BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy14945
         (629 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q3MHL7|TCPZ_BOVIN T-complex protein 1 subunit zeta OS=Bos taurus GN=CCT6A PE=1 SV=3
          Length = 531

 Score =  334 bits (857), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 179/357 (50%), Positives = 236/357 (66%), Gaps = 40/357 (11%)

Query: 160 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIA 219
           KS+    L++G+VL+HGARHPDM K V++A+ILTCN+S+EYEK+          +  G  
Sbjct: 199 KSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTE---------VNSGFF 249

Query: 220 NQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCST 279
            +       L+      ++D         V  I EL K+                  C  
Sbjct: 250 YKSAEEREKLVKAERKFIED--------RVKKIIELKKKV-----------------CGD 284

Query: 280 SDR-----YRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHL 334
           SD+      + GIDP SLD  A+EGIIALRRAKRRNMERL+LACGG A+NS++ L P  L
Sbjct: 285 SDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMERLTLACGGIALNSLDDLNPDCL 344

Query: 335 GYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDD 394
           G+AG V+E+ LGEEKFTF+E+C NP+SVT+L+KGPNKHTL Q KDA+RDGLRA+KN IDD
Sbjct: 345 GHAGLVYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDD 404

Query: 395 GAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLV 454
           G VVPGAGA EVA   AL  YK +VKG+++LG+QA+A+ALLIIPK +A NSGFD Q+TLV
Sbjct: 405 GCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLV 464

Query: 455 KLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITE 511
           K+Q    E+ G  VGVD+N+GE +    AGI+DN  VK+Q+++S  +   +  ++ E
Sbjct: 465 KVQAEHSES-GQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDE 520



 Score = 89.0 bits (219), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 48/53 (90%)

Query: 1   MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           MVE+MEMKHK+  D+ L++G+VLDHGARHPDM K V++A+ILTCN+S+EYEK+
Sbjct: 190 MVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKT 242



 Score = 79.7 bits (195), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 36/45 (80%), Positives = 42/45 (93%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265
           QIQHPTASLIA+ +TA DD+TGDGTTS VL+IGELLKQAD+YI+E
Sbjct: 68  QIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISE 112



 Score = 79.3 bits (194), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 38/62 (61%), Positives = 47/62 (75%)

Query: 499 WIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLL 558
           +I  GLHPR+ITEGF  A+ KAL+ LE +K++    RE L+DVARTSLRTKV  ELAD+L
Sbjct: 109 YISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADVL 168

Query: 559 AE 560
            E
Sbjct: 169 TE 170



 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 40/46 (86%)

Query: 118 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
           KS+    L++G+VL+HGARHPDM K V++A+ILTCN+S+EYEK++V
Sbjct: 199 KSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEV 244



 Score = 63.9 bits (154), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/36 (69%), Positives = 34/36 (94%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           G+VL+HGARHPDM K V++A+ILTCN+S+EYEK++V
Sbjct: 209 GLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEV 244



 Score = 57.0 bits (136), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           NSGFD Q+TLVK+Q    E+ G  VGVD+N+GE +    AGI+DN  VK+Q+++S
Sbjct: 454 NSGFDLQETLVKVQAEHSES-GQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHS 507


>sp|P80317|TCPZ_MOUSE T-complex protein 1 subunit zeta OS=Mus musculus GN=Cct6a PE=1 SV=3
          Length = 531

 Score =  330 bits (845), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 175/347 (50%), Positives = 230/347 (66%), Gaps = 40/347 (11%)

Query: 160 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIA 219
           KS+    L++G+VL+HGARHPDM K V+NA+ILTCN+S+EYEK+          +  G  
Sbjct: 199 KSETDTSLIRGLVLDHGARHPDMKKRVENAYILTCNVSLEYEKTE---------VNSGFF 249

Query: 220 NQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCST 279
            +       L+      ++D         V  I EL K+                  C  
Sbjct: 250 YKSAEEREKLVKAERKFIED--------RVKKIIELKKKV-----------------CGD 284

Query: 280 SDR-----YRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHL 334
           SD+      + GIDP SLD  A+EGI+ALRRAKRRNMERL+LACGG A+NS + L P  L
Sbjct: 285 SDKGFVVINQKGIDPFSLDALAKEGIVALRRAKRRNMERLTLACGGIALNSFDDLNPDCL 344

Query: 335 GYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDD 394
           G+AG V+E+ LGEEKFTF+E+C NP+SVT+L+KGPNKHTL Q KDA+RDGLRA+KN IDD
Sbjct: 345 GHAGLVYEYTLGEEKFTFIEKCNNPRSVTLLVKGPNKHTLTQIKDAIRDGLRAVKNAIDD 404

Query: 395 GAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLV 454
           G VVPGAGA EVA   AL  YK +VKG+++LG+QA+A+ALLIIPK +A NSGFD Q+TLV
Sbjct: 405 GCVVPGAGAVEVALAEALIKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLV 464

Query: 455 KLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWII 501
           K+Q    E+ G  VGVD+++GE +     G++DN  VK+Q+++S  +
Sbjct: 465 KVQAEHSES-GQLVGVDLSTGEPMVAAEMGVWDNYCVKKQLLHSCTV 510



 Score = 90.9 bits (224), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 37/53 (69%), Positives = 48/53 (90%)

Query: 1   MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           MVE+MEMKHK+  D+ L++G+VLDHGARHPDM K V+NA+ILTCN+S+EYEK+
Sbjct: 190 MVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVENAYILTCNVSLEYEKT 242



 Score = 80.1 bits (196), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 53/72 (73%), Gaps = 2/72 (2%)

Query: 499 WIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLL 558
           +I  GLHPR+ITEGF  A+ KAL+ LE +K++    RE L+DVARTSLRTKV  ELAD+L
Sbjct: 109 YISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADVL 168

Query: 559 AEP--NSVPSLR 568
            E   +S+ ++R
Sbjct: 169 TEAVVDSILAIR 180



 Score = 79.7 bits (195), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 36/45 (80%), Positives = 42/45 (93%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265
           QIQHPTASLIA+ +TA DD+TGDGTTS VL+IGELLKQAD+YI+E
Sbjct: 68  QIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISE 112



 Score = 70.1 bits (170), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 40/46 (86%)

Query: 118 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
           KS+    L++G+VL+HGARHPDM K V+NA+ILTCN+S+EYEK++V
Sbjct: 199 KSETDTSLIRGLVLDHGARHPDMKKRVENAYILTCNVSLEYEKTEV 244



 Score = 65.9 bits (159), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/36 (72%), Positives = 34/36 (94%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           G+VL+HGARHPDM K V+NA+ILTCN+S+EYEK++V
Sbjct: 209 GLVLDHGARHPDMKKRVENAYILTCNVSLEYEKTEV 244



 Score = 52.4 bits (124), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 1/55 (1%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           NSGFD Q+TLVK+Q    E+ G  VGVD+++GE +     G++DN  VK+Q+++S
Sbjct: 454 NSGFDLQETLVKVQAEHSES-GQLVGVDLSTGEPMVAAEMGVWDNYCVKKQLLHS 507


>sp|Q5ZJ54|TCPZ_CHICK T-complex protein 1 subunit zeta OS=Gallus gallus GN=CCT6 PE=1 SV=3
          Length = 530

 Score =  330 bits (845), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 173/347 (49%), Positives = 234/347 (67%), Gaps = 40/347 (11%)

Query: 160 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIA 219
           KS+    L++G+VL+HGARHPDM K V++A+ILTCN+S+EYEK+          ++ G  
Sbjct: 198 KSETDTTLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTE---------VSAGFF 248

Query: 220 NQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCST 279
            +       L+      ++D         V  I +L ++                  C  
Sbjct: 249 YKSAEEREKLVKAERKFIED--------RVSKIIDLKRRV-----------------CGD 283

Query: 280 SDR-----YRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHL 334
           SD+      + GIDP SLD  A+EGI+ALRRAKRRNMERL+LACGGTAMNSVE L P  L
Sbjct: 284 SDKGFIVINQKGIDPFSLDALAKEGIVALRRAKRRNMERLTLACGGTAMNSVEDLTPDCL 343

Query: 335 GYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDD 394
           G+AG V+E+ LGEEK+TF+E+C NP+SVT+L++GPNKHTL Q KDAVRDGLRA+KN I+D
Sbjct: 344 GHAGLVYEYTLGEEKYTFIEKCDNPRSVTLLIRGPNKHTLTQIKDAVRDGLRAVKNAIED 403

Query: 395 GAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLV 454
           G V+PGAGA EVA  +AL  +K  VKG+++LG+QA+A+ALLIIPK +A NSG+D Q+TLV
Sbjct: 404 GCVIPGAGALEVAVANALVKHKPNVKGRAQLGVQAFADALLIIPKVLAQNSGYDPQETLV 463

Query: 455 KLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWII 501
           K+Q    E+ G   GVD+N+GE +   +AGI+DN  VK+Q+++S  +
Sbjct: 464 KVQAEHAES-GQLTGVDLNTGEPMVAAAAGIWDNYNVKKQLLHSCTV 509



 Score = 89.0 bits (219), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 48/53 (90%)

Query: 1   MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           MVE+MEMKHK+  D+ L++G+VLDHGARHPDM K V++A+ILTCN+S+EYEK+
Sbjct: 189 MVEIMEMKHKSETDTTLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKT 241



 Score = 79.7 bits (195), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 53/72 (73%), Gaps = 2/72 (2%)

Query: 499 WIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLL 558
           +I  GLHPR++ EGF  A+ KALEVLE +K+T    RE L+DVA+TSLRTKV  ELAD+L
Sbjct: 108 YISEGLHPRIVAEGFEIAKEKALEVLEQVKVTKEMDRETLIDVAKTSLRTKVHTELADIL 167

Query: 559 AEP--NSVPSLR 568
            E   +SV ++R
Sbjct: 168 TEAVVDSVLAVR 179



 Score = 79.3 bits (194), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 36/45 (80%), Positives = 42/45 (93%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265
           QIQHPTASLIA+ +TA DD+TGDGTTS VL+IGELLKQAD+YI+E
Sbjct: 67  QIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISE 111



 Score = 68.9 bits (167), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 40/46 (86%)

Query: 118 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
           KS+    L++G+VL+HGARHPDM K V++A+ILTCN+S+EYEK++V
Sbjct: 198 KSETDTTLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEV 243



 Score = 63.9 bits (154), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/36 (69%), Positives = 34/36 (94%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           G+VL+HGARHPDM K V++A+ILTCN+S+EYEK++V
Sbjct: 208 GLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEV 243



 Score = 55.1 bits (131), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           NSG+D Q+TLVK+Q    E+ G   GVD+N+GE +   +AGI+DN  VK+Q+++S
Sbjct: 453 NSGYDPQETLVKVQAEHAES-GQLTGVDLNTGEPMVAAAAGIWDNYNVKKQLLHS 506


>sp|O77622|TCPZ_RABIT T-complex protein 1 subunit zeta OS=Oryctolagus cuniculus GN=CCT6
           PE=2 SV=3
          Length = 531

 Score =  330 bits (845), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 174/347 (50%), Positives = 231/347 (66%), Gaps = 40/347 (11%)

Query: 160 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIA 219
           KS+    L++G+VL+HGARHPDM K V++A+ILTCN+S+EYEK+          +  G  
Sbjct: 199 KSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTE---------VNSGFF 249

Query: 220 NQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCST 279
            +       L+      ++D         V  I EL K+                  C  
Sbjct: 250 YKSAEEREKLVKAERKFIED--------RVKKIVELKKKV-----------------CGD 284

Query: 280 SDR-----YRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHL 334
           SD+      + GIDP SLD  A+EGI+ALRRAKRRNMERL+LACGG  +NS++ L P  L
Sbjct: 285 SDKGFVVINQKGIDPFSLDALAKEGIVALRRAKRRNMERLTLACGGVPLNSLDDLNPDCL 344

Query: 335 GYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDD 394
           G+AG V+E+ LGEEKFTF+E+C NP+SVT+L+KGPNKHTL Q KDA+RDGLRA+KN IDD
Sbjct: 345 GHAGLVYEYTLGEEKFTFIEKCNNPRSVTLLVKGPNKHTLTQIKDAIRDGLRAVKNAIDD 404

Query: 395 GAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLV 454
           G VVPGAGA EVA   AL  YK++VKG+++LG+QA+A+ALLIIPK +A NSGFD Q+TLV
Sbjct: 405 GCVVPGAGAVEVAMAEALIKYKSSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLV 464

Query: 455 KLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWII 501
           K++    E+ G  VGVD+N+GE +     GI+DN  VK+Q+++S  +
Sbjct: 465 KIRTEHSES-GQLVGVDLNTGEPMVAAEVGIWDNYCVKKQLLHSCTV 510



 Score = 89.0 bits (219), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 48/53 (90%)

Query: 1   MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           MVE+MEMKHK+  D+ L++G+VLDHGARHPDM K V++A+ILTCN+S+EYEK+
Sbjct: 190 MVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKT 242



 Score = 81.3 bits (199), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/62 (62%), Positives = 48/62 (77%)

Query: 499 WIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLL 558
           +I  GLHPR+ITEGF  A+ KAL+VLE +K++    RE L+DVARTSLRTKV  ELAD+L
Sbjct: 109 YISEGLHPRIITEGFEAAKEKALQVLEQIKVSREMDRETLIDVARTSLRTKVHAELADVL 168

Query: 559 AE 560
            E
Sbjct: 169 TE 170



 Score = 79.7 bits (195), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 36/45 (80%), Positives = 42/45 (93%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265
           QIQHPTASLIA+ +TA DD+TGDGTTS VL+IGELLKQAD+YI+E
Sbjct: 68  QIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISE 112



 Score = 68.2 bits (165), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 40/46 (86%)

Query: 118 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
           KS+    L++G+VL+HGARHPDM K V++A+ILTCN+S+EYEK++V
Sbjct: 199 KSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEV 244



 Score = 63.9 bits (154), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/36 (69%), Positives = 34/36 (94%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           G+VL+HGARHPDM K V++A+ILTCN+S+EYEK++V
Sbjct: 209 GLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEV 244



 Score = 54.3 bits (129), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           NSGFD Q+TLVK++    E+ G  VGVD+N+GE +     GI+DN  VK+Q+++S
Sbjct: 454 NSGFDLQETLVKIRTEHSES-GQLVGVDLNTGEPMVAAEVGIWDNYCVKKQLLHS 507


>sp|Q5RCD2|TCPZ_PONAB T-complex protein 1 subunit zeta OS=Pongo abelii GN=CCT6 PE=2 SV=3
          Length = 531

 Score =  328 bits (841), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 171/347 (49%), Positives = 229/347 (65%), Gaps = 40/347 (11%)

Query: 160 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIA 219
           KS+    L++G+VL+HGARHPDM K V++A+ILTCN+S+EYEK+          +  G  
Sbjct: 199 KSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTE---------VNSGFF 249

Query: 220 NQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCST 279
            +       L+      ++D                       I E+  K+      C  
Sbjct: 250 YKSAEEREKLVKAERKFIEDRVKK-------------------IIELKRKV------CGD 284

Query: 280 SDR-----YRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHL 334
           SD+      + GIDP SLD  ++EGI+ALRRAKRRNMERL+LACGG A+NS + L P  L
Sbjct: 285 SDKGFVVINQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDQL 344

Query: 335 GYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDD 394
           G+AG V+E+ LGEEKFTF+E+C NP+SVT+L+KGPNKHTL Q KDAVRDGLRA++N IDD
Sbjct: 345 GHAGLVYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVRNAIDD 404

Query: 395 GAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLV 454
           G VVPGAGA EVA   AL  +K +VKG+++LG+QA+A+ALLIIPK +A NSGFD Q+TLV
Sbjct: 405 GCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLV 464

Query: 455 KLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWII 501
           K+Q    E+ G  VGVD+N+GE +     G++DN  VK+Q+++S  +
Sbjct: 465 KIQAEHSES-GQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTV 510



 Score = 88.6 bits (218), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 48/53 (90%)

Query: 1   MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           M+E+MEMKHK+  D+ L++G+VLDHGARHPDM K V++A+ILTCN+S+EYEK+
Sbjct: 190 MIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKT 242



 Score = 79.7 bits (195), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 36/45 (80%), Positives = 42/45 (93%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265
           QIQHPTASLIA+ +TA DD+TGDGTTS VL+IGELLKQAD+YI+E
Sbjct: 68  QIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISE 112



 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/62 (61%), Positives = 47/62 (75%)

Query: 499 WIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLL 558
           +I  GLHPR+ITEGF  A+ KAL+ LE +K++    RE L+DVARTSLRTKV  ELAD+L
Sbjct: 109 YISEGLHPRIITEGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVL 168

Query: 559 AE 560
            E
Sbjct: 169 TE 170



 Score = 68.6 bits (166), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 40/46 (86%)

Query: 118 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
           KS+    L++G+VL+HGARHPDM K V++A+ILTCN+S+EYEK++V
Sbjct: 199 KSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEV 244



 Score = 63.9 bits (154), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/36 (69%), Positives = 34/36 (94%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           G+VL+HGARHPDM K V++A+ILTCN+S+EYEK++V
Sbjct: 209 GLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEV 244



 Score = 55.5 bits (132), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           NSGFD Q+TLVK+Q    E+ G  VGVD+N+GE +     G++DN  VK+Q+++S
Sbjct: 454 NSGFDLQETLVKIQAEHSES-GQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHS 507


>sp|P40227|TCPZ_HUMAN T-complex protein 1 subunit zeta OS=Homo sapiens GN=CCT6A PE=1 SV=3
          Length = 531

 Score =  327 bits (839), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 172/347 (49%), Positives = 229/347 (65%), Gaps = 40/347 (11%)

Query: 160 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIA 219
           KS+    L++G+VL+HGARHPDM K V++A+ILTCN+S+EYEK+          +  G  
Sbjct: 199 KSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTE---------VNSGFF 249

Query: 220 NQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCST 279
            +       L+      ++D                       I E+  K+      C  
Sbjct: 250 YKSAEEREKLVKAERKFIEDRVKK-------------------IIELKRKV------CGD 284

Query: 280 SDR-----YRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHL 334
           SD+      + GIDP SLD  ++EGI+ALRRAKRRNMERL+LACGG A+NS + L P  L
Sbjct: 285 SDKGFVVINQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCL 344

Query: 335 GYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDD 394
           G+AG V+E+ LGEEKFTF+E+C NP+SVT+L+KGPNKHTL Q KDAVRDGLRA+KN IDD
Sbjct: 345 GHAGLVYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDD 404

Query: 395 GAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLV 454
           G VVPGAGA EVA   AL  +K +VKG+++LG+QA+A+ALLIIPK +A NSGFD Q+TLV
Sbjct: 405 GCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLV 464

Query: 455 KLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWII 501
           K+Q    E+ G  VGVD+N+GE +     G++DN  VK+Q+++S  +
Sbjct: 465 KIQAEHSES-GQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTV 510



 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 48/53 (90%)

Query: 1   MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           M+E+MEMKHK+  D+ L++G+VLDHGARHPDM K V++A+ILTCN+S+EYEK+
Sbjct: 190 MIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKT 242



 Score = 79.7 bits (195), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 36/45 (80%), Positives = 42/45 (93%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265
           QIQHPTASLIA+ +TA DD+TGDGTTS VL+IGELLKQAD+YI+E
Sbjct: 68  QIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISE 112



 Score = 79.3 bits (194), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 38/62 (61%), Positives = 47/62 (75%)

Query: 499 WIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLL 558
           +I  GLHPR+ITEGF  A+ KAL+ LE +K++    RE L+DVARTSLRTKV  ELAD+L
Sbjct: 109 YISEGLHPRIITEGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVL 168

Query: 559 AE 560
            E
Sbjct: 169 TE 170



 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 40/46 (86%)

Query: 118 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
           KS+    L++G+VL+HGARHPDM K V++A+ILTCN+S+EYEK++V
Sbjct: 199 KSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEV 244



 Score = 63.9 bits (154), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/36 (69%), Positives = 34/36 (94%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           G+VL+HGARHPDM K V++A+ILTCN+S+EYEK++V
Sbjct: 209 GLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEV 244



 Score = 55.1 bits (131), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           NSGFD Q+TLVK+Q    E+ G  VGVD+N+GE +     G++DN  VK+Q+++S
Sbjct: 454 NSGFDLQETLVKIQAEHSES-GQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHS 507


>sp|Q3T084|TCPW_BOVIN T-complex protein 1 subunit zeta-2 OS=Bos taurus GN=CCT6B PE=2 SV=3
          Length = 531

 Score =  322 bits (825), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 175/376 (46%), Positives = 240/376 (63%), Gaps = 35/376 (9%)

Query: 136 RHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCN 195
           R P+ P  +    I+     M++ KS+    L+KG+VL+HGARHPDM K V +A ILTCN
Sbjct: 180 RRPNYPIDLFMVEIM----EMKH-KSETDTKLIKGLVLDHGARHPDMKKRVDDAFILTCN 234

Query: 196 ISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGEL 255
           +S+EYEK+              +++   + TA    +   A      D     + +  ++
Sbjct: 235 VSLEYEKTE-------------VSSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKV 281

Query: 256 LKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLS 315
             Q++     +N K                GIDP SLD  A+ GI+ALRRAKRRNMERLS
Sbjct: 282 CAQSNKGFVVINQK----------------GIDPFSLDALAKHGILALRRAKRRNMERLS 325

Query: 316 LACGGTAMNSVEGLEPAHLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLA 375
           LACGG A+NSVE L    LG+AG V+E+ LGEEK+TF+E+C NP+SVT+L+KGPNKHTL 
Sbjct: 326 LACGGVAVNSVEDLSVDCLGHAGLVYEYTLGEEKYTFIEDCINPRSVTLLVKGPNKHTLT 385

Query: 376 QTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALL 435
           Q KDAVRDGLRAIKN I+DG VVPGAGA EV    AL  YK+T++G++RLG+QA+A+ALL
Sbjct: 386 QIKDAVRDGLRAIKNAIEDGCVVPGAGAVEVVIAEALVTYKHTIQGRARLGVQAFADALL 445

Query: 436 IIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQI 495
           IIPK +A NSG+D Q+TLVK+Q     +    VG+D+N+GE +    AG++DN  VK+Q+
Sbjct: 446 IIPKVLAQNSGYDLQETLVKVQAEHSNSKQ-PVGIDLNTGEPMVAADAGVWDNYCVKKQL 504

Query: 496 INSWIISGLHPRVITE 511
           ++S  +   +  ++ E
Sbjct: 505 LHSCTVIATNILLVDE 520



 Score = 87.8 bits (216), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/75 (57%), Positives = 55/75 (73%), Gaps = 4/75 (5%)

Query: 1   MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS--GSGPW 58
           MVE+MEMKHK+  D+ L+KG+VLDHGARHPDM K V +A ILTCN+S+EYEK+   SG +
Sbjct: 190 MVEIMEMKHKSETDTKLIKGLVLDHGARHPDMKKRVDDAFILTCNVSLEYEKTEVSSGFF 249

Query: 59  CATPGHAQ--VREER 71
             T    +  V+ ER
Sbjct: 250 YKTAEEKEKLVKAER 264



 Score = 79.7 bits (195), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 36/45 (80%), Positives = 42/45 (93%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265
           QIQHPTASLIA+ +TA DD+TGDGTTS VL+IGELLKQAD+YI+E
Sbjct: 68  QIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISE 112



 Score = 79.3 bits (194), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 53/72 (73%), Gaps = 2/72 (2%)

Query: 499 WIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLL 558
           +I  GLHPR+I EGF  A++KALEVLE +KI     REI LDVARTSL+TKV  +LAD+L
Sbjct: 109 YISEGLHPRIIAEGFEIAKIKALEVLEQVKIKKEMKREIHLDVARTSLQTKVHPQLADVL 168

Query: 559 AEP--NSVPSLR 568
            E   +SV ++R
Sbjct: 169 TEAVVDSVLAIR 180



 Score = 68.2 bits (165), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 5/70 (7%)

Query: 94  RHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCN 153
           R P+ P  +    I+     M++ KS+    L+KG+VL+HGARHPDM K V +A ILTCN
Sbjct: 180 RRPNYPIDLFMVEIM----EMKH-KSETDTKLIKGLVLDHGARHPDMKKRVDDAFILTCN 234

Query: 154 ISMEYEKSDV 163
           +S+EYEK++V
Sbjct: 235 VSLEYEKTEV 244



 Score = 62.4 bits (150), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/37 (67%), Positives = 33/37 (89%)

Query: 85  EGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           +G+VL+HGARHPDM K V +A ILTCN+S+EYEK++V
Sbjct: 208 KGLVLDHGARHPDMKKRVDDAFILTCNVSLEYEKTEV 244



 Score = 50.1 bits (118), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 1/55 (1%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           NSG+D Q+TLVK+Q     +    VG+D+N+GE +    AG++DN  VK+Q+++S
Sbjct: 454 NSGYDLQETLVKVQAEHSNSKQ-PVGIDLNTGEPMVAADAGVWDNYCVKKQLLHS 507


>sp|Q92526|TCPW_HUMAN T-complex protein 1 subunit zeta-2 OS=Homo sapiens GN=CCT6B PE=1
           SV=5
          Length = 530

 Score =  320 bits (819), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 168/345 (48%), Positives = 227/345 (65%), Gaps = 30/345 (8%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           L++G+VL+HGARHPDM K V++A IL CN+S+EYEK+              + +   + T
Sbjct: 206 LIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYEKTE-------------VNSGFFYKT 252

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
           A    +   A      D     + +  ++  Q++     +N K                G
Sbjct: 253 AEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQK----------------G 296

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           IDP SLD  A+ GI+ALRRAKRRNMERLSLACGG A+NS E L    LG+AG V+E+ LG
Sbjct: 297 IDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLG 356

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
           EEKFTF+EEC NP SVT+L+KGPNKHTL Q KDA+RDGLRAIKN I+DG +VPGAGA EV
Sbjct: 357 EEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEV 416

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
           A   AL  YKN++KG++RLG+QA+A+ALLIIPK +A N+G+D Q+TLVK+Q    E+  +
Sbjct: 417 AMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESKQL 476

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITE 511
            VGVD+N+GE +    AG++DN  VK+Q+++S  +   +  ++ E
Sbjct: 477 -VGVDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDE 520



 Score = 83.6 bits (205), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 55/72 (76%), Gaps = 2/72 (2%)

Query: 499 WIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLL 558
           +I  GLHPR+I EGF  A++KALEVLE +K+T    R+ILLDVARTSL+TKV  ELAD+L
Sbjct: 109 YISEGLHPRIIAEGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKVHAELADVL 168

Query: 559 AE--PNSVPSLR 568
            E   +SV ++R
Sbjct: 169 TEVVVDSVLAVR 180



 Score = 83.6 bits (205), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 4/75 (5%)

Query: 1   MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS--GSGPW 58
           MVE+MEMKHK   D+ L++G+VLDHGARHPDM K V++A IL CN+S+EYEK+   SG +
Sbjct: 190 MVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYEKTEVNSGFF 249

Query: 59  CATPGHAQ--VREER 71
             T    +  V+ ER
Sbjct: 250 YKTAEEKEKLVKAER 264



 Score = 79.3 bits (194), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 36/45 (80%), Positives = 42/45 (93%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265
           QIQHPTASLIA+ +TA DD+TGDGTTS VL+IGELLKQAD+YI+E
Sbjct: 68  QIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISE 112



 Score = 63.9 bits (154), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/39 (64%), Positives = 35/39 (89%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
           L++G+VL+HGARHPDM K V++A IL CN+S+EYEK++V
Sbjct: 206 LIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYEKTEV 244



 Score = 62.8 bits (151), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 39/50 (78%), Gaps = 3/50 (6%)

Query: 75  DMQHQHGIRE---EGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           +M+H+ G      +G+VL+HGARHPDM K V++A IL CN+S+EYEK++V
Sbjct: 195 EMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYEKTEV 244



 Score = 51.2 bits (121), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           N+G+D Q+TLVK+Q    E+  + VGVD+N+GE +    AG++DN  VK+Q+++S
Sbjct: 454 NAGYDPQETLVKVQAEHVESKQL-VGVDLNTGEPMVAADAGVWDNYCVKKQLLHS 507


>sp|P46550|TCPZ_CAEEL T-complex protein 1 subunit zeta OS=Caenorhabditis elegans GN=cct-6
           PE=1 SV=1
          Length = 539

 Score =  317 bits (813), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 168/345 (48%), Positives = 229/345 (66%), Gaps = 34/345 (9%)

Query: 158 YEKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKG 217
           +  SD+   LV+G+VL+HGARHPDMP+ VK+A+ILTCN+S+EYEK+          +  G
Sbjct: 197 HHDSDMDTTLVRGLVLDHGARHPDMPRHVKDAYILTCNVSLEYEKTE---------VNSG 247

Query: 218 IANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDC 277
           +  +      +L+A                      E + +    I E+  K+   +PD 
Sbjct: 248 LFYKTAKEREALLAAER-------------------EFITRRVHKIIELKKKVIDNSPDG 288

Query: 278 STSDRY---RTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHL 334
                    + GIDP SLDL A EGI+ALRRAKRRNMERL LA GG A+NSV+ L P  L
Sbjct: 289 KNKGFVVINQKGIDPPSLDLLASEGILALRRAKRRNMERLQLAVGGEAVNSVDDLTPEDL 348

Query: 335 GYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDD 394
           G+AG V+EH LGEEK+TF+EEC+ P+SVT+L+KGPNKHT+ Q KDA+ DGLRA+ NTI D
Sbjct: 349 GWAGLVYEHSLGEEKYTFIEECRAPKSVTLLIKGPNKHTITQIKDAIHDGLRAVFNTIVD 408

Query: 395 GAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLV 454
            AV+PGA AFE+AA+  L+     +KG+++LG +A+A+ALL+IPKT+AVN G+DAQ+TLV
Sbjct: 409 KAVLPGAAAFEIAAYVMLKKDVENLKGRAKLGAEAFAQALLVIPKTLAVNGGYDAQETLV 468

Query: 455 KL-QEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
           KL +E     P +AVG+D+ +G  + P   GI+DN+TVK+  I+S
Sbjct: 469 KLIEEKTAAGPDIAVGLDLETGGAVEPQ--GIWDNVTVKKNSISS 511



 Score = 85.5 bits (210), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 46/53 (86%)

Query: 1   MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           MVE MEM H +  D+ LV+G+VLDHGARHPDMP+ VK+A+ILTCN+S+EYEK+
Sbjct: 190 MVEKMEMHHDSDMDTTLVRGLVLDHGARHPDMPRHVKDAYILTCNVSLEYEKT 242



 Score = 73.6 bits (179), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 42/48 (87%)

Query: 116 YEKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
           +  SD+   LV+G+VL+HGARHPDMP+ VK+A+ILTCN+S+EYEK++V
Sbjct: 197 HHDSDMDTTLVRGLVLDHGARHPDMPRHVKDAYILTCNVSLEYEKTEV 244



 Score = 71.6 bits (174), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/44 (77%), Positives = 40/44 (90%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265
           IQHPTAS+IA+ASTA DD+TGDGTTSTVL+IGELLKQA+  + E
Sbjct: 69  IQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLE 112



 Score = 68.9 bits (167), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 45/63 (71%)

Query: 498 SWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADL 557
           S ++ GLHPR++TEGF  A  K LE+LE  K   P  R++L++V RT+LRTK+ ++LAD 
Sbjct: 108 SLVLEGLHPRIVTEGFEWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADH 167

Query: 558 LAE 560
           + E
Sbjct: 168 ITE 170



 Score = 67.0 bits (162), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 26/36 (72%), Positives = 35/36 (97%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           G+VL+HGARHPDMP+ VK+A+ILTCN+S+EYEK++V
Sbjct: 209 GLVLDHGARHPDMPRHVKDAYILTCNVSLEYEKTEV 244



 Score = 54.7 bits (130), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 3/57 (5%)

Query: 573 VNSGFDAQDTLVKL-QEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           VN G+DAQ+TLVKL +E     P +AVG+D+ +G  + P   GI+DN+TVK+  I+S
Sbjct: 457 VNGGYDAQETLVKLIEEKTAAGPDIAVGLDLETGGAVEPQ--GIWDNVTVKKNSISS 511


>sp|Q61390|TCPW_MOUSE T-complex protein 1 subunit zeta-2 OS=Mus musculus GN=Cct6b PE=2
           SV=4
          Length = 531

 Score =  315 bits (807), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 170/371 (45%), Positives = 237/371 (63%), Gaps = 45/371 (12%)

Query: 136 RHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCN 195
           R P +P  +    I    + M + KS+    L++G+VL+HGARHP M K V++A+ILTCN
Sbjct: 180 RRPGVPIDLFMVEI----VEMRH-KSETDTQLIRGLVLDHGARHPRMRKQVRDAYILTCN 234

Query: 196 ISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGEL 255
           +S+EYEK+          ++ G   +       L+      ++D                
Sbjct: 235 VSLEYEKTE---------VSSGFFYKTVEEKEKLVKAERKFIEDRVQK------------ 273

Query: 256 LKQADIYIAEVNLKMHKFAPDCSTSDR-----YRTGIDPQSLDLFAREGIIALRRAKRRN 310
                  I ++  K+      C+ S++      + GIDP SL++ A+  I+ALRRAKRRN
Sbjct: 274 -------IIDLKQKV------CAESNKGFVVINQKGIDPVSLEMLAKHNIVALRRAKRRN 320

Query: 311 MERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPN 370
           +ERL+LACGG A+NS EGL    LG+AG VFE+ LGEEKFTF+E+C NP SVT+L+KGPN
Sbjct: 321 LERLTLACGGLAVNSFEGLSEECLGHAGLVFEYALGEEKFTFIEDCVNPLSVTLLVKGPN 380

Query: 371 KHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAY 430
           KHTL Q KDA+RDGLRA+KN I+DG VVPGAGA EVA   AL NYK+ V+G+ RLGIQA+
Sbjct: 381 KHTLIQIKDALRDGLRAVKNAIEDGCVVPGAGAVEVAIAEALVNYKHRVQGRVRLGIQAF 440

Query: 431 AEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLT 490
           A+ALLIIPK +A NSG+D Q+TL+K+Q    E+  + +G+D+N+GE +    AGI+DN  
Sbjct: 441 ADALLIIPKVLAQNSGYDLQETLIKIQTKHAESKEL-LGIDLNTGEPMAAAEAGIWDNYC 499

Query: 491 VKRQIINSWII 501
           VK+ +++S  +
Sbjct: 500 VKKHLLHSCTV 510



 Score = 82.8 bits (203), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 54/72 (75%), Gaps = 2/72 (2%)

Query: 499 WIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLL 558
           +I  GLHPR+ITEGF  A+ KALEVL+ +K+     REILLDVARTSL+TKV  ELAD+L
Sbjct: 109 YISEGLHPRIITEGFDVAKTKALEVLDEIKVQKEMKREILLDVARTSLQTKVHAELADIL 168

Query: 559 AEP--NSVPSLR 568
            E   +SV ++R
Sbjct: 169 TEAVVDSVLAIR 180



 Score = 82.8 bits (203), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 51/63 (80%), Gaps = 2/63 (3%)

Query: 1   MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS--GSGPW 58
           MVE++EM+HK+  D+ L++G+VLDHGARHP M K V++A+ILTCN+S+EYEK+   SG +
Sbjct: 190 MVEIVEMRHKSETDTQLIRGLVLDHGARHPRMRKQVRDAYILTCNVSLEYEKTEVSSGFF 249

Query: 59  CAT 61
             T
Sbjct: 250 YKT 252



 Score = 73.2 bits (178), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 33/45 (73%), Positives = 40/45 (88%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265
           QIQHPTAS+IA+ + A D +TGDGTTS VL+IGELLKQAD+YI+E
Sbjct: 68  QIQHPTASIIAKVAAAQDHVTGDGTTSNVLIIGELLKQADLYISE 112



 Score = 65.9 bits (159), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 48/70 (68%), Gaps = 5/70 (7%)

Query: 94  RHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCN 153
           R P +P  +    I    + M + KS+    L++G+VL+HGARHP M K V++A+ILTCN
Sbjct: 180 RRPGVPIDLFMVEI----VEMRH-KSETDTQLIRGLVLDHGARHPRMRKQVRDAYILTCN 234

Query: 154 ISMEYEKSDV 163
           +S+EYEK++V
Sbjct: 235 VSLEYEKTEV 244



 Score = 61.2 bits (147), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/36 (66%), Positives = 33/36 (91%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           G+VL+HGARHP M K V++A+ILTCN+S+EYEK++V
Sbjct: 209 GLVLDHGARHPRMRKQVRDAYILTCNVSLEYEKTEV 244



 Score = 51.2 bits (121), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 39/55 (70%), Gaps = 1/55 (1%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           NSG+D Q+TL+K+Q    E+  + +G+D+N+GE +    AGI+DN  VK+ +++S
Sbjct: 454 NSGYDLQETLIKIQTKHAESKEL-LGIDLNTGEPMAAAEAGIWDNYCVKKHLLHS 507


>sp|Q76NU3|TCPZ_DICDI T-complex protein 1 subunit zeta OS=Dictyostelium discoideum
           GN=cct6 PE=1 SV=1
          Length = 539

 Score =  313 bits (803), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 175/379 (46%), Positives = 237/379 (62%), Gaps = 49/379 (12%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPK 184
           +V  ++L H    P+ P  +    I+T    M++     C  L+KG+VL+HG RHPDMPK
Sbjct: 174 VVDALLLIH---KPEQPLDLFMVEIMT----MQHRTDGHCS-LIKGLVLDHGTRHPDMPK 225

Query: 185 SVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDG 244
            + N  ILTCN+S+EYEK+       E++             A+ + +          D 
Sbjct: 226 KLTNCFILTCNVSLEYEKT-------EVN-------------ANFLYK----------DH 255

Query: 245 TTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRY-----RTGIDPQSLDLFAREG 299
            T + ++ GE    A      + LK H     C T D+      + GIDP  LD+ A+ G
Sbjct: 256 ETRSRMIDGEHKLVAAKCRQIIELKNHV----CDTPDKNFVVINQKGIDPICLDMLAKAG 311

Query: 300 IIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLGEEKFTFVEECKNP 359
           I+ LRRAKRRNMERL+LACGGTAMNS+E L P  LG+A  V+E  LGEEK+TFVE  KNP
Sbjct: 312 IMGLRRAKRRNMERLTLACGGTAMNSLEDLTPDCLGHADLVYEQTLGEEKYTFVEGVKNP 371

Query: 360 QSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTV 419
            S T+L+KGP KH + Q KDA+RDGLRA+KNTI+D  VVPG GAF++AA+  L  +K T+
Sbjct: 372 FSCTVLIKGPTKHQIEQIKDALRDGLRAVKNTIEDKCVVPGGGAFQIAAYADLMKFKETI 431

Query: 420 KGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLN 479
            G+++LGIQA+A+ALL++PKT+A NSGFD  DT++KLQE    A G  VG+DV SGE ++
Sbjct: 432 TGRTKLGIQAFADALLVVPKTLAQNSGFDPMDTIIKLQEEY--AKGHIVGLDVESGEPMD 489

Query: 480 PTSAGIYDNLTVKRQIINS 498
           P S GI+D  +V +Q+  S
Sbjct: 490 PVSEGIFDQYSVLKQVYRS 508



 Score = 83.6 bits (205), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 43/53 (81%)

Query: 1   MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           MVE+M M+H+T G   L+KG+VLDHG RHPDMPK + N  ILTCN+S+EYEK+
Sbjct: 192 MVEIMTMQHRTDGHCSLIKGLVLDHGTRHPDMPKKLTNCFILTCNVSLEYEKT 244



 Score = 69.3 bits (168), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/45 (68%), Positives = 39/45 (86%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265
           QIQHPTA+LIAR +TA DD+TGDGTT+ V+ IGELLKQ++ Y+ E
Sbjct: 68  QIQHPTAALIARTATAQDDITGDGTTTNVITIGELLKQSERYLQE 112



 Score = 68.2 bits (165), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 5/68 (7%)

Query: 96  PDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNIS 155
           P+ P  +    I+T    M++     C  L+KG+VL+HG RHPDMPK + N  ILTCN+S
Sbjct: 184 PEQPLDLFMVEIMT----MQHRTDGHCS-LIKGLVLDHGTRHPDMPKKLTNCFILTCNVS 238

Query: 156 MEYEKSDV 163
           +EYEK++V
Sbjct: 239 LEYEKTEV 246



 Score = 63.9 bits (154), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 37/49 (75%), Gaps = 3/49 (6%)

Query: 76  MQHQ---HGIREEGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           MQH+   H    +G+VL+HG RHPDMPK + N  ILTCN+S+EYEK++V
Sbjct: 198 MQHRTDGHCSLIKGLVLDHGTRHPDMPKKLTNCFILTCNVSLEYEKTEV 246



 Score = 56.6 bits (135), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 2/55 (3%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           NSGFD  DT++KLQE    A G  VG+DV SGE ++P S GI+D  +V +Q+  S
Sbjct: 456 NSGFDPMDTIIKLQEEY--AKGHIVGLDVESGEPMDPVSEGIFDQYSVLKQVYRS 508



 Score = 56.2 bits (134), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 499 WIISGLHPRVITEGFTQARLKALEVLESLKITTPPS--REILLDVARTSLRTKVERELAD 556
           ++   +HPR+I EGF  A+ + L  LE  K T+  +  RE+L+ +A+TSLRTK+  +LAD
Sbjct: 109 YLQENIHPRIIAEGFELAKDRCLAFLEEFKQTSQDTLDRELLISIAKTSLRTKLPADLAD 168

Query: 557 LLAE 560
            L E
Sbjct: 169 QLTE 172


>sp|O94515|TCPZ_SCHPO T-complex protein 1 subunit zeta OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=cct6 PE=3 SV=1
          Length = 535

 Score =  294 bits (752), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 221/368 (60%), Gaps = 37/368 (10%)

Query: 136 RHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCN 195
           R PD P  +    I+         +S     L++G++L+HGARHPDMPK VKNA+IL  N
Sbjct: 178 RRPDEPIDLHMVEIMKMQ-----NRSASDTQLIRGLLLDHGARHPDMPKQVKNAYILILN 232

Query: 196 ISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGEL 255
           +S+EYEKS          +  G           L+      +D+              +L
Sbjct: 233 VSLEYEKSE---------INSGFFYSTSEQRERLVESERKFVDN--------------KL 269

Query: 256 LKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLS 315
            K     I E+  ++ +  P  +     + GIDP SLD+ A+ GI+ALRRAKRRNMERL 
Sbjct: 270 RK-----IVELKKEVCERDPTANFVIINQKGIDPLSLDVLAKNGIMALRRAKRRNMERLQ 324

Query: 316 LACGGTAMNSVEGLEPAHLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLA 375
           LACGG A NSV+ L P  LG+AGSV+E  LGEEK+TFVE+ K+P+S TIL+ GPN +T+ 
Sbjct: 325 LACGGVAQNSVDDLNPEVLGWAGSVYERTLGEEKYTFVEDVKDPKSATILIHGPNTYTIQ 384

Query: 376 QTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNY--KNTVKGKSRLGIQAYAEA 433
           Q +DA RDGLRA+KN ++D  ++ GAGAFEVA    L+N      VKGK+++G+ AYA+A
Sbjct: 385 QIQDATRDGLRAVKNAVEDNCLIVGAGAFEVACAAHLRNKFAAKEVKGKAKMGVYAYADA 444

Query: 434 LLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKR 493
           LLIIPKT+A NS +D QD +V LQE   E  G  VG+D+ +G   +P   GIYDN  V R
Sbjct: 445 LLIIPKTLAANSSYDTQDAIVALQEEASE--GYKVGLDLKTGMPFDPEVEGIYDNYRVIR 502

Query: 494 QIINSWII 501
            +++S  +
Sbjct: 503 HMLHSATV 510



 Score = 84.7 bits (208), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 57/79 (72%), Gaps = 4/79 (5%)

Query: 1   MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS--GSGPW 58
           MVE+M+M++++  D+ L++G++LDHGARHPDMPK VKNA+IL  N+S+EYEKS   SG +
Sbjct: 188 MVEIMKMQNRSASDTQLIRGLLLDHGARHPDMPKQVKNAYILILNVSLEYEKSEINSGFF 247

Query: 59  CATPGHAQ--VREERAHPD 75
            +T    +  V  ER   D
Sbjct: 248 YSTSEQRERLVESERKFVD 266



 Score = 68.9 bits (167), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/45 (71%), Positives = 39/45 (86%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265
           QIQ+PTAS IA+A+TA DD TGDGTTS  L++GELLKQA++YI E
Sbjct: 66  QIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIRE 110



 Score = 68.6 bits (166), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 5/70 (7%)

Query: 94  RHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCN 153
           R PD P  +    I+         +S     L++G++L+HGARHPDMPK VKNA+IL  N
Sbjct: 178 RRPDEPIDLHMVEIMKMQ-----NRSASDTQLIRGLLLDHGARHPDMPKQVKNAYILILN 232

Query: 154 ISMEYEKSDV 163
           +S+EYEKS++
Sbjct: 233 VSLEYEKSEI 242



 Score = 63.9 bits (154), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/36 (69%), Positives = 33/36 (91%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           G++L+HGARHPDMPK VKNA+IL  N+S+EYEKS++
Sbjct: 207 GLLLDHGARHPDMPKQVKNAYILILNVSLEYEKSEI 242



 Score = 55.5 bits (132), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 41/61 (67%)

Query: 499 WIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLL 558
           +I  GLHP +I++GF  A+ +AL  L+S K      RE+LL+VA+TSL TK+  ++ + L
Sbjct: 107 YIREGLHPSLISDGFNLAKNEALTFLDSFKTDFEVDREVLLNVAKTSLSTKISSKVVESL 166

Query: 559 A 559
           A
Sbjct: 167 A 167



 Score = 48.9 bits (115), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           NS +D QD +V LQE   E  G  VG+D+ +G   +P   GIYDN  V R +++S
Sbjct: 455 NSSYDTQDAIVALQEEASE--GYKVGLDLKTGMPFDPEVEGIYDNYRVIRHMLHS 507


>sp|P39079|TCPZ_YEAST T-complex protein 1 subunit zeta OS=Saccharomyces cerevisiae
           (strain ATCC 204508 / S288c) GN=CCT6 PE=1 SV=1
          Length = 546

 Score =  257 bits (656), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 144/337 (42%), Positives = 198/337 (58%), Gaps = 35/337 (10%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
            +KG+VL+HG RHPDMP  VKNA++L  N+S+EYEK+                       
Sbjct: 209 FIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEKT--------------------EVN 248

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
           +     ++   D +     +    V  +L K     I ++  ++    PD       + G
Sbjct: 249 SGFFYSSADQRDKLAA---SERKFVDAKLKK-----IIDLKNEVCGMDPDKGFVIINQKG 300

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           IDP SLD+FA+  I+ALRRAKRRNMERL L  GG A NSVE L P  LG++G V++  +G
Sbjct: 301 IDPMSLDVFAKHNILALRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIG 360

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
           EEKFT+V E  +P+S TIL+KG   + LAQTKDAVRDGLRA+ N + D  ++PGAGAF +
Sbjct: 361 EEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYI 420

Query: 407 AAWHALQNY---KNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEA 463
           A    L++    K   KGK++ GI+A+AEALL+IPKT+  NSGFD  D L  +++   +A
Sbjct: 421 ALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDA 480

Query: 464 PGV----AVGVDVNSGEVLNPTSAGIYDNLTVKRQII 496
                   VGVD+N G+  +PT  GI+D+  V R  I
Sbjct: 481 QDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAI 517



 Score = 83.2 bits (204), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 44/53 (83%)

Query: 1   MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           MVE+M+M+H +P D+  +KG+VLDHG RHPDMP  VKNA++L  N+S+EYEK+
Sbjct: 193 MVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEKT 245



 Score = 63.5 bits (153), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 24/39 (61%), Positives = 33/39 (84%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
            +KG+VL+HG RHPDMP  VKNA++L  N+S+EYEK++V
Sbjct: 209 FIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEKTEV 247



 Score = 60.5 bits (145), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 37/51 (72%), Gaps = 5/51 (9%)

Query: 76  MQHQHGIREE-----GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           MQ QH   ++     G+VL+HG RHPDMP  VKNA++L  N+S+EYEK++V
Sbjct: 197 MQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEKTEV 247



 Score = 55.8 bits (133), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 3/63 (4%)

Query: 499 WIISGLHPRVITEGFTQARLKALEVLESLKITT---PPSREILLDVARTSLRTKVERELA 555
           +I  G+HPR+IT+GF  AR ++++ L+  KI+       RE LL VAR+SL TKV+ +L 
Sbjct: 108 FIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDADLT 167

Query: 556 DLL 558
           ++L
Sbjct: 168 EVL 170



 Score = 51.2 bits (121), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/45 (62%), Positives = 36/45 (80%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265
           QIQ PTA LIARA+ A D++TGDGTT+ V ++GELL+QA  +I E
Sbjct: 67  QIQSPTAVLIARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQE 111



 Score = 38.1 bits (87), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGV----AVGVDVNSGEVLNPTSAGIYDNLTVKRQII 626
           NSGFD  D L  +++   +A        VGVD+N G+  +PT  GI+D+  V R  I
Sbjct: 461 NSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAI 517


>sp|O26885|THSB_METTH Thermosome subunit beta OS=Methanothermobacter thermautotrophicus
           (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
           / Delta H) GN=thsB PE=3 SV=1
          Length = 538

 Score =  174 bits (442), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/334 (32%), Positives = 178/334 (53%), Gaps = 44/334 (13%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           LV+GV+++    HP MPK V+NA I   N  +E +++       EI +     +Q+Q   
Sbjct: 208 LVQGVIIDKERVHPGMPKKVENAKIALLNCPIEVKETEVDA---EIRITD--PSQMQ--- 259

Query: 227 ASLIARASTAMDDMTGD--GTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYR 284
            + I +    + DM      T + VL                          C      +
Sbjct: 260 -AFIEQEEQMIRDMVNSIVDTGANVLF-------------------------C------Q 287

Query: 285 TGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHV 344
            GID  +    A+ G++A+RR K+ +ME+LS A G   + ++E L P  LG AG V E  
Sbjct: 288 KGIDDLAQHYLAKAGVLAVRRVKKSDMEKLSKATGANIVTNIEDLSPEDLGEAGVVSEKK 347

Query: 345 LGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAF 404
           +  E+  FVEECK P++VTIL++G  +H +++ + A+ D +  +  T++DG VV G GA 
Sbjct: 348 ISGEEMIFVEECKEPKAVTILVRGSTEHVVSEVERAIEDAIGVVAATVEDGKVVAGGGAP 407

Query: 405 EVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAP 464
           E+     L++Y +++ G+ +L + A+AEAL I+PKT+A N+G D+ D LV L+ A  E+ 
Sbjct: 408 EIEIAKRLKDYADSISGREQLAVSAFAEALEIVPKTLAENAGLDSIDVLVDLRAAHEES- 466

Query: 465 GVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
              +G+DV  G++++   AG+ +   VK+Q I S
Sbjct: 467 -TYMGIDVFDGKIVDMKEAGVIEPHRVKKQAIQS 499



 Score = 42.7 bits (99), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           I+HP A ++   +   +D  GDGTT+ V++ GELLK+A+
Sbjct: 73  IEHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKKAE 111



 Score = 40.8 bits (94), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 5/68 (7%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHI--LTCNISMEYEKSGSGPWCATPGHAQV---R 68
           DS LV+GV++D    HP MPK V+NA I  L C I ++  +  +      P   Q    +
Sbjct: 205 DSTLVQGVIIDKERVHPGMPKKVENAKIALLNCPIEVKETEVDAEIRITDPSQMQAFIEQ 264

Query: 69  EERAHPDM 76
           EE+   DM
Sbjct: 265 EEQMIRDM 272



 Score = 36.6 bits (83), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 26/39 (66%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
           LV+GV+++    HP MPK V+NA I   N  +E ++++V
Sbjct: 208 LVQGVIIDKERVHPGMPKKVENAKIALLNCPIEVKETEV 246



 Score = 35.4 bits (80), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           N+G D+ D LV L+ A  E+    +G+DV  G++++   AG+ +   VK+Q I S
Sbjct: 447 NAGLDSIDVLVDLRAAHEES--TYMGIDVFDGKIVDMKEAGVIEPHRVKKQAIQS 499



 Score = 33.5 bits (75), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 24/37 (64%)

Query: 85  EGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           +GV+++    HP MPK V+NA I   N  +E ++++V
Sbjct: 210 QGVIIDKERVHPGMPKKVENAKIALLNCPIEVKETEV 246



 Score = 32.7 bits (73), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 504 LHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLAE 560
           +HP +I  G+ QA  KA E+L+ + I     R+ L+ VA T++  K   +  + LAE
Sbjct: 118 IHPTIIAMGYRQAAEKAQEILDDIAIDA-SDRDTLMKVAMTAMTGKGTEKAREPLAE 173


>sp|Q9YDK6|THSA_AERPE Thermosome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
           DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsA PE=3
           SV=2
          Length = 554

 Score =  167 bits (423), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 172/333 (51%), Gaps = 40/333 (12%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           LV+G+VL+    HP MPK V+NA IL  +  +E +K       PE++    + +      
Sbjct: 217 LVRGIVLDKEVVHPAMPKRVENAKILVLDAPLEVQK-------PELTTKIRVTDI--EKL 267

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
            S +   +  + DM                             + K A   +     + G
Sbjct: 268 ESFLEEETRMLRDM-----------------------------VEKIAATGANVVITQKG 298

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A++GI+A+RR KR ++E+++ A G   + S+  L+P +LGYA  V E  +G
Sbjct: 299 IDEVAQHFLAKKGILAVRRVKRSDIEKVAKATGAKIVTSLRDLKPEYLGYAELVEERKVG 358

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
           E+K  F+E  KNP+SVTILL+G N   L + +  ++D L  ++N + +  +V G GA EV
Sbjct: 359 EDKMVFIEGAKNPKSVTILLRGANDMLLDEAERNIKDALHGLRNILREPKIVGGGGAVEV 418

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
                L+ +  TV GK +L I+AYAEAL  IP  +A ++G DA + L+KL+    +    
Sbjct: 419 ELALKLKEFARTVGGKQQLAIEAYAEALETIPTVLAESAGMDALEALLKLRSLHSQGYKF 478

Query: 467 AVGVDVNSGEV-LNPTSAGIYDNLTVKRQIINS 498
           A GV+V  G++  + T   +Y+ + VK+Q+I S
Sbjct: 479 A-GVNVLEGKIEEDMTKINVYEPVLVKKQVIKS 510



 Score = 45.1 bits (105), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 26/39 (66%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEK 52
           DS LV+G+VLD    HP MPK V+NA IL  +  +E +K
Sbjct: 214 DSKLVRGIVLDKEVVHPAMPKRVENAKILVLDAPLEVQK 252



 Score = 43.1 bits (100), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 14/92 (15%)

Query: 188 NAHILTCNISMEYEKSSQGGHQPEISLAKGIAN--------------QIQHPTASLIARA 233
            A+IL   +  E  KSS G    +  L     +              +IQHP A L+   
Sbjct: 25  RANILAARVLAEMLKSSLGPRGLDKMLVDAFGDITVTNDGATIVKEMEIQHPAAKLLVEV 84

Query: 234 STAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265
           + A D   GDGTTS V++ G LL++A+  + E
Sbjct: 85  AKAQDAEVGDGTTSVVVLAGALLEKAEKLLDE 116



 Score = 40.4 bits (93), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVC 164
           LV+G+VL+    HP MPK V+NA IL  +  +E +K ++ 
Sbjct: 217 LVRGIVLDKEVVHPAMPKRVENAKILVLDAPLEVQKPELT 256



 Score = 36.6 bits (83), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 23/37 (62%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVC 122
           G+VL+    HP MPK V+NA IL  +  +E +K ++ 
Sbjct: 220 GIVLDKEVVHPAMPKRVENAKILVLDAPLEVQKPELT 256


>sp|Q9YA66|THSB_AERPE Thermosome subunit beta OS=Aeropyrum pernix (strain ATCC 700893 /
           DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsB PE=3
           SV=2
          Length = 548

 Score =  167 bits (423), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 169/326 (51%), Gaps = 38/326 (11%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           LV+G+VL+    HPDMP+ V+NA I   +  +E EK       PEI L   I +  Q   
Sbjct: 222 LVRGIVLDKEVVHPDMPRRVENARIALLDTPLEIEK-------PEIDLEISITSPEQ--- 271

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
                                    I  L ++ +  + E   K+ K A   +     + G
Sbjct: 272 -------------------------IKALYEKQERILQE---KIEKIAATGANVVITQKG 303

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A++GI+A+RR KR ++E+++ A G   +  +E L P  LGYA  V E  +G
Sbjct: 304 IDDVAQHFLAKKGILAVRRVKRSDIEKIARATGARIVTDIEDLRPEDLGYAELVEERKVG 363

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
           E+K  F+E  KNP+SVTILL+G  +  + + + ++ D L  + + I DG +V G GA E 
Sbjct: 364 EDKMVFIEGAKNPKSVTILLRGGFERLVDEAERSLHDALSVVADAIMDGKIVAGGGAVEA 423

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
                L  Y + + GK++L ++A+A A+  +P+ +A N+G D  + LVKL+ A  +    
Sbjct: 424 EVAKVLYEYASKLPGKTQLAVEAFARAVEALPQALAHNAGHDPIEVLVKLRSAHEKPENK 483

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVK 492
             GVD+++GE+++  S G+ + + VK
Sbjct: 484 WYGVDLDTGEIVDMWSRGVLEPMRVK 509



 Score = 44.7 bits (104), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 26/39 (66%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEK 52
           D+ LV+G+VLD    HPDMP+ V+NA I   +  +E EK
Sbjct: 219 DTRLVRGIVLDKEVVHPDMPRRVENARIALLDTPLEIEK 257



 Score = 42.0 bits (97), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
           LV+G+VL+    HPDMP+ V+NA I   +  +E EK ++
Sbjct: 222 LVRGIVLDKEVVHPDMPRRVENARIALLDTPLEIEKPEI 260



 Score = 41.2 bits (95), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           + HP A ++ + S   +D  GDGT +TV+  GELLK+A+
Sbjct: 81  VAHPAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKEAE 119



 Score = 37.7 bits (86), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           G+VL+    HPDMP+ V+NA I   +  +E EK ++
Sbjct: 225 GIVLDKEVVHPDMPRRVENARIALLDTPLEIEKPEI 260



 Score = 37.0 bits (84), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 5/60 (8%)

Query: 504 LHPRVITEGFTQARLKALEVLESLKITTPPSR---EILLDVARTSLRTKVERELADLLAE 560
           +HP +I EG+ +A  KA EV+ES  I  P S    E L  +A+TSL +K   E  D  AE
Sbjct: 126 IHPTIIVEGYKEALRKASEVIES--IAEPVSYDDVEKLKLIAKTSLNSKAVAEARDYFAE 183



 Score = 33.9 bits (76), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 35/61 (57%)

Query: 562 NSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTV 621
            +V +L  +   N+G D  + LVKL+ A  +      GVD+++GE+++  S G+ + + V
Sbjct: 449 RAVEALPQALAHNAGHDPIEVLVKLRSAHEKPENKWYGVDLDTGEIVDMWSRGVLEPMRV 508

Query: 622 K 622
           K
Sbjct: 509 K 509


>sp|Q58405|THS_METJA Thermosome subunit OS=Methanocaldococcus jannaschii (strain ATCC
           43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
           GN=ths PE=3 SV=1
          Length = 542

 Score =  166 bits (421), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 173/332 (52%), Gaps = 38/332 (11%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           L++GVV++    +P MPK V+NA I   N  +E +++       EI        +I  P 
Sbjct: 212 LIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKETETDA---EI--------RITDPA 260

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
             +                        E ++Q +  I ++   + K A   +     + G
Sbjct: 261 KLM------------------------EFIEQEEKMIKDM---VEKIAATGANVVFCQKG 293

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A++GI+A+RR K+ +ME+L+ A G   +  ++ L P  LG AG V E  + 
Sbjct: 294 IDDLAQHYLAKKGILAVRRVKKSDMEKLAKATGARIVTKIDDLTPEDLGEAGLVEERKVA 353

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
            +   FVE+CK+P++VTIL +G  +H + +   A+ D +  +K  +++G +V G GA E+
Sbjct: 354 GDAMIFVEQCKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEI 413

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
                L+ +  +V G+ +L ++A+A+AL +IP+T+A NSG D  D LVKL+ A  +  G 
Sbjct: 414 ELAKRLRKFAESVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGE 473

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
             G+DV  GEV++    G+ + L VK Q I+S
Sbjct: 474 VYGLDVFEGEVVDMLEKGVVEPLKVKTQAIDS 505



 Score = 42.7 bits (99), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 32/55 (58%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           NSG D  D LVKL+ A  +  G   G+DV  GEV++    G+ + L VK Q I+S
Sbjct: 451 NSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGEVVDMLEKGVVEPLKVKTQAIDS 505



 Score = 38.1 bits (87), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 26/39 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           ++HP A ++   +   +   GDGTT+ V++ GELL++A+
Sbjct: 73  VEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAE 111



 Score = 35.4 bits (80), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 27/123 (21%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGSGPWCATPGHAQV-----R 68
           ++ L++GVV+D    +P MPK V+NA I   N  +E +++ +         A++     +
Sbjct: 209 ETKLIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKETETDAEIRITDPAKLMEFIEQ 268

Query: 69  EERAHPDMQH--------------------QHGIREEGVVLNHGARHPDMPKSVK--NAH 106
           EE+   DM                      QH + ++G++     +  DM K  K   A 
Sbjct: 269 EEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYLAKKGILAVRRVKKSDMEKLAKATGAR 328

Query: 107 ILT 109
           I+T
Sbjct: 329 IVT 331



 Score = 34.7 bits (78), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 5/62 (8%)

Query: 504 LHPRVITEGFTQARLKALEVLESL-KITTPPSREILLDVARTSLR----TKVERELADLL 558
           +HP VI  G+  AR KA+E L+S+ K   P   E+L  +A TS+      K   +LA+++
Sbjct: 118 IHPSVIINGYEMARNKAVEELKSIAKEVKPEDTEMLKKIAMTSITGKGAEKAREQLAEIV 177

Query: 559 AE 560
            E
Sbjct: 178 VE 179



 Score = 34.3 bits (77), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 97/241 (40%), Gaps = 38/241 (15%)

Query: 86  GVVLNHGARHPDMPKSVKNAHI--LTCNISMEYEKSDVCIILVKGVVLNHGARH-----P 138
           GVV++    +P MPK V+NA I  L C I ++  ++D  I +     L            
Sbjct: 215 GVVIDKERVNPQMPKKVENAKIALLNCPIEVKETETDAEIRITDPAKLMEFIEQEEKMIK 274

Query: 139 DMPKSV--KNAHILTC-----NISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVK--NA 189
           DM + +    A+++ C     +++  Y       +  KG++     +  DM K  K   A
Sbjct: 275 DMVEKIAATGANVVFCQKGIDDLAQHY-------LAKKGILAVRRVKKSDMEKLAKATGA 327

Query: 190 HILTCNISMEYEKSSQGGHQPEISLAKG---IANQIQHPTA-SLIARAST---------A 236
            I+T    +  E   + G   E  +A        Q +HP A +++AR ST         A
Sbjct: 328 RIVTKIDDLTPEDLGEAGLVEERKVAGDAMIFVEQCKHPKAVTILARGSTEHVVEEVARA 387

Query: 237 MDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFA 296
           +DD    G     L  G+++        E+  ++ KFA   +  ++        +L++  
Sbjct: 388 IDDAI--GVVKCALEEGKIVAGGGATEIELAKRLRKFAESVAGREQLAVKAFADALEVIP 445

Query: 297 R 297
           R
Sbjct: 446 R 446



 Score = 33.9 bits (76), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHI--LTCNISMEYEKSDVCI 165
           L++GVV++    +P MPK V+NA I  L C I ++  ++D  I
Sbjct: 212 LIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKETETDAEI 254


>sp|O57762|THS_PYRHO Thermosome subunit OS=Pyrococcus horikoshii (strain ATCC 700860 /
           DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ths PE=3
           SV=1
          Length = 549

 Score =  166 bits (420), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 171/332 (51%), Gaps = 39/332 (11%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           L++GVV++    HP MPK ++NA I   N ++E +++       EI +      Q+Q   
Sbjct: 215 LIRGVVIDKEVVHPGMPKRIENAKIALINDALEVKETE---TDAEIRITS--PEQLQA-- 267

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
                                        L+Q +  + E+  K+ +   +       + G
Sbjct: 268 ----------------------------FLEQEEKMLKEMVDKIKEVGANVVF---VQKG 296

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A+ GI+A+RR K+ +ME+L+ A G   + ++  L P  LG A  V E  + 
Sbjct: 297 IDDLAQHYLAKYGILAVRRVKKSDMEKLAKATGAKIVTNIRDLTPEDLGEAELVEERKVA 356

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
            E   FVE CKNP++VTIL++G  +H + + + A+ D ++ +K+ ++DG ++ G GA E+
Sbjct: 357 GENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAIKVVKDILEDGKIIAGGGASEI 416

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
                L  Y   V GK +L I+A+AEAL +IP+T+A N+G D  +TLVK+  A  E  G 
Sbjct: 417 ELSIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGQ 475

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
            +G+DV  GE  +    G+ + + VK+Q I S
Sbjct: 476 TIGIDVYEGEPADMMERGVIEPVRVKKQAIKS 507



 Score = 43.1 bits (100), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 26/39 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           IQHP A ++   +   D   GDGTT+ V++ GELLK+A+
Sbjct: 74  IQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAE 112



 Score = 39.7 bits (91), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 27/40 (67%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           D+ L++GVV+D    HP MPK ++NA I   N ++E +++
Sbjct: 212 DTRLIRGVVIDKEVVHPGMPKRIENAKIALINDALEVKET 251



 Score = 38.5 bits (88), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 504 LHPRVITEGFTQARLKALEVLESL-KITTPPSREILLDVARTSLRTKVERELADLLA 559
           +HP +I +G+T A  KA E+L+S+ K   P   E+LL  A T++  K   E  + LA
Sbjct: 119 IHPSIIIKGYTLASQKAQEILDSIAKEVKPDDEEVLLKAAMTAITGKAAEEEREYLA 175



 Score = 36.6 bits (83), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 26/38 (68%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 162
           L++GVV++    HP MPK ++NA I   N ++E ++++
Sbjct: 215 LIRGVVIDKEVVHPGMPKRIENAKIALINDALEVKETE 252



 Score = 34.7 bits (78), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           N+G D  +TLVK+  A  E  G  +G+DV  GE  +    G+ + + VK+Q I S
Sbjct: 454 NAGLDPIETLVKVIAAHKE-KGQTIGIDVYEGEPADMMERGVIEPVRVKKQAIKS 507


>sp|P61112|THSA_THEK1 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA
           PE=1 SV=1
          Length = 548

 Score =  166 bits (420), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 171/332 (51%), Gaps = 39/332 (11%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           LV+GVV++    HP MPK V+NA I   N ++E +K+       +I++     +Q+    
Sbjct: 215 LVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDA---KINITS--PDQLM--- 266

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
            S + +    + DM                             +   A   +     + G
Sbjct: 267 -SFLEQEEKMLKDM-----------------------------VDHIAQTGANVVFVQKG 296

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A+ GI+A+RR K+ +ME+L+ A G   + +V+ L P  LGYA  V E  L 
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLA 356

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
            E   FVE CKNP++VTIL++G  +H + + + A+ D ++ +K+ ++DGAV+P  GA E+
Sbjct: 357 GENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEI 416

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
                L  Y   V GK  L I+ +A+AL IIPKT+A N+G D  + LVK+  +  +  G+
Sbjct: 417 ELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVI-SEHKNRGL 475

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
            +G+DV  G+  +    GI + L VK+Q I S
Sbjct: 476 GIGIDVFEGKPADMLEKGIIEPLRVKKQAIKS 507



 Score = 41.2 bits (95), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 27/40 (67%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           +S LV+GVV+D    HP MPK V+NA I   N ++E +K+
Sbjct: 212 ESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKT 251



 Score = 41.2 bits (95), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 26/39 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           +QHP A ++   +   D   GDGTT+ V++ GELL++A+
Sbjct: 74  LQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAE 112



 Score = 38.9 bits (89), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 26/38 (68%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 162
           LV+GVV++    HP MPK V+NA I   N ++E +K++
Sbjct: 215 LVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTE 252



 Score = 35.4 bits (80), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 69  EERAHPDMQHQHGIREEGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 120
           E++A   ++    +R  GVV++    HP MPK V+NA I   N ++E +K++
Sbjct: 203 EKKAGEGVEESELVR--GVVIDKEVVHPRMPKRVENAKIALINEALEVKKTE 252



 Score = 34.7 bits (78), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 504 LHPRVITEGFTQARLKALEVLESLKI-TTPPSREILLDVARTSLRTKVERELADLLAEPN 562
           +HP +I +G+  A  KA E+L+ + I   P   E LL +A TS+  K      +LLA+  
Sbjct: 119 IHPSIIIKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKL- 177

Query: 563 SVPSLRNSATVNSGFDAQDTL-VKLQEACGE 592
           +V +++  A    G    D   +K ++  GE
Sbjct: 178 AVEAVKQVAEKKDGKYVVDLDNIKFEKKAGE 208


>sp|P61111|THSA_PYRKO Thermosome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
           BAA-918 / JCM 12380 / KOD1) GN=thsA PE=3 SV=1
          Length = 548

 Score =  166 bits (420), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 171/332 (51%), Gaps = 39/332 (11%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           LV+GVV++    HP MPK V+NA I   N ++E +K+       +I++     +Q+    
Sbjct: 215 LVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDA---KINITS--PDQLM--- 266

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
            S + +    + DM                             +   A   +     + G
Sbjct: 267 -SFLEQEEKMLKDM-----------------------------VDHIAQTGANVVFVQKG 296

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A+ GI+A+RR K+ +ME+L+ A G   + +V+ L P  LGYA  V E  L 
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLA 356

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
            E   FVE CKNP++VTIL++G  +H + + + A+ D ++ +K+ ++DGAV+P  GA E+
Sbjct: 357 GENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEI 416

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
                L  Y   V GK  L I+ +A+AL IIPKT+A N+G D  + LVK+  +  +  G+
Sbjct: 417 ELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVI-SEHKNRGL 475

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
            +G+DV  G+  +    GI + L VK+Q I S
Sbjct: 476 GIGIDVFEGKPADMLEKGIIEPLRVKKQAIKS 507



 Score = 41.2 bits (95), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 27/40 (67%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           +S LV+GVV+D    HP MPK V+NA I   N ++E +K+
Sbjct: 212 ESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKT 251



 Score = 41.2 bits (95), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 26/39 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           +QHP A ++   +   D   GDGTT+ V++ GELL++A+
Sbjct: 74  LQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAE 112



 Score = 38.9 bits (89), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 26/38 (68%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 162
           LV+GVV++    HP MPK V+NA I   N ++E +K++
Sbjct: 215 LVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTE 252



 Score = 35.4 bits (80), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 69  EERAHPDMQHQHGIREEGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 120
           E++A   ++    +R  GVV++    HP MPK V+NA I   N ++E +K++
Sbjct: 203 EKKAGEGVEESELVR--GVVIDKEVVHPRMPKRVENAKIALINEALEVKKTE 252



 Score = 34.7 bits (78), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 504 LHPRVITEGFTQARLKALEVLESLKI-TTPPSREILLDVARTSLRTKVERELADLLAEPN 562
           +HP +I +G+  A  KA E+L+ + I   P   E LL +A TS+  K      +LLA+  
Sbjct: 119 IHPSIIIKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKL- 177

Query: 563 SVPSLRNSATVNSGFDAQDTL-VKLQEACGE 592
           +V +++  A    G    D   +K ++  GE
Sbjct: 178 AVEAVKQVAEKKDGKYVVDLDNIKFEKKAGE 208


>sp|O26320|THSA_METTH Thermosome subunit alpha OS=Methanothermobacter thermautotrophicus
           (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
           / Delta H) GN=thsA PE=3 SV=2
          Length = 542

 Score =  164 bits (414), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 136/215 (63%), Gaps = 2/215 (0%)

Query: 284 RTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEH 343
           + GID  +L   +REGI+AL+R K+ +++R+  A G   + +++ L    LG AG ++E 
Sbjct: 287 QKGIDDLALHYLSREGIMALKRVKKSDIKRIEKATGARLVTNIDDLTAEDLGEAGVIYEK 346

Query: 344 VLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGA 403
            + +E  TF+EEC++P++++I+L+G  KH   + + A+ D +  + +T++D  VV G GA
Sbjct: 347 KIFDEVLTFIEECRDPKAISIILRGSTKHVAEEMERALEDAIGVVASTLEDREVVAGGGA 406

Query: 404 FEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEA 463
            EV     L+ Y +T+ G+ +L + A+A+AL I+PKT+A N+G D+ D LV L+ A  E+
Sbjct: 407 PEVEIARKLREYADTISGREQLAVSAFADALEIVPKTLAENAGLDSIDVLVDLRAAHEES 466

Query: 464 PGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
           P   +G+DV  G +++   AG+ +   VK+Q I S
Sbjct: 467 P--YMGIDVFDGNIVDMKEAGVIEPQRVKKQAIQS 499



 Score = 42.4 bits (98), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 27/42 (64%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYI 263
           I HP A ++   +   +D  GDGTT+ V++ GELLK+A+  I
Sbjct: 73  ISHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKEAEKLI 114



 Score = 38.9 bits (89), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           N+G D+ D LV L+ A  E+P   +G+DV  G +++   AG+ +   VK+Q I S
Sbjct: 447 NAGLDSIDVLVDLRAAHEESP--YMGIDVFDGNIVDMKEAGVIEPQRVKKQAIQS 499



 Score = 34.7 bits (78), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 503 GLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLAE 560
           G+HP +I  G+  A LKA E+LE + +     R+ L+ VA T++  K      + LAE
Sbjct: 117 GVHPTIIALGYRNAALKAQEILEEISMEA-SDRDTLMKVAITAMTGKGSERAKEKLAE 173


>sp|O93624|THS_METTL Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths
           PE=1 SV=1
          Length = 544

 Score =  164 bits (414), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 171/336 (50%), Gaps = 46/336 (13%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           L+ GV+++     P MPK ++NA I   N  +E +++       EI        +I  PT
Sbjct: 210 LINGVLIDKERVSPQMPKKIENAKIALLNCPIEVKETET---DAEI--------RITDPT 258

Query: 227 A--SLIARASTAMDDM--TGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDR 282
                I +    + DM  T   + + VL                          C     
Sbjct: 259 KLMEFIEQEEKMLKDMVDTIKASGANVLF-------------------------C----- 288

Query: 283 YRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFE 342
            + GID  +    A+EGI+A+RR K+ +ME+LS A G   + +++ L+   LG AG V E
Sbjct: 289 -QKGIDDLAQHYLAKEGILAVRRVKKSDMEKLSKATGANVVTNIKDLKAEDLGEAGIVEE 347

Query: 343 HVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAG 402
             +  +   FVEECK+P++VT+L++G  +H + +   AV D +  +  TI+DG +V G G
Sbjct: 348 RKIAGDAMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAIGVVACTIEDGKIVAGGG 407

Query: 403 AFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE 462
           A E+     L++Y   V G+ +L ++A+A+AL ++P+T+A N+G DA + LVKL+    E
Sbjct: 408 AAEIELAMKLRDYAEGVSGREQLAVRAFADALEVVPRTLAENAGLDAIEMLVKLRAKHAE 467

Query: 463 APGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
                 G++V +G+V N T  G+ + L VK Q I S
Sbjct: 468 GNNAYYGLNVFTGDVENMTENGVVEPLRVKTQAIQS 503



 Score = 38.5 bits (88), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           N+G DA + LVKL+    E      G++V +G+V N T  G+ + L VK Q I S
Sbjct: 449 NAGLDAIEMLVKLRAKHAEGNNAYYGLNVFTGDVENMTENGVVEPLRVKTQAIQS 503



 Score = 37.7 bits (86), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 26/39 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           ++HP A ++   +   +   GDGTT+ V++ GELL++A+
Sbjct: 72  VEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAE 110


>sp|Q9V2Q7|THS_PYRAB Thermosome subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ths
           PE=3 SV=1
          Length = 550

 Score =  163 bits (413), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 170/332 (51%), Gaps = 39/332 (11%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           L++GVV++    HP MPK V+ A I   N ++E +++       EI +      Q+Q   
Sbjct: 215 LIRGVVIDKEVVHPGMPKRVEKAKIALINDALEVKETETDA---EIRITS--PEQLQA-- 267

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
                                        L+Q +  + E+  K+ +   +       + G
Sbjct: 268 ----------------------------FLEQEEKMLKEMVDKIKEVGANVVF---VQKG 296

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A+ GI+A+RR K+ +ME+L+ A G   + ++  L P  LG A  V E  + 
Sbjct: 297 IDDLAQHYLAKYGILAVRRVKKSDMEKLAKATGAKIVTNIRDLTPEDLGEAELVEERKVA 356

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
            E   FVE CKNP++VTIL++G  +H + + + A+ D ++ +K+ ++DG ++ G GA E+
Sbjct: 357 GENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDILEDGKIIAGGGAAEI 416

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
                L  Y   V GK +L I+A+AEAL +IP+T+A N+G D  +TLVK+  A  E  G 
Sbjct: 417 ELSIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGP 475

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
            +G+DV  GE  +    G+ + + VK+Q I S
Sbjct: 476 TIGIDVYEGEPADMMERGVIEPVRVKKQAIKS 507



 Score = 43.1 bits (100), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 26/39 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           IQHP A ++   +   D   GDGTT+ V++ GELLK+A+
Sbjct: 74  IQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAE 112



 Score = 38.1 bits (87), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 26/40 (65%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           D+ L++GVV+D    HP MPK V+ A I   N ++E +++
Sbjct: 212 DTKLIRGVVIDKEVVHPGMPKRVEKAKIALINDALEVKET 251



 Score = 35.0 bits (79), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 504 LHPRVITEGFTQARLKALEVLESL-KITTPPSREILLDVARTSLRTKVERELADLLA 559
           +HP ++ +G+  A  KA E+L+S+ K   P   E+LL  A T++  K   E  + LA
Sbjct: 119 IHPSIVIKGYMLAAEKAQEILDSIAKEVKPDDEEVLLKAAMTAITGKAAEEEREYLA 175



 Score = 34.7 bits (78), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 25/38 (65%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 162
           L++GVV++    HP MPK V+ A I   N ++E ++++
Sbjct: 215 LIRGVVIDKEVVHPGMPKRVEKAKIALINDALEVKETE 252



 Score = 34.7 bits (78), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           N+G D  +TLVK+  A  E  G  +G+DV  GE  +    G+ + + VK+Q I S
Sbjct: 454 NAGLDPIETLVKVIAAHKE-KGPTIGIDVYEGEPADMMERGVIEPVRVKKQAIKS 507


>sp|Q53546|THS_DESSY Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3
           SV=1
          Length = 545

 Score =  162 bits (411), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 169/332 (50%), Gaps = 39/332 (11%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           L++GVV++    HP MPK V+NA I   N ++E +++       EI +      Q+Q   
Sbjct: 215 LIRGVVIDKEVVHPGMPKRVENAKIALINDALEVKETETDA---EIRITS--PEQLQA-- 267

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
                                        L+Q +  + E+  K+ +   +       + G
Sbjct: 268 ----------------------------FLEQEERMLREMVDKIKEVGANVVF---VQKG 296

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A+ GI+A+RR K+ +ME+L+ A G   + +V  L P  LG A  V +  + 
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVA 356

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
            E   FVE CKNP++VTIL++G  +H + + + A+ D ++ +K+ ++DG ++P  GA E+
Sbjct: 357 GENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKILPAGGAPEI 416

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
                L  Y   V GK +L I+A+AEAL +IP+T+A N+G D  +TLVK+  A  E  G 
Sbjct: 417 ELAIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPVETLVKVIAAHKE-KGP 475

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
            +GVDV  GE  +    G+   L V +Q I S
Sbjct: 476 TIGVDVFEGEPADMMEKGVIAPLRVPKQAIKS 507



 Score = 43.5 bits (101), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 26/39 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           IQHP A ++   +   D   GDGTT+ V++ GELLK+A+
Sbjct: 74  IQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAE 112



 Score = 38.5 bits (88), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 27/40 (67%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           ++ L++GVV+D    HP MPK V+NA I   N ++E +++
Sbjct: 212 ETQLIRGVVIDKEVVHPGMPKRVENAKIALINDALEVKET 251



 Score = 37.0 bits (84), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 26/38 (68%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 162
           L++GVV++    HP MPK V+NA I   N ++E ++++
Sbjct: 215 LIRGVVIDKEVVHPGMPKRVENAKIALINDALEVKETE 252



 Score = 33.9 bits (76), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 504 LHPRVITEGFTQARLKALEVLESL-KITTPPSREILLDVARTSLRTKVERELADLLAEPN 562
           +HP +I +G+  A  KA E+LE + K  +P   E L   A TS+  K   E  + LAE  
Sbjct: 119 IHPSIIIKGYALAAEKAQEILEGIAKEVSPDDVETLKKAAVTSITGKAAEEEREYLAEI- 177

Query: 563 SVPSLRNSA 571
           +V ++R  A
Sbjct: 178 AVEAVRQVA 186


>sp|O28821|THSB_ARCFU Thermosome subunit beta OS=Archaeoglobus fulgidus (strain ATCC
           49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
           GN=thsB PE=3 SV=1
          Length = 545

 Score =  161 bits (408), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 170/332 (51%), Gaps = 39/332 (11%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           LV G+VL+    HP MPK V+NA IL  + ++E  K ++   +  I+  + +   I+   
Sbjct: 215 LVDGIVLDKEVVHPGMPKRVENAKILLLDSALEV-KETEIDAKIRITDPEKLQKFIEQEE 273

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
           A L       +D +   G                                C      + G
Sbjct: 274 AML----KEMVDKIVNAGANVVF---------------------------C------QKG 296

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A+ G++A+RR K+ +ME+L+ A G   +  +  +    LG A  V E  +G
Sbjct: 297 IDDLAQYYLAKAGVLAVRRVKKSDMEKLAKATGAKVLTDLRDISSEDLGEAALVEERKVG 356

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
           +EK  FV  CKNP++VTIL++G  +H + +    + D +RA+   ++DG VV GAGA E+
Sbjct: 357 DEKMVFVTGCKNPKAVTILVRGGTEHVVEEIARGIEDAVRAVACAVEDGKVVVGAGAPEI 416

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
                L+ +  ++ G+ +L ++A+A AL IIP+T+A N+G D  D LV+L+ A  +    
Sbjct: 417 EVSLKLREWAPSLGGREQLAVEAFATALEIIPRTLAENAGLDPIDVLVELKAAHEKGQKY 476

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
           A GVDV++G+V++    G+++ L VK Q I S
Sbjct: 477 A-GVDVDTGKVVDMKERGVFEPLRVKTQAIGS 507



 Score = 41.6 bits (96), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           ++HP A +I   +   D+  GDGTT+ V++ GELLK+A+
Sbjct: 74  VEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKRAE 112



 Score = 38.9 bits (89), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 27/40 (67%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           ++ LV G+VLD    HP MPK V+NA IL  + ++E +++
Sbjct: 212 ETELVDGIVLDKEVVHPGMPKRVENAKILLLDSALEVKET 251



 Score = 38.9 bits (89), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 27/39 (69%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
           LV G+VL+    HP MPK V+NA IL  + ++E +++++
Sbjct: 215 LVDGIVLDKEVVHPGMPKRVENAKILLLDSALEVKETEI 253



 Score = 38.5 bits (88), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           N+G D  D LV+L+ A  +    A GVDV++G+V++    G+++ L VK Q I S
Sbjct: 454 NAGLDPIDVLVELKAAHEKGQKYA-GVDVDTGKVVDMKERGVFEPLRVKTQAIGS 507



 Score = 36.6 bits (83), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 26/37 (70%)

Query: 85  EGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           +G+VL+    HP MPK V+NA IL  + ++E +++++
Sbjct: 217 DGIVLDKEVVHPGMPKRVENAKILLLDSALEVKETEI 253


>sp|O24731|THSA_THEK8 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA
           PE=3 SV=1
          Length = 549

 Score =  160 bits (406), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 170/332 (51%), Gaps = 39/332 (11%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           LV+GVV++    HP MPK V+ A I   N ++E +K+       +I++     +Q+    
Sbjct: 215 LVRGVVIDKEVVHPRMPKRVEGAKIALINEALEVKKTET---DAKINITS--PDQLM--- 266

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
            S + +    + DM                             +   A   +     + G
Sbjct: 267 -SFLEQEEKMLKDM-----------------------------VDHIAQTGANVVFVQKG 296

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A+ GI+A+RR K+ +ME+L+ A G   + +V+ L P  LGYA  V E  L 
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEIVEERKLA 356

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
            E   FVE CKNP++VTIL++G  +H + + + A+ D ++ +K+ ++DGAV+P  GA E+
Sbjct: 357 GENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEI 416

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
               ++  Y   V GK  L I+ +A+AL IIPKT+A N+G D  + LVK+  +  +  G+
Sbjct: 417 ELAISVDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEILVKVI-SEHKNKGL 475

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
            +G+DV +GE  +    GI   L V +Q I S
Sbjct: 476 GIGIDVFAGEPADMLERGIIAPLRVTKQAIKS 507



 Score = 40.8 bits (94), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 26/39 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           +QHP A ++   +   D   GDGTT+ V++ GELL++A+
Sbjct: 74  LQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAE 112



 Score = 38.1 bits (87), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 26/40 (65%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           +S LV+GVV+D    HP MPK V+ A I   N ++E +K+
Sbjct: 212 ESELVRGVVIDKEVVHPRMPKRVEGAKIALINEALEVKKT 251



 Score = 36.6 bits (83), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 504 LHPRVITEGFTQARLKALEVLESLKI-TTPPSREILLDVARTSLRTKVERELADLLAEPN 562
           +HP +I +G+  A  KA E+LE + I   P   E LL +A TS+  K      +LLA+  
Sbjct: 119 IHPSIIIKGYALAAEKAQEILEEIAIKVNPDDEETLLRIAMTSITGKNAESHKELLAKL- 177

Query: 563 SVPSLRNSATVNSGFDAQDTL-VKLQEACGE 592
           +V +++  A    G    D   +K ++  GE
Sbjct: 178 AVDAVKQVAEKKDGKYVVDLDNIKFEKKAGE 208



 Score = 35.8 bits (81), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 162
           LV+GVV++    HP MPK V+ A I   N ++E +K++
Sbjct: 215 LVRGVVIDKEVVHPRMPKRVEGAKIALINEALEVKKTE 252


>sp|Q9V2T3|THSB_DESMO Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis
           GN=thsB PE=3 SV=1
          Length = 502

 Score =  159 bits (403), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 172/327 (52%), Gaps = 40/327 (12%)

Query: 166 ILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHP 225
           +LV G+VL+    HP MP+ V+NA I+  +  +E EK       PEI     I +  Q  
Sbjct: 198 MLVYGIVLDKEVVHPGMPRRVENAKIVLLDAPLEIEK-------PEIDAEIRINDPEQ-- 248

Query: 226 TASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKM-HKFAPDCSTSDRYR 284
                                     + + L+Q +    E+ +KM  K A   +     +
Sbjct: 249 --------------------------LEKFLQQEE----EILMKMVDKIASVGANVVVCQ 278

Query: 285 TGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHV 344
            GID  +    A++GI+A+RR KR ++E+L  A GG  ++++E L P  LGYA  V E  
Sbjct: 279 KGIDEVAQHFLAKKGILAVRRVKRSDLEKLERATGGRIVSNIEDLTPEDLGYAALVEERK 338

Query: 345 LGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAF 404
           +GE+K  F+E CKNP+SV+I+++G  +  + + + ++RD L A+ + + DG V+PG GA 
Sbjct: 339 VGEDKMVFIEGCKNPRSVSIVIRGGLERLVDEAERSIRDALSAVADALRDGKVIPGGGAA 398

Query: 405 EVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAP 464
           E+     ++     V GK +L I+A+A+AL  +  T+  N+G D  D ++KL+ A     
Sbjct: 399 EIELAKHIRRLATRVGGKEQLAIEAFAKALEGLAVTLVENAGLDPIDMVMKLRAAHERED 458

Query: 465 GVAVGVDVNSGEVLNPTSAGIYDNLTV 491
           G  + +D+ +G+++N    G+ + +++
Sbjct: 459 GKYLSIDLATGDLVNMREKGVIEPVSI 485



 Score = 42.0 bits (97), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 25/39 (64%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEK 52
           DS LV G+VLD    HP MP+ V+NA I+  +  +E EK
Sbjct: 196 DSMLVYGIVLDKEVVHPGMPRRVENAKIVLLDAPLEIEK 234



 Score = 40.8 bits (94), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           +IQHP A ++ + + + D   GDGT   V++ GELLK A+
Sbjct: 57  EIQHPAAKMLVQVAKSQDSEVGDGTKRAVILAGELLKYAE 96



 Score = 37.7 bits (86), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 26/40 (65%)

Query: 124 ILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
           +LV G+VL+    HP MP+ V+NA I+  +  +E EK ++
Sbjct: 198 MLVYGIVLDKEVVHPGMPRRVENAKIVLLDAPLEIEKPEI 237



 Score = 35.0 bits (79), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 23/36 (63%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           G+VL+    HP MP+ V+NA I+  +  +E EK ++
Sbjct: 202 GIVLDKEVVHPGMPRRVENAKIVLLDAPLEIEKPEI 237


>sp|O30561|THS1_HALVD Thermosome subunit 1 OS=Haloferax volcanii (strain ATCC 29605 / DSM
           3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 /
           DS2) GN=cct1 PE=1 SV=1
          Length = 560

 Score =  158 bits (399), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 138/213 (64%), Gaps = 1/213 (0%)

Query: 286 GIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVL 345
           GID  +    A+EGI+A+RRAK  +++RL+ A GG  ++S++ +E   LG+AGSV +  +
Sbjct: 294 GIDDMAQHYLAKEGILAVRRAKSSDLKRLARATGGRVVSSLDDIEADDLGFAGSVGQKDV 353

Query: 346 GEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFE 405
           G ++  FVE+ ++ +SVT++L+G  +H + + + A+ D L  ++ T++DG V+PG GA E
Sbjct: 354 GGDERIFVEDVEDAKSVTLILRGGTEHVVDELERAIEDSLGVVRTTLEDGKVLPGGGAPE 413

Query: 406 VAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPG 465
                 L+ + ++V G+ +L ++A+AEAL IIP+T+A N+G D  D+LV L+ +  +   
Sbjct: 414 TELSLQLREFADSVGGREQLAVEAFAEALDIIPRTLAENAGLDPIDSLVDLR-SRHDGGE 472

Query: 466 VAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
            A G+D  +GEV++    G+ + L VK Q I S
Sbjct: 473 FAAGLDAYTGEVIDMEEEGVVEPLRVKTQAIES 505



 Score = 40.8 bits (94), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 25/39 (64%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           I HP A++I   S   +D  GDGTT+ V+  GELL QA+
Sbjct: 76  IDHPAANMIVEVSETQEDEVGDGTTTAVINAGELLDQAE 114



 Score = 36.2 bits (82), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 19/105 (18%)

Query: 457 QEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQA 516
           ++  G+    AV   +N+GE+L+                    + S +H   I +G+ QA
Sbjct: 92  EDEVGDGTTTAV---INAGELLDQA---------------EDLLDSDVHATTIAQGYRQA 133

Query: 517 RLKALEVLESLKI-TTPPSREILLDVARTSLRTKVERELADLLAE 560
             KA EVLE   I  T   RE L  +A T++  K      DLL+E
Sbjct: 134 AEKAKEVLEDNAIEVTEDDRETLTKIAATAMTGKGAESAKDLLSE 178


>sp|O28045|THSA_ARCFU Thermosome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
           49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
           GN=thsA PE=3 SV=1
          Length = 545

 Score =  157 bits (397), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 172/332 (51%), Gaps = 39/332 (11%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           LV G+V++    HP MPK VKNA I     ++E +++       EI        +I  P 
Sbjct: 215 LVNGIVIDKEVVHPGMPKRVKNAKIAVLKAALEVKETET---DAEI--------RITDPD 263

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
             +                        + ++Q +  + E+   + + A   +     + G
Sbjct: 264 QLM------------------------KFIEQEEKMLKEM---VDRLAEAGANVVFCQKG 296

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A+ GI+A+RR K+ ++E+++ ACG   +  +  +  A LG A  V E  +G
Sbjct: 297 IDDLAQYYLAKAGILAVRRVKQSDIEKIAKACGAKIITDLREITSADLGEAELVEERKVG 356

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
           +EK  F+E CKNP++VTIL++G ++H + + + +++D ++ +K  ++ G VV G GA E+
Sbjct: 357 DEKMVFIEGCKNPKAVTILIRGGSEHVVDEVERSLQDAIKVVKTALESGKVVAGGGAPEI 416

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
                ++++  T+ G+ +L  +A+A AL +IP+ +A NSG D  D LV+L++A  E    
Sbjct: 417 EVALKIRDWAPTLGGREQLAAEAFASALEVIPRALAENSGLDPIDILVELRKAHEEGK-T 475

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
             GVDV SGEV      G+ + L VK Q I S
Sbjct: 476 TYGVDVFSGEVACMKERGVLEPLKVKTQAITS 507



 Score = 41.6 bits (96), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           ++HP A +I   +   D+  GDGTT+ V++ GELLK+A+
Sbjct: 74  VEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKKAE 112



 Score = 40.4 bits (93), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 38/225 (16%)

Query: 13  GDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGSGPWCATPGHAQVREERA 72
            D+ LV G+V+D    HP MPK VKNA I     ++E ++        T   A++R    
Sbjct: 211 ADTKLVNGIVIDKEVVHPGMPKRVKNAKIAVLKAALEVKE--------TETDAEIR--IT 260

Query: 73  HPDMQHQHGIREEGVVLNHGARHPDMPKSVKNAHILTCNISM----EYEKSDVCIILVKG 128
            PD   +   +EE ++     R  +       A+++ C   +    +Y  +   I+ V+ 
Sbjct: 261 DPDQLMKFIEQEEKMLKEMVDRLAEA-----GANVVFCQKGIDDLAQYYLAKAGILAVRR 315

Query: 129 VVLNH--------GARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKG--------VV 172
           V  +         GA+     + + +A +    +  E +  D  ++ ++G        ++
Sbjct: 316 VKQSDIEKIAKACGAKIITDLREITSADLGEAELVEERKVGDEKMVFIEGCKNPKAVTIL 375

Query: 173 LNHGARH--PDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLA 215
           +  G+ H   ++ +S+++A I     ++E  K   GG  PEI +A
Sbjct: 376 IRGGSEHVVDEVERSLQDA-IKVVKTALESGKVVAGGGAPEIEVA 419



 Score = 37.4 bits (85), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           NSG D  D LV+L++A  E      GVDV SGEV      G+ + L VK Q I S
Sbjct: 454 NSGLDPIDILVELRKAHEEGK-TTYGVDVFSGEVACMKERGVLEPLKVKTQAITS 507


>sp|P48424|THSA_THEAC Thermosome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
           25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
           GN=thsA PE=1 SV=1
          Length = 545

 Score =  157 bits (397), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 173/334 (51%), Gaps = 39/334 (11%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
            + G+V++    H  MP  VKNA I   + ++E +K+     + E  +      QI  P+
Sbjct: 212 FISGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKT-----EIEAKV------QISDPS 260

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
                                    I + L Q      ++  K+ K   +     +   G
Sbjct: 261 K------------------------IQDFLNQETNTFKQMVEKIKKSGANVVLCQK---G 293

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A+EGI A+RR K+ +ME+L+ A G   +  ++ L P+ LG A +V E  +G
Sbjct: 294 IDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIG 353

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
           +++ TFV  CKNP++V+IL++G   H +++ + A+ D +R +  T +DG  + G GA E 
Sbjct: 354 DDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEA 413

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
                L  Y N+V G+ +L I+A+A+AL IIP+T+A N+G D  +TL+KL+ A  E   +
Sbjct: 414 ELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLK-AEHEKGRI 472

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWI 500
           +VGVD+++  V +  + G+ D L VK   + S +
Sbjct: 473 SVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAV 506



 Score = 47.8 bits (112), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 29/42 (69%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYI 263
           ++HPTA +I   S A D   GDGTT+ V++ GELLKQA+  +
Sbjct: 73  VEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLL 114


>sp|Q52500|THSB_PYRKO Thermosome subunit beta OS=Pyrococcus kodakaraensis (strain ATCC
           BAA-918 / JCM 12380 / KOD1) GN=thsB PE=3 SV=1
          Length = 546

 Score =  156 bits (395), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 167/332 (50%), Gaps = 39/332 (11%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           L+KGVV++    HP MPK V+ A I   N ++E +++       EI +      Q+Q   
Sbjct: 215 LIKGVVIDKEVVHPGMPKRVEGAKIALINEALEVKETE---TDAEIRITS--PEQLQA-- 267

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
                                        L+Q +  + E+  K+ +   +       + G
Sbjct: 268 ----------------------------FLEQEEKMLREMVDKIKEVGANVVF---VQKG 296

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A+ GI+A+RR K+ +ME+L+ A G   + +V  L P  LG A  V +  + 
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVA 356

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
            E   FVE CKNP++VTIL++G  +H + + + A+ D ++ +K+ ++DG +V   GA E+
Sbjct: 357 GENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEI 416

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
                L  Y   V GK +L I+A+AEAL +IP+T+A N+G D  +TLVK+  A  E  G 
Sbjct: 417 ELAIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGP 475

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
            +GVDV  GE  +    G+   + V +Q I S
Sbjct: 476 TIGVDVFEGEPADMLERGVIAPVRVPKQAIKS 507



 Score = 42.4 bits (98), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           IQHP A ++   +   D   GDGTT+ V++ GELL++A+
Sbjct: 74  IQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAE 112



 Score = 38.9 bits (89), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           D+ L+KGVV+D    HP MPK V+ A I   N ++E +++
Sbjct: 212 DTQLIKGVVIDKEVVHPGMPKRVEGAKIALINEALEVKET 251



 Score = 35.4 bits (80), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 25/38 (65%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 162
           L+KGVV++    HP MPK V+ A I   N ++E ++++
Sbjct: 215 LIKGVVIDKEVVHPGMPKRVEGAKIALINEALEVKETE 252



 Score = 33.5 bits (75), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 504 LHPRVITEGFTQARLKALEVLESL-KITTPPSREILLDVARTSLRTKVERELADLLAE 560
           +HP +I +G+  A  KA E+L+ + K      REIL   A TS+  K   E  + LAE
Sbjct: 119 IHPSIIIKGYALAAEKAQEILDEIAKDVDVEDREILKKAAVTSITGKAAEEEREYLAE 176


>sp|O24730|THSB_THEK1 Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB
           PE=3 SV=2
          Length = 546

 Score =  156 bits (394), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 167/332 (50%), Gaps = 39/332 (11%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           L+KGVV++    HP MPK V+ A I   N ++E +++       EI +      Q+Q   
Sbjct: 215 LIKGVVIDKEVVHPGMPKRVEGAKIALINEALEVKETE---TDAEIRITS--PEQLQA-- 267

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
                                        L+Q +  + E+  K+ +   +       + G
Sbjct: 268 ----------------------------FLEQEEKMLREMVDKIKEVGANVVF---VQKG 296

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A+ GI+A+RR K+ +ME+L+ A G   + +V  L P  LG A  V +  + 
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVA 356

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
            E   FVE CKNP++VTIL++G  +H + + + A+ D ++ +K+ ++DG +V   GA E+
Sbjct: 357 GENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEI 416

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
                L  Y   V GK +L I+A+AEAL +IP+T+A N+G D  +TLVK+  A  E  G 
Sbjct: 417 ELSIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGP 475

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
            +GVDV  GE  +    G+   + V +Q I S
Sbjct: 476 TIGVDVFEGEPADMLERGVIAPVRVPKQAIKS 507



 Score = 42.4 bits (98), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           IQHP A ++   +   D   GDGTT+ V++ GELL++A+
Sbjct: 74  IQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAE 112



 Score = 38.9 bits (89), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           D+ L+KGVV+D    HP MPK V+ A I   N ++E +++
Sbjct: 212 DTQLIKGVVIDKEVVHPGMPKRVEGAKIALINEALEVKET 251



 Score = 35.4 bits (80), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 25/38 (65%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 162
           L+KGVV++    HP MPK V+ A I   N ++E ++++
Sbjct: 215 LIKGVVIDKEVVHPGMPKRVEGAKIALINEALEVKETE 252



 Score = 33.5 bits (75), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 504 LHPRVITEGFTQARLKALEVLESL-KITTPPSREILLDVARTSLRTKVERELADLLAE 560
           +HP +I +G+  A  KA E+L+ + K      REIL   A TS+  K   E  + LAE
Sbjct: 119 IHPSIIIKGYALAAEKAQEILDEIAKDVDVEDREILKKAAVTSITGKAAEEEREYLAE 176


>sp|P50016|THS_METKA Thermosome subunit OS=Methanopyrus kandleri (strain AV19 / DSM 6324
           / JCM 9639 / NBRC 100938) GN=ths PE=3 SV=1
          Length = 545

 Score =  155 bits (393), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 170/332 (51%), Gaps = 39/332 (11%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           LVKG+V++    HP MP+ V+NA I   N  +E +++       EI +      Q+Q   
Sbjct: 217 LVKGMVIDKERVHPGMPRRVENAKIALLNCPIEVKETET---DAEIRITD--PEQLQ--- 268

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
            + I      + +M                             + K A   +     + G
Sbjct: 269 -AFIEEEERMLSEM-----------------------------VDKIAETGANVVFCQKG 298

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A++GI+A+RR K+ +M++L+ A G   + +++ L    LG A  V E  + 
Sbjct: 299 IDDLAQHYLAKKGILAVRRVKKSDMQKLARATGARIVTNIDDLSEEDLGEAEVVEEKKVA 358

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
            +K  FVE CK+P++VTIL++G  +H + + + A+ D +  +   ++DG VV G GA EV
Sbjct: 359 GDKMIFVEGCKDPKAVTILIRGGTEHVVDEAERAIEDAIGVVAAALEDGKVVAGGGAPEV 418

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
                L+++ + V+G+ +L ++A+A+AL IIP+T+A NSG D  D LV+L+ A  E   V
Sbjct: 419 EVARQLRDFADGVEGREQLAVEAFADALEIIPRTLAENSGLDPIDVLVQLR-AKHEDGQV 477

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
             G+DV  G+V +    G+ + L VK Q + S
Sbjct: 478 TAGIDVYDGDVKDMLEEGVVEPLRVKTQALAS 509



 Score = 39.7 bits (91), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 26/39 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           I+HP A ++   +   +D  GDGTT+ V++ GELL +A+
Sbjct: 76  IEHPAAKMVVEVAKTQEDEVGDGTTTAVVLAGELLHKAE 114



 Score = 38.5 bits (88), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 5/68 (7%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHI--LTCNISMEYEKSGSGPWCATPGHAQV---R 68
           D+ LVKG+V+D    HP MP+ V+NA I  L C I ++  ++ +      P   Q     
Sbjct: 214 DTELVKGMVIDKERVHPGMPRRVENAKIALLNCPIEVKETETDAEIRITDPEQLQAFIEE 273

Query: 69  EERAHPDM 76
           EER   +M
Sbjct: 274 EERMLSEM 281



 Score = 35.0 bits (79), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHI--LTCNISMEYEKSDVCI 165
           LVKG+V++    HP MP+ V+NA I  L C I ++  ++D  I
Sbjct: 217 LVKGMVIDKERVHPGMPRRVENAKIALLNCPIEVKETETDAEI 259



 Score = 34.3 bits (77), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628
           NSG D  D LV+L+ A  E   V  G+DV  G+V +    G+ + L VK Q + S
Sbjct: 456 NSGLDPIDVLVQLR-AKHEDGQVTAGIDVYDGDVKDMLEEGVVEPLRVKTQALAS 509


>sp|Q9HN70|THSA_HALSA Thermosome subunit alpha OS=Halobacterium salinarum (strain ATCC
           700922 / JCM 11081 / NRC-1) GN=thsA PE=3 SV=2
          Length = 562

 Score =  153 bits (387), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 136/214 (63%), Gaps = 1/214 (0%)

Query: 285 TGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHV 344
           +GID  +    A+EGI+A+RRAK  +  RLS A G T +++V  +E A LG AGSV +  
Sbjct: 292 SGIDDMAQHYLAKEGILAVRRAKSDDFTRLSRATGATPVSNVNDIEAADLGAAGSVAQKD 351

Query: 345 LGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAF 404
           +G ++  FVE+ +  +SVT++L+G  +H + + + A+ D L  ++ T++DG V+PG GA 
Sbjct: 352 IGGDERIFVEDVEEAKSVTLILRGGTEHVVDEVERAIEDSLGVVRVTLEDGQVMPGGGAP 411

Query: 405 EVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAP 464
           E      L+++ ++V G+ +L ++A+A+AL +IP+T+A N+G D  D+LV L+ +  +  
Sbjct: 412 ETELAMQLRDFADSVGGREQLAVEAFADALEVIPRTLAENAGHDPIDSLVDLR-SQHDGG 470

Query: 465 GVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
               G+D  +G+V++  S GI + L VK Q I S
Sbjct: 471 DTEAGLDAYNGDVIDMESEGIVEPLRVKTQAIES 504



 Score = 39.3 bits (90), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 28/42 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYI 263
           I+HP A++I   +   +   GDGTT++V+V GELL +A+  +
Sbjct: 75  IEHPAANMIVEVAETQETEVGDGTTTSVVVSGELLSEAETLL 116


>sp|O24732|THSB_THEK8 Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB
           PE=3 SV=1
          Length = 545

 Score =  151 bits (382), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 167/332 (50%), Gaps = 39/332 (11%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           L+KGVV++    HP M K V+ A I   N ++E +++       EI +      Q+Q   
Sbjct: 215 LIKGVVIDKEVVHPGMRKRVEGAKIALINEALEVKETET---DAEIRITS--PEQLQA-- 267

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
                                        L+Q +  + E+  K+ +   +       + G
Sbjct: 268 ----------------------------FLEQEEKMLREMVDKIKEVGANVVF---VQKG 296

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A+ GI+A+RR K+ +ME+L+ A G   + +V  L P  LG A  V +  + 
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVA 356

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
            E   FVE CKNP++VTIL++G  +H + + + A+ D ++ +K+ ++DG +V   GA E+
Sbjct: 357 GENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEI 416

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
               ++  Y   V GK +L I+A+AEAL +IP+T+A N+G D  +TLVK+  A  E  G 
Sbjct: 417 ELAISVDEYAKEVGGKEQLAIEAFAEALKVIPRTLAGNAGLDPIETLVKVIAAHKE-KGP 475

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
            +GVDV  GE  +    G+   + V +Q I S
Sbjct: 476 TIGVDVFEGEPADMLERGVIAPVRVPKQAIKS 507



 Score = 42.4 bits (98), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           IQHP A ++   +   D   GDGTT+ V++ GELL++A+
Sbjct: 74  IQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAE 112



 Score = 35.0 bits (79), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKS 53
           D+ L+KGVV+D    HP M K V+ A I   N ++E +++
Sbjct: 212 DTQLIKGVVIDKEVVHPGMRKRVEGAKIALINEALEVKET 251



 Score = 33.5 bits (75), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 504 LHPRVITEGFTQARLKALEVLESL-KITTPPSREILLDVARTSLRTKVERELADLLAE 560
           +HP +I +G+  A  KA E+L+S+ +      REIL   A T++  K   E  + LAE
Sbjct: 119 IHPSIIIKGYALAAEKAQEILDSIARDVDVEDREILKKAAMTAITGKAAEEEREYLAE 176


>sp|O24735|THSB_SULTO Thermosome subunit beta OS=Sulfolobus tokodaii (strain DSM 16993 /
           JCM 10545 / NBRC 100140 / 7) GN=thsB PE=1 SV=1
          Length = 552

 Score =  149 bits (377), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 162/334 (48%), Gaps = 42/334 (12%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIAN--QIQH 224
           ++ G+V++    HP MPK V+NA I   + S+E EK       PE+     I +  Q++ 
Sbjct: 222 IIYGIVVDKEVVHPGMPKRVENAKIALLDASLEVEK-------PELDAEIRINDPTQMKK 274

Query: 225 PTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYR 284
                       +D +   G    +                           C      +
Sbjct: 275 FLEEEENLLKEKVDKIAATGANVVI---------------------------C------Q 301

Query: 285 TGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHV 344
            GID  +    A++GI+A+RRAK+ ++E+L+ A GG  +++++ L P  LGYA  V E  
Sbjct: 302 KGIDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVVSNIDELTPQDLGYAALVEERK 361

Query: 345 LGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAF 404
           +GE+K  FVE  KNP++V+IL++G  +  + +T+ A+RD L  + + I DG  V G GA 
Sbjct: 362 VGEDKMVFVEGAKNPKAVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAV 421

Query: 405 EVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAP 464
           E+     L+ Y   + GK +L I+AYA AL  +   +  N G+D  D LVKL+ A     
Sbjct: 422 ELEIAKRLRKYAPQIGGKEQLAIEAYASALENLVMILIENGGYDPIDLLVKLRSAHENEA 481

Query: 465 GVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
               G++V +G+V +    G+ +   VK   I +
Sbjct: 482 NKWYGINVFTGQVEDMWKLGVIEPAVVKMNAIKA 515



 Score = 40.0 bits (92), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 25/39 (64%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEK 52
           D+ ++ G+V+D    HP MPK V+NA I   + S+E EK
Sbjct: 219 DTQIIYGIVVDKEVVHPGMPKRVENAKIALLDASLEVEK 257



 Score = 39.7 bits (91), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 27/39 (69%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           +QHP A L+ + +   D+ T DGT + V++ GEL+K+A+
Sbjct: 81  LQHPAAKLLVQIAKGQDEETADGTKTAVILAGELVKKAE 119



 Score = 35.8 bits (81), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 15/39 (38%), Positives = 25/39 (64%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
           ++ G+V++    HP MPK V+NA I   + S+E EK ++
Sbjct: 222 IIYGIVVDKEVVHPGMPKRVENAKIALLDASLEVEKPEL 260



 Score = 35.4 bits (80), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 11/68 (16%)

Query: 65  AQVREERAHPDMQHQHGIREEG-----------VVLNHGARHPDMPKSVKNAHILTCNIS 113
           A++R +R + D+ +   +++ G           +V++    HP MPK V+NA I   + S
Sbjct: 193 AELRGDRWYVDLDNIQIVKKHGGSINDTQIIYGIVVDKEVVHPGMPKRVENAKIALLDAS 252

Query: 114 MEYEKSDV 121
           +E EK ++
Sbjct: 253 LEVEKPEL 260



 Score = 33.1 bits (74), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 6/71 (8%)

Query: 504 LHPRVITEGFTQARLKALEVLESL-KITTPPSREILLDVARTSLRTKV---ERE-LADLL 558
           +HP +I  GF +A  +AL+ +E + +  +    +IL  VA TSL +K     RE LAD++
Sbjct: 126 IHPTIIVSGFKKAEEQALKTIEEIAQKVSVNDMDILKKVAMTSLNSKAVAGAREYLADIV 185

Query: 559 AEP-NSVPSLR 568
           A+    V  LR
Sbjct: 186 AKAVTQVAELR 196


>sp|Q9V2S9|THSA_SULSO Thermosome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
           35092 / DSM 1617 / JCM 11322 / P2) GN=thsA PE=3 SV=2
          Length = 559

 Score =  147 bits (371), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 168/335 (50%), Gaps = 42/335 (12%)

Query: 166 ILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHP 225
           +LVKG+VL+    HP MP+ V  A I   + ++E EK       PEIS    I +  Q  
Sbjct: 219 VLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEK-------PEISAKISITSPEQ-- 269

Query: 226 TASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRT 285
                                     I   L +   Y+ ++  K+     +     +   
Sbjct: 270 --------------------------IKAFLDEESKYLKDMVDKLASIGANVVICQK--- 300

Query: 286 GIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVL 345
           GID  +    A++GI+A+RR KR ++E+L  A G   ++S++   P  LGYA  V E  +
Sbjct: 301 GIDDIAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRV 360

Query: 346 GEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFE 405
           G +K  F+E  KN ++V ILL+G N   L + + ++ D L A++N + +  ++PG GA E
Sbjct: 361 GNDKMVFIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIE 420

Query: 406 VAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPG 465
           +     L+ Y  +V GK +L I+A+A+AL  IP  +A  +G +A  +L+ L+     A G
Sbjct: 421 LELAMKLREYARSVGGKEQLAIEAFADALEEIPLILAETAGLEAISSLMDLR--ARHAKG 478

Query: 466 VA-VGVDVNSGEVLNPTSA-GIYDNLTVKRQIINS 498
           ++  GVDV  G++++   A  I + + VK Q++ S
Sbjct: 479 LSNTGVDVIGGKIVDDVYALNIIEPIRVKSQVLKS 513



 Score = 43.9 bits (102), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 28/40 (70%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           +IQHP A L+  A+ A D   GDGTTS V++ G LL++A+
Sbjct: 69  EIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAE 108



 Score = 42.7 bits (99), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 2   VELMEMKHKTPG---DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEK 52
           ++L+++  K  G   DS LVKG+VLD    HP MP+ V  A I   + ++E EK
Sbjct: 202 LDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEK 255



 Score = 37.7 bits (86), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 25/41 (60%)

Query: 124 ILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVC 164
           +LVKG+VL+    HP MP+ V  A I   + ++E EK ++ 
Sbjct: 219 VLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEKPEIS 259



 Score = 35.0 bits (79), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 18/108 (16%)

Query: 498 SWIISGLHPRVITEGFTQARLKALEVLESL-------KITTPPSREILLDVARTSLRTKV 550
           S +   +HP +I EG+ +A  KALE+L  L        + +  +R+ L  +A T+L +K 
Sbjct: 109 SLLDQNIHPTIIIEGYKKAYNKALELLPQLGTRIDIKDLNSSVARDTLRKIAFTTLASKF 168

Query: 551 ERELADLLAEPNSVPSLRNSATV-------NSGFDAQDTLVKLQEACG 591
             E A+L    N +  +   A V       N G++    L+K+ +  G
Sbjct: 169 IAEGAEL----NKIIDMVIDAIVNVAEPLPNGGYNVSLDLIKIDKKKG 212


>sp|Q9V2T4|THSB_SULAC Thermosome subunit beta OS=Sulfolobus acidocaldarius (strain ATCC
           33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
           GN=thsB PE=3 SV=2
          Length = 553

 Score =  147 bits (370), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 166/332 (50%), Gaps = 38/332 (11%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           +V G++++    HP MPK V+NA I   + S+E EK       PE+        +I  PT
Sbjct: 222 IVYGIIVDKEVVHPGMPKRVENAKIALLDASLEVEK-------PELDAE----IRINDPT 270

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
                                    + + L + +  + E   K+ K A   +     + G
Sbjct: 271 Q------------------------MKKFLDEEENILKE---KVDKIAQTGANVVICQKG 303

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A++GI+A+RRAK+ ++E+L+ A GG  +++++ L    LGYA  V E  +G
Sbjct: 304 IDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVVSNIDELTSQDLGYATLVEERKIG 363

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
           E+K  F+E  KNP++V+IL++G  +  + +T+ A+RD L  + + + DG  + G GA E 
Sbjct: 364 EDKMVFIEGAKNPKAVSILIRGGLERVVDETERALRDALGTVADVVRDGRAIAGGGAVET 423

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV 466
                L+ Y   V GK +L I+AYA AL  +   +  N GFD  + LVKL+ A       
Sbjct: 424 EIAKRLRKYAPQVGGKEQLAIEAYANALESLVMILIENGGFDPIELLVKLRSAHENETNK 483

Query: 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498
             G++V +G++ +  S G+ +   VK   I +
Sbjct: 484 WHGINVYTGQIQDMWSLGVIEPAVVKMNAIKA 515



 Score = 39.7 bits (91), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 25/39 (64%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEK 52
           D+ +V G+++D    HP MPK V+NA I   + S+E EK
Sbjct: 219 DTQIVYGIIVDKEVVHPGMPKRVENAKIALLDASLEVEK 257



 Score = 38.9 bits (89), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 26/39 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           +QHP A L+ + +   D+ T DGT + V+  GEL+K+A+
Sbjct: 81  LQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAE 119



 Score = 35.8 bits (81), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 15/39 (38%), Positives = 25/39 (64%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
           +V G++++    HP MPK V+NA I   + S+E EK ++
Sbjct: 222 IVYGIIVDKEVVHPGMPKRVENAKIALLDASLEVEKPEL 260



 Score = 34.3 bits (77), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 23/36 (63%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           G++++    HP MPK V+NA I   + S+E EK ++
Sbjct: 225 GIIVDKEVVHPGMPKRVENAKIALLDASLEVEKPEL 260


>sp|P46219|THSA_SULSH Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1
          Length = 560

 Score =  146 bits (368), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 166/335 (49%), Gaps = 42/335 (12%)

Query: 166 ILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHP 225
           +LVKG+VL+    HP MP+ V  A I   + ++E EK       PEIS    I +  Q  
Sbjct: 219 VLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEK-------PEISAKISITSPEQ-- 269

Query: 226 TASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRT 285
                                     I   L +   Y+ ++  K+     +     +   
Sbjct: 270 --------------------------IKAFLDEESKYLKDMVDKLASIGANVVICQK--- 300

Query: 286 GIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVL 345
           GID  +    A++GI+A+RR KR ++E+L  A G   ++S++   P  LGYA  V E  +
Sbjct: 301 GIDDIAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPDDLGYAELVEERRV 360

Query: 346 GEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFE 405
           G +K  F+E  KN ++V ILL+G N   L + + ++ D L A++N + +  ++PG GA E
Sbjct: 361 GNDKMVFIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIE 420

Query: 406 VAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPG 465
           +     L+ Y  +V GK +L I+A+A+AL  IP  +A  +G +A   L+ L+     A G
Sbjct: 421 LELAMKLREYARSVGGKEQLAIEAFADALEEIPTILAETAGLEAISALMDLR--ARHAKG 478

Query: 466 VA-VGVDVNSGEVLNPTSA-GIYDNLTVKRQIINS 498
           +   GVDV  G++++   A  I + + VK Q++ S
Sbjct: 479 LTNTGVDVIGGKIVDDVYALNIIEPIRVKAQVLKS 513



 Score = 43.5 bits (101), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 28/40 (70%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           +IQHP A L+  A+ A D   GDGTTS V++ G LL++A+
Sbjct: 69  EIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAE 108



 Score = 42.7 bits (99), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 2   VELMEMKHKTPG---DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEK 52
           ++L+++  K  G   DS LVKG+VLD    HP MP+ V  A I   + ++E EK
Sbjct: 202 LDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEK 255



 Score = 37.7 bits (86), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 25/41 (60%)

Query: 124 ILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVC 164
           +LVKG+VL+    HP MP+ V  A I   + ++E EK ++ 
Sbjct: 219 VLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEKPEIS 259



 Score = 35.8 bits (81), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 18/108 (16%)

Query: 498 SWIISGLHPRVITEGFTQARLKALEVLESL-------KITTPPSREILLDVARTSLRTKV 550
           S +   +HP +I EG+ +A  KALE+L  L        + +  +R+ L  +A T+L +K 
Sbjct: 109 SLLDQNIHPTIIIEGYKKAYTKALELLPQLGTRIDIRDLNSSVARDTLRKIAFTTLASKF 168

Query: 551 ERELADLLAEPNSVPSLRNSATV-------NSGFDAQDTLVKLQEACG 591
             E A+L    N +  +   A V       N G++    L+K+ +  G
Sbjct: 169 IAEGAEL----NKIIDMVIDAIVNVAEPLPNGGYNVSLDLIKIDKKKG 212


>sp|Q54TH8|TCPG_DICDI T-complex protein 1 subunit gamma OS=Dictyostelium discoideum
           GN=cct3 PE=1 SV=1
          Length = 530

 Score =  145 bits (365), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 164/340 (48%), Gaps = 41/340 (12%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           +++GV+LN    HP M + +KN  I+  + S+EY+K                        
Sbjct: 213 VIRGVMLNKDVTHPKMKRMIKNPRIVLLDCSLEYKKGE---------------------- 250

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
                  S  M D+T +   S       LLK  + Y+  +   + K  PD   +++   G
Sbjct: 251 -------SDTMVDITNEDDFSA------LLKIEEEYVQRICEDIIKLKPDLVFTEK---G 294

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFE-HVL 345
           +   +   F ++GI  LRR K+    R++   G T ++  + L+ + +G    +FE   +
Sbjct: 295 VSDLAQHFFVKKGITCLRRLKKSENNRIARISGATIVSRTDELQESDIGTGCGLFEIRKI 354

Query: 346 GEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFE 405
           G+E FTF+E+CK P++ TILL+G +K  L + +  + D L   +N + D  +VPG GA E
Sbjct: 355 GDEYFTFLEDCKEPKACTILLRGASKDILNEVERNLTDALNVARNIVLDPRLVPGGGAIE 414

Query: 406 VAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAP- 464
           +A   AL     +++G  +L  +A A++L  IPK +A N G +    L +L+      P 
Sbjct: 415 MALSQALSEKSKSIEGLHQLPYKALAQSLECIPKILAQNCGANTVKLLTELRAKHATNPT 474

Query: 465 -GVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISG 503
                GVD ++G +++    GI+D  +VK Q + + I S 
Sbjct: 475 ENYTYGVDGDNGTIVDMKQLGIWDTHSVKVQTLKTAIESA 514



 Score = 41.2 bits (95), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 7/74 (9%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE-----VNLKMHKFAPD 276
           + HP A  +   S A D+  GDGTTS V++  E+L  ++++I +       +K  + A D
Sbjct: 70  VTHPAAKSMIELSRAQDENVGDGTTSVVILAAEVLASSELFIEKKIHPHYIIKAFRMALD 129

Query: 277 CSTS--DRYRTGID 288
            S S  D+Y   ID
Sbjct: 130 DSLSIVDQYSVAID 143



 Score = 37.7 bits (86), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 4/51 (7%)

Query: 9   HKTPG----DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGS 55
            K PG    D  +++GV+L+    HP M + +KN  I+  + S+EY+K  S
Sbjct: 201 EKIPGGDISDCRVIRGVMLNKDVTHPKMKRMIKNPRIVLLDCSLEYKKGES 251



 Score = 37.4 bits (85), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 25/38 (65%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 162
           +++GV+LN    HP M + +KN  I+  + S+EY+K +
Sbjct: 213 VIRGVMLNKDVTHPKMKRMIKNPRIVLLDCSLEYKKGE 250



 Score = 35.4 bits (80), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 120
           GV+LN    HP M + +KN  I+  + S+EY+K +
Sbjct: 216 GVMLNKDVTHPKMKRMIKNPRIVLLDCSLEYKKGE 250


>sp|Q9V2T8|THSB_SULSO Thermosome subunit beta OS=Sulfolobus solfataricus (strain ATCC
           35092 / DSM 1617 / JCM 11322 / P2) GN=thsB PE=3 SV=2
          Length = 554

 Score =  142 bits (358), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 151/291 (51%), Gaps = 38/291 (13%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           LV G+V++    HP MPK ++NA I   + S+E EK       PE+        +I  PT
Sbjct: 221 LVYGIVVDKEVVHPGMPKRIENAKIALLDASLEVEK-------PELDAE----IRINDPT 269

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
                                    + + L++ +  + E   K+ K A   +     + G
Sbjct: 270 Q------------------------MHKFLEEEENILKE---KVDKIAATGANVVICQKG 302

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A++GI+A+RRAK+ ++E+L+ A GG  +++++ L    LGYA  V E  +G
Sbjct: 303 IDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVISNIDELTSQDLGYAALVEERKVG 362

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
           E+K  FVE  KNP+SV+IL++G  +  + +T+ A+RD L  + + I DG  V G GA E+
Sbjct: 363 EDKMVFVEGAKNPKSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEI 422

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQ 457
                L+ Y   V GK +L I+AYA A+  +   +A N+G D  D L++L+
Sbjct: 423 EIAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLR 473



 Score = 40.8 bits (94), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 25/39 (64%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEK 52
           D+ LV G+V+D    HP MPK ++NA I   + S+E EK
Sbjct: 218 DTQLVYGIVVDKEVVHPGMPKRIENAKIALLDASLEVEK 256



 Score = 38.9 bits (89), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 26/39 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           +QHPT  L+ + +   D+ T DGT + V++ GEL K+A+
Sbjct: 80  LQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAE 118



 Score = 37.0 bits (84), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 25/39 (64%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
           LV G+V++    HP MPK ++NA I   + S+E EK ++
Sbjct: 221 LVYGIVVDKEVVHPGMPKRIENAKIALLDASLEVEKPEL 259



 Score = 34.3 bits (77), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 23/36 (63%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           G+V++    HP MPK ++NA I   + S+E EK ++
Sbjct: 224 GIVVDKEVVHPGMPKRIENAKIALLDASLEVEKPEL 259


>sp|P28488|THSB_SULSH Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1
          Length = 552

 Score =  142 bits (358), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 151/291 (51%), Gaps = 38/291 (13%)

Query: 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPT 226
           LV G+V++    HP MPK ++NA I   + S+E EK       PE+        +I  PT
Sbjct: 221 LVYGIVVDKEVVHPGMPKRIENAKIALLDASLEVEK-------PELDAE----IRINDPT 269

Query: 227 ASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTG 286
                                    + + L++ +  + E   K+ K A   +     + G
Sbjct: 270 Q------------------------MHKFLEEEENILKE---KVDKIAATGANVVICQKG 302

Query: 287 IDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346
           ID  +    A++GI+A+RRAK+ ++E+L+ A GG  +++++ L    LGYA  V E  +G
Sbjct: 303 IDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVISNIDELTSQDLGYAALVEERKVG 362

Query: 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406
           E+K  FVE  KNP+SV+IL++G  +  + +T+ A+RD L  + + I DG  V G GA E+
Sbjct: 363 EDKMVFVEGAKNPKSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEI 422

Query: 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQ 457
                L+ Y   V GK +L I+AYA A+  +   +A N+G D  D L++L+
Sbjct: 423 EIAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLR 473



 Score = 40.8 bits (94), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 25/39 (64%)

Query: 14  DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEK 52
           D+ LV G+V+D    HP MPK ++NA I   + S+E EK
Sbjct: 218 DTQLVYGIVVDKEVVHPGMPKRIENAKIALLDASLEVEK 256



 Score = 38.9 bits (89), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 26/39 (66%)

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQAD 260
           +QHPT  L+ + +   D+ T DGT + V++ GEL K+A+
Sbjct: 80  LQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAE 118



 Score = 37.0 bits (84), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 25/39 (64%)

Query: 125 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 163
           LV G+V++    HP MPK ++NA I   + S+E EK ++
Sbjct: 221 LVYGIVVDKEVVHPGMPKRIENAKIALLDASLEVEKPEL 259



 Score = 34.3 bits (77), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 23/36 (63%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDV 121
           G+V++    HP MPK ++NA I   + S+E EK ++
Sbjct: 224 GIVVDKEVVHPGMPKRIENAKIALLDASLEVEKPEL 259


>sp|O24734|THSA_SULTO Thermosome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
           JCM 10545 / NBRC 100140 / 7) GN=thsA PE=1 SV=1
          Length = 559

 Score =  140 bits (354), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 164/337 (48%), Gaps = 42/337 (12%)

Query: 166 ILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHP 225
           +LV G+VL+    HP MP+ V+ A I   + ++E EK       PEIS    I +  Q  
Sbjct: 220 MLVHGLVLDKEVVHPGMPRRVEKAKIAVLDAALEVEK-------PEISAKISITSPEQ-- 270

Query: 226 TASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRT 285
                                     I   L +   Y+ ++  K+     +     +   
Sbjct: 271 --------------------------IKAFLDEEAKYLKDMVDKLASIGANVVICQK--- 301

Query: 286 GIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVL 345
           GID  +    A++GI+A+RR KR ++E+L  A G   ++S++   P  LGYA  V E  +
Sbjct: 302 GIDDVAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRV 361

Query: 346 GEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFE 405
           G +K  F+E  KNP++V ILL+G N   L + + ++ D L +++N +    +V G GA E
Sbjct: 362 GNDKMVFIEGAKNPKAVNILLRGSNDMALDEAERSINDALHSLRNVLMKPMIVAGGGAVE 421

Query: 406 VAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPG 465
                 L+ Y  +V GK +L I+ +AEAL  IP  +A  +G +   TL+ L+     A G
Sbjct: 422 TELALRLREYARSVGGKEQLAIEKFAEALEEIPMILAETAGMEPIQTLMDLR--AKHAKG 479

Query: 466 -VAVGVDVNSGEVLNPTSA-GIYDNLTVKRQIINSWI 500
            +  GVDV +G++ +   A  + + + VK Q++ S +
Sbjct: 480 LINAGVDVMNGKIADDMLALNVLEPVRVKAQVLKSAV 516



 Score = 40.0 bits (92), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 2   VELMEMKHKTPG---DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEK 52
           ++L+++  K  G   DS LV G+VLD    HP MP+ V+ A I   + ++E EK
Sbjct: 203 LDLIKIDKKKGGSIEDSMLVHGLVLDKEVVHPGMPRRVEKAKIAVLDAALEVEK 256



 Score = 38.5 bits (88), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 22/33 (66%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIG 253
           +IQHP A L+  A+ A D   GDGTTS V++ G
Sbjct: 70  EIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAG 102



 Score = 35.0 bits (79), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 25/41 (60%)

Query: 124 ILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVC 164
           +LV G+VL+    HP MP+ V+ A I   + ++E EK ++ 
Sbjct: 220 MLVHGLVLDKEVVHPGMPRRVEKAKIAVLDAALEVEKPEIS 260


>sp|Q4R963|TCPG_MACFA T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3
           PE=2 SV=1
          Length = 545

 Score =  135 bits (340), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 183/397 (46%), Gaps = 57/397 (14%)

Query: 100 KSVKNAHILTCNISMEYEKSDVCIILVKGVVLN-HGARHPDMPKSVKNAHILTCNISMEY 158
           K++     L CNI+++          VK V    +G +  D+ K  K   I    I    
Sbjct: 163 KAISRWSSLACNIALDA---------VKTVQFEENGRKEIDIKKYAKVEKIPGGIIE--- 210

Query: 159 EKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGI 218
              D C++  +GV++N    HP M + +KN  I+  + S+EY+K   G  Q +I +    
Sbjct: 211 ---DSCVL--RGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKK---GESQTDIEI---- 258

Query: 219 ANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCS 278
                           T  +D T             +L+  + YI ++   + +  PD  
Sbjct: 259 ----------------TREEDFT------------RILQMEEEYIQQLCEDIIQLKPDVV 290

Query: 279 TSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAG 338
            +++   GI   +     R  I A+RR ++ +  R++ ACG   ++  E L    +G   
Sbjct: 291 ITEK---GISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGA 347

Query: 339 SVFE-HVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAV 397
            + E   +G+E FTF+ ECK+P++ TILL+G +K  L++ +  ++D ++  +N + D  +
Sbjct: 348 GLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQL 407

Query: 398 VPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQ 457
           VPG GA E+A  HAL      + G  +   +A A+AL +IP+T+  N G      L  L+
Sbjct: 408 VPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLR 467

Query: 458 EACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQ 494
               +      GV+  +G +++    GI++ L VK Q
Sbjct: 468 AKHTQENCETWGVNGETGTLVDVKELGIWEPLAVKLQ 504



 Score = 42.0 bits (97), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)

Query: 9   HKTPG----DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGS 55
            K PG    DSC+++GV+++    HP M + +KN  I+  + S+EY+K  S
Sbjct: 202 EKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGES 252



 Score = 37.7 bits (86), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 7/68 (10%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTS 280
           Q+QHP A  +   S   D+  G GTTS +++ GE+L  A+ ++ +   +MH   P    S
Sbjct: 71  QVQHPAAKSMIEISRTQDEEVGGGTTSVIILAGEMLSVAEHFLEQ---QMH---PTVVIS 124

Query: 281 DRYRTGID 288
             YR  +D
Sbjct: 125 -AYRKALD 131



 Score = 33.1 bits (74), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 120
           GV++N    HP M + +KN  I+  + S+EY+K +
Sbjct: 217 GVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGE 251


>sp|Q3T0K2|TCPG_BOVIN T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=1 SV=1
          Length = 545

 Score =  135 bits (339), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 41/334 (12%)

Query: 162 DVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQ 221
           D C++  +GV++N    HP M + +KN  I+  + S+EY+K   G  Q +I +       
Sbjct: 211 DSCVL--RGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKK---GESQTDIEI------- 258

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSD 281
                        T  +D T             +L+  + YI ++   + +  PD   ++
Sbjct: 259 -------------TREEDFT------------RILQMEEEYIQQLCEDIIQLKPDVVITE 293

Query: 282 RYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVF 341
           +   GI   +     R  I A+RR ++ +  R++ ACG   ++  E L    +G    + 
Sbjct: 294 K---GISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREEDVGTGAGLL 350

Query: 342 E-HVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPG 400
           E   +G+E FTF+ ECK+P++ TILL+G +K  L++ +  ++D ++  +N + D  +VPG
Sbjct: 351 EIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPG 410

Query: 401 AGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEAC 460
            GA E+A  HAL      + G  +   +A A+AL +IP+T+  N G      L  L+   
Sbjct: 411 GGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKH 470

Query: 461 GEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQ 494
            +      GV+  +G +++    GI++ L VK Q
Sbjct: 471 TQENCETWGVNGETGTLVDMKELGIWEPLAVKLQ 504



 Score = 42.0 bits (97), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)

Query: 9   HKTPG----DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGS 55
            K PG    DSC+++GV+++    HP M + +KN  I+  + S+EY+K  S
Sbjct: 202 EKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGES 252



 Score = 40.8 bits (94), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 7/68 (10%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTS 280
           Q+QHP A  +   S   D+  GDGTTS +++ GE+L  A+ ++ +   +MH   P    S
Sbjct: 71  QVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQ---QMH---PTVVIS 124

Query: 281 DRYRTGID 288
             YR  +D
Sbjct: 125 -AYRKALD 131



 Score = 36.2 bits (82), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 120 DVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 162
           D C++  +GV++N    HP M + +KN  I+  + S+EY+K +
Sbjct: 211 DSCVL--RGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGE 251



 Score = 33.1 bits (74), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 120
           GV++N    HP M + +KN  I+  + S+EY+K +
Sbjct: 217 GVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGE 251


>sp|P50143|TCPG_XENLA T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2
           SV=2
          Length = 547

 Score =  134 bits (337), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 159/334 (47%), Gaps = 41/334 (12%)

Query: 162 DVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQ 221
           D C++  +GV++N    HP M + +KN  I+  + S+EY+K   G  Q EI +       
Sbjct: 210 DSCVL--RGVMVNKDVTHPKMRRLIKNPRIILLDCSLEYKK---GESQTEIEI------- 257

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSD 281
                        T  +D               +L+  + YI +V   + +  PD   ++
Sbjct: 258 -------------TREEDF------------ARILQMEEEYIQQVCEDIIRLKPDVVITE 292

Query: 282 RYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVF 341
           +   GI   +     +  I A+RR ++ +  R++ ACG    +  + L    +G    +F
Sbjct: 293 K---GISDLAQHYLVKANITAVRRVRKTDNNRIARACGARIASRTDELREEDVGTGAGLF 349

Query: 342 E-HVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPG 400
           E   +G+E FTF+ +CK+P++ TI+L+G +K  LA+ +  ++D ++  +N + D  +VPG
Sbjct: 350 EIKKIGDEYFTFITDCKDPKACTIVLRGASKEILAEVERNLQDAMQVCRNVVIDPYLVPG 409

Query: 401 AGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEAC 460
            GA E++  H L     T+ G  +   +A A+AL +IP+T+  N G      L  L+   
Sbjct: 410 GGASEMSVAHILTEKSKTMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRILTSLRAKH 469

Query: 461 GEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQ 494
            +      GVD  +G + +    GI++ L VK Q
Sbjct: 470 TQEGCQTWGVDGEAGVLADMKELGIWEPLAVKLQ 503



 Score = 42.7 bits (99), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)

Query: 9   HKTPG----DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGS 55
            K PG    DSC+++GV+++    HP M + +KN  I+  + S+EY+K  S
Sbjct: 201 EKIPGGIIEDSCVLRGVMVNKDVTHPKMRRLIKNPRIILLDCSLEYKKGES 251



 Score = 41.2 bits (95), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 7/68 (10%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTS 280
           Q+QHP A  +   S   D+  GDGTTS +++ GE+L  A+ ++ +   +MH   P    S
Sbjct: 70  QVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEQFLEQ---QMH---PTVIIS 123

Query: 281 DRYRTGID 288
             YR  +D
Sbjct: 124 -AYRKALD 130



 Score = 36.6 bits (83), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 120 DVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 162
           D C++  +GV++N    HP M + +KN  I+  + S+EY+K +
Sbjct: 210 DSCVL--RGVMVNKDVTHPKMRRLIKNPRIILLDCSLEYKKGE 250



 Score = 33.9 bits (76), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 120
           GV++N    HP M + +KN  I+  + S+EY+K +
Sbjct: 216 GVMVNKDVTHPKMRRLIKNPRIILLDCSLEYKKGE 250


>sp|P49368|TCPG_HUMAN T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4
          Length = 545

 Score =  133 bits (334), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 161/334 (48%), Gaps = 41/334 (12%)

Query: 162 DVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQ 221
           D C++  +GV++N    HP M + +KN  I+  + S+EY+K   G  Q +I +       
Sbjct: 211 DSCVL--RGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKK---GESQTDIEI------- 258

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSD 281
                        T  +D T             +L+  + YI ++   + +  PD   ++
Sbjct: 259 -------------TREEDFT------------RILQMEEEYIQQLCEDIIQLKPDVVITE 293

Query: 282 RYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVF 341
           +   GI   +     R  I A+RR ++ +  R++ ACG   ++  E L    +G    + 
Sbjct: 294 K---GISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLL 350

Query: 342 E-HVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPG 400
           E   +G+E FTF+ +CK+P++ TILL+G +K  L++ +  ++D ++  +N + D  +VPG
Sbjct: 351 EIKKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPG 410

Query: 401 AGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEAC 460
            GA E+A  HAL      + G  +   +A A+AL +IP+T+  N G      L  L+   
Sbjct: 411 GGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKH 470

Query: 461 GEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQ 494
            +      GV+  +G +++    GI++ L VK Q
Sbjct: 471 TQENCETWGVNGETGTLVDMKELGIWEPLAVKLQ 504



 Score = 42.0 bits (97), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)

Query: 9   HKTPG----DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGS 55
            K PG    DSC+++GV+++    HP M + +KN  I+  + S+EY+K  S
Sbjct: 202 EKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGES 252



 Score = 40.8 bits (94), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 7/68 (10%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTS 280
           Q+QHP A  +   S   D+  GDGTTS +++ GE+L  A+ ++ +   +MH   P    S
Sbjct: 71  QVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQ---QMH---PTVVIS 124

Query: 281 DRYRTGID 288
             YR  +D
Sbjct: 125 -AYRKALD 131



 Score = 35.8 bits (81), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 120 DVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 162
           D C++  +GV++N    HP M + +KN  I+  + S+EY+K +
Sbjct: 211 DSCVL--RGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGE 251



 Score = 33.1 bits (74), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 120
           GV++N    HP M + +KN  I+  + S+EY+K +
Sbjct: 217 GVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGE 251


>sp|Q5NVF9|TCPG_PONAB T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1
          Length = 545

 Score =  133 bits (334), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 161/334 (48%), Gaps = 41/334 (12%)

Query: 162 DVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQ 221
           D C++  +GV++N    HP M + +KN  I+  + S+EY+K   G  Q +I +       
Sbjct: 211 DSCVL--RGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKK---GESQTDIEI------- 258

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSD 281
                        T  +D T             +L+  + YI ++   + +  PD   ++
Sbjct: 259 -------------TREEDFT------------RILQMEEEYIQQLCEDIIQLKPDVVITE 293

Query: 282 RYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVF 341
           +   GI   +     R  I A+RR ++ +  R++ ACG   ++  E L    +G    + 
Sbjct: 294 K---GISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLL 350

Query: 342 E-HVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPG 400
           E   +G+E FTF+ +CK+P++ TILL+G +K  L++ +  ++D ++  +N + D  +VPG
Sbjct: 351 EIKKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPG 410

Query: 401 AGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEAC 460
            GA E+A  HAL      + G  +   +A A+AL +IP+T+  N G      L  L+   
Sbjct: 411 GGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKH 470

Query: 461 GEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQ 494
            +      GV+  +G +++    GI++ L VK Q
Sbjct: 471 TQENCETWGVNGETGTLVDMKELGIWEPLAVKLQ 504



 Score = 42.0 bits (97), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)

Query: 9   HKTPG----DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGS 55
            K PG    DSC+++GV+++    HP M + +KN  I+  + S+EY+K  S
Sbjct: 202 EKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGES 252



 Score = 41.2 bits (95), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 7/68 (10%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTS 280
           Q+QHP A  +   S   D+  GDGTTS +++ GE+L  A+ ++ +   +MH   P    S
Sbjct: 71  QVQHPAAKSMVEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQ---QMH---PTVVIS 124

Query: 281 DRYRTGID 288
             YR  +D
Sbjct: 125 -AYRKALD 131



 Score = 35.8 bits (81), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 120 DVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 162
           D C++  +GV++N    HP M + +KN  I+  + S+EY+K +
Sbjct: 211 DSCVL--RGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGE 251



 Score = 33.1 bits (74), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 120
           GV++N    HP M + +KN  I+  + S+EY+K +
Sbjct: 217 GVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGE 251


>sp|Q6P502|TCPG_RAT T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1
           SV=1
          Length = 545

 Score =  132 bits (333), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 161/334 (48%), Gaps = 41/334 (12%)

Query: 162 DVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQ 221
           D C++  +GV++N    HP M + +KN  I+  + S+EY+K   G  Q +I +       
Sbjct: 211 DSCVL--RGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKK---GESQTDIEI------- 258

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSD 281
                        T  +D T             +L+  + YI ++   + +  PD   ++
Sbjct: 259 -------------TREEDFT------------RILQMEEEYIQQLCEDIIQLKPDVVITE 293

Query: 282 RYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVF 341
           +   GI   +     R  + A+RR ++ +  R++ ACG   ++  E L    +G    + 
Sbjct: 294 K---GISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLL 350

Query: 342 E-HVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPG 400
           E   +G+E FTF+ +CK+P++ TILL+G +K  L++ +  ++D ++  +N + D  +VPG
Sbjct: 351 EIKKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPG 410

Query: 401 AGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEAC 460
            GA E+A  HAL      + G  +   +A A+AL +IP+T+  N G      L  L+   
Sbjct: 411 GGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKH 470

Query: 461 GEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQ 494
            +      GV+  +G +++    GI++ L VK Q
Sbjct: 471 TQENCETWGVNGETGTLVDMKELGIWEPLAVKLQ 504



 Score = 42.7 bits (99), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 7/82 (8%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE-----VNLKMHKFAP 275
           Q+QHP A  +   S   D+  GDGTTS +++ GE+L  A+ ++ +     V +  ++ A 
Sbjct: 71  QVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMAL 130

Query: 276 D--CSTSDRYRTGIDPQSLDLF 295
           D   ST  +  T +D  + D+ 
Sbjct: 131 DDMVSTLKKISTPVDVNNRDMM 152



 Score = 42.0 bits (97), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)

Query: 9   HKTPG----DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGS 55
            K PG    DSC+++GV+++    HP M + +KN  I+  + S+EY+K  S
Sbjct: 202 EKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGES 252



 Score = 36.2 bits (82), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 120 DVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 162
           D C++  +GV++N    HP M + +KN  I+  + S+EY+K +
Sbjct: 211 DSCVL--RGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGE 251



 Score = 33.1 bits (74), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 120
           GV++N    HP M + +KN  I+  + S+EY+K +
Sbjct: 217 GVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGE 251


>sp|P80318|TCPG_MOUSE T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1
          Length = 545

 Score =  132 bits (333), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 161/334 (48%), Gaps = 41/334 (12%)

Query: 162 DVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQ 221
           D C++  +GV++N    HP M + +KN  I+  + S+EY+K   G  Q +I +       
Sbjct: 211 DSCVL--RGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKK---GESQTDIEI------- 258

Query: 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSD 281
                        T  +D T             +L+  + YI ++   + +  PD   ++
Sbjct: 259 -------------TREEDFT------------RILQMEEEYIHQLCEDIIQLKPDVVITE 293

Query: 282 RYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVF 341
           +   GI   +     R  + A+RR ++ +  R++ ACG   ++  E L    +G    + 
Sbjct: 294 K---GISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLL 350

Query: 342 E-HVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPG 400
           E   +G+E FTF+ +CK+P++ TILL+G +K  L++ +  ++D ++  +N + D  +VPG
Sbjct: 351 EIKKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPG 410

Query: 401 AGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEAC 460
            GA E+A  HAL      + G  +   +A A+AL +IP+T+  N G      L  L+   
Sbjct: 411 GGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKH 470

Query: 461 GEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQ 494
            +      GV+  +G +++    GI++ L VK Q
Sbjct: 471 TQESCETWGVNGETGTLVDMKELGIWEPLAVKLQ 504



 Score = 42.0 bits (97), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)

Query: 9   HKTPG----DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGS 55
            K PG    DSC+++GV+++    HP M + +KN  I+  + S+EY+K  S
Sbjct: 202 EKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGES 252



 Score = 40.8 bits (94), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 7/68 (10%)

Query: 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTS 280
           Q+QHP A  +   S   D+  GDGTTS +++ GE+L  A+ ++ +   +MH   P    S
Sbjct: 71  QVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQ---QMH---PTVVIS 124

Query: 281 DRYRTGID 288
             YR  +D
Sbjct: 125 -AYRMALD 131



 Score = 36.2 bits (82), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 120 DVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 162
           D C++  +GV++N    HP M + +KN  I+  + S+EY+K +
Sbjct: 211 DSCVL--RGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGE 251



 Score = 33.1 bits (74), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 86  GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD 120
           GV++N    HP M + +KN  I+  + S+EY+K +
Sbjct: 217 GVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGE 251


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.132    0.384 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 234,491,453
Number of Sequences: 539616
Number of extensions: 9686722
Number of successful extensions: 27904
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 282
Number of HSP's that attempted gapping in prelim test: 26605
Number of HSP's gapped (non-prelim): 1583
length of query: 629
length of database: 191,569,459
effective HSP length: 124
effective length of query: 505
effective length of database: 124,657,075
effective search space: 62951822875
effective search space used: 62951822875
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)