCCCcEEEEEee
Q psy14941 25 QCSKILAIFPTPAKSHQ--IIFDTILVE----LYQRGHDLTVITQY 64 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~--~~~~~la~~----L~~rGH~Vt~~~~~ 64 (513)
.++|||++..+|-.++- .....|+++ +.++||+|+++...
T Consensus 11 ~~~~iLii~gsP~~~~s~~s~~~~l~~~~~~~~~~~g~~v~~~dL~ 56 (204)
T 2amj_A 11 GSSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRAD 56 (204)
T ss_dssp -CCEEEEEECCC------CHHHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcCEEEEEcCCCcccCcCcHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 46899999999875554 455555544 44569999988753
No 86
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=44.26 E-value=23 Score=32.43 Aligned_cols=32 Identities=19% Similarity=0.323 Sum_probs=23.4
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEe
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~ 63 (513)
.||| +. ++.|.+ -..|+++|.++||+|+.++-
T Consensus 1 MkIL-VT--GatGfI--G~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVL-VG--GGTGFI--GTALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEE-EE--TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEE-EE--CCCCHH--HHHHHHHHHHCCCEEEEEEC
Confidence 3777 43 344544 45689999999999998874
No 87
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=44.22 E-value=15 Score=31.47 Aligned_cols=38 Identities=24% Similarity=0.273 Sum_probs=29.6
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEee
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
.|||++..+|-.+.-.....+++++.+.|++|+++--.
T Consensus 2 mkiLiI~gsp~~~~s~l~~~l~~~~~~~g~ev~~~dL~ 39 (192)
T 3f2v_A 2 PKTLIILAHPNISQSTVHKHWSDAVRQHTDRFTVHELY 39 (192)
T ss_dssp CCEEEEECCTTGGGCSHHHHHHHHHTTCTTTEEEEEHH
T ss_pred CEEEEEEeCCCccHHHHHHHHHHHHHhCCCeEEEEEch
Confidence 48998888886544357788889998899999987653
No 88
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=42.84 E-value=25 Score=31.42 Aligned_cols=39 Identities=10% Similarity=0.141 Sum_probs=29.1
Q ss_pred CceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEee
Q psy14941 26 CSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 26 ~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
+.|||++.|..+.+-...+...++.++.-|-+|++++.+
T Consensus 1 ~mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 1 SVRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 358999999877666667777888877667777776653
No 89
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=42.50 E-value=27 Score=31.46 Aligned_cols=39 Identities=10% Similarity=0.102 Sum_probs=34.4
Q ss_pred cCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEee
Q psy14941 25 QCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
...+|| +.+.++-.|-....-++..|..+|++|.++...
T Consensus 122 ~~~~vl-la~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 122 TKGTVV-CHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CSCEEE-EEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCeEE-EEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 457888 667788999999999999999999999999874
No 90
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=41.87 E-value=43 Score=31.16 Aligned_cols=43 Identities=12% Similarity=0.148 Sum_probs=37.1
Q ss_pred ccCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecC
Q psy14941 24 QQCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPE 66 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~ 66 (513)
.+++||.++..-+|-|=......||.+|+++|++|.++-.++.
T Consensus 45 i~~aKVIAIaGKGGVGKTTtavNLA~aLA~~GkkVllID~Dpq 87 (314)
T 3fwy_A 45 ITGAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDPK 87 (314)
T ss_dssp --CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESSS
T ss_pred CCCceEEEEECCCccCHHHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 4678999998878889999999999999999999999987753
No 91
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=41.42 E-value=1.5e+02 Score=24.53 Aligned_cols=140 Identities=11% Similarity=0.082 Sum_probs=76.0
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCC-CCCCCCCCcEEEecCCCccccccCCCceEEeccC
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDND-TSIFKPYKNIRTSSWMPQRDIFAHPNMKLFISHG 366 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~Ithg 366 (513)
.++.|-|-+||.. .....+.....++.++..+-..+-+.. .++ .+ ..++.. .....+++||.=.
T Consensus 5 ~~~~V~IimgS~S-----D~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~-----~~--~~~~~~---a~~~g~~ViIa~A 69 (169)
T 3trh_A 5 NKIFVAILMGSDS-----DLSTMETAFTELKSLGIPFEAHILSAHRTPK-----ET--VEFVEN---ADNRGCAVFIAAA 69 (169)
T ss_dssp -CCEEEEEESCGG-----GHHHHHHHHHHHHHTTCCEEEEECCTTTSHH-----HH--HHHHHH---HHHTTEEEEEEEE
T ss_pred CCCcEEEEECcHH-----hHHHHHHHHHHHHHcCCCEEEEEEcccCCHH-----HH--HHHHHH---HHhCCCcEEEEEC
Confidence 4577888889886 567788888888888775444333321 111 10 001000 1124578999888
Q ss_pred CcccHHHHH---HcCcceEeeccccC---cHHHHHHHHH--cCcEEE-eccC---CCCHHHHHHHHHHhcCHHHHHHHHH
Q psy14941 367 GLLGITEAV---YEGIPVLGIPVFGD---QWANIKKLES--LKAGKL-LPYL---EITEETVSDALKIVLSPEYKENAED 434 (513)
Q Consensus 367 G~~s~~Eal---~~GvP~i~~P~~~D---Q~~na~~~~~--~G~G~~-l~~~---~~~~~~l~~ai~~ll~~~y~~~a~~ 434 (513)
|...-+-.+ ..-+|+|++|.... -.+--.-+.+ .|+.+. +..+ ..+..-+...|..+-|+..+++.+.
T Consensus 70 G~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~~d~~l~~kl~~ 149 (169)
T 3trh_A 70 GLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIALQDKSIAQKLVQ 149 (169)
T ss_dssp CSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHcCCCHHHHHHHHH
Confidence 864333322 34689999998532 1222223333 565422 2221 1233333333333338899999888
Q ss_pred HHHHHhcC
Q psy14941 435 LGTRFRDR 442 (513)
Q Consensus 435 ~~~~~~~~ 442 (513)
.++..++.
T Consensus 150 ~r~~~~~~ 157 (169)
T 3trh_A 150 QRTAKRET 157 (169)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88777643
No 92
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=41.31 E-value=1.5e+02 Score=24.60 Aligned_cols=139 Identities=14% Similarity=0.101 Sum_probs=76.0
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCC-CCCCCCCCCcEEEecCCCccccccCCCceEEeccC
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDN-DTSIFKPYKNIRTSSWMPQRDIFAHPNMKLFISHG 366 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~Ithg 366 (513)
.++.|-|-+||.. .....+.....++.++..+-..+-+. ..++ .+ ..++-. .....++++|.=.
T Consensus 6 ~~~~V~IimgS~S-----D~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~-----~~--~~~~~~---a~~~g~~ViIa~A 70 (174)
T 3lp6_A 6 ERPRVGVIMGSDS-----DWPVMADAAAALAEFDIPAEVRVVSAHRTPE-----AM--FSYARG---AAARGLEVIIAGA 70 (174)
T ss_dssp CCCSEEEEESCGG-----GHHHHHHHHHHHHHTTCCEEEEECCTTTCHH-----HH--HHHHHH---HHHHTCCEEEEEE
T ss_pred CCCeEEEEECcHH-----hHHHHHHHHHHHHHcCCCEEEEEECCCCCHH-----HH--HHHHHH---HHhCCCCEEEEec
Confidence 4567888888886 56778888888888876544433322 1111 10 001000 0114567888877
Q ss_pred Ccc----cHHHHHHcCcceEeeccccCc--HHH-HHHHHH--cCcEEE-ecc-CCCCHHHHHHHHHHhcCHHHHHHHHHH
Q psy14941 367 GLL----GITEAVYEGIPVLGIPVFGDQ--WAN-IKKLES--LKAGKL-LPY-LEITEETVSDALKIVLSPEYKENAEDL 435 (513)
Q Consensus 367 G~~----s~~Eal~~GvP~i~~P~~~DQ--~~n-a~~~~~--~G~G~~-l~~-~~~~~~~l~~ai~~ll~~~y~~~a~~~ 435 (513)
|.. ++.-+ ..-+|+|++|..... -.. -.-+.+ .|+++. +.. ...+..-+...|..+-|+..+++.++.
T Consensus 71 G~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~Il~~~d~~l~~kl~~~ 149 (174)
T 3lp6_A 71 GGAAHLPGMVAA-ATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAF 149 (174)
T ss_dssp ESSCCHHHHHHH-HCSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 753 33333 366999999985221 112 222333 454322 222 223444444444433389999999888
Q ss_pred HHHHhcC
Q psy14941 436 GTRFRDR 442 (513)
Q Consensus 436 ~~~~~~~ 442 (513)
++..++.
T Consensus 150 r~~~~~~ 156 (174)
T 3lp6_A 150 QDRLADV 156 (174)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877643
No 93
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=41.26 E-value=33 Score=29.80 Aligned_cols=39 Identities=15% Similarity=0.030 Sum_probs=29.1
Q ss_pred CceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecC
Q psy14941 26 CSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPE 66 (513)
Q Consensus 26 ~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~ 66 (513)
..||++.++ ++ +-..-...++++|.++|++|.++.+...
T Consensus 4 ~k~IllgvT-Ga-iaa~k~~~ll~~L~~~g~eV~vv~T~~A 42 (209)
T 3zqu_A 4 PERITLAMT-GA-SGAQYGLRLLDCLVQEEREVHFLISKAA 42 (209)
T ss_dssp CSEEEEEEC-SS-SCHHHHHHHHHHHHHTTCEEEEEECHHH
T ss_pred CCEEEEEEE-CH-HHHHHHHHHHHHHHHCCCEEEEEECccH
Confidence 467874444 34 4455589999999999999999988553
No 94
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=41.13 E-value=29 Score=27.71 Aligned_cols=38 Identities=11% Similarity=0.058 Sum_probs=32.3
Q ss_pred CceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEee
Q psy14941 26 CSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 26 ~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
..||+ +...++-.|-.-..-++..|..+|++|..+...
T Consensus 3 ~~~vv-la~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 3 KKTIV-LGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCEEE-EEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEE-EEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 45787 556677799999999999999999999988874
No 95
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=40.95 E-value=1.2e+02 Score=24.89 Aligned_cols=136 Identities=10% Similarity=0.045 Sum_probs=73.7
Q ss_pred ceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCC-CCCCCCCCcEEEecCCCccccccCC-CceEEeccCC
Q psy14941 290 GVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDND-TSIFKPYKNIRTSSWMPQRDIFAHP-NMKLFISHGG 367 (513)
Q Consensus 290 ~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~nv~~~~~~pq~~lL~h~-~~~~~IthgG 367 (513)
+.|-|-+||.. .....++....++.++..+-..+-+.. .++ .+ .++..+ ..+. .++++|.=.|
T Consensus 3 ~~V~Iimgs~S-----D~~v~~~a~~~l~~~gi~~ev~V~saHR~p~-----~~--~~~~~~---a~~~~~~~ViIa~AG 67 (159)
T 3rg8_A 3 PLVIILMGSSS-----DMGHAEKIASELKTFGIEYAIRIGSAHKTAE-----HV--VSMLKE---YEALDRPKLYITIAG 67 (159)
T ss_dssp CEEEEEESSGG-----GHHHHHHHHHHHHHTTCEEEEEECCTTTCHH-----HH--HHHHHH---HHTSCSCEEEEEECC
T ss_pred CeEEEEECcHH-----HHHHHHHHHHHHHHcCCCEEEEEEcccCCHH-----HH--HHHHHH---hhhcCCCcEEEEECC
Confidence 56777788876 567788888888888875544433321 111 10 011100 1122 4789999888
Q ss_pred cccHHHH---HHcCcceEeecccc---CcHHHHHHHHH--cCcEEEeccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q psy14941 368 LLGITEA---VYEGIPVLGIPVFG---DQWANIKKLES--LKAGKLLPYLEITEETVSDALKIVLSPEYKENAEDLGTRF 439 (513)
Q Consensus 368 ~~s~~Ea---l~~GvP~i~~P~~~---DQ~~na~~~~~--~G~G~~l~~~~~~~~~l~~ai~~ll~~~y~~~a~~~~~~~ 439 (513)
...-+-+ -..-+|+|++|... +-.+ -.-+.+ .|+.+.---...+..-+...|..+-|+..+++.+..++..
T Consensus 68 ~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~d-LlS~vqmp~GvpVatv~~~~nAa~lA~~Il~~~d~~l~~kl~~~r~~~ 146 (159)
T 3rg8_A 68 RSNALSGFVDGFVKGATIACPPPSDSFAGAD-IYSSLRMPSGISPALVLEPKNAALLAARIFSLYDKEIADSVKSYMESN 146 (159)
T ss_dssp SSCCHHHHHHHHSSSCEEECCCCCCGGGGTH-HHHHHCCCTTCCCEECCSHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHhccCCCEEEeeCCCCCCCCcc-HHHHHhCCCCCceEEecCchHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 6433222 23568999999643 2222 222333 3665432112223333443333333888888888887765
Q ss_pred hc
Q psy14941 440 RD 441 (513)
Q Consensus 440 ~~ 441 (513)
.+
T Consensus 147 ~~ 148 (159)
T 3rg8_A 147 AQ 148 (159)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 96
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=40.05 E-value=84 Score=27.94 Aligned_cols=40 Identities=20% Similarity=0.139 Sum_probs=25.6
Q ss_pred ccCceEeEEcCCCCCChHH-HHHHHHHHHHhCCCcEEEEEe
Q psy14941 24 QQCSKILAIFPTPAKSHQI-IFDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~gH~~-~~~~la~~L~~rGH~Vt~~~~ 63 (513)
..+.+|.+++|......+. ....+.+++.++|+++.+...
T Consensus 5 ~~s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~ 45 (276)
T 3jy6_A 5 QSSKLIAVIVANIDDYFSTELFKGISSILESRGYIGVLFDA 45 (276)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCcEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3456777777765433333 344566777888999887654
No 97
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=39.69 E-value=16 Score=30.86 Aligned_cols=39 Identities=15% Similarity=0.230 Sum_probs=29.9
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCC
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPET 67 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~ 67 (513)
.||++.++ |.+...-...+.+.|.++|++|.++.+....
T Consensus 6 k~IllgvT--Gs~aa~k~~~ll~~L~~~g~~V~vv~T~~A~ 44 (175)
T 3qjg_A 6 ENVLICLC--GSVNSINISHYIIELKSKFDEVNVIASTNGR 44 (175)
T ss_dssp CEEEEEEC--SSGGGGGHHHHHHHHTTTCSEEEEEECTGGG
T ss_pred CEEEEEEe--CHHHHHHHHHHHHHHHHCCCEEEEEECcCHH
Confidence 57874444 3366667899999999999999999886543
No 98
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=39.52 E-value=41 Score=31.40 Aligned_cols=35 Identities=23% Similarity=0.334 Sum_probs=23.9
Q ss_pred CceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecC
Q psy14941 26 CSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPE 66 (513)
Q Consensus 26 ~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~ 66 (513)
..||+ |+..+ .......++|.++||+|..+.+.+.
T Consensus 7 ~mriv-f~Gt~-----~fa~~~L~~L~~~~~~v~~Vvt~pd 41 (318)
T 3q0i_A 7 SLRIV-FAGTP-----DFAARHLAALLSSEHEIIAVYTQPE 41 (318)
T ss_dssp CCEEE-EECCS-----HHHHHHHHHHHTSSSEEEEEECCCC
T ss_pred CCEEE-EEecC-----HHHHHHHHHHHHCCCcEEEEEcCCC
Confidence 46888 55543 3445667888899999887666443
No 99
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=38.73 E-value=26 Score=26.99 Aligned_cols=63 Identities=21% Similarity=0.286 Sum_probs=45.0
Q ss_pred CCceEEeccCCccc---------HHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc
Q psy14941 357 PNMKLFISHGGLLG---------ITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL 424 (513)
Q Consensus 357 ~~~~~~IthgG~~s---------~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll 424 (513)
..++++|.-.|..| +..|...|+|++++=..+.+. --..+++.+..++ .-+.+.|.++|+..+
T Consensus 37 ~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~a~~iV----~Wn~~~I~~aI~~~~ 108 (111)
T 1eiw_A 37 EDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAVSSEVV----GWNPHCIRDALEDAL 108 (111)
T ss_dssp SSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHHCSEEE----CSCHHHHHHHHHHHH
T ss_pred ccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhhCceec----cCCHHHHHHHHHhcc
Confidence 67788888889887 677888999999985555441 1223555555554 347899999998765
No 100
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=38.07 E-value=14 Score=34.09 Aligned_cols=30 Identities=27% Similarity=0.284 Sum_probs=25.8
Q ss_pred CCceEEeccCCcccHHHHHHc----CcceEeecc
Q psy14941 357 PNMKLFISHGGLLGITEAVYE----GIPVLGIPV 386 (513)
Q Consensus 357 ~~~~~~IthgG~~s~~Eal~~----GvP~i~~P~ 386 (513)
..++++|+-||-||+.|++.. ++|++++|.
T Consensus 62 ~~~D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 62 QQADLAVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHCSEEEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cCCCEEEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 457999999999999999843 889999973
No 101
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=37.49 E-value=1.2e+02 Score=29.85 Aligned_cols=139 Identities=9% Similarity=-0.030 Sum_probs=71.1
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCC--CCCCCCCCcEEEecCCCccccccCCCceEEecc
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDND--TSIFKPYKNIRTSSWMPQRDIFAHPNMKLFISH 365 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~Ith 365 (513)
++++++|..|..+ ..-+..+.+.+..+.+.-.... +.+..+..++.+..---+.+.| ..++++|..
T Consensus 12 ~~~vlVvGgG~va----------~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l--~~~~lVi~a 79 (457)
T 1pjq_A 12 DRDCLIVGGGDVA----------ERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLL--DSCWLAIAA 79 (457)
T ss_dssp TCEEEEECCSHHH----------HHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGG--TTCSEEEEC
T ss_pred CCEEEEECCCHHH----------HHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCcccc--CCccEEEEc
Confidence 5677777776654 3344555556777665544211 1110001234333222223334 467888888
Q ss_pred CCccc-----HHHHHHcCcceEeeccccCcHHHHHHH-----HHcCcEEEeccCCCC---HHHHHHHHHHhc-C--HHHH
Q psy14941 366 GGLLG-----ITEAVYEGIPVLGIPVFGDQWANIKKL-----ESLKAGKLLPYLEIT---EETVSDALKIVL-S--PEYK 429 (513)
Q Consensus 366 gG~~s-----~~Eal~~GvP~i~~P~~~DQ~~na~~~-----~~~G~G~~l~~~~~~---~~~l~~ai~~ll-~--~~y~ 429 (513)
-|.-. ..+|-..|+|+-++ |++..+... .+.++=+.+..+..+ +..|++.|.+.+ + ..+.
T Consensus 80 t~~~~~n~~i~~~a~~~~i~vn~~----d~~e~~~~~~pa~~~~~~l~iaIsT~Gksp~la~~ir~~ie~~l~~~~~~~~ 155 (457)
T 1pjq_A 80 TDDDTVNQRVSDAAESRRIFCNVV----DAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPQHLGQVA 155 (457)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEET----TCTTSSSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCTTHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEC----CCcccCceEeeeEEEeCCeEEEEECCCCChHHHHHHHHHHHHhcchhHHHHH
Confidence 77643 45566789997333 333222221 122322233222222 567888888888 4 4566
Q ss_pred HHHHHHHHHHhcC
Q psy14941 430 ENAEDLGTRFRDR 442 (513)
Q Consensus 430 ~~a~~~~~~~~~~ 442 (513)
+.+.++.+.++.+
T Consensus 156 ~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 156 RYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 6666666666543
No 102
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=37.24 E-value=46 Score=29.34 Aligned_cols=38 Identities=8% Similarity=0.025 Sum_probs=32.4
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
.||+ +...+|-|=..-+..+|.+|+++|++|.++..++
T Consensus 7 l~I~-~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 7 LKVF-LGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp EEEE-EESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEE-EECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4565 6777888999999999999999999998887765
No 103
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=36.89 E-value=51 Score=18.95 Aligned_cols=28 Identities=11% Similarity=0.194 Sum_probs=22.4
Q ss_pred HHHHHHHHHhc--CHHHHHHHHHHHHHHhc
Q psy14941 414 ETVSDALKIVL--SPEYKENAEDLGTRFRD 441 (513)
Q Consensus 414 ~~l~~ai~~ll--~~~y~~~a~~~~~~~~~ 441 (513)
.+|.+++.+++ |....+...++++.+..
T Consensus 4 nQLEdkVEeLl~~~~~Le~eV~RL~~ll~~ 33 (34)
T 2hy6_A 4 KQLADAVEELASANYHLANAVARLAKAVGE 33 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHhcc
Confidence 46888999998 77888888888887754
No 104
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=36.34 E-value=16 Score=34.86 Aligned_cols=52 Identities=19% Similarity=0.188 Sum_probs=36.1
Q ss_pred CCceEEeccCCcccHHHHHH----cCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc
Q psy14941 357 PNMKLFISHGGLLGITEAVY----EGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL 424 (513)
Q Consensus 357 ~~~~~~IthgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll 424 (513)
..+|++|+=||-||++.|.. .++|++++=.. -+|.. -+++.+++.+++++++
T Consensus 107 ~~~DlvI~lGGDGT~L~aa~~~~~~~~PvlGiN~G-------------~LGFL---t~~~~~~~~~~l~~vl 162 (365)
T 3pfn_A 107 NQIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLG-------------SLGFL---TPFSFENFQSQVTQVI 162 (365)
T ss_dssp TTCSEEEEESSTTHHHHHHHHCSSSCCCEEEEESS-------------SCTTT---CCEESTTHHHHHHHHH
T ss_pred cCCCEEEEEcChHHHHHHHHHhccCCCCEEEEcCC-------------CCccc---eeecHHHHHHHHHHHH
Confidence 57899999999999999976 36899887321 11111 1345567777777776
No 105
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=36.05 E-value=79 Score=31.80 Aligned_cols=36 Identities=8% Similarity=0.011 Sum_probs=25.4
Q ss_pred hccCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEee
Q psy14941 23 IQQCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 23 ~~~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
...+.|+. ++. .-.-...+++.|.+-|-+|+.+.+.
T Consensus 361 ~l~GKrva-I~g-----d~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 361 WLHGKRFA-LWG-----DPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp HHTTCEEE-EEC-----SHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred hcCCCEEE-EEC-----CchHHHHHHHHHHHcCCEEEEEEeC
Confidence 34678888 442 2345567888888899998887764
No 106
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=35.77 E-value=24 Score=30.62 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=33.1
Q ss_pred cCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEe
Q psy14941 25 QCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~ 63 (513)
...+|| +.+.++..|-....-++..|..+|++|.++..
T Consensus 87 ~~~~vl-l~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~ 124 (210)
T 1y80_A 87 SVGKIV-LGTVKGDLHDIGKNLVAMMLESGGFTVYNLGV 124 (210)
T ss_dssp CCCEEE-EEEBTTCCCCHHHHHHHHHHHHTTCEEEECCS
T ss_pred CCCEEE-EEeCCCcccHHHHHHHHHHHHHCCCEEEECCC
Confidence 456888 66778899999999999999999999998876
No 107
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=35.67 E-value=57 Score=18.77 Aligned_cols=28 Identities=7% Similarity=0.141 Sum_probs=23.3
Q ss_pred HHHHHHHHHhc--CHHHHHHHHHHHHHHhc
Q psy14941 414 ETVSDALKIVL--SPEYKENAEDLGTRFRD 441 (513)
Q Consensus 414 ~~l~~ai~~ll--~~~y~~~a~~~~~~~~~ 441 (513)
.+|.+.+.+++ |.+..+...+++.++..
T Consensus 4 nQLE~kVEeLl~~n~~Le~eV~rLk~ll~~ 33 (34)
T 2oxj_A 4 XQLEXKVXELLXKNXHLEXEVXRLKXLVXE 33 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHhc
Confidence 46888899999 78899999999888754
No 108
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=35.64 E-value=25 Score=30.55 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=29.4
Q ss_pred cCceEeEEcCCCCCChHHH-HHHHHHHHHhCCCcEEEEEeecCC
Q psy14941 25 QCSKILAIFPTPAKSHQII-FDTILVELYQRGHDLTVITQYPET 67 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~-~~~la~~L~~rGH~Vt~~~~~~~~ 67 (513)
++.||++.++. + +..+- ...+.+.|.++|++|.++.+....
T Consensus 4 ~~k~IllgiTG-s-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 4 KGKRIGFGFTG-S-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TTCEEEEEECS-C-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCCEEEEEEEC-h-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 45688855543 3 55554 889999999999999999886543
No 109
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=35.32 E-value=2.2e+02 Score=24.64 Aligned_cols=131 Identities=12% Similarity=0.048 Sum_probs=70.2
Q ss_pred HHHHHHhhcCCCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCC----C-CCCCCCCCcEEEecCCCcc-
Q psy14941 278 EEMERFLNESHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDN----D-TSIFKPYKNIRTSSWMPQR- 351 (513)
Q Consensus 278 ~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~-~~~~~~~~nv~~~~~~pq~- 351 (513)
.++-+++.+ ++..+|+-|... .......++..+.+-+++=..... + ..+ . -.++.+.+.++..
T Consensus 31 ~~lg~~LA~--~g~~lV~GGg~~-------GlM~aa~~gA~~~GG~~iGv~p~~l~~~e~~~~-~-~~~~~~~~~~~~Rk 99 (216)
T 1ydh_A 31 IELGNELVK--RKIDLVYGGGSV-------GLMGLISRRVYEGGLHVLGIIPKALMPIEISGE-T-VGDVRVVADMHERK 99 (216)
T ss_dssp HHHHHHHHH--TTCEEEECCCSS-------HHHHHHHHHHHHTTCCEEEEEEGGGHHHHCCSS-C-CSEEEEESSHHHHH
T ss_pred HHHHHHHHH--CCCEEEECCCcc-------cHhHHHHHHHHHcCCcEEEEechhcCccccccC-C-CCcccccCCHHHHH
Confidence 445556664 567777766532 356666666666655544444321 1 111 1 2345566666543
Q ss_pred ccccCCCceEEeccCCcccHHHHH---------HcCcceEeecc--ccCcHHHH-HHHHHcCcE--------EEeccCCC
Q psy14941 352 DIFAHPNMKLFISHGGLLGITEAV---------YEGIPVLGIPV--FGDQWANI-KKLESLKAG--------KLLPYLEI 411 (513)
Q Consensus 352 ~lL~h~~~~~~IthgG~~s~~Eal---------~~GvP~i~~P~--~~DQ~~na-~~~~~~G~G--------~~l~~~~~ 411 (513)
.++....-.+++.-||.||+-|.. .+++|++.+-. +.|...+- ..+.+.|.= ...+
T Consensus 100 ~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~~~~~~~~~~d---- 175 (216)
T 1ydh_A 100 AAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAP---- 175 (216)
T ss_dssp HHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSCHHHHTTEEEES----
T ss_pred HHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCChHHcCeEEEeC----
Confidence 333222224556678889987776 47999999853 44433332 344444431 2222
Q ss_pred CHHHHHHHHHHh
Q psy14941 412 TEETVSDALKIV 423 (513)
Q Consensus 412 ~~~~l~~ai~~l 423 (513)
|.+++.+.|.+.
T Consensus 176 ~~ee~~~~l~~~ 187 (216)
T 1ydh_A 176 TAKELMEKMEEY 187 (216)
T ss_dssp SHHHHHHHHHHC
T ss_pred CHHHHHHHHHHh
Confidence 566666666543
No 110
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=35.31 E-value=41 Score=26.88 Aligned_cols=38 Identities=8% Similarity=-0.073 Sum_probs=28.7
Q ss_pred eEeEEcCCCCCCh--HHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 28 KILAIFPTPAKSH--QIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 28 kIL~~~p~~~~gH--~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
|+++++..+.+|+ ..-.+.+|.+++..||+|.++-..+
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~D 46 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDD 46 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhH
Confidence 5877777776665 4445777999999999999887643
No 111
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=35.14 E-value=47 Score=31.09 Aligned_cols=43 Identities=9% Similarity=0.081 Sum_probs=36.7
Q ss_pred ccCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecC
Q psy14941 24 QQCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPE 66 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~ 66 (513)
..+.+|+++..-+|-|=......+|..|+++|++|.++..++.
T Consensus 16 ~~~~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~ 58 (329)
T 2woo_A 16 QTSLKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA 58 (329)
T ss_dssp CTTCCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT
T ss_pred CCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 3456788777888899999999999999999999999987653
No 112
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=34.83 E-value=17 Score=35.06 Aligned_cols=52 Identities=21% Similarity=0.244 Sum_probs=37.4
Q ss_pred CCceEEeccCCcccHHHHHHc----Cc-ceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc
Q psy14941 357 PNMKLFISHGGLLGITEAVYE----GI-PVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL 424 (513)
Q Consensus 357 ~~~~~~IthgG~~s~~Eal~~----Gv-P~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll 424 (513)
..++++|+=||-||++.|+.. ++ |+++++.. -+|.. .+++.+++.+++++++
T Consensus 113 ~~~DlVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G-------------~lGFL---t~~~~~~~~~al~~il 169 (388)
T 3afo_A 113 NRTDLLVTLGGDGTILHGVSMFGNTQVPPVLAFALG-------------TLGFL---SPFDFKEHKKVFQEVI 169 (388)
T ss_dssp HHCSEEEEEESHHHHHHHHHTTTTSCCCCEEEEECS-------------SCCSS---CCEEGGGHHHHHHHHH
T ss_pred cCCCEEEEEeCcHHHHHHHHHhcccCCCeEEEEECC-------------CcccC---CcCChHHHHHHHHHHh
Confidence 468999999999999999654 67 79999642 11211 1345677888888877
No 113
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=34.76 E-value=13 Score=34.68 Aligned_cols=52 Identities=29% Similarity=0.337 Sum_probs=36.9
Q ss_pred CCceEEeccCCcccHHHHHHc----CcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc
Q psy14941 357 PNMKLFISHGGLLGITEAVYE----GIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL 424 (513)
Q Consensus 357 ~~~~~~IthgG~~s~~Eal~~----GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll 424 (513)
..++++|+-||-||+.+++.. ++|+++++... +|... ++..+++.++++.++
T Consensus 74 ~~~d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G~-------------~gfl~---~~~~~~~~~~~~~i~ 129 (307)
T 1u0t_A 74 DGCELVLVLGGDGTFLRAAELARNASIPVLGVNLGR-------------IGFLA---EAEAEAIDAVLEHVV 129 (307)
T ss_dssp --CCCEEEEECHHHHHHHHHHHHHHTCCEEEEECSS-------------CCSSC---SEEGGGHHHHHHHHH
T ss_pred cCCCEEEEEeCCHHHHHHHHHhccCCCCEEEEeCCC-------------CccCc---ccCHHHHHHHHHHHH
Confidence 568999999999999999754 89999998421 12111 235677778887777
No 114
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=34.68 E-value=37 Score=27.17 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=26.2
Q ss_pred eEeEEcCCCCCChHH-HHHHHHHHHHhCCCcEEEEEeec
Q psy14941 28 KILAIFPTPAKSHQI-IFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 28 kIL~~~p~~~~gH~~-~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
||++++.+. .|+.. ....+++.|.++|++|.++....
T Consensus 3 ki~I~y~S~-tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 3 KVLIVFGSS-TGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp EEEEEEECS-SSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred eEEEEEECC-CchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 677666654 46654 55667888888999999876543
No 115
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=33.89 E-value=63 Score=29.31 Aligned_cols=40 Identities=13% Similarity=0.235 Sum_probs=33.6
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecC
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPE 66 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~ 66 (513)
.|++.+..-+|-|=..-...||..|+++|++|.++-.++.
T Consensus 2 MkvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D~q 41 (289)
T 2afh_E 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK 41 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred ceEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 4666677777889999999999999999999998877653
No 116
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=33.57 E-value=51 Score=30.26 Aligned_cols=42 Identities=12% Similarity=0.166 Sum_probs=34.9
Q ss_pred cCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecC
Q psy14941 25 QCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPE 66 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~ 66 (513)
...|++++..-+|-|=......||..|+++|++|.++-.++.
T Consensus 39 ~~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~ 80 (307)
T 3end_A 39 TGAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDPK 80 (307)
T ss_dssp -CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESSS
T ss_pred CCceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 346676677888889999999999999999999999877653
No 117
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=33.07 E-value=52 Score=30.64 Aligned_cols=43 Identities=14% Similarity=0.119 Sum_probs=36.7
Q ss_pred ccC-ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecC
Q psy14941 24 QQC-SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPE 66 (513)
Q Consensus 24 ~~~-~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~ 66 (513)
..+ .+|+++..-+|-|=......+|..|+++|++|.++..++.
T Consensus 10 ~~gm~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 10 NKGKTTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDPA 53 (324)
T ss_dssp BTTBCEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCCeEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 344 5777777778899999999999999999999999998763
No 118
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=32.96 E-value=46 Score=28.35 Aligned_cols=37 Identities=16% Similarity=0.070 Sum_probs=27.8
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
.||++.++ ++.| ..-...++++|.++|++|.++.+..
T Consensus 2 k~IllgvT-Gs~a-a~k~~~l~~~L~~~g~~V~vv~T~~ 38 (189)
T 2ejb_A 2 QKIALCIT-GASG-VIYGIKLLQVLEELDFSVDLVISRN 38 (189)
T ss_dssp CEEEEEEC-SSTT-HHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred CEEEEEEE-CHHH-HHHHHHHHHHHHHCCCEEEEEEChh
Confidence 37774444 4445 4568899999999999999998854
No 119
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=32.80 E-value=42 Score=27.09 Aligned_cols=39 Identities=8% Similarity=0.061 Sum_probs=32.5
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
.|+++++.....-...+...+|...++.|++|+++-+..
T Consensus 8 ~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~ 46 (144)
T 2qs7_A 8 KKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFW 46 (144)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehH
Confidence 467777777677788899999999999999999988854
No 120
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=32.74 E-value=20 Score=29.64 Aligned_cols=40 Identities=13% Similarity=0.105 Sum_probs=33.4
Q ss_pred ccCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEee
Q psy14941 24 QQCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
....||+ +...++-.|-.-..-++..|..+|++|.++...
T Consensus 16 ~~~~~vl-la~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 16 RRRYKVL-VAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp CCSCEEE-EEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCCCEEE-EEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 3567888 555567899999999999999999999988753
No 121
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=32.71 E-value=44 Score=31.12 Aligned_cols=35 Identities=23% Similarity=0.323 Sum_probs=23.0
Q ss_pred cCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 25 QCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
...||+ |+.++ .......++|.++||+|..+.+.+
T Consensus 2 ~~mrIv-f~Gt~-----~fa~~~L~~L~~~~~~i~~Vvt~p 36 (314)
T 1fmt_A 2 ESLRII-FAGTP-----DFAARHLDALLSSGHNVVGVFTQP 36 (314)
T ss_dssp CCCEEE-EEECS-----HHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCCEEE-EEecC-----HHHHHHHHHHHHCCCcEEEEEeCC
Confidence 457887 54443 244566678888899998666543
No 122
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=32.57 E-value=42 Score=23.62 Aligned_cols=48 Identities=10% Similarity=-0.000 Sum_probs=31.7
Q ss_pred HcCcceEeeccccCcHHHHH---HHHHcCcEEEeccCCCCHHHHHHHHHHhc
Q psy14941 376 YEGIPVLGIPVFGDQWANIK---KLESLKAGKLLPYLEITEETVSDALKIVL 424 (513)
Q Consensus 376 ~~GvP~i~~P~~~DQ~~na~---~~~~~G~G~~l~~~~~~~~~l~~ai~~ll 424 (513)
-.|+|++++--.+.|.+--. .+.+.|+..-+-+ ..+++++.+.+++.+
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvlk-stdpeeltqrvrefl 99 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLK-STDPEELTQRVREFL 99 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEE-CCCHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhc-cCCHHHHHHHHHHHH
Confidence 36899988877666654332 2334577665543 558899998888765
No 123
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=32.21 E-value=1.2e+02 Score=27.15 Aligned_cols=40 Identities=8% Similarity=0.076 Sum_probs=25.7
Q ss_pred ccCceEeEEcCCCCCChHH-HHHHHHHHHHhCCCcEEEEEe
Q psy14941 24 QQCSKILAIFPTPAKSHQI-IFDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~gH~~-~~~~la~~L~~rGH~Vt~~~~ 63 (513)
..+.+|.+++|......+. ....+-+++.++|+++.+...
T Consensus 6 ~~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 46 (291)
T 3egc_A 6 KRSNVVGLIVSDIENVFFAEVASGVESEARHKGYSVLLANT 46 (291)
T ss_dssp -CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCcEEEEEECCCcchHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3556787777765443333 344566777888999887654
No 124
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=32.18 E-value=48 Score=28.44 Aligned_cols=36 Identities=11% Similarity=0.038 Sum_probs=27.2
Q ss_pred eEeEEcCCCCCChHHHHHHHHHHHHhC-CCcEEEEEeec
Q psy14941 28 KILAIFPTPAKSHQIIFDTILVELYQR-GHDLTVITQYP 65 (513)
Q Consensus 28 kIL~~~p~~~~gH~~~~~~la~~L~~r-GH~Vt~~~~~~ 65 (513)
||++.++ ++ +...-...+.+.|.++ |++|.++.+..
T Consensus 2 ~IllgvT-Gs-iaa~k~~~ll~~L~~~~g~~V~vv~T~~ 38 (197)
T 1sbz_A 2 KLIVGMT-GA-TGAPLGVALLQALREMPNVETHLVMSKW 38 (197)
T ss_dssp EEEEEEC-SS-SCHHHHHHHHHHHHTCTTCEEEEEECHH
T ss_pred EEEEEEe-Ch-HHHHHHHHHHHHHHhccCCEEEEEECch
Confidence 6774443 34 4445599999999999 99999998854
No 125
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=32.12 E-value=20 Score=30.86 Aligned_cols=39 Identities=10% Similarity=0.048 Sum_probs=29.6
Q ss_pred cCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 25 QCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
.+.||++.++ |.+...-...+++.|.++|++|.++.+..
T Consensus 7 ~~k~IllgvT--Gs~aa~k~~~l~~~L~~~g~~V~vv~T~~ 45 (194)
T 1p3y_1 7 KDKKLLIGIC--GSISSVGISSYLLYFKSFFKEIRVVMTKT 45 (194)
T ss_dssp GGCEEEEEEC--SCGGGGGTHHHHHHHTTTSSEEEEEECHH
T ss_pred CCCEEEEEEE--CHHHHHHHHHHHHHHHHCCCEEEEEEchh
Confidence 4568884444 33555568899999999999999998854
No 126
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=31.98 E-value=41 Score=31.36 Aligned_cols=35 Identities=23% Similarity=0.394 Sum_probs=23.8
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCC
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPET 67 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~ 67 (513)
.||+ |+..+. ......++|.++||+|..+.+.+.+
T Consensus 5 mrIv-f~Gtp~-----fa~~~L~~L~~~~~~v~~Vvt~pd~ 39 (317)
T 3rfo_A 5 IKVV-FMGTPD-----FSVPVLRRLIEDGYDVIGVVTQPDR 39 (317)
T ss_dssp SEEE-EECCST-----THHHHHHHHHHTTCEEEEEECCCCC
T ss_pred eEEE-EEeCCH-----HHHHHHHHHHHCCCcEEEEEeCCCc
Confidence 5787 666553 3345668888899999877765443
No 127
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=31.87 E-value=1.4e+02 Score=26.70 Aligned_cols=39 Identities=13% Similarity=0.083 Sum_probs=23.8
Q ss_pred cCceEeEEcCCCCC--ChHH-HHHHHHHHHHhCCCcEEEEEe
Q psy14941 25 QCSKILAIFPTPAK--SHQI-IFDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 25 ~~~kIL~~~p~~~~--gH~~-~~~~la~~L~~rGH~Vt~~~~ 63 (513)
.+..|-+++|.... ..+. ....+.+++.++|+++.+...
T Consensus 7 ~s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 48 (288)
T 3gv0_A 7 KTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLVVTPH 48 (288)
T ss_dssp CCCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSSCEEEECCB
T ss_pred CCCEEEEEecCCccccHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 45677777776542 2333 344566677788988776543
No 128
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=31.56 E-value=1.9e+02 Score=25.83 Aligned_cols=37 Identities=16% Similarity=0.082 Sum_probs=24.0
Q ss_pred CCccEEEEcc-chhchHHhhhhccCCCEEEEeCCCCch
Q psy14941 131 NKYDLIITEM-FLTDAFLVIPYLYKVPYISIASSTLHP 167 (513)
Q Consensus 131 ~~~Dlvi~d~-~~~~~~~~~a~~l~iP~i~~~~~~~~~ 167 (513)
..||++|+-. ....-++.=|.++|||+|.+..+...+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~dp 194 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDP 194 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTSCG
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCCCc
Confidence 5799877543 322223346778999999987665543
No 129
>2kpo_A Rossmann 2X2 fold protein; de novo designed, rossmann fold, NESG, GFT structural G PSI-2, protein structure initiative; NMR {Artificial gene}
Probab=30.81 E-value=57 Score=22.86 Aligned_cols=64 Identities=20% Similarity=0.248 Sum_probs=46.3
Q ss_pred HHHcCcEEEeccCCCCHHHHHHHHHHh-----------c--CHHHHHHHHHHHHHHh----cCCCChHHHHHHHHHHHHH
Q psy14941 397 LESLKAGKLLPYLEITEETVSDALKIV-----------L--SPEYKENAEDLGTRFR----DRPQSPLEVAIYWIEYVIK 459 (513)
Q Consensus 397 ~~~~G~G~~l~~~~~~~~~l~~ai~~l-----------l--~~~y~~~a~~~~~~~~----~~~~~~~~~a~~~ie~~~~ 459 (513)
++...+-+.-- -|++++.+-+.+. + |++-.++|+++++++. .+...+.+.|-.||...-+
T Consensus 22 aekanlelrtv---ktedelkkyleefrkesqnikvlilvsndeeldkakelaqkmeidvrtrkvtspdeakrwikefse 98 (110)
T 2kpo_A 22 AEKANLELRTV---KTEDELKKYLEEFRKESQNIKVLILVSNDEELDKAKELAQKMEIDVRTRKVTSPDEAKRWIKEFSE 98 (110)
T ss_dssp HHHHTCEEEEC---CSHHHHHHHHHHHTSSTTSEEEEEEESSHHHHHHHHHHHHHTTCCEEEEECSSHHHHHHHHHHHHH
T ss_pred HHhcCceeeee---ccHHHHHHHHHHHHhhccCeEEEEEEcChHHHHHHHHHHHhhceeeeeeecCChHHHHHHHHHHhh
Confidence 34455554432 2788888887763 3 6778889999998874 3345778999999999988
Q ss_pred hCCC
Q psy14941 460 YNGA 463 (513)
Q Consensus 460 ~~~~ 463 (513)
.||.
T Consensus 99 eggs 102 (110)
T 2kpo_A 99 EGGS 102 (110)
T ss_dssp TTSS
T ss_pred ccCC
Confidence 8775
No 130
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=30.76 E-value=43 Score=28.85 Aligned_cols=30 Identities=13% Similarity=0.150 Sum_probs=22.3
Q ss_pred CceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEE
Q psy14941 289 NGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWK 327 (513)
Q Consensus 289 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 327 (513)
+.++.+-+|+.. +..+.+++++++..+.+.
T Consensus 3 ~~I~iiD~g~~n---------~~si~~al~~~G~~~~v~ 32 (211)
T 4gud_A 3 QNVVIIDTGCAN---------ISSVKFAIERLGYAVTIS 32 (211)
T ss_dssp CCEEEECCCCTT---------HHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEECCCCh---------HHHHHHHHHHCCCEEEEE
Confidence 467888888753 467888999998876653
No 131
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=30.53 E-value=53 Score=29.85 Aligned_cols=40 Identities=25% Similarity=0.365 Sum_probs=28.3
Q ss_pred cCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 25 QCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
.+.+||++.|+|- ==..-+-.....++++|++|++++-..
T Consensus 6 ~~~rvLvv~aHPD-De~lg~GGtia~~~~~G~~V~vv~~T~ 45 (273)
T 3dff_A 6 GATRLLAISPHLD-DAVLSFGAGLAQAAQDGANVLVYTVFA 45 (273)
T ss_dssp --CEEEEEESSTT-HHHHHHHHHHHHHHHTTCEEEEEETTC
T ss_pred CCCCEEEEEeCCC-hHHHhHHHHHHHHHHCCCcEEEEEEeC
Confidence 4679999999984 223455566667788999999988643
No 132
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=30.52 E-value=68 Score=18.33 Aligned_cols=28 Identities=4% Similarity=0.037 Sum_probs=22.0
Q ss_pred HHHHHHHHHhc--CHHHHHHHHHHHHHHhc
Q psy14941 414 ETVSDALKIVL--SPEYKENAEDLGTRFRD 441 (513)
Q Consensus 414 ~~l~~ai~~ll--~~~y~~~a~~~~~~~~~ 441 (513)
.+|.+.+.+++ +....+...+++.++..
T Consensus 3 nQLEdKvEeLl~~~~~Le~EV~RLk~lL~~ 32 (33)
T 3c3g_A 3 KXIEXKLXEIXSKXYHXENXLARIKXLLXE 32 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHHHHcc
Confidence 46788899998 77888888888887753
No 133
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=30.32 E-value=1.8e+02 Score=22.16 Aligned_cols=105 Identities=12% Similarity=0.112 Sum_probs=57.3
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEEcCCC----CCCCCCCCcEEEecCCCccccccCCCceEEeccCCcccHHHHH---Hc
Q psy14941 305 FPPDKFKAFLKAFSKIPQRVLWKFEDND----TSIFKPYKNIRTSSWMPQRDIFAHPNMKLFISHGGLLGITEAV---YE 377 (513)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG~~s~~Eal---~~ 377 (513)
........+...+++.++.+.+.....+ +.. . ...+.+.++.|..+ |. .+.+.+ ..
T Consensus 12 d~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~-~-~~dlvi~d~~~~~~--------------g~-~~~~~l~~~~~ 74 (142)
T 2qxy_A 12 ESRITFLAVKNALEKDGFNVIWAKNEQEAFTFLRR-E-KIDLVFVDVFEGEE--------------SL-NLIRRIREEFP 74 (142)
T ss_dssp SCHHHHHHHHHHHGGGTCEEEEESSHHHHHHHHTT-S-CCSEEEEECTTTHH--------------HH-HHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHhc-c-CCCEEEEeCCCCCc--------------HH-HHHHHHHHHCC
Confidence 3455666677777776777664332221 112 2 34555555432211 11 122222 23
Q ss_pred CcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc-CHHH
Q psy14941 378 GIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-SPEY 428 (513)
Q Consensus 378 GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-~~~y 428 (513)
.+|+|++--..| ......+.+.|+--.+. +.++.++|.++|++++ ...+
T Consensus 75 ~~pii~ls~~~~-~~~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~~~~~~~ 124 (142)
T 2qxy_A 75 DTKVAVLSAYVD-KDLIINSVKAGAVDYIL-KPFRLDYLLERVKKIISSTPR 124 (142)
T ss_dssp TCEEEEEESCCC-HHHHHHHHHHTCSCEEE-SSCCHHHHHHHHHHHHHC---
T ss_pred CCCEEEEECCCC-HHHHHHHHHCCcceeEe-CCCCHHHHHHHHHHHHhhccc
Confidence 688888754433 45556666777655554 3789999999999998 5433
No 134
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=30.32 E-value=1.3e+02 Score=26.78 Aligned_cols=39 Identities=8% Similarity=-0.003 Sum_probs=24.1
Q ss_pred cCceEeEEcCCCCCChHH-HHHHHHHHHHhCCCcEEEEEe
Q psy14941 25 QCSKILAIFPTPAKSHQI-IFDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~-~~~~la~~L~~rGH~Vt~~~~ 63 (513)
...+|.+++|......+. ....+-+++.+.|+++.+...
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 46 (293)
T 3l6u_A 7 KRNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATS 46 (293)
T ss_dssp --CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECC
Confidence 456787777765433333 345566777788999887654
No 135
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=30.29 E-value=1.2e+02 Score=26.34 Aligned_cols=115 Identities=13% Similarity=0.100 Sum_probs=59.0
Q ss_pred CceEEeCcccccCCC---CCcHHHHHHhhcCCCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEE---EcCCCC
Q psy14941 260 ANVVEIGGIHVKPAK---KLNEEMERFLNESHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWK---FEDNDT 333 (513)
Q Consensus 260 p~~~~vG~l~~~~~~---~l~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~~ 333 (513)
|.+-.+|+-...... ..-.++-+++.+ ++..+|+-|.. .......++..+.+.+++=+ +...+.
T Consensus 38 ~~VaV~Gss~~~~~~~~~~~A~~lg~~La~--~g~~lVsGGg~--------GiM~aa~~gAl~~gG~~iGV~~~~P~~~~ 107 (217)
T 1wek_A 38 PLVSVFGSARFGEGHPAYEAGYRLGRALAE--AGFGVVTGGGP--------GVMEAVNRGAYEAGGVSVGLNIELPHEQK 107 (217)
T ss_dssp CEEEEECCSSCCTTSHHHHHHHHHHHHHHH--HTCEEEECSCS--------HHHHHHHHHHHHTTCCEEEEEECCTTCCC
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHH--CCCEEEeCChh--------hHHHHHHHHHHHcCCCEEEEeeCCcchhh
Confidence 556666765443211 223445555553 57888886653 35556666655555433332 333222
Q ss_pred CCCCCCCcEEEecCCCcc-ccccCCCceEEeccCCcccHHHHH---H-------cCcceEeec
Q psy14941 334 SIFKPYKNIRTSSWMPQR-DIFAHPNMKLFISHGGLLGITEAV---Y-------EGIPVLGIP 385 (513)
Q Consensus 334 ~~~~~~~nv~~~~~~pq~-~lL~h~~~~~~IthgG~~s~~Eal---~-------~GvP~i~~P 385 (513)
.+-. -+.....+.+++. .++....-..++--||.||+.|.. . +++|++.+-
T Consensus 108 ~~~~-~t~~~~~~~f~~Rk~~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~ 169 (217)
T 1wek_A 108 PNPY-QTHALSLRYFFVRKVLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLD 169 (217)
T ss_dssp CCSC-CSEEEEESCHHHHHHHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEEC
T ss_pred cccc-CCcCcccCCHHHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeC
Confidence 2201 1223444555543 333322223445678888876653 2 579999885
No 136
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=30.17 E-value=3.1e+02 Score=25.09 Aligned_cols=105 Identities=12% Similarity=-0.020 Sum_probs=54.2
Q ss_pred ceEEEEeCcccccCCCCHHHHHHHHHHHhcCCC-eEEEEEcCCC--CCCCCCCCcEEEe-cCCCccccccCCCceEEecc
Q psy14941 290 GVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQ-RVLWKFEDND--TSIFKPYKNIRTS-SWMPQRDIFAHPNMKLFISH 365 (513)
Q Consensus 290 ~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~--~~~~~~~~nv~~~-~~~pq~~lL~h~~~~~~Ith 365 (513)
++-++..|.++ ..++.++.+.+. +++..++.+. ... . .+..-+. .+-...+++..+.+|+++--
T Consensus 7 rigiiG~G~ig----------~~~~~~l~~~~~~~~~av~d~~~~~~~~-~-a~~~~~~~~~~~~~~ll~~~~~D~V~i~ 74 (329)
T 3evn_A 7 RYGVVSTAKVA----------PRFIEGVRLAGNGEVVAVSSRTLESAQA-F-ANKYHLPKAYDKLEDMLADESIDVIYVA 74 (329)
T ss_dssp EEEEEBCCTTH----------HHHHHHHHHHCSEEEEEEECSCSSTTCC-----CCCCSCEESCHHHHHTCTTCCEEEEC
T ss_pred EEEEEechHHH----------HHHHHHHHhCCCcEEEEEEcCCHHHHHH-H-HHHcCCCcccCCHHHHhcCCCCCEEEEC
Confidence 46677777765 234555555554 5555555432 111 1 1111111 12344678877788887754
Q ss_pred CCcc----cHHHHHHcCcceEe-eccccC--cH-HHHHHHHHcCcEEEe
Q psy14941 366 GGLL----GITEAVYEGIPVLG-IPVFGD--QW-ANIKKLESLKAGKLL 406 (513)
Q Consensus 366 gG~~----s~~Eal~~GvP~i~-~P~~~D--Q~-~na~~~~~~G~G~~l 406 (513)
--.. .+.+|+.+|+++++ -|+..+ +- .-...+++.|+-+.+
T Consensus 75 tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v 123 (329)
T 3evn_A 75 TINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLME 123 (329)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 4433 35677888888777 366432 22 222334455655444
No 137
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=30.15 E-value=2.6e+02 Score=25.51 Aligned_cols=104 Identities=13% Similarity=0.069 Sum_probs=56.8
Q ss_pred CceEEEEeCcccccCCCCHHHHHHHHHHHhcCCC-eEEEEEcCCC--CCCCCCCCcEEEecCCCccccccCCCceEEecc
Q psy14941 289 NGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQ-RVLWKFEDND--TSIFKPYKNIRTSSWMPQRDIFAHPNMKLFISH 365 (513)
Q Consensus 289 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~--~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~Ith 365 (513)
-++.++..|.++. .++.++.+.+. +++..++.+. ... . .+.+. .+-...+++..+.+++++.-
T Consensus 11 ~~igiIG~G~~g~----------~~~~~l~~~~~~~~v~v~d~~~~~~~~-~-~~~~~--~~~~~~~~l~~~~~D~V~i~ 76 (315)
T 3c1a_A 11 VRLALIGAGRWGK----------NYIRTIAGLPGAALVRLASSNPDNLAL-V-PPGCV--IESDWRSVVSAPEVEAVIIA 76 (315)
T ss_dssp EEEEEEECTTTTT----------THHHHHHHCTTEEEEEEEESCHHHHTT-C-CTTCE--EESSTHHHHTCTTCCEEEEE
T ss_pred ceEEEECCcHHHH----------HHHHHHHhCCCcEEEEEEeCCHHHHHH-H-HhhCc--ccCCHHHHhhCCCCCEEEEe
Confidence 3577888888762 24455555554 5555555432 122 2 22222 22344577766778887765
Q ss_pred CCcc----cHHHHHHcCcceEee-ccccCc---HHHHHHHHHcCcEEEe
Q psy14941 366 GGLL----GITEAVYEGIPVLGI-PVFGDQ---WANIKKLESLKAGKLL 406 (513)
Q Consensus 366 gG~~----s~~Eal~~GvP~i~~-P~~~DQ---~~na~~~~~~G~G~~l 406 (513)
-... .+.+|+.+|+++++- |+..+- ..-...+++.|+-+.+
T Consensus 77 tp~~~h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~ 125 (315)
T 3c1a_A 77 TPPATHAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWV 125 (315)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEE
T ss_pred CChHHHHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 4433 355678888888775 765332 2223334455655544
No 138
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=30.14 E-value=33 Score=26.58 Aligned_cols=39 Identities=15% Similarity=0.236 Sum_probs=28.3
Q ss_pred ceEeEEcCCCCCChH-HHHHHHHHHHHhCC--CcEEEEEeec
Q psy14941 27 SKILAIFPTPAKSHQ-IIFDTILVELYQRG--HDLTVITQYP 65 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~-~~~~~la~~L~~rG--H~Vt~~~~~~ 65 (513)
.|++++....-.... +..+..|....++| |+|.++--.+
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~ 49 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGA 49 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSH
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECC
Confidence 688867666433333 44788899999999 8999887643
No 139
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=29.98 E-value=1.5e+02 Score=23.27 Aligned_cols=56 Identities=7% Similarity=0.060 Sum_probs=37.1
Q ss_pred cCcceEeeccccCcHHHHHHHHHcCcEEEeccCCCCHHHHHHHHHHhc-CHHHHHHHHH
Q psy14941 377 EGIPVLGIPVFGDQWANIKKLESLKAGKLLPYLEITEETVSDALKIVL-SPEYKENAED 434 (513)
Q Consensus 377 ~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~~~~~~~~~l~~ai~~ll-~~~y~~~a~~ 434 (513)
.++|+|++--..+ ......+.+.|+--.+. +.++.++|.++|+.++ ....+...++
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~g~~~~l~-kP~~~~~L~~~i~~~~~~~~~~~~~~~ 130 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQDGAYDFIA-KPFAADRLVQSARRAEEKRRLVMENRS 130 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHTTCCEEEE-SSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhcCCCeEEe-CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788888754333 44555666777755554 3789999999999998 5554443333
No 140
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=29.82 E-value=74 Score=26.79 Aligned_cols=38 Identities=18% Similarity=0.385 Sum_probs=30.9
Q ss_pred eEeEEc-CCCCCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 28 KILAIF-PTPAKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 28 kIL~~~-p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
||+.+. +-+|-|=..-...||..|+++|++|.++-.++
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~ 40 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDP 40 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 444444 66778999999999999999999999887654
No 141
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=29.66 E-value=1.4e+02 Score=26.22 Aligned_cols=38 Identities=16% Similarity=0.166 Sum_probs=24.3
Q ss_pred CceEeEEcCCCCCChHH-HHHHHHHHHHhCCCcEEEEEe
Q psy14941 26 CSKILAIFPTPAKSHQI-IFDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 26 ~~kIL~~~p~~~~gH~~-~~~~la~~L~~rGH~Vt~~~~ 63 (513)
+.+|-+++|......+. ....+-+++.++|+++.+...
T Consensus 2 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 40 (272)
T 3o74_A 2 TRTLGFILPDLENPSYARIAKQLEQGARARGYQLLIASS 40 (272)
T ss_dssp CCEEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ceEEEEEeCCCcChhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 45677677765443333 344566677788999887654
No 142
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=29.38 E-value=77 Score=25.85 Aligned_cols=37 Identities=11% Similarity=0.132 Sum_probs=27.3
Q ss_pred ceEeEEcCCCCCChHH-HHHHHHHHHHhCCCcEEEEEee
Q psy14941 27 SKILAIFPTPAKSHQI-IFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~-~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
.||++++.++. |+.. ....+++.|.+.|++|.++...
T Consensus 5 ~kv~IvY~S~~-GnT~~iA~~ia~~l~~~g~~v~~~~~~ 42 (159)
T 3fni_A 5 TSIGVFYVSEY-GYSDRLAQAIINGITKTGVGVDVVDLG 42 (159)
T ss_dssp CEEEEEECTTS-TTHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEEECCC-hHHHHHHHHHHHHHHHCCCeEEEEECc
Confidence 47887777664 6664 5567889999999999877653
No 143
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=29.38 E-value=61 Score=29.34 Aligned_cols=40 Identities=28% Similarity=0.356 Sum_probs=29.3
Q ss_pred cCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 25 QCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
.+.+||++.|+|- ==..-+-.....++++|++|++++-..
T Consensus 6 ~~~rvLvv~aHPD-De~l~~GGtia~~~~~G~~V~vv~~T~ 45 (270)
T 3dfi_A 6 DRTRILAISPHLD-DAVLSVGASLAQAEQDGGKVTVFTVFA 45 (270)
T ss_dssp CCSEEEEEESSTT-HHHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEEEeCCc-hHHHhhHHHHHHHHhCCCeEEEEEEeC
Confidence 4679999999984 223455566667778999999988643
No 144
>2hac_A T-cell surface glycoprotein CD3 zeta chain; transmembrane, alpha helix, membrane protein; NMR {Homo sapiens}
Probab=29.35 E-value=71 Score=18.35 Aligned_cols=18 Identities=33% Similarity=0.491 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy14941 479 YLLDIALVLIVGLVSVCF 496 (513)
Q Consensus 479 ~~lDv~~~~~~~~~~~~~ 496 (513)
|-||.++++..+++-.+|
T Consensus 6 YiLDgiL~iYgii~T~Ly 23 (33)
T 2hac_A 6 YLLDGILFIYGVILTALF 23 (33)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred eehHHHHHHHHHHHHHHH
Confidence 778988777665544443
No 145
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=29.29 E-value=62 Score=27.54 Aligned_cols=39 Identities=10% Similarity=0.130 Sum_probs=28.8
Q ss_pred CceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEee
Q psy14941 26 CSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 26 ~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
..||++++..+...+-.....+++.++++|++|.++.-.
T Consensus 106 ~~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G 144 (192)
T 2x5n_A 106 RQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIG 144 (192)
T ss_dssp EEEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred CceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeC
Confidence 345554655544556777889999999999999988764
No 146
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=28.99 E-value=50 Score=29.05 Aligned_cols=86 Identities=12% Similarity=0.155 Sum_probs=55.6
Q ss_pred cHHHHHHhhcCCCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCcEEEecCCCccccccC
Q psy14941 277 NEEMERFLNESHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDNDTSIFKPYKNIRTSSWMPQRDIFAH 356 (513)
Q Consensus 277 ~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~h 356 (513)
.+.+++|+.. ...++++..|+.. .........+.++|++++..+..... .++ +. +.+
T Consensus 21 ~~~l~~~~~~-~~~i~iI~~a~~~---~~~~~~~~~~~~al~~lG~~~~~v~~---------~~d-------~~-~~l-- 77 (229)
T 1fy2_A 21 LPLIANQLNG-RRSAVFIPFAGVT---QTWDEYTDKTAEVLAPLGVNVTGIHR---------VAD-------PL-AAI-- 77 (229)
T ss_dssp HHHHHHHHTT-CCEEEEECTTCCS---SCHHHHHHHHHHHHGGGTCEEEETTS---------SSC-------HH-HHH--
T ss_pred HHHHHHHhcC-CCeEEEEECCCCC---CCHHHHHHHHHHHHHHCCCEEEEEec---------ccc-------HH-HHH--
Confidence 5668888874 5778899888642 23567788999999998875444210 100 11 223
Q ss_pred CCceEEeccCCcc--------------cHHHHHHcCcceEeec
Q psy14941 357 PNMKLFISHGGLL--------------GITEAVYEGIPVLGIP 385 (513)
Q Consensus 357 ~~~~~~IthgG~~--------------s~~Eal~~GvP~i~~P 385 (513)
.+++.+|--||.. .+.|++..|+|++++-
T Consensus 78 ~~ad~I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~s 120 (229)
T 1fy2_A 78 EKAEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWS 120 (229)
T ss_dssp HHCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEET
T ss_pred hcCCEEEECCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEEC
Confidence 4567777777742 2455666899999875
No 147
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=28.85 E-value=3e+02 Score=24.25 Aligned_cols=37 Identities=5% Similarity=-0.117 Sum_probs=22.9
Q ss_pred CceEeEEcCC-C---CCChH-HHHHHHHHHHHhCCCcEEEEE
Q psy14941 26 CSKILAIFPT-P---AKSHQ-IIFDTILVELYQRGHDLTVIT 62 (513)
Q Consensus 26 ~~kIL~~~p~-~---~~gH~-~~~~~la~~L~~rGH~Vt~~~ 62 (513)
+.+|-+++|. . ....+ .....+.+++.++|+++.+..
T Consensus 4 s~~Ig~i~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 45 (287)
T 3bbl_A 4 SFMIGYSWTQTEPGQVNHILDQFLSSMVREAGAVNYFVLPFP 45 (287)
T ss_dssp CCEEEECCCCCCTTCSCCTHHHHHHHHHHHHHHTTCEEEECC
T ss_pred eeEEEEEecccccccCChhHHHHHHHHHHHHHHcCCEEEEEe
Confidence 4567666665 3 33333 344566777888999987643
No 148
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=28.83 E-value=75 Score=20.73 Aligned_cols=20 Identities=15% Similarity=0.110 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy14941 481 LDIALVLIVGLVSVCFVLKY 500 (513)
Q Consensus 481 lDv~~~~~~~~~~~~~~~~~ 500 (513)
+-+++-+++..++++.+||+
T Consensus 14 ~svl~GLLLL~Lii~~LwK~ 33 (54)
T 2l8s_A 14 LSAFAGLLLLMLLILALWKI 33 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 33333333333444555554
No 149
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=28.72 E-value=1.5e+02 Score=29.80 Aligned_cols=37 Identities=16% Similarity=0.055 Sum_probs=26.3
Q ss_pred hccCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 23 IQQCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 23 ~~~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
...+.|++ ++. .-.-..++++.|.+-|-+|..+....
T Consensus 357 ~l~Gkrv~-i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~ 393 (519)
T 1qgu_B 357 WLHGKKFG-LYG-----DPDFVMGLTRFLLELGCEPTVILSHN 393 (519)
T ss_dssp HHTTCEEE-EES-----CHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred HcCCCEEE-EEC-----CchHHHHHHHHHHHCCCEEEEEEeCC
Confidence 44678888 443 23456788888889999998777643
No 150
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=28.43 E-value=31 Score=29.19 Aligned_cols=39 Identities=21% Similarity=0.231 Sum_probs=29.8
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCC
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPET 67 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~ 67 (513)
.||++.++ |.+...-...+.++|.++|++|.++.+....
T Consensus 3 k~IllgvT--Gs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~ 41 (181)
T 1g63_A 3 GKLLICAT--ASINVININHYIVELKQHFDEVNILFSPSSK 41 (181)
T ss_dssp CCEEEEEC--SCGGGGGHHHHHHHHTTTSSCEEEEECGGGG
T ss_pred CEEEEEEE--CHHHHHHHHHHHHHHHHCCCEEEEEEchhHH
Confidence 47774444 3466668899999999999999999886543
No 151
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=28.33 E-value=36 Score=30.11 Aligned_cols=23 Identities=22% Similarity=0.226 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhCCCcEEEEEeec
Q psy14941 43 IFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 43 ~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
.-.++|++|+++|++|+++..+.
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCc
Confidence 45678999999999999998754
No 152
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=27.86 E-value=3.4e+02 Score=24.46 Aligned_cols=101 Identities=11% Similarity=-0.025 Sum_probs=54.4
Q ss_pred CceEEeccCCcccHHHH-----HHc---CcceEeeccccCcHHHHH-----HHHHcC-cEEEeccCC---CCHHHHHHHH
Q psy14941 358 NMKLFISHGGLLGITEA-----VYE---GIPVLGIPVFGDQWANIK-----KLESLK-AGKLLPYLE---ITEETVSDAL 420 (513)
Q Consensus 358 ~~~~~IthgG~~s~~Ea-----l~~---GvP~i~~P~~~DQ~~na~-----~~~~~G-~G~~l~~~~---~~~~~l~~ai 420 (513)
.++++|.--|-..+.+. -.. |+|+-++ |.+.++. .+.+-+ +-+.+.... .-+..|++.|
T Consensus 106 ~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VNvv----d~pel~~f~~Pa~~~~g~~l~IaIST~Gksp~lA~~ir~~i 181 (274)
T 1kyq_A 106 AWYIIMTCIPDHPESARIYHLCKERFGKQQLVNVA----DKPDLCDFYFGANLEIGDRLQILISTNGLSPRFGALVRDEI 181 (274)
T ss_dssp CEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEET----TCGGGBSEECCEEEEETTTEEEEEEESSSCHHHHHHHHHHH
T ss_pred CeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEEEC----CCcccCeeEeeeEEEeCCCEEEEEECCCCCcHHHHHHHHHH
Confidence 68899988886533333 333 6666333 3333333 222223 333343322 2335677777
Q ss_pred HHhc---C----HHHHHHHHHHHHHHhcCCCChH--HHHHHHHHHHHHhCC
Q psy14941 421 KIVL---S----PEYKENAEDLGTRFRDRPQSPL--EVAIYWIEYVIKYNG 462 (513)
Q Consensus 421 ~~ll---~----~~y~~~a~~~~~~~~~~~~~~~--~~a~~~ie~~~~~~~ 462 (513)
.+.+ . ..+-+.+.++.+.++.+--+.. .+=.+|.+.+.+..+
T Consensus 182 e~~l~~~p~~~~~~~~~~l~~~R~~ik~~~~~~~~~~rR~~w~~~i~~~~~ 232 (274)
T 1kyq_A 182 RNLFTQMGDLALEDAVVKLGELRRGIRLLAPDDKDVKYRMDWARRCTDLFG 232 (274)
T ss_dssp HHHHHHHCCCCHHHHHHHHHHHHHHHHHHSCSGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCchhHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHHhccHh
Confidence 7776 4 3566777777777775532321 234677777776533
No 153
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=27.82 E-value=67 Score=28.55 Aligned_cols=40 Identities=13% Similarity=0.112 Sum_probs=29.0
Q ss_pred cCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 25 QCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
+..+||++.|+|. ==...+-.....++++|++|++++-..
T Consensus 2 ~~~~vL~v~aHPD-De~l~~Ggtia~~~~~G~~V~vv~lT~ 41 (242)
T 2ixd_A 2 SGLHILAFGAHAD-DVEIGMAGTIAKYTKQGYEVGICDLTE 41 (242)
T ss_dssp CCCSEEEEESSTT-HHHHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred CCccEEEEEeCCC-hHHHhHHHHHHHHHHCCCeEEEEEEcC
Confidence 4578999999985 224455566677788999999887643
No 154
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=27.78 E-value=35 Score=30.85 Aligned_cols=34 Identities=15% Similarity=0.249 Sum_probs=22.4
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhC--CCcEEEEE
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQR--GHDLTVIT 62 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~r--GH~Vt~~~ 62 (513)
..|+ ++...+ |+......+++.|+++ |++|..+-
T Consensus 37 ~~vv-llHG~~-~~~~~~~~~~~~L~~~~~g~~vi~~D 72 (302)
T 1pja_A 37 KPVI-VVHGLF-DSSYSFRHLLEYINETHPGTVVTVLD 72 (302)
T ss_dssp CCEE-EECCTT-CCGGGGHHHHHHHHHHSTTCCEEECC
T ss_pred CeEE-EECCCC-CChhHHHHHHHHHHhcCCCcEEEEec
Confidence 3344 555544 4444578899999998 88876543
No 155
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=27.52 E-value=76 Score=27.67 Aligned_cols=38 Identities=18% Similarity=0.134 Sum_probs=26.0
Q ss_pred ceEeEEcCCCCC----ChHHH--HHHHHHHHHhCCCcEEEEEee
Q psy14941 27 SKILAIFPTPAK----SHQII--FDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 27 ~kIL~~~p~~~~----gH~~~--~~~la~~L~~rGH~Vt~~~~~ 64 (513)
.|||++..+|.. +-.+. ...+++.|.+.||+|.++-..
T Consensus 26 ~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL~ 69 (218)
T 3rpe_A 26 SNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTVD 69 (218)
T ss_dssp CCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEGG
T ss_pred cceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 599999988853 22332 234566666789999987764
No 156
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=27.48 E-value=69 Score=28.97 Aligned_cols=40 Identities=10% Similarity=0.010 Sum_probs=26.0
Q ss_pred ccCceEeEEcCCCCCCh-H-HHHHHHHHHHHhCCCcEEEEEe
Q psy14941 24 QQCSKILAIFPTPAKSH-Q-IIFDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~gH-~-~~~~~la~~L~~rGH~Vt~~~~ 63 (513)
..+..|.+++|...... . .....+.+++.++|+++.+...
T Consensus 11 ~~s~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 52 (301)
T 3miz_A 11 SRSNTFGIITDYVSTTPYSVDIVRGIQDWANANGKTILIANT 52 (301)
T ss_dssp -CCCEEEEEESSTTTCCSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCEEEEEeCCCcCcccHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 34567776777654332 2 4566777888888998876654
No 157
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=27.45 E-value=1.4e+02 Score=27.10 Aligned_cols=39 Identities=15% Similarity=0.133 Sum_probs=26.2
Q ss_pred cCceEeEEcCCCCCChHHH-HHHHHHHHHhCCCcEEEEEe
Q psy14941 25 QCSKILAIFPTPAKSHQII-FDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~-~~~la~~L~~rGH~Vt~~~~ 63 (513)
++.+|-+++|......+.. ...+-+++.++|+++.+..+
T Consensus 2 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 41 (330)
T 3uug_A 2 DKGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYA 41 (330)
T ss_dssp CCCEEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCcEEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEEEeeC
Confidence 4567877778765554444 34566777788999887663
No 158
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=27.38 E-value=1.5e+02 Score=26.86 Aligned_cols=37 Identities=14% Similarity=-0.053 Sum_probs=24.4
Q ss_pred ceEeEEcCCCCCChH-HHHHHHHHHHHhCCCcEEEEEe
Q psy14941 27 SKILAIFPTPAKSHQ-IIFDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~-~~~~~la~~L~~rGH~Vt~~~~ 63 (513)
.+|-+++|......+ .....+.+++.++|+++.+..+
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 40 (313)
T 3m9w_A 3 VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA 40 (313)
T ss_dssp CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECC
Confidence 466667776543333 3455677778889999887654
No 159
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=27.38 E-value=82 Score=18.08 Aligned_cols=28 Identities=7% Similarity=0.201 Sum_probs=22.0
Q ss_pred HHHHHHHHHhc--CHHHHHHHHHHHHHHhc
Q psy14941 414 ETVSDALKIVL--SPEYKENAEDLGTRFRD 441 (513)
Q Consensus 414 ~~l~~ai~~ll--~~~y~~~a~~~~~~~~~ 441 (513)
.+|.+.+.+++ +....+.+.++++++..
T Consensus 4 nQLEdKVEeLl~~~~~Le~EV~RLk~ll~~ 33 (34)
T 3c3f_A 4 XQIEXKLEXILSXLYHXENEXARIXKLLXE 33 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHhc
Confidence 46788899998 77888888888887753
No 160
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=27.32 E-value=88 Score=27.79 Aligned_cols=39 Identities=15% Similarity=0.229 Sum_probs=32.4
Q ss_pred eEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecC
Q psy14941 28 KILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPE 66 (513)
Q Consensus 28 kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~ 66 (513)
|++.+..-+|-|=..-...||..|+++|++|.++-.++.
T Consensus 2 ~vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D~q 40 (269)
T 1cp2_A 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK 40 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred cEEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCCCC
Confidence 455566777889999999999999999999998877653
No 161
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=27.14 E-value=40 Score=29.40 Aligned_cols=39 Identities=13% Similarity=0.136 Sum_probs=33.5
Q ss_pred cCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEee
Q psy14941 25 QCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
...||| +.+.++-.|-.-..-++..|..+|++|..+...
T Consensus 91 ~~~~vl-l~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 91 EAGLAI-TFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp -CCEEE-EEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCeEE-EEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 357888 667788999999999999999999999988763
No 162
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=27.13 E-value=86 Score=25.56 Aligned_cols=35 Identities=11% Similarity=0.106 Sum_probs=25.3
Q ss_pred eEeEEcCCCCCChH-HHHHHHHHHHHhCCCcEEEEEe
Q psy14941 28 KILAIFPTPAKSHQ-IIFDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 28 kIL~~~p~~~~gH~-~~~~~la~~L~~rGH~Vt~~~~ 63 (513)
||++++.++. |+. .....+++.|.+.|++|.++..
T Consensus 2 kv~IvY~S~t-GnT~~~A~~ia~~l~~~g~~v~~~~~ 37 (161)
T 3hly_A 2 SVLIGYLSDY-GYSDRLSQAIGRGLVKTGVAVEMVDL 37 (161)
T ss_dssp CEEEEECTTS-TTHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred EEEEEEECCC-hHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 6776666654 555 4566788889899999887754
No 163
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=27.05 E-value=1.1e+02 Score=27.52 Aligned_cols=39 Identities=3% Similarity=-0.243 Sum_probs=25.3
Q ss_pred ccCceEeEEcCCCCCChHHHH-HHHHHHHHhCCCcEEEEE
Q psy14941 24 QQCSKILAIFPTPAKSHQIIF-DTILVELYQRGHDLTVIT 62 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~gH~~~~-~~la~~L~~rGH~Vt~~~ 62 (513)
+.+.+|.++.+..+...+..+ ..+-+++.++|+++.+..
T Consensus 2 s~~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 41 (305)
T 3g1w_A 2 SLNETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRG 41 (305)
T ss_dssp ---CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeC
Confidence 356788878877665555444 456667778899988754
No 164
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=26.71 E-value=65 Score=27.17 Aligned_cols=36 Identities=19% Similarity=0.155 Sum_probs=25.9
Q ss_pred ceEeEEcCCCCCChHHH-HHHHHHHHHhCCCcEEEEEe
Q psy14941 27 SKILAIFPTPAKSHQII-FDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~-~~~la~~L~~rGH~Vt~~~~ 63 (513)
.|||+++.++ .|+..- ...+++.|.+.|++|.++..
T Consensus 6 ~kilii~~S~-~g~T~~la~~i~~~l~~~g~~v~~~~l 42 (200)
T 2a5l_A 6 PYILVLYYSR-HGATAEMARQIARGVEQGGFEARVRTV 42 (200)
T ss_dssp CEEEEEECCS-SSHHHHHHHHHHHHHHHTTCEEEEEBC
T ss_pred ceEEEEEeCC-CChHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 3898887776 576553 45567777778999987754
No 165
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=26.40 E-value=52 Score=26.16 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=24.0
Q ss_pred eEeEEcCCCCCChHH-HHHHHHHHHHhCCCcEEEEEee
Q psy14941 28 KILAIFPTPAKSHQI-IFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 28 kIL~~~p~~~~gH~~-~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
||++++.+. .|+.. ....+++.|.++|++|.++...
T Consensus 2 ki~iiy~S~-~Gnt~~~a~~i~~~l~~~g~~v~~~~~~ 38 (147)
T 1f4p_A 2 KALIVYGST-TGNTEYTAETIARELADAGYEVDSRDAA 38 (147)
T ss_dssp EEEEEEECS-SSHHHHHHHHHHHHHHHHTCEEEEEEGG
T ss_pred eEEEEEECC-cCHHHHHHHHHHHHHHhcCCeeEEEehh
Confidence 677666655 36543 4455667777789999877653
No 166
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=25.75 E-value=38 Score=27.35 Aligned_cols=33 Identities=24% Similarity=0.378 Sum_probs=24.8
Q ss_pred CceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEee
Q psy14941 26 CSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 26 ~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
..||+ ++. .|++- ..+++.|.++||+|+++...
T Consensus 3 ~~~vl-I~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFI-VCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEE-EEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEE-EEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 45777 443 36554 78999999999999999864
No 167
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=25.69 E-value=1.8e+02 Score=25.73 Aligned_cols=34 Identities=15% Similarity=0.115 Sum_probs=22.2
Q ss_pred CCCccEEEEccch-hchHHhhhhccCCCEEEEeCC
Q psy14941 130 ENKYDLIITEMFL-TDAFLVIPYLYKVPYISIASS 163 (513)
Q Consensus 130 ~~~~Dlvi~d~~~-~~~~~~~a~~l~iP~i~~~~~ 163 (513)
..++|.+|.-... ....+..+...|+|+|.+...
T Consensus 67 ~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~~~~~ 101 (292)
T 3k4h_A 67 GRQIGGIILLYSRENDRIIQYLHEQNFPFVLIGKP 101 (292)
T ss_dssp TTCCCEEEESCCBTTCHHHHHHHHTTCCEEEESCC
T ss_pred cCCCCEEEEeCCCCChHHHHHHHHCCCCEEEECCC
Confidence 5689998875432 222334556779999988654
No 168
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=25.68 E-value=2.9e+02 Score=24.63 Aligned_cols=39 Identities=13% Similarity=0.112 Sum_probs=23.7
Q ss_pred cCceEeEEcCCCCCChH-HHHHHHHHHHHhCCCcEEEEEe
Q psy14941 25 QCSKILAIFPTPAKSHQ-IIFDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~-~~~~~la~~L~~rGH~Vt~~~~ 63 (513)
.+..|.+++|......+ .....+.+++.++|+++.+...
T Consensus 14 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 53 (303)
T 3kke_A 14 RSGTIGLIVPDVNNAVFADMFSGVQMAASGHSTDVLLGQI 53 (303)
T ss_dssp ---CEEEEESCTTSTTHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCEEEEEeCCCcChHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 44567767776544333 3455677778888999877654
No 169
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=25.57 E-value=1.1e+02 Score=25.35 Aligned_cols=39 Identities=3% Similarity=0.123 Sum_probs=32.4
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
.+++.+....+.|=..-+..|+++|.++|.+|.++....
T Consensus 4 ~~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 4 MNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 456667777788999999999999999999999888643
No 170
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=25.49 E-value=75 Score=30.07 Aligned_cols=42 Identities=12% Similarity=0.110 Sum_probs=36.4
Q ss_pred cCceEeEEcCCCCCChHHHHHHHHHHHH--hCCCcEEEEEeecC
Q psy14941 25 QCSKILAIFPTPAKSHQIIFDTILVELY--QRGHDLTVITQYPE 66 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~~~~la~~L~--~rGH~Vt~~~~~~~ 66 (513)
.+.+|+++..-+|-|=......+|..|+ ++|++|.++..+..
T Consensus 16 ~~~~i~v~sgKGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~~ 59 (354)
T 2woj_A 16 TTHKWIFVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPA 59 (354)
T ss_dssp SSCCEEEEEESTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 3467887777888999999999999999 99999999998763
No 171
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=25.32 E-value=86 Score=17.98 Aligned_cols=27 Identities=7% Similarity=0.121 Sum_probs=22.0
Q ss_pred HHHHHHHHhc--CHHHHHHHHHHHHHHhc
Q psy14941 415 TVSDALKIVL--SPEYKENAEDLGTRFRD 441 (513)
Q Consensus 415 ~l~~ai~~ll--~~~y~~~a~~~~~~~~~ 441 (513)
+|.+.+.+++ |....+...++.+++..
T Consensus 4 QLE~kVEeLl~~n~~Le~EV~RLk~Ll~~ 32 (33)
T 3m48_A 4 QLEAKVEELLSKNWNLENEVARLKKLVGE 32 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Confidence 5778888888 78888888888887754
No 172
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=25.27 E-value=87 Score=28.85 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=29.2
Q ss_pred CceEeEEcCCCCCCh---HHHHHHHHHHHHhCCCcEEEEEe
Q psy14941 26 CSKILAIFPTPAKSH---QIIFDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 26 ~~kIL~~~p~~~~gH---~~~~~~la~~L~~rGH~Vt~~~~ 63 (513)
..||++++...+.=| +.....++++|.++||+|..+.+
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~ 53 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDP 53 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeC
Confidence 368887766555445 34788999999999999998874
No 173
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=25.09 E-value=79 Score=18.23 Aligned_cols=28 Identities=11% Similarity=0.219 Sum_probs=21.2
Q ss_pred HHHHHHHHHhc--CHHHHHHHHHHHHHHhc
Q psy14941 414 ETVSDALKIVL--SPEYKENAEDLGTRFRD 441 (513)
Q Consensus 414 ~~l~~ai~~ll--~~~y~~~a~~~~~~~~~ 441 (513)
.+|.+.+.+++ +....+...++++++..
T Consensus 4 nQLEdKvEeLl~~~~~L~~EV~RLk~lL~~ 33 (34)
T 2bni_A 4 KQIEDKLEEILSKGHHICNELARIKKLLGE 33 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred hHHHHHHHHHHHccHHHHHHHHHHHHHhcc
Confidence 46788899998 77888888888887643
No 174
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=25.05 E-value=44 Score=30.07 Aligned_cols=27 Identities=4% Similarity=-0.058 Sum_probs=20.3
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEEEE
Q psy14941 35 TPAKSHQIIFDTILVELYQRGHDLTVI 61 (513)
Q Consensus 35 ~~~~gH~~~~~~la~~L~~rGH~Vt~~ 61 (513)
++..|+..-+..+++.|+++|++|..+
T Consensus 58 HG~~~s~~~~~~la~~La~~Gy~Via~ 84 (281)
T 4fbl_A 58 HGFTGSPQSMRFLAEGFARAGYTVATP 84 (281)
T ss_dssp CCTTCCGGGGHHHHHHHHHTTCEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 344456566788999999999997644
No 175
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=24.84 E-value=96 Score=17.88 Aligned_cols=28 Identities=7% Similarity=0.113 Sum_probs=22.3
Q ss_pred HHHHHHHHHhc--CHHHHHHHHHHHHHHhc
Q psy14941 414 ETVSDALKIVL--SPEYKENAEDLGTRFRD 441 (513)
Q Consensus 414 ~~l~~ai~~ll--~~~y~~~a~~~~~~~~~ 441 (513)
.+|.+.+.+++ |....+...++.+++..
T Consensus 4 ~QLEdKVEeLl~~n~~Le~EV~RLk~LL~~ 33 (34)
T 1uo4_A 4 KQIEDKGEEILSKLYHIENELARIKKLLGE 33 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHcc
Confidence 46788888998 77888888888887753
No 176
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=24.78 E-value=97 Score=26.80 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=30.2
Q ss_pred EeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 29 ILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 29 IL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
|.+..+-+|-|=..-...||..|+++|++|.++-.+.
T Consensus 5 i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 5 ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 4444556678999999999999999999999887654
No 177
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=24.60 E-value=51 Score=28.90 Aligned_cols=43 Identities=23% Similarity=0.292 Sum_probs=27.0
Q ss_pred HHHHhcc-CCCccEEEEccchhch--HHhhhhcc----CCCEEEEeCCCC
Q psy14941 123 MKSIWNM-ENKYDLIITEMFLTDA--FLVIPYLY----KVPYISIASSTL 165 (513)
Q Consensus 123 l~~~l~~-~~~~Dlvi~d~~~~~~--~~~~a~~l----~iP~i~~~~~~~ 165 (513)
+.+.++. ..+||++++|...... .+++|.++ ++|+|.+.-...
T Consensus 93 ~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~~l 142 (225)
T 2w36_A 93 FLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKSRL 142 (225)
T ss_dssp HHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESSCS
T ss_pred HHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEeccc
Confidence 3444432 3579999999864431 22455554 799999886544
No 178
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=24.46 E-value=1.3e+02 Score=29.68 Aligned_cols=34 Identities=15% Similarity=0.363 Sum_probs=25.7
Q ss_pred HHHHhccCCCccEEEEccchhchHHhhhhccCCCEEEEe
Q psy14941 123 MKSIWNMENKYDLIITEMFLTDAFLVIPYLYKVPYISIA 161 (513)
Q Consensus 123 l~~~l~~~~~~Dlvi~d~~~~~~~~~~a~~l~iP~i~~~ 161 (513)
+.+.++ +.++|++|.+.. .. .+|+++|||++.+.
T Consensus 377 l~~~i~-~~~pDl~ig~~~---~~-~~a~k~gip~~~~~ 410 (458)
T 1mio_B 377 VHQWIK-NEGVDLLISNTY---GK-FIAREENIPFVRFG 410 (458)
T ss_dssp HHHHHH-HSCCSEEEESGG---GH-HHHHHHTCCEEECS
T ss_pred HHHHHH-hcCCCEEEeCcc---hH-HHHHHcCCCEEEee
Confidence 455565 578999998865 34 38999999998764
No 179
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=24.34 E-value=97 Score=26.53 Aligned_cols=34 Identities=6% Similarity=-0.069 Sum_probs=28.1
Q ss_pred EeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEE
Q psy14941 29 ILAIFPTPAKSHQIIFDTILVELYQRGHDLTVIT 62 (513)
Q Consensus 29 IL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~ 62 (513)
|.+...-++-|=......||.+|+++|++|.++-
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~d 37 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEc
Confidence 4444445788999999999999999999999863
No 180
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=24.29 E-value=96 Score=28.12 Aligned_cols=38 Identities=16% Similarity=0.201 Sum_probs=27.0
Q ss_pred ceEeEEcCCCCCChHH---HHHHHHHHHHhCCCcEEEEEee
Q psy14941 27 SKILAIFPTPAKSHQI---IFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~---~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
.||+++....+.-|-. ....++++|.++||+|.++...
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 4788565433334444 4568999999999999888764
No 181
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=24.27 E-value=85 Score=27.19 Aligned_cols=36 Identities=22% Similarity=0.384 Sum_probs=24.6
Q ss_pred ccCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEee
Q psy14941 24 QQCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
..+.+|| +.. +.|. --..++++|+++||+|+.+.-.
T Consensus 19 l~~~~il-VtG--atG~--iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 19 FQGMRVL-VVG--ANGK--VARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp --CCEEE-EET--TTSH--HHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCeEE-EEC--CCCh--HHHHHHHHHHhCCCeEEEEECC
Confidence 4567787 433 3344 3568899999999999988754
No 182
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=24.24 E-value=1.2e+02 Score=26.83 Aligned_cols=39 Identities=10% Similarity=0.063 Sum_probs=23.3
Q ss_pred cCceEeEEcCCCCCChHH-HHHHHHHHHHhCCCcEEEEEe
Q psy14941 25 QCSKILAIFPTPAKSHQI-IFDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~-~~~~la~~L~~rGH~Vt~~~~ 63 (513)
...+|.+++|......+. ....+.+++.++|+++.+...
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~ 46 (277)
T 3e61_A 7 KSKLIGLLLPDMSNPFFTLIARGVEDVALAHGYQVLIGNS 46 (277)
T ss_dssp ---CEEEEESCTTSHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 446677677765433333 345666778888999887554
No 183
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=24.19 E-value=1.5e+02 Score=30.05 Aligned_cols=28 Identities=18% Similarity=0.344 Sum_probs=21.0
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeE
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRV 324 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (513)
.+.++++-+|+.. .+.+..++++++...
T Consensus 7 ~~~IlilD~Gs~~---------~~~I~r~lre~Gv~~ 34 (556)
T 3uow_A 7 YDKILVLNFGSQY---------FHLIVKRLNNIKIFS 34 (556)
T ss_dssp CCEEEEEESSCTT---------HHHHHHHHHHTTCCE
T ss_pred CCEEEEEECCCcc---------HHHHHHHHHHCCCeE
Confidence 4678999999875 467788888887643
No 184
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=24.14 E-value=31 Score=29.90 Aligned_cols=42 Identities=12% Similarity=0.196 Sum_probs=29.6
Q ss_pred ccCceEeEEcCCCCCChHHHHHHHHHHHHh-CCCcEEEEEeecCC
Q psy14941 24 QQCSKILAIFPTPAKSHQIIFDTILVELYQ-RGHDLTVITQYPET 67 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~gH~~~~~~la~~L~~-rGH~Vt~~~~~~~~ 67 (513)
....||++.++ |.+...-...++++|.+ +|++|.++.+....
T Consensus 17 l~~k~IllgvT--Gsiaa~k~~~lv~~L~~~~g~~V~vv~T~~A~ 59 (206)
T 1qzu_A 17 ERKFHVLVGVT--GSVAALKLPLLVSKLLDIPGLEVAVVTTERAK 59 (206)
T ss_dssp CSSEEEEEEEC--SSGGGGTHHHHHHHHC---CEEEEEEECTGGG
T ss_pred cCCCEEEEEEe--ChHHHHHHHHHHHHHhcccCCEEEEEECHhHH
Confidence 45678884444 33556667999999999 89999999886543
No 185
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=23.97 E-value=1.1e+02 Score=24.23 Aligned_cols=35 Identities=11% Similarity=0.151 Sum_probs=24.7
Q ss_pred eEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEE
Q psy14941 28 KILAIFPTPAKSHQIIFDTILVELYQRGHDLTVIT 62 (513)
Q Consensus 28 kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~ 62 (513)
||++++.+....=-.....|++.|.++|++|.++.
T Consensus 3 ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 3 DITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp SEEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred eEEEEEECCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 67766665543334566788899999999988764
No 186
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=23.88 E-value=2.4e+02 Score=25.12 Aligned_cols=40 Identities=28% Similarity=0.331 Sum_probs=25.2
Q ss_pred cCceEeEEcC----CCCCCh-HHHHHHHHHHHHhCCCcEEEEEee
Q psy14941 25 QCSKILAIFP----TPAKSH-QIIFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 25 ~~~kIL~~~p----~~~~gH-~~~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
.+..|-+++| ...... ......+.+++.++|+++.+....
T Consensus 5 ~s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 49 (294)
T 3qk7_A 5 RTDAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGLDLLLIPDE 49 (294)
T ss_dssp CCCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ccceEEEEecCCCccccChhHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4456776776 222222 224556777888899998887764
No 187
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=23.79 E-value=2.4e+02 Score=21.38 Aligned_cols=52 Identities=8% Similarity=-0.047 Sum_probs=31.3
Q ss_pred cCcceEeeccccCcHHHHHHHHHcCc-EEEeccCCCCHHHHHHHHHHhc-CHHHHH
Q psy14941 377 EGIPVLGIPVFGDQWANIKKLESLKA-GKLLPYLEITEETVSDALKIVL-SPEYKE 430 (513)
Q Consensus 377 ~GvP~i~~P~~~DQ~~na~~~~~~G~-G~~l~~~~~~~~~l~~ai~~ll-~~~y~~ 430 (513)
...|+|++--..|...-...+...|+ +.... .++.++|.++|++++ ......
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~ga~~~l~K--P~~~~~L~~~i~~~~~~~~~~~ 124 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDAGIHQFLTK--PWHPEQLLSSARNAARMFTLAR 124 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHTTCCEEEES--SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhhchhhhccC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 35677776444444333333344455 44443 778999999999988 444333
No 188
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=23.48 E-value=1.5e+02 Score=26.25 Aligned_cols=39 Identities=8% Similarity=0.103 Sum_probs=25.9
Q ss_pred cCceEeEEcCCCCCChHH-HHHHHHHHHHhCCCcEEEEEe
Q psy14941 25 QCSKILAIFPTPAKSHQI-IFDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~-~~~~la~~L~~rGH~Vt~~~~ 63 (513)
.+.+|-+++|......+. ....+.+++.++|+++.+...
T Consensus 4 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 43 (291)
T 3l49_A 4 EGKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDA 43 (291)
T ss_dssp TTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcC
Confidence 456787777765432222 456777888889999887654
No 189
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=23.46 E-value=2.7e+02 Score=21.90 Aligned_cols=116 Identities=7% Similarity=-0.024 Sum_probs=63.2
Q ss_pred cHHHHHHhhcCCCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCC-CCCCCCCCcEEEecCCCcccccc
Q psy14941 277 NEEMERFLNESHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDND-TSIFKPYKNIRTSSWMPQRDIFA 355 (513)
Q Consensus 277 ~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~nv~~~~~~pq~~lL~ 355 (513)
++++.+++++ .+.+.+|..+.. +...-..++..+.+.+++ +|-+.+.. ..+ -.++...+-+. ++-.
T Consensus 3 ~~~l~~ll~~-p~~vaVvGas~~------~g~~G~~~~~~l~~~G~~-v~~vnp~~~~~~---i~G~~~~~sl~--el~~ 69 (140)
T 1iuk_A 3 DQELRAYLSQ-AKTIAVLGAHKD------PSRPAHYVPRYLREQGYR-VLPVNPRFQGEE---LFGEEAVASLL--DLKE 69 (140)
T ss_dssp HHHHHHHHHH-CCEEEEETCCSS------TTSHHHHHHHHHHHTTCE-EEEECGGGTTSE---ETTEECBSSGG--GCCS
T ss_pred HHHHHHHHcC-CCEEEEECCCCC------CCChHHHHHHHHHHCCCE-EEEeCCCcccCc---CCCEEecCCHH--HCCC
Confidence 4668888843 567877755332 223334555556666777 66555431 111 12222222211 1111
Q ss_pred CCCceEEeccCC----cccHHHHHHcCcceEeeccccCcHHHHHHHHHcCcEEEec
Q psy14941 356 HPNMKLFISHGG----LLGITEAVYEGIPVLGIPVFGDQWANIKKLESLKAGKLLP 407 (513)
Q Consensus 356 h~~~~~~IthgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~G~G~~l~ 407 (513)
.+|+.+.=-- ...+.|+...|+..+.+--...|..-++.+++.|+-+.-+
T Consensus 70 --~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g~~~~~~~~~a~~~Gir~vgp 123 (140)
T 1iuk_A 70 --PVDILDVFRPPSALMDHLPEVLALRPGLVWLQSGIRHPEFEKALKEAGIPVVAD 123 (140)
T ss_dssp --CCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTTCCCHHHHHHHHHTTCCEEES
T ss_pred --CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCCcCHHHHHHHHHHcCCEEEcC
Confidence 2232222111 2456788899999877655567888888888888876654
No 190
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=23.24 E-value=82 Score=26.90 Aligned_cols=37 Identities=8% Similarity=0.110 Sum_probs=26.9
Q ss_pred ceEeEEcCCCCCChHH-HHHHHHHHHHhCCCcEEEEEee
Q psy14941 27 SKILAIFPTPAKSHQI-IFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~-~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
.|||+++.++ .|+.. ....+++.|.+.|++|.++...
T Consensus 7 mkilii~~S~-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 44 (211)
T 1ydg_A 7 VKLAIVFYSS-TGTGYAMAQEAAEAGRAAGAEVRLLKVR 44 (211)
T ss_dssp CEEEEEECCS-SSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CeEEEEEECC-CChHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 5899888877 67655 3445667777789999887653
No 191
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=23.14 E-value=55 Score=25.72 Aligned_cols=35 Identities=11% Similarity=0.186 Sum_probs=23.5
Q ss_pred eEEcCCCCCChHH-HHHHHHHHHHhCCCcEEEEEeec
Q psy14941 30 LAIFPTPAKSHQI-IFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 30 L~~~p~~~~gH~~-~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
++++.+. .|+.. ....+++.|.++|++|.++....
T Consensus 2 ~I~Y~S~-tGnT~~iA~~ia~~l~~~g~~v~~~~~~~ 37 (138)
T 5nul_A 2 KIVYWSG-TGNTEKMAELIAKGIIESGKDVNTINVSD 37 (138)
T ss_dssp EEEEECS-SSHHHHHHHHHHHHHHHTTCCCEEEEGGG
T ss_pred EEEEECC-CchHHHHHHHHHHHHHHCCCeEEEEEhhh
Confidence 3344443 46664 44678888999999999876543
No 192
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=23.01 E-value=48 Score=30.79 Aligned_cols=42 Identities=12% Similarity=-0.020 Sum_probs=29.6
Q ss_pred hccCce-EeEEcCCCCCChH--------------HHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 23 IQQCSK-ILAIFPTPAKSHQ--------------IIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 23 ~~~~~k-IL~~~p~~~~gH~--------------~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
...+.| || +.++|..=.+ ..-.++|+++.+||++|++++.+.
T Consensus 33 ~l~gk~~VL-ITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 33 GAQGRRVVL-VTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHTTCCEEE-EEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred hhcCCeEEE-EeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 456677 55 6666552222 255678999999999999998743
No 193
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=22.98 E-value=85 Score=25.02 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=27.9
Q ss_pred CceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEee
Q psy14941 26 CSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 26 ~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
..+++ ++.. .+=+-|+++++++|.++|.+|+++ ..
T Consensus 18 ~~~~l-lIaG--G~GiaPl~sm~~~l~~~~~~v~l~-g~ 52 (142)
T 3lyu_A 18 FGKIL-AIGA--YTGIVEVYPIAKAWQEIGNDVTTL-HV 52 (142)
T ss_dssp CSEEE-EEEE--TTHHHHHHHHHHHHHHTTCEEEEE-EE
T ss_pred CCeEE-EEEC--cCcHHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 46777 4443 367999999999999999999998 53
No 194
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=22.96 E-value=64 Score=27.98 Aligned_cols=41 Identities=7% Similarity=0.112 Sum_probs=29.0
Q ss_pred ccCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCC
Q psy14941 24 QQCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPET 67 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~ 67 (513)
....||++.++ ++ +...-...+++.|.++| +|.++.+....
T Consensus 17 l~~k~IllgvT-Gs-iaa~k~~~ll~~L~~~g-~V~vv~T~~A~ 57 (209)
T 1mvl_A 17 PRKPRVLLAAS-GS-VAAIKFGNLCHCFTEWA-EVRAVVTKSSL 57 (209)
T ss_dssp --CCEEEEEEC-SS-GGGGGHHHHHHHHHTTS-EEEEEECTGGG
T ss_pred cCCCEEEEEEe-Cc-HHHHHHHHHHHHHhcCC-CEEEEEcchHH
Confidence 34678885544 34 34455899999999999 99999886543
No 195
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=22.82 E-value=97 Score=31.61 Aligned_cols=41 Identities=12% Similarity=0.148 Sum_probs=36.5
Q ss_pred cCceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 25 QCSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 25 ~~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
...+|+++...+|-|=......+|..|+++|++|.++..++
T Consensus 6 ~~~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~ 46 (589)
T 1ihu_A 6 NIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (589)
T ss_dssp SCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 45678878888889999999999999999999999999875
No 196
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=22.79 E-value=1.1e+02 Score=26.91 Aligned_cols=37 Identities=19% Similarity=0.091 Sum_probs=30.3
Q ss_pred EeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 29 ILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 29 IL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
|.+..+-+|-|=......||..|+++|++|.++-.++
T Consensus 5 i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 5 IVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4444566678999999999999999999998887654
No 197
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=22.70 E-value=1.6e+02 Score=29.52 Aligned_cols=28 Identities=11% Similarity=0.223 Sum_probs=19.8
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeE
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRV 324 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (513)
.+.++.+-+|+.. .+.+...+++.+...
T Consensus 10 ~~~I~IlD~g~~~---------~~~i~r~lr~~Gv~~ 37 (527)
T 3tqi_A 10 QHRILILDFGSQY---------AQLIARRVREIGVYC 37 (527)
T ss_dssp CSEEEEEECSCTT---------HHHHHHHHHHHTCEE
T ss_pred CCeEEEEECCCcc---------HHHHHHHHHHCCCeE
Confidence 3578999999875 256677777777643
No 198
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=22.54 E-value=2.2e+02 Score=24.26 Aligned_cols=97 Identities=12% Similarity=0.111 Sum_probs=53.5
Q ss_pred HHHHHHhhcCCCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcC----CCCCCCCCCCcEEEecCCCcc-c
Q psy14941 278 EEMERFLNESHNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFED----NDTSIFKPYKNIRTSSWMPQR-D 352 (513)
Q Consensus 278 ~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~~~~~~~nv~~~~~~pq~-~ 352 (513)
.++-+++.+ ++..+|+-|... .......++..+.+-+++=.... .+.++-- -+...+++.+... .
T Consensus 43 ~~lg~~La~--~g~~lV~GGG~~-------GlM~a~~~gA~~~GG~viGv~p~~l~~~e~~~~~-~~~~i~~~~~~~Rk~ 112 (199)
T 3qua_A 43 AEVGSSIAA--RGWTLVSGGGNV-------SAMGAVAQAARAKGGHTVGVIPKALVHRELADVD-AAELIVTDTMRERKR 112 (199)
T ss_dssp HHHHHHHHH--TTCEEEECCBCS-------HHHHHHHHHHHHTTCCEEEEEEGGGTTTTTBCTT-SSEEEEESSHHHHHH
T ss_pred HHHHHHHHH--CCCEEEECCCcc-------CHHHHHHHHHHHcCCcEEEEeCchhhhccccCCC-CCeeEEcCCHHHHHH
Confidence 445556664 466667755432 45667777766666555444433 1222101 2445555655433 3
Q ss_pred cccCCCce-EEeccCCcccHHHHHH---------cCcceEeec
Q psy14941 353 IFAHPNMK-LFISHGGLLGITEAVY---------EGIPVLGIP 385 (513)
Q Consensus 353 lL~h~~~~-~~IthgG~~s~~Eal~---------~GvP~i~~P 385 (513)
++. ..++ .++--||.||+-|... +++|++.+-
T Consensus 113 ~m~-~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln 154 (199)
T 3qua_A 113 EME-HRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLD 154 (199)
T ss_dssp HHH-HHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred HHH-HhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEc
Confidence 333 3344 4456677888877643 689999884
No 199
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=22.01 E-value=98 Score=28.50 Aligned_cols=38 Identities=16% Similarity=0.315 Sum_probs=28.0
Q ss_pred CceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEee
Q psy14941 26 CSKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 26 ~~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
+.+||++.++|- ==...+-.....++++|++|++++-.
T Consensus 4 ~~~vL~v~AHPD-De~l~~ggtla~~~~~G~~V~vv~lT 41 (303)
T 1q74_A 4 TPRLLFVHAHPD-DESLSNGATIAHYTSRGAQVHVVTCT 41 (303)
T ss_dssp CCEEEEEESSTT-HHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCeEEEEEeCCc-hHHHhHHHHHHHHHHCCCcEEEEEEc
Confidence 578999999985 22334556667777889999998764
No 200
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=21.77 E-value=1.2e+02 Score=29.71 Aligned_cols=41 Identities=12% Similarity=0.131 Sum_probs=35.0
Q ss_pred ceEeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeecCC
Q psy14941 27 SKILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYPET 67 (513)
Q Consensus 27 ~kIL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~~~ 67 (513)
.++++++..+|.|=..-+..||..|+++|++|.++..+..+
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 45665778889999999999999999999999999876643
No 201
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=21.70 E-value=36 Score=26.64 Aligned_cols=40 Identities=18% Similarity=0.372 Sum_probs=25.5
Q ss_pred hHHHHhccCCCccEEEEccchh--chHHhhhhc---cCCCEEEEeCC
Q psy14941 122 NMKSIWNMENKYDLIITEMFLT--DAFLVIPYL---YKVPYISIASS 163 (513)
Q Consensus 122 ~l~~~l~~~~~~Dlvi~d~~~~--~~~~~~a~~---l~iP~i~~~~~ 163 (513)
+..+.++ +.+||+||.|...+ .+. .+++. .++|+|.++..
T Consensus 44 eAl~~~~-~~~~DlvllDi~mP~~~G~-el~~~lr~~~ipvI~lTa~ 88 (123)
T 2lpm_A 44 EALDIAR-KGQFDIAIIDVNLDGEPSY-PVADILAERNVPFIFATGY 88 (123)
T ss_dssp HHHHHHH-HCCSSEEEECSSSSSCCSH-HHHHHHHHTCCSSCCBCTT
T ss_pred HHHHHHH-hCCCCEEEEecCCCCCCHH-HHHHHHHcCCCCEEEEecC
Confidence 3445565 57899999998755 222 34443 47997766543
No 202
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=21.46 E-value=1.2e+02 Score=26.64 Aligned_cols=23 Identities=17% Similarity=0.170 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhCCCcEEEEEee
Q psy14941 42 IIFDTILVELYQRGHDLTVITQY 64 (513)
Q Consensus 42 ~~~~~la~~L~~rGH~Vt~~~~~ 64 (513)
.--.++|++|+++|++|+++...
T Consensus 35 ~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 35 KMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHCCCEEEEEECC
Confidence 34578999999999999998653
No 203
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=21.40 E-value=1.2e+02 Score=26.88 Aligned_cols=37 Identities=24% Similarity=0.231 Sum_probs=30.4
Q ss_pred EeEEcCCCCCChHHHHHHHHHHHHhCCCcEEEEEeec
Q psy14941 29 ILAIFPTPAKSHQIIFDTILVELYQRGHDLTVITQYP 65 (513)
Q Consensus 29 IL~~~p~~~~gH~~~~~~la~~L~~rGH~Vt~~~~~~ 65 (513)
|.+..+-+|-|=..-...||..|+++|++|.++-.+.
T Consensus 5 I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 5 ITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp EEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4444566778999999999999999999999886644
No 204
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=21.28 E-value=1.1e+02 Score=25.00 Aligned_cols=29 Identities=41% Similarity=0.692 Sum_probs=23.4
Q ss_pred eEEEEeCcccccCCCCHHHHHHHHHHHhcCCC
Q psy14941 291 VIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQ 322 (513)
Q Consensus 291 ~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~ 322 (513)
.+|+++||.. ..+...++..++++++.+.
T Consensus 2 ~~~i~LGSNl---Gd~~~~l~~A~~~L~~~~~ 30 (158)
T 1f9y_A 2 VAYIAIGSNL---ASPLEQVNAALKALGDIPE 30 (158)
T ss_dssp EEEEEEEECS---SCHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEecCc---cCHHHHHHHHHHHHhcCCC
Confidence 5899999997 3467788888888888765
No 205
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=21.04 E-value=80 Score=26.18 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=31.0
Q ss_pred ccCceEeEEcCCCCC---ChHHHHHHHHHHHHhCCCcEEEEEeecC
Q psy14941 24 QQCSKILAIFPTPAK---SHQIIFDTILVELYQRGHDLTVITQYPE 66 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~---gH~~~~~~la~~L~~rGH~Vt~~~~~~~ 66 (513)
..+.+|+ ++|.-|. --..+...|++.|.++|-+|.|...+-.
T Consensus 28 ~~A~~Vi-IVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 72 (186)
T 2bru_C 28 KNSHSVI-ITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVA 72 (186)
T ss_dssp HHCSEEE-EECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSSS
T ss_pred HhCCeEE-EECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 4567887 6664321 2245889999999999999999987543
No 206
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=20.90 E-value=1.6e+02 Score=24.23 Aligned_cols=29 Identities=28% Similarity=0.599 Sum_probs=24.4
Q ss_pred eEEEEeCcccccCCCCHHHHHHHHHHHhcCCC
Q psy14941 291 VIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQ 322 (513)
Q Consensus 291 ~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~ 322 (513)
.+|+++||.. ..+.+.++..++.+++.+.
T Consensus 3 ~~~i~LGSNl---Gd~~~~l~~A~~~L~~~~~ 31 (159)
T 2qx0_A 3 RVYIALGSNL---AMPLQQVSAAREALAHLPR 31 (159)
T ss_dssp EEEEEEEECS---SSCHHHHHHHHHHHHTCTT
T ss_pred EEEEEEeCch---hhHHHHHHHHHHHHhcCCC
Confidence 4899999997 4678889999999988765
No 207
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=20.80 E-value=2.9e+02 Score=21.27 Aligned_cols=51 Identities=8% Similarity=-0.084 Sum_probs=32.6
Q ss_pred cCcceEeeccccCcHHHHHHHHHcC-c-EEEeccCCCCHHHHHHHHHHhc-CHHHHH
Q psy14941 377 EGIPVLGIPVFGDQWANIKKLESLK-A-GKLLPYLEITEETVSDALKIVL-SPEYKE 430 (513)
Q Consensus 377 ~GvP~i~~P~~~DQ~~na~~~~~~G-~-G~~l~~~~~~~~~l~~ai~~ll-~~~y~~ 430 (513)
..+|+|++--..|. .....+.+.| + +.... .++.++|.++|++++ ...+..
T Consensus 75 ~~~~ii~~s~~~~~-~~~~~~~~~g~~~~~l~K--P~~~~~L~~~i~~~l~~~~~~~ 128 (151)
T 3kcn_A 75 PNSVYLMLTGNQDL-TTAMEAVNEGQVFRFLNK--PCQMSDIKAAINAGIKQYDLVT 128 (151)
T ss_dssp SSCEEEEEECGGGH-HHHHHHHHHTCCSEEEES--SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCH-HHHHHHHHcCCeeEEEcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 46777776443333 3344555566 5 55544 779999999999999 554443
No 208
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=20.72 E-value=72 Score=26.44 Aligned_cols=42 Identities=14% Similarity=0.171 Sum_probs=30.7
Q ss_pred ccCceEeEEcCCCCC---ChHHHHHHHHHHHHhCCCcEEEEEeecC
Q psy14941 24 QQCSKILAIFPTPAK---SHQIIFDTILVELYQRGHDLTVITQYPE 66 (513)
Q Consensus 24 ~~~~kIL~~~p~~~~---gH~~~~~~la~~L~~rGH~Vt~~~~~~~ 66 (513)
..+.+|+ ++|.-|. --..+...|++.|.++|-+|.|...+-.
T Consensus 20 ~~A~~Vi-IvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVA 64 (184)
T 1d4o_A 20 REANSII-ITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPVA 64 (184)
T ss_dssp HHCSEEE-EEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred HhCCeEE-EECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 3567887 6664321 2245889999999999999999987543
No 209
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=20.62 E-value=54 Score=28.65 Aligned_cols=21 Identities=14% Similarity=0.139 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhCCCcEEEEEe
Q psy14941 43 IFDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 43 ~~~~la~~L~~rGH~Vt~~~~ 63 (513)
.-+.+|..|+++|++|+++=-
T Consensus 13 aGL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 13 AGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp HHHHHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHHHCCCCEEEEEC
Confidence 347889999999999999853
No 210
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=20.56 E-value=3.8e+02 Score=22.45 Aligned_cols=140 Identities=11% Similarity=0.133 Sum_probs=78.6
Q ss_pred CCceEEEEeCcccccCCCCHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCcEEEecCCCccccccCCCceEEeccCC
Q psy14941 288 HNGVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQRVLWKFEDNDTSIFKPYKNIRTSSWMPQRDIFAHPNMKLFISHGG 367 (513)
Q Consensus 288 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~IthgG 367 (513)
.-|.|-|-+||.. ..+..+.....++.++..+-..+-+.. . . |+.+ ..+..+ .....++++|.=.|
T Consensus 12 ~~~~V~IimGS~S-----D~~v~~~a~~~L~~~Gi~~dv~V~SaH--R-~-p~~l--~~~~~~---a~~~g~~ViIa~AG 77 (183)
T 1o4v_A 12 HVPRVGIIMGSDS-----DLPVMKQAAEILEEFGIDYEITIVSAH--R-T-PDRM--FEYAKN---AEERGIEVIIAGAG 77 (183)
T ss_dssp --CEEEEEESCGG-----GHHHHHHHHHHHHHTTCEEEEEECCTT--T-C-HHHH--HHHHHH---TTTTTCCEEEEEEE
T ss_pred CCCeEEEEeccHH-----HHHHHHHHHHHHHHcCCCeEEEEEccc--C-C-HHHH--HHHHHH---HHhCCCcEEEEecC
Confidence 4578888899987 567788888999988876544443321 0 1 1111 111110 11245678888777
Q ss_pred cc----cHHHHHHcCcceEeecccc--CcHHHH-HHHHHc--CcEEE-ecc-CCCCHHHHHHHHHHhcCHHHHHHHHHHH
Q psy14941 368 LL----GITEAVYEGIPVLGIPVFG--DQWANI-KKLESL--KAGKL-LPY-LEITEETVSDALKIVLSPEYKENAEDLG 436 (513)
Q Consensus 368 ~~----s~~Eal~~GvP~i~~P~~~--DQ~~na-~~~~~~--G~G~~-l~~-~~~~~~~l~~ai~~ll~~~y~~~a~~~~ 436 (513)
.. ++.-++ .-+|+|++|... -.-..+ .-+.+. |+.+. +.. ...++.-+...|..+-|+..+++.+..+
T Consensus 78 ~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~Id~~~nAa~lAaqIla~~d~~l~~kL~~~r 156 (183)
T 1o4v_A 78 GAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINNAKNAGILAASILGIKYPEIARKVKEYK 156 (183)
T ss_dssp SSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCchHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 53 333333 679999999854 222233 234444 75432 222 2234444555444333888888888887
Q ss_pred HHHhcC
Q psy14941 437 TRFRDR 442 (513)
Q Consensus 437 ~~~~~~ 442 (513)
......
T Consensus 157 ~~~~~~ 162 (183)
T 1o4v_A 157 ERMKRE 162 (183)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776543
No 211
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=20.55 E-value=97 Score=25.94 Aligned_cols=36 Identities=14% Similarity=0.145 Sum_probs=25.2
Q ss_pred eEeEEcCCCCCChHHH-HHHHHHHHHh-CCCcEEEEEee
Q psy14941 28 KILAIFPTPAKSHQII-FDTILVELYQ-RGHDLTVITQY 64 (513)
Q Consensus 28 kIL~~~p~~~~gH~~~-~~~la~~L~~-rGH~Vt~~~~~ 64 (513)
|||+++.++ .|+..- ...+++.|.+ .|++|.++...
T Consensus 3 kilii~~S~-~g~t~~la~~i~~~l~~~~g~~v~~~~l~ 40 (198)
T 3b6i_A 3 KVLVLYYSM-YGHIETMARAVAEGASKVDGAEVVVKRVP 40 (198)
T ss_dssp EEEEEECCS-SSHHHHHHHHHHHHHHTSTTCEEEEEECC
T ss_pred eEEEEEeCC-CcHHHHHHHHHHHHHhhcCCCEEEEEEcc
Confidence 788777764 677654 4456667777 89999887653
No 212
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=20.48 E-value=1.3e+02 Score=27.90 Aligned_cols=107 Identities=11% Similarity=0.019 Sum_probs=53.3
Q ss_pred ceEEEEeCcccccCCCCHHHHHHHHHHHhcCCC-eEEEEEcCCCC--CCCCCCCcEEEecCCCccccccCCCceEEeccC
Q psy14941 290 GVIYFSMGSMLKTSSFPPDKFKAFLKAFSKIPQ-RVLWKFEDNDT--SIFKPYKNIRTSSWMPQRDIFAHPNMKLFISHG 366 (513)
Q Consensus 290 ~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~--~~~~~~~nv~~~~~~pq~~lL~h~~~~~~Ithg 366 (513)
++.++..|.++ ...+.++.+.+. +++..++.+.- ..+.+.-++ ...+-...+++..+.+++++.-.
T Consensus 7 ~igiiG~G~~g----------~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~~~D~V~i~t 75 (330)
T 3e9m_A 7 RYGIMSTAQIV----------PRFVAGLRESAQAEVRGIASRRLENAQKMAKELAI-PVAYGSYEELCKDETIDIIYIPT 75 (330)
T ss_dssp EEEECSCCTTH----------HHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTC-CCCBSSHHHHHHCTTCSEEEECC
T ss_pred EEEEECchHHH----------HHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCC-CceeCCHHHHhcCCCCCEEEEcC
Confidence 45666666665 235666666654 55555544320 000000011 01123445777777888877655
Q ss_pred Cccc----HHHHHHcCcceEe-eccccC--c-HHHHHHHHHcCcEEEec
Q psy14941 367 GLLG----ITEAVYEGIPVLG-IPVFGD--Q-WANIKKLESLKAGKLLP 407 (513)
Q Consensus 367 G~~s----~~Eal~~GvP~i~-~P~~~D--Q-~~na~~~~~~G~G~~l~ 407 (513)
-... +.+|+.+|+++++ -|+..+ + ..-...+++.|+-+.+.
T Consensus 76 p~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 124 (330)
T 3e9m_A 76 YNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEA 124 (330)
T ss_dssp CGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 4433 5667778888776 365432 2 12223344455544443
No 213
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=20.26 E-value=1.1e+02 Score=25.93 Aligned_cols=37 Identities=19% Similarity=0.319 Sum_probs=27.0
Q ss_pred ceEeEEcCCCC---CChHHHHH-HHHHHHHhCC--CcEEEEEe
Q psy14941 27 SKILAIFPTPA---KSHQIIFD-TILVELYQRG--HDLTVITQ 63 (513)
Q Consensus 27 ~kIL~~~p~~~---~gH~~~~~-~la~~L~~rG--H~Vt~~~~ 63 (513)
.|||++..++- .|+..-+. .+++.|.++| |+|.++-.
T Consensus 2 ~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL 44 (208)
T 2hpv_A 2 SKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDV 44 (208)
T ss_dssp CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEET
T ss_pred CeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeC
Confidence 38998988887 37766554 4677777777 99887754
No 214
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=20.04 E-value=1.3e+02 Score=26.25 Aligned_cols=37 Identities=11% Similarity=0.035 Sum_probs=28.4
Q ss_pred ceEeEEcCC-CCCChHHHHHHHHHHHHhCCCcEEEEEe
Q psy14941 27 SKILAIFPT-PAKSHQIIFDTILVELYQRGHDLTVITQ 63 (513)
Q Consensus 27 ~kIL~~~p~-~~~gH~~~~~~la~~L~~rGH~Vt~~~~ 63 (513)
.|.+++... ++-|=......|++.|+++|.+|.++-+
T Consensus 4 mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 4 MKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp CEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 344434443 5678999999999999999999998653
Done!