Query psy14943
Match_columns 328
No_of_seqs 231 out of 667
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 16:26:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14943.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14943hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xbr_A Protein (T protein); co 100.0 3E-76 1E-80 524.5 14.0 183 51-244 1-183 (184)
2 1h6f_A T-box transcription fac 100.0 3.3E-74 1.1E-78 515.1 12.5 184 48-242 1-189 (193)
3 2x6u_A T-box transcription fac 100.0 5.9E-74 2E-78 516.9 12.1 186 49-245 3-195 (203)
4 4a04_A T-box transcription fac 100.0 9.4E-73 3.2E-77 509.3 13.3 181 49-240 13-203 (203)
5 2x6u_A T-box transcription fac 99.8 2.6E-22 9E-27 180.5 1.9 69 253-328 62-130 (203)
6 1h6f_A T-box transcription fac 99.8 3.9E-22 1.3E-26 178.2 2.2 69 253-328 61-129 (193)
7 1xbr_A Protein (T protein); co 99.8 1E-21 3.5E-26 174.1 3.9 68 253-328 58-125 (184)
8 4a04_A T-box transcription fac 99.8 2.3E-21 7.7E-26 174.5 2.8 85 231-328 56-142 (203)
9 3s9d_B Interferon alpha/beta r 55.6 21 0.00072 31.0 6.1 61 49-109 112-184 (199)
10 2dkm_A Collagen alpha-1(XX) ch 49.1 13 0.00044 27.8 3.2 20 86-105 62-81 (104)
11 1j8k_A Fibronectin; EDA, TYPEI 48.3 14 0.00046 26.8 3.2 23 83-105 53-75 (94)
12 3b83_A Ten-D3; beta sheet, com 47.9 14 0.00049 27.3 3.3 24 83-106 53-76 (100)
13 3qht_C Monobody YSMB-1; fibron 47.8 12 0.00042 27.4 2.9 23 84-106 57-79 (97)
14 3t04_D Monobody 7C12; engineer 47.4 14 0.00047 27.7 3.2 22 84-105 63-84 (103)
15 3tes_A Tencon; fibronectin typ 47.3 13 0.00044 27.7 2.9 23 84-106 54-76 (98)
16 3k2m_C Monobody HA4; engineere 46.5 19 0.00065 26.7 3.8 26 84-109 59-84 (101)
17 2rb8_A Tenascin; beta sheet,lo 46.1 13 0.00046 27.7 2.9 23 84-106 55-77 (104)
18 2edd_A Netrin receptor DCC; tu 45.5 14 0.00048 28.7 3.0 22 84-105 77-98 (123)
19 2cui_A Tenascin-X; fibronectin 45.4 14 0.00047 28.7 2.9 21 86-106 71-91 (112)
20 3teu_A Fibcon; FN3 domain, fib 45.1 15 0.0005 26.9 2.9 23 84-106 54-76 (98)
21 2cuh_A Tenascin-X; fibronectin 44.7 14 0.00049 28.0 2.9 23 84-106 58-80 (115)
22 2djs_A Ephrin type-B receptor 44.6 15 0.00052 27.1 3.0 23 84-106 62-84 (108)
23 1x5j_A Neogenin; RGM binding, 42.9 12 0.0004 28.7 2.2 23 84-106 67-89 (113)
24 2e7h_A Ephrin type-B receptor 42.9 19 0.00063 26.8 3.3 21 85-105 64-84 (109)
25 2dn7_A Receptor-type tyrosine- 42.7 17 0.00058 26.6 3.0 22 85-106 62-83 (107)
26 1x4y_A Biregional cell adhesio 42.6 17 0.00059 27.2 3.1 22 84-105 68-89 (114)
27 2dle_A Receptor-type tyrosine- 42.6 17 0.0006 27.7 3.1 22 84-105 58-79 (104)
28 2h41_A Fibronectin; beta sandw 42.3 15 0.00053 27.8 2.7 23 84-106 58-80 (95)
29 2cum_A Tenascin-X; hexabrachio 41.6 17 0.0006 27.1 2.9 22 84-105 58-79 (105)
30 1va9_A DOWN syndrome cell adhe 40.9 22 0.00076 26.5 3.5 23 84-106 77-99 (122)
31 3qwq_B Adnectin; cell surface 40.6 18 0.00062 27.9 2.9 23 84-106 56-78 (114)
32 1x5z_A Receptor-type tyrosine- 39.6 17 0.00057 27.0 2.5 23 83-105 68-90 (115)
33 2edb_A Netrin receptor DCC; tu 38.9 21 0.00073 27.1 3.1 23 84-106 70-92 (116)
34 1uen_A KIAA0343 protein; immun 38.8 22 0.00074 26.8 3.1 24 83-106 78-101 (125)
35 2ocf_D Fibronectin; estrogen r 38.5 20 0.00068 27.9 2.9 22 84-105 81-102 (121)
36 1oww_A FN, fibronectin first t 38.3 17 0.00057 28.3 2.3 20 85-104 61-80 (98)
37 2ee2_A Contactin-1; neural cel 38.2 21 0.00072 26.9 2.9 22 84-105 73-94 (119)
38 1x5a_A Ephrin type-A receptor 38.1 20 0.00067 27.0 2.7 20 87-106 64-83 (107)
39 1uc6_A CNTF receptor, ciliary 38.1 22 0.00074 26.7 3.0 23 84-106 66-88 (109)
40 1x4x_A Fibronectin type-III do 38.0 23 0.00079 26.2 3.1 22 84-105 60-81 (106)
41 2haz_A N-CAM 1, neural cell ad 37.8 22 0.00075 26.3 2.9 23 83-105 64-86 (105)
42 2yrz_A Integrin beta-4; GP150, 37.6 23 0.00077 26.5 3.0 23 84-106 72-94 (118)
43 1x5g_A Neogenin; RGM binding, 37.5 22 0.00075 26.4 2.9 22 84-105 70-91 (116)
44 2dju_A Receptor-type tyrosine- 37.3 24 0.00081 25.6 3.0 22 84-105 60-81 (106)
45 1x5f_A Neogenin; RGM binding, 37.0 22 0.00077 26.5 2.9 23 84-106 74-96 (120)
46 2ed8_A Netrin receptor DCC; tu 36.1 21 0.00072 26.1 2.6 22 84-105 60-81 (106)
47 1x5x_A Fibronectin type-III do 35.7 25 0.00085 25.9 3.0 22 84-105 63-84 (109)
48 2dm4_A Sortilin-related recept 35.5 24 0.00083 26.0 2.9 23 84-106 62-84 (108)
49 1wfn_A Sidekick 2; FN3, cell a 35.3 26 0.00089 26.2 3.1 24 83-106 72-95 (119)
50 1wfo_A Sidekick 2; FN3, cell a 34.9 26 0.00088 26.7 3.0 23 84-106 84-106 (130)
51 1x5l_A Ephrin type-A receptor 34.1 22 0.00074 26.2 2.3 23 84-106 65-87 (111)
52 2ede_A Netrin receptor DCC; tu 33.9 27 0.00093 25.8 2.9 22 84-105 68-89 (114)
53 3n1f_C Cell adhesion molecule- 33.7 28 0.00095 25.9 2.9 22 84-105 64-85 (102)
54 2dmk_A Midline 2 isoform 2; mi 33.4 34 0.0012 26.4 3.5 24 83-106 78-101 (127)
55 2ee3_A Collagen alpha-1(XX) ch 33.3 25 0.00085 26.9 2.6 21 85-105 60-80 (108)
56 2edx_A Protein tyrosine phosph 33.2 30 0.001 26.2 3.1 24 83-106 77-100 (134)
57 2crm_A Fibronectin type-III do 33.1 33 0.0011 25.7 3.3 24 83-106 73-96 (120)
58 1x5i_A Neogenin; RGM binding, 31.8 21 0.00072 27.6 2.0 22 84-105 80-101 (126)
59 2ekj_A Collagen alpha-1(XX) ch 31.7 15 0.0005 27.5 1.0 22 84-105 60-81 (105)
60 2db8_A Tripartite motif protei 31.6 36 0.0012 25.5 3.3 23 83-105 63-85 (110)
61 1wf5_A Sidekick 2 protein; FNI 31.5 32 0.0011 25.6 3.0 23 83-105 74-96 (121)
62 2edy_A Receptor-type tyrosine- 31.5 17 0.00058 26.3 1.3 22 84-105 63-84 (103)
63 2dlh_A Receptor-type tyrosine- 31.4 24 0.00082 26.3 2.2 24 83-106 74-97 (121)
64 1x5h_A Neogenin; RGM binding, 30.6 26 0.0009 26.6 2.4 24 83-106 75-98 (132)
65 2e3v_A Neural cell adhesion mo 30.4 33 0.0011 26.2 2.9 24 83-106 65-88 (122)
66 1x5y_A Myosin binding protein 30.1 39 0.0013 25.0 3.2 22 84-105 65-86 (111)
67 2ed9_A Netrin receptor DCC; tu 29.9 29 0.001 26.0 2.5 23 83-105 83-105 (124)
68 1uem_A KIAA1568 protein; immun 29.9 35 0.0012 25.3 2.9 23 83-105 70-92 (117)
69 1bpv_A Titin, A71, connectin; 29.8 46 0.0016 25.3 3.6 23 83-105 66-88 (112)
70 2yuw_A Myosin binding protein 29.7 35 0.0012 25.1 2.9 23 83-105 63-85 (110)
71 1x4z_A Biregional cell adhesio 29.3 37 0.0013 25.5 3.0 22 84-105 75-96 (121)
72 4doh_B Interleukin-20 receptor 28.8 87 0.003 26.5 5.7 23 85-107 160-182 (206)
73 2qbw_A PDZ-fibronectin fusion 28.7 34 0.0012 28.5 2.9 22 85-106 157-178 (195)
74 1wfu_A Unnamed protein product 28.4 49 0.0017 25.9 3.6 23 84-106 74-96 (120)
75 2ed7_A Netrin receptor DCC; tu 27.8 25 0.00085 26.1 1.7 23 84-106 73-95 (119)
76 1ujt_A KIAA1568 protein; fibro 26.6 39 0.0013 26.3 2.8 21 84-104 74-94 (120)
77 3mi6_A Alpha-galactosidase; NE 26.5 38 0.0013 35.4 3.3 42 59-100 651-695 (745)
78 2crz_A Fibronectin type-III do 26.3 31 0.0011 25.5 2.0 22 84-105 64-85 (110)
79 1x3d_A Fibronectin type-III do 26.3 35 0.0012 25.4 2.3 22 84-105 72-93 (118)
80 4doh_R Interleukin-20 receptor 26.0 1E+02 0.0034 26.4 5.6 24 84-107 172-195 (221)
81 1k85_A Chitinase A1; fibronect 26.0 45 0.0016 23.6 2.8 22 84-105 50-71 (88)
82 1q38_A Fibronectin; amyloid fi 25.4 23 0.00079 26.9 1.0 22 85-106 38-59 (89)
83 2kbg_A N-CAM 2, neural cell ad 23.9 46 0.0016 25.9 2.7 22 84-105 63-84 (114)
84 2ha1_A Fibronectin; beta sandw 23.6 49 0.0017 27.0 2.9 23 84-106 164-186 (201)
85 2dbj_A Proto-oncogene tyrosine 22.8 38 0.0013 25.7 2.0 22 84-105 78-99 (124)
86 1qr4_A Protein (tenascin); fib 22.4 52 0.0018 26.3 2.9 22 83-104 145-166 (186)
87 2gee_A Hypothetical protein; f 22.3 53 0.0018 27.1 2.9 23 84-106 167-189 (203)
88 2ic2_A CG9211-PA, GH03927P; IH 22.0 50 0.0017 25.2 2.5 21 85-105 71-91 (115)
89 3v6o_A Leptin receptor; recept 21.0 90 0.0031 26.0 4.2 24 85-108 167-190 (206)
90 1cd9_B G-CSF-R, protein (G-CSF 20.8 74 0.0025 26.2 3.5 24 84-107 171-194 (215)
91 3tgx_A Interleukin-21 receptor 20.3 60 0.0021 27.7 2.9 30 83-112 162-191 (219)
92 3lqm_A Interleukin-10 receptor 20.1 95 0.0033 25.8 4.1 26 83-108 153-178 (201)
93 1wk0_A KIAA0970 protein; fibro 20.0 71 0.0024 25.7 3.1 22 85-106 82-103 (137)
No 1
>1xbr_A Protein (T protein); complex (transcription factor/DNA), transcription factor, DNA-binding protein, transcription/DNA complex; HET: DNA; 2.50A {Xenopus laevis} SCOP: b.2.5.4
Probab=100.00 E-value=3e-76 Score=524.48 Aligned_cols=183 Identities=70% Similarity=1.185 Sum_probs=178.0
Q ss_pred CCEEEecCchhHhhhcCCCCeeEEEeCCCcCCCeeEEEeeCCCCCCceeEEEEEEEccCcceEEeCCeEEECCCCCCCCC
Q psy14943 51 NPQVILEDLDLWLKFQSHTNEMIVTKNGRRMFPVVKVSIKGLEPDAMYTVLLEFLQIEQKRWKYVNGEWVPAGKPEQPPM 130 (328)
Q Consensus 51 ~I~V~L~n~~lW~~F~~~~~EMIVtk~GRrmFP~l~~~vsGLdP~~~Y~v~l~~~~~D~~ryk~~~~~W~~~~~~~~~~~ 130 (328)
+|+|+|+|++||++||+++|||||||+||||||.|+|+|+||||++.|.|+|+|+++|++||||++|+|+++|++++..+
T Consensus 1 ~i~V~L~~~~LW~~F~~~~tEMIiTk~GRrmFP~l~~~v~GLdp~~~Y~v~l~~~~~D~~ryk~~~~~W~~~gkae~~~p 80 (184)
T 1xbr_A 1 ELKVSLEERDLWTRFKELTNEMIVTKNGRRMFPVLKVSMSGLDPNAMYTVLLDFVAADNHRWKYVNGEWVPGGKPEPQAP 80 (184)
T ss_dssp CCEEEETTHHHHHHHHHHCCEEECBTTCEECSSCCEEEEECSCTTSEEEEEEEEEESSSCEEEEETTEEEEESSCCCCCC
T ss_pred CCEEEEcCHHHHHhhcccCcEEEEecCCcccCCccEEEEeCCCcccCeEEEEEEEEccCceEEEECCcEEEcCccCCCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEcCCCcchhhhhhcCeeeeeeEEeeeCCCCCCceEeccccccccEEEEEEeCCccceEEEeecCcceEEEeccccc
Q psy14943 131 NAMYLHPESPNFGEHWMKDCVSFAKVKLTNHSNGSGQIMLNSLHKYEPRIHLVKVATEQQIIKTFPFPETQFIAVTAYQN 210 (328)
Q Consensus 131 ~~~~~Hp~~~~~G~~WM~~~vsF~klkiTN~~~~~~~I~L~s~hKY~PvL~I~~~~~~~~~~~~f~fpeTqFIaVT~~~~ 210 (328)
.++|+|||||++|++||+++|+|++||||||.++.++|+|+|||||+|||||+++++..+.+.+|+||||+|||||+
T Consensus 81 ~r~~~Hpdsp~~G~~WM~~~VsF~klKlTNn~~~~~~i~L~SmHKY~PrlhI~~~~~~~~~~~tf~FpeT~FiAVTa--- 157 (184)
T 1xbr_A 81 SCVYIHPDSPNFGAHWMKDPVSFSKVKLTNKMNGGGQIMLNSLHKYEPRIHIVRVGGTQRMITSHSFPETQFIAVTA--- 157 (184)
T ss_dssp CCCEECTTCSEEHHHHHHSCEECTTCEEESSCCTTTCEECCSSSEEEEEEEEEEESSSSCCEEEEECGGGCEEEESS---
T ss_pred cceEECCCCchhHHHHhhCCceeccccccccCCCCCeEEeccCceEEEEEEEEEeCCCcceEEEEECCCcEEEEEec---
Confidence 99999999999999999999999999999998888899999999999999999998877778999999999999999
Q ss_pred ceeeeeecccCccccccccccCCcchhhcccccc
Q psy14943 211 EEFIAVTAYQNEEVTSLKIKFNPFAKAFLDAKEK 244 (328)
Q Consensus 211 ~~fiav~~YqN~~I~~LKi~~NpfAkg~~~~~~~ 244 (328)
|||++||+|||++|||||||||.+++
T Consensus 158 --------YQN~~It~LKi~~NpFAkgFr~~~~~ 183 (184)
T 1xbr_A 158 --------YQNEEITALKIKHNPFAKAFLDAKER 183 (184)
T ss_dssp --------CCCHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred --------cCChhHhhhhhccCCCCcccCCCcCC
Confidence 99999999999999999999998755
No 2
>1h6f_A T-box transcription factor TBX3; transcription factor, TBX3, T-box transcription factor; 1.7A {Homo sapiens} SCOP: b.2.5.4
Probab=100.00 E-value=3.3e-74 Score=515.13 Aligned_cols=184 Identities=46% Similarity=0.832 Sum_probs=172.5
Q ss_pred CCCCCEEEecCchhHhhhcCCCCeeEEEeCCCcCCCeeEEEeeCCCCCCceeEEEEEEEccCcceEEeCCeEEECCCCCC
Q psy14943 48 AYGNPQVILEDLDLWLKFQSHTNEMIVTKNGRRMFPVVKVSIKGLEPDAMYTVLLEFLQIEQKRWKYVNGEWVPAGKPEQ 127 (328)
Q Consensus 48 ~~~~I~V~L~n~~lW~~F~~~~~EMIVtk~GRrmFP~l~~~vsGLdP~~~Y~v~l~~~~~D~~ryk~~~~~W~~~~~~~~ 127 (328)
|+++|+|+|+|++||++||+++|||||||+||||||.|+|+|+||||++.|.|+|+|+++|++||+|++|+|+++|++++
T Consensus 1 m~~~i~V~L~~~~LW~~F~~~~tEMIiTk~GRrmFP~l~~~v~GLdp~~~Y~v~l~~~~~d~~rykf~~~~W~~~gkae~ 80 (193)
T 1h6f_A 1 MKDDPKVHLEAKELWDQFHKRGTEMVITKSGRRMFPPFKVRCSGLDKKAKYILLMDIIAADDCRYKFHNSRWMVAGKADP 80 (193)
T ss_dssp ---CCEEEETTHHHHHHHHHHCCEEECCTTCBCCSSCCEEEEESCCSSSEEEEEEEEEEEEEEEEEEETTEEEEEEECCC
T ss_pred CCCCCEEEECCHHHHHhhCcccceEEEecCCcccCceeEEEEeCCCcccceEEEEEEEEccCceeeccCCcEEECcccCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEcCCCcchhhhhhcCeeeeeeEEeeeCCCC-CCceEeccccccccEEEEEEeCCcc----ceEEEeecCcceE
Q psy14943 128 PPMNAMYLHPESPNFGEHWMKDCVSFAKVKLTNHSNG-SGQIMLNSLHKYEPRIHLVKVATEQ----QIIKTFPFPETQF 202 (328)
Q Consensus 128 ~~~~~~~~Hp~~~~~G~~WM~~~vsF~klkiTN~~~~-~~~I~L~s~hKY~PvL~I~~~~~~~----~~~~~f~fpeTqF 202 (328)
..+.++|+|||||++|++||+++|+|++||||||..+ .++|+|+|||||+|||||+++++.. ..+++|+||||+|
T Consensus 81 ~~p~r~~~Hpdsp~tG~~WM~~~VsF~klKLTNn~~~~~~~i~L~SmHKY~PrlhI~~~~~~~~~~~~~~~tf~FpeT~F 160 (193)
T 1h6f_A 81 EMPKRMYIHPDSPATGEQWMSKVVTFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYLFPETEF 160 (193)
T ss_dssp CCCCCCEECTTCSEEHHHHTTSCEECTTCCEECCTTCCSCCEECCTTEEEEEEEEEECCSCGGGGGGSCCEEEECGGGCE
T ss_pred CCCcceEecCCCcccHHHHhhCCcceeeeeeeccCCCCCCcEEecCCceEeeEEEEEEcCCccCCCCcceEEEECCCeEE
Confidence 9999999999999999999999999999999999764 6799999999999999999987642 3578999999999
Q ss_pred EEecccccceeeeeecccCccccccccccCCcchhhcccc
Q psy14943 203 IAVTAYQNEEFIAVTAYQNEEVTSLKIKFNPFAKAFLDAK 242 (328)
Q Consensus 203 IaVT~~~~~~fiav~~YqN~~I~~LKi~~NpfAkg~~~~~ 242 (328)
||||+ |||++||+|||++|||||||||.+
T Consensus 161 iAVTa-----------YQN~~It~LKi~~NpFAkgFr~~~ 189 (193)
T 1h6f_A 161 IAVTA-----------YQNDKITQLKIDNNPFAKGFRDTG 189 (193)
T ss_dssp EEESS-----------CSCHHHHHHHHHHCGGGGGGCC--
T ss_pred EEEec-----------cCchhhhhhhhcCCCCCcccccCC
Confidence 99999 999999999999999999999964
No 3
>2x6u_A T-box transcription factor TBX5; developmental protein, DNA-binding, HOLT-ORAM-syndrome, IG-fold, nuclear protein, repressor; HET: PE4; 1.90A {Homo sapiens} PDB: 2x6v_A*
Probab=100.00 E-value=5.9e-74 Score=516.90 Aligned_cols=186 Identities=45% Similarity=0.830 Sum_probs=161.8
Q ss_pred CCCCEEEecCchhHhhhcCCCCeeEEEeCCCcCCCeeEEEeeCCCCCCceeEEEEEEEccCcceEEeCCeEEECCCCCCC
Q psy14943 49 YGNPQVILEDLDLWLKFQSHTNEMIVTKNGRRMFPVVKVSIKGLEPDAMYTVLLEFLQIEQKRWKYVNGEWVPAGKPEQP 128 (328)
Q Consensus 49 ~~~I~V~L~n~~lW~~F~~~~~EMIVtk~GRrmFP~l~~~vsGLdP~~~Y~v~l~~~~~D~~ryk~~~~~W~~~~~~~~~ 128 (328)
.++|+|+|+|++||++||+++|||||||+||||||.|+|+|+||||++.|.|+|+|+++|++||||++|+|+++|++++.
T Consensus 3 ~~~i~V~L~~~~LW~~F~~~~tEMIiTk~GRrmFP~l~~~vsGLdp~~~Y~v~l~~~~~D~~rykf~~~~W~~~gkae~~ 82 (203)
T 2x6u_A 3 MEGIKVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYILLMDIVPADDHRYKFADNKWSVTGKAEPA 82 (203)
T ss_dssp -CCCEEEETTHHHHHHHHHHCCEEECBSSCEECSSCCEEEEESCCSSSEEEEEEEEEEEEEEEEEEETTEEEEEEECCCC
T ss_pred cCCCEEEECCHHHHHhcCcCCceEEEecCCcccCceeEEEEeCCCcccCeEEEEEEEEccCceeEEeCCcEeECcccCCC
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEcCCCcchhhhhhcCeeeeeeEEeeeCCC-CCCceEeccccccccEEEEEEeCCc------cceEEEeecCcce
Q psy14943 129 PMNAMYLHPESPNFGEHWMKDCVSFAKVKLTNHSN-GSGQIMLNSLHKYEPRIHLVKVATE------QQIIKTFPFPETQ 201 (328)
Q Consensus 129 ~~~~~~~Hp~~~~~G~~WM~~~vsF~klkiTN~~~-~~~~I~L~s~hKY~PvL~I~~~~~~------~~~~~~f~fpeTq 201 (328)
.+.++|+|||||++|++||+++|+|++||||||.. ..++|+|+|||||+|||||+++++. ...+.+|+||||+
T Consensus 83 ~p~r~y~Hpdsp~tG~~WM~~~VsF~klKLTNn~~d~~g~I~L~SmHKYqPrlhIv~~~~~~~~~~~~~~~~tf~FpeT~ 162 (203)
T 2x6u_A 83 MPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNGFGSKNTAFCTHVFPETA 162 (203)
T ss_dssp ---CCEECTTCSEEHHHHHHSCEECTTCEEECCTTCSSCCEECCTTEEEEEEEEEEECCTTSCSSSSCCCEEEECCGGGC
T ss_pred CCcceEECCCCccchHHHhhCCceeeeeeceeccCCccceEeecCCceEEEEEEEEEeCCccccCcCccceEEEEcCCcE
Confidence 89999999999999999999999999999999964 5679999999999999999998653 2357899999999
Q ss_pred EEEecccccceeeeeecccCccccccccccCCcchhhccccccc
Q psy14943 202 FIAVTAYQNEEFIAVTAYQNEEVTSLKIKFNPFAKAFLDAKEKT 245 (328)
Q Consensus 202 FIaVT~~~~~~fiav~~YqN~~I~~LKi~~NpfAkg~~~~~~~~ 245 (328)
|||||+ |||++||+|||++|||||||||....+
T Consensus 163 FiAVTa-----------YQN~~It~LKi~~NPFAkgFR~~~~~~ 195 (203)
T 2x6u_A 163 FIAVTS-----------YQNHKITQLKIENNPFAKGFRGSDDME 195 (203)
T ss_dssp EEEESS-----------CCSHHHHHHHHHHC-------------
T ss_pred EEEEee-----------ecchhhhhhhhccCCCccccccCccch
Confidence 999999 999999999999999999999976543
No 4
>4a04_A T-box transcription factor TBX1; transcription, T-box proteins; HET: DNA; 2.58A {Homo sapiens}
Probab=100.00 E-value=9.4e-73 Score=509.32 Aligned_cols=181 Identities=48% Similarity=0.818 Sum_probs=170.8
Q ss_pred CCCCEEEecCchhHhhhcCCCCeeEEEeCCCcCCCeeEEEeeCCCCCCceeEEEEEEEccCcceEE--eCCeEEECCCCC
Q psy14943 49 YGNPQVILEDLDLWLKFQSHTNEMIVTKNGRRMFPVVKVSIKGLEPDAMYTVLLEFLQIEQKRWKY--VNGEWVPAGKPE 126 (328)
Q Consensus 49 ~~~I~V~L~n~~lW~~F~~~~~EMIVtk~GRrmFP~l~~~vsGLdP~~~Y~v~l~~~~~D~~ryk~--~~~~W~~~~~~~ 126 (328)
.++|+|+|+|++||++||+++|||||||+||||||.|+|+|+||||++.|.|+|+|+++|++|||| ++|+|+++|+++
T Consensus 13 ~~~i~V~Le~~~LW~~Fh~~~tEMIITK~GRrmFP~l~~~vsGLdp~~~Y~~~l~~~~~D~~ryry~~~~~~W~~~gkae 92 (203)
T 4a04_A 13 QGGVSVQLEMKALWDEFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLVAGKAD 92 (203)
T ss_dssp --CCEEEETTHHHHHHHHHHCCEEECCSSCEECSSCEEEEEESCCTTSEEEEEEEEEESCSEEEEEETTTTEEEEEEECC
T ss_pred cCCcEEEeCCHHHHHhhCcCCCeEEEEeCCcccCCceEEEEeCCCcccCcEEEEEEEEccCCeEEecccCCCEeECCccC
Confidence 578999999999999999999999999999999999999999999999999999999999999998 699999999999
Q ss_pred CCCCCceEEcCCCcchhhhhhcCeeeeeeEEeeeCCC-CCCceEeccccccccEEEEEEeCCc-------cceEEEeecC
Q psy14943 127 QPPMNAMYLHPESPNFGEHWMKDCVSFAKVKLTNHSN-GSGQIMLNSLHKYEPRIHLVKVATE-------QQIIKTFPFP 198 (328)
Q Consensus 127 ~~~~~~~~~Hp~~~~~G~~WM~~~vsF~klkiTN~~~-~~~~I~L~s~hKY~PvL~I~~~~~~-------~~~~~~f~fp 198 (328)
+..+.++|+|||||++|++||+++|+|++|||||+.. +.++|+|+|||||+|||||+++++. ...+++|+||
T Consensus 93 ~~~p~r~~~Hpdsp~tG~~WM~~~VsF~klKLTNn~~d~~g~I~L~SmHKYqPrlhIv~~~~~~~~~~~~~~~~~tf~Fp 172 (203)
T 4a04_A 93 PATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVYVDPRKDSEKYAEENFKTFVFE 172 (203)
T ss_dssp CCCCCCCCBCTTCSEEHHHHHHSCEEECSCEEECCTTCCSSCEECCTTCEEEEEEEEEECCCC--------CCEEEEECG
T ss_pred CCCCCceEEcCCCCcCHHHHhhCcceeeeeecccCccCcCCEEEEeeccccccEEEEEEcCCCcccccccCCceEEEECC
Confidence 9888999999999999999999999999999999964 5679999999999999999998653 1357899999
Q ss_pred cceEEEecccccceeeeeecccCccccccccccCCcchhhcc
Q psy14943 199 ETQFIAVTAYQNEEFIAVTAYQNEEVTSLKIKFNPFAKAFLD 240 (328)
Q Consensus 199 eTqFIaVT~~~~~~fiav~~YqN~~I~~LKi~~NpfAkg~~~ 240 (328)
||+|||||+ |||++||+|||++|||||||||
T Consensus 173 eT~FiAVTa-----------YQN~~It~LKi~~NPFAkgFrd 203 (203)
T 4a04_A 173 ETRFTAVTA-----------YQNHRITQLKIASNPFAKGFRD 203 (203)
T ss_dssp GGCEEEESS-----------CCCHHHHHHHHHHCGGGGGGCC
T ss_pred CcEEEeeCc-----------cCCHHHHHHHhccCCCCcccCC
Confidence 999999999 9999999999999999999997
No 5
>2x6u_A T-box transcription factor TBX5; developmental protein, DNA-binding, HOLT-ORAM-syndrome, IG-fold, nuclear protein, repressor; HET: PE4; 1.90A {Homo sapiens} PDB: 2x6v_A*
Probab=99.84 E-value=2.6e-22 Score=180.50 Aligned_cols=69 Identities=36% Similarity=0.756 Sum_probs=62.5
Q ss_pred cccceeeeCCceEeCCCCCCCCCCceecCCCCCccccccccccceeeeEEeccCCCCCCCCCCCCCCCeEeeecCC
Q psy14943 253 TTNEWKYVNGEWVPAGKPEQPPMNAMYLHPESPNFGEHWMKDCVSFAKVKLTNHSNGSGQSGMGTQGPVTLEVRHT 328 (328)
Q Consensus 253 ~~~rykf~ng~W~~aGkae~~~~~r~~~Hpdsp~~G~~Wm~~~vsF~klKLTNn~~~~~~~~~~~~~~i~l~s~h~ 328 (328)
|.+||||++|+|+++|++|+.++.|+|+|||||++|++||+++|||+|||||||. +|++|+|+|+|||+
T Consensus 62 D~~rykf~~~~W~~~gkae~~~p~r~y~Hpdsp~tG~~WM~~~VsF~klKLTNn~-------~d~~g~I~L~SmHK 130 (203)
T 2x6u_A 62 DDHRYKFADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNH-------LDPFGHIILNSMHK 130 (203)
T ss_dssp EEEEEEEETTEEEEEEECCCC---CCEECTTCSEEHHHHHHSCEECTTCEEECCT-------TCSSCCEECCTTEE
T ss_pred cCceeEEeCCcEeECcccCCCCCcceEECCCCccchHHHhhCCceeeeeeceecc-------CCccceEeecCCce
Confidence 3579999999999999999999999999999999999999999999999999996 78889999999995
No 6
>1h6f_A T-box transcription factor TBX3; transcription factor, TBX3, T-box transcription factor; 1.7A {Homo sapiens} SCOP: b.2.5.4
Probab=99.83 E-value=3.9e-22 Score=178.16 Aligned_cols=69 Identities=38% Similarity=0.705 Sum_probs=65.0
Q ss_pred cccceeeeCCceEeCCCCCCCCCCceecCCCCCccccccccccceeeeEEeccCCCCCCCCCCCCCCCeEeeecCC
Q psy14943 253 TTNEWKYVNGEWVPAGKPEQPPMNAMYLHPESPNFGEHWMKDCVSFAKVKLTNHSNGSGQSGMGTQGPVTLEVRHT 328 (328)
Q Consensus 253 ~~~rykf~ng~W~~aGkae~~~~~r~~~Hpdsp~~G~~Wm~~~vsF~klKLTNn~~~~~~~~~~~~~~i~l~s~h~ 328 (328)
|.+||+|++|+|+++|++|+..|.|+|+|||||++|++||+++|||+|||||||. .|++|+|+|+|||+
T Consensus 61 d~~rykf~~~~W~~~gkae~~~p~r~~~Hpdsp~tG~~WM~~~VsF~klKLTNn~-------~~~~~~i~L~SmHK 129 (193)
T 1h6f_A 61 DDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMSKVVTFHKLKLTNNI-------SDKHGFTILNSMHK 129 (193)
T ss_dssp EEEEEEEETTEEEEEEECCCCCCCCCEECTTCSEEHHHHTTSCEECTTCCEECCT-------TCCSCCEECCTTEE
T ss_pred cCceeeccCCcEEECcccCCCCCcceEecCCCcccHHHHhhCCcceeeeeeeccC-------CCCCCcEEecCCce
Confidence 3578999999999999999999999999999999999999999999999999997 67789999999995
No 7
>1xbr_A Protein (T protein); complex (transcription factor/DNA), transcription factor, DNA-binding protein, transcription/DNA complex; HET: DNA; 2.50A {Xenopus laevis} SCOP: b.2.5.4
Probab=99.83 E-value=1e-21 Score=174.13 Aligned_cols=68 Identities=57% Similarity=1.093 Sum_probs=62.7
Q ss_pred cccceeeeCCceEeCCCCCCCCCCceecCCCCCccccccccccceeeeEEeccCCCCCCCCCCCCCCCeEeeecCC
Q psy14943 253 TTNEWKYVNGEWVPAGKPEQPPMNAMYLHPESPNFGEHWMKDCVSFAKVKLTNHSNGSGQSGMGTQGPVTLEVRHT 328 (328)
Q Consensus 253 ~~~rykf~ng~W~~aGkae~~~~~r~~~Hpdsp~~G~~Wm~~~vsF~klKLTNn~~~~~~~~~~~~~~i~l~s~h~ 328 (328)
|.+||||++|+|+++|++|+.++.|+|+|||||++|++||+++|||+|||||||. ++.|+|+|+|||+
T Consensus 58 D~~ryk~~~~~W~~~gkae~~~p~r~~~Hpdsp~~G~~WM~~~VsF~klKlTNn~--------~~~~~i~L~SmHK 125 (184)
T 1xbr_A 58 DNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKDPVSFSKVKLTNKM--------NGGGQIMLNSLHK 125 (184)
T ss_dssp SSCEEEEETTEEEEESSCCCCCCCCCEECTTCSEEHHHHHHSCEECTTCEEESSC--------CTTTCEECCSSSE
T ss_pred cCceEEEECCcEEEcCccCCCCCcceEECCCCchhHHHHhhCCceeccccccccC--------CCCCeEEeccCce
Confidence 3578999999999999999999999999999999999999999999999999995 3457899999995
No 8
>4a04_A T-box transcription factor TBX1; transcription, T-box proteins; HET: DNA; 2.58A {Homo sapiens}
Probab=99.82 E-value=2.3e-21 Score=174.46 Aligned_cols=85 Identities=32% Similarity=0.616 Sum_probs=71.0
Q ss_pred cCCcchhh--cccccccCcccccccccceeeeCCceEeCCCCCCCCCCceecCCCCCccccccccccceeeeEEeccCCC
Q psy14943 231 FNPFAKAF--LDAKEKTDNYYNQQTTNEWKYVNGEWVPAGKPEQPPMNAMYLHPESPNFGEHWMKDCVSFAKVKLTNHSN 308 (328)
Q Consensus 231 ~NpfAkg~--~~~~~~~~~~y~~s~~~rykf~ng~W~~aGkae~~~~~r~~~Hpdsp~~G~~Wm~~~vsF~klKLTNn~~ 308 (328)
.+|-|+.. ++..+.+++ ++||.|++|+|+++|++|+..++|+|+|||||++|++||+++|||+|||||||.
T Consensus 56 Ldp~~~Y~~~l~~~~~D~~------ryry~~~~~~W~~~gkae~~~p~r~~~Hpdsp~tG~~WM~~~VsF~klKLTNn~- 128 (203)
T 4a04_A 56 MDPMADYMLLMDFVPVDDK------RYRYAFHSSSWLVAGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNL- 128 (203)
T ss_dssp CCTTSEEEEEEEEEESCSE------EEEEETTTTEEEEEEECCCCCCCCCCBCTTCSEEHHHHHHSCEEECSCEEECCT-
T ss_pred CCcccCcEEEEEEEEccCC------eEEecccCCCEeECCccCCCCCCceEEcCCCCcCHHHHhhCcceeeeeecccCc-
Confidence 46666653 444444432 346667899999999999998899999999999999999999999999999996
Q ss_pred CCCCCCCCCCCCeEeeecCC
Q psy14943 309 GSGQSGMGTQGPVTLEVRHT 328 (328)
Q Consensus 309 ~~~~~~~~~~~~i~l~s~h~ 328 (328)
+|++|+|+|+|||+
T Consensus 129 ------~d~~g~I~L~SmHK 142 (203)
T 4a04_A 129 ------LDDNGHIILNSMHR 142 (203)
T ss_dssp ------TCCSSCEECCTTCE
T ss_pred ------cCcCCEEEEeeccc
Confidence 78889999999995
No 9
>3s9d_B Interferon alpha/beta receptor 2; human, type I interferons, IFNA2, ifnar2, SUB-complex of the interferon signaling complex; 2.00A {Homo sapiens} PDB: 1n6u_A 1n6v_A 2hym_A 2ksx_B 2kz1_B 2lag_B 3se4_C* 3se3_C* 3s8w_A*
Probab=55.63 E-value=21 Score=31.01 Aligned_cols=61 Identities=11% Similarity=0.137 Sum_probs=37.6
Q ss_pred CCCCEEEecCchhHhhhcCCCCeeEEEe--CC------CcC----CCeeEEEeeCCCCCCceeEEEEEEEccC
Q psy14943 49 YGNPQVILEDLDLWLKFQSHTNEMIVTK--NG------RRM----FPVVKVSIKGLEPDAMYTVLLEFLQIEQ 109 (328)
Q Consensus 49 ~~~I~V~L~n~~lW~~F~~~~~EMIVtk--~G------Rrm----FP~l~~~vsGLdP~~~Y~v~l~~~~~D~ 109 (328)
.+.|.|.+....+|.+.-+....-++-. .| +.+ -....+.|.+|.|...|+|.+.+++.++
T Consensus 112 ~~~i~V~i~~P~~~~~~~~~y~sl~~~~~~~~~~k~~~~~~~~~~~~~~~~vi~~L~P~T~YCv~V~~~~~~~ 184 (199)
T 3s9d_B 112 TNHINVMVKFPSIVEEELQFDLSLVIEEQSEGIVKKHKPEIKGNMSGNFTYIIDKLIPNTNYCVSVYLEHSDE 184 (199)
T ss_dssp SSCEEEEEECCC----CCCCCCEEEEEEEETTEEEEECCC----CCSEEEEEECSCCSSCEEEEEEEEEC---
T ss_pred CCEEEEEEECCcccccccceeEEEEEEEEecccceEeeeeeeecccCcceEEEeccCCCCcEEEEEEEEeCCC
Confidence 4578899988888866555555544432 22 212 2445789999999999999999877555
No 10
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.06 E-value=13 Score=27.78 Aligned_cols=20 Identities=40% Similarity=0.630 Sum_probs=18.5
Q ss_pred EEEeeCCCCCCceeEEEEEE
Q psy14943 86 KVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 86 ~~~vsGLdP~~~Y~v~l~~~ 105 (328)
.|.|.||.|...|.+.|.-+
T Consensus 62 ~~~l~~L~p~t~Y~~~V~A~ 81 (104)
T 2dkm_A 62 EVLLDGLEPGRDYEVSVQSL 81 (104)
T ss_dssp EEEEESCCTTCCEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEEEEE
Confidence 89999999999999988865
No 11
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=48.30 E-value=14 Score=26.79 Aligned_cols=23 Identities=30% Similarity=0.442 Sum_probs=19.8
Q ss_pred CeeEEEeeCCCCCCceeEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
....+.|.||.|...|.+.|.-.
T Consensus 53 ~~~~~~l~~L~p~t~Y~~~V~A~ 75 (94)
T 1j8k_A 53 EEDTAELQGLRPGSEYTVSVVAL 75 (94)
T ss_dssp SCCEEEECSCCCCSEEEEEEEEC
T ss_pred CccEEEeCCCCCCCEEEEEEEEE
Confidence 45789999999999999988764
No 12
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=47.88 E-value=14 Score=27.30 Aligned_cols=24 Identities=17% Similarity=0.463 Sum_probs=20.7
Q ss_pred CeeEEEeeCCCCCCceeEEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
....|.|.||.|...|.+.|.-.-
T Consensus 53 ~~t~~~i~~L~p~t~Y~~~V~A~n 76 (100)
T 3b83_A 53 SITSLTLTNLEPNTTYEIRIVARN 76 (100)
T ss_dssp TEEEEEECSCCTTCEEEEEEEEEE
T ss_pred cceEEEECCCCCCCEEEEEEEEEe
Confidence 467899999999999999887654
No 13
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=47.85 E-value=12 Score=27.44 Aligned_cols=23 Identities=26% Similarity=0.387 Sum_probs=19.7
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
.-.+.|.||.|...|.+.|.-..
T Consensus 57 ~t~~~l~~L~p~t~Y~v~V~A~~ 79 (97)
T 3qht_C 57 SSTATISGLSPGVDYTITVYAYY 79 (97)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 45899999999999999888654
No 14
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=47.39 E-value=14 Score=27.70 Aligned_cols=22 Identities=27% Similarity=0.443 Sum_probs=19.0
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
.-.+.|.||+|...|.+.|.-.
T Consensus 63 ~ts~~l~~L~p~t~Y~~~V~A~ 84 (103)
T 3t04_D 63 YSTATISGLKPGVDYTITVYAY 84 (103)
T ss_dssp CCEEEECSCCTTCCEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEE
Confidence 4589999999999999988754
No 15
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=47.30 E-value=13 Score=27.67 Aligned_cols=23 Identities=26% Similarity=0.384 Sum_probs=19.6
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
.-.+.|+||.|...|.+.|.-..
T Consensus 54 ~t~~~l~gL~P~t~Y~~~V~A~~ 76 (98)
T 3tes_A 54 ERSYDLTGLKPGTEYTVSIYGVK 76 (98)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEEe
Confidence 45899999999999999887654
No 16
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=46.48 E-value=19 Score=26.71 Aligned_cols=26 Identities=23% Similarity=0.345 Sum_probs=21.5
Q ss_pred eeEEEeeCCCCCCceeEEEEEEEccC
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQIEQ 109 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~~D~ 109 (328)
.-.|.|.||.|...|.+.|.-...+.
T Consensus 59 ~t~~~l~~L~p~t~Y~~~V~A~~~~~ 84 (101)
T 3k2m_C 59 SSTATISGLSPGVDYTITVYAWGEDS 84 (101)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEEECT
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCc
Confidence 35899999999999999988765443
No 17
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=46.10 E-value=13 Score=27.74 Aligned_cols=23 Identities=35% Similarity=0.359 Sum_probs=19.8
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
.-.|.|.||.|...|.+.|.-.-
T Consensus 55 ~~~~~l~~L~p~t~Y~~~V~A~~ 77 (104)
T 2rb8_A 55 ENQYSIGNLKPDTEYEVSLISRR 77 (104)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 35899999999999999988654
No 18
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.48 E-value=14 Score=28.73 Aligned_cols=22 Identities=23% Similarity=0.477 Sum_probs=19.0
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...+.|.||.|...|.+.|.-.
T Consensus 77 ~~~~~v~gL~P~T~Y~f~V~A~ 98 (123)
T 2edd_A 77 SLSYTATGLKPNTMYEFSVMVT 98 (123)
T ss_dssp SSEEEEESCCTTCEEEEEEEEC
T ss_pred ceEEEecCCCCCCEEEEEEEEe
Confidence 5689999999999999988653
No 19
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=45.36 E-value=14 Score=28.71 Aligned_cols=21 Identities=19% Similarity=0.390 Sum_probs=19.0
Q ss_pred EEEeeCCCCCCceeEEEEEEE
Q psy14943 86 KVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 86 ~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
.|.|.||.|...|.|.|.-+.
T Consensus 71 ~~~l~gL~PgT~Y~~~V~A~~ 91 (112)
T 2cui_A 71 SAVLRDLRSGTLYSLTLYGLR 91 (112)
T ss_dssp EEEECSCCTTCEEEEEEEEEC
T ss_pred EEEeCCCCCCCEEEEEEEEEE
Confidence 899999999999999988764
No 20
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=45.12 E-value=15 Score=26.85 Aligned_cols=23 Identities=35% Similarity=0.520 Sum_probs=19.7
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
...|.|.||.|...|.+.|.-..
T Consensus 54 ~~~~~i~~L~p~t~Y~~~V~A~n 76 (98)
T 3teu_A 54 STSVTITGLTPGVEYVVSVYALK 76 (98)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEecCCCCCCEEEEEEEEEe
Confidence 46899999999999999887653
No 21
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=44.68 E-value=14 Score=27.98 Aligned_cols=23 Identities=22% Similarity=0.248 Sum_probs=19.9
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
.-.|.|.||.|...|.+.|.-..
T Consensus 58 ~t~~~l~~L~P~t~Y~~~V~A~~ 80 (115)
T 2cuh_A 58 AVDYPLHDLVLHTNYTATVRGLR 80 (115)
T ss_dssp CSEEEECSCCSSSEEEEEEEEEE
T ss_pred ccEEEEeCCCCCCEEEEEEEEEe
Confidence 35899999999999999988654
No 22
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=44.60 E-value=15 Score=27.06 Aligned_cols=23 Identities=26% Similarity=0.424 Sum_probs=19.8
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
...|.|.||.|...|.+.|.-.-
T Consensus 62 ~~~~~l~~L~p~t~Y~~~V~A~n 84 (108)
T 2djs_A 62 TNTARIDGLRPGMVYVVQVRART 84 (108)
T ss_dssp SSEEEEESCCTTCEEEEEEEEEE
T ss_pred ccEEEEcCCCCCCEEEEEEEEEe
Confidence 46899999999999999887654
No 23
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=42.93 E-value=12 Score=28.71 Aligned_cols=23 Identities=17% Similarity=0.475 Sum_probs=19.7
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
...+.|.||.|+..|.+.|.-..
T Consensus 67 ~~~~~i~gL~P~T~Y~f~V~A~~ 89 (113)
T 1x5j_A 67 TLSYLVTGLKPNTLYEFSVMVTK 89 (113)
T ss_dssp SSEEEEESCCTTCEECCEEEEEC
T ss_pred cCEEEeCCCCCCcEEEEEEEEec
Confidence 56899999999999999986543
No 24
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.90 E-value=19 Score=26.82 Aligned_cols=21 Identities=24% Similarity=0.387 Sum_probs=18.6
Q ss_pred eEEEeeCCCCCCceeEEEEEE
Q psy14943 85 VKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 85 l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
..+.|.||.|...|.+.|.-.
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~ 84 (109)
T 2e7h_A 64 NRAELRGLKRGASYLVQVRAR 84 (109)
T ss_dssp SEEEEESCCTTSCEEEEEEEE
T ss_pred CEEEECCCCCCCeEEEEEEEE
Confidence 489999999999999988764
No 25
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=42.71 E-value=17 Score=26.61 Aligned_cols=22 Identities=18% Similarity=0.301 Sum_probs=19.0
Q ss_pred eEEEeeCCCCCCceeEEEEEEE
Q psy14943 85 VKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 85 l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
..|.|.||.|...|.+.|.-.-
T Consensus 62 ~~~~i~~L~p~t~Y~~~V~A~n 83 (107)
T 2dn7_A 62 QHFTVTGLHKGTTYIFRLAAKN 83 (107)
T ss_dssp CEEEEECCCTTCEEEEEEEEEE
T ss_pred cEEEeCCCCCCCEEEEEEEEEc
Confidence 4899999999999999887643
No 26
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=42.64 E-value=17 Score=27.24 Aligned_cols=22 Identities=23% Similarity=0.395 Sum_probs=18.9
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...|.|.||.|...|.+.|.-.
T Consensus 68 ~~~~~i~~L~p~t~Y~~~V~A~ 89 (114)
T 1x4y_A 68 RYWHSISHLQPETSYDIKMQCF 89 (114)
T ss_dssp CCEEEECSCCTTCEEEEEEEEE
T ss_pred EeEEEcCCCCCCCEEEEEEEEE
Confidence 3579999999999999988754
No 27
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=42.57 E-value=17 Score=27.69 Aligned_cols=22 Identities=18% Similarity=0.342 Sum_probs=20.0
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
.-.+.|.||.|...|.+.|.-+
T Consensus 58 ~t~~~i~gL~PgT~Y~~~V~A~ 79 (104)
T 2dle_A 58 EPRAVIPGLRSSTFYNITVCPV 79 (104)
T ss_dssp SSEEECCSCCSSCEEEEEEEEE
T ss_pred CCEEEECCCCCCCEEEEEEEEE
Confidence 4589999999999999999986
No 28
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=42.27 E-value=15 Score=27.82 Aligned_cols=23 Identities=26% Similarity=0.320 Sum_probs=19.5
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
.-.+.|+||.|...|.|.|-=..
T Consensus 58 ~~s~~l~~L~PgT~Y~V~v~a~~ 80 (95)
T 2h41_A 58 ATSVNIPDLLPGRKYIVNVYQIS 80 (95)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEc
Confidence 35899999999999999987543
No 29
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=41.61 E-value=17 Score=27.14 Aligned_cols=22 Identities=23% Similarity=0.433 Sum_probs=19.5
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
.-.|.|.||.|...|.+.|.-.
T Consensus 58 ~ts~~l~~L~p~t~Y~~~V~A~ 79 (105)
T 2cum_A 58 ITSHQLLGLFPSTSYNARLQAM 79 (105)
T ss_dssp CSEEEECSCCTTCEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEE
Confidence 4589999999999999988775
No 30
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=40.86 E-value=22 Score=26.51 Aligned_cols=23 Identities=17% Similarity=0.245 Sum_probs=20.0
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
...|.|.||.|...|.+.|.-.-
T Consensus 77 ~~~~~i~~L~p~t~Y~~~V~A~n 99 (122)
T 1va9_A 77 SEVYTLDNLKKFAQYGVVVQAFN 99 (122)
T ss_dssp EEEEEEESCCSSCCEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEc
Confidence 47999999999999999887654
No 31
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=40.60 E-value=18 Score=27.87 Aligned_cols=23 Identities=30% Similarity=0.501 Sum_probs=19.6
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
.-.|.|.||.|...|.+.|.-..
T Consensus 56 ~ts~~l~gL~P~T~Y~v~V~A~~ 78 (114)
T 3qwq_B 56 VHTATISGLKPGVDYTITVYAVT 78 (114)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEEE
Confidence 35799999999999999987654
No 32
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=39.59 E-value=17 Score=27.00 Aligned_cols=23 Identities=26% Similarity=0.525 Sum_probs=20.0
Q ss_pred CeeEEEeeCCCCCCceeEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
+...|.|.||.|...|.+.|.-.
T Consensus 68 ~~~~~~i~~L~p~t~Y~~~V~A~ 90 (115)
T 1x5z_A 68 PGTSYRLQGLKPNSLYYFRLAAR 90 (115)
T ss_dssp SSSEEEEECCCTTCEEEECEEEE
T ss_pred CCcEEEECCCCCCCeEEEEEEEE
Confidence 45789999999999999988764
No 33
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.90 E-value=21 Score=27.09 Aligned_cols=23 Identities=26% Similarity=0.326 Sum_probs=19.6
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
...|.|.||.|...|.+.|.-.-
T Consensus 70 ~~~~~l~~L~p~t~Y~~~V~A~n 92 (116)
T 2edb_A 70 QRYYSIERLESSSHYVISLKAFN 92 (116)
T ss_dssp CCEEEECSCCSSSBEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEe
Confidence 46899999999999999887543
No 34
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=38.77 E-value=22 Score=26.78 Aligned_cols=24 Identities=25% Similarity=0.387 Sum_probs=20.2
Q ss_pred CeeEEEeeCCCCCCceeEEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
....|.|.||.|...|.+.|.-.-
T Consensus 78 ~~~~~~i~~L~p~t~Y~~~V~A~n 101 (125)
T 1uen_A 78 SKTHGMLPGLEPFSHYTLNVRVVN 101 (125)
T ss_dssp SCSEEEEESCCSSCEEEEEEEEEE
T ss_pred CccEEEeCCCCCCCEEEEEEEEec
Confidence 356899999999999999888643
No 35
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=38.49 E-value=20 Score=27.87 Aligned_cols=22 Identities=27% Similarity=0.462 Sum_probs=19.3
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...+.|.||.|...|.+.|.-.
T Consensus 81 ~t~~~l~gL~P~t~Y~~~V~A~ 102 (121)
T 2ocf_D 81 KSTATISGLKPGVDYTITVYAV 102 (121)
T ss_dssp CCEEEECCCCTTCEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEE
Confidence 4689999999999999988764
No 36
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=38.29 E-value=17 Score=28.31 Aligned_cols=20 Identities=35% Similarity=0.468 Sum_probs=17.0
Q ss_pred eEEEeeCCCCCCceeEEEEE
Q psy14943 85 VKVSIKGLEPDAMYTVLLEF 104 (328)
Q Consensus 85 l~~~vsGLdP~~~Y~v~l~~ 104 (328)
-.|.|+||.|+..|...|-=
T Consensus 61 nSYtI~GL~P~~~YE~qv~S 80 (98)
T 1oww_A 61 NSYTIKGLKPGVVYEGQLIS 80 (98)
T ss_dssp CEEEECSCCSSEEEEEEEEE
T ss_pred ceEEEecCCCCcEEEEEEEE
Confidence 38999999999999976653
No 37
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.16 E-value=21 Score=26.86 Aligned_cols=22 Identities=18% Similarity=0.268 Sum_probs=19.2
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...+.|.||.|...|.+.|.-.
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~ 94 (119)
T 2ee2_A 73 EYSARLENLLPDTQYFIEVGAC 94 (119)
T ss_dssp CSEEEECSCCTTCEEEEEEEEE
T ss_pred EeEEEECCCCCCCEEEEEEEEE
Confidence 4589999999999999988764
No 38
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=38.13 E-value=20 Score=26.99 Aligned_cols=20 Identities=35% Similarity=0.559 Sum_probs=18.0
Q ss_pred EEeeCCCCCCceeEEEEEEE
Q psy14943 87 VSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 87 ~~vsGLdP~~~Y~v~l~~~~ 106 (328)
|.|.||.|...|.+.|.-.-
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~ 83 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLT 83 (107)
T ss_dssp EEEESCCSSCEEEEEEEEEC
T ss_pred EEECCCCCCCEEEEEEEEEC
Confidence 99999999999999888654
No 39
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=38.06 E-value=22 Score=26.74 Aligned_cols=23 Identities=9% Similarity=0.018 Sum_probs=19.9
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
...|.|.||.|...|.+.++-..
T Consensus 66 ~~~~~l~~L~p~t~Y~~~VRa~~ 88 (109)
T 1uc6_A 66 GTAHTITDAYAGKEYIIQVAAKD 88 (109)
T ss_dssp CSEEEETTCCSSSCEEEEEECCB
T ss_pred CCEEEEeCCCCCCEEEEEEEEEe
Confidence 46899999999999999998654
No 40
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=37.98 E-value=23 Score=26.24 Aligned_cols=22 Identities=32% Similarity=0.484 Sum_probs=18.9
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...|.|.||.|...|.+.|.-.
T Consensus 60 ~~~~~v~~L~p~t~Y~frV~A~ 81 (106)
T 1x4x_A 60 GLSYEIKGLSPATTYYCRVQAL 81 (106)
T ss_dssp CSEEEEESCCSSCEEEEEEEEE
T ss_pred cceEEEcCCCCCCEEEEEEEEE
Confidence 4689999999999999887654
No 41
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=37.79 E-value=22 Score=26.34 Aligned_cols=23 Identities=39% Similarity=0.506 Sum_probs=19.6
Q ss_pred CeeEEEeeCCCCCCceeEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
....|.|.||.|...|.+.|.-.
T Consensus 64 ~~~~~~i~~L~p~t~Y~~rV~A~ 86 (105)
T 2haz_A 64 MEGIVTIVGLKPETTYAVRLAAL 86 (105)
T ss_dssp HHSEEEECSCCTTCEEEEEEEEE
T ss_pred CccEEEECCCCCCCEEEEEEEEE
Confidence 45689999999999999987754
No 42
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.60 E-value=23 Score=26.49 Aligned_cols=23 Identities=17% Similarity=0.268 Sum_probs=20.0
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
...|.|.||.|...|.+.|.-.-
T Consensus 72 ~~~~~i~~L~p~t~Y~~~V~A~n 94 (118)
T 2yrz_A 72 QTSVVVEDLLPNHSYVFRVRAQS 94 (118)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEEc
Confidence 56899999999999999887654
No 43
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=37.50 E-value=22 Score=26.40 Aligned_cols=22 Identities=18% Similarity=0.215 Sum_probs=19.2
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...|.|.||.|...|.+.|.-.
T Consensus 70 ~~~~~i~~L~p~t~Y~~~V~A~ 91 (116)
T 1x5g_A 70 SHSYTINGLKKYTEYSFRVVAY 91 (116)
T ss_dssp SSEEEECSCCTTCEEEEEEEEE
T ss_pred CceEEEcCCCCCCEEEEEEEEE
Confidence 4589999999999999988754
No 44
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.25 E-value=24 Score=25.60 Aligned_cols=22 Identities=27% Similarity=0.372 Sum_probs=18.7
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...|.|.||.|...|.+.|.-.
T Consensus 60 ~~~~~i~~L~p~t~Y~~~V~A~ 81 (106)
T 2dju_A 60 TTRYSIGGLSPFSEYAFRVLAV 81 (106)
T ss_dssp SSEEEEESCCTTCEEEEEEEEE
T ss_pred ccEEEEeCCCCCcEEEEEEEEE
Confidence 4579999999999999888654
No 45
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=37.03 E-value=22 Score=26.53 Aligned_cols=23 Identities=22% Similarity=0.366 Sum_probs=19.9
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
...|.|.||.|...|.+.|.-.-
T Consensus 74 ~~~~~i~~L~p~t~Y~~~V~A~n 96 (120)
T 1x5f_A 74 EMQVTIQNLMPATVYIFRVMAQN 96 (120)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEC
Confidence 67899999999999999887643
No 46
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.12 E-value=21 Score=26.15 Aligned_cols=22 Identities=14% Similarity=0.194 Sum_probs=19.3
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...|.|.||.|...|.+.|.-.
T Consensus 60 ~~~~~i~~L~p~t~Y~~~V~A~ 81 (106)
T 2ed8_A 60 GLSYKLEGLKKFTEYSLRFLAY 81 (106)
T ss_dssp SSCEEEESCCTTCEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEE
Confidence 4689999999999999988754
No 47
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=35.75 E-value=25 Score=25.95 Aligned_cols=22 Identities=14% Similarity=0.176 Sum_probs=19.0
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...|.|.||.|...|.+.|.-.
T Consensus 63 ~~~~~v~~L~p~t~Y~frV~A~ 84 (109)
T 1x5x_A 63 DLAYTVKNLRRSTKYKFKVIAY 84 (109)
T ss_dssp CSEEEEESCCSSCEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEE
Confidence 4689999999999999887654
No 48
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=35.53 E-value=24 Score=25.96 Aligned_cols=23 Identities=26% Similarity=0.278 Sum_probs=19.5
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
...|.|.||.|...|.+.|.-.-
T Consensus 62 ~~~~~l~~L~p~t~Y~~~V~A~n 84 (108)
T 2dm4_A 62 SNFTEIKNLLVNTLYTVRVAAVT 84 (108)
T ss_dssp SSEEEECSCCSSCEEEEEEEEEE
T ss_pred ccEEEeCCCCCCCEEEEEEEEEC
Confidence 34899999999999999887653
No 49
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=35.31 E-value=26 Score=26.22 Aligned_cols=24 Identities=17% Similarity=0.318 Sum_probs=19.9
Q ss_pred CeeEEEeeCCCCCCceeEEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
....|.|.||.|...|.+.|.-.-
T Consensus 72 ~~~~~~i~~L~p~t~Y~~~V~A~n 95 (119)
T 1wfn_A 72 VTLEYRVTGLTALTTYTIEVAAMT 95 (119)
T ss_dssp SCCEEEEESCCTTCEEEEEEEEEC
T ss_pred CceEEEEcCCCCCCEEEEEEEEEc
Confidence 356899999999999999887543
No 50
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=34.86 E-value=26 Score=26.67 Aligned_cols=23 Identities=17% Similarity=0.397 Sum_probs=19.8
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
...|.|.||.|...|.+.|.-.-
T Consensus 84 ~~~~~i~~L~p~t~Y~~~V~A~n 106 (130)
T 1wfo_A 84 ARQYTATGLKPESVYLFRITAQT 106 (130)
T ss_dssp CCEEEEESCCSSSEEEEEEEEEC
T ss_pred ceEEEEcCCCCCCEEEEEEEEEe
Confidence 56899999999999999887653
No 51
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=34.06 E-value=22 Score=26.21 Aligned_cols=23 Identities=17% Similarity=0.434 Sum_probs=19.7
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
...|.|.||.|...|.+.|.-.-
T Consensus 65 ~~~~~i~~L~p~t~Y~~~V~A~n 87 (111)
T 1x5l_A 65 TTRATVSGLKPGTRYVFQVRART 87 (111)
T ss_dssp SSEEEECSCCTTCEEEECEEEEE
T ss_pred CCEEEEcCCCCCCEEEEEEEEEe
Confidence 45899999999999999887654
No 52
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.89 E-value=27 Score=25.77 Aligned_cols=22 Identities=23% Similarity=0.256 Sum_probs=19.1
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...|.|.||.|...|.+.|.-.
T Consensus 68 ~~~~~i~~L~p~t~Y~~~V~A~ 89 (114)
T 2ede_A 68 RLTHQIMDLNLDTMYYFRIQAR 89 (114)
T ss_dssp CCEEEECSCCSSCEEEEEEEEE
T ss_pred ceEEEEcCCCCCCEEEEEEEEE
Confidence 4589999999999999888764
No 53
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=33.67 E-value=28 Score=25.91 Aligned_cols=22 Identities=18% Similarity=0.321 Sum_probs=18.7
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...+.|.||+|...|.+.|.-.
T Consensus 64 ~~~~~l~~L~p~t~Y~v~V~A~ 85 (102)
T 3n1f_C 64 KQWHMIGHLQPETSYDIKMQCF 85 (102)
T ss_dssp CSEEEECSCCTTCEEEEEEEEE
T ss_pred ceEEECCCCCCCCEEEEEEEEE
Confidence 4578999999999999988753
No 54
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.44 E-value=34 Score=26.42 Aligned_cols=24 Identities=13% Similarity=0.368 Sum_probs=20.0
Q ss_pred CeeEEEeeCCCCCCceeEEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
+...|.|.||.|...|.+.|.-+-
T Consensus 78 ~~~~~~v~gL~p~t~Y~frV~A~N 101 (127)
T 2dmk_A 78 KQNHYTVHGLQSGTRYIFIVKAIN 101 (127)
T ss_dssp CSSEEEEESCCSSCEEEEEEEEEE
T ss_pred cCCeEEECCCCCCCEEEEEEEEEe
Confidence 456899999999999998876554
No 55
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.27 E-value=25 Score=26.89 Aligned_cols=21 Identities=24% Similarity=0.325 Sum_probs=18.8
Q ss_pred eEEEeeCCCCCCceeEEEEEE
Q psy14943 85 VKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 85 l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
..|.|.||.|...|.+.|.-.
T Consensus 60 t~~~l~~L~p~T~Y~v~V~A~ 80 (108)
T 2ee3_A 60 TSAMLGPLSSSTTYTVRVTCL 80 (108)
T ss_dssp CEEEECSCCSSCEEEEEEEEE
T ss_pred CEEEcCCCCCCCEEEEEEEEE
Confidence 589999999999999988765
No 56
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.16 E-value=30 Score=26.21 Aligned_cols=24 Identities=21% Similarity=0.154 Sum_probs=20.3
Q ss_pred CeeEEEeeCCCCCCceeEEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
....|.|.||.|...|.+.|.-.-
T Consensus 77 ~~~~~~i~~L~p~t~Y~~~V~A~n 100 (134)
T 2edx_A 77 EHSSWDLVGLEKWTEYRVWVRAHT 100 (134)
T ss_dssp TCSEEEEESCCTTCEEEEEEEEEE
T ss_pred CccEEEeCCCCCCCEEEEEEEEEc
Confidence 357899999999999999887654
No 57
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=33.07 E-value=33 Score=25.74 Aligned_cols=24 Identities=13% Similarity=0.238 Sum_probs=20.1
Q ss_pred CeeEEEeeCCCCCCceeEEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
+...|.|.||.|...|.+.|.-.-
T Consensus 73 ~~~~~~v~~L~p~t~Y~frV~A~n 96 (120)
T 2crm_A 73 ATREHLCDRLNPGCFYRLRVYCIS 96 (120)
T ss_dssp SCSEEEECSCCTTSCEEEEEEEEE
T ss_pred cccEEEECCCCCCCEEEEEEEEEc
Confidence 467899999999999998886543
No 58
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=31.80 E-value=21 Score=27.57 Aligned_cols=22 Identities=23% Similarity=0.448 Sum_probs=19.1
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...|.|.||.|...|.+.|.-.
T Consensus 80 ~~~~~i~~L~p~t~Y~~~V~A~ 101 (126)
T 1x5i_A 80 QRYYTIENLDPSSHYVITLKAF 101 (126)
T ss_dssp CCEEEECSCCSSCEECCEEEEE
T ss_pred eeEEEEeCCCCCCEEEEEEEEE
Confidence 4689999999999999988754
No 59
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.66 E-value=15 Score=27.45 Aligned_cols=22 Identities=23% Similarity=0.413 Sum_probs=18.5
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...+.|.||.|...|.+.|.-.
T Consensus 60 ~~~~~l~~L~p~t~Y~~~V~A~ 81 (105)
T 2ekj_A 60 RSHVTLPDLQAATKYRVLVSAI 81 (105)
T ss_dssp SSEEEECSCCSSCCCBCBBCBB
T ss_pred cCEEEeCCCCCCCEEEEEEEEE
Confidence 4689999999999999877643
No 60
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.57 E-value=36 Score=25.48 Aligned_cols=23 Identities=13% Similarity=0.291 Sum_probs=19.0
Q ss_pred CeeEEEeeCCCCCCceeEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
....|.|.||.|...|.+.|.-.
T Consensus 63 ~~~~~~v~~L~p~t~Y~frV~A~ 85 (110)
T 2db8_A 63 KETMCTVDGLHFNSTYNARVKAF 85 (110)
T ss_dssp SCSCEEEECCCSSSCCEEEEEEE
T ss_pred CcCEEEECCCCCCCEEEEEEEEE
Confidence 34579999999999999887654
No 61
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=31.51 E-value=32 Score=25.63 Aligned_cols=23 Identities=30% Similarity=0.450 Sum_probs=19.5
Q ss_pred CeeEEEeeCCCCCCceeEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
....|.|.||.|...|.+.|.-.
T Consensus 74 ~~~~~~v~~L~p~t~Y~frV~A~ 96 (121)
T 1wf5_A 74 KATSVTVKGLVPARSYQFRLCAV 96 (121)
T ss_dssp TCCEEEEESCCTTCEEEEEEEEE
T ss_pred CccEEEECCcCCCCEEEEEEEEE
Confidence 35689999999999999888764
No 62
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.50 E-value=17 Score=26.34 Aligned_cols=22 Identities=23% Similarity=0.552 Sum_probs=18.8
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...|.|.||.|...|.+.|.-.
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~ 84 (103)
T 2edy_A 63 DTRFTLTGLKPDTTYDIKVRAW 84 (103)
T ss_dssp SSCCEECSCCTTCCEEEECCEE
T ss_pred cceEEEcCCCCCCEEEEEEEEE
Confidence 4578999999999999888654
No 63
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.40 E-value=24 Score=26.26 Aligned_cols=24 Identities=21% Similarity=0.257 Sum_probs=20.6
Q ss_pred CeeEEEeeCCCCCCceeEEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
....|.|.||.|...|.+.|.-.-
T Consensus 74 ~~~~~~i~~L~p~t~Y~~~V~A~n 97 (121)
T 2dlh_A 74 DSQITTIGNLVPQKTYSVKVLAFT 97 (121)
T ss_dssp SCSEECCBSCCSSCEEEEEEEEEE
T ss_pred CceEEEecCCCCCCEEEEEEEEEe
Confidence 566899999999999999887654
No 64
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=30.58 E-value=26 Score=26.63 Aligned_cols=24 Identities=21% Similarity=0.320 Sum_probs=20.5
Q ss_pred CeeEEEeeCCCCCCceeEEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
....|.|.||.|...|.+.|.-.-
T Consensus 75 ~~~~~~i~~L~p~t~Y~~~V~A~n 98 (132)
T 1x5h_A 75 TQLSQLIEGLDRGTEYNFRVAALT 98 (132)
T ss_dssp TCCEEEEECCCSSCEEEEECEEEE
T ss_pred CccEEEeCCCCCCCEEEEEEEEEc
Confidence 457899999999999999887654
No 65
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=30.39 E-value=33 Score=26.18 Aligned_cols=24 Identities=38% Similarity=0.495 Sum_probs=20.1
Q ss_pred CeeEEEeeCCCCCCceeEEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
....|.|.||.|...|.+.|.-.-
T Consensus 65 ~~~~~~i~~L~p~t~Y~~rV~A~n 88 (122)
T 2e3v_A 65 MEGIVTIVGLKPETTYAVRLAALN 88 (122)
T ss_dssp TTTEEEECSCCTTCEEEEEEEEEE
T ss_pred ccceEEeCCCCCCCEEEEEEEEEe
Confidence 356899999999999999887553
No 66
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=30.08 E-value=39 Score=24.98 Aligned_cols=22 Identities=14% Similarity=0.028 Sum_probs=19.1
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...|.|.||.|...|.+.|.-.
T Consensus 65 ~~~~~v~~L~p~t~Y~frV~A~ 86 (111)
T 1x5y_A 65 RCGFTVKDLPTGARILFRVVGV 86 (111)
T ss_dssp SSEEEEECCCTTCCEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEE
Confidence 5689999999999999887754
No 67
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.87 E-value=29 Score=26.03 Aligned_cols=23 Identities=17% Similarity=0.251 Sum_probs=19.3
Q ss_pred CeeEEEeeCCCCCCceeEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
....|.|.||.|...|.+.|.-.
T Consensus 83 ~~~~~~i~~L~p~t~Y~~~V~A~ 105 (124)
T 2ed9_A 83 NNLWYLFTGLEKGSQYSFQVSAM 105 (124)
T ss_dssp SCSEEEEECCCSSCEEEECEEEE
T ss_pred CcCEEEEcCCCCCCEEEEEEEEE
Confidence 35689999999999999888754
No 68
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=29.86 E-value=35 Score=25.27 Aligned_cols=23 Identities=17% Similarity=0.573 Sum_probs=19.2
Q ss_pred CeeEEEeeCCCCCCceeEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
....|.|.||.|...|.+.|.-.
T Consensus 70 ~~~~~~i~~L~p~t~Y~frV~A~ 92 (117)
T 1uem_A 70 KTTLYTVRGLRPNTIYLFMVRAI 92 (117)
T ss_dssp CSSEEEECSCCTTCEEEEEEEEE
T ss_pred CcCEEEECCCCCCCEEEEEEEEE
Confidence 35589999999999999888654
No 69
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=29.80 E-value=46 Score=25.33 Aligned_cols=23 Identities=22% Similarity=0.238 Sum_probs=19.1
Q ss_pred CeeEEEeeCCCCCCceeEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
....|.|.||.|...|.+.|.-+
T Consensus 66 ~~~~~~v~~L~p~t~Y~frV~A~ 88 (112)
T 1bpv_A 66 LENEFTVSGLTEDAAYEFRVIAK 88 (112)
T ss_dssp CSSEEEECSCCSSCCEEEEEEEE
T ss_pred ccCEEEECCCCCCCEEEEEEEEE
Confidence 35689999999999999877654
No 70
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.73 E-value=35 Score=25.11 Aligned_cols=23 Identities=30% Similarity=0.338 Sum_probs=19.5
Q ss_pred CeeEEEeeCCCCCCceeEEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
....|.|.||.|...|.+.|.-.
T Consensus 63 ~~~~~~v~~L~p~t~Y~frV~A~ 85 (110)
T 2yuw_A 63 DKTKFTITGLPTDAKIFVRVKAV 85 (110)
T ss_dssp CSSEEEECSCCTTCEEEEEEEEE
T ss_pred ccCEEEECCCCCCCEEEEEEEEE
Confidence 45689999999999999887654
No 71
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=29.25 E-value=37 Score=25.54 Aligned_cols=22 Identities=32% Similarity=0.437 Sum_probs=19.0
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...|.|.||.|...|.+.+.-.
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A~ 96 (121)
T 1x4z_A 75 RLSVEITGLEKGISYKFRVRAL 96 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEE
Confidence 4689999999999999888654
No 72
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=28.77 E-value=87 Score=26.45 Aligned_cols=23 Identities=26% Similarity=0.431 Sum_probs=19.9
Q ss_pred eEEEeeCCCCCCceeEEEEEEEc
Q psy14943 85 VKVSIKGLEPDAMYTVLLEFLQI 107 (328)
Q Consensus 85 l~~~vsGLdP~~~Y~v~l~~~~~ 107 (328)
-.+.|.||.|...|.+.++....
T Consensus 160 ~~~~i~~L~p~t~Ycv~Vra~~~ 182 (206)
T 4doh_B 160 IPVHLETMEPGAAYCVKAQTFVK 182 (206)
T ss_dssp SEEEEEECCSSSCEEEEEEEEEG
T ss_pred eEEEEeCCCCCCcEEEEEEEEec
Confidence 47899999999999999987654
No 73
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=28.72 E-value=34 Score=28.49 Aligned_cols=22 Identities=27% Similarity=0.463 Sum_probs=19.2
Q ss_pred eEEEeeCCCCCCceeEEEEEEE
Q psy14943 85 VKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 85 l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
..|.|+||.|...|.+.|.-..
T Consensus 157 t~~~l~gL~p~t~Y~~~V~A~~ 178 (195)
T 2qbw_A 157 STATISGLKPGVDYTITVYAYS 178 (195)
T ss_dssp SEEEECSCCTTCEEEEEEEEES
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 6899999999999999887653
No 74
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=28.43 E-value=49 Score=25.87 Aligned_cols=23 Identities=26% Similarity=0.566 Sum_probs=19.4
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
...|.|.||.|...|.+.|.-+-
T Consensus 74 ~t~~~v~gL~p~t~Y~frV~A~n 96 (120)
T 1wfu_A 74 ATRHVVEGLEPRTLYKFRLKVTS 96 (120)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEC
T ss_pred ccEEEECCCCCCCEEEEEEEEEC
Confidence 35799999999999998887654
No 75
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.79 E-value=25 Score=26.15 Aligned_cols=23 Identities=26% Similarity=0.533 Sum_probs=19.7
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
...|.|.||.|...|.+.|.-.-
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n 95 (119)
T 2ed7_A 73 SLQLTVGNLKPEAMYTFRVVAYN 95 (119)
T ss_dssp CCEEEECSCCSSSEEEECCEEEE
T ss_pred ceEEEeCCCCCCCEEEEEEEEEc
Confidence 67899999999999998877643
No 76
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=26.60 E-value=39 Score=26.35 Aligned_cols=21 Identities=10% Similarity=0.131 Sum_probs=18.9
Q ss_pred eeEEEeeCCCCCCceeEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEF 104 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~ 104 (328)
...+.|.||.|...|.+.|.-
T Consensus 74 ~~~~~l~~L~p~T~Y~~~V~A 94 (120)
T 1ujt_A 74 ERSAVLVNLKKGVTYEIKVRP 94 (120)
T ss_dssp CCEEEEESCCSSEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEE
Confidence 568999999999999998875
No 77
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=26.52 E-value=38 Score=35.44 Aligned_cols=42 Identities=19% Similarity=0.450 Sum_probs=28.9
Q ss_pred chhHhhhcCCCCeeEEEeC---CCcCCCeeEEEeeCCCCCCceeE
Q psy14943 59 LDLWLKFQSHTNEMIVTKN---GRRMFPVVKVSIKGLEPDAMYTV 100 (328)
Q Consensus 59 ~~lW~~F~~~~~EMIVtk~---GRrmFP~l~~~vsGLdP~~~Y~v 100 (328)
...|.-..+-+.|-+|.-- .+.--|...+++.||||++.|.+
T Consensus 651 ~~a~~~vs~d~~~avv~~~~~~~~~~~~~~~~rl~GLdp~~~Y~v 695 (745)
T 3mi6_A 651 VTSWQVVSDDQKQAIAARYQLLNHPNAPYTRFYFKGLRPNQRYQI 695 (745)
T ss_dssp EEEEEEECTTSSEEEEEEEESSCCSSCCCEEECCCSCCTTCEEEE
T ss_pred cEEEEEEcCCCCEEEEEEEEecccCCCCccceECCCCCCCCeEEE
Confidence 3455555666778877432 23334556799999999999997
No 78
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=26.26 E-value=31 Score=25.52 Aligned_cols=22 Identities=23% Similarity=0.362 Sum_probs=18.7
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...|.|.||.|...|.+.|.-.
T Consensus 64 ~~~~~v~~L~p~t~Y~frV~A~ 85 (110)
T 2crz_A 64 EVECTVSSLLPGKTYSFRLRAA 85 (110)
T ss_dssp CSEEEEESCCTTCEEEECCEEE
T ss_pred cEEEEECCcCCCCEEEEEEEEE
Confidence 5689999999999999877654
No 79
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=26.25 E-value=35 Score=25.44 Aligned_cols=22 Identities=18% Similarity=0.093 Sum_probs=18.6
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...|.|.||.|...|.+.|.-.
T Consensus 72 ~~~~~v~~L~p~t~Y~frV~A~ 93 (118)
T 1x3d_A 72 QKQFKITKLSPAMGCKFRLSAR 93 (118)
T ss_dssp CSEEEEESCCTTCEEEEECCEE
T ss_pred CcEEEeCCCCCCCEEEEEEEEE
Confidence 4689999999999999877654
No 80
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=26.01 E-value=1e+02 Score=26.41 Aligned_cols=24 Identities=25% Similarity=0.358 Sum_probs=20.0
Q ss_pred eeEEEeeCCCCCCceeEEEEEEEc
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQI 107 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~~ 107 (328)
...+.|.||+|...|++.++..-.
T Consensus 172 ~~~~~l~~L~p~t~Ycv~V~a~~~ 195 (221)
T 4doh_R 172 NHTLVLTWLEPNTLYCVHVESFVP 195 (221)
T ss_dssp SSEEEECSCCTTCEEEEEEEEECS
T ss_pred CcEEEEecCCCCCcEEEEEEEEEc
Confidence 447889999999999999998543
No 81
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=25.97 E-value=45 Score=23.58 Aligned_cols=22 Identities=27% Similarity=0.380 Sum_probs=18.7
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...|.+.||.|...|.+.+.-.
T Consensus 50 ~~~~~~~~L~~~t~Y~~~V~A~ 71 (88)
T 1k85_A 50 GTTATISGLAADTSYTFTVKAK 71 (88)
T ss_dssp SSEEEECCCCSSCEEEEEEEEE
T ss_pred CCEEEeCCCCCCCEEEEEEEEE
Confidence 3589999999999999877754
No 82
>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=25.40 E-value=23 Score=26.85 Aligned_cols=22 Identities=36% Similarity=0.508 Sum_probs=19.0
Q ss_pred eEEEeeCCCCCCceeEEEEEEE
Q psy14943 85 VKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 85 l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
..|.|+||.|.-.|.+.|.-+.
T Consensus 38 nSYtIsGLkPGvtYegQLisV~ 59 (89)
T 1q38_A 38 NSYTIKGLKPGVVYEGQLISIQ 59 (89)
T ss_dssp SCCCCCCCCTTCCEEEEEEEEC
T ss_pred ceEEEeccCCCcEEEEEEEeee
Confidence 5899999999999999887554
No 83
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=23.88 E-value=46 Score=25.85 Aligned_cols=22 Identities=14% Similarity=0.080 Sum_probs=18.1
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
.-.|.|.||.|...|.+.|.-+
T Consensus 63 ~~~~~l~~L~p~t~Y~frV~A~ 84 (114)
T 2kbg_A 63 KDHIILEHLQWTMGYEVQITAA 84 (114)
T ss_dssp TCCEEECCCCTTCCEEEEEEEE
T ss_pred cCEEEEcCCCCCCEEEEEEEEE
Confidence 3479999999999999877543
No 84
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=23.56 E-value=49 Score=26.99 Aligned_cols=23 Identities=26% Similarity=0.320 Sum_probs=19.5
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
...|.|.||.|...|.+.|.-.-
T Consensus 164 ~~~~~i~~L~p~t~Y~~~V~A~~ 186 (201)
T 2ha1_A 164 ATSVNIPDLLPGRKYIVNVYQIS 186 (201)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEc
Confidence 46899999999999999887654
No 85
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.76 E-value=38 Score=25.72 Aligned_cols=22 Identities=18% Similarity=0.063 Sum_probs=18.7
Q ss_pred eeEEEeeCCCCCCceeEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
...|.|.||.|...|.+.|.-.
T Consensus 78 ~~~~~l~~L~p~t~Y~~~V~A~ 99 (124)
T 2dbj_A 78 GSRARISVQVHNATCTVRIAAV 99 (124)
T ss_dssp TSCEEEECCCSSSEEEECEEEE
T ss_pred cceEEecCCCCCCEEEEEEEEE
Confidence 4589999999999999888754
No 86
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=22.44 E-value=52 Score=26.33 Aligned_cols=22 Identities=18% Similarity=0.220 Sum_probs=19.3
Q ss_pred CeeEEEeeCCCCCCceeEEEEE
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEF 104 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~ 104 (328)
....|.|.||.|...|.+.|.-
T Consensus 145 ~~~~~~i~~L~p~t~Y~~~V~A 166 (186)
T 1qr4_A 145 SKTRTKLVKLVPGVDYNVNIIS 166 (186)
T ss_dssp TCCEEEECSCCSSCEEEEEEEE
T ss_pred CcCEEEEcCCCCCCEEEEEEEE
Confidence 3468999999999999998876
No 87
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=22.32 E-value=53 Score=27.05 Aligned_cols=23 Identities=22% Similarity=0.235 Sum_probs=19.6
Q ss_pred eeEEEeeCCCCCCceeEEEEEEE
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
...|.|.||.|...|.+.|.-.-
T Consensus 167 ~~~~~i~~L~p~t~Y~~~V~A~~ 189 (203)
T 2gee_A 167 DNAVVLTNLLPGTEYVVSVSSVY 189 (203)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEec
Confidence 46899999999999999887643
No 88
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=22.02 E-value=50 Score=25.20 Aligned_cols=21 Identities=19% Similarity=0.368 Sum_probs=17.8
Q ss_pred eEEEeeCCCCCCceeEEEEEE
Q psy14943 85 VKVSIKGLEPDAMYTVLLEFL 105 (328)
Q Consensus 85 l~~~vsGLdP~~~Y~v~l~~~ 105 (328)
..|.|.||.|...|.+.|.-+
T Consensus 71 ~~~~v~~L~p~t~Y~FRV~A~ 91 (115)
T 2ic2_A 71 FTASVTDLKPQHTYRFRILAV 91 (115)
T ss_dssp EEEEECSCCSSEEEEEEEEEE
T ss_pred eEEEeCCCCCCCEEEEEEEEE
Confidence 478999999999999877643
No 89
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=21.04 E-value=90 Score=26.00 Aligned_cols=24 Identities=21% Similarity=0.256 Sum_probs=21.0
Q ss_pred eEEEeeCCCCCCceeEEEEEEEcc
Q psy14943 85 VKVSIKGLEPDAMYTVLLEFLQIE 108 (328)
Q Consensus 85 l~~~vsGLdP~~~Y~v~l~~~~~D 108 (328)
..+.+.||+|...|.+.|+-....
T Consensus 167 ~~~~l~~L~p~t~Y~vqVRa~~~~ 190 (206)
T 3v6o_A 167 KSVSLPVPDLCAVYAVQVRCKRLD 190 (206)
T ss_dssp CEEEECCSCTTSCEEEEEEEEETT
T ss_pred eeEEeecCCCCCEEEEEEEEecCC
Confidence 468999999999999999987754
No 90
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=20.81 E-value=74 Score=26.16 Aligned_cols=24 Identities=17% Similarity=0.349 Sum_probs=20.8
Q ss_pred eeEEEeeCCCCCCceeEEEEEEEc
Q psy14943 84 VVKVSIKGLEPDAMYTVLLEFLQI 107 (328)
Q Consensus 84 ~l~~~vsGLdP~~~Y~v~l~~~~~ 107 (328)
...|.|.||.|...|.+.|+-...
T Consensus 171 ~~~~~l~~L~p~t~Y~~~Vra~~~ 194 (215)
T 1cd9_B 171 KDQFELCGLHQAPVYTLQMRCIRS 194 (215)
T ss_dssp EEEEEECCCCSCSCEEEEEEEEES
T ss_pred ceEEEEcCCCCCCEEEEEEEeeEC
Confidence 468999999999999999987654
No 91
>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}
Probab=20.32 E-value=60 Score=27.69 Aligned_cols=30 Identities=10% Similarity=0.115 Sum_probs=23.7
Q ss_pred CeeEEEeeCCCCCCceeEEEEEEEccCcce
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFLQIEQKRW 112 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~~~D~~ry 112 (328)
+...+.+.||.|.+.|.+.|+-.......|
T Consensus 162 ~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~ 191 (219)
T 3tgx_A 162 RSVSLLPLEFRKDSSYELQVRAGPMPGSSY 191 (219)
T ss_dssp SEEEECTTSSCSSCEEEEEEEEEECTTSSC
T ss_pred CEEEEEeccCCCCCEEEEEEEEeeCCCCCC
Confidence 355677889999999999999987654444
No 92
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=20.06 E-value=95 Score=25.85 Aligned_cols=26 Identities=19% Similarity=0.157 Sum_probs=21.5
Q ss_pred CeeEEEeeCCCCCCceeEEEEEEEcc
Q psy14943 83 PVVKVSIKGLEPDAMYTVLLEFLQIE 108 (328)
Q Consensus 83 P~l~~~vsGLdP~~~Y~v~l~~~~~D 108 (328)
+.-.+.|.||+|...|++.++..-.+
T Consensus 153 ~~~~~~l~~L~p~t~Ycv~V~a~~~~ 178 (201)
T 3lqm_A 153 QYDFEVLRNLEPWTTYCVQVRGFLPD 178 (201)
T ss_dssp SSSEEEECSCCTTCEEEEEEEEEETT
T ss_pred cCceEEEecCCCCCcEEEEEEEEecc
Confidence 44579999999999999999976543
No 93
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=20.02 E-value=71 Score=25.74 Aligned_cols=22 Identities=14% Similarity=0.306 Sum_probs=19.4
Q ss_pred eEEEeeCCCCCCceeEEEEEEE
Q psy14943 85 VKVSIKGLEPDAMYTVLLEFLQ 106 (328)
Q Consensus 85 l~~~vsGLdP~~~Y~v~l~~~~ 106 (328)
..+.|.||.|...|.+.|.-.-
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n 103 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEY 103 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEE
T ss_pred cEEEEcCCCCCCEEEEEEEEEe
Confidence 6899999999999999988653
Done!